Multiple sequence alignment - TraesCS4D01G232700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G232700 chr4D 100.000 3953 0 0 1 3953 393634789 393638741 0.000000e+00 7300.0
1 TraesCS4D01G232700 chr4D 89.181 342 35 2 2456 2796 28840328 28840668 3.650000e-115 425.0
2 TraesCS4D01G232700 chr4D 90.794 315 29 0 2069 2383 28839748 28840062 4.720000e-114 422.0
3 TraesCS4D01G232700 chr4D 93.088 217 15 0 1169 1385 28837071 28837287 6.370000e-83 318.0
4 TraesCS4D01G232700 chr4D 90.566 53 5 0 1037 1089 28560079 28560131 1.970000e-08 71.3
5 TraesCS4D01G232700 chr4A 91.005 2946 158 50 272 3146 75216069 75213160 0.000000e+00 3873.0
6 TraesCS4D01G232700 chr4A 90.418 741 54 11 2073 2799 641452097 641452834 0.000000e+00 959.0
7 TraesCS4D01G232700 chr4A 84.327 721 64 32 995 1680 641451078 641451784 0.000000e+00 660.0
8 TraesCS4D01G232700 chr4A 91.746 315 26 0 2069 2383 574870090 574869776 4.690000e-119 438.0
9 TraesCS4D01G232700 chr4A 93.665 221 14 0 1765 1985 641451879 641452099 8.190000e-87 331.0
10 TraesCS4D01G232700 chr4A 94.787 211 11 0 1175 1385 574872619 574872409 2.940000e-86 329.0
11 TraesCS4D01G232700 chr4A 91.031 223 20 0 1 223 75216309 75216087 6.420000e-78 302.0
12 TraesCS4D01G232700 chr4A 87.815 238 25 4 1756 1990 574870435 574870199 3.890000e-70 276.0
13 TraesCS4D01G232700 chr4A 81.481 108 11 7 3025 3126 641453829 641453933 3.270000e-11 80.5
14 TraesCS4D01G232700 chr4A 90.566 53 5 0 1037 1089 574872772 574872720 1.970000e-08 71.3
15 TraesCS4D01G232700 chr4B 90.308 1785 98 33 4 1747 483336438 483334688 0.000000e+00 2268.0
16 TraesCS4D01G232700 chr4B 92.857 1400 44 25 1766 3146 483334558 483333196 0.000000e+00 1980.0
17 TraesCS4D01G232700 chr4B 85.408 747 85 17 2069 2797 41012874 41013614 0.000000e+00 754.0
18 TraesCS4D01G232700 chr4B 93.548 217 14 0 1169 1385 41010031 41010247 1.370000e-84 324.0
19 TraesCS4D01G232700 chr4B 89.189 222 22 2 1767 1987 41012544 41012764 3.890000e-70 276.0
20 TraesCS4D01G232700 chr4B 85.714 77 11 0 1029 1105 41009887 41009963 9.100000e-12 82.4
21 TraesCS4D01G232700 chr5D 89.879 741 57 14 2073 2799 530825402 530824666 0.000000e+00 937.0
22 TraesCS4D01G232700 chr5D 85.213 399 41 12 995 1384 530826381 530825992 1.030000e-105 394.0
23 TraesCS4D01G232700 chr5D 94.931 217 11 0 1467 1683 530825927 530825711 1.360000e-89 340.0
24 TraesCS4D01G232700 chr5D 92.727 220 15 1 1766 1985 530825618 530825400 2.290000e-82 316.0
25 TraesCS4D01G232700 chr5B 83.470 732 68 25 995 1683 670068148 670067427 2.000000e-177 632.0
26 TraesCS4D01G232700 chr5B 93.510 339 22 0 2461 2799 670066735 670066397 4.560000e-139 505.0
27 TraesCS4D01G232700 chr5B 93.146 321 15 1 2073 2386 670067140 670066820 7.740000e-127 464.0
28 TraesCS4D01G232700 chr5B 92.760 221 16 0 1765 1985 670067358 670067138 1.770000e-83 320.0
29 TraesCS4D01G232700 chr5B 88.158 76 7 2 3061 3135 670066284 670066210 5.440000e-14 89.8
30 TraesCS4D01G232700 chr2A 78.947 798 130 31 1198 1976 541775978 541776756 3.520000e-140 508.0
31 TraesCS4D01G232700 chr2A 92.720 261 17 2 2070 2329 541776851 541777110 3.730000e-100 375.0
32 TraesCS4D01G232700 chr2A 86.916 214 27 1 1478 1690 540849737 540849524 5.110000e-59 239.0
33 TraesCS4D01G232700 chr2B 82.834 501 64 17 1186 1683 477529803 477529322 2.820000e-116 429.0
34 TraesCS4D01G232700 chr2B 89.720 214 22 0 1763 1976 477574020 477574233 1.400000e-69 274.0
35 TraesCS4D01G232700 chr2B 76.378 127 17 10 3555 3676 657470613 657470495 5.520000e-04 56.5
36 TraesCS4D01G232700 chr3D 94.393 214 12 0 1176 1389 603973432 603973645 2.940000e-86 329.0
37 TraesCS4D01G232700 chr3D 92.857 42 2 1 3555 3595 588113037 588112996 4.270000e-05 60.2
38 TraesCS4D01G232700 chr2D 86.916 214 27 1 1478 1690 403347463 403347250 5.110000e-59 239.0
39 TraesCS4D01G232700 chr3B 77.778 342 73 3 2459 2798 9917095 9917435 1.440000e-49 207.0
40 TraesCS4D01G232700 chr1A 77.570 107 12 10 3289 3387 561304512 561304614 2.000000e-03 54.7
41 TraesCS4D01G232700 chr1D 100.000 28 0 0 3360 3387 285562176 285562149 7.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G232700 chr4D 393634789 393638741 3952 False 7300.000000 7300 100.00000 1 3953 1 chr4D.!!$F2 3952
1 TraesCS4D01G232700 chr4D 28837071 28840668 3597 False 388.333333 425 91.02100 1169 2796 3 chr4D.!!$F3 1627
2 TraesCS4D01G232700 chr4A 75213160 75216309 3149 True 2087.500000 3873 91.01800 1 3146 2 chr4A.!!$R1 3145
3 TraesCS4D01G232700 chr4A 641451078 641453933 2855 False 507.625000 959 87.47275 995 3126 4 chr4A.!!$F1 2131
4 TraesCS4D01G232700 chr4A 574869776 574872772 2996 True 278.575000 438 91.22850 1037 2383 4 chr4A.!!$R2 1346
5 TraesCS4D01G232700 chr4B 483333196 483336438 3242 True 2124.000000 2268 91.58250 4 3146 2 chr4B.!!$R1 3142
6 TraesCS4D01G232700 chr4B 41009887 41013614 3727 False 359.100000 754 88.46475 1029 2797 4 chr4B.!!$F1 1768
7 TraesCS4D01G232700 chr5D 530824666 530826381 1715 True 496.750000 937 90.68750 995 2799 4 chr5D.!!$R1 1804
8 TraesCS4D01G232700 chr5B 670066210 670068148 1938 True 402.160000 632 90.20880 995 3135 5 chr5B.!!$R1 2140
9 TraesCS4D01G232700 chr2A 541775978 541777110 1132 False 441.500000 508 85.83350 1198 2329 2 chr2A.!!$F1 1131

