Multiple sequence alignment - TraesCS4D01G237900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G237900 chr4D 100.000 5012 0 0 1 5012 399973559 399968548 0.000000e+00 9256
1 TraesCS4D01G237900 chr4A 86.379 3245 279 77 104 3240 58224431 58221242 0.000000e+00 3393
2 TraesCS4D01G237900 chr4A 90.711 872 67 6 3236 4101 58221213 58220350 0.000000e+00 1149
3 TraesCS4D01G237900 chr4A 92.593 216 8 1 4203 4418 58220090 58219883 2.270000e-78 303
4 TraesCS4D01G237900 chr4B 91.801 2110 120 12 1153 3234 494588941 494586857 0.000000e+00 2889
5 TraesCS4D01G237900 chr4B 89.111 1249 88 17 3236 4455 494586822 494585593 0.000000e+00 1509
6 TraesCS4D01G237900 chr4B 91.545 343 12 8 813 1150 494589308 494588978 1.640000e-124 457
7 TraesCS4D01G237900 chr4B 88.384 198 18 2 4814 5011 494243244 494243052 3.020000e-57 233
8 TraesCS4D01G237900 chr6B 82.619 443 50 10 2468 2886 322066400 322065961 2.850000e-97 366
9 TraesCS4D01G237900 chr1D 82.965 317 43 10 2114 2427 340322918 340322610 4.940000e-70 276
10 TraesCS4D01G237900 chr1D 85.567 194 21 5 1373 1561 340323192 340323001 3.960000e-46 196
11 TraesCS4D01G237900 chr2B 85.714 147 20 1 2741 2886 403423959 403424105 2.420000e-33 154


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G237900 chr4D 399968548 399973559 5011 True 9256.000000 9256 100.000000 1 5012 1 chr4D.!!$R1 5011
1 TraesCS4D01G237900 chr4A 58219883 58224431 4548 True 1615.000000 3393 89.894333 104 4418 3 chr4A.!!$R1 4314
2 TraesCS4D01G237900 chr4B 494585593 494589308 3715 True 1618.333333 2889 90.819000 813 4455 3 chr4B.!!$R2 3642
3 TraesCS4D01G237900 chr1D 340322610 340323192 582 True 236.000000 276 84.266000 1373 2427 2 chr1D.!!$R1 1054

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
322 324 0.179468 TATTGCGCTTAGTGACCCCC 59.821 55.0 9.73 0.0 0.0 5.40 F
1025 1089 0.560688 ACTCATCTCTCCCCTCTCCC 59.439 60.0 0.00 0.0 0.0 4.30 F
2308 2423 0.318441 TTCTCTCCTCAACGCCTGTG 59.682 55.0 0.00 0.0 0.0 3.66 F
3385 3563 0.237498 GAAAGCCAAGAAACCGGTCG 59.763 55.0 8.04 0.0 0.0 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1703 1810 0.259065 TACCTCAGATGAGTCGGCCT 59.741 55.0 0.00 0.0 40.48 5.19 R
2650 2768 0.110823 CCGTTACTTGCGTTGTCTGC 60.111 55.0 0.00 0.0 0.00 4.26 R
3793 3977 0.179094 TGTACATCGCCCGCTTTAGG 60.179 55.0 0.00 0.0 0.00 2.69 R
4485 4846 0.035439 GTGCAACTAAGGGCTAGGCA 60.035 55.0 19.14 0.0 31.14 4.75 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
39 40 9.985730 ATGTTGATCATGTACTTGAAAAATGTT 57.014 25.926 14.70 0.00 35.19 2.71
40 41 9.462174 TGTTGATCATGTACTTGAAAAATGTTC 57.538 29.630 14.70 7.27 0.00 3.18
41 42 8.629986 GTTGATCATGTACTTGAAAAATGTTCG 58.370 33.333 14.70 0.00 0.00 3.95
42 43 8.093659 TGATCATGTACTTGAAAAATGTTCGA 57.906 30.769 14.70 0.00 0.00 3.71
43 44 8.729756 TGATCATGTACTTGAAAAATGTTCGAT 58.270 29.630 14.70 0.00 0.00 3.59
180 181 3.434641 AGAGACAGTTCATCGTGCATTTG 59.565 43.478 0.00 0.00 0.00 2.32
195 196 4.566360 GTGCATTTGAAAATAATCACCCCG 59.434 41.667 0.00 0.00 0.00 5.73
200 201 6.896021 TTTGAAAATAATCACCCCGTAACA 57.104 33.333 0.00 0.00 0.00 2.41
204 205 7.723324 TGAAAATAATCACCCCGTAACAAAAA 58.277 30.769 0.00 0.00 0.00 1.94
211 212 5.131784 TCACCCCGTAACAAAAAGTATGTT 58.868 37.500 0.00 0.00 33.42 2.71
219 220 6.291374 CGTAACAAAAAGTATGTTTGGTGTGC 60.291 38.462 0.00 0.00 44.49 4.57
222 223 6.214205 CAAAAAGTATGTTTGGTGTGCATC 57.786 37.500 0.00 0.00 39.65 3.91
223 224 4.519540 AAAGTATGTTTGGTGTGCATCC 57.480 40.909 0.00 0.00 0.00 3.51
224 225 2.083774 AGTATGTTTGGTGTGCATCCG 58.916 47.619 0.00 0.00 0.00 4.18
228 229 1.336440 TGTTTGGTGTGCATCCGAAAG 59.664 47.619 12.98 0.00 31.12 2.62
230 231 2.198827 TTGGTGTGCATCCGAAAGAT 57.801 45.000 0.00 0.00 34.66 2.40
291 293 2.250031 TGTCTTAGTGCGGGGAACTTA 58.750 47.619 0.00 0.00 0.00 2.24
292 294 2.835764 TGTCTTAGTGCGGGGAACTTAT 59.164 45.455 0.00 0.00 0.00 1.73
299 301 3.391296 AGTGCGGGGAACTTATATGTGAT 59.609 43.478 0.00 0.00 0.00 3.06
305 307 6.173339 CGGGGAACTTATATGTGATGCTTAT 58.827 40.000 0.00 0.00 0.00 1.73
309 311 7.017645 GGAACTTATATGTGATGCTTATTGCG 58.982 38.462 0.00 0.00 46.63 4.85
310 312 5.931532 ACTTATATGTGATGCTTATTGCGC 58.068 37.500 0.00 0.00 46.63 6.09
311 313 5.702670 ACTTATATGTGATGCTTATTGCGCT 59.297 36.000 9.73 0.00 46.63 5.92
312 314 6.205464 ACTTATATGTGATGCTTATTGCGCTT 59.795 34.615 9.73 0.00 46.63 4.68
314 316 3.950087 TGTGATGCTTATTGCGCTTAG 57.050 42.857 9.73 1.41 46.63 2.18
315 317 3.270027 TGTGATGCTTATTGCGCTTAGT 58.730 40.909 9.73 0.00 46.63 2.24
316 318 3.063861 TGTGATGCTTATTGCGCTTAGTG 59.936 43.478 9.73 0.00 46.63 2.74
317 319 3.309682 GTGATGCTTATTGCGCTTAGTGA 59.690 43.478 9.73 0.00 46.63 3.41
318 320 3.309682 TGATGCTTATTGCGCTTAGTGAC 59.690 43.478 9.73 0.00 46.63 3.67
319 321 2.006888 TGCTTATTGCGCTTAGTGACC 58.993 47.619 9.73 0.00 46.63 4.02
320 322 1.330829 GCTTATTGCGCTTAGTGACCC 59.669 52.381 9.73 0.00 0.00 4.46
322 324 0.179468 TATTGCGCTTAGTGACCCCC 59.821 55.000 9.73 0.00 0.00 5.40
323 325 2.869503 ATTGCGCTTAGTGACCCCCG 62.870 60.000 9.73 0.00 0.00 5.73
324 326 3.766691 GCGCTTAGTGACCCCCGA 61.767 66.667 0.00 0.00 0.00 5.14
325 327 2.183555 CGCTTAGTGACCCCCGAC 59.816 66.667 0.00 0.00 0.00 4.79
327 329 1.033746 CGCTTAGTGACCCCCGACTA 61.034 60.000 0.00 0.00 0.00 2.59
328 330 0.745468 GCTTAGTGACCCCCGACTAG 59.255 60.000 0.00 0.00 0.00 2.57
329 331 1.400737 CTTAGTGACCCCCGACTAGG 58.599 60.000 0.00 0.00 40.63 3.02
341 364 2.690881 ACTAGGCCGGCCCATTGA 60.691 61.111 41.72 20.53 36.58 2.57
349 372 2.877691 GGCCCATTGACGCAGAAC 59.122 61.111 0.00 0.00 0.00 3.01
351 374 1.648467 GGCCCATTGACGCAGAACTC 61.648 60.000 0.00 0.00 0.00 3.01
352 375 0.955428 GCCCATTGACGCAGAACTCA 60.955 55.000 0.00 0.00 0.00 3.41
355 378 1.466167 CCATTGACGCAGAACTCAAGG 59.534 52.381 0.00 0.00 30.04 3.61
361 384 0.605589 CGCAGAACTCAAGGGACTCT 59.394 55.000 0.00 0.00 38.49 3.24
366 389 4.252073 CAGAACTCAAGGGACTCTGAATG 58.748 47.826 0.00 0.00 38.49 2.67
367 390 4.020751 CAGAACTCAAGGGACTCTGAATGA 60.021 45.833 0.00 0.00 38.49 2.57
369 392 5.250313 AGAACTCAAGGGACTCTGAATGAAT 59.750 40.000 0.00 0.00 38.49 2.57
425 448 7.891498 TTTCTAGGGTTTTTAGCTTTCAAGT 57.109 32.000 0.00 0.00 0.00 3.16
426 449 7.506328 TTCTAGGGTTTTTAGCTTTCAAGTC 57.494 36.000 0.00 0.00 0.00 3.01
427 450 4.830826 AGGGTTTTTAGCTTTCAAGTCG 57.169 40.909 0.00 0.00 0.00 4.18
428 451 4.204799 AGGGTTTTTAGCTTTCAAGTCGT 58.795 39.130 0.00 0.00 0.00 4.34
513 537 3.931578 ACGCTCTATGAGAAAAGTGCTT 58.068 40.909 0.00 0.00 31.67 3.91
515 539 4.390297 ACGCTCTATGAGAAAAGTGCTTTC 59.610 41.667 0.00 0.00 43.36 2.62
647 674 9.787532 TTTTCCAAATTCTGCGAATATCTTTAG 57.212 29.630 4.60 0.00 0.00 1.85
809 838 4.898829 ACCAACCGGTAAAGTAAACAAC 57.101 40.909 8.00 0.00 46.71 3.32
944 1006 0.994995 CTCATGAGAAGTTGTCGCCG 59.005 55.000 18.34 0.00 0.00 6.46
1008 1072 2.240667 CCCCTTCAGATCCATGTCAACT 59.759 50.000 0.00 0.00 0.00 3.16
1025 1089 0.560688 ACTCATCTCTCCCCTCTCCC 59.439 60.000 0.00 0.00 0.00 4.30
1026 1090 0.859760 CTCATCTCTCCCCTCTCCCT 59.140 60.000 0.00 0.00 0.00 4.20
1027 1091 0.856982 TCATCTCTCCCCTCTCCCTC 59.143 60.000 0.00 0.00 0.00 4.30
1028 1092 0.859760 CATCTCTCCCCTCTCCCTCT 59.140 60.000 0.00 0.00 0.00 3.69
1062 1126 3.879295 AGGTACATTCATTCAGGCATTCG 59.121 43.478 0.00 0.00 0.00 3.34
1169 1267 7.069877 ACCATGCATCATAATATGGCTTTTT 57.930 32.000 0.00 0.00 42.98 1.94
1660 1767 2.106332 GACGCGGTGTATGGGAGG 59.894 66.667 12.47 0.00 0.00 4.30
1684 1791 1.219393 GGTGGAGCTACTGAGTGCC 59.781 63.158 0.00 0.00 0.00 5.01
1692 1799 2.919856 ACTGAGTGCCTGCTCGGT 60.920 61.111 8.21 8.21 46.81 4.69
1759 1866 2.935481 CTCAGGGACAAGGGGGCA 60.935 66.667 0.00 0.00 0.00 5.36
1792 1899 1.739562 GCAGCAGTCCTTCGTCCTG 60.740 63.158 0.00 0.00 0.00 3.86
1807 1914 1.137872 GTCCTGGACTGCCTGATACTG 59.862 57.143 19.53 0.00 35.28 2.74
2092 2207 1.747355 GTGATCAAGGCTGACATTGGG 59.253 52.381 0.00 0.00 33.30 4.12
2207 2322 4.307432 CTTTCTACAGTCCAACATGACGT 58.693 43.478 0.00 0.00 40.26 4.34
2218 2333 4.272504 TCCAACATGACGTTTTTCACTCTC 59.727 41.667 0.00 0.00 34.86 3.20
2301 2416 6.716934 TGAGGTATACATTCTCTCCTCAAC 57.283 41.667 5.01 0.00 45.23 3.18
2308 2423 0.318441 TTCTCTCCTCAACGCCTGTG 59.682 55.000 0.00 0.00 0.00 3.66
