Multiple sequence alignment - TraesCS4D01G239500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G239500 chr4D 100.000 4395 0 0 1 4395 401530461 401534855 0.000000e+00 8117.0
1 TraesCS4D01G239500 chr4D 87.702 309 36 2 424 732 112969486 112969792 4.180000e-95 359.0
2 TraesCS4D01G239500 chr4A 94.786 2762 104 12 1 2734 59281592 59284341 0.000000e+00 4266.0
3 TraesCS4D01G239500 chr4A 80.115 1921 240 84 920 2763 666940701 666938846 0.000000e+00 1301.0
4 TraesCS4D01G239500 chr4A 87.582 1071 75 16 2787 3826 59284824 59285867 0.000000e+00 1188.0
5 TraesCS4D01G239500 chr4A 81.639 305 47 7 3060 3362 666938567 666938270 1.220000e-60 244.0
6 TraesCS4D01G239500 chr4A 88.202 178 19 2 2877 3053 666938789 666938613 1.240000e-50 211.0
7 TraesCS4D01G239500 chr4A 100.000 33 0 0 2731 2763 59284791 59284823 1.320000e-05 62.1
8 TraesCS4D01G239500 chr4B 93.452 2520 109 16 1 2492 496546615 496549106 0.000000e+00 3688.0
9 TraesCS4D01G239500 chr4B 97.605 668 12 4 2493 3157 496549206 496549872 0.000000e+00 1142.0
10 TraesCS4D01G239500 chr4B 94.624 186 10 0 3207 3392 496549992 496550177 5.560000e-74 289.0
11 TraesCS4D01G239500 chr4B 86.275 153 12 5 3492 3636 496550266 496550417 1.640000e-34 158.0
12 TraesCS4D01G239500 chr2D 87.789 1990 166 40 811 2763 647967838 647969787 0.000000e+00 2257.0
13 TraesCS4D01G239500 chr2D 79.533 557 98 9 1684 2228 107865727 107866279 2.480000e-102 383.0
14 TraesCS4D01G239500 chr2D 87.658 316 37 2 424 739 314367406 314367093 2.500000e-97 366.0
15 TraesCS4D01G239500 chr2D 88.462 286 21 6 2872 3157 647969821 647970094 7.040000e-88 335.0
16 TraesCS4D01G239500 chr2D 81.690 426 55 16 1 420 648101927 648102335 2.530000e-87 333.0
17 TraesCS4D01G239500 chr2D 79.496 278 14 14 1 263 648119991 648120240 1.640000e-34 158.0
18 TraesCS4D01G239500 chr2D 91.919 99 8 0 275 373 609296396 609296494 5.930000e-29 139.0
19 TraesCS4D01G239500 chr2D 96.923 65 2 0 3525 3589 647970636 647970700 4.650000e-20 110.0
20 TraesCS4D01G239500 chr2D 91.304 46 4 0 374 419 609208868 609208913 3.670000e-06 63.9
21 TraesCS4D01G239500 chr2D 91.304 46 4 0 374 419 609218996 609219041 3.670000e-06 63.9
22 TraesCS4D01G239500 chr2D 91.304 46 4 0 374 419 609227020 609227065 3.670000e-06 63.9
23 TraesCS4D01G239500 chr2D 91.304 46 4 0 374 419 609301491 609301536 3.670000e-06 63.9
24 TraesCS4D01G239500 chr2D 89.130 46 5 0 374 419 609222876 609222921 1.710000e-04 58.4
25 TraesCS4D01G239500 chr2B 86.581 2027 168 50 799 2763 781832867 781830883 0.000000e+00 2141.0
26 TraesCS4D01G239500 chr2B 85.010 487 48 11 2872 3357 781830849 781830387 5.150000e-129 472.0
27 TraesCS4D01G239500 chr2B 88.571 175 11 7 2872 3039 781826379 781826207 2.070000e-48 204.0
28 TraesCS4D01G239500 chr2B 88.660 97 7 1 3496 3588 781830253 781830157 9.990000e-22 115.0
29 TraesCS4D01G239500 chr2B 84.337 83 8 2 3319 3400 781826021 781825943 4.710000e-10 76.8
30 TraesCS4D01G239500 chr2B 91.304 46 4 0 374 419 743227493 743227538 3.670000e-06 63.9
31 TraesCS4D01G239500 chrUn 91.032 1182 74 14 1601 2763 31374478 31373310 0.000000e+00 1567.0
32 TraesCS4D01G239500 chrUn 85.406 788 75 25 799 1562 31375256 31374485 0.000000e+00 782.0
33 TraesCS4D01G239500 chrUn 87.680 487 47 6 2872 3357 31373276 31372802 4.970000e-154 555.0
34 TraesCS4D01G239500 chrUn 81.401 414 52 19 12 421 31327660 31327268 9.180000e-82 315.0
35 TraesCS4D01G239500 chrUn 91.753 97 4 1 3496 3588 31372670 31372574 9.920000e-27 132.0
36 TraesCS4D01G239500 chr7A 82.041 1264 154 36 1197 2433 54838554 54837337 0.000000e+00 1009.0
37 TraesCS4D01G239500 chr7A 79.153 614 69 27 2466 3053 54834078 54833498 1.930000e-98 370.0
38 TraesCS4D01G239500 chr7A 83.117 308 43 7 3057 3362 54833455 54833155 5.600000e-69 272.0
39 TraesCS4D01G239500 chr7A 81.707 82 13 2 3724 3805 519169845 519169766 2.840000e-07 67.6
40 TraesCS4D01G239500 chr7D 82.403 932 96 33 1759 2671 52333415 52332533 0.000000e+00 750.0
41 TraesCS4D01G239500 chr7D 77.208 566 78 24 1199 1754 52333984 52333460 2.590000e-72 283.0
42 TraesCS4D01G239500 chr7D 82.468 308 45 6 3057 3362 52332163 52331863 1.210000e-65 261.0
43 TraesCS4D01G239500 chr7D 83.420 193 29 3 1219 1409 101552394 101552203 4.520000e-40 176.0
44 TraesCS4D01G239500 chr7D 90.217 92 9 0 1 92 567809154 567809245 2.150000e-23 121.0
45 TraesCS4D01G239500 chr5B 87.342 316 38 2 424 739 34043209 34043522 1.160000e-95 361.0
46 TraesCS4D01G239500 chr3D 87.342 316 37 2 424 739 402685987 402685675 4.180000e-95 359.0
47 TraesCS4D01G239500 chr6D 87.025 316 39 2 424 739 303614030 303614343 5.410000e-94 355.0
48 TraesCS4D01G239500 chr2A 86.875 320 36 4 424 739 4831040 4831357 1.940000e-93 353.0
49 TraesCS4D01G239500 chr2A 91.304 46 4 0 374 419 741083742 741083787 3.670000e-06 63.9
50 TraesCS4D01G239500 chr6B 86.520 319 42 1 424 742 276771479 276771162 2.520000e-92 350.0
51 TraesCS4D01G239500 chr7B 85.119 168 22 3 1227 1393 159184012 159183847 7.560000e-38 169.0
52 TraesCS4D01G239500 chr5D 90.217 92 9 0 1 92 8377410 8377319 2.150000e-23 121.0
53 TraesCS4D01G239500 chr5D 89.130 92 10 0 1 92 78436329 78436238 9.990000e-22 115.0
54 TraesCS4D01G239500 chr5D 89.011 91 10 0 1 91 403753276 403753186 3.590000e-21 113.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G239500 chr4D 401530461 401534855 4394 False 8117.000000 8117 100.000000 1 4395 1 chr4D.!!$F2 4394
1 TraesCS4D01G239500 chr4A 59281592 59285867 4275 False 1838.700000 4266 94.122667 1 3826 3 chr4A.!!$F1 3825
2 TraesCS4D01G239500 chr4A 666938270 666940701 2431 True 585.333333 1301 83.318667 920 3362 3 chr4A.!!$R1 2442
3 TraesCS4D01G239500 chr4B 496546615 496550417 3802 False 1319.250000 3688 92.989000 1 3636 4 chr4B.!!$F1 3635
4 TraesCS4D01G239500 chr2D 647967838 647970700 2862 False 900.666667 2257 91.058000 811 3589 3 chr2D.!!$F9 2778
5 TraesCS4D01G239500 chr2D 107865727 107866279 552 False 383.000000 383 79.533000 1684 2228 1 chr2D.!!$F1 544
6 TraesCS4D01G239500 chr2B 781825943 781832867 6924 True 601.760000 2141 86.631800 799 3588 5 chr2B.!!$R1 2789
7 TraesCS4D01G239500 chrUn 31372574 31375256 2682 True 759.000000 1567 88.967750 799 3588 4 chrUn.!!$R2 2789
8 TraesCS4D01G239500 chr7A 54833155 54838554 5399 True 550.333333 1009 81.437000 1197 3362 3 chr7A.!!$R2 2165
9 TraesCS4D01G239500 chr7D 52331863 52333984 2121 True 431.333333 750 80.693000 1199 3362 3 chr7D.!!$R2 2163

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
938 973 1.007734 CGGCGGTGCTATATCACGT 60.008 57.895 0.00 0.00 37.83 4.49 F
1011 1061 0.107703 GGACGAAGATGGTGGCATCA 60.108 55.000 1.35 1.35 34.19 3.07 F
1542 1630 0.391927 GTAAGTGCCCACGCCACATA 60.392 55.000 0.00 0.00 36.20 2.29 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2116 2301 3.115554 GTGCAAACTTTTCACGAAGCAT 58.884 40.909 0.0 0.0 32.98 3.79 R
2926 7028 6.012245 TGGATATTGATGATACTGCCCTCATT 60.012 38.462 0.0 0.0 32.36 2.57 R
3474 7792 0.041090 ACGGGGAGGGATGCAAAAAT 59.959 50.000 0.0 0.0 0.00 1.82 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
86 87 3.055719 CCGCACTCCGCACCATTT 61.056 61.111 0.00 0.00 42.60 2.32
149 150 3.367025 CGTAGCAAGTTAGCAAGGTACAC 59.633 47.826 0.00 0.00 35.36 2.90
205 225 4.641989 GGGAACATGAAGATGCATACAGTT 59.358 41.667 0.00 7.22 32.14 3.16
230 250 3.057736 CCTGCTTATACTGCCATTGATGC 60.058 47.826 0.00 0.00 0.00 3.91
245 265 6.517605 CCATTGATGCCAATTCATGTTCATA 58.482 36.000 0.00 0.00 40.81 2.15
297 317 9.575783 CAAATTGATGTCAATCATGTTCATGTA 57.424 29.630 8.56 1.31 45.06 2.29
369 396 3.696281 TGAGTAATTGATGCCATTGCG 57.304 42.857 0.00 0.00 41.78 4.85
408 435 7.896383 TTTGGAATATATTTCCTCAACTGGG 57.104 36.000 14.07 0.00 39.31 4.45