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
438 456 0.733909 GCCCAAATGCACGAGAAAGC 60.734 55.0 0.00 0.00 0.0 3.51 F
1129 1178 0.742990 CTTGTTCATCGCCGGCCTAA 60.743 55.0 23.46 7.13 0.0 2.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2394 5503 0.033228 CCTCCTGTCCTGATCGATGC 59.967 60.0 0.54 0.00 0.00 3.91 R
3100 7242 1.020861 TACCATCACTGCAGCGCAAG 61.021 55.0 15.27 6.71 38.41 4.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 37 5.880341 ACTCAAGAAAAAGGAAAAGACACG 58.120 37.500 0.00 0.00 0.00 4.49
59 61 2.671396 GTCATCGGAATTGTGCGTAGTT 59.329 45.455 0.00 0.00 39.95 2.24
107 109 5.873179 TGGAACAAAAGTCCGATCATAAC 57.127 39.130 0.00 0.00 38.06 1.89
113 115 7.408132 ACAAAAGTCCGATCATAACATATCG 57.592 36.000 0.00 0.00 43.53 2.92
116 118 8.335356 CAAAAGTCCGATCATAACATATCGTTT 58.665 33.333 0.00 0.00 42.62 3.60
123 125 8.712363 CCGATCATAACATATCGTTTCATTCTT 58.288 33.333 0.00 0.00 42.62 2.52
214 220 0.967380 GGCATTCTGGGTTGGACAGG 60.967 60.000 0.00 0.00 36.62 4.00
269 284 7.817641 TGTAATATTGAGTAGTAGCATCCTCG 58.182 38.462 0.00 0.00 0.00 4.63
270 285 7.664318 TGTAATATTGAGTAGTAGCATCCTCGA 59.336 37.037 0.00 0.00 0.00 4.04
289 304 9.793259 ATCCTCGATTGTTAATTGGTGTAATAT 57.207 29.630 0.00 0.00 0.00 1.28
316 331 3.584834 GCATTTTCGGCTTTAACCATGT 58.415 40.909 0.00 0.00 0.00 3.21
320 335 4.759516 TTTCGGCTTTAACCATGTCTTC 57.240 40.909 0.00 0.00 0.00 2.87
438 456 0.733909 GCCCAAATGCACGAGAAAGC 60.734 55.000 0.00 0.00 0.00 3.51
558 578 4.558898 CGGACAGTACAAGCATATACCTCC 60.559 50.000 0.00 0.00 0.00 4.30
570 592 4.142534 GCATATACCTCCGATACGTAAGCA 60.143 45.833 0.00 0.00 45.62 3.91
605 627 2.827652 TGTTTGACAATTTTTCGGCCC 58.172 42.857 0.00 0.00 0.00 5.80
645 667 1.165907 CGAGTTTGCAGCCTTGGTCA 61.166 55.000 0.00 0.00 0.00 4.02
729 757 1.202417 GCAGGACGAATAGTAGCAGCA 60.202 52.381 0.00 0.00 0.00 4.41
784 817 2.039084 TCTCCTTGCTCCTTTGACCTTC 59.961 50.000 0.00 0.00 0.00 3.46
959 996 2.002586 GCATCGTATTGCGCCTGATAT 58.997 47.619 4.18 0.00 41.07 1.63
1113 1162 1.677576 TCTGCCTGCTTGTTGTTCTTG 59.322 47.619 0.00 0.00 0.00 3.02
1117 1166 2.159254 GCCTGCTTGTTGTTCTTGTTCA 60.159 45.455 0.00 0.00 0.00 3.18
1124 1173 0.871722 TTGTTCTTGTTCATCGCCGG 59.128 50.000 0.00 0.00 0.00 6.13
1129 1178 0.742990 CTTGTTCATCGCCGGCCTAA 60.743 55.000 23.46 7.13 0.00 2.69
1130 1179 1.022451 TTGTTCATCGCCGGCCTAAC 61.022 55.000 23.46 19.17 0.00 2.34
1131 1180 2.202824 TTCATCGCCGGCCTAACG 60.203 61.111 23.46 6.36 0.00 3.18
1181 1270 1.152963 GATTGGGGCGTGCAGGTAT 60.153 57.895 8.40 0.00 0.00 2.73
1727 4569 1.527433 CCTCTGCCTCGCGATCCATA 61.527 60.000 10.36 1.59 0.00 2.74
1739 4584 2.295909 GCGATCCATAGAACTGAGAGCT 59.704 50.000 0.00 0.00 0.00 4.09
1747 4592 7.495901 TCCATAGAACTGAGAGCTAAGAATTG 58.504 38.462 0.00 0.00 0.00 2.32
1994 5070 2.840651 AGCAGACAGGGTAAGCAATACT 59.159 45.455 0.00 0.00 34.74 2.12
1997 5073 4.360563 CAGACAGGGTAAGCAATACTACG 58.639 47.826 0.00 0.00 34.74 3.51
1998 5074 4.021916 AGACAGGGTAAGCAATACTACGT 58.978 43.478 0.00 0.00 34.74 3.57
2000 5076 5.067023 AGACAGGGTAAGCAATACTACGTAC 59.933 44.000 0.00 0.00 34.74 3.67
2001 5077 4.706476 ACAGGGTAAGCAATACTACGTACA 59.294 41.667 0.00 0.00 34.74 2.90
2002 5078 5.185635 ACAGGGTAAGCAATACTACGTACAA 59.814 40.000 0.00 0.00 34.74 2.41
2003 5079 5.747197 CAGGGTAAGCAATACTACGTACAAG 59.253 44.000 0.00 0.00 34.74 3.16
2004 5080 5.653769 AGGGTAAGCAATACTACGTACAAGA 59.346 40.000 0.00 0.00 34.74 3.02
2005 5081 5.975939 GGGTAAGCAATACTACGTACAAGAG 59.024 44.000 0.00 0.00 34.74 2.85
2310 5419 2.883828 CGACCAGCCCACCTTCACT 61.884 63.158 0.00 0.00 0.00 3.41
2376 5485 2.842256 GCTCATCCGCCATGGCTTG 61.842 63.158 33.07 25.43 39.32 4.01
2403 5630 3.520290 ACTTCTTTACCGCATCGATCA 57.480 42.857 0.00 0.00 0.00 2.92
2407 5634 2.128035 CTTTACCGCATCGATCAGGAC 58.872 52.381 19.30 0.00 0.00 3.85
2408 5635 1.107945 TTACCGCATCGATCAGGACA 58.892 50.000 19.30 6.65 0.00 4.02
2409 5636 0.668535 TACCGCATCGATCAGGACAG 59.331 55.000 19.30 0.00 0.00 3.51
2412 5639 0.318529 CGCATCGATCAGGACAGGAG 60.319 60.000 0.00 0.00 0.00 3.69
2413 5640 0.033228 GCATCGATCAGGACAGGAGG 59.967 60.000 0.00 0.00 0.00 4.30
2427 5658 5.015178 AGGACAGGAGGATTCATTTGGTAAA 59.985 40.000 0.00 0.00 0.00 2.01
2428 5659 5.358160 GGACAGGAGGATTCATTTGGTAAAG 59.642 44.000 0.00 0.00 0.00 1.85
2434 5665 4.952335 AGGATTCATTTGGTAAAGGAGCTG 59.048 41.667 0.00 0.00 32.29 4.24
2442 5673 2.094182 TGGTAAAGGAGCTGACACGATC 60.094 50.000 0.00 0.00 0.00 3.69
2443 5674 2.166664 GGTAAAGGAGCTGACACGATCT 59.833 50.000 0.00 0.00 0.00 2.75
2445 5676 3.512033 AAAGGAGCTGACACGATCTAC 57.488 47.619 0.00 0.00 0.00 2.59
2446 5677 2.130272 AGGAGCTGACACGATCTACA 57.870 50.000 0.00 0.00 0.00 2.74
2447 5678 2.660572 AGGAGCTGACACGATCTACAT 58.339 47.619 0.00 0.00 0.00 2.29
2448 5679 2.621055 AGGAGCTGACACGATCTACATC 59.379 50.000 0.00 0.00 0.00 3.06
2449 5680 2.287909 GGAGCTGACACGATCTACATCC 60.288 54.545 0.00 0.00 0.00 3.51
2451 5682 2.961741 AGCTGACACGATCTACATCCAT 59.038 45.455 0.00 0.00 0.00 3.41
2925 6702 1.065551 GCGTGGAAGAAGTTTGTGCTT 59.934 47.619 0.00 0.00 0.00 3.91
2957 7081 1.802337 AACGGCGTCTGCTAGTCACA 61.802 55.000 15.17 0.00 42.25 3.58
2985 7112 4.524328 ACAGTCTCCAAAACCCAAATCATC 59.476 41.667 0.00 0.00 0.00 2.92
