Multiple sequence alignment - TraesCS4D01G233600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G233600 chr4D 100.000 3924 0 0 1 3924 394152727 394148804 0.000000e+00 7247.0
1 TraesCS4D01G233600 chr4D 100.000 1273 0 0 4317 5589 394148411 394147139 0.000000e+00 2351.0
2 TraesCS4D01G233600 chr4D 84.647 482 42 15 3130 3581 30519909 30519430 8.540000e-123 451.0
3 TraesCS4D01G233600 chr4D 100.000 67 0 0 4317 4383 479955383 479955449 2.110000e-24 124.0
4 TraesCS4D01G233600 chr4B 94.008 1185 34 19 865 2040 483770070 483768914 0.000000e+00 1760.0
5 TraesCS4D01G233600 chr4B 92.675 628 45 1 2513 3139 483767373 483766746 0.000000e+00 904.0
6 TraesCS4D01G233600 chr4B 91.993 537 26 9 4412 4941 483766675 483766149 0.000000e+00 737.0
7 TraesCS4D01G233600 chr4B 90.336 476 36 3 2038 2510 483767874 483767406 2.860000e-172 616.0
8 TraesCS4D01G233600 chr4B 91.005 189 5 3 693 877 483775553 483775373 1.560000e-60 244.0
9 TraesCS4D01G233600 chr4B 90.833 120 11 0 4979 5098 483766167 483766048 1.610000e-35 161.0
10 TraesCS4D01G233600 chr4B 87.500 48 4 2 667 714 495634434 495634389 3.000000e-03 54.7
11 TraesCS4D01G233600 chr4A 93.979 1063 26 13 756 1805 75436333 75435296 0.000000e+00 1574.0
12 TraesCS4D01G233600 chr4A 98.143 377 7 0 2513 2889 75431540 75431164 0.000000e+00 658.0
13 TraesCS4D01G233600 chr4A 98.246 342 6 0 2169 2510 75431915 75431574 2.880000e-167 599.0
14 TraesCS4D01G233600 chr4A 91.546 414 22 7 4412 4814 75430455 75430044 4.890000e-155 558.0
15 TraesCS4D01G233600 chr4A 90.954 409 9 4 1777 2183 75432598 75432216 4.960000e-145 525.0
16 TraesCS4D01G233600 chr4A 96.850 254 8 0 2886 3139 75430776 75430523 5.180000e-115 425.0
17 TraesCS4D01G233600 chr4A 85.321 327 35 6 4941 5257 75429744 75429421 5.400000e-85 326.0
18 TraesCS4D01G233600 chr4A 93.023 129 8 1 4813 4941 75429806 75429679 2.660000e-43 187.0
19 TraesCS4D01G233600 chr4A 76.558 337 46 8 5284 5589 712655336 712655670 2.700000e-33 154.0
20 TraesCS4D01G233600 chr4A 87.692 130 15 1 5284 5412 571784026 571784155 3.490000e-32 150.0
21 TraesCS4D01G233600 chr4A 75.942 345 44 11 5284 5589 30740608 30740952 2.100000e-29 141.0
22 TraesCS4D01G233600 chr4A 100.000 30 0 0 667 696 616891139 616891168 7.820000e-04 56.5
23 TraesCS4D01G233600 chr7D 83.634 831 77 24 3138 3921 240775281 240776099 0.000000e+00 726.0
24 TraesCS4D01G233600 chr7D 82.130 845 94 29 3134 3924 578729609 578728768 0.000000e+00 671.0
25 TraesCS4D01G233600 chr7D 90.164 183 18 0 2543 2725 93781277 93781095 7.240000e-59 239.0
26 TraesCS4D01G233600 chr7D 90.751 173 13 3 3256 3427 193218096 193217926 1.570000e-55 228.0
27 TraesCS4D01G233600 chr7D 93.750 112 6 1 3814 3924 240775490 240775379 3.460000e-37 167.0
28 TraesCS4D01G233600 chr7D 82.692 156 20 7 5134 5287 173900781 173900931 1.260000e-26 132.0
29 TraesCS4D01G233600 chr7D 74.825 286 55 11 2160 2439 466669827 466669553 4.580000e-21 113.0
30 TraesCS4D01G233600 chr3D 83.597 823 83 26 3139 3921 93827101 93826291 0.000000e+00 725.0
31 TraesCS4D01G233600 chr3D 82.033 846 91 29 3138 3924 550641507 550640664 0.000000e+00 664.0
32 TraesCS4D01G233600 chr3D 84.709 412 41 17 1045 1437 7433115 7433523 5.250000e-105 392.0
33 TraesCS4D01G233600 chr3D 95.897 195 6 2 3138 3331 550640568 550640761 1.170000e-81 315.0
34 TraesCS4D01G233600 chr3D 84.307 274 31 5 3495 3767 261739949 261740211 2.000000e-64 257.0
35 TraesCS4D01G233600 chr3D 88.439 173 20 0 2267 2439 7434297 7434469 5.670000e-50 209.0
36 TraesCS4D01G233600 chr3D 93.578 109 6 1 3814 3921 600832497 600832605 1.610000e-35 161.0
37 TraesCS4D01G233600 chr3D 82.682 179 24 6 5113 5287 394193433 394193608 9.700000e-33 152.0
38 TraesCS4D01G233600 chr3D 81.006 179 17 14 5113 5287 593111355 593111520 5.880000e-25 126.0
39 TraesCS4D01G233600 chr3D 97.222 72 1 1 4317 4388 261739745 261739675 2.730000e-23 121.0
40 TraesCS4D01G233600 chr2A 83.770 801 72 28 3139 3920 507426058 507425297 0.000000e+00 706.0
41 TraesCS4D01G233600 chr2A 97.059 34 0 1 667 700 90592431 90592463 7.820000e-04 56.5
42 TraesCS4D01G233600 chr7A 82.801 814 100 23 3138 3924 85893553 85892753 0.000000e+00 691.0
43 TraesCS4D01G233600 chr7A 90.433 439 25 5 1 433 712100948 712100521 3.780000e-156 562.0
44 TraesCS4D01G233600 chr7A 84.340 530 62 10 3222 3730 705229611 705230140 3.010000e-137 499.0
45 TraesCS4D01G233600 chr7A 93.627 204 12 1 3129 3331 425779875 425780078 2.530000e-78 303.0
46 TraesCS4D01G233600 chr7A 89.175 194 15 5 3731 3920 705249314 705249505 2.600000e-58 237.0
47 TraesCS4D01G233600 chr7A 94.595 111 5 1 3814 3924 5348777 5348668 2.680000e-38 171.0
48 TraesCS4D01G233600 chr7A 75.942 345 44 11 5284 5589 534403536 534403192 2.100000e-29 141.0
49 TraesCS4D01G233600 chr7A 75.652 345 45 13 5284 5589 5486282 5486626 9.770000e-28 135.0
50 TraesCS4D01G233600 chr7A 75.723 346 43 13 5284 5589 691288947 691288603 9.770000e-28 135.0
51 TraesCS4D01G233600 chr7A 82.707 133 20 3 5284 5414 16292096 16291965 1.270000e-21 115.0
52 TraesCS4D01G233600 chr7A 97.143 35 1 0 667 701 79158469 79158503 6.050000e-05 60.2
53 TraesCS4D01G233600 chr5A 82.091 832 58 35 3140 3924 295072338 295071551 1.320000e-175 627.0
54 TraesCS4D01G233600 chr5A 90.661 439 24 5 1 433 605037604 605037177 8.130000e-158 568.0
55 TraesCS4D01G233600 chr5A 80.147 136 14 5 3362 3496 295071960 295071837 7.710000e-14 89.8
56 TraesCS4D01G233600 chr7B 94.531 384 20 1 283 665 30873099 30872716 4.820000e-165 592.0
57 TraesCS4D01G233600 chr7B 93.993 283 15 2 1 281 30874795 30874513 1.440000e-115 427.0
58 TraesCS4D01G233600 chr7B 91.304 184 16 0 2543 2726 46992832 46992649 9.290000e-63 252.0
59 TraesCS4D01G233600 chr7B 79.154 331 31 15 5297 5589 594412262 594412592 1.590000e-45 195.0
60 TraesCS4D01G233600 chr2D 85.600 500 50 16 3142 3639 375143421 375142942 6.460000e-139 505.0
61 TraesCS4D01G233600 chr2D 82.746 539 53 19 3420 3921 134403953 134404488 1.430000e-120 444.0
62 TraesCS4D01G233600 chr2D 82.908 509 46 17 3420 3924 609490255 609489784 2.410000e-113 420.0
63 TraesCS4D01G233600 chr2D 82.955 264 26 4 3680 3924 375123977 375123714 2.620000e-53 220.0
64 TraesCS4D01G233600 chr2D 82.123 179 20 9 5112 5287 86490633 86490802 5.840000e-30 143.0
65 TraesCS4D01G233600 chr2D 82.781 151 15 10 5113 5259 52235106 52235249 2.110000e-24 124.0
66 TraesCS4D01G233600 chr2D 100.000 67 0 0 4317 4383 472027764 472027830 2.110000e-24 124.0
67 TraesCS4D01G233600 chr2D 82.677 127 19 3 5285 5409 42629052 42629177 5.920000e-20 110.0
68 TraesCS4D01G233600 chr6D 99.621 264 1 0 667 930 14353832 14353569 3.030000e-132 483.0
69 TraesCS4D01G233600 chr6D 79.191 346 30 19 5285 5589 15375999 15375655 9.490000e-48 202.0
70 TraesCS4D01G233600 chr6D 94.444 108 5 1 3814 3921 409842662 409842768 1.250000e-36 165.0
71 TraesCS4D01G233600 chr5D 87.192 406 29 9 3130 3514 399644667 399644264 1.850000e-119 440.0
72 TraesCS4D01G233600 chr5D 85.321 436 35 16 3501 3921 371069134 371069555 1.860000e-114 424.0
73 TraesCS4D01G233600 chr5D 83.834 433 46 8 3142 3550 386728981 386728549 1.890000e-104 390.0
74 TraesCS4D01G233600 chr5D 95.408 196 7 2 3138 3331 386727732 386727927 1.510000e-80 311.0
75 TraesCS4D01G233600 chr5D 95.361 194 7 2 3138 3330 10792040 10791848 1.960000e-79 307.0
76 TraesCS4D01G233600 chr5D 83.972 287 25 8 3653 3921 492611109 492611392 7.190000e-64 255.0
77 TraesCS4D01G233600 chr5D 92.857 112 7 1 3814 3924 97344366 97344255 1.610000e-35 161.0
78 TraesCS4D01G233600 chr5D 82.486 177 24 5 5114 5287 380691871 380692043 1.250000e-31 148.0
79 TraesCS4D01G233600 chr5D 100.000 67 0 0 4317 4383 58537419 58537485 2.110000e-24 124.0
80 TraesCS4D01G233600 chr5D 89.011 91 7 3 4317 4404 10790787 10790697 5.920000e-20 110.0
81 TraesCS4D01G233600 chr5D 97.059 34 1 0 667 700 323527073 323527040 2.170000e-04 58.4
82 TraesCS4D01G233600 chr3A 82.965 452 44 23 1045 1465 12855655 12855206 1.470000e-100 377.0
83 TraesCS4D01G233600 chr3A 93.056 144 10 0 2296 2439 12854359 12854216 1.580000e-50 211.0
84 TraesCS4D01G233600 chr3A 94.595 111 6 0 3814 3924 408035153 408035043 7.440000e-39 172.0
85 TraesCS4D01G233600 chr3A 85.385 130 18 1 5284 5412 249861636 249861507 3.510000e-27 134.0
86 TraesCS4D01G233600 chr3B 82.660 421 45 22 1045 1439 9439359 9439777 1.150000e-91 348.0
87 TraesCS4D01G233600 chr3B 91.549 142 12 0 2298 2439 9440630 9440771 4.420000e-46 196.0
88 TraesCS4D01G233600 chr3B 76.042 288 49 15 2160 2439 780553411 780553136 1.260000e-26 132.0
89 TraesCS4D01G233600 chr3B 79.787 188 25 8 5411 5589 703031485 703031302 2.110000e-24 124.0
90 TraesCS4D01G233600 chr6A 81.366 322 31 13 5284 5589 53255979 53255671 9.360000e-58 235.0
91 TraesCS4D01G233600 chr6A 75.145 346 45 15 5284 5589 466325263 466325607 2.110000e-24 124.0
92 TraesCS4D01G233600 chr1D 85.915 213 18 7 3714 3924 73149764 73149562 3.390000e-52 217.0