465 492 8.617290 ACAAACTTTATTCAACCGAGATAACT 57.383 30.769 0.00 0.00 0.00 2.24
484 511 3.861840 ACTGATACATCGTTTGTGAGGG 58.138 45.455 4.39 0.00 39.48 4.30
583 610 5.121768 TGCGCAACCTTATTTTCTTCTCTAC 59.878 40.000 8.16 0.00 0.00 2.59
621 649 7.406104 ACCTAGAAATAGGAAAATCACAAGCT 58.594 34.615 8.29 0.00 39.60 3.74
938 973 1.007734 CGGCGGTGCTATATCACGT 60.008 57.895 0.00 0.00 37.83 4.49
995 1045 1.744741 GCAGCTTCAGCAGGAGGAC 60.745 63.158 0.75 0.00 45.16 3.85
1011 1061 0.107703 GGACGAAGATGGTGGCATCA 60.108 55.000 1.35 1.35 34.19 3.07
1144 1204 1.296715 GTGAGGCCGAATGTGACCT 59.703 57.895 0.00 0.00 34.43 3.85
1222 1306 2.371841 TGTATGTCTGGTTGTGGCTCTT 59.628 45.455 0.00 0.00 0.00 2.85
1318 1403 2.469516 GGCAAATCAGGTACCCGCG 61.470 63.158 8.74 0.00 0.00 6.46
1539 1627 1.599797 AAGTAAGTGCCCACGCCAC 60.600 57.895 0.00 0.00 36.20 5.01
1540 1628 2.281208 GTAAGTGCCCACGCCACA 60.281 61.111 0.00 0.00 36.20 4.17
1541 1629 1.674322 GTAAGTGCCCACGCCACAT 60.674 57.895 0.00 0.00 36.20 3.21
1542 1630 0.391927 GTAAGTGCCCACGCCACATA 60.392 55.000 0.00 0.00 36.20 2.29
1545 1642 0.544223 AGTGCCCACGCCACATAATA 59.456 50.000 0.00 0.00 36.20 0.98
2116 2301 2.554893 GTTCGGCCTAAAATGGTGTCAA 59.445 45.455 0.00 0.00 0.00 3.18
2445 5883 7.381948 GTGCACACAAGATGATGTTTGATAAAA 59.618 33.333 13.17 0.00 33.80 1.52
2538 6086 3.885297 CCACAAACTGGAACTGACATTCT 59.115 43.478 0.00 0.00 43.95 2.40
2615 6163 4.588951 TCTGACAGAACAGTTGGTCATACT 59.411 41.667 14.68 0.00 39.33 2.12
2673 6235 4.156455 TGGCTATGAAATCAAGGAGACC 57.844 45.455 0.00 0.00 0.00 3.85
2821 6858 6.141462 GCAGAGAGAACATCTTTGAAAACTG 58.859 40.000 0.04 0.00 41.62 3.16
2926 7028 4.705991 TCATATTTGGCATTGTGCTCAAGA 59.294 37.500 7.35 0.00 44.28 3.02
3055 7198 5.878116 TGGTACCTTTTCAAGTCATATTCGG 59.122 40.000 14.36 0.00 0.00 4.30
3127 7271 6.183361 ACAATAGGGCATCAATACTCCTTCAT 60.183 38.462 0.00 0.00 0.00 2.57
3166 7473 5.184864 TCCCATTGTGATTTAGTTGCGAAAT 59.815 36.000 0.00 0.00 0.00 2.17
3219 7528 1.123861 AAGCTGGTGTCTGGCTCAGA 61.124 55.000 7.22 1.25 38.25 3.27
3252 7561 6.630071 CCGAGTTCAACCCATGATTTATTTT 58.370 36.000 0.00 0.00 38.03 1.82
3291 7600 3.753272 ACTGACCATTTACATGTGCAGTC 59.247 43.478 9.11 8.72 37.92 3.51
3300 7609 2.532532 ATGTGCAGTCACCAGCCCT 61.533 57.895 0.00 0.00 42.46 5.19
3309 7618 1.126948 TCACCAGCCCTGATGACACA 61.127 55.000 0.00 0.00 0.00 3.72
3392 7704 4.430388 TGTTCTCCACACCCCCTT 57.570 55.556 0.00 0.00 0.00 3.95
3397 7710 1.074951 CTCCACACCCCCTTGAACC 59.925 63.158 0.00 0.00 0.00 3.62
3400 7713 1.137594 CCACACCCCCTTGAACCCTA 61.138 60.000 0.00 0.00 0.00 3.53
3401 7714 0.774908 CACACCCCCTTGAACCCTAA 59.225 55.000 0.00 0.00 0.00 2.69
3402 7715 1.146152 CACACCCCCTTGAACCCTAAA 59.854 52.381 0.00 0.00 0.00 1.85
3403 7716 1.146359 ACACCCCCTTGAACCCTAAAC 59.854 52.381 0.00 0.00 0.00 2.01
3404 7717 1.427753 CACCCCCTTGAACCCTAAACT 59.572 52.381 0.00 0.00 0.00 2.66
3405 7718 2.149556 ACCCCCTTGAACCCTAAACTT 58.850 47.619 0.00 0.00 0.00 2.66
3406 7719 2.109480 ACCCCCTTGAACCCTAAACTTC 59.891 50.000 0.00 0.00 0.00 3.01
3407 7720 2.556782 CCCCCTTGAACCCTAAACTTCC 60.557 54.545 0.00 0.00 0.00 3.46
3408 7721 2.378886 CCCCTTGAACCCTAAACTTCCT 59.621 50.000 0.00 0.00 0.00 3.36
3409 7722 3.561528 CCCCTTGAACCCTAAACTTCCTC 60.562 52.174 0.00 0.00 0.00 3.71
3410 7723 3.073946 CCCTTGAACCCTAAACTTCCTCA 59.926 47.826 0.00 0.00 0.00 3.86
3411 7724 4.327680 CCTTGAACCCTAAACTTCCTCAG 58.672 47.826 0.00 0.00 0.00 3.35
3412 7725 4.202472 CCTTGAACCCTAAACTTCCTCAGT 60.202 45.833 0.00 0.00 37.30 3.41
3413 7726 5.012768 CCTTGAACCCTAAACTTCCTCAGTA 59.987 44.000 0.00 0.00 32.94 2.74
3414 7727 5.740290 TGAACCCTAAACTTCCTCAGTAG 57.260 43.478 0.00 0.00 32.94 2.57
3415 7728 5.399991 TGAACCCTAAACTTCCTCAGTAGA 58.600 41.667 0.00 0.00 32.94 2.59
3416 7729 6.023603 TGAACCCTAAACTTCCTCAGTAGAT 58.976 40.000 0.00 0.00 32.94 1.98
3417 7730 6.154706 TGAACCCTAAACTTCCTCAGTAGATC 59.845 42.308 0.00 0.00 32.94 2.75
3418 7731 5.844601 ACCCTAAACTTCCTCAGTAGATCT 58.155 41.667 0.00 0.00 32.94 2.75
3419 7732 5.894964 ACCCTAAACTTCCTCAGTAGATCTC 59.105 44.000 0.00 0.00 32.94 2.75
3420 7733 5.303333 CCCTAAACTTCCTCAGTAGATCTCC 59.697 48.000 0.00 0.00 32.94 3.71
3421 7734 5.303333 CCTAAACTTCCTCAGTAGATCTCCC 59.697 48.000 0.00 0.00 32.94 4.30
3422 7735 4.618378 AACTTCCTCAGTAGATCTCCCT 57.382 45.455 0.00 0.00 32.94 4.20
3423 7736 3.909732 ACTTCCTCAGTAGATCTCCCTG 58.090 50.000 13.61 13.61 31.97 4.45
3424 7737 3.270960 ACTTCCTCAGTAGATCTCCCTGT 59.729 47.826 17.38 0.65 31.97 4.00
3425 7738 4.264623 ACTTCCTCAGTAGATCTCCCTGTT 60.265 45.833 17.38 0.00 31.97 3.16
3433 7746 3.971245 AGATCTCCCTGTTCACTGTTC 57.029 47.619 0.00 0.00 0.00 3.18
3434 7747 3.242867 AGATCTCCCTGTTCACTGTTCA 58.757 45.455 0.00 0.00 0.00 3.18
3471 7789 4.773149 AGTAGATCTCCCTTTGAACTCGTT 59.227 41.667 0.00 0.00 0.00 3.85
3672 8606 3.378427 AGTTGGTGAGTGAGAGTTTTTGC 59.622 43.478 0.00 0.00 0.00 3.68
3686 11179 3.933332 AGTTTTTGCGTACCTAGCAGATC 59.067 43.478 0.00 0.00 46.01 2.75
3689 11182 0.744874 TGCGTACCTAGCAGATCCAC 59.255 55.000 0.00 0.00 40.01 4.02
3701 11194 3.071479 GCAGATCCACGGAGTTTTGTTA 58.929 45.455 0.00 0.00 41.61 2.41
3708 11201 4.095185 TCCACGGAGTTTTGTTAGTGTTTG 59.905 41.667 0.00 0.00 41.61 2.93
3713 11206 5.032220 GGAGTTTTGTTAGTGTTTGTTCCG 58.968 41.667 0.00 0.00 0.00 4.30
3719 11212 5.373981 TGTTAGTGTTTGTTCCGTTTGTT 57.626 34.783 0.00 0.00 0.00 2.83
3726 11219 4.335037 TGTTTGTTCCGTTTGTTACCTACC 59.665 41.667 0.00 0.00 0.00 3.18
3727 11220 3.834489 TGTTCCGTTTGTTACCTACCA 57.166 42.857 0.00 0.00 0.00 3.25
3733 11226 2.037511 CGTTTGTTACCTACCACCTCCA 59.962 50.000 0.00 0.00 0.00 3.86
3750 11243 6.715264 CCACCTCCATACCAAAATATAAGACC 59.285 42.308 0.00 0.00 0.00 3.85
3809 11308 2.902705 TTTGACGCAGAGGTACAGTT 57.097 45.000 0.00 0.00 0.00 3.16
3820 11319 6.238786 CGCAGAGGTACAGTTGTAGATATCTT 60.239 42.308 11.25 0.00 0.00 2.40
3882 11708 9.942850 ATTGAAAGAAAAGGTGAAAAAGAGAAA 57.057 25.926 0.00 0.00 0.00 2.52
3883 11709 9.771534 TTGAAAGAAAAGGTGAAAAAGAGAAAA 57.228 25.926 0.00 0.00 0.00 2.29
3933 11759 9.702494 AAATGACAAAAGAAGAATGAGAAATCC 57.298 29.630 0.00 0.00 0.00 3.01
3935 11761 8.469309 TGACAAAAGAAGAATGAGAAATCCTT 57.531 30.769 0.00 0.00 0.00 3.36
3936 11762 8.917088 TGACAAAAGAAGAATGAGAAATCCTTT 58.083 29.630 0.00 0.00 0.00 3.11
3937 11763 9.755804 GACAAAAGAAGAATGAGAAATCCTTTT 57.244 29.630 0.00 0.00 34.23 2.27
3938 11764 9.538508 ACAAAAGAAGAATGAGAAATCCTTTTG 57.461 29.630 17.39 17.39 46.87 2.44
3939 11765 8.985805 CAAAAGAAGAATGAGAAATCCTTTTGG 58.014 33.333 0.88 0.00 42.19 3.28
3979 11805 8.785329 AAAAACAAACCAGCAAATAAAAGAGA 57.215 26.923 0.00 0.00 0.00 3.10
3980 11806 8.424274 AAAACAAACCAGCAAATAAAAGAGAG 57.576 30.769 0.00 0.00 0.00 3.20
3981 11807 6.959639 ACAAACCAGCAAATAAAAGAGAGA 57.040 33.333 0.00 0.00 0.00 3.10
3982 11808 7.346751 ACAAACCAGCAAATAAAAGAGAGAA 57.653 32.000 0.00 0.00 0.00 2.87
3983 11809 7.781056 ACAAACCAGCAAATAAAAGAGAGAAA 58.219 30.769 0.00 0.00 0.00 2.52
3984 11810 8.257306 ACAAACCAGCAAATAAAAGAGAGAAAA 58.743 29.630 0.00 0.00 0.00 2.29
3985 11811 8.542953 CAAACCAGCAAATAAAAGAGAGAAAAC 58.457 33.333 0.00 0.00 0.00 2.43
3986 11812 6.749139 ACCAGCAAATAAAAGAGAGAAAACC 58.251 36.000 0.00 0.00 0.00 3.27
3987 11813 5.858581 CCAGCAAATAAAAGAGAGAAAACCG 59.141 40.000 0.00 0.00 0.00 4.44
3988 11814 6.293955 CCAGCAAATAAAAGAGAGAAAACCGA 60.294 38.462 0.00 0.00 0.00 4.69
3989 11815 7.138736 CAGCAAATAAAAGAGAGAAAACCGAA 58.861 34.615 0.00 0.00 0.00 4.30
3990 11816 7.647715 CAGCAAATAAAAGAGAGAAAACCGAAA 59.352 33.333 0.00 0.00 0.00 3.46
3991 11817 8.194769 AGCAAATAAAAGAGAGAAAACCGAAAA 58.805 29.630 0.00 0.00 0.00 2.29