3002 7140 7.884877 CCAAATCATCAAGCTACCCATCTTATA 59.115 37.037 0.00 0.00 0.00 0.98
3003 7141 8.944029 CAAATCATCAAGCTACCCATCTTATAG 58.056 37.037 0.00 0.00 0.00 1.31
3009 7147 9.998752 ATCAAGCTACCCATCTTATAGTACTAT 57.001 33.333 19.07 19.07 0.00 2.12
3100 7242 1.068610 TGGCTTTTATGACTTGCGCAC 60.069 47.619 11.12 0.00 0.00 5.34
3131 7275 6.237901 TGCAGTGATGGTACTATTTTCTGTT 58.762 36.000 14.99 0.00 0.00 3.16
3146 7290 7.713764 ATTTTCTGTTAAATGGTTCTGCAAC 57.286 32.000 0.00 0.00 0.00 4.17
3147 7291 6.463995 TTTCTGTTAAATGGTTCTGCAACT 57.536 33.333 0.00 0.00 32.50 3.16
3148 7292 7.575414 TTTCTGTTAAATGGTTCTGCAACTA 57.425 32.000 0.00 0.00 32.50 2.24
3149 7293 7.575414 TTCTGTTAAATGGTTCTGCAACTAA 57.425 32.000 0.00 0.00 32.50 2.24
3150 7294 7.575414 TCTGTTAAATGGTTCTGCAACTAAA 57.425 32.000 0.00 0.00 32.50 1.85
3151 7295 8.001881 TCTGTTAAATGGTTCTGCAACTAAAA 57.998 30.769 0.00 0.00 32.50 1.52
3152 7296 8.470805 TCTGTTAAATGGTTCTGCAACTAAAAA 58.529 29.630 0.00 0.00 32.50 1.94
3177 7321 7.894376 AAAATGCAGTGATGGTTATTTTCTG 57.106 32.000 0.00 0.00 0.00 3.02
3178 7322 6.594788 AATGCAGTGATGGTTATTTTCTGT 57.405 33.333 0.00 0.00 0.00 3.41
3179 7323 6.594788 ATGCAGTGATGGTTATTTTCTGTT 57.405 33.333 0.00 0.00 0.00 3.16
3180 7324 7.701539 ATGCAGTGATGGTTATTTTCTGTTA 57.298 32.000 0.00 0.00 0.00 2.41
3181 7325 7.517614 TGCAGTGATGGTTATTTTCTGTTAA 57.482 32.000 0.00 0.00 0.00 2.01
3182 7326 7.946207 TGCAGTGATGGTTATTTTCTGTTAAA 58.054 30.769 0.00 0.00 0.00 1.52
3183 7327 8.417106 TGCAGTGATGGTTATTTTCTGTTAAAA 58.583 29.630 0.00 0.00 0.00 1.52
3184 7328 9.423061 GCAGTGATGGTTATTTTCTGTTAAAAT 57.577 29.630 0.00 0.00 34.55 1.82
3186 7330 9.927668 AGTGATGGTTATTTTCTGTTAAAATGG 57.072 29.630 6.07 0.00 32.64 3.16
3187 7331 9.705290 GTGATGGTTATTTTCTGTTAAAATGGT 57.295 29.630 6.07 0.00 32.64 3.55
3191 7335 9.757227 TGGTTATTTTCTGTTAAAATGGTTCTG 57.243 29.630 6.07 0.00 32.64 3.02
3192 7336 8.708742 GGTTATTTTCTGTTAAAATGGTTCTGC 58.291 33.333 6.07 0.00 32.64 4.26
3193 7337 9.255304 GTTATTTTCTGTTAAAATGGTTCTGCA 57.745 29.630 6.07 0.00 32.64 4.41
3194 7338 9.823647 TTATTTTCTGTTAAAATGGTTCTGCAA 57.176 25.926 6.07 0.00 32.64 4.08
3195 7339 8.729805 ATTTTCTGTTAAAATGGTTCTGCAAA 57.270 26.923 0.00 0.00 0.00 3.68
3196 7340 8.729805 TTTTCTGTTAAAATGGTTCTGCAAAT 57.270 26.923 0.00 0.00 0.00 2.32
3197 7341 8.729805 TTTCTGTTAAAATGGTTCTGCAAATT 57.270 26.923 0.00 0.00 0.00 1.82
3198 7342 8.729805 TTCTGTTAAAATGGTTCTGCAAATTT 57.270 26.923 0.00 0.00 0.00 1.82
3199 7343 9.823647 TTCTGTTAAAATGGTTCTGCAAATTTA 57.176 25.926 0.00 0.00 0.00 1.40
3200 7344 9.995003 TCTGTTAAAATGGTTCTGCAAATTTAT 57.005 25.926 0.00 0.00 0.00 1.40
3248 7392 8.696410 TTTTTATGTCTCTTGTTTTCCACAAC 57.304 30.769 0.00 0.00 40.71 3.32
3249 7393 4.918810 ATGTCTCTTGTTTTCCACAACC 57.081 40.909 0.00 0.00 40.71 3.77
3250 7394 2.680841 TGTCTCTTGTTTTCCACAACCG 59.319 45.455 0.00 0.00 40.71 4.44
3251 7395 2.940410 GTCTCTTGTTTTCCACAACCGA 59.060 45.455 0.00 0.00 40.71 4.69
3252 7396 3.002348 GTCTCTTGTTTTCCACAACCGAG 59.998 47.826 0.00 0.00 40.71 4.63
3253 7397 2.290641 CTCTTGTTTTCCACAACCGAGG 59.709 50.000 0.00 0.00 40.71 4.63
3254 7398 2.092861 TCTTGTTTTCCACAACCGAGGA 60.093 45.455 0.00 0.00 40.71 3.71
3255 7399 2.649531 TGTTTTCCACAACCGAGGAT 57.350 45.000 0.00 0.00 31.35 3.24
3256 7400 2.938838 TGTTTTCCACAACCGAGGATT 58.061 42.857 0.00 0.00 31.35 3.01
3257 7401 4.088056 TGTTTTCCACAACCGAGGATTA 57.912 40.909 0.00 0.00 31.35 1.75
3258 7402 4.462133 TGTTTTCCACAACCGAGGATTAA 58.538 39.130 0.00 0.00 31.35 1.40
3259 7403 4.276431 TGTTTTCCACAACCGAGGATTAAC 59.724 41.667 0.00 0.00 31.35 2.01
3260 7404 3.773418 TTCCACAACCGAGGATTAACA 57.227 42.857 0.00 0.00 31.35 2.41
3261 7405 3.773418 TCCACAACCGAGGATTAACAA 57.227 42.857 0.00 0.00 0.00 2.83
3262 7406 3.670625 TCCACAACCGAGGATTAACAAG 58.329 45.455 0.00 0.00 0.00 3.16
3263 7407 3.325425 TCCACAACCGAGGATTAACAAGA 59.675 43.478 0.00 0.00 0.00 3.02
3264 7408 3.435671 CCACAACCGAGGATTAACAAGAC 59.564 47.826 0.00 0.00 0.00 3.01
3265 7409 3.435671 CACAACCGAGGATTAACAAGACC 59.564 47.826 0.00 0.00 0.00 3.85
3266 7410 2.667473 ACCGAGGATTAACAAGACCG 57.333 50.000 0.00 0.00 0.00 4.79
3267 7411 1.897802 ACCGAGGATTAACAAGACCGT 59.102 47.619 0.00 0.00 0.00 4.83
3268 7412 2.301009 ACCGAGGATTAACAAGACCGTT 59.699 45.455 0.00 0.00 0.00 4.44
3269 7413 3.511146 ACCGAGGATTAACAAGACCGTTA 59.489 43.478 0.00 0.00 0.00 3.18
3270 7414 3.861689 CCGAGGATTAACAAGACCGTTAC 59.138 47.826 0.00 0.00 31.19 2.50
3271 7415 4.487948 CGAGGATTAACAAGACCGTTACA 58.512 43.478 0.00 0.00 31.19 2.41
3272 7416 5.107133 CGAGGATTAACAAGACCGTTACAT 58.893 41.667 0.00 0.00 31.19 2.29
3273 7417 5.005394 CGAGGATTAACAAGACCGTTACATG 59.995 44.000 0.00 0.00 31.19 3.21
3274 7418 4.634443 AGGATTAACAAGACCGTTACATGC 59.366 41.667 0.00 0.00 31.19 4.06
3275 7419 4.393680 GGATTAACAAGACCGTTACATGCA 59.606 41.667 0.00 0.00 31.19 3.96
3276 7420 5.447279 GGATTAACAAGACCGTTACATGCAG 60.447 44.000 0.00 0.00 31.19 4.41
3277 7421 1.156736 ACAAGACCGTTACATGCAGC 58.843 50.000 0.00 0.00 0.00 5.25
3278 7422 1.270839 ACAAGACCGTTACATGCAGCT 60.271 47.619 0.00 0.00 0.00 4.24
3279 7423 1.806542 CAAGACCGTTACATGCAGCTT 59.193 47.619 0.00 0.00 0.00 3.74