2353 2471 4.539509 ACAAGTGTTCGCGTAATGAAAA 57.460 36.364 5.77 0.00 0.00 2.29
2354 2472 5.103290 ACAAGTGTTCGCGTAATGAAAAT 57.897 34.783 5.77 0.00 0.00 1.82
2363 2481 5.112307 CGCGTAATGAAAATTTGCGAATT 57.888 34.783 6.06 6.06 46.29 2.17
2368 2486 7.665471 CGTAATGAAAATTTGCGAATTCATGT 58.335 30.769 12.38 7.36 40.58 3.21
2370 2488 9.885743 GTAATGAAAATTTGCGAATTCATGTAC 57.114 29.630 12.38 12.77 40.58 2.90
2427 2545 2.499289 AGATGAAAGCCATGACGAGAGT 59.501 45.455 0.00 0.00 41.32 3.24
2442 2560 2.690497 CGAGAGTGAGCTTTCCTCCATA 59.310 50.000 0.00 0.00 39.98 2.74
2512 2630 8.277197 AGGATTCAGATTTTGACCAAGATGATA 58.723 33.333 0.00 0.00 34.94 2.15
2549 2667 1.800805 ACTTCACGGCAAGATCACTG 58.199 50.000 0.00 0.00 0.00 3.66
2551 2669 1.728971 CTTCACGGCAAGATCACTGTC 59.271 52.381 0.00 0.00 0.00 3.51
2553 2671 1.073964 CACGGCAAGATCACTGTCAG 58.926 55.000 0.00 0.00 0.00 3.51
2561 2679 1.554160 AGATCACTGTCAGGAGCCAAG 59.446 52.381 4.53 0.00 0.00 3.61
2578 2696 1.193203 CAAGCACTAACACAGAGCACG 59.807 52.381 0.00 0.00 42.75 5.34
2697 2815 4.098914 TGACAAGGGAAACATTAGCACT 57.901 40.909 0.00 0.00 29.99 4.40
2815 2957 2.217750 TCGTTCCCACAACAAGACATG 58.782 47.619 0.00 0.00 0.00 3.21
2860 3002 9.605275 CAGATATCCAAGAAAACAGAAGTGATA 57.395 33.333 0.00 0.00 0.00 2.15
2973 3115 4.592942 CAGTTCCCATCATCAGGAAGAAA 58.407 43.478 0.00 0.00 42.74 2.52
2975 3117 5.012893 AGTTCCCATCATCAGGAAGAAAAC 58.987 41.667 0.00 0.00 42.74 2.43
2984 3126 2.299297 TCAGGAAGAAAACGAGGAGACC 59.701 50.000 0.00 0.00 0.00 3.85
2985 3127 2.037251 CAGGAAGAAAACGAGGAGACCA 59.963 50.000 0.00 0.00 0.00 4.02
2986 3128 2.300437 AGGAAGAAAACGAGGAGACCAG 59.700 50.000 0.00 0.00 0.00 4.00
3033 3175 1.400629 CCTGCAACATCAAAGACGCTG 60.401 52.381 0.00 0.00 0.00 5.18
3086 3228 6.832520 TGTTGCAGCTTATAATTCTTCCAA 57.167 33.333 1.17 0.00 0.00 3.53
3103 3245 6.182627 TCTTCCAATAACAGCACATCTCAAT 58.817 36.000 0.00 0.00 0.00 2.57
3107 3249 6.433716 TCCAATAACAGCACATCTCAATCAAA 59.566 34.615 0.00 0.00 0.00 2.69
3112 3254 4.454847 ACAGCACATCTCAATCAAAGACAG 59.545 41.667 0.00 0.00 0.00 3.51
3292 3470 0.960364 TTTGACCCGGCAAGCATCTC 60.960 55.000 0.00 0.00 0.00 2.75
3294 3472 3.329542 GACCCGGCAAGCATCTCCA 62.330 63.158 0.00 0.00 0.00 3.86
3297 3475 1.895707 CCGGCAAGCATCTCCATCC 60.896 63.158 0.00 0.00 0.00 3.51
3300 3478 1.772836 GGCAAGCATCTCCATCCTTT 58.227 50.000 0.00 0.00 0.00 3.11
3347 3525 3.102097 CCAAGAAGCCGGCGAATC 58.898 61.111 23.20 20.39 0.00 2.52
3381 3559 1.604604 TGGAGAAAGCCAAGAAACCG 58.395 50.000 0.00 0.00 34.31 4.44
3385 3563 0.237498 GAAAGCCAAGAAACCGGTCG 59.763 55.000 8.04 0.00 0.00 4.79
3404 3582 4.065789 GTCGTCCATTCCTCTGAAAAACT 58.934 43.478 0.00 0.00 33.32 2.66
3441 3619 2.223947 GCCAAAACAAGAATCACCGGTT 60.224 45.455 2.97 0.00 0.00 4.44
3447 3625 3.926616 ACAAGAATCACCGGTTGTAGAG 58.073 45.455 2.97 0.00 31.37 2.43
3486 3667 3.063180 GCACTCTGAAGAAATCCATGTCG 59.937 47.826 0.00 0.00 0.00 4.35
3501 3682 3.449227 TCGTCGCCGGCAATCTCT 61.449 61.111 28.98 0.00 33.95 3.10
3543 3724 1.009183 TCCCCGGGAAAGATTAGGACT 59.991 52.381 26.32 0.00 0.00 3.85
3591 3772 1.187087 CTCGTCCTAGCTCAGGGTTT 58.813 55.000 0.00 0.00 45.58 3.27
3741 3925 4.521062 GGCGCATCAGCTCCGACT 62.521 66.667 10.83 0.00 35.65 4.18
3793 3977 1.179814 ATCCCGATCTGTAGCGACCC 61.180 60.000 0.00 0.00 36.35 4.46
3797 3981 1.315690 CGATCTGTAGCGACCCCTAA 58.684 55.000 0.00 0.00 36.35 2.69
3813 3997 1.647346 CTAAAGCGGGCGATGTACAA 58.353 50.000 0.00 0.00 0.00 2.41
3866 4050 0.389948 AACCATCGAGAAGGCGTGAC 60.390 55.000 0.00 0.00 0.00 3.67
3957 4141 2.237392 AGTAGTTTCCATGTCCAGCTCC 59.763 50.000 0.00 0.00 0.00 4.70
3965 4149 2.082231 CATGTCCAGCTCCAAAGACAG 58.918 52.381 0.00 0.00 42.13 3.51
3978 4162 3.565902 CCAAAGACAGAAGAAGTGGAACC 59.434 47.826 0.00 0.00 37.80 3.62
3979 4163 4.199310 CAAAGACAGAAGAAGTGGAACCA 58.801 43.478 0.00 0.00 37.80 3.67
4013 4197 5.176592 GCCAACGAGATTAAGTTCCTAAGT 58.823 41.667 0.00 0.00 0.00 2.24
4089 4273 4.647564 AGAATGGAAATCAGTGGTCACT 57.352 40.909 0.00 0.00 43.61 3.41
4096 4280 7.108841 TGGAAATCAGTGGTCACTATACTAC 57.891 40.000 3.06 0.00 40.20 2.73
4108 4320 2.770232 ACTATACTACACTTGTGGGCCC 59.230 50.000 17.59 17.59 0.00 5.80
4115 4327 4.335647 CTTGTGGGCCCGCAGACT 62.336 66.667 35.37 0.00 37.75 3.24
4133 4345 5.978919 GCAGACTGTTGAATGTTGAATTTGA 59.021 36.000 3.99 0.00 0.00 2.69
4138 4350 8.545229 ACTGTTGAATGTTGAATTTGAAACAA 57.455 26.923 6.44 0.00 39.57 2.83
4147 4359 8.062065 TGTTGAATTTGAAACAACTTACTCCT 57.938 30.769 11.16 0.00 42.60 3.69
4162 4374 6.365520 ACTTACTCCTCTTGTTGTTCCATTT 58.634 36.000 0.00 0.00 0.00 2.32
4163 4375 6.486993 ACTTACTCCTCTTGTTGTTCCATTTC 59.513 38.462 0.00 0.00 0.00 2.17
4174 4386 6.966021 TGTTGTTCCATTTCTAAACTACTGC 58.034 36.000 0.00 0.00 32.36 4.40
4178 4390 9.515226 TTGTTCCATTTCTAAACTACTGCTTAT 57.485 29.630 0.00 0.00 0.00 1.73
4328 4689 1.447317 CTTGCAACAGCGGTGACCTT 61.447 55.000 23.44 1.82 0.00 3.50
4425 4786 6.623486 CAGCAACAATTGGATTTCACTATGA 58.377 36.000 10.83 0.00 0.00 2.15
4431 4792 8.230472 ACAATTGGATTTCACTATGAGGATTC 57.770 34.615 10.83 0.00 0.00 2.52
4437 4798 7.127186 TGGATTTCACTATGAGGATTCCTTACA 59.873 37.037 6.68 1.36 31.76 2.41
4443 4804 8.642432 TCACTATGAGGATTCCTTACAACTATG 58.358 37.037 6.68 0.00 31.76 2.23
4449 4810 7.069578 TGAGGATTCCTTACAACTATGGTAGTC 59.930 40.741 6.68 0.00 33.49 2.59
4455 4816 0.874607 CAACTATGGTAGTCGGCGCC 60.875 60.000 19.07 19.07 38.26 6.53
4456 4817 1.041447 AACTATGGTAGTCGGCGCCT 61.041 55.000 26.68 8.66 38.26 5.52
4457 4818 0.179009 ACTATGGTAGTCGGCGCCTA 60.179 55.000 26.68 11.79 32.47 3.93
4458 4819 0.522180 CTATGGTAGTCGGCGCCTAG 59.478 60.000 26.68 12.74 0.00 3.02
4459 4820 0.179009 TATGGTAGTCGGCGCCTAGT 60.179 55.000 26.68 19.72 0.00 2.57
4460 4821 0.179009 ATGGTAGTCGGCGCCTAGTA 60.179 55.000 26.68 18.51 0.00 1.82
4461 4822 0.179009 TGGTAGTCGGCGCCTAGTAT 60.179 55.000 26.68 8.31 0.00 2.12
4462 4823 0.520847 GGTAGTCGGCGCCTAGTATC 59.479 60.000 26.68 17.69 0.00 2.24
4463 4824 0.165511 GTAGTCGGCGCCTAGTATCG 59.834 60.000 26.68 9.46 0.00 2.92
4464 4825 0.250038 TAGTCGGCGCCTAGTATCGT 60.250 55.000 26.68 2.49 0.00 3.73
4465 4826 0.250038 AGTCGGCGCCTAGTATCGTA 60.250 55.000 26.68 0.00 0.00 3.43
4466 4827 0.165511 GTCGGCGCCTAGTATCGTAG 59.834 60.000 26.68 4.37 0.00 3.51
4467 4828 1.154263 CGGCGCCTAGTATCGTAGC 60.154 63.158 26.68 0.00 0.00 3.58
4468 4829 1.848932 CGGCGCCTAGTATCGTAGCA 61.849 60.000 26.68 0.00 0.00 3.49
4469 4830 0.313043 GGCGCCTAGTATCGTAGCAA 59.687 55.000 22.15 0.00 0.00 3.91
4470 4831 1.406447 GCGCCTAGTATCGTAGCAAC 58.594 55.000 0.00 0.00 0.00 4.17
4471 4832 1.268896 GCGCCTAGTATCGTAGCAACA 60.269 52.381 0.00 0.00 0.00 3.33
4472 4833 2.797087 GCGCCTAGTATCGTAGCAACAA 60.797 50.000 0.00 0.00 0.00 2.83
4473 4834 3.441163 CGCCTAGTATCGTAGCAACAAA 58.559 45.455 0.00 0.00 0.00 2.83
4474 4835 3.861113 CGCCTAGTATCGTAGCAACAAAA 59.139 43.478 0.00 0.00 0.00 2.44
4475 4836 4.259690 CGCCTAGTATCGTAGCAACAAAAC 60.260 45.833 0.00 0.00 0.00 2.43
4476 4837 4.033702 GCCTAGTATCGTAGCAACAAAACC 59.966 45.833 0.00 0.00 0.00 3.27
4477 4838 4.266976 CCTAGTATCGTAGCAACAAAACCG 59.733 45.833 0.00 0.00 0.00 4.44
4478 4839 2.414138 AGTATCGTAGCAACAAAACCGC 59.586 45.455 0.00 0.00 0.00 5.68
4479 4840 1.519408 ATCGTAGCAACAAAACCGCT 58.481 45.000 0.00 0.00 39.80 5.52
4480 4841 2.151881 TCGTAGCAACAAAACCGCTA 57.848 45.000 0.00 0.00 37.20 4.26
4481 4842 2.063266 TCGTAGCAACAAAACCGCTAG 58.937 47.619 0.00 0.00 38.84 3.42
4482 4843 1.127951 CGTAGCAACAAAACCGCTAGG 59.872 52.381 0.00 0.00 38.84 3.02
4499 4860 1.670059 AGGTTTGCCTAGCCCTTAGT 58.330 50.000 0.00 0.00 44.90 2.24
4500 4861 1.993301 AGGTTTGCCTAGCCCTTAGTT 59.007 47.619 0.00 0.00 44.90 2.24
4501 4862 2.092323 GGTTTGCCTAGCCCTTAGTTG 58.908 52.381 0.00 0.00 0.00 3.16
4502 4863 1.472878 GTTTGCCTAGCCCTTAGTTGC 59.527 52.381 0.00 0.00 0.00 4.17
4503 4864 0.695924 TTGCCTAGCCCTTAGTTGCA 59.304 50.000 0.00 0.00 0.00 4.08
4504 4865 0.035439 TGCCTAGCCCTTAGTTGCAC 60.035 55.000 0.00 0.00 0.00 4.57
4505 4866 1.090052 GCCTAGCCCTTAGTTGCACG 61.090 60.000 0.00 0.00 0.00 5.34
4506 4867 0.462047 CCTAGCCCTTAGTTGCACGG 60.462 60.000 0.00 0.00 0.00 4.94
4507 4868 1.078708 TAGCCCTTAGTTGCACGGC 60.079 57.895 0.00 0.00 40.03 5.68