3996 11822 5.425577 AAGAGAGAAAACCGAAAAGAAGC 57.574 39.130 0.00 0.00 0.00 3.86
3997 11823 4.451900 AGAGAGAAAACCGAAAAGAAGCA 58.548 39.130 0.00 0.00 0.00 3.91
3998 11824 5.066593 AGAGAGAAAACCGAAAAGAAGCAT 58.933 37.500 0.00 0.00 0.00 3.79
3999 11825 6.231211 AGAGAGAAAACCGAAAAGAAGCATA 58.769 36.000 0.00 0.00 0.00 3.14
4002 11828 6.710744 AGAGAAAACCGAAAAGAAGCATAAGA 59.289 34.615 0.00 0.00 0.00 2.10
4003 11829 7.228706 AGAGAAAACCGAAAAGAAGCATAAGAA 59.771 33.333 0.00 0.00 0.00 2.52
4005 11831 6.877611 AAACCGAAAAGAAGCATAAGAAGA 57.122 33.333 0.00 0.00 0.00 2.87
4007 11833 6.877611 ACCGAAAAGAAGCATAAGAAGAAA 57.122 33.333 0.00 0.00 0.00 2.52
4008 11834 6.669278 ACCGAAAAGAAGCATAAGAAGAAAC 58.331 36.000 0.00 0.00 0.00 2.78
4009 11835 6.262273 ACCGAAAAGAAGCATAAGAAGAAACA 59.738 34.615 0.00 0.00 0.00 2.83
4010 11836 7.138736 CCGAAAAGAAGCATAAGAAGAAACAA 58.861 34.615 0.00 0.00 0.00 2.83
4011 11837 7.647715 CCGAAAAGAAGCATAAGAAGAAACAAA 59.352 33.333 0.00 0.00 0.00 2.83
4012 11838 9.019764 CGAAAAGAAGCATAAGAAGAAACAAAA 57.980 29.630 0.00 0.00 0.00 2.44
4014 11840 8.648557 AAAGAAGCATAAGAAGAAACAAAACC 57.351 30.769 0.00 0.00 0.00 3.27
4015 11841 7.346751 AGAAGCATAAGAAGAAACAAAACCA 57.653 32.000 0.00 0.00 0.00 3.67
4017 11843 8.257306 AGAAGCATAAGAAGAAACAAAACCAAA 58.743 29.630 0.00 0.00 0.00 3.28
4020 11846 8.882736 AGCATAAGAAGAAACAAAACCAAAAAG 58.117 29.630 0.00 0.00 0.00 2.27
4021 11847 8.878769 GCATAAGAAGAAACAAAACCAAAAAGA 58.121 29.630 0.00 0.00 0.00 2.52
4025 11851 8.669946 AGAAGAAACAAAACCAAAAAGAAACA 57.330 26.923 0.00 0.00 0.00 2.83
4026 11852 9.114952 AGAAGAAACAAAACCAAAAAGAAACAA 57.885 25.926 0.00 0.00 0.00 2.83
4027 11853 9.723447 GAAGAAACAAAACCAAAAAGAAACAAA 57.277 25.926 0.00 0.00 0.00 2.83
4028 11854 9.729023 AAGAAACAAAACCAAAAAGAAACAAAG 57.271 25.926 0.00 0.00 0.00 2.77
4030 11856 9.381027 GAAACAAAACCAAAAAGAAACAAAGAG 57.619 29.630 0.00 0.00 0.00 2.85
4031 11857 8.669946 AACAAAACCAAAAAGAAACAAAGAGA 57.330 26.923 0.00 0.00 0.00 3.10
4032 11858 8.310406 ACAAAACCAAAAAGAAACAAAGAGAG 57.690 30.769 0.00 0.00 0.00 3.20
4033 11859 8.147704 ACAAAACCAAAAAGAAACAAAGAGAGA 58.852 29.630 0.00 0.00 0.00 3.10
4035 11861 8.763049 AAACCAAAAAGAAACAAAGAGAGAAG 57.237 30.769 0.00 0.00 0.00 2.85
4036 11862 7.468141 ACCAAAAAGAAACAAAGAGAGAAGT 57.532 32.000 0.00 0.00 0.00 3.01
4037 11863 7.315890 ACCAAAAAGAAACAAAGAGAGAAGTG 58.684 34.615 0.00 0.00 0.00 3.16
4038 11864 7.176690 ACCAAAAAGAAACAAAGAGAGAAGTGA 59.823 33.333 0.00 0.00 0.00 3.41
4039 11865 7.699812 CCAAAAAGAAACAAAGAGAGAAGTGAG 59.300 37.037 0.00 0.00 0.00 3.51
4040 11866 8.454106 CAAAAAGAAACAAAGAGAGAAGTGAGA 58.546 33.333 0.00 0.00 0.00 3.27
4041 11867 8.567285 AAAAGAAACAAAGAGAGAAGTGAGAA 57.433 30.769 0.00 0.00 0.00 2.87
4042 11868 8.567285 AAAGAAACAAAGAGAGAAGTGAGAAA 57.433 30.769 0.00 0.00 0.00 2.52
4043 11869 8.744568 AAGAAACAAAGAGAGAAGTGAGAAAT 57.255 30.769 0.00 0.00 0.00 2.17
4073 11899 9.717892 TTTTTGGATTTTGCGGTTTTAATAAAC 57.282 25.926 0.00 0.00 42.34 2.01
4074 11900 8.433421 TTTGGATTTTGCGGTTTTAATAAACA 57.567 26.923 0.00 0.00 44.37 2.83
4075 11901 7.409465 TGGATTTTGCGGTTTTAATAAACAC 57.591 32.000 0.00 0.00 44.37 3.32
4077 11903 7.042658 TGGATTTTGCGGTTTTAATAAACACAC 60.043 33.333 0.00 0.00 44.37 3.82
4078 11904 5.868177 TTTGCGGTTTTAATAAACACACG 57.132 34.783 0.00 0.00 44.37 4.49
4080 11906 5.165911 TGCGGTTTTAATAAACACACGAA 57.834 34.783 0.00 0.00 44.37 3.85
4081 11907 5.575957 TGCGGTTTTAATAAACACACGAAA 58.424 33.333 0.00 0.00 44.37 3.46
4082 11908 6.207213 TGCGGTTTTAATAAACACACGAAAT 58.793 32.000 0.00 0.00 44.37 2.17
4085 11911 8.689069 GCGGTTTTAATAAACACACGAAATAAA 58.311 29.630 0.00 0.00 44.37 1.40
4086 11912 9.977490 CGGTTTTAATAAACACACGAAATAAAC 57.023 29.630 0.00 0.00 44.37 2.01
4097 11923 8.073355 ACACACGAAATAAACAAACAAACAAA 57.927 26.923 0.00 0.00 0.00 2.83
4100 11926 7.742525 ACACGAAATAAACAAACAAACAAAAGC 59.257 29.630 0.00 0.00 0.00 3.51
4101 11927 7.742089 CACGAAATAAACAAACAAACAAAAGCA 59.258 29.630 0.00 0.00 0.00 3.91
4102 11928 8.283291 ACGAAATAAACAAACAAACAAAAGCAA 58.717 25.926 0.00 0.00 0.00 3.91
4107 11933 9.905171 ATAAACAAACAAACAAAAGCAAAACAT 57.095 22.222 0.00 0.00 0.00 2.71
4108 11934 7.620397 AACAAACAAACAAAAGCAAAACATG 57.380 28.000 0.00 0.00 0.00 3.21
4109 11935 6.148264 ACAAACAAACAAAAGCAAAACATGG 58.852 32.000 0.00 0.00 0.00 3.66
4110 11936 6.016777 ACAAACAAACAAAAGCAAAACATGGA 60.017 30.769 0.00 0.00 0.00 3.41
4112 11938 6.121613 ACAAACAAAAGCAAAACATGGATG 57.878 33.333 0.00 0.00 0.00 3.51
4113 11939 5.647225 ACAAACAAAAGCAAAACATGGATGT 59.353 32.000 0.00 0.00 44.20 3.06
4114 11940 6.820656 ACAAACAAAAGCAAAACATGGATGTA 59.179 30.769 0.00 0.00 40.80 2.29
4115 11941 6.843069 AACAAAAGCAAAACATGGATGTAC 57.157 33.333 0.00 0.00 40.80 2.90
4116 11942 5.911752 ACAAAAGCAAAACATGGATGTACA 58.088 33.333 0.00 0.00 40.80 2.90
4118 11944 6.820656 ACAAAAGCAAAACATGGATGTACAAA 59.179 30.769 0.00 0.00 40.80 2.83
4119 11945 7.011295 ACAAAAGCAAAACATGGATGTACAAAG 59.989 33.333 0.00 0.00 40.80 2.77
4121 11947 6.594788 AGCAAAACATGGATGTACAAAGAT 57.405 33.333 0.00 0.00 40.80 2.40
4122 11948 7.701539 AGCAAAACATGGATGTACAAAGATA 57.298 32.000 0.00 0.00 40.80 1.98
4125 11951 8.810427 GCAAAACATGGATGTACAAAGATAATG 58.190 33.333 0.00 1.58 40.80 1.90
4129 11955 9.466497 AACATGGATGTACAAAGATAATGAAGT 57.534 29.630 0.00 0.00 40.80 3.01
4130 11956 8.896744 ACATGGATGTACAAAGATAATGAAGTG 58.103 33.333 0.00 0.00 39.68 3.16
4131 11957 7.320443 TGGATGTACAAAGATAATGAAGTGC 57.680 36.000 0.00 0.00 0.00 4.40
4132 11958 6.883756 TGGATGTACAAAGATAATGAAGTGCA 59.116 34.615 0.00 0.00 0.00 4.57
4133 11959 7.148255 TGGATGTACAAAGATAATGAAGTGCAC 60.148 37.037 9.40 9.40 0.00 4.57
4134 11960 6.494893 TGTACAAAGATAATGAAGTGCACC 57.505 37.500 14.63 0.00 0.00 5.01
4135 11961 4.685169 ACAAAGATAATGAAGTGCACCG 57.315 40.909 14.63 0.00 0.00 4.94
4136 11962 4.323417 ACAAAGATAATGAAGTGCACCGA 58.677 39.130 14.63 0.00 0.00 4.69
4137 11963 4.154195 ACAAAGATAATGAAGTGCACCGAC 59.846 41.667 14.63 5.89 0.00 4.79
4138 11964 3.610040 AGATAATGAAGTGCACCGACA 57.390 42.857 14.63 11.77 0.00 4.35
4140 11966 3.935203 AGATAATGAAGTGCACCGACAAG 59.065 43.478 14.63 0.00 0.00 3.16
4142 11968 1.229428 ATGAAGTGCACCGACAAGTG 58.771 50.000 14.63 0.00 40.88 3.16
4143 11969 0.107897 TGAAGTGCACCGACAAGTGT 60.108 50.000 14.63 0.00 40.04 3.55
4144 11970 1.137282 TGAAGTGCACCGACAAGTGTA 59.863 47.619 14.63 0.00 40.04 2.90
4145 11971 2.206750 GAAGTGCACCGACAAGTGTAA 58.793 47.619 14.63 0.00 40.04 2.41
4146 11972 2.543777 AGTGCACCGACAAGTGTAAT 57.456 45.000 14.63 0.00 40.04 1.89
4147 11973 2.143122 AGTGCACCGACAAGTGTAATG 58.857 47.619 14.63 0.00 40.04 1.90
4149 11975 2.546368 GTGCACCGACAAGTGTAATGAA 59.454 45.455 5.22 0.00 40.04 2.57
4151 11977 3.188254 TGCACCGACAAGTGTAATGAATG 59.812 43.478 0.00 0.00 40.04 2.67
4152 11978 3.188460 GCACCGACAAGTGTAATGAATGT 59.812 43.478 0.00 0.00 40.04 2.71
4153 11979 4.711721 CACCGACAAGTGTAATGAATGTG 58.288 43.478 0.00 0.00 32.89 3.21
4154 11980 3.188460 ACCGACAAGTGTAATGAATGTGC 59.812 43.478 0.00 0.00 0.00 4.57
4156 11982 4.142622 CCGACAAGTGTAATGAATGTGCAT 60.143 41.667 0.00 0.00 0.00 3.96
4157 11983 4.789629 CGACAAGTGTAATGAATGTGCATG 59.210 41.667 0.00 0.00 0.00 4.06
4158 11984 5.390779 CGACAAGTGTAATGAATGTGCATGA 60.391 40.000 0.00 0.00 0.00 3.07
4159 11985 6.519679 ACAAGTGTAATGAATGTGCATGAT 57.480 33.333 0.00 0.00 0.00 2.45
4160 11986 7.465781 CGACAAGTGTAATGAATGTGCATGATA 60.466 37.037 0.00 0.00 0.00 2.15
4162 11988 7.970061 ACAAGTGTAATGAATGTGCATGATAAC 59.030 33.333 0.00 0.00 0.00 1.89
4163 11989 7.628769 AGTGTAATGAATGTGCATGATAACA 57.371 32.000 0.00 0.00 0.00 2.41