93 TraesCS4D01G233600 chr1D 82.609 184 21 7 5113 5290 343883234 343883056 9.700000e-33 152.0
94 TraesCS4D01G233600 chr1D 100.000 67 0 0 4317 4383 486448894 486448828 2.110000e-24 124.0
95 TraesCS4D01G233600 chr1D 94.667 75 2 2 4317 4391 474135286 474135358 1.270000e-21 115.0
96 TraesCS4D01G233600 chr1D 96.970 33 1 0 667 699 376275138 376275106 7.820000e-04 56.5
97 TraesCS4D01G233600 chr5B 81.481 216 25 9 3556 3758 635174597 635174384 4.480000e-36 163.0
98 TraesCS4D01G233600 chr5B 76.812 345 41 11 5284 5589 611998832 611999176 2.080000e-34 158.0
99 TraesCS4D01G233600 chr1B 82.234 197 19 5 5409 5589 638956590 638956786 7.500000e-34 156.0
100 TraesCS4D01G233600 chr1B 82.778 180 17 8 5112 5287 532058941 532058772 1.250000e-31 148.0
101 TraesCS4D01G233600 chr1B 76.271 295 53 12 5302 5589 223131154 223131438 2.100000e-29 141.0
102 TraesCS4D01G233600 chr2B 76.418 335 48 6 5284 5589 381296359 381296027 9.700000e-33 152.0
103 TraesCS4D01G233600 chr2B 75.958 287 51 11 2160 2439 432934949 432935224 1.260000e-26 132.0
104 TraesCS4D01G233600 chr2B 79.474 190 25 10 5409 5588 150539113 150538928 7.600000e-24 122.0
105 TraesCS4D01G233600 chr2B 91.860 86 4 3 4317 4401 47559422 47559339 3.540000e-22 117.0
106 TraesCS4D01G233600 chr1A 81.915 188 16 12 5415 5586 67685842 67686027 5.840000e-30 143.0
107 TraesCS4D01G233600 chr1A 77.778 198 27 11 5409 5589 483132481 483132284 7.660000e-19 106.0
108 TraesCS4D01G233600 chr6B 75.362 345 44 14 5284 5589 414357660 414358002 1.630000e-25 128.0
109 TraesCS4D01G233600 chr6B 82.576 132 22 1 5284 5414 93985293 93985424 1.270000e-21 115.0
110 TraesCS4D01G233600 chr6B 94.595 37 1 1 667 703 599801008 599800973 7.820000e-04 56.5
111 TraesCS4D01G233600 chrUn 100.000 67 0 0 4317 4383 89398641 89398707 2.110000e-24 124.0
112 TraesCS4D01G233600 chrUn 96.970 33 1 0 667 699 158111437 158111405 7.820000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G233600 chr4D 394147139 394152727 5588 True 4799.0 7247 100.00000 1 5589 2 chr4D.!!$R2 5588
1 TraesCS4D01G233600 chr4B 483766048 483770070 4022 True 835.6 1760 91.96900 865 5098 5 chr4B.!!$R3 4233
2 TraesCS4D01G233600 chr4A 75429421 75436333 6912 True 606.5 1574 93.50775 756 5257 8 chr4A.!!$R1 4501
3 TraesCS4D01G233600 chr7D 240775281 240776099 818 False 726.0 726 83.63400 3138 3921 1 chr7D.!!$F2 783
4 TraesCS4D01G233600 chr7D 578728768 578729609 841 True 671.0 671 82.13000 3134 3924 1 chr7D.!!$R5 790
5 TraesCS4D01G233600 chr3D 93826291 93827101 810 True 725.0 725 83.59700 3139 3921 1 chr3D.!!$R1 782
6 TraesCS4D01G233600 chr3D 550640664 550641507 843 True 664.0 664 82.03300 3138 3924 1 chr3D.!!$R3 786
7 TraesCS4D01G233600 chr3D 7433115 7434469 1354 False 300.5 392 86.57400 1045 2439 2 chr3D.!!$F6 1394
8 TraesCS4D01G233600 chr2A 507425297 507426058 761 True 706.0 706 83.77000 3139 3920 1 chr2A.!!$R1 781
9 TraesCS4D01G233600 chr7A 85892753 85893553 800 True 691.0 691 82.80100 3138 3924 1 chr7A.!!$R3 786
10 TraesCS4D01G233600 chr7A 705229611 705230140 529 False 499.0 499 84.34000 3222 3730 1 chr7A.!!$F4 508
11 TraesCS4D01G233600 chr5A 295071551 295072338 787 True 358.4 627 81.11900 3140 3924 2 chr5A.!!$R2 784
12 TraesCS4D01G233600 chr7B 30872716 30874795 2079 True 509.5 592 94.26200 1 665 2 chr7B.!!$R2 664
13 TraesCS4D01G233600 chr2D 134403953 134404488 535 False 444.0 444 82.74600 3420 3921 1 chr2D.!!$F4 501
14 TraesCS4D01G233600 chr5D 10790697 10792040 1343 True 208.5 307 92.18600 3138 4404 2 chr5D.!!$R5 1266
15 TraesCS4D01G233600 chr3A 12854216 12855655 1439 True 294.0 377 88.01050 1045 2439 2 chr3A.!!$R3 1394
16 TraesCS4D01G233600 chr3B 9439359 9440771 1412 False 272.0 348 87.10450 1045 2439 2 chr3B.!!$F1 1394

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
669 2085 0.030638 CACAACAACTCTTTGCGGGG 59.969 55.0 0.00 0.0 36.00 5.73 F
1710 3178 0.034896 GGGAGCTTCCAACTGAACGA 59.965 55.0 6.02 0.0 38.64 3.85 F
2101 7762 1.972872 AAACCACTCCTGCTCTGTTG 58.027 50.0 0.00 0.0 0.00 3.33 F
3279 9684 0.036388 TTTCTCCACCCGCTGATGAC 60.036 55.0 0.00 0.0 0.00 3.06 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2185 8163 3.059733 CACCCAATTGTGAAAAATGCACG 60.060 43.478 4.43 0.0 38.55 5.34 R
3275 9680 1.668919 CGTTGACTAGTGCCACGTCAT 60.669 52.381 0.00 0.0 37.50 3.06 R
3859 11090 0.685097 ATGTGGCACTAGTCAACGGT 59.315 50.000 19.83 0.0 0.00 4.83 R
5132 12662 0.743688 AAATTGCTTCGTGCCACACA 59.256 45.000 0.00 0.0 42.00 3.72 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
139 141 2.572095 AATGGATCGCGACGGCAGAA 62.572 55.000 12.93 0.00 39.92 3.02
144 146 0.739462 ATCGCGACGGCAGAATCAAA 60.739 50.000 12.93 0.00 39.92 2.69
146 148 1.225745 GCGACGGCAGAATCAAACG 60.226 57.895 0.00 0.00 39.62 3.60
175 177 4.500887 CGTGAAGAAGTTGTAGGGAGAACA 60.501 45.833 0.00 0.00 31.23 3.18
199 201 2.632763 ATGGAGAGGATAGGGGTAGC 57.367 55.000 0.00 0.00 0.00 3.58
209 211 1.709578 TAGGGGTAGCTGCAGATCTG 58.290 55.000 20.43 18.84 0.00 2.90
213 215 1.484240 GGGTAGCTGCAGATCTGTTCT 59.516 52.381 23.38 18.27 33.90 3.01
237 239 1.100463 AACACGCATGACACCTGCAA 61.100 50.000 0.00 0.00 39.64 4.08
255 257 1.433837 AAGCGGTTGGTGTCGACAAC 61.434 55.000 26.70 26.70 45.60 3.32
267 269 1.340248 GTCGACAACAGGGACTTCTGA 59.660 52.381 11.55 0.00 34.60 3.27
273 275 4.583871 ACAACAGGGACTTCTGATTCATC 58.416 43.478 0.00 0.00 34.60 2.92
278 280 3.634397 GGACTTCTGATTCATCCCACA 57.366 47.619 0.00 0.00 0.00 4.17
279 281 4.162040 GGACTTCTGATTCATCCCACAT 57.838 45.455 0.00 0.00 0.00 3.21
280 282 4.133078 GGACTTCTGATTCATCCCACATC 58.867 47.826 0.00 0.00 0.00 3.06
333 1748 6.000219 AGCGAAAGGAATCATATACAGCAAT 59.000 36.000 0.00 0.00 0.00 3.56
413 1828 0.539051 CTGATCCAACTCTCCGCCTT 59.461 55.000 0.00 0.00 0.00 4.35
422 1837 1.152735 TCTCCGCCTTATCGCTCCT 60.153 57.895 0.00 0.00 0.00 3.69
435 1850 2.125512 CTCCTTTCCACCGAGGCG 60.126 66.667 0.00 0.00 37.29 5.52
448 1863 1.803289 GAGGCGACCAATTTGGAGC 59.197 57.895 22.19 22.62 40.96 4.70
468 1883 0.316841 CTTGCTCCCTCGCCTCTATC 59.683 60.000 0.00 0.00 0.00 2.08
512 1927 4.230964 ACCTGTAGGATCCTCTCTAACAGT 59.769 45.833 28.13 18.61 36.06 3.55
532 1947 5.240183 ACAGTCCAGAAGTTTGACAATCATG 59.760 40.000 0.00 0.00 0.00 3.07
551 1966 1.073284 TGTACCCACCTTCCTTTGAGC 59.927 52.381 0.00 0.00 0.00 4.26
595 2011 7.265673 TGAACGAAAATTTGGTAAATGTTCCA 58.734 30.769 10.16 2.77 40.47 3.53
599 2015 6.423604 CGAAAATTTGGTAAATGTTCCAGCTT 59.576 34.615 10.16 0.00 40.47 3.74
619 2035 3.251479 TGATGGAACGACCTGATTCTG 57.749 47.619 0.00 0.00 39.86 3.02
628 2044 6.036191 GGAACGACCTGATTCTGTCTAAATTC 59.964 42.308 0.00 0.00 35.41 2.17
643 2059 9.556030 CTGTCTAAATTCGGGATTAAAGAAAAC 57.444 33.333 0.00 0.00 0.00 2.43
665 2081 4.142600 ACAGAACTCACAACAACTCTTTGC 60.143 41.667 0.00 0.00 36.00 3.68
666 2082 3.063997 AGAACTCACAACAACTCTTTGCG 59.936 43.478 0.00 0.00 36.00 4.85
667 2083 1.670811 ACTCACAACAACTCTTTGCGG 59.329 47.619 0.00 0.00 36.00 5.69
668 2084 1.002468 CTCACAACAACTCTTTGCGGG 60.002 52.381 0.00 0.00 36.00 6.13
669 2085 0.030638 CACAACAACTCTTTGCGGGG 59.969 55.000 0.00 0.00 36.00 5.73
670 2086 0.106918 ACAACAACTCTTTGCGGGGA 60.107 50.000 0.00 0.00 36.00 4.81
671 2087 1.247567 CAACAACTCTTTGCGGGGAT 58.752 50.000 0.00 0.00 36.00 3.85
672 2088 1.200020 CAACAACTCTTTGCGGGGATC 59.800 52.381 0.00 0.00 36.00 3.36
673 2089 0.400213 ACAACTCTTTGCGGGGATCA 59.600 50.000 0.00 0.00 36.00 2.92
674 2090 1.202879 ACAACTCTTTGCGGGGATCAA 60.203 47.619 0.00 0.00 36.00 2.57
675 2091 1.200020 CAACTCTTTGCGGGGATCAAC 59.800 52.381 0.00 0.00 0.00 3.18
676 2092 0.693049 ACTCTTTGCGGGGATCAACT 59.307 50.000 0.00 0.00 0.00 3.16
677 2093 1.073923 ACTCTTTGCGGGGATCAACTT 59.926 47.619 0.00 0.00 0.00 2.66
678 2094 1.740025 CTCTTTGCGGGGATCAACTTC 59.260 52.381 0.00 0.00 0.00 3.01
679 2095 1.351017 TCTTTGCGGGGATCAACTTCT 59.649 47.619 0.00 0.00 0.00 2.85
680 2096 2.162681 CTTTGCGGGGATCAACTTCTT 58.837 47.619 0.00 0.00 0.00 2.52
681 2097 3.008594 TCTTTGCGGGGATCAACTTCTTA 59.991 43.478 0.00 0.00 0.00 2.10
682 2098 3.426787 TTGCGGGGATCAACTTCTTAA 57.573 42.857 0.00 0.00 0.00 1.85
683 2099 2.985896 TGCGGGGATCAACTTCTTAAG 58.014 47.619 0.00 0.00 0.00 1.85
684 2100 2.569853 TGCGGGGATCAACTTCTTAAGA 59.430 45.455 0.00 0.00 0.00 2.10
685 2101 3.008594 TGCGGGGATCAACTTCTTAAGAA 59.991 43.478 16.85 16.85 0.00 2.52
686 2102 4.200092 GCGGGGATCAACTTCTTAAGAAT 58.800 43.478 18.02 3.17 33.01 2.40
687 2103 4.035675 GCGGGGATCAACTTCTTAAGAATG 59.964 45.833 18.02 14.20 33.01 2.67
688 2104 5.186198 CGGGGATCAACTTCTTAAGAATGT 58.814 41.667 18.02 14.48 33.01 2.71
689 2105 6.346096 CGGGGATCAACTTCTTAAGAATGTA 58.654 40.000 18.02 5.44 33.01 2.29
690 2106 6.821665 CGGGGATCAACTTCTTAAGAATGTAA 59.178 38.462 18.02 10.37 33.01 2.41
691 2107 7.011482 CGGGGATCAACTTCTTAAGAATGTAAG 59.989 40.741 18.02 8.78 33.01 2.34