3280 7424 1.726853 AGACCGTTACATGCAGCTTC 58.273 50.000 0.00 0.00 0.00 3.86
3281 7425 1.276421 AGACCGTTACATGCAGCTTCT 59.724 47.619 0.00 0.00 0.00 2.85
3282 7426 2.076863 GACCGTTACATGCAGCTTCTT 58.923 47.619 0.00 0.00 0.00 2.52
3283 7427 2.076863 ACCGTTACATGCAGCTTCTTC 58.923 47.619 0.00 0.00 0.00 2.87
3284 7428 2.076100 CCGTTACATGCAGCTTCTTCA 58.924 47.619 0.00 0.00 0.00 3.02
3285 7429 2.679837 CCGTTACATGCAGCTTCTTCAT 59.320 45.455 0.00 0.00 0.00 2.57
3286 7430 3.242543 CCGTTACATGCAGCTTCTTCATC 60.243 47.826 0.00 0.00 0.00 2.92
3287 7431 3.371898 CGTTACATGCAGCTTCTTCATCA 59.628 43.478 0.00 0.00 0.00 3.07
3288 7432 4.034858 CGTTACATGCAGCTTCTTCATCAT 59.965 41.667 0.00 0.00 0.00 2.45
3289 7433 5.448225 CGTTACATGCAGCTTCTTCATCATT 60.448 40.000 0.00 0.00 0.00 2.57
3290 7434 6.327934 GTTACATGCAGCTTCTTCATCATTT 58.672 36.000 0.00 0.00 0.00 2.32
3291 7435 4.995124 ACATGCAGCTTCTTCATCATTTC 58.005 39.130 0.00 0.00 0.00 2.17
3292 7436 3.752412 TGCAGCTTCTTCATCATTTCG 57.248 42.857 0.00 0.00 0.00 3.46
3293 7437 2.159476 TGCAGCTTCTTCATCATTTCGC 60.159 45.455 0.00 0.00 0.00 4.70
3294 7438 2.793933 GCAGCTTCTTCATCATTTCGCC 60.794 50.000 0.00 0.00 0.00 5.54
3295 7439 2.421073 CAGCTTCTTCATCATTTCGCCA 59.579 45.455 0.00 0.00 0.00 5.69
3296 7440 3.066342 CAGCTTCTTCATCATTTCGCCAT 59.934 43.478 0.00 0.00 0.00 4.40
3297 7441 3.698040 AGCTTCTTCATCATTTCGCCATT 59.302 39.130 0.00 0.00 0.00 3.16
3298 7442 4.159135 AGCTTCTTCATCATTTCGCCATTT 59.841 37.500 0.00 0.00 0.00 2.32
3299 7443 4.266976 GCTTCTTCATCATTTCGCCATTTG 59.733 41.667 0.00 0.00 0.00 2.32
3300 7444 3.772932 TCTTCATCATTTCGCCATTTGC 58.227 40.909 0.00 0.00 0.00 3.68
3301 7445 2.582728 TCATCATTTCGCCATTTGCC 57.417 45.000 0.00 0.00 36.24 4.52
3302 7446 1.202203 CATCATTTCGCCATTTGCCG 58.798 50.000 0.00 0.00 36.24 5.69
3303 7447 0.102844 ATCATTTCGCCATTTGCCGG 59.897 50.000 0.00 0.00 36.24 6.13
3304 7448 1.215117 CATTTCGCCATTTGCCGGT 59.785 52.632 1.90 0.00 36.24 5.28
3305 7449 1.077645 CATTTCGCCATTTGCCGGTG 61.078 55.000 1.90 0.00 36.24 4.94
3306 7450 1.531739 ATTTCGCCATTTGCCGGTGT 61.532 50.000 1.90 0.00 36.24 4.16
3307 7451 1.739338 TTTCGCCATTTGCCGGTGTT 61.739 50.000 1.90 0.00 36.24 3.32
3308 7452 0.889638 TTCGCCATTTGCCGGTGTTA 60.890 50.000 1.90 0.00 36.24 2.41
3309 7453 0.678366 TCGCCATTTGCCGGTGTTAT 60.678 50.000 1.90 0.00 36.24 1.89
3310 7454 0.172352 CGCCATTTGCCGGTGTTATT 59.828 50.000 1.90 0.00 36.24 1.40
3311 7455 1.403514 CGCCATTTGCCGGTGTTATTT 60.404 47.619 1.90 0.00 36.24 1.40
3312 7456 2.694213 GCCATTTGCCGGTGTTATTTT 58.306 42.857 1.90 0.00 0.00 1.82
3313 7457 3.070748 GCCATTTGCCGGTGTTATTTTT 58.929 40.909 1.90 0.00 0.00 1.94
3332 7476 5.440234 TTTTTATGTATGTGCGTTGGTGT 57.560 34.783 0.00 0.00 0.00 4.16
3333 7477 5.440234 TTTTATGTATGTGCGTTGGTGTT 57.560 34.783 0.00 0.00 0.00 3.32
3334 7478 2.987413 ATGTATGTGCGTTGGTGTTG 57.013 45.000 0.00 0.00 0.00 3.33
3335 7479 0.947960 TGTATGTGCGTTGGTGTTGG 59.052 50.000 0.00 0.00 0.00 3.77
3336 7480 1.231221 GTATGTGCGTTGGTGTTGGA 58.769 50.000 0.00 0.00 0.00 3.53
3337 7481 1.810151 GTATGTGCGTTGGTGTTGGAT 59.190 47.619 0.00 0.00 0.00 3.41
3338 7482 1.327303 ATGTGCGTTGGTGTTGGATT 58.673 45.000 0.00 0.00 0.00 3.01
3339 7483 0.665835 TGTGCGTTGGTGTTGGATTC 59.334 50.000 0.00 0.00 0.00 2.52
3340 7484 0.951558 GTGCGTTGGTGTTGGATTCT 59.048 50.000 0.00 0.00 0.00 2.40
3341 7485 2.147958 GTGCGTTGGTGTTGGATTCTA 58.852 47.619 0.00 0.00 0.00 2.10
3342 7486 2.550606 GTGCGTTGGTGTTGGATTCTAA 59.449 45.455 0.00 0.00 0.00 2.10
3343 7487 3.190535 GTGCGTTGGTGTTGGATTCTAAT 59.809 43.478 0.00 0.00 0.00 1.73
3344 7488 3.823873 TGCGTTGGTGTTGGATTCTAATT 59.176 39.130 0.00 0.00 0.00 1.40
3345 7489 5.004448 TGCGTTGGTGTTGGATTCTAATTA 58.996 37.500 0.00 0.00 0.00 1.40
3346 7490 5.106475 TGCGTTGGTGTTGGATTCTAATTAC 60.106 40.000 0.00 0.00 0.00 1.89
3347 7491 5.106475 GCGTTGGTGTTGGATTCTAATTACA 60.106 40.000 0.00 0.00 0.00 2.41
3348 7492 6.311723 CGTTGGTGTTGGATTCTAATTACAC 58.688 40.000 0.00 0.00 36.15 2.90
3349 7493 6.072948 CGTTGGTGTTGGATTCTAATTACACA 60.073 38.462 0.00 0.00 38.04 3.72
3350 7494 7.305474 GTTGGTGTTGGATTCTAATTACACAG 58.695 38.462 0.00 0.00 38.04 3.66
3351 7495 5.943416 TGGTGTTGGATTCTAATTACACAGG 59.057 40.000 0.00 0.00 38.04 4.00
3352 7496 5.357032 GGTGTTGGATTCTAATTACACAGGG 59.643 44.000 0.00 0.00 38.04 4.45
3353 7497 5.357032 GTGTTGGATTCTAATTACACAGGGG 59.643 44.000 0.00 0.00 36.71 4.79
3354 7498 4.788925 TGGATTCTAATTACACAGGGGG 57.211 45.455 0.00 0.00 0.00 5.40
3355 7499 4.116113 TGGATTCTAATTACACAGGGGGT 58.884 43.478 0.00 0.00 0.00 4.95
3356 7500 5.290335 TGGATTCTAATTACACAGGGGGTA 58.710 41.667 0.00 0.00 0.00 3.69
3357 7501 5.732170 TGGATTCTAATTACACAGGGGGTAA 59.268 40.000 0.00 0.00 35.40 2.85
3358 7502 6.391649 TGGATTCTAATTACACAGGGGGTAAT 59.608 38.462 0.00 0.00 41.80 1.89
3359 7503 6.715264 GGATTCTAATTACACAGGGGGTAATG 59.285 42.308 4.76 0.00 39.77 1.90
3360 7504 6.645884 TTCTAATTACACAGGGGGTAATGT 57.354 37.500 4.76 0.00 39.77 2.71
3361 7505 7.752518 TTCTAATTACACAGGGGGTAATGTA 57.247 36.000 4.76 0.83 39.77 2.29
3362 7506 7.941053 TCTAATTACACAGGGGGTAATGTAT 57.059 36.000 4.76 0.00 39.77 2.29
3363 7507 7.741785 TCTAATTACACAGGGGGTAATGTATG 58.258 38.462 4.76 0.00 39.77 2.39