4508 4869 2.359975 GCCCTTAGTTGCACGGCT 60.360 61.111 0.00 0.00 36.65 5.52
4509 4870 2.690778 GCCCTTAGTTGCACGGCTG 61.691 63.158 0.00 0.00 36.65 4.85
4510 4871 2.690778 CCCTTAGTTGCACGGCTGC 61.691 63.158 0.00 0.00 44.52 5.25
4519 4880 4.671549 CACGGCTGCGTGTTGCTG 62.672 66.667 13.77 0.00 46.63 4.41
4520 4881 4.908687 ACGGCTGCGTGTTGCTGA 62.909 61.111 0.00 0.00 46.63 4.26
4521 4882 4.374702 CGGCTGCGTGTTGCTGAC 62.375 66.667 0.00 0.00 46.45 3.51
4522 4883 2.974698 GGCTGCGTGTTGCTGACT 60.975 61.111 0.00 0.00 46.41 3.41
4523 4884 2.546494 GGCTGCGTGTTGCTGACTT 61.546 57.895 0.00 0.00 46.41 3.01
4524 4885 1.356624 GCTGCGTGTTGCTGACTTT 59.643 52.632 0.00 0.00 46.63 2.66
4525 4886 0.931662 GCTGCGTGTTGCTGACTTTG 60.932 55.000 0.00 0.00 46.63 2.77
4526 4887 0.657312 CTGCGTGTTGCTGACTTTGA 59.343 50.000 0.00 0.00 46.63 2.69
4527 4888 0.376852 TGCGTGTTGCTGACTTTGAC 59.623 50.000 0.00 0.00 46.63 3.18
4528 4889 0.654472 GCGTGTTGCTGACTTTGACG 60.654 55.000 0.00 0.00 41.73 4.35
4529 4890 0.650512 CGTGTTGCTGACTTTGACGT 59.349 50.000 0.00 0.00 0.00 4.34
4530 4891 1.855978 CGTGTTGCTGACTTTGACGTA 59.144 47.619 0.00 0.00 0.00 3.57
4531 4892 2.347292 CGTGTTGCTGACTTTGACGTAC 60.347 50.000 0.00 0.00 0.00 3.67
4532 4893 2.864343 GTGTTGCTGACTTTGACGTACT 59.136 45.455 0.00 0.00 0.00 2.73
4533 4894 3.308866 GTGTTGCTGACTTTGACGTACTT 59.691 43.478 0.00 0.00 0.00 2.24
4534 4895 3.936453 TGTTGCTGACTTTGACGTACTTT 59.064 39.130 0.00 0.00 0.00 2.66
4535 4896 4.033587 TGTTGCTGACTTTGACGTACTTTC 59.966 41.667 0.00 0.00 0.00 2.62
4536 4897 2.792674 TGCTGACTTTGACGTACTTTCG 59.207 45.455 0.00 0.00 0.00 3.46
4537 4898 2.409879 GCTGACTTTGACGTACTTTCGC 60.410 50.000 0.00 0.00 0.00 4.70
4538 4899 2.792674 CTGACTTTGACGTACTTTCGCA 59.207 45.455 0.00 0.00 0.00 5.10
4539 4900 3.188492 TGACTTTGACGTACTTTCGCAA 58.812 40.909 0.00 0.00 0.00 4.85
4540 4901 3.805422 TGACTTTGACGTACTTTCGCAAT 59.195 39.130 0.00 0.00 31.50 3.56
4541 4902 4.983538 TGACTTTGACGTACTTTCGCAATA 59.016 37.500 0.00 0.00 31.50 1.90
4542 4903 5.636121 TGACTTTGACGTACTTTCGCAATAT 59.364 36.000 0.00 0.00 31.50 1.28
4543 4904 6.146510 TGACTTTGACGTACTTTCGCAATATT 59.853 34.615 0.00 0.00 31.50 1.28
4544 4905 7.328982 TGACTTTGACGTACTTTCGCAATATTA 59.671 33.333 0.00 0.00 31.50 0.98
4545 4906 8.193250 ACTTTGACGTACTTTCGCAATATTAT 57.807 30.769 0.00 0.00 31.50 1.28
4546 4907 8.662141 ACTTTGACGTACTTTCGCAATATTATT 58.338 29.630 0.00 0.00 31.50 1.40
4547 4908 9.485591 CTTTGACGTACTTTCGCAATATTATTT 57.514 29.630 0.00 0.00 31.50 1.40
4548 4909 9.828852 TTTGACGTACTTTCGCAATATTATTTT 57.171 25.926 0.00 0.00 31.50 1.82
4549 4910 8.814733 TGACGTACTTTCGCAATATTATTTTG 57.185 30.769 0.00 0.00 0.00 2.44
4550 4911 7.427030 TGACGTACTTTCGCAATATTATTTTGC 59.573 33.333 9.72 9.72 44.68 3.68
4592 4953 9.909043 AATAAAAATGAAAAACAACTACGCAAC 57.091 25.926 0.00 0.00 0.00 4.17
4593 4954 6.952935 AAAATGAAAAACAACTACGCAACA 57.047 29.167 0.00 0.00 0.00 3.33
4594 4955 6.952935 AAATGAAAAACAACTACGCAACAA 57.047 29.167 0.00 0.00 0.00 2.83
4595 4956 6.567769 AATGAAAAACAACTACGCAACAAG 57.432 33.333 0.00 0.00 0.00 3.16
4596 4957 3.854809 TGAAAAACAACTACGCAACAAGC 59.145 39.130 0.00 0.00 40.87 4.01
4597 4958 3.495670 AAAACAACTACGCAACAAGCA 57.504 38.095 0.00 0.00 46.13 3.91
4598 4959 3.708563 AAACAACTACGCAACAAGCAT 57.291 38.095 0.00 0.00 46.13 3.79
4599 4960 2.686558 ACAACTACGCAACAAGCATG 57.313 45.000 0.00 0.00 46.13 4.06
4600 4961 1.330306 CAACTACGCAACAAGCATGC 58.670 50.000 10.51 10.51 46.13 4.06
4601 4962 1.069022 CAACTACGCAACAAGCATGCT 60.069 47.619 16.30 16.30 46.13 3.79
4602 4963 2.093306 ACTACGCAACAAGCATGCTA 57.907 45.000 23.00 0.81 46.13 3.49
4603 4964 2.632377 ACTACGCAACAAGCATGCTAT 58.368 42.857 23.00 9.85 46.13 2.97
4604 4965 2.352651 ACTACGCAACAAGCATGCTATG 59.647 45.455 23.00 21.75 46.13 2.23
4605 4966 1.452110 ACGCAACAAGCATGCTATGA 58.548 45.000 23.00 0.00 46.13 2.15
4606 4967 1.811965 ACGCAACAAGCATGCTATGAA 59.188 42.857 23.00 0.00 46.13 2.57
4607 4968 2.228582 ACGCAACAAGCATGCTATGAAA 59.771 40.909 23.00 0.00 46.13 2.69
4608 4969 3.119388 ACGCAACAAGCATGCTATGAAAT 60.119 39.130 23.00 0.00 46.13 2.17
4609 4970 3.484649 CGCAACAAGCATGCTATGAAATC 59.515 43.478 23.00 6.44 46.13 2.17
4610 4971 4.426416 GCAACAAGCATGCTATGAAATCA 58.574 39.130 23.00 0.00 44.79 2.57
4611 4972 4.266976 GCAACAAGCATGCTATGAAATCAC 59.733 41.667 23.00 3.40 44.79 3.06
4612 4973 5.404096 CAACAAGCATGCTATGAAATCACA 58.596 37.500 23.00 0.00 0.00 3.58
4613 4974 5.648178 ACAAGCATGCTATGAAATCACAA 57.352 34.783 23.00 0.00 0.00 3.33
4614 4975 5.404946 ACAAGCATGCTATGAAATCACAAC 58.595 37.500 23.00 0.00 0.00 3.32
4615 4976 5.047872 ACAAGCATGCTATGAAATCACAACA 60.048 36.000 23.00 0.00 0.00 3.33
4616 4977 5.648178 AGCATGCTATGAAATCACAACAA 57.352 34.783 21.21 0.00 0.00 2.83
4617 4978 6.028146 AGCATGCTATGAAATCACAACAAA 57.972 33.333 21.21 0.00 0.00 2.83
4618 4979 6.457355 AGCATGCTATGAAATCACAACAAAA 58.543 32.000 21.21 0.00 0.00 2.44
4619 4980 6.930164 AGCATGCTATGAAATCACAACAAAAA 59.070 30.769 21.21 0.00 0.00 1.94
4674 5035 9.942850 TTGTAACACAATATTCTCTTCATCTCA 57.057 29.630 0.00 0.00 32.34 3.27
4675 5036 9.942850 TGTAACACAATATTCTCTTCATCTCAA 57.057 29.630 0.00 0.00 0.00 3.02
4684 5045 9.703892 ATATTCTCTTCATCTCAAAATACTCGG 57.296 33.333 0.00 0.00 0.00 4.63
4685 5046 5.352284 TCTCTTCATCTCAAAATACTCGGC 58.648 41.667 0.00 0.00 0.00 5.54
4686 5047 4.112634 TCTTCATCTCAAAATACTCGGCG 58.887 43.478 0.00 0.00 0.00 6.46
4687 5048 3.520290 TCATCTCAAAATACTCGGCGT 57.480 42.857 6.85 0.00 0.00 5.68
4688 5049 4.642445 TCATCTCAAAATACTCGGCGTA 57.358 40.909 6.85 0.00 0.00 4.42
4689 5050 5.196341 TCATCTCAAAATACTCGGCGTAT 57.804 39.130 6.85 0.00 40.51 3.06
4691 5052 6.741109 TCATCTCAAAATACTCGGCGTATTA 58.259 36.000 6.85 0.00 45.65 0.98
4692 5053 6.861572 TCATCTCAAAATACTCGGCGTATTAG 59.138 38.462 6.85 0.00 45.65 1.73
4693 5054 5.526115 TCTCAAAATACTCGGCGTATTAGG 58.474 41.667 6.85 1.34 45.65 2.69
4694 5055 5.068198 TCTCAAAATACTCGGCGTATTAGGT 59.932 40.000 6.85 0.57 45.65 3.08
4695 5056 5.663456 TCAAAATACTCGGCGTATTAGGTT 58.337 37.500 6.85 0.00 45.65 3.50
4696 5057 6.108015 TCAAAATACTCGGCGTATTAGGTTT 58.892 36.000 6.85 0.36 45.65 3.27
4697 5058 6.256321 TCAAAATACTCGGCGTATTAGGTTTC 59.744 38.462 6.85 0.00 45.65 2.78
4698 5059 4.924305 ATACTCGGCGTATTAGGTTTCA 57.076 40.909 6.85 0.00 35.26 2.69
4699 5060 3.814005 ACTCGGCGTATTAGGTTTCAT 57.186 42.857 6.85 0.00 0.00 2.57
4700 5061 4.133013 ACTCGGCGTATTAGGTTTCATT 57.867 40.909 6.85 0.00 0.00 2.57
4701 5062 5.266733 ACTCGGCGTATTAGGTTTCATTA 57.733 39.130 6.85 0.00 0.00 1.90
4702 5063 5.287226 ACTCGGCGTATTAGGTTTCATTAG 58.713 41.667 6.85 0.00 0.00 1.73
4703 5064 4.624015 TCGGCGTATTAGGTTTCATTAGG 58.376 43.478 6.85 0.00 0.00 2.69
4704 5065 4.341806 TCGGCGTATTAGGTTTCATTAGGA 59.658 41.667 6.85 0.00 0.00 2.94
4705 5066 4.446719 CGGCGTATTAGGTTTCATTAGGAC 59.553 45.833 0.00 0.00 0.00 3.85
4706 5067 5.362263 GGCGTATTAGGTTTCATTAGGACA 58.638 41.667 0.00 0.00 0.00 4.02
4707 5068 5.818857 GGCGTATTAGGTTTCATTAGGACAA 59.181 40.000 0.00 0.00 0.00 3.18
4708 5069 6.018180 GGCGTATTAGGTTTCATTAGGACAAG 60.018 42.308 0.00 0.00 0.00 3.16
4709 5070 6.511282 GCGTATTAGGTTTCATTAGGACAAGC 60.511 42.308 0.00 0.00 0.00 4.01
4710 5071 6.537301 CGTATTAGGTTTCATTAGGACAAGCA 59.463 38.462 0.00 0.00 0.00 3.91
4711 5072 7.226720 CGTATTAGGTTTCATTAGGACAAGCAT 59.773 37.037 0.00 0.00 0.00 3.79
4712 5073 7.961326 ATTAGGTTTCATTAGGACAAGCATT 57.039 32.000 0.00 0.00 0.00 3.56
4713 5074 7.775053 TTAGGTTTCATTAGGACAAGCATTT 57.225 32.000 0.00 0.00 0.00 2.32
4714 5075 6.029346 AGGTTTCATTAGGACAAGCATTTG 57.971 37.500 0.00 0.00 40.24 2.32
4715 5076 5.774690 AGGTTTCATTAGGACAAGCATTTGA 59.225 36.000 0.00 0.00 37.73 2.69
4716 5077 5.863935 GGTTTCATTAGGACAAGCATTTGAC 59.136 40.000 0.00 0.00 37.73 3.18
4717 5078 4.944962 TCATTAGGACAAGCATTTGACG 57.055 40.909 0.00 0.00 37.73 4.35
4718 5079 4.574892 TCATTAGGACAAGCATTTGACGA 58.425 39.130 0.00 0.00 37.73 4.20
4719 5080 5.000591 TCATTAGGACAAGCATTTGACGAA 58.999 37.500 0.00 0.00 37.73 3.85
4720 5081 4.742438 TTAGGACAAGCATTTGACGAAC 57.258 40.909 0.00 0.00 37.73 3.95
4721 5082 1.531149 AGGACAAGCATTTGACGAACG 59.469 47.619 0.00 0.00 37.73 3.95
4722 5083 1.263217 GGACAAGCATTTGACGAACGT 59.737 47.619 0.00 0.00 37.73 3.99