692 2108 8.047310 GGGGATCAACTTCTTAAGAATGTAAGA 58.953 37.037 18.02 16.78 38.14 2.10
693 2109 9.620259 GGGATCAACTTCTTAAGAATGTAAGAT 57.380 33.333 18.02 19.57 39.31 2.40
697 2113 9.923143 TCAACTTCTTAAGAATGTAAGATTCGA 57.077 29.630 18.02 2.06 39.31 3.71
708 2124 9.968870 AGAATGTAAGATTCGAATAAGAGGTAC 57.031 33.333 11.38 7.76 33.51 3.34
709 2125 9.745880 GAATGTAAGATTCGAATAAGAGGTACA 57.254 33.333 11.38 12.49 0.00 2.90
714 2130 8.664211 AAGATTCGAATAAGAGGTACATTTCC 57.336 34.615 11.38 0.00 0.00 3.13
715 2131 8.024145 AGATTCGAATAAGAGGTACATTTCCT 57.976 34.615 11.38 0.00 38.09 3.36
722 2138 3.562343 GAGGTACATTTCCTCTTCCCC 57.438 52.381 4.91 0.00 45.56 4.81
723 2139 3.116174 GAGGTACATTTCCTCTTCCCCT 58.884 50.000 4.91 0.00 45.56 4.79
724 2140 3.523972 GAGGTACATTTCCTCTTCCCCTT 59.476 47.826 4.91 0.00 45.56 3.95
725 2141 3.923425 AGGTACATTTCCTCTTCCCCTTT 59.077 43.478 0.00 0.00 0.00 3.11
726 2142 5.105853 AGGTACATTTCCTCTTCCCCTTTA 58.894 41.667 0.00 0.00 0.00 1.85
727 2143 5.736616 AGGTACATTTCCTCTTCCCCTTTAT 59.263 40.000 0.00 0.00 0.00 1.40
728 2144 6.912561 AGGTACATTTCCTCTTCCCCTTTATA 59.087 38.462 0.00 0.00 0.00 0.98
729 2145 7.576649 AGGTACATTTCCTCTTCCCCTTTATAT 59.423 37.037 0.00 0.00 0.00 0.86
730 2146 8.225416 GGTACATTTCCTCTTCCCCTTTATATT 58.775 37.037 0.00 0.00 0.00 1.28
731 2147 9.067986 GTACATTTCCTCTTCCCCTTTATATTG 57.932 37.037 0.00 0.00 0.00 1.90
732 2148 7.882755 ACATTTCCTCTTCCCCTTTATATTGA 58.117 34.615 0.00 0.00 0.00 2.57
733 2149 7.780271 ACATTTCCTCTTCCCCTTTATATTGAC 59.220 37.037 0.00 0.00 0.00 3.18
734 2150 5.546621 TCCTCTTCCCCTTTATATTGACG 57.453 43.478 0.00 0.00 0.00 4.35
735 2151 4.347000 TCCTCTTCCCCTTTATATTGACGG 59.653 45.833 0.00 0.00 0.00 4.79
736 2152 4.347000 CCTCTTCCCCTTTATATTGACGGA 59.653 45.833 0.00 0.00 0.00 4.69
737 2153 5.013183 CCTCTTCCCCTTTATATTGACGGAT 59.987 44.000 0.00 0.00 0.00 4.18
738 2154 6.212791 CCTCTTCCCCTTTATATTGACGGATA 59.787 42.308 0.00 0.00 0.00 2.59
739 2155 7.092846 CCTCTTCCCCTTTATATTGACGGATAT 60.093 40.741 0.00 0.00 0.00 1.63
740 2156 8.214721 TCTTCCCCTTTATATTGACGGATATT 57.785 34.615 0.00 0.00 0.00 1.28
741 2157 8.665906 TCTTCCCCTTTATATTGACGGATATTT 58.334 33.333 0.00 0.00 0.00 1.40
742 2158 9.953565 CTTCCCCTTTATATTGACGGATATTTA 57.046 33.333 0.00 0.00 0.00 1.40
751 2167 6.693315 ATTGACGGATATTTAAACTGTGGG 57.307 37.500 0.00 0.00 0.00 4.61
752 2168 4.519213 TGACGGATATTTAAACTGTGGGG 58.481 43.478 0.00 0.00 0.00 4.96
753 2169 4.225492 TGACGGATATTTAAACTGTGGGGA 59.775 41.667 0.00 0.00 0.00 4.81
754 2170 5.182169 ACGGATATTTAAACTGTGGGGAA 57.818 39.130 0.00 0.00 0.00 3.97
862 2283 1.000283 CGACCACACTCTTCTGCTTCT 60.000 52.381 0.00 0.00 0.00 2.85
1218 2642 4.436998 GTCGAGTCCGGCACCCAG 62.437 72.222 0.00 0.00 40.69 4.45
1534 2997 3.441222 TGCTGTCCTGATATTTTGCTGTG 59.559 43.478 0.00 0.00 0.00 3.66
1597 3060 4.141892 TGGAAATATGCCAGGCAATTTGAG 60.142 41.667 26.37 0.00 43.62 3.02
1637 3102 7.604164 TGAACTAGAAACTTATTGCTCTTCAGG 59.396 37.037 0.00 0.00 0.00 3.86
1710 3178 0.034896 GGGAGCTTCCAACTGAACGA 59.965 55.000 6.02 0.00 38.64 3.85
1720 3188 2.788786 CCAACTGAACGAATTGCACAAC 59.211 45.455 0.00 0.00 0.00 3.32
1729 3197 5.940192 ACGAATTGCACAACTTTCTCATA 57.060 34.783 0.00 0.00 0.00 2.15
1730 3198 6.500684 ACGAATTGCACAACTTTCTCATAT 57.499 33.333 0.00 0.00 0.00 1.78
1731 3199 7.609760 ACGAATTGCACAACTTTCTCATATA 57.390 32.000 0.00 0.00 0.00 0.86
1732 3200 8.213518 ACGAATTGCACAACTTTCTCATATAT 57.786 30.769 0.00 0.00 0.00 0.86
1733 3201 9.325198 ACGAATTGCACAACTTTCTCATATATA 57.675 29.630 0.00 0.00 0.00 0.86
2036 6655 2.064014 GCTCTTTTTCTGCATGCAACC 58.936 47.619 22.88 0.00 0.00 3.77
2101 7762 1.972872 AAACCACTCCTGCTCTGTTG 58.027 50.000 0.00 0.00 0.00 3.33
2217 8195 4.594854 ATTGGGTGTGGCCGCACA 62.595 61.111 41.55 27.09 40.89 4.57
2510 8488 7.541091 ACCAATCTATATTAATCACTACGCACG 59.459 37.037 0.00 0.00 0.00 5.34
2511 8489 7.009265 CCAATCTATATTAATCACTACGCACGG 59.991 40.741 0.00 0.00 0.00 4.94
2596 8605 3.877508 AGAAAACTGTAGCACTGTTGGTC 59.122 43.478 10.58 10.78 39.64 4.02
2763 8772 9.502091 GTACTTGTGATGCCTAATATTTATCCA 57.498 33.333 0.00 0.00 0.00 3.41
2926 9326 8.948631 TCTAGAACAATGGATAGAAACATGAC 57.051 34.615 0.00 0.00 0.00 3.06
2927 9327 8.762645 TCTAGAACAATGGATAGAAACATGACT 58.237 33.333 0.00 0.00 0.00 3.41
2968 9368 7.617225 TGTACCTCAAAGCAAAGCTAATACTA 58.383 34.615 0.00 0.00 38.25 1.82
2998 9398 5.817296 TGCCAGAATGTCACATAACTACATC 59.183 40.000 0.00 0.00 32.80 3.06
3130 9531 2.158505 AGGGCTGCTGCTTGATAATCAT 60.159 45.455 15.64 0.00 39.59 2.45
3131 9532 2.626743 GGGCTGCTGCTTGATAATCATT 59.373 45.455 15.64 0.00 39.59 2.57
3132 9533 3.069158 GGGCTGCTGCTTGATAATCATTT 59.931 43.478 15.64 0.00 39.59 2.32
3133 9534 4.442472 GGGCTGCTGCTTGATAATCATTTT 60.442 41.667 15.64 0.00 39.59 1.82
3134 9535 4.506654 GGCTGCTGCTTGATAATCATTTTG 59.493 41.667 15.64 0.00 39.59 2.44
3135 9536 5.345702 GCTGCTGCTTGATAATCATTTTGA 58.654 37.500 8.53 0.00 36.03 2.69
3136 9537 5.459107 GCTGCTGCTTGATAATCATTTTGAG 59.541 40.000 8.53 0.00 36.03 3.02
3275 9680 0.536460 GGTTTTTCTCCACCCGCTGA 60.536 55.000 0.00 0.00 0.00 4.26
3279 9684 0.036388 TTTCTCCACCCGCTGATGAC 60.036 55.000 0.00 0.00 0.00 3.06
3316 9721 2.207229 GGTTTTGACCTGGGTGGGC 61.207 63.158 0.00 0.00 46.75 5.36
3707 10894 4.241555 GTGCGATGGCGGGGAGAT 62.242 66.667 0.00 0.00 44.10 2.75
3711 10898 3.877450 GATGGCGGGGAGATGGCA 61.877 66.667 0.00 0.00 45.22 4.92
3836 11067 3.587061 AGAGAGAGAGAGACCTGACAAGA 59.413 47.826 0.00 0.00 0.00 3.02
3882 11113 2.610479 CGTTGACTAGTGCCACATCAGT 60.610 50.000 0.00 0.00 0.00 3.41
4356 11587 4.398319 AGTGAACCACCCACTTTATTCAG 58.602 43.478 0.00 0.00 41.68 3.02
4358 11589 2.899303 ACCACCCACTTTATTCAGGG 57.101 50.000 0.00 0.00 46.96 4.45
4441 11719 2.224523 TGCTTTCATCGAAGGTCCTTGT 60.225 45.455 9.46 0.00 0.00 3.16
4449 11727 5.659525 TCATCGAAGGTCCTTGTTCCTTATA 59.340 40.000 9.46 0.00 43.12 0.98
4605 11886 2.970974 GAGCTGCGCCCAAAGTGTC 61.971 63.158 4.18 0.00 0.00 3.67
4612 11893 2.617274 GCCCAAAGTGTCCGAGTGC 61.617 63.158 0.00 0.00 0.00 4.40
4760 12051 6.485313 CCTGTTGTATAGGTTGTTCTTGTCAA 59.515 38.462 0.00 0.00 0.00 3.18
4764 12055 9.394477 GTTGTATAGGTTGTTCTTGTCAATTTC 57.606 33.333 0.00 0.00 0.00 2.17
4828 12358 8.794406 GTTTACAAACTATGTGTTGTTGAACTG 58.206 33.333 0.00 0.00 43.77 3.16
4897 12427 2.546373 GCAAAGCAAGGCATCAAGTTCA 60.546 45.455 0.00 0.00 0.00 3.18
4906 12436 1.000060 GCATCAAGTTCAAGCTTGCCA 60.000 47.619 21.99 7.82 43.92 4.92
4926 12456 4.878397 GCCAACTGTACAGAAGAATGCTAT 59.122 41.667 29.30 0.00 0.00 2.97
4927 12457 5.355350 GCCAACTGTACAGAAGAATGCTATT 59.645 40.000 29.30 6.07 0.00 1.73
4928 12458 6.676456 GCCAACTGTACAGAAGAATGCTATTG 60.676 42.308 29.30 16.96 0.00 1.90
4929 12459 6.372659 CCAACTGTACAGAAGAATGCTATTGT 59.627 38.462 29.30 0.00 0.00 2.71
4930 12460 7.094634 CCAACTGTACAGAAGAATGCTATTGTT 60.095 37.037 29.30 5.75 0.00 2.83
4931 12461 8.935844 CAACTGTACAGAAGAATGCTATTGTTA 58.064 33.333 29.30 0.00 0.00 2.41
4932 12462 9.672673 AACTGTACAGAAGAATGCTATTGTTAT 57.327 29.630 29.30 0.00 0.00 1.89
4933 12463 9.672673 ACTGTACAGAAGAATGCTATTGTTATT 57.327 29.630 29.30 0.00 0.00 1.40
4959 12489 3.898380 TGCAAAGCAAGGCATCAAG 57.102 47.368 0.00 0.00 34.76 3.02
4960 12490 1.042229 TGCAAAGCAAGGCATCAAGT 58.958 45.000 0.00 0.00 34.76 3.16
4961 12491 1.413445 TGCAAAGCAAGGCATCAAGTT 59.587 42.857 0.00 0.00 34.76 2.66
4962 12492 2.064014 GCAAAGCAAGGCATCAAGTTC 58.936 47.619 0.00 0.00 0.00 3.01
4963 12493 2.546373 GCAAAGCAAGGCATCAAGTTCA 60.546 45.455 0.00 0.00 0.00 3.18
4964 12494 3.719924 CAAAGCAAGGCATCAAGTTCAA 58.280 40.909 0.00 0.00 0.00 2.69
4965 12495 3.655276 AAGCAAGGCATCAAGTTCAAG 57.345 42.857 0.00 0.00 0.00 3.02
4966 12496 2.590821 AGCAAGGCATCAAGTTCAAGT 58.409 42.857 0.00 0.00 0.00 3.16
4967 12497 2.961062 AGCAAGGCATCAAGTTCAAGTT 59.039 40.909 0.00 0.00 0.00 2.66
4968 12498 3.005155 AGCAAGGCATCAAGTTCAAGTTC 59.995 43.478 0.00 0.00 0.00 3.01
4969 12499 3.005155 GCAAGGCATCAAGTTCAAGTTCT 59.995 43.478 0.00 0.00 0.00 3.01
4970 12500 4.216257 GCAAGGCATCAAGTTCAAGTTCTA 59.784 41.667 0.00 0.00 0.00 2.10
4971 12501 5.618640 GCAAGGCATCAAGTTCAAGTTCTAG 60.619 44.000 0.00 0.00 0.00 2.43
4972 12502 4.006319 AGGCATCAAGTTCAAGTTCTAGC 58.994 43.478 0.00 0.00 0.00 3.42
4973 12503 4.006319 GGCATCAAGTTCAAGTTCTAGCT 58.994 43.478 0.00 0.00 0.00 3.32
4974 12504 4.457257 GGCATCAAGTTCAAGTTCTAGCTT 59.543 41.667 0.00 0.00 0.00 3.74
4975 12505 5.643777 GGCATCAAGTTCAAGTTCTAGCTTA 59.356 40.000 0.00 0.00 0.00 3.09
4976 12506 6.149474 GGCATCAAGTTCAAGTTCTAGCTTAA 59.851 38.462 0.00 0.00 0.00 1.85
4977 12507 7.018235 GCATCAAGTTCAAGTTCTAGCTTAAC 58.982 38.462 0.00 0.00 0.00 2.01
4978 12508 6.764877 TCAAGTTCAAGTTCTAGCTTAACG 57.235 37.500 0.00 0.00 32.00 3.18
4979 12509 5.176958 TCAAGTTCAAGTTCTAGCTTAACGC 59.823 40.000 0.00 0.00 39.57 4.84
5077 12607 2.828877 ACCGTTGAAAATCAGACGTCA 58.171 42.857 19.50 0.00 32.85 4.35