3364 7508 5.987019 ATTACACAGGGGGTAATGTATGT 57.013 39.130 3.23 0.00 39.34 2.29
3365 7509 3.644966 ACACAGGGGGTAATGTATGTG 57.355 47.619 1.83 1.83 42.78 3.21
3366 7510 2.297701 CACAGGGGGTAATGTATGTGC 58.702 52.381 0.00 0.00 32.56 4.57
3367 7511 2.092429 CACAGGGGGTAATGTATGTGCT 60.092 50.000 0.00 0.00 32.56 4.40
3368 7512 2.172717 ACAGGGGGTAATGTATGTGCTC 59.827 50.000 0.00 0.00 0.00 4.26
3369 7513 2.172505 CAGGGGGTAATGTATGTGCTCA 59.827 50.000 0.00 0.00 0.00 4.26
3370 7514 3.056080 AGGGGGTAATGTATGTGCTCAT 58.944 45.455 6.50 6.50 38.00 2.90
3371 7515 3.463329 AGGGGGTAATGTATGTGCTCATT 59.537 43.478 6.57 2.44 37.85 2.57
3372 7516 3.569701 GGGGGTAATGTATGTGCTCATTG 59.430 47.826 6.57 0.00 36.06 2.82
3373 7517 4.207165 GGGGTAATGTATGTGCTCATTGT 58.793 43.478 6.57 0.00 36.06 2.71
3374 7518 4.036734 GGGGTAATGTATGTGCTCATTGTG 59.963 45.833 6.57 0.00 36.06 3.33
3375 7519 4.640201 GGGTAATGTATGTGCTCATTGTGT 59.360 41.667 6.57 0.00 36.06 3.72
3376 7520 5.125417 GGGTAATGTATGTGCTCATTGTGTT 59.875 40.000 6.57 1.09 36.06 3.32
3377 7521 6.350110 GGGTAATGTATGTGCTCATTGTGTTT 60.350 38.462 6.57 0.00 36.06 2.83
3378 7522 6.527722 GGTAATGTATGTGCTCATTGTGTTTG 59.472 38.462 6.57 0.00 36.06 2.93
3379 7523 5.710513 ATGTATGTGCTCATTGTGTTTGT 57.289 34.783 6.57 0.00 35.70 2.83
3380 7524 6.816134 ATGTATGTGCTCATTGTGTTTGTA 57.184 33.333 6.57 0.00 35.70 2.41
3381 7525 6.816134 TGTATGTGCTCATTGTGTTTGTAT 57.184 33.333 6.57 0.00 35.70 2.29
3382 7526 6.841119 TGTATGTGCTCATTGTGTTTGTATC 58.159 36.000 6.57 0.00 35.70 2.24
3383 7527 4.764679 TGTGCTCATTGTGTTTGTATCC 57.235 40.909 0.00 0.00 0.00 2.59
3384 7528 4.397420 TGTGCTCATTGTGTTTGTATCCT 58.603 39.130 0.00 0.00 0.00 3.24
3385 7529 4.455533 TGTGCTCATTGTGTTTGTATCCTC 59.544 41.667 0.00 0.00 0.00 3.71
3386 7530 4.697352 GTGCTCATTGTGTTTGTATCCTCT 59.303 41.667 0.00 0.00 0.00 3.69
3387 7531 4.937620 TGCTCATTGTGTTTGTATCCTCTC 59.062 41.667 0.00 0.00 0.00 3.20
3388 7532 4.937620 GCTCATTGTGTTTGTATCCTCTCA 59.062 41.667 0.00 0.00 0.00 3.27
3389 7533 5.412594 GCTCATTGTGTTTGTATCCTCTCAA 59.587 40.000 0.00 0.00 0.00 3.02
3390 7534 6.094603 GCTCATTGTGTTTGTATCCTCTCAAT 59.905 38.462 0.00 0.00 0.00 2.57
3391 7535 7.280876 GCTCATTGTGTTTGTATCCTCTCAATA 59.719 37.037 0.00 0.00 0.00 1.90
3392 7536 9.166173 CTCATTGTGTTTGTATCCTCTCAATAA 57.834 33.333 0.00 0.00 0.00 1.40
3393 7537 9.513906 TCATTGTGTTTGTATCCTCTCAATAAA 57.486 29.630 0.00 0.00 0.00 1.40
3437 7581 3.345508 CCAACTTGGTCCTTAGGTACC 57.654 52.381 2.73 2.73 36.24 3.34
3438 7582 2.026542 CCAACTTGGTCCTTAGGTACCC 60.027 54.545 8.74 7.24 34.69 3.69
3439 7583 2.640826 CAACTTGGTCCTTAGGTACCCA 59.359 50.000 8.74 9.34 34.69 4.51
3440 7584 3.216230 ACTTGGTCCTTAGGTACCCAT 57.784 47.619 8.74 0.00 34.69 4.00
3441 7585 3.113043 ACTTGGTCCTTAGGTACCCATC 58.887 50.000 8.74 0.00 34.69 3.51
3442 7586 3.246387 ACTTGGTCCTTAGGTACCCATCT 60.246 47.826 8.74 0.00 34.69 2.90
3443 7587 2.759355 TGGTCCTTAGGTACCCATCTG 58.241 52.381 8.74 0.00 34.69 2.90
3444 7588 2.047830 GGTCCTTAGGTACCCATCTGG 58.952 57.143 8.74 4.53 41.37 3.86
3445 7589 2.359994 GGTCCTTAGGTACCCATCTGGA 60.360 54.545 8.74 6.94 37.39 3.86
3446 7590 2.966516 GTCCTTAGGTACCCATCTGGAG 59.033 54.545 8.74 0.00 37.39 3.86
3447 7591 2.090719 TCCTTAGGTACCCATCTGGAGG 60.091 54.545 8.74 5.92 37.39 4.30
3448 7592 2.090719 CCTTAGGTACCCATCTGGAGGA 60.091 54.545 8.74 0.00 37.39 3.71
3449 7593 3.440154 CCTTAGGTACCCATCTGGAGGAT 60.440 52.174 8.74 0.00 37.39 3.24
3450 7594 2.897823 AGGTACCCATCTGGAGGATT 57.102 50.000 8.74 0.00 37.39 3.01
3451 7595 2.695585 AGGTACCCATCTGGAGGATTC 58.304 52.381 8.74 0.00 37.39 2.52
3452 7596 2.251338 AGGTACCCATCTGGAGGATTCT 59.749 50.000 8.74 0.00 37.39 2.40
3453 7597 2.370189 GGTACCCATCTGGAGGATTCTG 59.630 54.545 0.00 0.00 37.39 3.02
3454 7598 0.842635 ACCCATCTGGAGGATTCTGC 59.157 55.000 0.00 0.00 37.39 4.26
3455 7599 0.110104 CCCATCTGGAGGATTCTGCC 59.890 60.000 0.00 0.00 37.39 4.85
3456 7600 0.110104 CCATCTGGAGGATTCTGCCC 59.890 60.000 0.00 0.00 37.39 5.36
3457 7601 0.841961 CATCTGGAGGATTCTGCCCA 59.158 55.000 0.00 0.00 31.27 5.36
3458 7602 0.842635 ATCTGGAGGATTCTGCCCAC 59.157 55.000 0.00 0.00 0.00 4.61
3459 7603 1.225704 CTGGAGGATTCTGCCCACC 59.774 63.158 0.00 0.00 0.00 4.61
3460 7604 2.276309 CTGGAGGATTCTGCCCACCC 62.276 65.000 0.00 0.00 0.00 4.61
3461 7605 2.003548 GGAGGATTCTGCCCACCCT 61.004 63.158 0.00 0.00 0.00 4.34
3462 7606 1.225704 GAGGATTCTGCCCACCCTG 59.774 63.158 0.00 0.00 0.00 4.45
3463 7607 2.440980 GGATTCTGCCCACCCTGC 60.441 66.667 0.00 0.00 0.00 4.85
3464 7608 2.440980 GATTCTGCCCACCCTGCC 60.441 66.667 0.00 0.00 0.00 4.85
3465 7609 4.431131 ATTCTGCCCACCCTGCCG 62.431 66.667 0.00 0.00 0.00 5.69
3484 7628 3.372730 GGCGCAATTGTGGCTGGA 61.373 61.111 31.61 0.00 46.05 3.86
3485 7629 2.126346 GCGCAATTGTGGCTGGAC 60.126 61.111 20.04 0.00 0.00 4.02
3486 7630 2.568090 CGCAATTGTGGCTGGACC 59.432 61.111 11.28 0.00 39.84 4.46
3494 7638 3.160585 TGGCTGGACCAGGTTCTG 58.839 61.111 23.09 0.00 46.36 3.02
3495 7639 1.770110 TGGCTGGACCAGGTTCTGT 60.770 57.895 23.09 0.00 46.36 3.41
3496 7640 1.352622 TGGCTGGACCAGGTTCTGTT 61.353 55.000 23.09 0.00 46.36 3.16
3497 7641 0.890996 GGCTGGACCAGGTTCTGTTG 60.891 60.000 23.09 0.00 38.86 3.33