4723 5084 2.286772 GGACAAGCATTTGACGAACGTT 60.287 45.455 0.00 0.00 37.73 3.99
4724 5085 3.359654 GACAAGCATTTGACGAACGTTT 58.640 40.909 0.46 0.00 37.73 3.60
4725 5086 4.520078 GACAAGCATTTGACGAACGTTTA 58.480 39.130 0.46 0.00 37.73 2.01
4726 5087 4.276460 ACAAGCATTTGACGAACGTTTAC 58.724 39.130 0.46 0.00 37.73 2.01
4727 5088 4.034742 ACAAGCATTTGACGAACGTTTACT 59.965 37.500 0.46 0.00 37.73 2.24
4728 5089 4.385244 AGCATTTGACGAACGTTTACTC 57.615 40.909 0.46 0.00 0.00 2.59
4729 5090 4.056050 AGCATTTGACGAACGTTTACTCT 58.944 39.130 0.46 0.00 0.00 3.24
4730 5091 5.224888 AGCATTTGACGAACGTTTACTCTA 58.775 37.500 0.46 0.00 0.00 2.43
4731 5092 5.118203 AGCATTTGACGAACGTTTACTCTAC 59.882 40.000 0.46 0.00 0.00 2.59
4732 5093 5.107760 GCATTTGACGAACGTTTACTCTACA 60.108 40.000 0.46 0.00 0.00 2.74
4733 5094 6.562640 GCATTTGACGAACGTTTACTCTACAA 60.563 38.462 0.46 0.59 0.00 2.41
4734 5095 6.884096 TTTGACGAACGTTTACTCTACAAA 57.116 33.333 0.46 6.47 0.00 2.83
4735 5096 7.467557 TTTGACGAACGTTTACTCTACAAAT 57.532 32.000 0.46 0.00 0.00 2.32
4736 5097 8.572828 TTTGACGAACGTTTACTCTACAAATA 57.427 30.769 0.46 0.00 0.00 1.40
4737 5098 8.746922 TTGACGAACGTTTACTCTACAAATAT 57.253 30.769 0.46 0.00 0.00 1.28
4738 5099 9.838975 TTGACGAACGTTTACTCTACAAATATA 57.161 29.630 0.46 0.00 0.00 0.86
4766 5127 7.861176 TTTACGTGACATAAAATTTGAAGCC 57.139 32.000 0.00 0.00 0.00 4.35
4767 5128 5.446143 ACGTGACATAAAATTTGAAGCCA 57.554 34.783 0.00 0.00 0.00 4.75
4768 5129 6.024552 ACGTGACATAAAATTTGAAGCCAT 57.975 33.333 0.00 0.00 0.00 4.40
4769 5130 6.454795 ACGTGACATAAAATTTGAAGCCATT 58.545 32.000 0.00 0.00 0.00 3.16
4770 5131 7.598278 ACGTGACATAAAATTTGAAGCCATTA 58.402 30.769 0.00 0.00 0.00 1.90
4771 5132 7.754924 ACGTGACATAAAATTTGAAGCCATTAG 59.245 33.333 0.00 0.00 0.00 1.73
4772 5133 7.253750 CGTGACATAAAATTTGAAGCCATTAGC 60.254 37.037 0.00 0.00 44.25 3.09
4787 5148 6.941218 GCCATTAGCTTCTTCTTTCAAAAG 57.059 37.500 0.00 0.00 38.99 2.27
4788 5149 6.450545 GCCATTAGCTTCTTCTTTCAAAAGT 58.549 36.000 0.00 0.00 38.99 2.66
4789 5150 7.593825 GCCATTAGCTTCTTCTTTCAAAAGTA 58.406 34.615 0.00 0.00 38.99 2.24
4790 5151 7.539022 GCCATTAGCTTCTTCTTTCAAAAGTAC 59.461 37.037 0.00 0.00 38.99 2.73
4791 5152 8.023706 CCATTAGCTTCTTCTTTCAAAAGTACC 58.976 37.037 0.00 0.00 37.31 3.34
4792 5153 8.787852 CATTAGCTTCTTCTTTCAAAAGTACCT 58.212 33.333 0.00 0.00 37.31 3.08
4795 5156 8.926092 AGCTTCTTCTTTCAAAAGTACCTATT 57.074 30.769 2.63 0.00 37.31 1.73
4796 5157 9.004717 AGCTTCTTCTTTCAAAAGTACCTATTC 57.995 33.333 2.63 0.00 37.31 1.75
4797 5158 7.958025 GCTTCTTCTTTCAAAAGTACCTATTCG 59.042 37.037 2.63 0.00 37.31 3.34
4798 5159 8.897872 TTCTTCTTTCAAAAGTACCTATTCGT 57.102 30.769 2.63 0.00 37.31 3.85
4799 5160 8.306680 TCTTCTTTCAAAAGTACCTATTCGTG 57.693 34.615 2.63 0.00 37.31 4.35
4800 5161 7.386848 TCTTCTTTCAAAAGTACCTATTCGTGG 59.613 37.037 2.63 0.00 37.31 4.94
4801 5162 6.527423 TCTTTCAAAAGTACCTATTCGTGGT 58.473 36.000 2.63 0.00 37.31 4.16
4802 5163 6.993902 TCTTTCAAAAGTACCTATTCGTGGTT 59.006 34.615 2.63 0.00 37.31 3.67
4803 5164 8.149647 TCTTTCAAAAGTACCTATTCGTGGTTA 58.850 33.333 2.63 0.00 37.31 2.85
4804 5165 8.851541 TTTCAAAAGTACCTATTCGTGGTTAT 57.148 30.769 0.00 0.00 38.88 1.89
4805 5166 7.837202 TCAAAAGTACCTATTCGTGGTTATG 57.163 36.000 0.00 0.00 38.88 1.90
4806 5167 7.613585 TCAAAAGTACCTATTCGTGGTTATGA 58.386 34.615 0.00 0.00 38.88 2.15
4807 5168 8.262227 TCAAAAGTACCTATTCGTGGTTATGAT 58.738 33.333 0.00 0.00 38.88 2.45
4808 5169 8.335356 CAAAAGTACCTATTCGTGGTTATGATG 58.665 37.037 0.00 0.00 38.88 3.07
4809 5170 6.726490 AGTACCTATTCGTGGTTATGATGT 57.274 37.500 0.00 0.00 38.88 3.06
4810 5171 7.120923 AGTACCTATTCGTGGTTATGATGTT 57.879 36.000 0.00 0.00 38.88 2.71
4811 5172 8.241497 AGTACCTATTCGTGGTTATGATGTTA 57.759 34.615 0.00 0.00 38.88 2.41
4812 5173 8.867097 AGTACCTATTCGTGGTTATGATGTTAT 58.133 33.333 0.00 0.00 38.88 1.89
4815 5176 9.871238 ACCTATTCGTGGTTATGATGTTATATC 57.129 33.333 0.00 0.00 33.34 1.63
4816 5177 9.869757 CCTATTCGTGGTTATGATGTTATATCA 57.130 33.333 0.00 0.00 0.00 2.15
4855 5216 8.918202 TTGATAGTCTAATTGTTGGTCAAAGT 57.082 30.769 0.00 0.00 39.62 2.66
4856 5217 8.322906 TGATAGTCTAATTGTTGGTCAAAGTG 57.677 34.615 0.00 0.00 39.62 3.16
4857 5218 7.936847 TGATAGTCTAATTGTTGGTCAAAGTGT 59.063 33.333 0.00 0.00 39.62 3.55
4858 5219 8.691661 ATAGTCTAATTGTTGGTCAAAGTGTT 57.308 30.769 0.00 0.00 39.62 3.32
4859 5220 6.795399 AGTCTAATTGTTGGTCAAAGTGTTG 58.205 36.000 0.00 0.00 39.62 3.33
4860 5221 5.458779 GTCTAATTGTTGGTCAAAGTGTTGC 59.541 40.000 0.00 0.00 39.62 4.17
4861 5222 2.663826 TTGTTGGTCAAAGTGTTGCC 57.336 45.000 0.00 0.00 34.50 4.52
4862 5223 0.820871 TGTTGGTCAAAGTGTTGCCC 59.179 50.000 0.00 0.00 33.14 5.36
4863 5224 1.111277 GTTGGTCAAAGTGTTGCCCT 58.889 50.000 0.00 0.00 33.72 5.19
4864 5225 2.303175 GTTGGTCAAAGTGTTGCCCTA 58.697 47.619 0.00 0.00 33.72 3.53
4865 5226 2.691011 GTTGGTCAAAGTGTTGCCCTAA 59.309 45.455 0.00 0.00 33.72 2.69
4866 5227 2.303175 TGGTCAAAGTGTTGCCCTAAC 58.697 47.619 0.00 0.00 33.72 2.34
4867 5228 2.303175 GGTCAAAGTGTTGCCCTAACA 58.697 47.619 0.00 0.00 46.62 2.41
4912 5273 7.727578 TGTGAAACAGAGGGAGTATATACAA 57.272 36.000 15.18 0.00 45.67 2.41
4913 5274 8.319057 TGTGAAACAGAGGGAGTATATACAAT 57.681 34.615 15.18 0.00 45.67 2.71
4914 5275 8.204160 TGTGAAACAGAGGGAGTATATACAATG 58.796 37.037 15.18 6.56 45.67 2.82
4915 5276 7.171678 GTGAAACAGAGGGAGTATATACAATGC 59.828 40.741 15.18 0.70 36.32 3.56
4916 5277 6.747414 AACAGAGGGAGTATATACAATGCA 57.253 37.500 15.18 0.00 0.00 3.96
4917 5278 6.747414 ACAGAGGGAGTATATACAATGCAA 57.253 37.500 15.18 0.00 0.00 4.08
4918 5279 7.136822 ACAGAGGGAGTATATACAATGCAAA 57.863 36.000 15.18 0.00 0.00 3.68
4919 5280 7.749666 ACAGAGGGAGTATATACAATGCAAAT 58.250 34.615 15.18 0.00 0.00 2.32
4920 5281 8.220559 ACAGAGGGAGTATATACAATGCAAATT 58.779 33.333 15.18 0.00 0.00 1.82
4921 5282 9.071276 CAGAGGGAGTATATACAATGCAAATTT 57.929 33.333 15.18 0.00 0.00 1.82
4922 5283 9.646522 AGAGGGAGTATATACAATGCAAATTTT 57.353 29.630 15.18 0.00 0.00 1.82
4933 5294 9.933723 ATACAATGCAAATTTTAGAAGCTTTCT 57.066 25.926 0.00 1.90 43.72 2.52
4934 5295 8.667076 ACAATGCAAATTTTAGAAGCTTTCTT 57.333 26.923 0.00 0.00 41.14 2.52
4935 5296 9.762933 ACAATGCAAATTTTAGAAGCTTTCTTA 57.237 25.926 0.00 0.00 41.14 2.10
4946 5307 9.463443 TTTAGAAGCTTTCTTATTTTGCAAGAC 57.537 29.630 0.00 0.00 41.14 3.01
4947 5308 6.145535 AGAAGCTTTCTTATTTTGCAAGACG 58.854 36.000 0.00 0.00 36.36 4.18
4948 5309 5.689383 AGCTTTCTTATTTTGCAAGACGA 57.311 34.783 0.00 0.00 31.86 4.20
4949 5310 5.452777 AGCTTTCTTATTTTGCAAGACGAC 58.547 37.500 0.00 0.00 31.86 4.34
4950 5311 5.008613 AGCTTTCTTATTTTGCAAGACGACA 59.991 36.000 0.00 0.00 31.86 4.35
4951 5312 5.685511 GCTTTCTTATTTTGCAAGACGACAA 59.314 36.000 0.00 0.00 31.86 3.18
4952 5313 6.345015 GCTTTCTTATTTTGCAAGACGACAAC 60.345 38.462 0.00 0.00 31.86 3.32
4953 5314 5.743026 TCTTATTTTGCAAGACGACAACA 57.257 34.783 0.00 0.00 0.00 3.33
4954 5315 6.125327 TCTTATTTTGCAAGACGACAACAA 57.875 33.333 0.00 0.00 0.00 2.83
4955 5316 6.556212 TCTTATTTTGCAAGACGACAACAAA 58.444 32.000 0.00 0.00 0.00 2.83
4956 5317 7.199766 TCTTATTTTGCAAGACGACAACAAAT 58.800 30.769 0.00 0.00 30.95 2.32
4957 5318 8.346300 TCTTATTTTGCAAGACGACAACAAATA 58.654 29.630 0.00 0.00 30.95 1.40
4958 5319 9.128107 CTTATTTTGCAAGACGACAACAAATAT 57.872 29.630 0.00 0.00 30.95 1.28
4959 5320 7.945033 ATTTTGCAAGACGACAACAAATATT 57.055 28.000 0.00 0.00 30.95 1.28
4960 5321 7.763172 TTTTGCAAGACGACAACAAATATTT 57.237 28.000 0.00 0.00 30.95 1.40
4961 5322 6.984740 TTGCAAGACGACAACAAATATTTC 57.015 33.333 0.00 0.00 0.00 2.17
4962 5323 6.066054 TGCAAGACGACAACAAATATTTCA 57.934 33.333 0.00 0.00 0.00 2.69
4963 5324 6.142139 TGCAAGACGACAACAAATATTTCAG 58.858 36.000 0.00 0.00 0.00 3.02
4964 5325 5.569059 GCAAGACGACAACAAATATTTCAGG 59.431 40.000 0.00 0.00 0.00 3.86
4965 5326 6.567701 GCAAGACGACAACAAATATTTCAGGA 60.568 38.462 0.00 0.00 0.00 3.86
4966 5327 6.727824 AGACGACAACAAATATTTCAGGAG 57.272 37.500 0.00 0.00 0.00 3.69
4967 5328 6.464222 AGACGACAACAAATATTTCAGGAGA 58.536 36.000 0.00 0.00 0.00 3.71
4968 5329 7.106239 AGACGACAACAAATATTTCAGGAGAT 58.894 34.615 0.00 0.00 0.00 2.75
4969 5330 7.607991 AGACGACAACAAATATTTCAGGAGATT 59.392 33.333 0.00 0.00 0.00 2.40