5110 12640 6.155565 TCAAACCGAGGGAGTATCTTATTTGA 59.844 38.462 0.00 0.00 33.73 2.69
5124 12654 9.274206 GTATCTTATTTGAAGGACCCTGATAAC 57.726 37.037 0.00 0.00 0.00 1.89
5126 12656 8.618240 TCTTATTTGAAGGACCCTGATAACTA 57.382 34.615 0.00 0.00 0.00 2.24
5128 12658 5.431179 TTTGAAGGACCCTGATAACTACC 57.569 43.478 0.00 0.00 0.00 3.18
5130 12660 4.631234 TGAAGGACCCTGATAACTACCAT 58.369 43.478 0.00 0.00 0.00 3.55
5132 12662 6.390504 TGAAGGACCCTGATAACTACCATAT 58.609 40.000 0.00 0.00 0.00 1.78
5141 12671 5.364778 TGATAACTACCATATGTGTGGCAC 58.635 41.667 11.55 11.55 43.27 5.01
5146 12676 0.378257 CCATATGTGTGGCACGAAGC 59.622 55.000 13.77 3.88 44.65 3.86
5159 12689 2.489751 GAAGCAATTTCGCCCCGG 59.510 61.111 0.00 0.00 0.00 5.73
5222 12752 7.100458 ACTTTAGTTGTGAAGCATTTCAACT 57.900 32.000 16.78 16.78 46.58 3.16
5226 12756 6.651755 AGTTGTGAAGCATTTCAACTTTTG 57.348 33.333 10.13 0.00 44.54 2.44
5227 12757 6.165577 AGTTGTGAAGCATTTCAACTTTTGT 58.834 32.000 10.13 0.00 44.54 2.83
5231 12761 6.128607 TGTGAAGCATTTCAACTTTTGTGTTG 60.129 34.615 0.00 0.00 44.49 3.33
5233 12763 7.062839 GTGAAGCATTTCAACTTTTGTGTTGTA 59.937 33.333 7.17 0.00 44.49 2.41
5234 12764 7.275341 TGAAGCATTTCAACTTTTGTGTTGTAG 59.725 33.333 7.17 0.00 45.26 2.74
5246 12776 4.829064 TGTGTTGTAGATGGCAAGTTTC 57.171 40.909 0.00 0.00 0.00 2.78
5252 12782 5.689383 TGTAGATGGCAAGTTTCAGTTTC 57.311 39.130 0.00 0.00 0.00 2.78
5256 12786 6.225981 AGATGGCAAGTTTCAGTTTCTTTT 57.774 33.333 0.00 0.00 0.00 2.27
5257 12787 6.643388 AGATGGCAAGTTTCAGTTTCTTTTT 58.357 32.000 0.00 0.00 0.00 1.94
5289 12819 5.975693 TTTTCGGATGGCAATTTTAGAGT 57.024 34.783 0.00 0.00 0.00 3.24
5290 12820 5.975693 TTTCGGATGGCAATTTTAGAGTT 57.024 34.783 0.00 0.00 0.00 3.01
5291 12821 7.455641 TTTTCGGATGGCAATTTTAGAGTTA 57.544 32.000 0.00 0.00 0.00 2.24
5292 12822 6.677781 TTCGGATGGCAATTTTAGAGTTAG 57.322 37.500 0.00 0.00 0.00 2.34
5293 12823 5.984725 TCGGATGGCAATTTTAGAGTTAGA 58.015 37.500 0.00 0.00 0.00 2.10
5294 12824 6.049149 TCGGATGGCAATTTTAGAGTTAGAG 58.951 40.000 0.00 0.00 0.00 2.43
5295 12825 5.237344 CGGATGGCAATTTTAGAGTTAGAGG 59.763 44.000 0.00 0.00 0.00 3.69
5296 12826 6.357367 GGATGGCAATTTTAGAGTTAGAGGA 58.643 40.000 0.00 0.00 0.00 3.71
5297 12827 7.001073 GGATGGCAATTTTAGAGTTAGAGGAT 58.999 38.462 0.00 0.00 0.00 3.24
5298 12828 7.040823 GGATGGCAATTTTAGAGTTAGAGGATG 60.041 40.741 0.00 0.00 0.00 3.51
5299 12829 6.122277 TGGCAATTTTAGAGTTAGAGGATGG 58.878 40.000 0.00 0.00 0.00 3.51
5300 12830 5.532779 GGCAATTTTAGAGTTAGAGGATGGG 59.467 44.000 0.00 0.00 0.00 4.00
5301 12831 6.357367 GCAATTTTAGAGTTAGAGGATGGGA 58.643 40.000 0.00 0.00 0.00 4.37
5302 12832 6.828785 GCAATTTTAGAGTTAGAGGATGGGAA 59.171 38.462 0.00 0.00 0.00 3.97
5303 12833 7.503902 GCAATTTTAGAGTTAGAGGATGGGAAT 59.496 37.037 0.00 0.00 0.00 3.01
5304 12834 9.413734 CAATTTTAGAGTTAGAGGATGGGAATT 57.586 33.333 0.00 0.00 0.00 2.17
5310 12840 8.986929 AGAGTTAGAGGATGGGAATTAAAATG 57.013 34.615 0.00 0.00 0.00 2.32
5311 12841 8.001292 AGAGTTAGAGGATGGGAATTAAAATGG 58.999 37.037 0.00 0.00 0.00 3.16
5312 12842 7.652554 AGTTAGAGGATGGGAATTAAAATGGT 58.347 34.615 0.00 0.00 0.00 3.55
5313 12843 8.787818 AGTTAGAGGATGGGAATTAAAATGGTA 58.212 33.333 0.00 0.00 0.00 3.25
5314 12844 8.847196 GTTAGAGGATGGGAATTAAAATGGTAC 58.153 37.037 0.00 0.00 0.00 3.34
5315 12845 6.062095 AGAGGATGGGAATTAAAATGGTACG 58.938 40.000 0.00 0.00 0.00 3.67
5316 12846 6.008696 AGGATGGGAATTAAAATGGTACGA 57.991 37.500 0.00 0.00 0.00 3.43
5317 12847 6.062095 AGGATGGGAATTAAAATGGTACGAG 58.938 40.000 0.00 0.00 0.00 4.18
5318 12848 6.059484 GGATGGGAATTAAAATGGTACGAGA 58.941 40.000 0.00 0.00 0.00 4.04
5319 12849 6.017357 GGATGGGAATTAAAATGGTACGAGAC 60.017 42.308 0.00 0.00 0.00 3.36
5320 12850 6.057321 TGGGAATTAAAATGGTACGAGACT 57.943 37.500 0.00 0.00 0.00 3.24
5321 12851 6.478129 TGGGAATTAAAATGGTACGAGACTT 58.522 36.000 0.00 0.00 0.00 3.01
5322 12852 6.596497 TGGGAATTAAAATGGTACGAGACTTC 59.404 38.462 0.00 0.00 0.00 3.01
5323 12853 6.596497 GGGAATTAAAATGGTACGAGACTTCA 59.404 38.462 0.00 0.00 0.00 3.02
5324 12854 7.120138 GGGAATTAAAATGGTACGAGACTTCAA 59.880 37.037 0.00 0.00 0.00 2.69
5325 12855 8.508875 GGAATTAAAATGGTACGAGACTTCAAA 58.491 33.333 0.00 0.00 0.00 2.69
5328 12858 8.842358 TTAAAATGGTACGAGACTTCAAATCT 57.158 30.769 0.00 0.00 0.00 2.40
5329 12859 9.932207 TTAAAATGGTACGAGACTTCAAATCTA 57.068 29.630 0.00 0.00 0.00 1.98
5331 12861 9.449719 AAAATGGTACGAGACTTCAAATCTATT 57.550 29.630 0.00 0.00 0.00 1.73
5332 12862 8.425577 AATGGTACGAGACTTCAAATCTATTG 57.574 34.615 0.00 0.00 0.00 1.90
5333 12863 6.931838 TGGTACGAGACTTCAAATCTATTGT 58.068 36.000 0.00 0.00 0.00 2.71
5334 12864 7.383687 TGGTACGAGACTTCAAATCTATTGTT 58.616 34.615 0.00 0.00 0.00 2.83
5335 12865 7.876068 TGGTACGAGACTTCAAATCTATTGTTT 59.124 33.333 0.00 0.00 0.00 2.83
5336 12866 8.169268 GGTACGAGACTTCAAATCTATTGTTTG 58.831 37.037 0.00 0.00 37.79 2.93
5337 12867 7.133891 ACGAGACTTCAAATCTATTGTTTGG 57.866 36.000 0.00 0.00 37.22 3.28
5338 12868 6.710744 ACGAGACTTCAAATCTATTGTTTGGT 59.289 34.615 0.00 0.00 37.22 3.67
5339 12869 7.228706 ACGAGACTTCAAATCTATTGTTTGGTT 59.771 33.333 0.00 0.00 37.22 3.67
5340 12870 8.717821 CGAGACTTCAAATCTATTGTTTGGTTA 58.282 33.333 0.00 0.00 37.22 2.85
5342 12872 9.014297 AGACTTCAAATCTATTGTTTGGTTAGG 57.986 33.333 0.00 0.00 37.22 2.69
5343 12873 8.122472 ACTTCAAATCTATTGTTTGGTTAGGG 57.878 34.615 0.00 0.00 37.22 3.53
5344 12874 7.178451 ACTTCAAATCTATTGTTTGGTTAGGGG 59.822 37.037 0.00 0.00 37.22 4.79
5345 12875 6.795590 TCAAATCTATTGTTTGGTTAGGGGA 58.204 36.000 0.00 0.00 37.22 4.81
5346 12876 7.418378 TCAAATCTATTGTTTGGTTAGGGGAT 58.582 34.615 0.00 0.00 37.22 3.85
5347 12877 8.561769 TCAAATCTATTGTTTGGTTAGGGGATA 58.438 33.333 0.00 0.00 37.22 2.59
5348 12878 8.850156 CAAATCTATTGTTTGGTTAGGGGATAG 58.150 37.037 0.00 0.00 33.91 2.08
5349 12879 6.509523 TCTATTGTTTGGTTAGGGGATAGG 57.490 41.667 0.00 0.00 0.00 2.57
5350 12880 6.214278 TCTATTGTTTGGTTAGGGGATAGGA 58.786 40.000 0.00 0.00 0.00 2.94
5351 12881 5.806955 ATTGTTTGGTTAGGGGATAGGAA 57.193 39.130 0.00 0.00 0.00 3.36
5352 12882 5.602291 TTGTTTGGTTAGGGGATAGGAAA 57.398 39.130 0.00 0.00 0.00 3.13
5353 12883 5.806955 TGTTTGGTTAGGGGATAGGAAAT 57.193 39.130 0.00 0.00 0.00 2.17
5354 12884 6.160483 TGTTTGGTTAGGGGATAGGAAATT 57.840 37.500 0.00 0.00 0.00 1.82
5355 12885 6.566914 TGTTTGGTTAGGGGATAGGAAATTT 58.433 36.000 0.00 0.00 0.00 1.82
5356 12886 7.710579 TGTTTGGTTAGGGGATAGGAAATTTA 58.289 34.615 0.00 0.00 0.00 1.40
5357 12887 8.348354 TGTTTGGTTAGGGGATAGGAAATTTAT 58.652 33.333 0.00 0.00 0.00 1.40
5358 12888 9.871175 GTTTGGTTAGGGGATAGGAAATTTATA 57.129 33.333 0.00 0.00 0.00 0.98
5362 12892 9.529823 GGTTAGGGGATAGGAAATTTATAAAGG 57.470 37.037 3.94 0.00 0.00 3.11
5372 12902 8.166422 AGGAAATTTATAAAGGAATAGGCACG 57.834 34.615 3.94 0.00 0.00 5.34
5373 12903 7.778382 AGGAAATTTATAAAGGAATAGGCACGT 59.222 33.333 3.94 0.00 0.00 4.49
5374 12904 7.860872 GGAAATTTATAAAGGAATAGGCACGTG 59.139 37.037 12.28 12.28 0.00 4.49
5375 12905 8.514330 AAATTTATAAAGGAATAGGCACGTGA 57.486 30.769 22.23 0.00 0.00 4.35
5376 12906 6.913873 TTTATAAAGGAATAGGCACGTGAC 57.086 37.500 22.23 18.98 0.00 3.67
5377 12907 4.755266 ATAAAGGAATAGGCACGTGACT 57.245 40.909 29.84 29.84 37.13 3.41
5378 12908 3.418684 AAAGGAATAGGCACGTGACTT 57.581 42.857 32.25 13.41 33.72 3.01
5379 12909 4.546829 AAAGGAATAGGCACGTGACTTA 57.453 40.909 32.25 15.93 33.72 2.24
5380 12910 4.546829 AAGGAATAGGCACGTGACTTAA 57.453 40.909 32.25 13.81 33.72 1.85
5381 12911 4.124851 AGGAATAGGCACGTGACTTAAG 57.875 45.455 32.25 0.00 33.72 1.85
5382 12912 3.767673 AGGAATAGGCACGTGACTTAAGA 59.232 43.478 32.25 12.45 33.72 2.10
5383 12913 3.864003 GGAATAGGCACGTGACTTAAGAC 59.136 47.826 32.25 16.03 33.72 3.01
5384 12914 4.381718 GGAATAGGCACGTGACTTAAGACT 60.382 45.833 32.25 5.62 33.72 3.24
5385 12915 4.803098 ATAGGCACGTGACTTAAGACTT 57.197 40.909 32.25 4.73 33.72 3.01
5386 12916 3.470645 AGGCACGTGACTTAAGACTTT 57.529 42.857 20.95 0.00 0.00 2.66
5387 12917 4.595762 AGGCACGTGACTTAAGACTTTA 57.404 40.909 20.95 0.00 0.00 1.85
5388 12918 4.952460 AGGCACGTGACTTAAGACTTTAA 58.048 39.130 20.95 0.00 0.00 1.52
5389 12919 4.748600 AGGCACGTGACTTAAGACTTTAAC 59.251 41.667 20.95 0.00 0.00 2.01
5390 12920 4.748600 GGCACGTGACTTAAGACTTTAACT 59.251 41.667 22.23 0.00 0.00 2.24
5391 12921 5.107568 GGCACGTGACTTAAGACTTTAACTC 60.108 44.000 22.23 0.00 0.00 3.01
5392 12922 5.107568 GCACGTGACTTAAGACTTTAACTCC 60.108 44.000 22.23 0.00 0.00 3.85
5393 12923 5.404667 CACGTGACTTAAGACTTTAACTCCC 59.595 44.000 10.90 0.00 0.00 4.30
5394 12924 5.069516 ACGTGACTTAAGACTTTAACTCCCA 59.930 40.000 10.09 0.00 0.00 4.37
5395 12925 6.164176 CGTGACTTAAGACTTTAACTCCCAT 58.836 40.000 10.09 0.00 0.00 4.00
5396 12926 6.310711 CGTGACTTAAGACTTTAACTCCCATC 59.689 42.308 10.09 0.00 0.00 3.51
5397 12927 6.310711 GTGACTTAAGACTTTAACTCCCATCG 59.689 42.308 10.09 0.00 0.00 3.84