3498 7642 0.890996 GCTGGACCAGGTTCTGTTGG 60.891 60.000 23.09 0.00 40.38 3.77
3499 7643 0.890996 CTGGACCAGGTTCTGTTGGC 60.891 60.000 14.26 0.00 38.03 4.52
3500 7644 1.352622 TGGACCAGGTTCTGTTGGCT 61.353 55.000 0.00 0.00 38.03 4.75
3501 7645 0.178990 GGACCAGGTTCTGTTGGCTT 60.179 55.000 0.00 0.00 38.03 4.35
3502 7646 1.692411 GACCAGGTTCTGTTGGCTTT 58.308 50.000 0.00 0.00 38.03 3.51
3503 7647 2.031870 GACCAGGTTCTGTTGGCTTTT 58.968 47.619 0.00 0.00 38.03 2.27
3504 7648 2.031870 ACCAGGTTCTGTTGGCTTTTC 58.968 47.619 0.00 0.00 38.03 2.29
3505 7649 2.031120 CCAGGTTCTGTTGGCTTTTCA 58.969 47.619 0.00 0.00 0.00 2.69
3506 7650 2.430332 CCAGGTTCTGTTGGCTTTTCAA 59.570 45.455 0.00 0.00 0.00 2.69
3507 7651 3.447742 CAGGTTCTGTTGGCTTTTCAAC 58.552 45.455 0.00 0.00 45.13 3.18
3508 7652 3.131046 CAGGTTCTGTTGGCTTTTCAACT 59.869 43.478 8.80 0.00 45.15 3.16
3509 7653 3.769300 AGGTTCTGTTGGCTTTTCAACTT 59.231 39.130 8.80 0.00 45.15 2.66
3510 7654 4.953579 AGGTTCTGTTGGCTTTTCAACTTA 59.046 37.500 8.80 0.00 45.15 2.24
3511 7655 5.420739 AGGTTCTGTTGGCTTTTCAACTTAA 59.579 36.000 8.80 1.77 45.15 1.85
3512 7656 5.748630 GGTTCTGTTGGCTTTTCAACTTAAG 59.251 40.000 0.00 0.00 45.15 1.85
3513 7657 6.330278 GTTCTGTTGGCTTTTCAACTTAAGT 58.670 36.000 1.12 1.12 45.15 2.24
3514 7658 6.524101 TCTGTTGGCTTTTCAACTTAAGTT 57.476 33.333 15.22 15.22 45.15 2.66
3515 7659 6.930731 TCTGTTGGCTTTTCAACTTAAGTTT 58.069 32.000 18.25 1.50 45.15 2.66
3516 7660 7.382898 TCTGTTGGCTTTTCAACTTAAGTTTT 58.617 30.769 18.25 0.00 45.15 2.43
3517 7661 8.524487 TCTGTTGGCTTTTCAACTTAAGTTTTA 58.476 29.630 18.25 7.06 45.15 1.52
3518 7662 9.313118 CTGTTGGCTTTTCAACTTAAGTTTTAT 57.687 29.630 18.25 0.00 45.15 1.40
3522 7666 9.738832 TGGCTTTTCAACTTAAGTTTTATACAC 57.261 29.630 18.25 7.95 35.83 2.90
3523 7667 9.961265 GGCTTTTCAACTTAAGTTTTATACACT 57.039 29.630 18.25 0.00 35.83 3.55
3536 7680 9.677567 AAGTTTTATACACTAACTTGCACATTG 57.322 29.630 0.00 0.00 39.79 2.82
3537 7681 9.062524 AGTTTTATACACTAACTTGCACATTGA 57.937 29.630 0.00 0.00 0.00 2.57
3538 7682 9.840427 GTTTTATACACTAACTTGCACATTGAT 57.160 29.630 0.00 0.00 0.00 2.57
3542 7686 8.746922 ATACACTAACTTGCACATTGATTTTG 57.253 30.769 0.00 0.00 0.00 2.44
3543 7687 6.572519 ACACTAACTTGCACATTGATTTTGT 58.427 32.000 0.00 0.00 0.00 2.83
3544 7688 7.041107 ACACTAACTTGCACATTGATTTTGTT 58.959 30.769 0.00 0.00 0.00 2.83
3545 7689 7.548780 ACACTAACTTGCACATTGATTTTGTTT 59.451 29.630 0.00 0.00 0.00 2.83
3546 7690 8.057742 CACTAACTTGCACATTGATTTTGTTTC 58.942 33.333 0.00 0.00 0.00 2.78
3547 7691 5.640218 ACTTGCACATTGATTTTGTTTCG 57.360 34.783 0.00 0.00 0.00 3.46
3548 7692 4.507388 ACTTGCACATTGATTTTGTTTCGG 59.493 37.500 0.00 0.00 0.00 4.30
3549 7693 4.052159 TGCACATTGATTTTGTTTCGGT 57.948 36.364 0.00 0.00 0.00 4.69
3550 7694 4.437239 TGCACATTGATTTTGTTTCGGTT 58.563 34.783 0.00 0.00 0.00 4.44
3551 7695 4.872691 TGCACATTGATTTTGTTTCGGTTT 59.127 33.333 0.00 0.00 0.00 3.27
3552 7696 5.196825 GCACATTGATTTTGTTTCGGTTTG 58.803 37.500 0.00 0.00 0.00 2.93
3553 7697 5.220567 GCACATTGATTTTGTTTCGGTTTGT 60.221 36.000 0.00 0.00 0.00 2.83
3554 7698 6.674278 GCACATTGATTTTGTTTCGGTTTGTT 60.674 34.615 0.00 0.00 0.00 2.83
3555 7699 6.682020 CACATTGATTTTGTTTCGGTTTGTTG 59.318 34.615 0.00 0.00 0.00 3.33
3556 7700 6.370166 ACATTGATTTTGTTTCGGTTTGTTGT 59.630 30.769 0.00 0.00 0.00 3.32
3557 7701 6.396459 TTGATTTTGTTTCGGTTTGTTGTC 57.604 33.333 0.00 0.00 0.00 3.18
3558 7702 5.715070 TGATTTTGTTTCGGTTTGTTGTCT 58.285 33.333 0.00 0.00 0.00 3.41
3559 7703 6.853720 TGATTTTGTTTCGGTTTGTTGTCTA 58.146 32.000 0.00 0.00 0.00 2.59
3560 7704 7.484975 TGATTTTGTTTCGGTTTGTTGTCTAT 58.515 30.769 0.00 0.00 0.00 1.98
3561 7705 8.622157 TGATTTTGTTTCGGTTTGTTGTCTATA 58.378 29.630 0.00 0.00 0.00 1.31
3562 7706 9.620660 GATTTTGTTTCGGTTTGTTGTCTATAT 57.379 29.630 0.00 0.00 0.00 0.86
3563 7707 9.974980 ATTTTGTTTCGGTTTGTTGTCTATATT 57.025 25.926 0.00 0.00 0.00 1.28
3564 7708 9.804758 TTTTGTTTCGGTTTGTTGTCTATATTT 57.195 25.926 0.00 0.00 0.00 1.40
3565 7709 9.804758 TTTGTTTCGGTTTGTTGTCTATATTTT 57.195 25.926 0.00 0.00 0.00 1.82
3566 7710 9.453325 TTGTTTCGGTTTGTTGTCTATATTTTC 57.547 29.630 0.00 0.00 0.00 2.29
3567 7711 8.622157 TGTTTCGGTTTGTTGTCTATATTTTCA 58.378 29.630 0.00 0.00 0.00 2.69
3568 7712 9.620660 GTTTCGGTTTGTTGTCTATATTTTCAT 57.379 29.630 0.00 0.00 0.00 2.57
3572 7716 9.221775 CGGTTTGTTGTCTATATTTTCATAAGC 57.778 33.333 0.00 0.00 0.00 3.09
3573 7717 9.221775 GGTTTGTTGTCTATATTTTCATAAGCG 57.778 33.333 0.00 0.00 0.00 4.68
3574 7718 9.769093 GTTTGTTGTCTATATTTTCATAAGCGT 57.231 29.630 0.00 0.00 0.00 5.07
3576 7720 9.767684 TTGTTGTCTATATTTTCATAAGCGTTG 57.232 29.630 0.00 0.00 0.00 4.10
3577 7721 8.941977 TGTTGTCTATATTTTCATAAGCGTTGT 58.058 29.630 0.00 0.00 0.00 3.32
3580 7724 9.589111 TGTCTATATTTTCATAAGCGTTGTACA 57.411 29.630 0.00 0.00 0.00 2.90
3587 7731 7.541743 TTTCATAAGCGTTGTACATTTTTCG 57.458 32.000 0.00 0.00 0.00 3.46
3588 7732 6.230849 TCATAAGCGTTGTACATTTTTCGT 57.769 33.333 0.00 0.00 0.00 3.85
3589 7733 7.348808 TCATAAGCGTTGTACATTTTTCGTA 57.651 32.000 0.00 0.00 0.00 3.43
3590 7734 7.966111 TCATAAGCGTTGTACATTTTTCGTAT 58.034 30.769 0.00 0.00 0.00 3.06
3591 7735 9.085250 TCATAAGCGTTGTACATTTTTCGTATA 57.915 29.630 0.00 0.00 0.00 1.47