4164 11990 8.229253 AGTGTAATGAATGTGCATGATAACAT 57.771 30.769 0.00 0.00 38.66 2.71
4188 12014 9.158364 CATAAATGAAATTTCGGTGAGAATACG 57.842 33.333 13.34 0.00 44.81 3.06
4190 12016 5.524511 TGAAATTTCGGTGAGAATACGTG 57.475 39.130 13.34 0.00 38.86 4.49
4191 12017 4.142988 TGAAATTTCGGTGAGAATACGTGC 60.143 41.667 13.34 0.00 38.86 5.34
4192 12018 2.736144 TTTCGGTGAGAATACGTGCT 57.264 45.000 0.00 0.00 38.86 4.40
4193 12019 2.736144 TTCGGTGAGAATACGTGCTT 57.264 45.000 0.00 0.00 33.14 3.91
4194 12020 2.273370 TCGGTGAGAATACGTGCTTC 57.727 50.000 0.00 1.00 0.00 3.86
4195 12021 1.135199 TCGGTGAGAATACGTGCTTCC 60.135 52.381 0.00 0.00 0.00 3.46
4196 12022 1.135083 CGGTGAGAATACGTGCTTCCT 60.135 52.381 0.00 0.00 0.00 3.36
4197 12023 2.541556 GGTGAGAATACGTGCTTCCTC 58.458 52.381 0.00 0.00 0.00 3.71
4198 12024 2.094182 GGTGAGAATACGTGCTTCCTCA 60.094 50.000 0.00 1.09 0.00 3.86
4199 12025 3.585862 GTGAGAATACGTGCTTCCTCAA 58.414 45.455 0.00 0.00 0.00 3.02
4201 12027 4.631813 GTGAGAATACGTGCTTCCTCAAAT 59.368 41.667 0.00 0.00 0.00 2.32
4202 12028 5.122396 GTGAGAATACGTGCTTCCTCAAATT 59.878 40.000 0.00 0.00 0.00 1.82
4203 12029 5.705441 TGAGAATACGTGCTTCCTCAAATTT 59.295 36.000 0.00 0.00 0.00 1.82
4204 12030 6.876789 TGAGAATACGTGCTTCCTCAAATTTA 59.123 34.615 0.00 0.00 0.00 1.40
4205 12031 7.064609 TGAGAATACGTGCTTCCTCAAATTTAG 59.935 37.037 0.00 0.00 0.00 1.85
4206 12032 6.316390 AGAATACGTGCTTCCTCAAATTTAGG 59.684 38.462 0.00 0.00 35.26 2.69
4207 12033 2.488153 ACGTGCTTCCTCAAATTTAGGC 59.512 45.455 0.00 0.00 33.84 3.93
4208 12034 2.749621 CGTGCTTCCTCAAATTTAGGCT 59.250 45.455 0.00 0.00 33.84 4.58
4212 12038 5.406477 GTGCTTCCTCAAATTTAGGCTTTTG 59.594 40.000 0.00 0.00 33.84 2.44
4213 12039 4.389992 GCTTCCTCAAATTTAGGCTTTTGC 59.610 41.667 5.47 0.00 46.64 3.68
4224 12050 1.081175 GCTTTTGCGTCCTTGGCTC 60.081 57.895 0.00 0.00 34.86 4.70
4225 12051 1.795170 GCTTTTGCGTCCTTGGCTCA 61.795 55.000 0.00 0.00 34.86 4.26
4226 12052 0.040067 CTTTTGCGTCCTTGGCTCAC 60.040 55.000 0.00 0.00 0.00 3.51
4227 12053 0.465460 TTTTGCGTCCTTGGCTCACT 60.465 50.000 0.00 0.00 0.00 3.41
4228 12054 0.884704 TTTGCGTCCTTGGCTCACTC 60.885 55.000 0.00 0.00 0.00 3.51
4229 12055 2.435059 GCGTCCTTGGCTCACTCC 60.435 66.667 0.00 0.00 0.00 3.85
4231 12057 2.583441 CGTCCTTGGCTCACTCCCA 61.583 63.158 0.00 0.00 0.00 4.37
4232 12058 1.003233 GTCCTTGGCTCACTCCCAC 60.003 63.158 0.00 0.00 30.65 4.61
4233 12059 1.152030 TCCTTGGCTCACTCCCACT 60.152 57.895 0.00 0.00 30.65 4.00
4234 12060 1.002868 CCTTGGCTCACTCCCACTG 60.003 63.158 0.00 0.00 30.65 3.66
4235 12061 1.483595 CCTTGGCTCACTCCCACTGA 61.484 60.000 0.00 0.00 30.65 3.41
4236 12062 0.617413 CTTGGCTCACTCCCACTGAT 59.383 55.000 0.00 0.00 30.65 2.90
4237 12063 1.833630 CTTGGCTCACTCCCACTGATA 59.166 52.381 0.00 0.00 30.65 2.15
4238 12064 1.489481 TGGCTCACTCCCACTGATAG 58.511 55.000 0.00 0.00 0.00 2.08
4239 12065 1.273267 TGGCTCACTCCCACTGATAGT 60.273 52.381 0.00 0.00 0.00 2.12
4240 12066 1.137872 GGCTCACTCCCACTGATAGTG 59.862 57.143 2.05 2.05 45.53 2.74
4241 12067 1.472376 GCTCACTCCCACTGATAGTGC 60.472 57.143 3.49 0.00 44.63 4.40
4242 12068 0.817654 TCACTCCCACTGATAGTGCG 59.182 55.000 3.49 0.00 44.63 5.34
4243 12069 0.179100 CACTCCCACTGATAGTGCGG 60.179 60.000 3.49 6.76 44.63 5.69
4245 12071 1.043816 CTCCCACTGATAGTGCGGAT 58.956 55.000 15.00 0.00 44.63 4.18
4246 12072 2.239400 CTCCCACTGATAGTGCGGATA 58.761 52.381 15.00 1.31 44.63 2.59
4247 12073 2.628178 CTCCCACTGATAGTGCGGATAA 59.372 50.000 15.00 0.81 44.63 1.75
4248 12074 3.239449 TCCCACTGATAGTGCGGATAAT 58.761 45.455 12.26 0.00 44.63 1.28
4249 12075 3.006859 TCCCACTGATAGTGCGGATAATG 59.993 47.826 12.26 0.00 44.63 1.90
4250 12076 3.244215 CCCACTGATAGTGCGGATAATGT 60.244 47.826 3.49 0.00 44.63 2.71
4251 12077 3.742882 CCACTGATAGTGCGGATAATGTG 59.257 47.826 3.49 0.00 44.63 3.21
4254 12080 4.584743 ACTGATAGTGCGGATAATGTGAGA 59.415 41.667 0.00 0.00 0.00 3.27
4255 12081 5.126396 TGATAGTGCGGATAATGTGAGAG 57.874 43.478 0.00 0.00 0.00 3.20
4256 12082 2.231215 AGTGCGGATAATGTGAGAGC 57.769 50.000 0.00 0.00 0.00 4.09
4258 12084 0.829990 TGCGGATAATGTGAGAGCCA 59.170 50.000 0.00 0.00 0.00 4.75
4259 12085 1.417517 TGCGGATAATGTGAGAGCCAT 59.582 47.619 0.00 0.00 0.00 4.40
4260 12086 1.802960 GCGGATAATGTGAGAGCCATG 59.197 52.381 0.00 0.00 0.00 3.66
4261 12087 1.802960 CGGATAATGTGAGAGCCATGC 59.197 52.381 0.00 0.00 0.00 4.06
4262 12088 2.157738 GGATAATGTGAGAGCCATGCC 58.842 52.381 0.00 0.00 0.00 4.40
4263 12089 2.157738 GATAATGTGAGAGCCATGCCC 58.842 52.381 0.00 0.00 0.00 5.36
4265 12091 2.898920 AATGTGAGAGCCATGCCCCG 62.899 60.000 0.00 0.00 0.00 5.73
4266 12092 3.785859 GTGAGAGCCATGCCCCGA 61.786 66.667 0.00 0.00 0.00 5.14
4267 12093 3.008517 TGAGAGCCATGCCCCGAA 61.009 61.111 0.00 0.00 0.00 4.30
4268 12094 2.272146 GAGAGCCATGCCCCGAAA 59.728 61.111 0.00 0.00 0.00 3.46
4269 12095 1.821332 GAGAGCCATGCCCCGAAAG 60.821 63.158 0.00 0.00 0.00 2.62
4270 12096 2.044946 GAGCCATGCCCCGAAAGT 60.045 61.111 0.00 0.00 0.00 2.66
4271 12097 2.044946 AGCCATGCCCCGAAAGTC 60.045 61.111 0.00 0.00 0.00 3.01
4274 12100 1.750399 CCATGCCCCGAAAGTCAGG 60.750 63.158 0.00 0.00 0.00 3.86
4275 12101 2.044946 ATGCCCCGAAAGTCAGGC 60.045 61.111 0.00 0.00 45.96 4.85
4276 12102 2.606587 ATGCCCCGAAAGTCAGGCT 61.607 57.895 1.12 0.00 45.94 4.58
4277 12103 2.747855 GCCCCGAAAGTCAGGCTG 60.748 66.667 8.58 8.58 42.34 4.85
4278 12104 2.045926 CCCCGAAAGTCAGGCTGG 60.046 66.667 15.73 0.00 0.00 4.85
4279 12105 2.750350 CCCGAAAGTCAGGCTGGT 59.250 61.111 15.73 0.00 0.00 4.00
4283 12109 1.404315 CCGAAAGTCAGGCTGGTACTC 60.404 57.143 15.73 6.13 0.00 2.59
4284 12110 1.272490 CGAAAGTCAGGCTGGTACTCA 59.728 52.381 15.73 0.00 0.00 3.41
4285 12111 2.093973 CGAAAGTCAGGCTGGTACTCAT 60.094 50.000 15.73 4.65 0.00 2.90
4286 12112 3.130516 CGAAAGTCAGGCTGGTACTCATA 59.869 47.826 15.73 0.00 0.00 2.15
4290 12116 2.300437 GTCAGGCTGGTACTCATATCCC 59.700 54.545 15.73 0.00 0.00 3.85
4291 12117 2.180086 TCAGGCTGGTACTCATATCCCT 59.820 50.000 15.73 0.00 0.00 4.20
4292 12118 2.975489 CAGGCTGGTACTCATATCCCTT 59.025 50.000 6.61 0.00 0.00 3.95
4293 12119 3.007398 CAGGCTGGTACTCATATCCCTTC 59.993 52.174 6.61 0.00 0.00 3.46
4294 12120 2.972713 GGCTGGTACTCATATCCCTTCA 59.027 50.000 0.00 0.00 0.00 3.02
4295 12121 3.584848 GGCTGGTACTCATATCCCTTCAT 59.415 47.826 0.00 0.00 0.00 2.57
4296 12122 4.323104 GGCTGGTACTCATATCCCTTCATC 60.323 50.000 0.00 0.00 0.00 2.92
4297 12123 4.323104 GCTGGTACTCATATCCCTTCATCC 60.323 50.000 0.00 0.00 0.00 3.51
4298 12124 3.832490 TGGTACTCATATCCCTTCATCCG 59.168 47.826 0.00 0.00 0.00 4.18
4299 12125 4.087182 GGTACTCATATCCCTTCATCCGA 58.913 47.826 0.00 0.00 0.00 4.55
4300 12126 4.158764 GGTACTCATATCCCTTCATCCGAG 59.841 50.000 0.00 0.00 0.00 4.63
4301 12127 4.119556 ACTCATATCCCTTCATCCGAGA 57.880 45.455 0.00 0.00 0.00 4.04
4302 12128 3.829601 ACTCATATCCCTTCATCCGAGAC 59.170 47.826 0.00 0.00 0.00 3.36
4303 12129 4.085733 CTCATATCCCTTCATCCGAGACT 58.914 47.826 0.00 0.00 0.00 3.24
4304 12130 5.222151 ACTCATATCCCTTCATCCGAGACTA 60.222 44.000 0.00 0.00 0.00 2.59
4305 12131 5.641155 TCATATCCCTTCATCCGAGACTAA 58.359 41.667 0.00 0.00 0.00 2.24
4306 12132 6.256819 TCATATCCCTTCATCCGAGACTAAT 58.743 40.000 0.00 0.00 0.00 1.73
4307 12133 4.881019 ATCCCTTCATCCGAGACTAATG 57.119 45.455 0.00 0.00 0.00 1.90
4308 12134 2.965831 TCCCTTCATCCGAGACTAATGG 59.034 50.000 0.00 0.00 0.00 3.16
4309 12135 2.965831 CCCTTCATCCGAGACTAATGGA 59.034 50.000 0.00 0.00 35.96 3.41
4311 12137 4.141711 CCCTTCATCCGAGACTAATGGAAA 60.142 45.833 0.00 0.00 34.97 3.13
4312 12138 4.811557 CCTTCATCCGAGACTAATGGAAAC 59.188 45.833 0.00 0.00 34.97 2.78
4313 12139 5.395768 CCTTCATCCGAGACTAATGGAAACT 60.396 44.000 0.00 0.00 34.97 2.66