5398 12928 6.014840 TGACTTAAGACTTTAACTCCCATCGT 60.015 38.462 10.09 0.00 0.00 3.73
5399 12929 6.766429 ACTTAAGACTTTAACTCCCATCGTT 58.234 36.000 10.09 0.00 0.00 3.85
5400 12930 7.222161 ACTTAAGACTTTAACTCCCATCGTTT 58.778 34.615 10.09 0.00 0.00 3.60
5401 12931 7.718314 ACTTAAGACTTTAACTCCCATCGTTTT 59.282 33.333 10.09 0.00 0.00 2.43
5402 12932 9.211485 CTTAAGACTTTAACTCCCATCGTTTTA 57.789 33.333 0.00 0.00 0.00 1.52
5403 12933 9.729281 TTAAGACTTTAACTCCCATCGTTTTAT 57.271 29.630 0.00 0.00 0.00 1.40
5404 12934 8.631480 AAGACTTTAACTCCCATCGTTTTATT 57.369 30.769 0.00 0.00 0.00 1.40
5405 12935 9.729281 AAGACTTTAACTCCCATCGTTTTATTA 57.271 29.630 0.00 0.00 0.00 0.98
5406 12936 9.729281 AGACTTTAACTCCCATCGTTTTATTAA 57.271 29.630 0.00 0.00 0.00 1.40
5407 12937 9.764870 GACTTTAACTCCCATCGTTTTATTAAC 57.235 33.333 0.00 0.00 0.00 2.01
5408 12938 9.287373 ACTTTAACTCCCATCGTTTTATTAACA 57.713 29.630 0.00 0.00 0.00 2.41
5411 12941 6.753107 ACTCCCATCGTTTTATTAACAAGG 57.247 37.500 0.00 0.00 0.00 3.61
5412 12942 6.478129 ACTCCCATCGTTTTATTAACAAGGA 58.522 36.000 0.00 0.00 0.00 3.36
5413 12943 6.943718 ACTCCCATCGTTTTATTAACAAGGAA 59.056 34.615 0.00 0.00 0.00 3.36
5414 12944 7.614192 ACTCCCATCGTTTTATTAACAAGGAAT 59.386 33.333 0.00 0.00 0.00 3.01
5415 12945 8.356000 TCCCATCGTTTTATTAACAAGGAATT 57.644 30.769 0.00 0.00 0.00 2.17
5416 12946 8.247562 TCCCATCGTTTTATTAACAAGGAATTG 58.752 33.333 0.00 0.00 0.00 2.32
5417 12947 8.032451 CCCATCGTTTTATTAACAAGGAATTGT 58.968 33.333 0.00 0.00 36.59 2.71
5418 12948 9.418045 CCATCGTTTTATTAACAAGGAATTGTT 57.582 29.630 10.81 10.81 45.94 2.83
5447 12977 9.927081 AATGAGTTAATCTTAACCCTTCATCAT 57.073 29.630 12.59 9.82 43.03 2.45
5468 12998 9.664332 CATCATAACTTATATTCTCTTCCCTGG 57.336 37.037 0.00 0.00 0.00 4.45
5469 12999 8.798975 TCATAACTTATATTCTCTTCCCTGGT 57.201 34.615 0.00 0.00 0.00 4.00
5470 13000 8.871125 TCATAACTTATATTCTCTTCCCTGGTC 58.129 37.037 0.00 0.00 0.00 4.02
5471 13001 8.875168 CATAACTTATATTCTCTTCCCTGGTCT 58.125 37.037 0.00 0.00 0.00 3.85
5473 13003 8.485578 AACTTATATTCTCTTCCCTGGTCTAG 57.514 38.462 0.00 0.00 0.00 2.43
5474 13004 7.597327 ACTTATATTCTCTTCCCTGGTCTAGT 58.403 38.462 0.00 0.00 0.00 2.57
5475 13005 7.726738 ACTTATATTCTCTTCCCTGGTCTAGTC 59.273 40.741 0.00 0.00 0.00 2.59
5476 13006 2.830651 TCTCTTCCCTGGTCTAGTCC 57.169 55.000 0.00 0.00 0.00 3.85
5477 13007 1.288335 TCTCTTCCCTGGTCTAGTCCC 59.712 57.143 3.42 0.00 0.00 4.46
5478 13008 1.289530 CTCTTCCCTGGTCTAGTCCCT 59.710 57.143 3.42 0.00 0.00 4.20
5479 13009 1.288335 TCTTCCCTGGTCTAGTCCCTC 59.712 57.143 3.42 0.00 0.00 4.30
5480 13010 0.033405 TTCCCTGGTCTAGTCCCTCG 60.033 60.000 3.42 0.00 0.00 4.63
5481 13011 1.212934 TCCCTGGTCTAGTCCCTCGT 61.213 60.000 3.42 0.00 0.00 4.18
5482 13012 0.752376 CCCTGGTCTAGTCCCTCGTC 60.752 65.000 3.42 0.00 0.00 4.20
5483 13013 0.034380 CCTGGTCTAGTCCCTCGTCA 60.034 60.000 3.42 0.00 0.00 4.35
5484 13014 1.616187 CCTGGTCTAGTCCCTCGTCAA 60.616 57.143 3.42 0.00 0.00 3.18
5485 13015 1.473278 CTGGTCTAGTCCCTCGTCAAC 59.527 57.143 3.42 0.00 0.00 3.18
5486 13016 0.816373 GGTCTAGTCCCTCGTCAACC 59.184 60.000 0.00 0.00 0.00 3.77
5487 13017 1.542492 GTCTAGTCCCTCGTCAACCA 58.458 55.000 0.00 0.00 0.00 3.67
5488 13018 1.891150 GTCTAGTCCCTCGTCAACCAA 59.109 52.381 0.00 0.00 0.00 3.67
5489 13019 2.298163 GTCTAGTCCCTCGTCAACCAAA 59.702 50.000 0.00 0.00 0.00 3.28
5490 13020 2.298163 TCTAGTCCCTCGTCAACCAAAC 59.702 50.000 0.00 0.00 0.00 2.93
5491 13021 0.834612 AGTCCCTCGTCAACCAAACA 59.165 50.000 0.00 0.00 0.00 2.83
5492 13022 1.210967 AGTCCCTCGTCAACCAAACAA 59.789 47.619 0.00 0.00 0.00 2.83
5493 13023 1.602377 GTCCCTCGTCAACCAAACAAG 59.398 52.381 0.00 0.00 0.00 3.16
5494 13024 1.487142 TCCCTCGTCAACCAAACAAGA 59.513 47.619 0.00 0.00 0.00 3.02
5495 13025 2.092861 TCCCTCGTCAACCAAACAAGAA 60.093 45.455 0.00 0.00 0.00 2.52
5496 13026 2.685897 CCCTCGTCAACCAAACAAGAAA 59.314 45.455 0.00 0.00 0.00 2.52
5497 13027 3.129638 CCCTCGTCAACCAAACAAGAAAA 59.870 43.478 0.00 0.00 0.00 2.29
5498 13028 4.202111 CCCTCGTCAACCAAACAAGAAAAT 60.202 41.667 0.00 0.00 0.00 1.82
5499 13029 5.009210 CCCTCGTCAACCAAACAAGAAAATA 59.991 40.000 0.00 0.00 0.00 1.40
5500 13030 5.912955 CCTCGTCAACCAAACAAGAAAATAC 59.087 40.000 0.00 0.00 0.00 1.89
5501 13031 6.438259 TCGTCAACCAAACAAGAAAATACA 57.562 33.333 0.00 0.00 0.00 2.29
5502 13032 6.853720 TCGTCAACCAAACAAGAAAATACAA 58.146 32.000 0.00 0.00 0.00 2.41
5503 13033 7.313646 TCGTCAACCAAACAAGAAAATACAAA 58.686 30.769 0.00 0.00 0.00 2.83
5504 13034 7.976734 TCGTCAACCAAACAAGAAAATACAAAT 59.023 29.630 0.00 0.00 0.00 2.32
5505 13035 8.599774 CGTCAACCAAACAAGAAAATACAAATT 58.400 29.630 0.00 0.00 0.00 1.82
5506 13036 9.914923 GTCAACCAAACAAGAAAATACAAATTC 57.085 29.630 0.00 0.00 0.00 2.17
5507 13037 9.883142 TCAACCAAACAAGAAAATACAAATTCT 57.117 25.926 0.00 0.00 37.49 2.40
5541 13071 9.585099 TTTCAAACATAATTCTTATCATGTGCC 57.415 29.630 0.00 0.00 32.15 5.01
5542 13072 8.291191 TCAAACATAATTCTTATCATGTGCCA 57.709 30.769 0.00 0.00 32.15 4.92
5543 13073 8.407832 TCAAACATAATTCTTATCATGTGCCAG 58.592 33.333 0.00 0.00 32.15 4.85
5544 13074 6.889301 ACATAATTCTTATCATGTGCCAGG 57.111 37.500 0.00 0.00 30.64 4.45
5545 13075 5.771666 ACATAATTCTTATCATGTGCCAGGG 59.228 40.000 0.00 0.00 30.64 4.45
5546 13076 4.524802 AATTCTTATCATGTGCCAGGGA 57.475 40.909 0.00 0.00 0.00 4.20
5547 13077 4.736611 ATTCTTATCATGTGCCAGGGAT 57.263 40.909 0.00 0.00 0.00 3.85
5548 13078 4.524802 TTCTTATCATGTGCCAGGGATT 57.475 40.909 0.00 0.00 0.00 3.01
5549 13079 5.645056 TTCTTATCATGTGCCAGGGATTA 57.355 39.130 0.00 0.00 0.00 1.75
5550 13080 5.233083 TCTTATCATGTGCCAGGGATTAG 57.767 43.478 0.00 0.00 0.00 1.73
5551 13081 2.965671 ATCATGTGCCAGGGATTAGG 57.034 50.000 0.00 0.00 0.00 2.69
5552 13082 0.846015 TCATGTGCCAGGGATTAGGG 59.154 55.000 0.00 0.00 0.00 3.53
5553 13083 0.846015 CATGTGCCAGGGATTAGGGA 59.154 55.000 0.00 0.00 0.00 4.20
5554 13084 1.426598 CATGTGCCAGGGATTAGGGAT 59.573 52.381 0.00 0.00 0.00 3.85
5555 13085 2.505672 TGTGCCAGGGATTAGGGATA 57.494 50.000 0.00 0.00 0.00 2.59
5556 13086 2.782922 TGTGCCAGGGATTAGGGATAA 58.217 47.619 0.00 0.00 0.00 1.75
5557 13087 3.127250 TGTGCCAGGGATTAGGGATAAA 58.873 45.455 0.00 0.00 0.00 1.40
5558 13088 3.529734 TGTGCCAGGGATTAGGGATAAAA 59.470 43.478 0.00 0.00 0.00 1.52
5559 13089 4.169856 TGTGCCAGGGATTAGGGATAAAAT 59.830 41.667 0.00 0.00 0.00 1.82
5560 13090 4.524328 GTGCCAGGGATTAGGGATAAAATG 59.476 45.833 0.00 0.00 0.00 2.32
5561 13091 4.418526 TGCCAGGGATTAGGGATAAAATGA 59.581 41.667 0.00 0.00 0.00 2.57
5562 13092 4.767409 GCCAGGGATTAGGGATAAAATGAC 59.233 45.833 0.00 0.00 0.00 3.06
5563 13093 5.458215 GCCAGGGATTAGGGATAAAATGACT 60.458 44.000 0.00 0.00 0.00 3.41
5564 13094 6.241645 CCAGGGATTAGGGATAAAATGACTC 58.758 44.000 0.00 0.00 0.00 3.36
5565 13095 6.183361 CCAGGGATTAGGGATAAAATGACTCA 60.183 42.308 0.00 0.00 0.00 3.41
5566 13096 7.465116 CAGGGATTAGGGATAAAATGACTCAT 58.535 38.462 0.00 0.00 0.00 2.90
5567 13097 7.609532 CAGGGATTAGGGATAAAATGACTCATC 59.390 40.741 0.00 0.00 0.00 2.92
5568 13098 6.887002 GGGATTAGGGATAAAATGACTCATCC 59.113 42.308 0.00 0.00 36.92 3.51
5574 13104 6.566197 GGATAAAATGACTCATCCCATGTC 57.434 41.667 0.00 0.00 32.38 3.06
5575 13105 6.302269 GGATAAAATGACTCATCCCATGTCT 58.698 40.000 0.00 0.00 32.38 3.41
5576 13106 7.453393 GGATAAAATGACTCATCCCATGTCTA 58.547 38.462 0.00 0.00 32.38 2.59
5577 13107 7.939039 GGATAAAATGACTCATCCCATGTCTAA 59.061 37.037 0.00 0.00 32.38 2.10
5578 13108 9.512588 GATAAAATGACTCATCCCATGTCTAAT 57.487 33.333 0.00 0.00 0.00 1.73
5579 13109 7.814264 AAAATGACTCATCCCATGTCTAATC 57.186 36.000 0.00 0.00 0.00 1.75
5580 13110 6.760440 AATGACTCATCCCATGTCTAATCT 57.240 37.500 0.00 0.00 0.00 2.40
5581 13111 5.798125 TGACTCATCCCATGTCTAATCTC 57.202 43.478 0.00 0.00 0.00 2.75
5582 13112 5.211201 TGACTCATCCCATGTCTAATCTCA 58.789 41.667 0.00 0.00 0.00 3.27
5583 13113 5.662657 TGACTCATCCCATGTCTAATCTCAA 59.337 40.000 0.00 0.00 0.00 3.02
5584 13114 6.328410 TGACTCATCCCATGTCTAATCTCAAT 59.672 38.462 0.00 0.00 0.00 2.57
5585 13115 7.510343 TGACTCATCCCATGTCTAATCTCAATA 59.490 37.037 0.00 0.00 0.00 1.90
5586 13116 7.675062 ACTCATCCCATGTCTAATCTCAATAC 58.325 38.462 0.00 0.00 0.00 1.89
5587 13117 7.290948 ACTCATCCCATGTCTAATCTCAATACA 59.709 37.037 0.00 0.00 0.00 2.29
5588 13118 8.033178 TCATCCCATGTCTAATCTCAATACAA 57.967 34.615 0.00 0.00 0.00 2.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
131 133 2.334838 GAGTACGTTTGATTCTGCCGT 58.665 47.619 0.00 0.00 35.68 5.68
132 134 1.659098 GGAGTACGTTTGATTCTGCCG 59.341 52.381 0.00 0.00 0.00 5.69
146 148 4.483311 CCTACAACTTCTTCACGGAGTAC 58.517 47.826 0.00 0.00 41.61 2.73
160 162 5.905331 TCCATATCATGTTCTCCCTACAACT 59.095 40.000 0.00 0.00 0.00 3.16
175 177 5.638433 GCTACCCCTATCCTCTCCATATCAT 60.638 48.000 0.00 0.00 0.00 2.45