4970 5331 7.530010 ACGACAACAAATATTTCAGGAGATTG 58.470 34.615 0.00 0.00 0.00 2.67
4971 5332 6.470235 CGACAACAAATATTTCAGGAGATTGC 59.530 38.462 0.00 0.00 0.00 3.56
4972 5333 7.230849 ACAACAAATATTTCAGGAGATTGCA 57.769 32.000 0.00 0.00 0.00 4.08
4973 5334 7.669427 ACAACAAATATTTCAGGAGATTGCAA 58.331 30.769 0.00 0.00 0.00 4.08
4974 5335 8.316214 ACAACAAATATTTCAGGAGATTGCAAT 58.684 29.630 12.83 12.83 0.00 3.56
4975 5336 9.806203 CAACAAATATTTCAGGAGATTGCAATA 57.194 29.630 12.97 0.00 0.00 1.90
4976 5337 9.807649 AACAAATATTTCAGGAGATTGCAATAC 57.192 29.630 12.97 9.57 0.00 1.89
4977 5338 8.970020 ACAAATATTTCAGGAGATTGCAATACA 58.030 29.630 12.97 0.00 0.00 2.29
4978 5339 9.806203 CAAATATTTCAGGAGATTGCAATACAA 57.194 29.630 12.97 1.18 44.01 2.41
5007 5368 8.902540 TTTTGTACTACTGAATCACATTGTCT 57.097 30.769 0.00 0.00 0.00 3.41
5008 5369 7.889589 TTGTACTACTGAATCACATTGTCTG 57.110 36.000 0.00 0.00 0.00 3.51
5009 5370 7.227049 TGTACTACTGAATCACATTGTCTGA 57.773 36.000 0.00 0.00 0.00 3.27
5010 5371 7.315890 TGTACTACTGAATCACATTGTCTGAG 58.684 38.462 0.00 0.00 0.00 3.35
5011 5372 5.728471 ACTACTGAATCACATTGTCTGAGG 58.272 41.667 0.00 0.00 0.00 3.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
13 14 9.985730 AACATTTTTCAAGTACATGATCAACAT 57.014 25.926 0.00 0.00 40.17 2.71
14 15 9.462174 GAACATTTTTCAAGTACATGATCAACA 57.538 29.630 0.00 0.00 0.00 3.33
15 16 8.629986 CGAACATTTTTCAAGTACATGATCAAC 58.370 33.333 0.00 0.00 0.00 3.18
16 17 8.563732 TCGAACATTTTTCAAGTACATGATCAA 58.436 29.630 0.00 0.00 0.00 2.57
17 18 8.093659 TCGAACATTTTTCAAGTACATGATCA 57.906 30.769 0.00 0.00 0.00 2.92
96 97 9.466497 ACACATTGAAATACACAATAGGAATCT 57.534 29.630 0.00 0.00 36.40 2.40
99 100 9.072375 TGAACACATTGAAATACACAATAGGAA 57.928 29.630 0.00 0.00 36.40 3.36
100 101 8.628630 TGAACACATTGAAATACACAATAGGA 57.371 30.769 0.00 0.00 36.40 2.94
101 102 9.507280 GATGAACACATTGAAATACACAATAGG 57.493 33.333 0.00 0.00 36.40 2.57
153 154 5.053811 TGCACGATGAACTGTCTCTAAAAA 58.946 37.500 0.00 0.00 0.00 1.94
163 164 7.565450 TTATTTTCAAATGCACGATGAACTG 57.435 32.000 9.45 0.00 33.13 3.16
164 165 8.028354 TGATTATTTTCAAATGCACGATGAACT 58.972 29.630 9.45 4.61 33.13 3.01
168 169 6.019640 GGGTGATTATTTTCAAATGCACGATG 60.020 38.462 0.00 0.00 32.25 3.84
169 170 6.042143 GGGTGATTATTTTCAAATGCACGAT 58.958 36.000 0.00 0.00 32.25 3.73
180 181 7.868922 ACTTTTTGTTACGGGGTGATTATTTTC 59.131 33.333 0.00 0.00 0.00 2.29
195 196 6.531948 TGCACACCAAACATACTTTTTGTTAC 59.468 34.615 0.00 0.00 36.32 2.50
200 201 5.296748 GGATGCACACCAAACATACTTTTT 58.703 37.500 6.86 0.00 0.00 1.94
204 205 2.083774 CGGATGCACACCAAACATACT 58.916 47.619 11.50 0.00 0.00 2.12
211 212 1.811965 CATCTTTCGGATGCACACCAA 59.188 47.619 11.50 3.54 44.21 3.67
222 223 8.716619 TTAAATAAACAACGAACATCTTTCGG 57.283 30.769 10.83 0.00 45.34 4.30
249 251 9.082313 AGACATTTCCAAAATACAAGATGAACT 57.918 29.630 0.00 0.00 0.00 3.01
257 259 7.081349 CGCACTAAGACATTTCCAAAATACAA 58.919 34.615 0.00 0.00 0.00 2.41
265 267 1.339631 CCCCGCACTAAGACATTTCCA 60.340 52.381 0.00 0.00 0.00 3.53
266 268 1.065709 TCCCCGCACTAAGACATTTCC 60.066 52.381 0.00 0.00 0.00 3.13
272 274 3.538634 ATAAGTTCCCCGCACTAAGAC 57.461 47.619 0.00 0.00 0.00 3.01
280 282 2.484264 GCATCACATATAAGTTCCCCGC 59.516 50.000 0.00 0.00 0.00 6.13
291 293 5.702670 ACTAAGCGCAATAAGCATCACATAT 59.297 36.000 11.47 0.00 46.13 1.78
292 294 5.050159 CACTAAGCGCAATAAGCATCACATA 60.050 40.000 11.47 0.00 46.13 2.29
299 301 2.006888 GGTCACTAAGCGCAATAAGCA 58.993 47.619 11.47 0.00 46.13 3.91
305 307 2.349755 GGGGGTCACTAAGCGCAA 59.650 61.111 11.47 0.00 39.90 4.85
309 311 0.745468 CTAGTCGGGGGTCACTAAGC 59.255 60.000 0.00 0.00 0.00 3.09
310 312 1.400737 CCTAGTCGGGGGTCACTAAG 58.599 60.000 0.00 0.00 0.00 2.18
311 313 0.685458 GCCTAGTCGGGGGTCACTAA 60.685 60.000 0.00 0.00 0.00 2.24
312 314 1.076485 GCCTAGTCGGGGGTCACTA 60.076 63.158 0.00 0.00 0.00 2.74
314 316 3.468140 GGCCTAGTCGGGGGTCAC 61.468 72.222 0.00 0.00 0.00 3.67
322 324 3.861797 AATGGGCCGGCCTAGTCG 61.862 66.667 42.70 0.00 36.10 4.18
323 325 2.203209 CAATGGGCCGGCCTAGTC 60.203 66.667 42.70 27.49 36.10 2.59
324 326 2.690881 TCAATGGGCCGGCCTAGT 60.691 61.111 42.70 35.61 36.10 2.57
325 327 2.203209 GTCAATGGGCCGGCCTAG 60.203 66.667 42.70 27.16 36.10 3.02
337 360 1.347707 TCCCTTGAGTTCTGCGTCAAT 59.652 47.619 0.00 0.00 32.33 2.57
341 364 0.318762 GAGTCCCTTGAGTTCTGCGT 59.681 55.000 0.00 0.00 0.00 5.24
349 372 6.830873 AAAATTCATTCAGAGTCCCTTGAG 57.169 37.500 0.00 0.00 0.00 3.02
399 422 8.755028 ACTTGAAAGCTAAAAACCCTAGAAAAA 58.245 29.630 0.00 0.00 0.00 1.94
403 426 5.699458 CGACTTGAAAGCTAAAAACCCTAGA 59.301 40.000 0.00 0.00 0.00 2.43
404 427 5.469084 ACGACTTGAAAGCTAAAAACCCTAG 59.531 40.000 0.00 0.00 0.00 3.02
405 428 5.370679 ACGACTTGAAAGCTAAAAACCCTA 58.629 37.500 0.00 0.00 0.00 3.53
406 429 4.204799 ACGACTTGAAAGCTAAAAACCCT 58.795 39.130 0.00 0.00 0.00 4.34
407 430 4.563337 ACGACTTGAAAGCTAAAAACCC 57.437 40.909 0.00 0.00 0.00 4.11
487 511 5.751028 GCACTTTTCTCATAGAGCGTTCTAT 59.249 40.000 15.27 15.27 45.44 1.98
488 512 5.103000 GCACTTTTCTCATAGAGCGTTCTA 58.897 41.667 11.62 11.62 40.10 2.10
493 517 4.891516 GAAAGCACTTTTCTCATAGAGCG 58.108 43.478 0.00 0.00 41.61 5.03
625 652 9.956720 ATTTCTAAAGATATTCGCAGAATTTGG 57.043 29.630 8.65 2.29 45.90 3.28
774 803 3.513662 CGGTTGGTTTTTCGTTTCCTTT 58.486 40.909 0.00 0.00 0.00 3.11
777 806 1.842720 CCGGTTGGTTTTTCGTTTCC 58.157 50.000 0.00 0.00 0.00 3.13
790 819 4.575645 TCCTGTTGTTTACTTTACCGGTTG 59.424 41.667 15.04 6.38 0.00 3.77
800 829 7.158697 ACAAAAAGCTTTTCCTGTTGTTTACT 58.841 30.769 24.04 1.62 0.00 2.24
801 830 7.359262 ACAAAAAGCTTTTCCTGTTGTTTAC 57.641 32.000 24.04 0.00 0.00 2.01
802 831 7.971183 AACAAAAAGCTTTTCCTGTTGTTTA 57.029 28.000 28.56 0.00 33.54 2.01
804 833 6.875948 AAACAAAAAGCTTTTCCTGTTGTT 57.124 29.167 29.29 26.50 36.35 2.83
806 835 6.896969 TGAAAACAAAAAGCTTTTCCTGTTG 58.103 32.000 29.29 22.99 36.10 3.33
809 838 8.075574 AGTTTTGAAAACAAAAAGCTTTTCCTG 58.924 29.630 24.04 20.62 36.10 3.86
863 924 1.966451 CCTGGACGTTCACCTTGGC 60.966 63.158 0.00 0.00 0.00 4.52
1008 1072 0.856982 GAGGGAGAGGGGAGAGATGA 59.143 60.000 0.00 0.00 0.00 2.92
1025 1089 3.702792 TGTACCTGAGGGAAAGAGAGAG 58.297 50.000 2.38 0.00 36.25 3.20
1026 1090 3.827817 TGTACCTGAGGGAAAGAGAGA 57.172 47.619 2.38 0.00 36.25 3.10
1027 1091 4.467795 TGAATGTACCTGAGGGAAAGAGAG 59.532 45.833 2.38 0.00 36.25 3.20
1028 1092 4.425772 TGAATGTACCTGAGGGAAAGAGA 58.574 43.478 2.38 0.00 36.25 3.10
1169 1267 2.897326 TGTGATCCCTCGTCTCAGAAAA 59.103 45.455 0.00 0.00 0.00 2.29
1183 1281 2.690778 GCCAGCCGTGTTGTGATCC 61.691 63.158 0.00 0.00 0.00 3.36
1276 1379 1.005037 CAGGTAGTCCTTGTGCGCA 60.005 57.895 5.66 5.66 43.07 6.09
1462 1565 3.930012 CGGATCTTCGGGAGGGGC 61.930 72.222 0.00 0.00 0.00 5.80
1675 1782 2.919856 ACCGAGCAGGCACTCAGT 60.920 61.111 8.09 0.26 46.52 3.41
1703 1810 0.259065 TACCTCAGATGAGTCGGCCT 59.741 55.000 0.00 0.00 40.48 5.19
1709 1816 2.106566 CTGCAGGTACCTCAGATGAGT 58.893 52.381 25.37 0.00 40.48 3.41
1781 1888 2.283529 GGCAGTCCAGGACGAAGGA 61.284 63.158 14.32 0.00 37.67 3.36
1792 1899 1.068434 GCTCTCAGTATCAGGCAGTCC 59.932 57.143 0.00 0.00 0.00 3.85
1807 1914 0.528684 CGAAATCCGGGACAGCTCTC 60.529 60.000 0.00 0.00 33.91 3.20
2092 2207 2.893637 ACATCGCCTTGTATCTGACAC 58.106 47.619 0.00 0.00 37.96 3.67
2191 2306 3.692101 TGAAAAACGTCATGTTGGACTGT 59.308 39.130 0.00 0.00 40.84 3.55
2207 2322 4.956085 TCAATGTCCTCGAGAGTGAAAAA 58.044 39.130 15.71 0.00 27.75 1.94
2218 2333 1.871676 CATGGCAGATCAATGTCCTCG 59.128 52.381 0.00 0.00 0.00 4.63
2308 2423 2.237392 ACTGTATCAGTTCAAGGGAGCC 59.763 50.000 0.00 0.00 42.59 4.70
2353 2471 4.016444 ACCTGGTACATGAATTCGCAAAT 58.984 39.130 0.00 0.00 38.20 2.32
2354 2472 3.190327 CACCTGGTACATGAATTCGCAAA 59.810 43.478 0.00 0.00 38.20 3.68
2363 2481 3.901222 TGAGAAGAACACCTGGTACATGA 59.099 43.478 0.00 0.00 38.20 3.07
2368 2486 4.039245 CACTTCTGAGAAGAACACCTGGTA 59.961 45.833 27.49 0.00 0.00 3.25
2370 2488 3.397482 CACTTCTGAGAAGAACACCTGG 58.603 50.000 27.49 0.00 0.00 4.45
2442 2560 1.270907 AGAACTCATCTGCGTTCCCT 58.729 50.000 8.92 0.00 39.76 4.20
2512 2630 0.865769 GTTTCACCGTGCGATTCACT 59.134 50.000 0.00 0.00 43.46 3.41