4314 12140 5.677319 TCATCCGAGACTAATGGAAACTT 57.323 39.130 0.00 0.00 34.97 2.66
4316 12142 4.106029 TCCGAGACTAATGGAAACTTCG 57.894 45.455 0.00 0.00 0.00 3.79
4317 12143 3.508793 TCCGAGACTAATGGAAACTTCGT 59.491 43.478 0.00 0.00 0.00 3.85
4318 12144 3.858238 CCGAGACTAATGGAAACTTCGTC 59.142 47.826 0.00 0.00 0.00 4.20
4319 12145 4.380655 CCGAGACTAATGGAAACTTCGTCT 60.381 45.833 0.00 0.00 33.68 4.18
4321 12147 4.822026 AGACTAATGGAAACTTCGTCTGG 58.178 43.478 0.00 0.00 31.47 3.86
4322 12148 3.335579 ACTAATGGAAACTTCGTCTGGC 58.664 45.455 0.00 0.00 0.00 4.85
4323 12149 2.568623 AATGGAAACTTCGTCTGGCT 57.431 45.000 0.00 0.00 0.00 4.75
4324 12150 3.695830 AATGGAAACTTCGTCTGGCTA 57.304 42.857 0.00 0.00 0.00 3.93
4325 12151 3.914426 ATGGAAACTTCGTCTGGCTAT 57.086 42.857 0.00 0.00 0.00 2.97
4326 12152 3.247006 TGGAAACTTCGTCTGGCTATC 57.753 47.619 0.00 0.00 0.00 2.08
4327 12153 2.832129 TGGAAACTTCGTCTGGCTATCT 59.168 45.455 0.00 0.00 0.00 1.98
4328 12154 3.190874 GGAAACTTCGTCTGGCTATCTG 58.809 50.000 0.00 0.00 0.00 2.90
4329 12155 3.368531 GGAAACTTCGTCTGGCTATCTGT 60.369 47.826 0.00 0.00 0.00 3.41
4330 12156 4.142227 GGAAACTTCGTCTGGCTATCTGTA 60.142 45.833 0.00 0.00 0.00 2.74
4331 12157 4.373348 AACTTCGTCTGGCTATCTGTAC 57.627 45.455 0.00 0.00 0.00 2.90
4332 12158 2.355132 ACTTCGTCTGGCTATCTGTACG 59.645 50.000 0.00 0.00 0.00 3.67
4333 12159 2.034104 TCGTCTGGCTATCTGTACGT 57.966 50.000 0.00 0.00 0.00 3.57
4334 12160 1.938577 TCGTCTGGCTATCTGTACGTC 59.061 52.381 0.00 0.00 0.00 4.34
4335 12161 1.002684 CGTCTGGCTATCTGTACGTCC 60.003 57.143 0.00 0.00 0.00 4.79
4336 12162 2.022195 GTCTGGCTATCTGTACGTCCA 58.978 52.381 0.00 0.00 0.00 4.02
4337 12163 2.426024 GTCTGGCTATCTGTACGTCCAA 59.574 50.000 0.00 0.00 0.00 3.53
4338 12164 3.068307 GTCTGGCTATCTGTACGTCCAAT 59.932 47.826 0.00 0.00 0.00 3.16
4339 12165 3.068165 TCTGGCTATCTGTACGTCCAATG 59.932 47.826 0.00 0.00 0.00 2.82
4340 12166 2.102420 TGGCTATCTGTACGTCCAATGG 59.898 50.000 0.00 0.00 0.00 3.16
4341 12167 2.364324 GGCTATCTGTACGTCCAATGGA 59.636 50.000 0.00 0.00 0.00 3.41
4342 12168 3.181469 GGCTATCTGTACGTCCAATGGAA 60.181 47.826 2.31 0.00 31.38 3.53
4343 12169 3.802685 GCTATCTGTACGTCCAATGGAAC 59.197 47.826 2.31 0.00 31.38 3.62
4357 12183 0.039618 TGGAACAATCCTCCCAAGGC 59.960 55.000 0.00 0.00 46.70 4.35
4358 12184 1.032114 GGAACAATCCTCCCAAGGCG 61.032 60.000 0.00 0.00 43.02 5.52
4359 12185 0.035439 GAACAATCCTCCCAAGGCGA 60.035 55.000 0.00 0.00 43.02 5.54
4360 12186 0.035056 AACAATCCTCCCAAGGCGAG 60.035 55.000 0.00 0.00 43.02 5.03
4361 12187 1.821332 CAATCCTCCCAAGGCGAGC 60.821 63.158 0.00 0.00 43.02 5.03
4362 12188 2.300967 AATCCTCCCAAGGCGAGCA 61.301 57.895 0.00 0.00 43.02 4.26
4363 12189 2.262774 AATCCTCCCAAGGCGAGCAG 62.263 60.000 0.00 0.00 43.02 4.24
4375 12201 2.267324 GAGCAGCCTCGCCTTTCT 59.733 61.111 0.00 0.00 0.00 2.52
4376 12202 1.517832 GAGCAGCCTCGCCTTTCTA 59.482 57.895 0.00 0.00 0.00 2.10
4377 12203 0.808060 GAGCAGCCTCGCCTTTCTAC 60.808 60.000 0.00 0.00 0.00 2.59
4378 12204 1.815840 GCAGCCTCGCCTTTCTACC 60.816 63.158 0.00 0.00 0.00 3.18
4379 12205 1.596934 CAGCCTCGCCTTTCTACCA 59.403 57.895 0.00 0.00 0.00 3.25
4380 12206 0.460987 CAGCCTCGCCTTTCTACCAG 60.461 60.000 0.00 0.00 0.00 4.00
4381 12207 0.614979 AGCCTCGCCTTTCTACCAGA 60.615 55.000 0.00 0.00 0.00 3.86
4382 12208 0.460459 GCCTCGCCTTTCTACCAGAC 60.460 60.000 0.00 0.00 0.00 3.51
4383 12209 0.895530 CCTCGCCTTTCTACCAGACA 59.104 55.000 0.00 0.00 0.00 3.41
4384 12210 1.275291 CCTCGCCTTTCTACCAGACAA 59.725 52.381 0.00 0.00 0.00 3.18
4385 12211 2.611518 CTCGCCTTTCTACCAGACAAG 58.388 52.381 0.00 0.00 0.00 3.16
4386 12212 1.968493 TCGCCTTTCTACCAGACAAGT 59.032 47.619 0.00 0.00 0.00 3.16
4387 12213 3.159472 TCGCCTTTCTACCAGACAAGTA 58.841 45.455 0.00 0.00 0.00 2.24
4388 12214 3.767673 TCGCCTTTCTACCAGACAAGTAT 59.232 43.478 0.00 0.00 0.00 2.12
4389 12215 4.222145 TCGCCTTTCTACCAGACAAGTATT 59.778 41.667 0.00 0.00 0.00 1.89
4390 12216 5.419788 TCGCCTTTCTACCAGACAAGTATTA 59.580 40.000 0.00 0.00 0.00 0.98
4391 12217 5.749109 CGCCTTTCTACCAGACAAGTATTAG 59.251 44.000 0.00 0.00 0.00 1.73
4392 12218 5.524281 GCCTTTCTACCAGACAAGTATTAGC 59.476 44.000 0.00 0.00 0.00 3.09
4393 12219 6.630638 GCCTTTCTACCAGACAAGTATTAGCT 60.631 42.308 0.00 0.00 0.00 3.32
4394 12220 7.331791 CCTTTCTACCAGACAAGTATTAGCTT 58.668 38.462 0.00 0.00 0.00 3.74
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
149 150 1.470098 CGGAATTGCAGGAAGGTCAAG 59.530 52.381 0.00 0.00 0.00 3.02
205 225 3.711190 TCAATGGCAGTATAAGCAGGAGA 59.289 43.478 0.00 0.00 0.00 3.71
230 250 8.631797 TGTATGGTTGATATGAACATGAATTGG 58.368 33.333 7.37 0.00 0.00 3.16
398 425 0.608130 TCACGACATCCCAGTTGAGG 59.392 55.000 0.00 0.00 0.00 3.86
439 466 8.718734 AGTTATCTCGGTTGAATAAAGTTTGTC 58.281 33.333 0.00 0.00 0.00 3.18
442 469 8.842358 TCAGTTATCTCGGTTGAATAAAGTTT 57.158 30.769 0.00 0.00 0.00 2.66
465 492 4.441792 CATCCCTCACAAACGATGTATCA 58.558 43.478 0.00 0.00 41.46 2.15
484 511 7.308830 GGAGCCTATGAATGAAATTGTACCATC 60.309 40.741 0.00 0.00 36.07 3.51
593 621 9.231297 CTTGTGATTTTCCTATTTCTAGGTTCA 57.769 33.333 0.00 0.00 44.40 3.18
938 973 2.915659 ACCTCCTCGCAACGACCA 60.916 61.111 0.00 0.00 0.00 4.02
961 996 1.403814 CTGCTACGAAGGAGGGATGA 58.596 55.000 0.00 0.00 37.52 2.92
995 1045 1.769098 CGCTGATGCCACCATCTTCG 61.769 60.000 5.41 5.02 46.43 3.79
1144 1204 2.839486 ACTGAAATGAGAGGACGCAA 57.161 45.000 0.00 0.00 0.00 4.85
1222 1306 2.174639 TCTGCTCCCAGAAGAAAACCAA 59.825 45.455 0.00 0.00 44.79 3.67
2116 2301 3.115554 GTGCAAACTTTTCACGAAGCAT 58.884 40.909 0.00 0.00 32.98 3.79
2445 5883 6.655078 ACAGAATAACAGTGGCTTGAAAAT 57.345 33.333 0.00 0.00 0.00 1.82
2615 6163 6.349777 GCTTTTAACATACAACCAGCATACCA 60.350 38.462 0.00 0.00 0.00 3.25
2926 7028 6.012245 TGGATATTGATGATACTGCCCTCATT 60.012 38.462 0.00 0.00 32.36 2.57
3127 7271 4.343526 ACAATGGGAGTTGTGCAATGTTTA 59.656 37.500 0.00 0.00 40.60 2.01
3179 7487 5.989777 GCTTTAGTCTCACTAACAAGTGGAA 59.010 40.000 5.74 0.00 40.12 3.53
3252 7561 3.068024 GTCAGTCAGCAACAAATCCCAAA 59.932 43.478 0.00 0.00 0.00 3.28
3263 7572 4.216042 CACATGTAAATGGTCAGTCAGCAA 59.784 41.667 0.00 0.00 35.67 3.91
3291 7600 0.675837 CTGTGTCATCAGGGCTGGTG 60.676 60.000 0.00 0.00 42.85 4.17
3300 7609 0.107268 ACTGCTGCACTGTGTCATCA 59.893 50.000 9.86 8.68 0.00 3.07
3392 7704 5.399991 TCTACTGAGGAAGTTTAGGGTTCA 58.600 41.667 0.00 0.00 40.56 3.18
3397 7710 5.303333 GGGAGATCTACTGAGGAAGTTTAGG 59.697 48.000 4.57 0.00 40.56 2.69
3400 7713 4.714308 CAGGGAGATCTACTGAGGAAGTTT 59.286 45.833 17.76 0.00 40.56 2.66
3401 7714 4.264623 ACAGGGAGATCTACTGAGGAAGTT 60.265 45.833 25.55 6.16 40.56 2.66
3402 7715 3.270960 ACAGGGAGATCTACTGAGGAAGT 59.729 47.826 25.55 6.72 43.40 3.01
3403 7716 3.909732 ACAGGGAGATCTACTGAGGAAG 58.090 50.000 25.55 6.17 36.17 3.46
3404 7717 4.264397 TGAACAGGGAGATCTACTGAGGAA 60.264 45.833 25.55 10.88 36.17 3.36
3405 7718 3.269643 TGAACAGGGAGATCTACTGAGGA 59.730 47.826 25.55 11.00 36.17 3.71
3406 7719 3.383185 GTGAACAGGGAGATCTACTGAGG 59.617 52.174 25.55 8.48 36.17 3.86
3407 7720 4.097741 CAGTGAACAGGGAGATCTACTGAG 59.902 50.000 25.55 10.87 33.88 3.35
3408 7721 4.019858 CAGTGAACAGGGAGATCTACTGA 58.980 47.826 25.55 7.87 33.88 3.41
3409 7722 3.766591 ACAGTGAACAGGGAGATCTACTG 59.233 47.826 19.92 19.92 35.90 2.74
3410 7723 4.054359 ACAGTGAACAGGGAGATCTACT 57.946 45.455 4.57 0.00 0.00 2.57
3411 7724 4.220821 TGAACAGTGAACAGGGAGATCTAC 59.779 45.833 0.00 0.00 0.00 2.59
3412 7725 4.416516 TGAACAGTGAACAGGGAGATCTA 58.583 43.478 0.00 0.00 0.00 1.98
3413 7726 3.242867 TGAACAGTGAACAGGGAGATCT 58.757 45.455 0.00 0.00 0.00 2.75