209 211 2.031560 TGTCATGCGTGTTTGTCAGAAC 59.968 45.455 5.68 0.00 0.00 3.01
213 215 0.660488 GGTGTCATGCGTGTTTGTCA 59.340 50.000 5.68 0.00 0.00 3.58
237 239 1.885850 GTTGTCGACACCAACCGCT 60.886 57.895 19.90 0.00 36.94 5.52
255 257 2.507058 TGGGATGAATCAGAAGTCCCTG 59.493 50.000 17.67 0.00 46.97 4.45
267 269 1.133575 CCTGCAGGATGTGGGATGAAT 60.134 52.381 29.88 0.00 39.31 2.57
280 282 2.028294 CAGGCTATCACTATCCTGCAGG 60.028 54.545 27.87 27.87 39.53 4.85
293 1708 3.438297 TCGCTTCAGTTACAGGCTATC 57.562 47.619 0.00 0.00 0.00 2.08
333 1748 9.020731 TCATACTCTGACAACAGTTTGATACTA 57.979 33.333 0.00 0.00 43.81 1.82
350 1765 7.831753 TCTTTCTTCAGGTAAGTCATACTCTG 58.168 38.462 0.00 0.00 36.51 3.35
353 1768 8.602472 ATCTCTTTCTTCAGGTAAGTCATACT 57.398 34.615 0.00 0.00 36.51 2.12
413 1828 0.744874 CTCGGTGGAAAGGAGCGATA 59.255 55.000 0.00 0.00 42.00 2.92
422 1837 2.119484 ATTGGTCGCCTCGGTGGAAA 62.119 55.000 0.00 0.00 38.35 3.13
435 1850 1.260544 AGCAAGGCTCCAAATTGGTC 58.739 50.000 12.28 5.30 39.03 4.02
448 1863 1.118356 ATAGAGGCGAGGGAGCAAGG 61.118 60.000 0.00 0.00 39.27 3.61
484 1899 1.933765 AGAGGATCCTACAGGTGGACT 59.066 52.381 16.16 0.52 36.30 3.85
512 1927 5.705441 GGTACATGATTGTCAAACTTCTGGA 59.295 40.000 0.00 0.00 37.28 3.86
532 1947 1.822506 GCTCAAAGGAAGGTGGGTAC 58.177 55.000 0.00 0.00 0.00 3.34
569 1985 7.928706 TGGAACATTTACCAAATTTTCGTTCAT 59.071 29.630 0.00 0.00 38.06 2.57
570 1986 7.265673 TGGAACATTTACCAAATTTTCGTTCA 58.734 30.769 0.00 2.06 38.06 3.18
576 1992 7.278875 TCAAGCTGGAACATTTACCAAATTTT 58.721 30.769 0.00 0.00 38.20 1.82
595 2011 0.976641 TCAGGTCGTTCCATCAAGCT 59.023 50.000 2.77 0.00 39.02 3.74
599 2015 2.567169 ACAGAATCAGGTCGTTCCATCA 59.433 45.455 2.77 0.00 39.02 3.07
619 2035 9.556030 CTGTTTTCTTTAATCCCGAATTTAGAC 57.444 33.333 0.00 0.00 0.00 2.59
628 2044 6.017440 TGTGAGTTCTGTTTTCTTTAATCCCG 60.017 38.462 0.00 0.00 0.00 5.14
643 2059 4.346129 GCAAAGAGTTGTTGTGAGTTCTG 58.654 43.478 0.00 0.00 37.06 3.02
665 2081 5.186198 ACATTCTTAAGAAGTTGATCCCCG 58.814 41.667 21.75 4.45 37.48 5.73
666 2082 8.047310 TCTTACATTCTTAAGAAGTTGATCCCC 58.953 37.037 21.75 0.00 35.55 4.81
667 2083 9.620259 ATCTTACATTCTTAAGAAGTTGATCCC 57.380 33.333 21.75 0.00 40.62 3.85
671 2087 9.923143 TCGAATCTTACATTCTTAAGAAGTTGA 57.077 29.630 21.75 18.03 40.62 3.18
682 2098 9.968870 GTACCTCTTATTCGAATCTTACATTCT 57.031 33.333 15.25 0.00 0.00 2.40
683 2099 9.745880 TGTACCTCTTATTCGAATCTTACATTC 57.254 33.333 15.25 2.53 0.00 2.67
688 2104 9.760077 GGAAATGTACCTCTTATTCGAATCTTA 57.240 33.333 15.25 0.66 0.00 2.10
689 2105 8.487028 AGGAAATGTACCTCTTATTCGAATCTT 58.513 33.333 15.25 0.00 31.43 2.40
690 2106 8.024145 AGGAAATGTACCTCTTATTCGAATCT 57.976 34.615 15.25 0.00 31.43 2.40
703 2119 3.222394 AGGGGAAGAGGAAATGTACCT 57.778 47.619 0.00 0.00 40.80 3.08
704 2120 4.317530 AAAGGGGAAGAGGAAATGTACC 57.682 45.455 0.00 0.00 0.00 3.34
705 2121 9.067986 CAATATAAAGGGGAAGAGGAAATGTAC 57.932 37.037 0.00 0.00 0.00 2.90
706 2122 9.009675 TCAATATAAAGGGGAAGAGGAAATGTA 57.990 33.333 0.00 0.00 0.00 2.29
707 2123 7.780271 GTCAATATAAAGGGGAAGAGGAAATGT 59.220 37.037 0.00 0.00 0.00 2.71
708 2124 7.041098 CGTCAATATAAAGGGGAAGAGGAAATG 60.041 40.741 0.00 0.00 0.00 2.32
709 2125 6.998673 CGTCAATATAAAGGGGAAGAGGAAAT 59.001 38.462 0.00 0.00 0.00 2.17
710 2126 6.354130 CGTCAATATAAAGGGGAAGAGGAAA 58.646 40.000 0.00 0.00 0.00 3.13
711 2127 5.163237 CCGTCAATATAAAGGGGAAGAGGAA 60.163 44.000 0.00 0.00 0.00 3.36
712 2128 4.347000 CCGTCAATATAAAGGGGAAGAGGA 59.653 45.833 0.00 0.00 0.00 3.71
713 2129 4.347000 TCCGTCAATATAAAGGGGAAGAGG 59.653 45.833 0.00 0.00 0.00 3.69
714 2130 5.546621 TCCGTCAATATAAAGGGGAAGAG 57.453 43.478 0.00 0.00 0.00 2.85
715 2131 7.808279 ATATCCGTCAATATAAAGGGGAAGA 57.192 36.000 0.00 0.00 0.00 2.87
716 2132 8.863872 AAATATCCGTCAATATAAAGGGGAAG 57.136 34.615 0.00 0.00 0.00 3.46
725 2141 9.496873 CCCACAGTTTAAATATCCGTCAATATA 57.503 33.333 0.00 0.00 0.00 0.86
726 2142 7.447238 CCCCACAGTTTAAATATCCGTCAATAT 59.553 37.037 0.00 0.00 0.00 1.28
727 2143 6.768861 CCCCACAGTTTAAATATCCGTCAATA 59.231 38.462 0.00 0.00 0.00 1.90
728 2144 5.592688 CCCCACAGTTTAAATATCCGTCAAT 59.407 40.000 0.00 0.00 0.00 2.57
729 2145 4.944930 CCCCACAGTTTAAATATCCGTCAA 59.055 41.667 0.00 0.00 0.00 3.18
730 2146 4.225492 TCCCCACAGTTTAAATATCCGTCA 59.775 41.667 0.00 0.00 0.00 4.35
731 2147 4.773013 TCCCCACAGTTTAAATATCCGTC 58.227 43.478 0.00 0.00 0.00 4.79
732 2148 4.847990 TCCCCACAGTTTAAATATCCGT 57.152 40.909 0.00 0.00 0.00 4.69
733 2149 6.709018 AATTCCCCACAGTTTAAATATCCG 57.291 37.500 0.00 0.00 0.00 4.18
734 2150 8.638873 CCTAAATTCCCCACAGTTTAAATATCC 58.361 37.037 0.00 0.00 0.00 2.59
735 2151 9.416284 TCCTAAATTCCCCACAGTTTAAATATC 57.584 33.333 0.00 0.00 0.00 1.63
736 2152 9.777008 TTCCTAAATTCCCCACAGTTTAAATAT 57.223 29.630 0.00 0.00 0.00 1.28
737 2153 9.603189 TTTCCTAAATTCCCCACAGTTTAAATA 57.397 29.630 0.00 0.00 0.00 1.40
738 2154 8.499288 TTTCCTAAATTCCCCACAGTTTAAAT 57.501 30.769 0.00 0.00 0.00 1.40
739 2155 7.916077 TTTCCTAAATTCCCCACAGTTTAAA 57.084 32.000 0.00 0.00 0.00 1.52
740 2156 8.499288 AATTTCCTAAATTCCCCACAGTTTAA 57.501 30.769 0.00 0.00 36.38 1.52
741 2157 8.129496 GAATTTCCTAAATTCCCCACAGTTTA 57.871 34.615 12.14 0.00 46.98 2.01
742 2158 7.004555 GAATTTCCTAAATTCCCCACAGTTT 57.995 36.000 12.14 0.00 46.98 2.66
743 2159 6.605471 GAATTTCCTAAATTCCCCACAGTT 57.395 37.500 12.14 0.00 46.98 3.16
753 2169 6.183360 GCAACCTCTAGCGAATTTCCTAAATT 60.183 38.462 0.00 0.00 43.43 1.82
754 2170 5.297029 GCAACCTCTAGCGAATTTCCTAAAT 59.703 40.000 0.00 0.00 0.00 1.40
772 2188 6.775594 AGTTCTTGTTTTCTTAAGCAACCT 57.224 33.333 12.36 2.83 32.13 3.50
773 2189 7.704271 AGTAGTTCTTGTTTTCTTAAGCAACC 58.296 34.615 12.36 0.00 32.13 3.77
862 2283 2.040278 CTGGTGGATTGGAAGACTTGGA 59.960 50.000 0.00 0.00 0.00 3.53
1282 2707 0.036388 AACGCCGATTCAGTGTCCAT 60.036 50.000 0.00 0.00 0.00 3.41
1637 3102 9.244799 CCAAAAATCCAAACAAAGACTAGTAAC 57.755 33.333 0.00 0.00 0.00 2.50
1733 3201 9.788889 GGCATACAGTTTTAGGGTTATATACTT 57.211 33.333 0.00 0.00 0.00 2.24
1734 3202 8.940982 TGGCATACAGTTTTAGGGTTATATACT 58.059 33.333 0.00 0.00 0.00 2.12
1735 3203 9.216117 CTGGCATACAGTTTTAGGGTTATATAC 57.784 37.037 0.00 0.00 42.42 1.47
2027 6646 3.879295 ACACACATATCTAGGTTGCATGC 59.121 43.478 11.82 11.82 0.00 4.06
2185 8163 3.059733 CACCCAATTGTGAAAAATGCACG 60.060 43.478 4.43 0.00 38.55 5.34
2283 8261 7.703621 AGAATCTGCATATCAAAATTGAAACCG 59.296 33.333 0.00 0.00 41.13 4.44
2510 8488 5.062058 CGAAAAATAATGTCACAACATGGCC 59.938 40.000 0.00 0.00 45.48 5.36
2511 8489 5.633182 ACGAAAAATAATGTCACAACATGGC 59.367 36.000 0.00 0.00 45.48 4.40
2847 8856 5.581126 TTACCAAAAGGCAGCATATTCTG 57.419 39.130 0.00 0.00 37.15 3.02
2968 9368 7.444299 AGTTATGTGACATTCTGGCAAAATTT 58.556 30.769 2.29 0.00 36.98 1.82
2998 9398 7.501559 AGCATGGCCATATCTGCTTATATTTAG 59.498 37.037 23.00 4.75 42.03 1.85
3013 9413 2.442878 ACCAGTATTGAGCATGGCCATA 59.557 45.455 20.30 1.93 36.21 2.74
3275 9680 1.668919 CGTTGACTAGTGCCACGTCAT 60.669 52.381 0.00 0.00 37.50 3.06
3279 9684 2.380410 GCCGTTGACTAGTGCCACG 61.380 63.158 0.00 5.60 0.00 4.94
3691 10878 4.240103 CATCTCCCCGCCATCGCA 62.240 66.667 0.00 0.00 34.03 5.10
3799 10988 1.217689 CTCTCTCCCCAGGTCAGATCT 59.782 57.143 0.00 0.00 0.00 2.75
3859 11090 0.685097 ATGTGGCACTAGTCAACGGT 59.315 50.000 19.83 0.00 0.00 4.83
3882 11113 1.128809 TGGTTTTCCTCCACCCGCTA 61.129 55.000 0.00 0.00 41.38 4.26
4449 11727 7.707893 GCTTTGGATCTGTAATATGCAACAAAT 59.292 33.333 0.00 0.00 34.86 2.32
4462 11740 1.839994 CTGGGGAGCTTTGGATCTGTA 59.160 52.381 0.00 0.00 0.00 2.74
4605 11886 1.202154 CCTAACGTAGTCAGCACTCGG 60.202 57.143 0.00 0.00 45.00 4.63
4612 11893 1.736032 GCTGGTGCCTAACGTAGTCAG 60.736 57.143 0.00 0.00 45.00 3.51
4707 11998 7.839907 AGAGCAGGATTATCTATCTGATGTTC 58.160 38.462 0.00 0.00 36.65 3.18
4764 12055 8.050170 GCAACGTTTATCTCTGTTTTCAAAAAG 58.950 33.333 0.00 0.00 0.00 2.27
4768 12059 6.125327 TGCAACGTTTATCTCTGTTTTCAA 57.875 33.333 0.00 0.00 0.00 2.69
4769 12060 5.743026 TGCAACGTTTATCTCTGTTTTCA 57.257 34.783 0.00 0.00 0.00 2.69
4785 12076 6.266203 TGTAAACAACAATCAAATGCAACG 57.734 33.333 0.00 0.00 34.29 4.10
4828 12358 2.250188 GTGCAACACATTATCGCCAAC 58.750 47.619 0.00 0.00 36.32 3.77
4863 12393 1.828595 TGCTTTGCATCATTCCAGCAT 59.171 42.857 0.00 0.00 38.19 3.79
4897 12427 2.638480 TCTGTACAGTTGGCAAGCTT 57.362 45.000 21.99 0.00 0.00 3.74
4906 12436 7.986085 AACAATAGCATTCTTCTGTACAGTT 57.014 32.000 21.99 2.68 0.00 3.16
4941 12471 1.042229 ACTTGATGCCTTGCTTTGCA 58.958 45.000 0.00 0.00 42.52 4.08
4942 12472 2.064014 GAACTTGATGCCTTGCTTTGC 58.936 47.619 0.00 0.00 0.00 3.68
4943 12473 3.374220 TGAACTTGATGCCTTGCTTTG 57.626 42.857 0.00 0.00 0.00 2.77
4944 12474 3.385755 ACTTGAACTTGATGCCTTGCTTT 59.614 39.130 0.00 0.00 0.00 3.51
4945 12475 2.961062 ACTTGAACTTGATGCCTTGCTT 59.039 40.909 0.00 0.00 0.00 3.91