2549 2667 1.270839 TGTTAGTGCTTGGCTCCTGAC 60.271 52.381 0.00 0.00 0.00 3.51
2551 2669 1.160137 GTGTTAGTGCTTGGCTCCTG 58.840 55.000 0.00 0.00 0.00 3.86
2553 2671 1.160137 CTGTGTTAGTGCTTGGCTCC 58.840 55.000 0.00 0.00 0.00 4.70
2561 2679 0.600255 ACCGTGCTCTGTGTTAGTGC 60.600 55.000 0.00 0.00 44.22 4.40
2578 2696 4.683781 GCTATCTGATGATCGAGTTTCACC 59.316 45.833 0.00 0.00 34.32 4.02
2650 2768 0.110823 CCGTTACTTGCGTTGTCTGC 60.111 55.000 0.00 0.00 0.00 4.26
2655 2773 1.862201 TCTGAACCGTTACTTGCGTTG 59.138 47.619 0.00 0.00 0.00 4.10
2657 2775 2.066262 CATCTGAACCGTTACTTGCGT 58.934 47.619 0.00 0.00 0.00 5.24
2697 2815 1.179152 TAAACTCGGCCTCATCGTCA 58.821 50.000 0.00 0.00 0.00 4.35
2815 2957 6.690194 ATCTGTTGCCATCTCTTCATTTAC 57.310 37.500 0.00 0.00 0.00 2.01
2910 3052 1.213537 CTGCCTGGTTTTCCGCATG 59.786 57.895 0.00 0.00 44.36 4.06
2940 3082 3.205056 TGATGGGAACTGCTGGGATAATT 59.795 43.478 0.00 0.00 0.00 1.40
2943 3085 1.891933 TGATGGGAACTGCTGGGATA 58.108 50.000 0.00 0.00 0.00 2.59
2973 3115 0.827925 TGTCTGCTGGTCTCCTCGTT 60.828 55.000 0.00 0.00 0.00 3.85
2975 3117 1.214062 GTGTCTGCTGGTCTCCTCG 59.786 63.158 0.00 0.00 0.00 4.63
2984 3126 2.236223 ATCTGCTCCGGTGTCTGCTG 62.236 60.000 0.00 4.26 0.00 4.41
2985 3127 1.986757 ATCTGCTCCGGTGTCTGCT 60.987 57.895 0.00 0.00 0.00 4.24
2986 3128 1.812922 CATCTGCTCCGGTGTCTGC 60.813 63.158 0.00 0.12 0.00 4.26
3033 3175 1.390565 TCTGCGAGCCTACTCTAACC 58.609 55.000 0.00 0.00 41.09 2.85
3074 3216 8.757982 AGATGTGCTGTTATTGGAAGAATTAT 57.242 30.769 0.00 0.00 0.00 1.28
3077 3219 6.182627 TGAGATGTGCTGTTATTGGAAGAAT 58.817 36.000 0.00 0.00 0.00 2.40
3086 3228 6.656270 TGTCTTTGATTGAGATGTGCTGTTAT 59.344 34.615 0.00 0.00 0.00 1.89
3103 3245 2.972021 TGTGAGATGGACCTGTCTTTGA 59.028 45.455 0.00 0.00 0.00 2.69
3107 3249 2.705658 TGTTTGTGAGATGGACCTGTCT 59.294 45.455 0.00 0.00 0.00 3.41
3112 3254 3.820467 TCATGTTGTTTGTGAGATGGACC 59.180 43.478 0.00 0.00 0.00 4.46
3182 3327 6.531594 GTGTTCTTTGGAAAGGTTTGAAGAAG 59.468 38.462 0.00 0.00 34.80 2.85
3246 3391 0.954452 GTTTGACCTCTGGCCTTGTG 59.046 55.000 3.32 0.00 0.00 3.33
3247 3392 0.550914 TGTTTGACCTCTGGCCTTGT 59.449 50.000 3.32 0.00 0.00 3.16
3249 3394 2.452600 TTTGTTTGACCTCTGGCCTT 57.547 45.000 3.32 0.00 0.00 4.35
3276 3454 2.514824 GGAGATGCTTGCCGGGTC 60.515 66.667 2.18 0.00 0.00 4.46
3292 3470 0.890683 GGACTTGGTGCAAAGGATGG 59.109 55.000 3.31 0.00 0.00 3.51
3294 3472 1.707427 AGAGGACTTGGTGCAAAGGAT 59.293 47.619 3.31 0.00 0.00 3.24
3297 3475 2.704572 CCTAGAGGACTTGGTGCAAAG 58.295 52.381 0.00 0.00 37.39 2.77
3300 3478 1.553690 GGCCTAGAGGACTTGGTGCA 61.554 60.000 0.00 0.00 41.12 4.57
3355 3533 2.092212 TCTTGGCTTTCTCCATGGGATC 60.092 50.000 13.02 1.35 35.77 3.36
3381 3559 2.762535 TTTCAGAGGAATGGACGACC 57.237 50.000 0.00 0.00 31.93 4.79
3385 3563 5.619625 CTCAGTTTTTCAGAGGAATGGAC 57.380 43.478 0.00 0.00 31.93 4.02
3404 3582 0.255033 TGGCGCTCTACTACTCCTCA 59.745 55.000 7.64 0.00 0.00 3.86
3441 3619 2.439701 CGACGAGGGGCCTCTACA 60.440 66.667 4.16 0.00 40.69 2.74
3447 3625 2.434359 CTTGTTCGACGAGGGGCC 60.434 66.667 0.00 0.00 0.00 5.80
3505 3686 4.699522 AGAAGGAACGGCCGGTGC 62.700 66.667 29.17 29.17 43.43 5.01
3517 3698 0.919710 ATCTTTCCCGGGGAAGAAGG 59.080 55.000 41.57 20.34 43.06 3.46
3543 3724 2.050350 CCCAGGGAGCGAAGTCGTA 61.050 63.158 0.00 0.00 42.22 3.43
3591 3772 3.429547 GCGAGGAAGAAGAAGCTATGTGA 60.430 47.826 0.00 0.00 0.00 3.58
3741 3925 4.752879 GCACGGCGAGGCAACCTA 62.753 66.667 16.62 0.00 31.76 3.08
3793 3977 0.179094 TGTACATCGCCCGCTTTAGG 60.179 55.000 0.00 0.00 0.00 2.69
3797 3981 2.106683 GCTTGTACATCGCCCGCTT 61.107 57.895 0.00 0.00 0.00 4.68
3813 3997 0.467384 ATGCTCTTGGCGATACAGCT 59.533 50.000 0.00 0.00 45.43 4.24
3843 4027 1.424493 CGCCTTCTCGATGGTTCTGC 61.424 60.000 0.00 0.00 0.00 4.26
3866 4050 1.602888 AAGCTTCTGCCACTGCCTG 60.603 57.895 0.00 0.00 40.80 4.85
3957 4141 4.035675 GTGGTTCCACTTCTTCTGTCTTTG 59.964 45.833 13.97 0.00 34.42 2.77
3965 4149 1.226746 CCGTGTGGTTCCACTTCTTC 58.773 55.000 20.48 7.31 37.78 2.87
4089 4273 1.758280 CGGGCCCACAAGTGTAGTATA 59.242 52.381 24.92 0.00 0.00 1.47
4096 4280 4.641645 TCTGCGGGCCCACAAGTG 62.642 66.667 24.92 6.92 0.00 3.16
4108 4320 3.607422 TTCAACATTCAACAGTCTGCG 57.393 42.857 0.00 0.00 0.00 5.18
4115 4327 8.545229 AGTTGTTTCAAATTCAACATTCAACA 57.455 26.923 8.99 0.00 42.33 3.33
4162 4374 7.338710 AGCCAATTCATAAGCAGTAGTTTAGA 58.661 34.615 0.00 0.00 0.00 2.10
4163 4375 7.559590 AGCCAATTCATAAGCAGTAGTTTAG 57.440 36.000 0.00 0.00 0.00 1.85
4174 4386 6.867816 TGCTAACAAACAAGCCAATTCATAAG 59.132 34.615 0.00 0.00 37.97 1.73
4178 4390 4.662468 TGCTAACAAACAAGCCAATTCA 57.338 36.364 0.00 0.00 37.97 2.57
4255 4616 1.333619 TGTTGCAAGTCGGAAGAAAGC 59.666 47.619 0.00 0.00 45.01 3.51
4300 4661 1.656441 CTGTTGCAAGCCAGGACAC 59.344 57.895 0.00 0.00 0.00 3.67
4425 4786 6.040616 CGACTACCATAGTTGTAAGGAATCCT 59.959 42.308 0.00 0.00 39.59 3.24
4431 4792 3.714391 GCCGACTACCATAGTTGTAAGG 58.286 50.000 3.19 0.00 39.59 2.69
4437 4798 1.041447 AGGCGCCGACTACCATAGTT 61.041 55.000 23.20 0.00 39.59 2.24
4443 4804 0.520847 GATACTAGGCGCCGACTACC 59.479 60.000 23.20 6.97 0.00 3.18
4449 4810 1.154263 GCTACGATACTAGGCGCCG 60.154 63.158 23.20 10.77 0.00 6.46
4455 4816 4.259690 GCGGTTTTGTTGCTACGATACTAG 60.260 45.833 8.50 0.00 0.00 2.57
4456 4817 3.613737 GCGGTTTTGTTGCTACGATACTA 59.386 43.478 8.50 0.00 0.00 1.82
4457 4818 2.414138 GCGGTTTTGTTGCTACGATACT 59.586 45.455 8.50 0.00 0.00 2.12
4458 4819 2.414138 AGCGGTTTTGTTGCTACGATAC 59.586 45.455 0.00 1.49 37.15 2.24
4459 4820 2.690786 AGCGGTTTTGTTGCTACGATA 58.309 42.857 0.00 0.00 37.15 2.92
4460 4821 1.519408 AGCGGTTTTGTTGCTACGAT 58.481 45.000 0.00 0.00 37.15 3.73
4461 4822 2.063266 CTAGCGGTTTTGTTGCTACGA 58.937 47.619 0.00 0.00 40.06 3.43
4462 4823 1.127951 CCTAGCGGTTTTGTTGCTACG 59.872 52.381 0.00 0.00 40.06 3.51
4463 4824 2.148768 ACCTAGCGGTTTTGTTGCTAC 58.851 47.619 0.00 0.00 42.13 3.58
4464 4825 2.554370 ACCTAGCGGTTTTGTTGCTA 57.446 45.000 0.00 0.00 42.13 3.49
4465 4826 3.414486 ACCTAGCGGTTTTGTTGCT 57.586 47.368 0.00 0.00 42.13 3.91
4481 4842 2.092323 CAACTAAGGGCTAGGCAAACC 58.908 52.381 19.14 0.00 31.14 3.27
4482 4843 1.472878 GCAACTAAGGGCTAGGCAAAC 59.527 52.381 19.14 0.35 31.14 2.93
4483 4844 1.074727 TGCAACTAAGGGCTAGGCAAA 59.925 47.619 19.14 1.45 31.14 3.68
4484 4845 0.695924 TGCAACTAAGGGCTAGGCAA 59.304 50.000 19.14 1.83 31.14 4.52
4485 4846 0.035439 GTGCAACTAAGGGCTAGGCA 60.035 55.000 19.14 0.00 31.14 4.75
4486 4847 1.090052 CGTGCAACTAAGGGCTAGGC 61.090 60.000 8.00 8.00 31.75 3.93
4487 4848 0.462047 CCGTGCAACTAAGGGCTAGG 60.462 60.000 0.00 0.00 31.75 3.02
4488 4849 1.090052 GCCGTGCAACTAAGGGCTAG 61.090 60.000 0.00 0.00 43.63 3.42
4489 4850 1.078708 GCCGTGCAACTAAGGGCTA 60.079 57.895 0.00 0.00 43.63 3.93
4490 4851 2.359975 GCCGTGCAACTAAGGGCT 60.360 61.111 0.00 0.00 43.63 5.19
4491 4852 2.359975 AGCCGTGCAACTAAGGGC 60.360 61.111 0.00 0.00 46.58 5.19
4492 4853 3.578456 CAGCCGTGCAACTAAGGG 58.422 61.111 0.00 0.00 31.75 3.95
4504 4865 4.374702 GTCAGCAACACGCAGCCG 62.375 66.667 0.00 0.00 46.13 5.52
4505 4866 2.063541 AAAGTCAGCAACACGCAGCC 62.064 55.000 0.00 0.00 46.13 4.85
4506 4867 0.931662 CAAAGTCAGCAACACGCAGC 60.932 55.000 0.00 0.00 46.13 5.25
4507 4868 0.657312 TCAAAGTCAGCAACACGCAG 59.343 50.000 0.00 0.00 46.13 5.18
4508 4869 0.376852 GTCAAAGTCAGCAACACGCA 59.623 50.000 0.00 0.00 46.13 5.24
4509 4870 0.654472 CGTCAAAGTCAGCAACACGC 60.654 55.000 0.00 0.00 42.91 5.34
4510 4871 0.650512 ACGTCAAAGTCAGCAACACG 59.349 50.000 0.00 0.00 31.81 4.49
4511 4872 2.864343 AGTACGTCAAAGTCAGCAACAC 59.136 45.455 0.00 0.00 0.00 3.32
4512 4873 3.173668 AGTACGTCAAAGTCAGCAACA 57.826 42.857 0.00 0.00 0.00 3.33
4513 4874 4.515432 GAAAGTACGTCAAAGTCAGCAAC 58.485 43.478 0.00 0.00 0.00 4.17
4514 4875 3.244345 CGAAAGTACGTCAAAGTCAGCAA 59.756 43.478 0.00 0.00 0.00 3.91
4515 4876 2.792674 CGAAAGTACGTCAAAGTCAGCA 59.207 45.455 0.00 0.00 0.00 4.41
4516 4877 2.409879 GCGAAAGTACGTCAAAGTCAGC 60.410 50.000 0.00 0.00 35.59 4.26
4517 4878 2.792674 TGCGAAAGTACGTCAAAGTCAG 59.207 45.455 0.00 0.00 35.59 3.51
4518 4879 2.811855 TGCGAAAGTACGTCAAAGTCA 58.188 42.857 0.00 0.00 35.59 3.41