3414 7727 3.594134 CTGAACAGTGAACAGGGAGATC 58.406 50.000 0.00 0.00 0.00 2.75
3415 7728 2.304180 CCTGAACAGTGAACAGGGAGAT 59.696 50.000 22.82 0.00 44.96 2.75
3416 7729 1.694150 CCTGAACAGTGAACAGGGAGA 59.306 52.381 22.82 0.00 44.96 3.71
3417 7730 2.175878 CCTGAACAGTGAACAGGGAG 57.824 55.000 22.82 6.92 44.96 4.30
3421 7734 6.846350 GGAATTATTCCTGAACAGTGAACAG 58.154 40.000 16.16 5.77 46.57 3.16
3422 7735 6.817765 GGAATTATTCCTGAACAGTGAACA 57.182 37.500 16.16 0.00 46.57 3.18
3449 7766 4.722361 ACGAGTTCAAAGGGAGATCTAC 57.278 45.455 0.00 0.00 0.00 2.59
3471 7789 2.187100 GGGGAGGGATGCAAAAATTGA 58.813 47.619 0.00 0.00 0.00 2.57
3474 7792 0.041090 ACGGGGAGGGATGCAAAAAT 59.959 50.000 0.00 0.00 0.00 1.82
3515 7850 6.905076 GCTGTTTGTGAATGTATACCAATACG 59.095 38.462 0.00 0.00 40.84 3.06
3672 8606 0.311165 CCGTGGATCTGCTAGGTACG 59.689 60.000 0.00 0.00 0.00 3.67
3686 11179 4.142556 ACAAACACTAACAAAACTCCGTGG 60.143 41.667 0.00 0.00 0.00 4.94
3689 11182 5.032220 GGAACAAACACTAACAAAACTCCG 58.968 41.667 0.00 0.00 0.00 4.63
3701 11194 4.011698 AGGTAACAAACGGAACAAACACT 58.988 39.130 0.00 0.00 41.41 3.55
3708 11201 2.807967 GGTGGTAGGTAACAAACGGAAC 59.192 50.000 0.00 0.00 41.41 3.62
3713 11206 3.775261 TGGAGGTGGTAGGTAACAAAC 57.225 47.619 0.00 0.00 41.41 2.93
3719 11212 3.780516 TTGGTATGGAGGTGGTAGGTA 57.219 47.619 0.00 0.00 0.00 3.08
3726 11219 7.518188 AGGTCTTATATTTTGGTATGGAGGTG 58.482 38.462 0.00 0.00 0.00 4.00
3727 11220 7.707467 AGGTCTTATATTTTGGTATGGAGGT 57.293 36.000 0.00 0.00 0.00 3.85
3795 11294 3.784701 ATCTACAACTGTACCTCTGCG 57.215 47.619 0.00 0.00 0.00 5.18
3796 11295 6.642707 AGATATCTACAACTGTACCTCTGC 57.357 41.667 2.53 0.00 0.00 4.26
3854 11353 9.942850 TCTCTTTTTCACCTTTTCTTTCAATTT 57.057 25.926 0.00 0.00 0.00 1.82
3855 11354 9.942850 TTCTCTTTTTCACCTTTTCTTTCAATT 57.057 25.926 0.00 0.00 0.00 2.32
3856 11355 9.942850 TTTCTCTTTTTCACCTTTTCTTTCAAT 57.057 25.926 0.00 0.00 0.00 2.57
3857 11356 9.771534 TTTTCTCTTTTTCACCTTTTCTTTCAA 57.228 25.926 0.00 0.00 0.00 2.69
3858 11357 9.942850 ATTTTCTCTTTTTCACCTTTTCTTTCA 57.057 25.926 0.00 0.00 0.00 2.69
3908 11734 9.086758 AGGATTTCTCATTCTTCTTTTGTCATT 57.913 29.630 0.00 0.00 0.00 2.57
3909 11735 8.647256 AGGATTTCTCATTCTTCTTTTGTCAT 57.353 30.769 0.00 0.00 0.00 3.06
3910 11736 8.469309 AAGGATTTCTCATTCTTCTTTTGTCA 57.531 30.769 0.00 0.00 0.00 3.58
3911 11737 9.755804 AAAAGGATTTCTCATTCTTCTTTTGTC 57.244 29.630 0.00 0.00 37.28 3.18
3913 11739 8.985805 CCAAAAGGATTTCTCATTCTTCTTTTG 58.014 33.333 14.50 14.50 44.13 2.44
3914 11740 8.927411 TCCAAAAGGATTTCTCATTCTTCTTTT 58.073 29.630 0.00 0.00 37.28 2.27
3915 11741 8.482852 TCCAAAAGGATTTCTCATTCTTCTTT 57.517 30.769 0.00 0.00 37.28 2.52
3916 11742 8.661752 ATCCAAAAGGATTTCTCATTCTTCTT 57.338 30.769 0.00 0.00 37.28 2.52
3917 11743 8.661752 AATCCAAAAGGATTTCTCATTCTTCT 57.338 30.769 3.98 0.00 37.28 2.85
3918 11744 9.716531 AAAATCCAAAAGGATTTCTCATTCTTC 57.283 29.630 19.46 0.00 44.64 2.87
3921 11747 9.716531 AAGAAAATCCAAAAGGATTTCTCATTC 57.283 29.630 19.46 13.84 44.64 2.67
3924 11750 9.904198 AAAAAGAAAATCCAAAAGGATTTCTCA 57.096 25.926 19.46 0.00 44.64 3.27
3953 11779 9.877178 TCTCTTTTATTTGCTGGTTTGTTTTTA 57.123 25.926 0.00 0.00 0.00 1.52
3955 11781 8.257306 TCTCTCTTTTATTTGCTGGTTTGTTTT 58.743 29.630 0.00 0.00 0.00 2.43
3956 11782 7.781056 TCTCTCTTTTATTTGCTGGTTTGTTT 58.219 30.769 0.00 0.00 0.00 2.83
3959 11785 8.542953 GTTTTCTCTCTTTTATTTGCTGGTTTG 58.457 33.333 0.00 0.00 0.00 2.93
3960 11786 7.710907 GGTTTTCTCTCTTTTATTTGCTGGTTT 59.289 33.333 0.00 0.00 0.00 3.27
3961 11787 7.210174 GGTTTTCTCTCTTTTATTTGCTGGTT 58.790 34.615 0.00 0.00 0.00 3.67
3963 11789 5.858581 CGGTTTTCTCTCTTTTATTTGCTGG 59.141 40.000 0.00 0.00 0.00 4.85
3966 11792 7.924103 TTTCGGTTTTCTCTCTTTTATTTGC 57.076 32.000 0.00 0.00 0.00 3.68
3967 11793 9.730420 TCTTTTCGGTTTTCTCTCTTTTATTTG 57.270 29.630 0.00 0.00 0.00 2.32
3970 11796 8.076781 GCTTCTTTTCGGTTTTCTCTCTTTTAT 58.923 33.333 0.00 0.00 0.00 1.40
3971 11797 7.066525 TGCTTCTTTTCGGTTTTCTCTCTTTTA 59.933 33.333 0.00 0.00 0.00 1.52
3972 11798 6.127730 TGCTTCTTTTCGGTTTTCTCTCTTTT 60.128 34.615 0.00 0.00 0.00 2.27
3973 11799 5.357032 TGCTTCTTTTCGGTTTTCTCTCTTT 59.643 36.000 0.00 0.00 0.00 2.52
3974 11800 4.881850 TGCTTCTTTTCGGTTTTCTCTCTT 59.118 37.500 0.00 0.00 0.00 2.85
3976 11802 4.813296 TGCTTCTTTTCGGTTTTCTCTC 57.187 40.909 0.00 0.00 0.00 3.20
3977 11803 6.710744 TCTTATGCTTCTTTTCGGTTTTCTCT 59.289 34.615 0.00 0.00 0.00 3.10
3978 11804 6.899114 TCTTATGCTTCTTTTCGGTTTTCTC 58.101 36.000 0.00 0.00 0.00 2.87
3979 11805 6.877611 TCTTATGCTTCTTTTCGGTTTTCT 57.122 33.333 0.00 0.00 0.00 2.52
3980 11806 7.360361 TCTTCTTATGCTTCTTTTCGGTTTTC 58.640 34.615 0.00 0.00 0.00 2.29
3981 11807 7.272037 TCTTCTTATGCTTCTTTTCGGTTTT 57.728 32.000 0.00 0.00 0.00 2.43
3982 11808 6.877611 TCTTCTTATGCTTCTTTTCGGTTT 57.122 33.333 0.00 0.00 0.00 3.27
3983 11809 6.877611 TTCTTCTTATGCTTCTTTTCGGTT 57.122 33.333 0.00 0.00 0.00 4.44
3984 11810 6.262273 TGTTTCTTCTTATGCTTCTTTTCGGT 59.738 34.615 0.00 0.00 0.00 4.69
3985 11811 6.668323 TGTTTCTTCTTATGCTTCTTTTCGG 58.332 36.000 0.00 0.00 0.00 4.30
3986 11812 8.560576 TTTGTTTCTTCTTATGCTTCTTTTCG 57.439 30.769 0.00 0.00 0.00 3.46
3988 11814 9.098355 GGTTTTGTTTCTTCTTATGCTTCTTTT 57.902 29.630 0.00 0.00 0.00 2.27
3989 11815 8.257306 TGGTTTTGTTTCTTCTTATGCTTCTTT 58.743 29.630 0.00 0.00 0.00 2.52
3990 11816 7.781056 TGGTTTTGTTTCTTCTTATGCTTCTT 58.219 30.769 0.00 0.00 0.00 2.52
3991 11817 7.346751 TGGTTTTGTTTCTTCTTATGCTTCT 57.653 32.000 0.00 0.00 0.00 2.85
3994 11820 8.785329 TTTTTGGTTTTGTTTCTTCTTATGCT 57.215 26.923 0.00 0.00 0.00 3.79
3999 11825 9.114952 TGTTTCTTTTTGGTTTTGTTTCTTCTT 57.885 25.926 0.00 0.00 0.00 2.52
4002 11828 9.729023 CTTTGTTTCTTTTTGGTTTTGTTTCTT 57.271 25.926 0.00 0.00 0.00 2.52
4003 11829 9.114952 TCTTTGTTTCTTTTTGGTTTTGTTTCT 57.885 25.926 0.00 0.00 0.00 2.52
4005 11831 9.114952 TCTCTTTGTTTCTTTTTGGTTTTGTTT 57.885 25.926 0.00 0.00 0.00 2.83
4007 11833 8.147704 TCTCTCTTTGTTTCTTTTTGGTTTTGT 58.852 29.630 0.00 0.00 0.00 2.83
4008 11834 8.532977 TCTCTCTTTGTTTCTTTTTGGTTTTG 57.467 30.769 0.00 0.00 0.00 2.44
4009 11835 9.208022 CTTCTCTCTTTGTTTCTTTTTGGTTTT 57.792 29.630 0.00 0.00 0.00 2.43
4010 11836 8.367911 ACTTCTCTCTTTGTTTCTTTTTGGTTT 58.632 29.630 0.00 0.00 0.00 3.27
4011 11837 7.814587 CACTTCTCTCTTTGTTTCTTTTTGGTT 59.185 33.333 0.00 0.00 0.00 3.67
4012 11838 7.176690 TCACTTCTCTCTTTGTTTCTTTTTGGT 59.823 33.333 0.00 0.00 0.00 3.67
4013 11839 7.538575 TCACTTCTCTCTTTGTTTCTTTTTGG 58.461 34.615 0.00 0.00 0.00 3.28
4014 11840 8.454106 TCTCACTTCTCTCTTTGTTTCTTTTTG 58.546 33.333 0.00 0.00 0.00 2.44
4015 11841 8.567285 TCTCACTTCTCTCTTTGTTTCTTTTT 57.433 30.769 0.00 0.00 0.00 1.94
4017 11843 8.567285 TTTCTCACTTCTCTCTTTGTTTCTTT 57.433 30.769 0.00 0.00 0.00 2.52
4047 11873 9.717892 GTTTATTAAAACCGCAAAATCCAAAAA 57.282 25.926 0.00 0.00 39.29 1.94
4049 11875 8.336080 GTGTTTATTAAAACCGCAAAATCCAAA 58.664 29.630 0.00 0.00 43.66 3.28
4050 11876 7.494625 TGTGTTTATTAAAACCGCAAAATCCAA 59.505 29.630 0.00 0.00 43.66 3.53
4051 11877 6.984474 TGTGTTTATTAAAACCGCAAAATCCA 59.016 30.769 0.00 0.00 43.66 3.41
4053 11879 6.999055 CGTGTGTTTATTAAAACCGCAAAATC 59.001 34.615 0.00 0.00 43.66 2.17
4054 11880 6.696148 TCGTGTGTTTATTAAAACCGCAAAAT 59.304 30.769 0.00 0.00 43.66 1.82
4056 11882 5.575957 TCGTGTGTTTATTAAAACCGCAAA 58.424 33.333 0.00 0.00 43.66 3.68
4057 11883 5.165911 TCGTGTGTTTATTAAAACCGCAA 57.834 34.783 0.00 0.00 43.66 4.85
4058 11884 4.808077 TCGTGTGTTTATTAAAACCGCA 57.192 36.364 0.00 0.00 43.66 5.69
4059 11885 6.678540 ATTTCGTGTGTTTATTAAAACCGC 57.321 33.333 0.00 0.00 43.66 5.68
4069 11895 9.188588 TGTTTGTTTGTTTATTTCGTGTGTTTA 57.811 25.926 0.00 0.00 0.00 2.01