4946 12476 2.590821 ACTTGAACTTGATGCCTTGCT 58.409 42.857 0.00 0.00 0.00 3.91
4947 12477 3.005155 AGAACTTGAACTTGATGCCTTGC 59.995 43.478 0.00 0.00 0.00 4.01
4948 12478 4.843220 AGAACTTGAACTTGATGCCTTG 57.157 40.909 0.00 0.00 0.00 3.61
4949 12479 4.457257 GCTAGAACTTGAACTTGATGCCTT 59.543 41.667 0.00 0.00 0.00 4.35
4950 12480 4.006319 GCTAGAACTTGAACTTGATGCCT 58.994 43.478 0.00 0.00 0.00 4.75
4951 12481 4.006319 AGCTAGAACTTGAACTTGATGCC 58.994 43.478 0.00 0.00 0.00 4.40
4952 12482 5.619625 AAGCTAGAACTTGAACTTGATGC 57.380 39.130 0.00 0.00 0.00 3.91
4953 12483 7.230222 CGTTAAGCTAGAACTTGAACTTGATG 58.770 38.462 9.15 0.00 0.00 3.07
4954 12484 6.128526 GCGTTAAGCTAGAACTTGAACTTGAT 60.129 38.462 9.15 0.00 44.04 2.57
4955 12485 5.176958 GCGTTAAGCTAGAACTTGAACTTGA 59.823 40.000 9.15 0.00 44.04 3.02
4956 12486 5.374898 GCGTTAAGCTAGAACTTGAACTTG 58.625 41.667 9.15 0.00 44.04 3.16
4957 12487 5.593183 GCGTTAAGCTAGAACTTGAACTT 57.407 39.130 9.15 0.00 44.04 2.66
5046 12576 6.574350 TGATTTTCAACGGTTTTTGGTACAT 58.426 32.000 0.00 0.00 39.30 2.29
5077 12607 2.884639 CTCCCTCGGTTTGAAAATGTGT 59.115 45.455 0.00 0.00 0.00 3.72
5110 12640 6.043243 CACATATGGTAGTTATCAGGGTCCTT 59.957 42.308 7.80 0.00 0.00 3.36
5124 12654 2.595124 TCGTGCCACACATATGGTAG 57.405 50.000 7.80 0.00 42.28 3.18
5126 12656 1.737838 CTTCGTGCCACACATATGGT 58.262 50.000 7.80 0.00 42.28 3.55
5128 12658 1.085893 TGCTTCGTGCCACACATATG 58.914 50.000 0.00 0.00 42.00 1.78
5130 12660 1.819928 ATTGCTTCGTGCCACACATA 58.180 45.000 0.00 0.00 42.00 2.29
5132 12662 0.743688 AAATTGCTTCGTGCCACACA 59.256 45.000 0.00 0.00 42.00 3.72
5168 12698 4.573607 CCTCGGGTAACTAAACTTATTGCC 59.426 45.833 0.00 0.00 0.00 4.52
5169 12699 5.422145 TCCTCGGGTAACTAAACTTATTGC 58.578 41.667 0.00 0.00 0.00 3.56
5170 12700 7.224167 GTCATCCTCGGGTAACTAAACTTATTG 59.776 40.741 0.00 0.00 0.00 1.90
5171 12701 7.093201 TGTCATCCTCGGGTAACTAAACTTATT 60.093 37.037 0.00 0.00 0.00 1.40
5173 12703 5.716228 TGTCATCCTCGGGTAACTAAACTTA 59.284 40.000 0.00 0.00 0.00 2.24
5222 12752 5.590530 AACTTGCCATCTACAACACAAAA 57.409 34.783 0.00 0.00 0.00 2.44
5226 12756 4.275936 ACTGAAACTTGCCATCTACAACAC 59.724 41.667 0.00 0.00 0.00 3.32
5227 12757 4.460263 ACTGAAACTTGCCATCTACAACA 58.540 39.130 0.00 0.00 0.00 3.33
5231 12761 5.948992 AGAAACTGAAACTTGCCATCTAC 57.051 39.130 0.00 0.00 0.00 2.59
5233 12763 5.859205 AAAGAAACTGAAACTTGCCATCT 57.141 34.783 0.00 0.00 0.00 2.90
5234 12764 6.908870 AAAAAGAAACTGAAACTTGCCATC 57.091 33.333 0.00 0.00 0.00 3.51
5266 12796 6.339587 ACTCTAAAATTGCCATCCGAAAAA 57.660 33.333 0.00 0.00 0.00 1.94
5267 12797 5.975693 ACTCTAAAATTGCCATCCGAAAA 57.024 34.783 0.00 0.00 0.00 2.29
5268 12798 5.975693 AACTCTAAAATTGCCATCCGAAA 57.024 34.783 0.00 0.00 0.00 3.46
5269 12799 6.411376 TCTAACTCTAAAATTGCCATCCGAA 58.589 36.000 0.00 0.00 0.00 4.30
5270 12800 5.984725 TCTAACTCTAAAATTGCCATCCGA 58.015 37.500 0.00 0.00 0.00 4.55
5271 12801 5.237344 CCTCTAACTCTAAAATTGCCATCCG 59.763 44.000 0.00 0.00 0.00 4.18
5272 12802 6.357367 TCCTCTAACTCTAAAATTGCCATCC 58.643 40.000 0.00 0.00 0.00 3.51
5273 12803 7.040823 CCATCCTCTAACTCTAAAATTGCCATC 60.041 40.741 0.00 0.00 0.00 3.51
5274 12804 6.774656 CCATCCTCTAACTCTAAAATTGCCAT 59.225 38.462 0.00 0.00 0.00 4.40
5275 12805 6.122277 CCATCCTCTAACTCTAAAATTGCCA 58.878 40.000 0.00 0.00 0.00 4.92
5276 12806 5.532779 CCCATCCTCTAACTCTAAAATTGCC 59.467 44.000 0.00 0.00 0.00 4.52
5277 12807 6.357367 TCCCATCCTCTAACTCTAAAATTGC 58.643 40.000 0.00 0.00 0.00 3.56
5278 12808 8.986929 ATTCCCATCCTCTAACTCTAAAATTG 57.013 34.615 0.00 0.00 0.00 2.32
5285 12815 8.001292 CCATTTTAATTCCCATCCTCTAACTCT 58.999 37.037 0.00 0.00 0.00 3.24
5286 12816 7.780271 ACCATTTTAATTCCCATCCTCTAACTC 59.220 37.037 0.00 0.00 0.00 3.01
5287 12817 7.652554 ACCATTTTAATTCCCATCCTCTAACT 58.347 34.615 0.00 0.00 0.00 2.24
5288 12818 7.898014 ACCATTTTAATTCCCATCCTCTAAC 57.102 36.000 0.00 0.00 0.00 2.34
5289 12819 7.717875 CGTACCATTTTAATTCCCATCCTCTAA 59.282 37.037 0.00 0.00 0.00 2.10
5290 12820 7.071447 TCGTACCATTTTAATTCCCATCCTCTA 59.929 37.037 0.00 0.00 0.00 2.43
5291 12821 6.062095 CGTACCATTTTAATTCCCATCCTCT 58.938 40.000 0.00 0.00 0.00 3.69
5292 12822 6.059484 TCGTACCATTTTAATTCCCATCCTC 58.941 40.000 0.00 0.00 0.00 3.71
5293 12823 6.008696 TCGTACCATTTTAATTCCCATCCT 57.991 37.500 0.00 0.00 0.00 3.24
5294 12824 6.017357 GTCTCGTACCATTTTAATTCCCATCC 60.017 42.308 0.00 0.00 0.00 3.51
5295 12825 6.766467 AGTCTCGTACCATTTTAATTCCCATC 59.234 38.462 0.00 0.00 0.00 3.51
5296 12826 6.659824 AGTCTCGTACCATTTTAATTCCCAT 58.340 36.000 0.00 0.00 0.00 4.00
5297 12827 6.057321 AGTCTCGTACCATTTTAATTCCCA 57.943 37.500 0.00 0.00 0.00 4.37
5298 12828 6.596497 TGAAGTCTCGTACCATTTTAATTCCC 59.404 38.462 0.00 0.00 0.00 3.97
5299 12829 7.605410 TGAAGTCTCGTACCATTTTAATTCC 57.395 36.000 0.00 0.00 0.00 3.01
5302 12832 9.449719 AGATTTGAAGTCTCGTACCATTTTAAT 57.550 29.630 0.00 0.00 0.00 1.40
5303 12833 8.842358 AGATTTGAAGTCTCGTACCATTTTAA 57.158 30.769 0.00 0.00 0.00 1.52
5305 12835 9.449719 AATAGATTTGAAGTCTCGTACCATTTT 57.550 29.630 0.00 0.00 0.00 1.82
5306 12836 8.883731 CAATAGATTTGAAGTCTCGTACCATTT 58.116 33.333 0.00 0.00 0.00 2.32
5307 12837 8.041323 ACAATAGATTTGAAGTCTCGTACCATT 58.959 33.333 0.00 0.00 0.00 3.16
5308 12838 7.556844 ACAATAGATTTGAAGTCTCGTACCAT 58.443 34.615 0.00 0.00 0.00 3.55
5309 12839 6.931838 ACAATAGATTTGAAGTCTCGTACCA 58.068 36.000 0.00 0.00 0.00 3.25
5310 12840 7.829378 AACAATAGATTTGAAGTCTCGTACC 57.171 36.000 0.00 0.00 0.00 3.34
5311 12841 8.169268 CCAAACAATAGATTTGAAGTCTCGTAC 58.831 37.037 0.00 0.00 39.01 3.67
5312 12842 7.876068 ACCAAACAATAGATTTGAAGTCTCGTA 59.124 33.333 0.00 0.00 39.01 3.43
5313 12843 6.710744 ACCAAACAATAGATTTGAAGTCTCGT 59.289 34.615 0.00 0.00 39.01 4.18
5314 12844 7.133891 ACCAAACAATAGATTTGAAGTCTCG 57.866 36.000 0.00 0.00 39.01 4.04
5316 12846 9.014297 CCTAACCAAACAATAGATTTGAAGTCT 57.986 33.333 0.00 0.00 39.01 3.24
5317 12847 8.244113 CCCTAACCAAACAATAGATTTGAAGTC 58.756 37.037 0.00 0.00 39.01 3.01
5318 12848 7.178451 CCCCTAACCAAACAATAGATTTGAAGT 59.822 37.037 0.00 0.00 39.01 3.01
5319 12849 7.396055 TCCCCTAACCAAACAATAGATTTGAAG 59.604 37.037 0.00 0.00 39.01 3.02
5320 12850 7.242359 TCCCCTAACCAAACAATAGATTTGAA 58.758 34.615 0.00 0.00 39.01 2.69
5321 12851 6.795590 TCCCCTAACCAAACAATAGATTTGA 58.204 36.000 0.00 0.00 39.01 2.69
5322 12852 7.660030 ATCCCCTAACCAAACAATAGATTTG 57.340 36.000 0.00 0.00 36.90 2.32
5323 12853 8.004801 CCTATCCCCTAACCAAACAATAGATTT 58.995 37.037 0.00 0.00 0.00 2.17
5324 12854 7.352522 TCCTATCCCCTAACCAAACAATAGATT 59.647 37.037 0.00 0.00 0.00 2.40
5325 12855 6.855061 TCCTATCCCCTAACCAAACAATAGAT 59.145 38.462 0.00 0.00 0.00 1.98
5326 12856 6.214278 TCCTATCCCCTAACCAAACAATAGA 58.786 40.000 0.00 0.00 0.00 1.98
5327 12857 6.509523 TCCTATCCCCTAACCAAACAATAG 57.490 41.667 0.00 0.00 0.00 1.73
5328 12858 6.911993 TTCCTATCCCCTAACCAAACAATA 57.088 37.500 0.00 0.00 0.00 1.90
5329 12859 5.806955 TTCCTATCCCCTAACCAAACAAT 57.193 39.130 0.00 0.00 0.00 2.71
5330 12860 5.602291 TTTCCTATCCCCTAACCAAACAA 57.398 39.130 0.00 0.00 0.00 2.83
5331 12861 5.806955 ATTTCCTATCCCCTAACCAAACA 57.193 39.130 0.00 0.00 0.00 2.83
5332 12862 8.777578 ATAAATTTCCTATCCCCTAACCAAAC 57.222 34.615 0.00 0.00 0.00 2.93
5336 12866 9.529823 CCTTTATAAATTTCCTATCCCCTAACC 57.470 37.037 0.00 0.00 0.00 2.85
5346 12876 9.280174 CGTGCCTATTCCTTTATAAATTTCCTA 57.720 33.333 0.00 0.00 0.00 2.94
5347 12877 7.778382 ACGTGCCTATTCCTTTATAAATTTCCT 59.222 33.333 0.00 0.00 0.00 3.36
5348 12878 7.860872 CACGTGCCTATTCCTTTATAAATTTCC 59.139 37.037 0.82 0.00 0.00 3.13
5349 12879 8.617809 TCACGTGCCTATTCCTTTATAAATTTC 58.382 33.333 11.67 0.00 0.00 2.17
5350 12880 8.403236 GTCACGTGCCTATTCCTTTATAAATTT 58.597 33.333 11.67 0.00 0.00 1.82
5351 12881 7.773690 AGTCACGTGCCTATTCCTTTATAAATT 59.226 33.333 11.67 0.00 0.00 1.82
5352 12882 7.280356 AGTCACGTGCCTATTCCTTTATAAAT 58.720 34.615 11.67 0.00 0.00 1.40
5353 12883 6.646267 AGTCACGTGCCTATTCCTTTATAAA 58.354 36.000 11.67 0.00 0.00 1.40
5354 12884 6.229936 AGTCACGTGCCTATTCCTTTATAA 57.770 37.500 11.67 0.00 0.00 0.98
5355 12885 5.864418 AGTCACGTGCCTATTCCTTTATA 57.136 39.130 11.67 0.00 0.00 0.98
5356 12886 4.755266 AGTCACGTGCCTATTCCTTTAT 57.245 40.909 11.67 0.00 0.00 1.40
5357 12887 4.546829 AAGTCACGTGCCTATTCCTTTA 57.453 40.909 11.67 0.00 0.00 1.85
5358 12888 3.418684 AAGTCACGTGCCTATTCCTTT 57.581 42.857 11.67 0.00 0.00 3.11
5359 12889 4.222145 TCTTAAGTCACGTGCCTATTCCTT 59.778 41.667 11.67 6.31 0.00 3.36
5360 12890 3.767673 TCTTAAGTCACGTGCCTATTCCT 59.232 43.478 11.67 0.00 0.00 3.36
5361 12891 3.864003 GTCTTAAGTCACGTGCCTATTCC 59.136 47.826 11.67 0.00 0.00 3.01
5362 12892 4.745649 AGTCTTAAGTCACGTGCCTATTC 58.254 43.478 11.67 0.00 0.00 1.75
5363 12893 4.803098 AGTCTTAAGTCACGTGCCTATT 57.197 40.909 11.67 5.21 0.00 1.73
5364 12894 4.803098 AAGTCTTAAGTCACGTGCCTAT 57.197 40.909 11.67 0.00 0.00 2.57