3592 7736 9.858247 CATAAGCGTTGTACATTTTTCGTATAT 57.142 29.630 0.00 0.00 0.00 0.86
3594 7738 6.633683 AGCGTTGTACATTTTTCGTATATCG 58.366 36.000 0.00 0.00 41.41 2.92
3673 7817 8.659925 ACATTTTTGCAGAATACATGTTTTCA 57.340 26.923 24.84 7.96 0.00 2.69
3674 7818 9.275398 ACATTTTTGCAGAATACATGTTTTCAT 57.725 25.926 24.84 11.57 41.78 2.57
3692 7836 9.255304 TGTTTTCATGCTTACTTTTGTTTATCC 57.745 29.630 0.00 0.00 0.00 2.59
3693 7837 9.255304 GTTTTCATGCTTACTTTTGTTTATCCA 57.745 29.630 0.00 0.00 0.00 3.41
3694 7838 9.995003 TTTTCATGCTTACTTTTGTTTATCCAT 57.005 25.926 0.00 0.00 0.00 3.41
3695 7839 9.995003 TTTCATGCTTACTTTTGTTTATCCATT 57.005 25.926 0.00 0.00 0.00 3.16
3696 7840 9.638239 TTCATGCTTACTTTTGTTTATCCATTC 57.362 29.630 0.00 0.00 0.00 2.67
3697 7841 9.023962 TCATGCTTACTTTTGTTTATCCATTCT 57.976 29.630 0.00 0.00 0.00 2.40
3700 7844 9.515226 TGCTTACTTTTGTTTATCCATTCTACT 57.485 29.630 0.00 0.00 0.00 2.57
3760 7904 9.645059 TTTAACACTTTTCAACATGATTTCACA 57.355 25.926 0.00 0.00 0.00 3.58
3761 7905 9.814899 TTAACACTTTTCAACATGATTTCACAT 57.185 25.926 0.00 0.00 0.00 3.21
3762 7906 8.721019 AACACTTTTCAACATGATTTCACATT 57.279 26.923 0.00 0.00 0.00 2.71
3763 7907 8.721019 ACACTTTTCAACATGATTTCACATTT 57.279 26.923 0.00 0.00 0.00 2.32
3764 7908 9.165035 ACACTTTTCAACATGATTTCACATTTT 57.835 25.926 0.00 0.00 0.00 1.82
3765 7909 9.640974 CACTTTTCAACATGATTTCACATTTTC 57.359 29.630 0.00 0.00 0.00 2.29
3766 7910 9.603921 ACTTTTCAACATGATTTCACATTTTCT 57.396 25.926 0.00 0.00 0.00 2.52
3801 7945 9.376075 TGTGTTTGACATATTTTTCAAATGTGT 57.624 25.926 10.35 10.35 42.24 3.72
3807 7951 9.202273 TGACATATTTTTCAAATGTGTTAAGCC 57.798 29.630 11.47 2.15 34.09 4.35
3808 7952 9.423061 GACATATTTTTCAAATGTGTTAAGCCT 57.577 29.630 11.47 0.00 34.09 4.58
3809 7953 9.777297 ACATATTTTTCAAATGTGTTAAGCCTT 57.223 25.926 5.94 0.00 32.74 4.35
3814 7958 8.553459 TTTTCAAATGTGTTAAGCCTTTTTCA 57.447 26.923 0.00 0.00 0.00 2.69
3815 7959 8.553459 TTTCAAATGTGTTAAGCCTTTTTCAA 57.447 26.923 0.00 0.00 0.00 2.69
3816 7960 8.553459 TTCAAATGTGTTAAGCCTTTTTCAAA 57.447 26.923 0.00 0.00 0.00 2.69
3817 7961 8.729805 TCAAATGTGTTAAGCCTTTTTCAAAT 57.270 26.923 0.00 0.00 0.00 2.32
3818 7962 8.610896 TCAAATGTGTTAAGCCTTTTTCAAATG 58.389 29.630 0.00 0.00 0.00 2.32
3819 7963 5.982465 TGTGTTAAGCCTTTTTCAAATGC 57.018 34.783 0.00 0.00 0.00 3.56
3820 7964 5.423015 TGTGTTAAGCCTTTTTCAAATGCA 58.577 33.333 0.00 0.00 0.00 3.96
3821 7965 5.293079 TGTGTTAAGCCTTTTTCAAATGCAC 59.707 36.000 0.00 0.00 0.00 4.57
3822 7966 4.813697 TGTTAAGCCTTTTTCAAATGCACC 59.186 37.500 0.00 0.00 0.00 5.01
3823 7967 3.843893 AAGCCTTTTTCAAATGCACCT 57.156 38.095 0.00 0.00 0.00 4.00
3824 7968 3.843893 AGCCTTTTTCAAATGCACCTT 57.156 38.095 0.00 0.00 0.00 3.50
3825 7969 3.469739 AGCCTTTTTCAAATGCACCTTG 58.530 40.909 4.33 4.33 0.00 3.61
3826 7970 2.031769 GCCTTTTTCAAATGCACCTTGC 60.032 45.455 5.64 0.00 45.29 4.01
3904 8048 9.766277 TTTACTTTTGTGCAATTTGAAAATGTC 57.234 25.926 0.00 0.00 0.00 3.06
3905 8049 7.375106 ACTTTTGTGCAATTTGAAAATGTCA 57.625 28.000 0.00 0.00 0.00 3.58
3906 8050 7.242783 ACTTTTGTGCAATTTGAAAATGTCAC 58.757 30.769 0.00 11.13 35.39 3.67
3907 8051 5.731599 TTGTGCAATTTGAAAATGTCACC 57.268 34.783 13.75 2.90 35.39 4.02
3908 8052 4.763073 TGTGCAATTTGAAAATGTCACCA 58.237 34.783 13.75 4.61 35.39 4.17
3909 8053 5.181009 TGTGCAATTTGAAAATGTCACCAA 58.819 33.333 13.75 0.00 35.39 3.67
3910 8054 5.064452 TGTGCAATTTGAAAATGTCACCAAC 59.936 36.000 13.75 0.00 35.39 3.77
3911 8055 5.064452 GTGCAATTTGAAAATGTCACCAACA 59.936 36.000 0.00 0.00 43.51 3.33
3912 8056 5.064452 TGCAATTTGAAAATGTCACCAACAC 59.936 36.000 0.00 0.00 41.75 3.32
3913 8057 5.064452 GCAATTTGAAAATGTCACCAACACA 59.936 36.000 0.00 0.00 41.75 3.72
3914 8058 6.238429 GCAATTTGAAAATGTCACCAACACAT 60.238 34.615 0.00 0.00 41.75 3.21
3915 8059 7.679164 GCAATTTGAAAATGTCACCAACACATT 60.679 33.333 0.00 0.00 44.67 2.71
3924 8068 8.419076 AATGTCACCAACACATTTTTAAACTC 57.581 30.769 0.00 0.00 40.83 3.01
3925 8069 6.030849 TGTCACCAACACATTTTTAAACTCG 58.969 36.000 0.00 0.00 31.20 4.18
3926 8070 6.031471 GTCACCAACACATTTTTAAACTCGT 58.969 36.000 0.00 0.00 0.00 4.18
3927 8071 6.020995 GTCACCAACACATTTTTAAACTCGTG 60.021 38.462 7.99 7.99 0.00 4.35
3928 8072 6.030849 CACCAACACATTTTTAAACTCGTGA 58.969 36.000 13.98 0.00 0.00 4.35
3929 8073 6.528423 CACCAACACATTTTTAAACTCGTGAA 59.472 34.615 13.98 0.00 0.00 3.18
3930 8074 6.750039 ACCAACACATTTTTAAACTCGTGAAG 59.250 34.615 13.98 7.68 0.00 3.02
3931 8075 6.970043 CCAACACATTTTTAAACTCGTGAAGA 59.030 34.615 13.98 0.00 0.00 2.87
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 37 1.665679 ACGCACAATTCCGATGACATC 59.334 47.619 5.28 5.28 0.00 3.06
59 61 2.009681 TGGTTCTACTGGCACTGAGA 57.990 50.000 0.00 0.00 0.00 3.27
214 220 1.134431 CCAAATTAACCATGGGCTGCC 60.134 52.381 18.09 11.05 0.00 4.85
252 267 4.207955 ACAATCGAGGATGCTACTACTCA 58.792 43.478 0.00 0.00 0.00 3.41
254 269 6.710597 TTAACAATCGAGGATGCTACTACT 57.289 37.500 0.00 0.00 0.00 2.57
255 270 7.095607 CCAATTAACAATCGAGGATGCTACTAC 60.096 40.741 0.00 0.00 0.00 2.73
256 271 6.929049 CCAATTAACAATCGAGGATGCTACTA 59.071 38.462 0.00 0.00 0.00 1.82
289 304 4.381079 GGTTAAAGCCGAAAATGCCATGTA 60.381 41.667 0.00 0.00 0.00 2.29