4070 11896 8.073355 TGTTTGTTTGTTTATTTCGTGTGTTT 57.927 26.923 0.00 0.00 0.00 2.83
4073 11899 8.919695 TTTTGTTTGTTTGTTTATTTCGTGTG 57.080 26.923 0.00 0.00 0.00 3.82
4074 11900 7.742525 GCTTTTGTTTGTTTGTTTATTTCGTGT 59.257 29.630 0.00 0.00 0.00 4.49
4075 11901 7.742089 TGCTTTTGTTTGTTTGTTTATTTCGTG 59.258 29.630 0.00 0.00 0.00 4.35
4077 11903 8.647035 TTGCTTTTGTTTGTTTGTTTATTTCG 57.353 26.923 0.00 0.00 0.00 3.46
4080 11906 9.736023 TGTTTTGCTTTTGTTTGTTTGTTTATT 57.264 22.222 0.00 0.00 0.00 1.40
4081 11907 9.905171 ATGTTTTGCTTTTGTTTGTTTGTTTAT 57.095 22.222 0.00 0.00 0.00 1.40
4082 11908 9.173939 CATGTTTTGCTTTTGTTTGTTTGTTTA 57.826 25.926 0.00 0.00 0.00 2.01
4085 11911 6.016777 TCCATGTTTTGCTTTTGTTTGTTTGT 60.017 30.769 0.00 0.00 0.00 2.83
4086 11912 6.376978 TCCATGTTTTGCTTTTGTTTGTTTG 58.623 32.000 0.00 0.00 0.00 2.93
4087 11913 6.566197 TCCATGTTTTGCTTTTGTTTGTTT 57.434 29.167 0.00 0.00 0.00 2.83
4089 11915 5.647225 ACATCCATGTTTTGCTTTTGTTTGT 59.353 32.000 0.00 0.00 37.90 2.83
4090 11916 6.121613 ACATCCATGTTTTGCTTTTGTTTG 57.878 33.333 0.00 0.00 37.90 2.93
4097 11923 6.403866 TCTTTGTACATCCATGTTTTGCTT 57.596 33.333 0.00 0.00 41.97 3.91
4104 11930 8.896744 CACTTCATTATCTTTGTACATCCATGT 58.103 33.333 0.00 0.00 44.48 3.21
4107 11933 6.883756 TGCACTTCATTATCTTTGTACATCCA 59.116 34.615 0.00 0.00 0.00 3.41
4108 11934 7.189512 GTGCACTTCATTATCTTTGTACATCC 58.810 38.462 10.32 0.00 0.00 3.51
4109 11935 7.189512 GGTGCACTTCATTATCTTTGTACATC 58.810 38.462 17.98 0.00 0.00 3.06
4110 11936 6.183360 CGGTGCACTTCATTATCTTTGTACAT 60.183 38.462 17.98 0.00 0.00 2.29
4112 11938 5.350365 TCGGTGCACTTCATTATCTTTGTAC 59.650 40.000 17.98 0.00 0.00 2.90
4113 11939 5.350365 GTCGGTGCACTTCATTATCTTTGTA 59.650 40.000 17.98 0.00 0.00 2.41
4114 11940 4.154195 GTCGGTGCACTTCATTATCTTTGT 59.846 41.667 17.98 0.00 0.00 2.83
4115 11941 4.154015 TGTCGGTGCACTTCATTATCTTTG 59.846 41.667 17.98 0.00 0.00 2.77
4116 11942 4.323417 TGTCGGTGCACTTCATTATCTTT 58.677 39.130 17.98 0.00 0.00 2.52
4118 11944 3.610040 TGTCGGTGCACTTCATTATCT 57.390 42.857 17.98 0.00 0.00 1.98
4119 11945 3.684788 ACTTGTCGGTGCACTTCATTATC 59.315 43.478 17.98 0.00 0.00 1.75
4121 11947 2.805671 CACTTGTCGGTGCACTTCATTA 59.194 45.455 17.98 0.00 0.00 1.90
4122 11948 1.603802 CACTTGTCGGTGCACTTCATT 59.396 47.619 17.98 1.86 0.00 2.57
4125 11951 1.860676 TACACTTGTCGGTGCACTTC 58.139 50.000 17.98 8.05 40.52 3.01
4126 11952 2.319136 TTACACTTGTCGGTGCACTT 57.681 45.000 17.98 0.00 40.52 3.16
4127 11953 2.143122 CATTACACTTGTCGGTGCACT 58.857 47.619 17.98 0.00 40.52 4.40
4128 11954 2.139917 TCATTACACTTGTCGGTGCAC 58.860 47.619 8.80 8.80 40.52 4.57
4129 11955 2.535012 TCATTACACTTGTCGGTGCA 57.465 45.000 0.00 0.00 40.52 4.57
4130 11956 3.188460 ACATTCATTACACTTGTCGGTGC 59.812 43.478 0.00 0.00 40.52 5.01
4131 11957 4.711721 CACATTCATTACACTTGTCGGTG 58.288 43.478 0.00 0.00 42.34 4.94
4132 11958 3.188460 GCACATTCATTACACTTGTCGGT 59.812 43.478 0.00 0.00 0.00 4.69
4133 11959 3.188254 TGCACATTCATTACACTTGTCGG 59.812 43.478 0.00 0.00 0.00 4.79
4134 11960 4.403015 TGCACATTCATTACACTTGTCG 57.597 40.909 0.00 0.00 0.00 4.35
4135 11961 5.941733 TCATGCACATTCATTACACTTGTC 58.058 37.500 0.00 0.00 0.00 3.18
4136 11962 5.963176 TCATGCACATTCATTACACTTGT 57.037 34.783 0.00 0.00 0.00 3.16
4137 11963 7.969508 TGTTATCATGCACATTCATTACACTTG 59.030 33.333 0.00 0.00 0.00 3.16
4138 11964 8.054152 TGTTATCATGCACATTCATTACACTT 57.946 30.769 0.00 0.00 0.00 3.16
4140 11966 9.949174 TTATGTTATCATGCACATTCATTACAC 57.051 29.630 9.45 0.00 35.24 2.90
4152 11978 9.247126 CCGAAATTTCATTTATGTTATCATGCA 57.753 29.630 17.99 0.00 35.70 3.96
4153 11979 9.248291 ACCGAAATTTCATTTATGTTATCATGC 57.752 29.630 17.99 0.00 35.70 4.06
4162 11988 9.158364 CGTATTCTCACCGAAATTTCATTTATG 57.842 33.333 17.99 8.06 34.79 1.90
4163 11989 8.889717 ACGTATTCTCACCGAAATTTCATTTAT 58.110 29.630 17.99 4.67 34.79 1.40
4164 11990 8.172484 CACGTATTCTCACCGAAATTTCATTTA 58.828 33.333 17.99 0.28 34.79 1.40
4167 11993 5.447279 GCACGTATTCTCACCGAAATTTCAT 60.447 40.000 17.99 2.68 34.79 2.57
4168 11994 4.142988 GCACGTATTCTCACCGAAATTTCA 60.143 41.667 17.99 0.00 34.79 2.69
4169 11995 4.092968 AGCACGTATTCTCACCGAAATTTC 59.907 41.667 8.20 8.20 34.79 2.17
4170 11996 4.000988 AGCACGTATTCTCACCGAAATTT 58.999 39.130 0.00 0.00 34.79 1.82
4171 11997 3.596214 AGCACGTATTCTCACCGAAATT 58.404 40.909 0.00 0.00 34.79 1.82
4172 11998 3.247006 AGCACGTATTCTCACCGAAAT 57.753 42.857 0.00 0.00 34.79 2.17
4173 11999 2.736144 AGCACGTATTCTCACCGAAA 57.264 45.000 0.00 0.00 34.79 3.46
4175 12001 1.135199 GGAAGCACGTATTCTCACCGA 60.135 52.381 11.25 0.00 0.00 4.69
4176 12002 1.135083 AGGAAGCACGTATTCTCACCG 60.135 52.381 11.25 0.00 0.00 4.94
4179 12005 3.953712 TTGAGGAAGCACGTATTCTCA 57.046 42.857 11.25 7.21 0.00 3.27
4180 12006 5.803020 AATTTGAGGAAGCACGTATTCTC 57.197 39.130 11.25 4.98 0.00 2.87
4181 12007 6.316390 CCTAAATTTGAGGAAGCACGTATTCT 59.684 38.462 0.00 0.00 35.99 2.40
4182 12008 6.487103 CCTAAATTTGAGGAAGCACGTATTC 58.513 40.000 0.00 4.50 35.99 1.75
4183 12009 5.163652 GCCTAAATTTGAGGAAGCACGTATT 60.164 40.000 3.73 0.00 35.99 1.89
4184 12010 4.335594 GCCTAAATTTGAGGAAGCACGTAT 59.664 41.667 3.73 0.00 35.99 3.06
4186 12012 2.488153 GCCTAAATTTGAGGAAGCACGT 59.512 45.455 3.73 0.00 35.99 4.49
4187 12013 2.749621 AGCCTAAATTTGAGGAAGCACG 59.250 45.455 3.73 0.00 35.99 5.34
4188 12014 4.790765 AAGCCTAAATTTGAGGAAGCAC 57.209 40.909 3.73 0.00 35.99 4.40
4190 12016 4.389992 GCAAAAGCCTAAATTTGAGGAAGC 59.610 41.667 3.73 0.00 38.50 3.86
4191 12017 4.622740 CGCAAAAGCCTAAATTTGAGGAAG 59.377 41.667 3.73 0.00 38.50 3.46
4192 12018 4.038642 ACGCAAAAGCCTAAATTTGAGGAA 59.961 37.500 3.73 0.00 39.61 3.36
4193 12019 3.572255 ACGCAAAAGCCTAAATTTGAGGA 59.428 39.130 3.73 0.00 39.61 3.71
4194 12020 3.913089 ACGCAAAAGCCTAAATTTGAGG 58.087 40.909 0.00 5.29 39.61 3.86
4195 12021 3.920412 GGACGCAAAAGCCTAAATTTGAG 59.080 43.478 0.00 1.98 40.64 3.02
4196 12022 3.572255 AGGACGCAAAAGCCTAAATTTGA 59.428 39.130 0.00 0.00 38.50 2.69
4197 12023 3.913089 AGGACGCAAAAGCCTAAATTTG 58.087 40.909 0.00 0.00 39.08 2.32
4198 12024 4.306600 CAAGGACGCAAAAGCCTAAATTT 58.693 39.130 0.00 0.00 0.00 1.82
4199 12025 3.306019 CCAAGGACGCAAAAGCCTAAATT 60.306 43.478 0.00 0.00 0.00 1.82
4201 12027 1.611491 CCAAGGACGCAAAAGCCTAAA 59.389 47.619 0.00 0.00 0.00 1.85
4202 12028 1.243902 CCAAGGACGCAAAAGCCTAA 58.756 50.000 0.00 0.00 0.00 2.69
4203 12029 1.241315 GCCAAGGACGCAAAAGCCTA 61.241 55.000 0.00 0.00 0.00 3.93
4204 12030 2.564721 GCCAAGGACGCAAAAGCCT 61.565 57.895 0.00 0.00 0.00 4.58
4205 12031 2.049156 GCCAAGGACGCAAAAGCC 60.049 61.111 0.00 0.00 0.00 4.35
4206 12032 1.081175 GAGCCAAGGACGCAAAAGC 60.081 57.895 0.00 0.00 0.00 3.51
4207 12033 0.040067 GTGAGCCAAGGACGCAAAAG 60.040 55.000 0.00 0.00 0.00 2.27
4208 12034 0.465460 AGTGAGCCAAGGACGCAAAA 60.465 50.000 0.00 0.00 0.00 2.44
4212 12038 2.435059 GGAGTGAGCCAAGGACGC 60.435 66.667 0.00 0.00 0.00 5.19
4213 12039 2.266055 GGGAGTGAGCCAAGGACG 59.734 66.667 0.00 0.00 0.00 4.79
4214 12040 1.003233 GTGGGAGTGAGCCAAGGAC 60.003 63.158 0.00 0.00 0.00 3.85
4216 12042 1.002868 CAGTGGGAGTGAGCCAAGG 60.003 63.158 0.00 0.00 0.00 3.61
4217 12043 0.617413 ATCAGTGGGAGTGAGCCAAG 59.383 55.000 0.00 0.00 29.98 3.61
4218 12044 1.833630 CTATCAGTGGGAGTGAGCCAA 59.166 52.381 0.00 0.00 29.98 4.52
4222 12048 2.593346 GCACTATCAGTGGGAGTGAG 57.407 55.000 22.24 4.63 46.01 3.51
4229 12055 3.742882 CACATTATCCGCACTATCAGTGG 59.257 47.826 8.31 0.00 46.01 4.00
4231 12057 4.584743 TCTCACATTATCCGCACTATCAGT 59.415 41.667 0.00 0.00 0.00 3.41
4232 12058 5.126396 TCTCACATTATCCGCACTATCAG 57.874 43.478 0.00 0.00 0.00 2.90