4519 4880 3.847037 TTGCGAAAGTACGTCAAAGTC 57.153 42.857 0.00 0.00 35.59 3.01
4520 4881 6.476243 AATATTGCGAAAGTACGTCAAAGT 57.524 33.333 0.00 0.00 34.92 2.66
4521 4882 9.485591 AAATAATATTGCGAAAGTACGTCAAAG 57.514 29.630 0.00 0.00 34.92 2.77
4522 4883 9.828852 AAAATAATATTGCGAAAGTACGTCAAA 57.171 25.926 0.00 0.00 34.92 2.69
4523 4884 9.268255 CAAAATAATATTGCGAAAGTACGTCAA 57.732 29.630 0.00 0.00 35.37 3.18
4524 4885 7.427030 GCAAAATAATATTGCGAAAGTACGTCA 59.573 33.333 0.00 0.00 43.14 4.35
4525 4886 7.751813 GCAAAATAATATTGCGAAAGTACGTC 58.248 34.615 0.00 0.00 43.14 4.34
4526 4887 7.659290 GCAAAATAATATTGCGAAAGTACGT 57.341 32.000 0.00 0.00 43.14 3.57
4566 4927 9.909043 GTTGCGTAGTTGTTTTTCATTTTTATT 57.091 25.926 0.00 0.00 0.00 1.40
4567 4928 9.088512 TGTTGCGTAGTTGTTTTTCATTTTTAT 57.911 25.926 0.00 0.00 0.00 1.40
4568 4929 8.462143 TGTTGCGTAGTTGTTTTTCATTTTTA 57.538 26.923 0.00 0.00 0.00 1.52
4569 4930 7.352719 TGTTGCGTAGTTGTTTTTCATTTTT 57.647 28.000 0.00 0.00 0.00 1.94
4570 4931 6.952935 TGTTGCGTAGTTGTTTTTCATTTT 57.047 29.167 0.00 0.00 0.00 1.82
4571 4932 6.454981 GCTTGTTGCGTAGTTGTTTTTCATTT 60.455 34.615 0.00 0.00 0.00 2.32
4572 4933 5.005299 GCTTGTTGCGTAGTTGTTTTTCATT 59.995 36.000 0.00 0.00 0.00 2.57
4573 4934 4.502645 GCTTGTTGCGTAGTTGTTTTTCAT 59.497 37.500 0.00 0.00 0.00 2.57
4574 4935 3.854809 GCTTGTTGCGTAGTTGTTTTTCA 59.145 39.130 0.00 0.00 0.00 2.69
4575 4936 3.854809 TGCTTGTTGCGTAGTTGTTTTTC 59.145 39.130 0.00 0.00 46.63 2.29
4576 4937 3.839293 TGCTTGTTGCGTAGTTGTTTTT 58.161 36.364 0.00 0.00 46.63 1.94
4577 4938 3.495670 TGCTTGTTGCGTAGTTGTTTT 57.504 38.095 0.00 0.00 46.63 2.43
4578 4939 3.371168 CATGCTTGTTGCGTAGTTGTTT 58.629 40.909 0.00 0.00 46.63 2.83
4579 4940 2.858260 GCATGCTTGTTGCGTAGTTGTT 60.858 45.455 11.37 0.00 46.63 2.83
4580 4941 1.334960 GCATGCTTGTTGCGTAGTTGT 60.335 47.619 11.37 0.00 46.63 3.32
4581 4942 1.069022 AGCATGCTTGTTGCGTAGTTG 60.069 47.619 16.30 0.00 46.63 3.16
4582 4943 1.238439 AGCATGCTTGTTGCGTAGTT 58.762 45.000 16.30 0.00 46.63 2.24
4583 4944 2.093306 TAGCATGCTTGTTGCGTAGT 57.907 45.000 28.02 0.00 46.63 2.73
4584 4945 2.609002 TCATAGCATGCTTGTTGCGTAG 59.391 45.455 28.02 5.68 46.63 3.51
4585 4946 2.626840 TCATAGCATGCTTGTTGCGTA 58.373 42.857 28.02 5.06 46.63 4.42
4586 4947 1.452110 TCATAGCATGCTTGTTGCGT 58.548 45.000 28.02 0.44 46.63 5.24
4587 4948 2.547913 TTCATAGCATGCTTGTTGCG 57.452 45.000 28.02 8.33 46.63 4.85
4588 4949 4.266976 GTGATTTCATAGCATGCTTGTTGC 59.733 41.667 28.02 10.27 43.25 4.17
4589 4950 5.404096 TGTGATTTCATAGCATGCTTGTTG 58.596 37.500 28.02 20.15 0.00 3.33
4590 4951 5.648178 TGTGATTTCATAGCATGCTTGTT 57.352 34.783 28.02 8.66 0.00 2.83
4591 4952 5.047872 TGTTGTGATTTCATAGCATGCTTGT 60.048 36.000 28.02 12.67 0.00 3.16
4592 4953 5.404096 TGTTGTGATTTCATAGCATGCTTG 58.596 37.500 28.02 21.95 0.00 4.01
4593 4954 5.648178 TGTTGTGATTTCATAGCATGCTT 57.352 34.783 28.02 11.07 0.00 3.91
4594 4955 5.648178 TTGTTGTGATTTCATAGCATGCT 57.352 34.783 25.99 25.99 29.62 3.79
4595 4956 6.709145 TTTTGTTGTGATTTCATAGCATGC 57.291 33.333 10.51 10.51 29.62 4.06
4648 5009 9.942850 TGAGATGAAGAGAATATTGTGTTACAA 57.057 29.630 0.00 0.00 42.95 2.41
4649 5010 9.942850 TTGAGATGAAGAGAATATTGTGTTACA 57.057 29.630 0.00 0.00 0.00 2.41
4658 5019 9.703892 CCGAGTATTTTGAGATGAAGAGAATAT 57.296 33.333 0.00 0.00 0.00 1.28
4659 5020 7.653713 GCCGAGTATTTTGAGATGAAGAGAATA 59.346 37.037 0.00 0.00 0.00 1.75
4660 5021 6.481644 GCCGAGTATTTTGAGATGAAGAGAAT 59.518 38.462 0.00 0.00 0.00 2.40
4661 5022 5.812642 GCCGAGTATTTTGAGATGAAGAGAA 59.187 40.000 0.00 0.00 0.00 2.87
4662 5023 5.352284 GCCGAGTATTTTGAGATGAAGAGA 58.648 41.667 0.00 0.00 0.00 3.10
4663 5024 4.208047 CGCCGAGTATTTTGAGATGAAGAG 59.792 45.833 0.00 0.00 0.00 2.85
4664 5025 4.112634 CGCCGAGTATTTTGAGATGAAGA 58.887 43.478 0.00 0.00 0.00 2.87
4665 5026 3.865745 ACGCCGAGTATTTTGAGATGAAG 59.134 43.478 0.00 0.00 0.00 3.02
4666 5027 3.857052 ACGCCGAGTATTTTGAGATGAA 58.143 40.909 0.00 0.00 0.00 2.57
4667 5028 3.520290 ACGCCGAGTATTTTGAGATGA 57.480 42.857 0.00 0.00 0.00 2.92
4678 5039 4.924305 ATGAAACCTAATACGCCGAGTA 57.076 40.909 0.00 0.00 40.03 2.59
4679 5040 3.814005 ATGAAACCTAATACGCCGAGT 57.186 42.857 0.00 0.00 0.00 4.18
4680 5041 4.684703 CCTAATGAAACCTAATACGCCGAG 59.315 45.833 0.00 0.00 0.00 4.63
4681 5042 4.341806 TCCTAATGAAACCTAATACGCCGA 59.658 41.667 0.00 0.00 0.00 5.54
4682 5043 4.446719 GTCCTAATGAAACCTAATACGCCG 59.553 45.833 0.00 0.00 0.00 6.46
4683 5044 5.362263 TGTCCTAATGAAACCTAATACGCC 58.638 41.667 0.00 0.00 0.00 5.68
4684 5045 6.511282 GCTTGTCCTAATGAAACCTAATACGC 60.511 42.308 0.00 0.00 0.00 4.42
4685 5046 6.537301 TGCTTGTCCTAATGAAACCTAATACG 59.463 38.462 0.00 0.00 0.00 3.06
4686 5047 7.859325 TGCTTGTCCTAATGAAACCTAATAC 57.141 36.000 0.00 0.00 0.00 1.89
4687 5048 9.474313 AAATGCTTGTCCTAATGAAACCTAATA 57.526 29.630 0.00 0.00 0.00 0.98
4688 5049 7.961326 AATGCTTGTCCTAATGAAACCTAAT 57.039 32.000 0.00 0.00 0.00 1.73
4689 5050 7.450014 TCAAATGCTTGTCCTAATGAAACCTAA 59.550 33.333 0.00 0.00 33.94 2.69
4690 5051 6.945435 TCAAATGCTTGTCCTAATGAAACCTA 59.055 34.615 0.00 0.00 33.94 3.08
4691 5052 5.774690 TCAAATGCTTGTCCTAATGAAACCT 59.225 36.000 0.00 0.00 33.94 3.50
4692 5053 5.863935 GTCAAATGCTTGTCCTAATGAAACC 59.136 40.000 0.00 0.00 33.94 3.27
4693 5054 5.569059 CGTCAAATGCTTGTCCTAATGAAAC 59.431 40.000 0.00 0.00 33.94 2.78
4694 5055 5.471797 TCGTCAAATGCTTGTCCTAATGAAA 59.528 36.000 0.00 0.00 33.94 2.69
4695 5056 5.000591 TCGTCAAATGCTTGTCCTAATGAA 58.999 37.500 0.00 0.00 33.94 2.57
4696 5057 4.574892 TCGTCAAATGCTTGTCCTAATGA 58.425 39.130 0.00 0.00 33.94 2.57
4697 5058 4.944962 TCGTCAAATGCTTGTCCTAATG 57.055 40.909 0.00 0.00 33.94 1.90
4698 5059 4.142902 CGTTCGTCAAATGCTTGTCCTAAT 60.143 41.667 0.00 0.00 33.94 1.73
4699 5060 3.185594 CGTTCGTCAAATGCTTGTCCTAA 59.814 43.478 0.00 0.00 33.94 2.69
4700 5061 2.734606 CGTTCGTCAAATGCTTGTCCTA 59.265 45.455 0.00 0.00 33.94 2.94
4701 5062 1.531149 CGTTCGTCAAATGCTTGTCCT 59.469 47.619 0.00 0.00 33.94 3.85
4702 5063 1.263217 ACGTTCGTCAAATGCTTGTCC 59.737 47.619 0.00 0.00 33.94 4.02
4703 5064 2.663279 ACGTTCGTCAAATGCTTGTC 57.337 45.000 0.00 0.00 33.94 3.18
4704 5065 3.414549 AAACGTTCGTCAAATGCTTGT 57.585 38.095 0.00 0.00 33.94 3.16
4705 5066 4.523813 AGTAAACGTTCGTCAAATGCTTG 58.476 39.130 0.00 0.00 0.00 4.01
4706 5067 4.510340 AGAGTAAACGTTCGTCAAATGCTT 59.490 37.500 0.00 0.00 0.00 3.91
4707 5068 4.056050 AGAGTAAACGTTCGTCAAATGCT 58.944 39.130 0.00 0.00 0.00 3.79
4708 5069 4.385244 AGAGTAAACGTTCGTCAAATGC 57.615 40.909 0.00 0.00 0.00 3.56
4709 5070 6.442487 TGTAGAGTAAACGTTCGTCAAATG 57.558 37.500 0.00 0.00 0.00 2.32
4710 5071 7.467557 TTTGTAGAGTAAACGTTCGTCAAAT 57.532 32.000 0.00 0.00 0.00 2.32
4711 5072 6.884096 TTTGTAGAGTAAACGTTCGTCAAA 57.116 33.333 0.00 4.23 0.00 2.69
4712 5073 8.746922 ATATTTGTAGAGTAAACGTTCGTCAA 57.253 30.769 0.00 0.00 0.00 3.18
4740 5101 8.756864 GGCTTCAAATTTTATGTCACGTAAAAA 58.243 29.630 17.01 2.22 35.41 1.94
4741 5102 7.921214 TGGCTTCAAATTTTATGTCACGTAAAA 59.079 29.630 15.71 15.71 36.00 1.52
4742 5103 7.426410 TGGCTTCAAATTTTATGTCACGTAAA 58.574 30.769 0.00 0.00 0.00 2.01
4743 5104 6.971602 TGGCTTCAAATTTTATGTCACGTAA 58.028 32.000 0.00 0.00 0.00 3.18
4744 5105 6.561737 TGGCTTCAAATTTTATGTCACGTA 57.438 33.333 0.00 0.00 0.00 3.57
4745 5106 5.446143 TGGCTTCAAATTTTATGTCACGT 57.554 34.783 0.00 0.00 0.00 4.49
4746 5107 6.949578 AATGGCTTCAAATTTTATGTCACG 57.050 33.333 0.00 0.00 0.00 4.35
4747 5108 7.898946 GCTAATGGCTTCAAATTTTATGTCAC 58.101 34.615 0.00 0.00 38.06 3.67
4763 5124 6.266330 ACTTTTGAAAGAAGAAGCTAATGGCT 59.734 34.615 10.26 0.00 45.22 4.75
4764 5125 6.450545 ACTTTTGAAAGAAGAAGCTAATGGC 58.549 36.000 10.26 0.00 39.31 4.40
4765 5126 8.023706 GGTACTTTTGAAAGAAGAAGCTAATGG 58.976 37.037 10.26 0.00 39.31 3.16
4766 5127 8.787852 AGGTACTTTTGAAAGAAGAAGCTAATG 58.212 33.333 10.26 0.00 39.31 1.90
4767 5128 8.926092 AGGTACTTTTGAAAGAAGAAGCTAAT 57.074 30.769 10.26 0.00 39.31 1.73
4770 5131 8.926092 AATAGGTACTTTTGAAAGAAGAAGCT 57.074 30.769 10.26 9.11 41.75 3.74
4771 5132 7.958025 CGAATAGGTACTTTTGAAAGAAGAAGC 59.042 37.037 10.26 3.28 41.75 3.86
4772 5133 8.989980 ACGAATAGGTACTTTTGAAAGAAGAAG 58.010 33.333 10.26 0.00 41.75 2.85