5365 12895 4.595762 AAAGTCTTAAGTCACGTGCCTA 57.404 40.909 11.67 0.00 0.00 3.93
5366 12896 3.470645 AAAGTCTTAAGTCACGTGCCT 57.529 42.857 11.67 0.28 0.00 4.75
5367 12897 4.748600 AGTTAAAGTCTTAAGTCACGTGCC 59.251 41.667 11.67 0.00 0.00 5.01
5368 12898 5.107568 GGAGTTAAAGTCTTAAGTCACGTGC 60.108 44.000 11.67 6.26 44.37 5.34
5369 12899 5.404667 GGGAGTTAAAGTCTTAAGTCACGTG 59.595 44.000 9.94 9.94 44.37 4.49
5370 12900 5.536260 GGGAGTTAAAGTCTTAAGTCACGT 58.464 41.667 1.63 0.00 44.37 4.49
5372 12902 6.310711 CGATGGGAGTTAAAGTCTTAAGTCAC 59.689 42.308 1.63 9.97 45.47 3.67
5373 12903 6.014840 ACGATGGGAGTTAAAGTCTTAAGTCA 60.015 38.462 1.63 0.00 44.37 3.41
5374 12904 6.396450 ACGATGGGAGTTAAAGTCTTAAGTC 58.604 40.000 1.63 0.00 42.89 3.01
5375 12905 6.356186 ACGATGGGAGTTAAAGTCTTAAGT 57.644 37.500 1.63 0.00 34.06 2.24
5376 12906 7.668525 AAACGATGGGAGTTAAAGTCTTAAG 57.331 36.000 0.00 0.00 0.00 1.85
5377 12907 9.729281 ATAAAACGATGGGAGTTAAAGTCTTAA 57.271 29.630 0.00 0.00 0.00 1.85
5378 12908 9.729281 AATAAAACGATGGGAGTTAAAGTCTTA 57.271 29.630 0.00 0.00 0.00 2.10
5379 12909 8.631480 AATAAAACGATGGGAGTTAAAGTCTT 57.369 30.769 0.00 0.00 0.00 3.01
5380 12910 9.729281 TTAATAAAACGATGGGAGTTAAAGTCT 57.271 29.630 0.00 0.00 0.00 3.24
5381 12911 9.764870 GTTAATAAAACGATGGGAGTTAAAGTC 57.235 33.333 0.00 0.00 0.00 3.01
5382 12912 9.287373 TGTTAATAAAACGATGGGAGTTAAAGT 57.713 29.630 0.00 0.00 0.00 2.66
5385 12915 8.732531 CCTTGTTAATAAAACGATGGGAGTTAA 58.267 33.333 0.00 0.00 0.00 2.01
5386 12916 8.102047 TCCTTGTTAATAAAACGATGGGAGTTA 58.898 33.333 0.00 0.00 0.00 2.24
5387 12917 6.943718 TCCTTGTTAATAAAACGATGGGAGTT 59.056 34.615 0.00 0.00 0.00 3.01
5388 12918 6.478129 TCCTTGTTAATAAAACGATGGGAGT 58.522 36.000 0.00 0.00 0.00 3.85
5389 12919 6.995511 TCCTTGTTAATAAAACGATGGGAG 57.004 37.500 0.00 0.00 0.00 4.30
5390 12920 7.948034 ATTCCTTGTTAATAAAACGATGGGA 57.052 32.000 0.00 0.00 0.00 4.37
5391 12921 8.032451 ACAATTCCTTGTTAATAAAACGATGGG 58.968 33.333 0.00 0.00 43.05 4.00
5392 12922 8.980143 ACAATTCCTTGTTAATAAAACGATGG 57.020 30.769 0.00 0.00 43.05 3.51
5421 12951 9.927081 ATGATGAAGGGTTAAGATTAACTCATT 57.073 29.630 15.75 9.65 44.63 2.57
5442 12972 9.664332 CCAGGGAAGAGAATATAAGTTATGATG 57.336 37.037 5.61 0.00 0.00 3.07
5443 12973 9.398921 ACCAGGGAAGAGAATATAAGTTATGAT 57.601 33.333 5.61 0.00 0.00 2.45
5444 12974 8.798975 ACCAGGGAAGAGAATATAAGTTATGA 57.201 34.615 5.61 0.00 0.00 2.15
5445 12975 8.875168 AGACCAGGGAAGAGAATATAAGTTATG 58.125 37.037 5.61 0.00 0.00 1.90
5447 12977 9.589461 CTAGACCAGGGAAGAGAATATAAGTTA 57.411 37.037 0.00 0.00 0.00 2.24
5448 12978 8.068733 ACTAGACCAGGGAAGAGAATATAAGTT 58.931 37.037 0.00 0.00 0.00 2.66
5449 12979 7.597327 ACTAGACCAGGGAAGAGAATATAAGT 58.403 38.462 0.00 0.00 0.00 2.24
5450 12980 7.177744 GGACTAGACCAGGGAAGAGAATATAAG 59.822 44.444 6.35 0.00 0.00 1.73
5451 12981 7.011382 GGACTAGACCAGGGAAGAGAATATAA 58.989 42.308 6.35 0.00 0.00 0.98
5452 12982 6.468945 GGGACTAGACCAGGGAAGAGAATATA 60.469 46.154 13.36 0.00 0.00 0.86
5453 12983 5.399113 GGACTAGACCAGGGAAGAGAATAT 58.601 45.833 6.35 0.00 0.00 1.28
5454 12984 4.387664 GGGACTAGACCAGGGAAGAGAATA 60.388 50.000 13.36 0.00 0.00 1.75
5455 12985 3.631346 GGGACTAGACCAGGGAAGAGAAT 60.631 52.174 13.36 0.00 0.00 2.40
5456 12986 2.292323 GGGACTAGACCAGGGAAGAGAA 60.292 54.545 13.36 0.00 0.00 2.87
5457 12987 1.288335 GGGACTAGACCAGGGAAGAGA 59.712 57.143 13.36 0.00 0.00 3.10
5458 12988 1.289530 AGGGACTAGACCAGGGAAGAG 59.710 57.143 13.36 0.00 36.02 2.85
5459 12989 1.288335 GAGGGACTAGACCAGGGAAGA 59.712 57.143 13.36 0.00 41.55 2.87
5460 12990 1.783071 GAGGGACTAGACCAGGGAAG 58.217 60.000 13.36 0.00 41.55 3.46
5461 12991 0.033405 CGAGGGACTAGACCAGGGAA 60.033 60.000 13.36 0.00 41.55 3.97
5462 12992 1.212934 ACGAGGGACTAGACCAGGGA 61.213 60.000 13.36 0.00 41.55 4.20
5463 12993 0.752376 GACGAGGGACTAGACCAGGG 60.752 65.000 13.36 3.73 41.55 4.45
5464 12994 0.034380 TGACGAGGGACTAGACCAGG 60.034 60.000 13.36 4.06 41.55 4.45
5465 12995 1.473278 GTTGACGAGGGACTAGACCAG 59.527 57.143 13.36 6.36 41.55 4.00
5466 12996 1.542492 GTTGACGAGGGACTAGACCA 58.458 55.000 13.36 0.00 41.55 4.02
5467 12997 0.816373 GGTTGACGAGGGACTAGACC 59.184 60.000 2.23 2.23 41.55 3.85
5468 12998 1.542492 TGGTTGACGAGGGACTAGAC 58.458 55.000 0.00 0.00 41.55 2.59
5469 12999 2.297698 TTGGTTGACGAGGGACTAGA 57.702 50.000 0.00 0.00 41.55 2.43
5470 13000 2.036733 TGTTTGGTTGACGAGGGACTAG 59.963 50.000 0.00 0.00 41.55 2.57
5471 13001 2.040939 TGTTTGGTTGACGAGGGACTA 58.959 47.619 0.00 0.00 41.55 2.59
5473 13003 1.602377 CTTGTTTGGTTGACGAGGGAC 59.398 52.381 0.00 0.00 0.00 4.46
5474 13004 1.487142 TCTTGTTTGGTTGACGAGGGA 59.513 47.619 0.00 0.00 0.00 4.20
5475 13005 1.961793 TCTTGTTTGGTTGACGAGGG 58.038 50.000 0.00 0.00 0.00 4.30
5476 13006 4.364415 TTTTCTTGTTTGGTTGACGAGG 57.636 40.909 0.00 0.00 0.00 4.63
5477 13007 6.491394 TGTATTTTCTTGTTTGGTTGACGAG 58.509 36.000 0.00 0.00 0.00 4.18
5478 13008 6.438259 TGTATTTTCTTGTTTGGTTGACGA 57.562 33.333 0.00 0.00 0.00 4.20
5479 13009 7.513190 TTTGTATTTTCTTGTTTGGTTGACG 57.487 32.000 0.00 0.00 0.00 4.35
5480 13010 9.914923 GAATTTGTATTTTCTTGTTTGGTTGAC 57.085 29.630 0.00 0.00 0.00 3.18
5481 13011 9.883142 AGAATTTGTATTTTCTTGTTTGGTTGA 57.117 25.926 0.00 0.00 0.00 3.18
5515 13045 9.585099 GGCACATGATAAGAATTATGTTTGAAA 57.415 29.630 0.00 0.00 42.35 2.69
5516 13046 8.747471 TGGCACATGATAAGAATTATGTTTGAA 58.253 29.630 0.00 0.00 42.35 2.69
5517 13047 8.291191 TGGCACATGATAAGAATTATGTTTGA 57.709 30.769 0.00 0.00 42.35 2.69
5518 13048 7.650504 CCTGGCACATGATAAGAATTATGTTTG 59.349 37.037 0.00 0.00 39.57 2.93
5519 13049 7.201938 CCCTGGCACATGATAAGAATTATGTTT 60.202 37.037 0.00 0.00 39.57 2.83
5520 13050 6.266103 CCCTGGCACATGATAAGAATTATGTT 59.734 38.462 0.00 0.00 39.57 2.71
5521 13051 5.771666 CCCTGGCACATGATAAGAATTATGT 59.228 40.000 0.00 0.00 41.59 2.29
5522 13052 6.005823 TCCCTGGCACATGATAAGAATTATG 58.994 40.000 0.00 0.00 38.82 1.90
5523 13053 6.204852 TCCCTGGCACATGATAAGAATTAT 57.795 37.500 0.00 0.00 40.92 1.28
5524 13054 5.645056 TCCCTGGCACATGATAAGAATTA 57.355 39.130 0.00 0.00 38.20 1.40
5525 13055 4.524802 TCCCTGGCACATGATAAGAATT 57.475 40.909 0.00 0.00 38.20 2.17
5526 13056 4.736611 ATCCCTGGCACATGATAAGAAT 57.263 40.909 0.00 0.00 38.20 2.40
5527 13057 4.524802 AATCCCTGGCACATGATAAGAA 57.475 40.909 0.00 0.00 38.20 2.52
5528 13058 4.042062 CCTAATCCCTGGCACATGATAAGA 59.958 45.833 0.00 0.00 38.20 2.10
5529 13059 4.330250 CCTAATCCCTGGCACATGATAAG 58.670 47.826 0.00 0.00 38.20 1.73
5530 13060 3.074390 CCCTAATCCCTGGCACATGATAA 59.926 47.826 0.00 0.00 38.20 1.75
5531 13061 2.644299 CCCTAATCCCTGGCACATGATA 59.356 50.000 0.00 0.00 38.20 2.15
5532 13062 1.426598 CCCTAATCCCTGGCACATGAT 59.573 52.381 0.00 0.00 38.20 2.45
5533 13063 0.846015 CCCTAATCCCTGGCACATGA 59.154 55.000 0.00 0.00 38.20 3.07
5534 13064 0.846015 TCCCTAATCCCTGGCACATG 59.154 55.000 0.00 0.00 38.20 3.21
5535 13065 1.838611 ATCCCTAATCCCTGGCACAT 58.161 50.000 0.00 0.00 38.20 3.21
5536 13066 2.505672 TATCCCTAATCCCTGGCACA 57.494 50.000 0.00 0.00 0.00 4.57
5537 13067 3.876309 TTTATCCCTAATCCCTGGCAC 57.124 47.619 0.00 0.00 0.00 5.01
5538 13068 4.418526 TCATTTTATCCCTAATCCCTGGCA 59.581 41.667 0.00 0.00 0.00 4.92
5539 13069 4.767409 GTCATTTTATCCCTAATCCCTGGC 59.233 45.833 0.00 0.00 0.00 4.85
5540 13070 6.183361 TGAGTCATTTTATCCCTAATCCCTGG 60.183 42.308 0.00 0.00 0.00 4.45
5541 13071 6.841601 TGAGTCATTTTATCCCTAATCCCTG 58.158 40.000 0.00 0.00 0.00 4.45
5542 13072 7.257199 GGATGAGTCATTTTATCCCTAATCCCT 60.257 40.741 7.16 0.00 34.38 4.20
5543 13073 6.887002 GGATGAGTCATTTTATCCCTAATCCC 59.113 42.308 7.16 0.00 34.38 3.85
5544 13074 7.929941 GGATGAGTCATTTTATCCCTAATCC 57.070 40.000 7.16 0.00 34.38 3.01
5551 13081 6.302269 AGACATGGGATGAGTCATTTTATCC 58.698 40.000 7.16 4.06 38.66 2.59
5552 13082 8.908786 TTAGACATGGGATGAGTCATTTTATC 57.091 34.615 7.16 1.60 34.80 1.75
5553 13083 9.512588 GATTAGACATGGGATGAGTCATTTTAT 57.487 33.333 7.16 0.00 34.80 1.40
5554 13084 8.717717 AGATTAGACATGGGATGAGTCATTTTA 58.282 33.333 7.16 0.00 34.80 1.52
5555 13085 7.580910 AGATTAGACATGGGATGAGTCATTTT 58.419 34.615 7.16 0.00 34.80 1.82
5556 13086 7.146715 AGATTAGACATGGGATGAGTCATTT 57.853 36.000 7.16 0.00 34.80 2.32
5557 13087 6.328410 TGAGATTAGACATGGGATGAGTCATT 59.672 38.462 7.16 0.00 34.80 2.57
5558 13088 5.842874 TGAGATTAGACATGGGATGAGTCAT 59.157 40.000 4.98 4.98 34.80 3.06
5559 13089 5.211201 TGAGATTAGACATGGGATGAGTCA 58.789 41.667 0.00 0.00 34.80 3.41
5560 13090 5.798125 TGAGATTAGACATGGGATGAGTC 57.202 43.478 0.00 0.00 0.00 3.36
5561 13091 6.760440 ATTGAGATTAGACATGGGATGAGT 57.240 37.500 0.00 0.00 0.00 3.41
5562 13092 7.674120 TGTATTGAGATTAGACATGGGATGAG 58.326 38.462 0.00 0.00 0.00 2.90
5563 13093 7.616528 TGTATTGAGATTAGACATGGGATGA 57.383 36.000 0.00 0.00 0.00 2.92


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.