4233 12059 4.559502 GCTCTCACATTATCCGCACTATCA 60.560 45.833 0.00 0.00 0.00 2.15
4234 12060 3.923461 GCTCTCACATTATCCGCACTATC 59.077 47.826 0.00 0.00 0.00 2.08
4235 12061 3.306364 GGCTCTCACATTATCCGCACTAT 60.306 47.826 0.00 0.00 0.00 2.12
4236 12062 2.035961 GGCTCTCACATTATCCGCACTA 59.964 50.000 0.00 0.00 0.00 2.74
4237 12063 1.202580 GGCTCTCACATTATCCGCACT 60.203 52.381 0.00 0.00 0.00 4.40
4238 12064 1.221414 GGCTCTCACATTATCCGCAC 58.779 55.000 0.00 0.00 0.00 5.34
4239 12065 0.829990 TGGCTCTCACATTATCCGCA 59.170 50.000 0.00 0.00 0.00 5.69
4240 12066 1.802960 CATGGCTCTCACATTATCCGC 59.197 52.381 0.00 0.00 0.00 5.54
4241 12067 1.802960 GCATGGCTCTCACATTATCCG 59.197 52.381 0.00 0.00 0.00 4.18
4242 12068 2.157738 GGCATGGCTCTCACATTATCC 58.842 52.381 12.86 0.00 0.00 2.59
4243 12069 2.157738 GGGCATGGCTCTCACATTATC 58.842 52.381 19.78 0.00 0.00 1.75
4245 12071 0.183492 GGGGCATGGCTCTCACATTA 59.817 55.000 19.78 0.00 0.00 1.90
4246 12072 1.076485 GGGGCATGGCTCTCACATT 60.076 57.895 19.78 0.00 0.00 2.71
4247 12073 2.599597 GGGGCATGGCTCTCACAT 59.400 61.111 19.78 0.00 0.00 3.21
4248 12074 4.100084 CGGGGCATGGCTCTCACA 62.100 66.667 18.14 0.00 0.00 3.58
4249 12075 2.819984 TTTCGGGGCATGGCTCTCAC 62.820 60.000 18.14 0.36 0.00 3.51
4250 12076 2.541547 CTTTCGGGGCATGGCTCTCA 62.542 60.000 18.14 0.00 0.00 3.27
4251 12077 1.821332 CTTTCGGGGCATGGCTCTC 60.821 63.158 18.14 7.56 0.00 3.20
4254 12080 2.044946 GACTTTCGGGGCATGGCT 60.045 61.111 19.78 0.00 0.00 4.75
4255 12081 2.361104 TGACTTTCGGGGCATGGC 60.361 61.111 11.56 11.56 0.00 4.40
4256 12082 1.750399 CCTGACTTTCGGGGCATGG 60.750 63.158 0.00 0.00 39.28 3.66
4258 12084 2.044946 GCCTGACTTTCGGGGCAT 60.045 61.111 3.20 0.00 43.24 4.40
4259 12085 3.249189 AGCCTGACTTTCGGGGCA 61.249 61.111 5.62 0.00 43.24 5.36
4260 12086 2.747855 CAGCCTGACTTTCGGGGC 60.748 66.667 3.20 3.00 43.24 5.80
4261 12087 1.550130 TACCAGCCTGACTTTCGGGG 61.550 60.000 3.20 0.00 43.24 5.73
4262 12088 0.391263 GTACCAGCCTGACTTTCGGG 60.391 60.000 0.00 0.00 45.82 5.14
4263 12089 0.608640 AGTACCAGCCTGACTTTCGG 59.391 55.000 0.00 0.00 0.00 4.30
4265 12091 3.618690 ATGAGTACCAGCCTGACTTTC 57.381 47.619 0.00 0.00 0.00 2.62
4266 12092 4.101741 GGATATGAGTACCAGCCTGACTTT 59.898 45.833 0.00 0.00 0.00 2.66
4267 12093 3.643792 GGATATGAGTACCAGCCTGACTT 59.356 47.826 0.00 0.00 0.00 3.01
4268 12094 3.235200 GGATATGAGTACCAGCCTGACT 58.765 50.000 0.00 0.00 0.00 3.41
4269 12095 2.300437 GGGATATGAGTACCAGCCTGAC 59.700 54.545 0.00 0.00 0.00 3.51
4270 12096 2.180086 AGGGATATGAGTACCAGCCTGA 59.820 50.000 0.00 0.00 0.00 3.86
4271 12097 2.614259 AGGGATATGAGTACCAGCCTG 58.386 52.381 0.00 0.00 0.00 4.85
4274 12100 4.323104 GGATGAAGGGATATGAGTACCAGC 60.323 50.000 0.00 0.00 0.00 4.85
4275 12101 4.081972 CGGATGAAGGGATATGAGTACCAG 60.082 50.000 0.00 0.00 0.00 4.00
4276 12102 3.832490 CGGATGAAGGGATATGAGTACCA 59.168 47.826 0.00 0.00 0.00 3.25
4277 12103 4.087182 TCGGATGAAGGGATATGAGTACC 58.913 47.826 0.00 0.00 0.00 3.34
4278 12104 5.010933 TCTCGGATGAAGGGATATGAGTAC 58.989 45.833 0.00 0.00 0.00 2.73
4279 12105 5.010933 GTCTCGGATGAAGGGATATGAGTA 58.989 45.833 0.00 0.00 0.00 2.59
4283 12109 5.984695 TTAGTCTCGGATGAAGGGATATG 57.015 43.478 0.00 0.00 0.00 1.78
4284 12110 5.423610 CCATTAGTCTCGGATGAAGGGATAT 59.576 44.000 0.00 0.00 0.00 1.63
4285 12111 4.772624 CCATTAGTCTCGGATGAAGGGATA 59.227 45.833 0.00 0.00 0.00 2.59
4286 12112 3.580458 CCATTAGTCTCGGATGAAGGGAT 59.420 47.826 0.00 0.00 0.00 3.85
4290 12116 5.665459 AGTTTCCATTAGTCTCGGATGAAG 58.335 41.667 0.00 0.00 0.00 3.02
4291 12117 5.677319 AGTTTCCATTAGTCTCGGATGAA 57.323 39.130 0.00 0.00 0.00 2.57
4292 12118 5.661458 GAAGTTTCCATTAGTCTCGGATGA 58.339 41.667 0.00 0.00 0.00 2.92
4293 12119 4.504461 CGAAGTTTCCATTAGTCTCGGATG 59.496 45.833 0.00 0.00 0.00 3.51
4294 12120 4.159879 ACGAAGTTTCCATTAGTCTCGGAT 59.840 41.667 0.00 0.00 37.78 4.18
4295 12121 3.508793 ACGAAGTTTCCATTAGTCTCGGA 59.491 43.478 0.00 0.00 37.78 4.55
4296 12122 3.846360 ACGAAGTTTCCATTAGTCTCGG 58.154 45.455 0.00 0.00 37.78 4.63
4312 12138 2.355132 ACGTACAGATAGCCAGACGAAG 59.645 50.000 3.55 0.00 34.54 3.79
4313 12139 2.353889 GACGTACAGATAGCCAGACGAA 59.646 50.000 3.55 0.00 34.54 3.85
4314 12140 1.938577 GACGTACAGATAGCCAGACGA 59.061 52.381 3.55 0.00 34.54 4.20
4316 12142 2.022195 TGGACGTACAGATAGCCAGAC 58.978 52.381 0.00 0.00 0.00 3.51
4317 12143 2.430248 TGGACGTACAGATAGCCAGA 57.570 50.000 0.00 0.00 0.00 3.86
4318 12144 3.384668 CATTGGACGTACAGATAGCCAG 58.615 50.000 0.00 0.00 0.00 4.85
4319 12145 2.102420 CCATTGGACGTACAGATAGCCA 59.898 50.000 0.00 0.00 0.00 4.75
4321 12147 3.728076 TCCATTGGACGTACAGATAGC 57.272 47.619 0.00 0.00 0.00 2.97
4322 12148 5.006153 TGTTCCATTGGACGTACAGATAG 57.994 43.478 4.45 0.00 0.00 2.08
4323 12149 5.408880 TTGTTCCATTGGACGTACAGATA 57.591 39.130 4.45 0.00 0.00 1.98
4324 12150 3.973206 TGTTCCATTGGACGTACAGAT 57.027 42.857 4.45 0.00 0.00 2.90
4325 12151 3.755112 TTGTTCCATTGGACGTACAGA 57.245 42.857 4.45 0.00 0.00 3.41
4326 12152 3.374058 GGATTGTTCCATTGGACGTACAG 59.626 47.826 4.45 0.00 42.12 2.74
4327 12153 3.008594 AGGATTGTTCCATTGGACGTACA 59.991 43.478 4.45 0.00 45.30 2.90
4328 12154 3.606687 AGGATTGTTCCATTGGACGTAC 58.393 45.455 4.45 1.78 45.30 3.67
4329 12155 3.370103 GGAGGATTGTTCCATTGGACGTA 60.370 47.826 4.45 0.00 45.30 3.57
4330 12156 2.618045 GGAGGATTGTTCCATTGGACGT 60.618 50.000 4.45 0.00 45.30 4.34
4331 12157 2.017049 GGAGGATTGTTCCATTGGACG 58.983 52.381 4.45 0.00 45.30 4.79
4332 12158 2.291540 TGGGAGGATTGTTCCATTGGAC 60.292 50.000 4.45 1.74 45.30 4.02
4333 12159 1.999295 TGGGAGGATTGTTCCATTGGA 59.001 47.619 0.00 0.00 45.30 3.53
4334 12160 2.530460 TGGGAGGATTGTTCCATTGG 57.470 50.000 0.00 0.00 45.30 3.16
4335 12161 2.762327 CCTTGGGAGGATTGTTCCATTG 59.238 50.000 0.00 0.00 46.74 2.82
4336 12162 2.889756 GCCTTGGGAGGATTGTTCCATT 60.890 50.000 0.00 0.00 46.74 3.16
4337 12163 1.342374 GCCTTGGGAGGATTGTTCCAT 60.342 52.381 0.00 0.00 46.74 3.41
4338 12164 0.039618 GCCTTGGGAGGATTGTTCCA 59.960 55.000 0.00 0.00 46.74 3.53
4339 12165 1.032114 CGCCTTGGGAGGATTGTTCC 61.032 60.000 0.00 0.00 46.74 3.62
4340 12166 0.035439 TCGCCTTGGGAGGATTGTTC 60.035 55.000 0.00 0.00 46.74 3.18
4341 12167 0.035056 CTCGCCTTGGGAGGATTGTT 60.035 55.000 0.00 0.00 46.74 2.83
4342 12168 1.604378 CTCGCCTTGGGAGGATTGT 59.396 57.895 0.00 0.00 46.74 2.71
4343 12169 1.821332 GCTCGCCTTGGGAGGATTG 60.821 63.158 9.76 0.00 46.74 2.67
4344 12170 2.262774 CTGCTCGCCTTGGGAGGATT 62.263 60.000 9.76 0.00 46.74 3.01
4345 12171 2.688666 TGCTCGCCTTGGGAGGAT 60.689 61.111 9.76 0.00 46.74 3.24
4346 12172 3.393970 CTGCTCGCCTTGGGAGGA 61.394 66.667 9.76 6.29 46.74 3.71
4358 12184 0.808060 GTAGAAAGGCGAGGCTGCTC 60.808 60.000 0.00 0.68 34.52 4.26
4359 12185 1.219393 GTAGAAAGGCGAGGCTGCT 59.781 57.895 0.00 3.95 34.52 4.24
4360 12186 1.815840 GGTAGAAAGGCGAGGCTGC 60.816 63.158 0.00 0.00 0.00 5.25
4361 12187 0.460987 CTGGTAGAAAGGCGAGGCTG 60.461 60.000 0.00 0.00 0.00 4.85
4362 12188 0.614979 TCTGGTAGAAAGGCGAGGCT 60.615 55.000 0.00 0.00 0.00 4.58
4363 12189 0.460459 GTCTGGTAGAAAGGCGAGGC 60.460 60.000 0.00 0.00 0.00 4.70
4364 12190 0.895530 TGTCTGGTAGAAAGGCGAGG 59.104 55.000 0.00 0.00 0.00 4.63
4365 12191 2.028930 ACTTGTCTGGTAGAAAGGCGAG 60.029 50.000 0.00 0.00 36.91 5.03
4366 12192 1.968493 ACTTGTCTGGTAGAAAGGCGA 59.032 47.619 0.00 0.00 0.00 5.54
4367 12193 2.457366 ACTTGTCTGGTAGAAAGGCG 57.543 50.000 0.00 0.00 0.00 5.52
4368 12194 5.524281 GCTAATACTTGTCTGGTAGAAAGGC 59.476 44.000 0.00 0.00 0.00 4.35
4369 12195 6.879400 AGCTAATACTTGTCTGGTAGAAAGG 58.121 40.000 0.00 0.00 0.00 3.11


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.