4773 5134 8.770828 CACGAATAGGTACTTTTGAAAGAAGAA 58.229 33.333 10.26 0.00 41.75 2.52
4774 5135 7.386848 CCACGAATAGGTACTTTTGAAAGAAGA 59.613 37.037 10.26 0.00 41.75 2.87
4775 5136 7.172703 ACCACGAATAGGTACTTTTGAAAGAAG 59.827 37.037 10.26 0.00 41.75 2.85
4776 5137 6.993902 ACCACGAATAGGTACTTTTGAAAGAA 59.006 34.615 10.26 0.00 41.75 2.52
4777 5138 6.527423 ACCACGAATAGGTACTTTTGAAAGA 58.473 36.000 10.26 0.00 41.75 2.52
4778 5139 6.796705 ACCACGAATAGGTACTTTTGAAAG 57.203 37.500 2.06 2.06 41.75 2.62
4779 5140 8.723311 CATAACCACGAATAGGTACTTTTGAAA 58.277 33.333 0.00 0.00 41.75 2.69
4780 5141 8.095792 TCATAACCACGAATAGGTACTTTTGAA 58.904 33.333 0.00 0.00 41.75 2.69
4781 5142 7.613585 TCATAACCACGAATAGGTACTTTTGA 58.386 34.615 0.00 0.00 41.75 2.69
4782 5143 7.837202 TCATAACCACGAATAGGTACTTTTG 57.163 36.000 0.00 0.00 41.75 2.44
4783 5144 8.044908 ACATCATAACCACGAATAGGTACTTTT 58.955 33.333 0.00 0.00 41.75 2.27
4784 5145 7.562135 ACATCATAACCACGAATAGGTACTTT 58.438 34.615 0.00 0.00 41.75 2.66
4785 5146 7.120923 ACATCATAACCACGAATAGGTACTT 57.879 36.000 0.00 0.00 41.75 2.24
4786 5147 6.726490 ACATCATAACCACGAATAGGTACT 57.274 37.500 0.00 0.00 46.37 2.73
4789 5150 9.871238 GATATAACATCATAACCACGAATAGGT 57.129 33.333 0.00 0.00 42.34 3.08
4790 5151 9.869757 TGATATAACATCATAACCACGAATAGG 57.130 33.333 0.00 0.00 0.00 2.57
4829 5190 9.520515 ACTTTGACCAACAATTAGACTATCAAT 57.479 29.630 0.00 0.00 38.36 2.57
4830 5191 8.783093 CACTTTGACCAACAATTAGACTATCAA 58.217 33.333 0.00 0.00 38.36 2.57
4831 5192 7.936847 ACACTTTGACCAACAATTAGACTATCA 59.063 33.333 0.00 0.00 38.36 2.15
4832 5193 8.324163 ACACTTTGACCAACAATTAGACTATC 57.676 34.615 0.00 0.00 38.36 2.08
4833 5194 8.567948 CAACACTTTGACCAACAATTAGACTAT 58.432 33.333 0.00 0.00 38.36 2.12
4834 5195 7.468084 GCAACACTTTGACCAACAATTAGACTA 60.468 37.037 0.00 0.00 38.36 2.59
4835 5196 6.680378 GCAACACTTTGACCAACAATTAGACT 60.680 38.462 0.00 0.00 38.36 3.24
4836 5197 5.458779 GCAACACTTTGACCAACAATTAGAC 59.541 40.000 0.00 0.00 38.36 2.59
4837 5198 5.451242 GGCAACACTTTGACCAACAATTAGA 60.451 40.000 0.00 0.00 34.18 2.10
4838 5199 4.744631 GGCAACACTTTGACCAACAATTAG 59.255 41.667 0.00 0.00 34.18 1.73
4839 5200 4.688021 GGCAACACTTTGACCAACAATTA 58.312 39.130 0.00 0.00 34.18 1.40
4840 5201 3.530535 GGCAACACTTTGACCAACAATT 58.469 40.909 0.00 0.00 34.18 2.32
4841 5202 3.177997 GGCAACACTTTGACCAACAAT 57.822 42.857 0.00 0.00 34.18 2.71
4842 5203 2.663826 GGCAACACTTTGACCAACAA 57.336 45.000 0.00 0.00 34.18 2.83
4848 5209 4.379339 TTTGTTAGGGCAACACTTTGAC 57.621 40.909 0.00 0.00 46.80 3.18
4849 5210 5.407407 TTTTTGTTAGGGCAACACTTTGA 57.593 34.783 0.00 0.00 46.80 2.69
4875 5236 9.396022 CCCTCTGTTTCACAATACAAAGTATAT 57.604 33.333 0.00 0.00 0.00 0.86
4876 5237 8.598916 TCCCTCTGTTTCACAATACAAAGTATA 58.401 33.333 0.00 0.00 0.00 1.47
4877 5238 7.458397 TCCCTCTGTTTCACAATACAAAGTAT 58.542 34.615 0.00 0.00 0.00 2.12
4878 5239 6.833041 TCCCTCTGTTTCACAATACAAAGTA 58.167 36.000 0.00 0.00 0.00 2.24
4879 5240 5.690865 TCCCTCTGTTTCACAATACAAAGT 58.309 37.500 0.00 0.00 0.00 2.66
4880 5241 5.765182 ACTCCCTCTGTTTCACAATACAAAG 59.235 40.000 0.00 0.00 0.00 2.77
4881 5242 5.690865 ACTCCCTCTGTTTCACAATACAAA 58.309 37.500 0.00 0.00 0.00 2.83
4882 5243 5.304686 ACTCCCTCTGTTTCACAATACAA 57.695 39.130 0.00 0.00 0.00 2.41
4883 5244 4.974645 ACTCCCTCTGTTTCACAATACA 57.025 40.909 0.00 0.00 0.00 2.29
4884 5245 9.694137 GTATATACTCCCTCTGTTTCACAATAC 57.306 37.037 5.58 0.00 0.00 1.89
4885 5246 9.429109 TGTATATACTCCCTCTGTTTCACAATA 57.571 33.333 13.89 0.00 0.00 1.90
4886 5247 8.319057 TGTATATACTCCCTCTGTTTCACAAT 57.681 34.615 13.89 0.00 0.00 2.71
4887 5248 7.727578 TGTATATACTCCCTCTGTTTCACAA 57.272 36.000 13.89 0.00 0.00 3.33
4888 5249 7.727578 TTGTATATACTCCCTCTGTTTCACA 57.272 36.000 13.89 0.00 0.00 3.58
4889 5250 7.171678 GCATTGTATATACTCCCTCTGTTTCAC 59.828 40.741 13.89 0.00 0.00 3.18
4890 5251 7.147567 TGCATTGTATATACTCCCTCTGTTTCA 60.148 37.037 13.89 0.00 0.00 2.69
4891 5252 7.217200 TGCATTGTATATACTCCCTCTGTTTC 58.783 38.462 13.89 0.00 0.00 2.78
4892 5253 7.136822 TGCATTGTATATACTCCCTCTGTTT 57.863 36.000 13.89 0.00 0.00 2.83
4893 5254 6.747414 TGCATTGTATATACTCCCTCTGTT 57.253 37.500 13.89 0.00 0.00 3.16
4894 5255 6.747414 TTGCATTGTATATACTCCCTCTGT 57.253 37.500 13.89 0.00 0.00 3.41
4895 5256 8.627208 AATTTGCATTGTATATACTCCCTCTG 57.373 34.615 13.89 4.20 0.00 3.35
4896 5257 9.646522 AAAATTTGCATTGTATATACTCCCTCT 57.353 29.630 13.89 0.00 0.00 3.69
4907 5268 9.933723 AGAAAGCTTCTAAAATTTGCATTGTAT 57.066 25.926 0.00 0.00 38.49 2.29
4908 5269 9.762933 AAGAAAGCTTCTAAAATTTGCATTGTA 57.237 25.926 0.00 0.00 39.61 2.41
4909 5270 8.667076 AAGAAAGCTTCTAAAATTTGCATTGT 57.333 26.923 0.00 0.00 39.61 2.71
4920 5281 9.463443 GTCTTGCAAAATAAGAAAGCTTCTAAA 57.537 29.630 0.00 0.00 39.61 1.85
4921 5282 7.803189 CGTCTTGCAAAATAAGAAAGCTTCTAA 59.197 33.333 0.00 0.00 39.61 2.10
4922 5283 7.172532 TCGTCTTGCAAAATAAGAAAGCTTCTA 59.827 33.333 0.00 0.00 39.61 2.10
4923 5284 6.017109 TCGTCTTGCAAAATAAGAAAGCTTCT 60.017 34.615 0.00 0.00 43.15 2.85
4924 5285 6.086896 GTCGTCTTGCAAAATAAGAAAGCTTC 59.913 38.462 0.00 0.00 36.06 3.86
4925 5286 5.915196 GTCGTCTTGCAAAATAAGAAAGCTT 59.085 36.000 0.00 0.00 36.06 3.74
4926 5287 5.008613 TGTCGTCTTGCAAAATAAGAAAGCT 59.991 36.000 0.00 0.00 36.06 3.74
4927 5288 5.212194 TGTCGTCTTGCAAAATAAGAAAGC 58.788 37.500 0.00 0.00 36.06 3.51
4928 5289 6.690957 TGTTGTCGTCTTGCAAAATAAGAAAG 59.309 34.615 0.00 0.00 36.06 2.62
4929 5290 6.556212 TGTTGTCGTCTTGCAAAATAAGAAA 58.444 32.000 0.00 0.00 36.06 2.52
4930 5291 6.125327 TGTTGTCGTCTTGCAAAATAAGAA 57.875 33.333 0.00 0.00 36.06 2.52
4931 5292 5.743026 TGTTGTCGTCTTGCAAAATAAGA 57.257 34.783 0.00 0.00 32.08 2.10
4932 5293 6.804534 TTTGTTGTCGTCTTGCAAAATAAG 57.195 33.333 0.00 0.00 0.00 1.73
4933 5294 9.469807 AATATTTGTTGTCGTCTTGCAAAATAA 57.530 25.926 0.00 0.00 33.60 1.40
4934 5295 9.469807 AAATATTTGTTGTCGTCTTGCAAAATA 57.530 25.926 0.00 0.00 33.60 1.40
4935 5296 7.945033 AATATTTGTTGTCGTCTTGCAAAAT 57.055 28.000 0.00 0.00 33.60 1.82
4936 5297 7.489435 TGAAATATTTGTTGTCGTCTTGCAAAA 59.511 29.630 5.17 0.00 33.60 2.44
4937 5298 6.975197 TGAAATATTTGTTGTCGTCTTGCAAA 59.025 30.769 5.17 0.00 34.25 3.68
4938 5299 6.499172 TGAAATATTTGTTGTCGTCTTGCAA 58.501 32.000 5.17 0.00 0.00 4.08
4939 5300 6.066054 TGAAATATTTGTTGTCGTCTTGCA 57.934 33.333 5.17 0.00 0.00 4.08
4940 5301 5.569059 CCTGAAATATTTGTTGTCGTCTTGC 59.431 40.000 5.17 0.00 0.00 4.01
4941 5302 6.898041 TCCTGAAATATTTGTTGTCGTCTTG 58.102 36.000 5.17 0.00 0.00 3.02
4942 5303 6.934645 TCTCCTGAAATATTTGTTGTCGTCTT 59.065 34.615 5.17 0.00 0.00 3.01
4943 5304 6.464222 TCTCCTGAAATATTTGTTGTCGTCT 58.536 36.000 5.17 0.00 0.00 4.18
4944 5305 6.721571 TCTCCTGAAATATTTGTTGTCGTC 57.278 37.500 5.17 0.00 0.00 4.20
4945 5306 7.530010 CAATCTCCTGAAATATTTGTTGTCGT 58.470 34.615 5.17 0.00 0.00 4.34
4946 5307 6.470235 GCAATCTCCTGAAATATTTGTTGTCG 59.530 38.462 5.17 0.00 0.00 4.35
4947 5308 7.315142 TGCAATCTCCTGAAATATTTGTTGTC 58.685 34.615 5.17 0.00 0.00 3.18
4948 5309 7.230849 TGCAATCTCCTGAAATATTTGTTGT 57.769 32.000 5.17 0.00 0.00 3.32
4949 5310 8.712285 ATTGCAATCTCCTGAAATATTTGTTG 57.288 30.769 5.99 1.34 0.00 3.33
4950 5311 9.807649 GTATTGCAATCTCCTGAAATATTTGTT 57.192 29.630 16.86 0.00 30.97 2.83
4951 5312 8.970020 TGTATTGCAATCTCCTGAAATATTTGT 58.030 29.630 16.86 0.00 30.97 2.83
4952 5313 9.806203 TTGTATTGCAATCTCCTGAAATATTTG 57.194 29.630 16.86 0.00 30.97 2.32
4957 5318 9.729281 AAAAATTGTATTGCAATCTCCTGAAAT 57.271 25.926 16.86 4.11 46.29 2.17
4981 5342 9.337396 AGACAATGTGATTCAGTAGTACAAAAA 57.663 29.630 2.52 0.00 0.00 1.94
4982 5343 8.773645 CAGACAATGTGATTCAGTAGTACAAAA 58.226 33.333 2.52 0.00 0.00 2.44
4983 5344 8.147704 TCAGACAATGTGATTCAGTAGTACAAA 58.852 33.333 2.52 0.00 0.00 2.83
4984 5345 7.666623 TCAGACAATGTGATTCAGTAGTACAA 58.333 34.615 2.52 0.00 0.00 2.41
4985 5346 7.227049 TCAGACAATGTGATTCAGTAGTACA 57.773 36.000 2.52 0.00 0.00 2.90
4986 5347 6.754209 CCTCAGACAATGTGATTCAGTAGTAC 59.246 42.308 0.00 0.00 0.00 2.73
4987 5348 6.867550 CCTCAGACAATGTGATTCAGTAGTA 58.132 40.000 0.00 0.00 0.00 1.82
4988 5349 5.728471 CCTCAGACAATGTGATTCAGTAGT 58.272 41.667 0.00 0.00 0.00 2.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.