295 310 3.584834 ACATGGTTAAAGCCGAAAATGC 58.415 40.909 0.00 0.00 0.00 3.56
300 315 4.015872 AGAAGACATGGTTAAAGCCGAA 57.984 40.909 0.00 0.00 0.00 4.30
366 384 2.738643 CGCATTACTGTCCAACCGAGAT 60.739 50.000 0.00 0.00 0.00 2.75
367 385 1.403647 CGCATTACTGTCCAACCGAGA 60.404 52.381 0.00 0.00 0.00 4.04
438 456 4.028187 GTCTAAAACATAACCTACGCGACG 60.028 45.833 15.93 2.11 0.00 5.12
558 578 3.713288 TCAATTCCCTGCTTACGTATCG 58.287 45.455 0.00 0.00 0.00 2.92
570 592 7.595819 TTGTCAAACAATACTTCAATTCCCT 57.404 32.000 0.00 0.00 32.34 4.20
599 621 1.202879 ACAACAGATCTTTTGGGCCGA 60.203 47.619 22.27 0.00 0.00 5.54
605 627 5.568482 TCGTGTCAAACAACAGATCTTTTG 58.432 37.500 18.02 18.02 0.00 2.44
645 667 4.141344 TGCCTTAACTTTGTGGTTAGACCT 60.141 41.667 0.00 0.00 39.58 3.85
729 757 4.033776 CGGGCCTGGTCCATGTGT 62.034 66.667 19.08 0.00 0.00 3.72
754 782 0.467804 GAGCAAGGAGAGGGTCATCC 59.532 60.000 0.00 0.00 35.71 3.51
755 783 0.467804 GGAGCAAGGAGAGGGTCATC 59.532 60.000 0.00 0.00 33.35 2.92
756 784 0.043940 AGGAGCAAGGAGAGGGTCAT 59.956 55.000 0.00 0.00 33.35 3.06
770 803 2.294449 AAAGGGAAGGTCAAAGGAGC 57.706 50.000 0.00 0.00 41.86 4.70
784 817 4.398598 CGCGCGTTCCCAAAAGGG 62.399 66.667 24.19 0.00 35.67 3.95
809 842 3.339464 CGTGCGGTGGTGCGTTTA 61.339 61.111 0.00 0.00 37.81 2.01
959 996 2.567169 TGGCTCTAGCTAAGCTGTTGAA 59.433 45.455 20.14 4.92 40.10 2.69
992 1029 1.378250 GAGAGCACCATGGCTGCTT 60.378 57.895 30.08 22.62 45.23 3.91
1093 1136 1.677576 CAAGAACAACAAGCAGGCAGA 59.322 47.619 0.00 0.00 0.00 4.26
1113 1162 2.522638 CGTTAGGCCGGCGATGAAC 61.523 63.158 22.54 18.99 0.00 3.18
1129 1178 0.108615 CTCCTCGAAGAACATGCCGT 60.109 55.000 0.00 0.00 34.09 5.68
1130 1179 0.108615 ACTCCTCGAAGAACATGCCG 60.109 55.000 0.00 0.00 34.09 5.69
1131 1180 2.961526 TACTCCTCGAAGAACATGCC 57.038 50.000 0.00 0.00 34.09 4.40
1181 1270 2.184322 GAGTTCTCCGGCATGCGA 59.816 61.111 12.44 3.12 0.00 5.10
1385 1474 1.914700 CGAAGCAGAGAGACTTAACGC 59.085 52.381 0.00 0.00 0.00 4.84
1697 4539 2.587522 GAGGCAGAGGGTTGTTTTTCT 58.412 47.619 0.00 0.00 0.00 2.52
1699 4541 1.318576 CGAGGCAGAGGGTTGTTTTT 58.681 50.000 0.00 0.00 0.00 1.94
1727 4569 7.220030 TGTTTCAATTCTTAGCTCTCAGTTCT 58.780 34.615 0.00 0.00 0.00 3.01
1747 4592 7.326063 GCACACCTACATCAGTTTAAATGTTTC 59.674 37.037 0.00 0.00 37.33 2.78
1994 5070 2.420372 CTCTGCTCTGCTCTTGTACGTA 59.580 50.000 0.00 0.00 0.00 3.57
1997 5073 1.067283 TGCTCTGCTCTGCTCTTGTAC 60.067 52.381 0.00 0.00 0.00 2.90
1998 5074 1.204231 CTGCTCTGCTCTGCTCTTGTA 59.796 52.381 0.00 0.00 0.00 2.41
2000 5076 1.363145 GCTGCTCTGCTCTGCTCTTG 61.363 60.000 0.00 0.00 0.00 3.02
2001 5077 1.078988 GCTGCTCTGCTCTGCTCTT 60.079 57.895 0.00 0.00 0.00 2.85
2002 5078 2.580276 GCTGCTCTGCTCTGCTCT 59.420 61.111 0.00 0.00 0.00 4.09
2003 5079 2.512057 GGCTGCTCTGCTCTGCTC 60.512 66.667 0.00 0.00 0.00 4.26
2004 5080 4.454319 CGGCTGCTCTGCTCTGCT 62.454 66.667 0.00 0.00 0.00 4.24
2310 5419 1.625818 GAGCCCTTGGAGAAGTTGAGA 59.374 52.381 0.00 0.00 0.00 3.27
2391 5500 1.439228 CTGTCCTGATCGATGCGGT 59.561 57.895 0.54 0.00 0.00 5.68
2393 5502 0.318529 CTCCTGTCCTGATCGATGCG 60.319 60.000 0.54 0.00 0.00 4.73
2394 5503 0.033228 CCTCCTGTCCTGATCGATGC 59.967 60.000 0.54 0.00 0.00 3.91
2395 5504 1.697284 TCCTCCTGTCCTGATCGATG 58.303 55.000 0.54 0.00 0.00 3.84
2403 5630 2.922283 ACCAAATGAATCCTCCTGTCCT 59.078 45.455 0.00 0.00 0.00 3.85
2407 5634 5.509498 TCCTTTACCAAATGAATCCTCCTG 58.491 41.667 0.00 0.00 0.00 3.86
2408 5635 5.760131 CTCCTTTACCAAATGAATCCTCCT 58.240 41.667 0.00 0.00 0.00 3.69
2409 5636 4.339530 GCTCCTTTACCAAATGAATCCTCC 59.660 45.833 0.00 0.00 0.00 4.30
2412 5639 4.949856 TCAGCTCCTTTACCAAATGAATCC 59.050 41.667 0.00 0.00 0.00 3.01
2413 5640 5.415701 TGTCAGCTCCTTTACCAAATGAATC 59.584 40.000 0.00 0.00 0.00 2.52
2427 5658 2.130272 TGTAGATCGTGTCAGCTCCT 57.870 50.000 0.00 0.00 0.00 3.69
2428 5659 2.287909 GGATGTAGATCGTGTCAGCTCC 60.288 54.545 0.00 0.00 0.00 4.70
2434 5665 7.060748 CGTTATTGTATGGATGTAGATCGTGTC 59.939 40.741 0.00 0.00 0.00 3.67
2442 5673 4.690748 CCCTGCGTTATTGTATGGATGTAG 59.309 45.833 0.00 0.00 0.00 2.74
2443 5674 4.504165 CCCCTGCGTTATTGTATGGATGTA 60.504 45.833 0.00 0.00 0.00 2.29
2445 5676 2.813754 CCCCTGCGTTATTGTATGGATG 59.186 50.000 0.00 0.00 0.00 3.51
2446 5677 2.441750 ACCCCTGCGTTATTGTATGGAT 59.558 45.455 0.00 0.00 0.00 3.41
2447 5678 1.841277 ACCCCTGCGTTATTGTATGGA 59.159 47.619 0.00 0.00 0.00 3.41
2448 5679 2.341846 ACCCCTGCGTTATTGTATGG 57.658 50.000 0.00 0.00 0.00 2.74
2449 5680 3.799366 TGTACCCCTGCGTTATTGTATG 58.201 45.455 0.00 0.00 0.00 2.39
2451 5682 2.168936 CCTGTACCCCTGCGTTATTGTA 59.831 50.000 0.00 0.00 0.00 2.41
2925 6702 1.896660 GCCGTTGGTCTTCTTGGCA 60.897 57.895 0.00 0.00 42.03 4.92
2957 7081 3.909732 TGGGTTTTGGAGACTGTTGATT 58.090 40.909 0.00 0.00 0.00 2.57
3044 7186 4.094442 GGTTACAAACTCGGCCTAAATCAG 59.906 45.833 0.00 0.00 0.00 2.90
3100 7242 1.020861 TACCATCACTGCAGCGCAAG 61.021 55.000 15.27 6.71 38.41 4.01
3152 7296 7.933033 ACAGAAAATAACCATCACTGCATTTTT 59.067 29.630 0.00 0.00 0.00 1.94
3153 7297 7.444299 ACAGAAAATAACCATCACTGCATTTT 58.556 30.769 0.00 0.00 0.00 1.82
3154 7298 6.996509 ACAGAAAATAACCATCACTGCATTT 58.003 32.000 0.00 0.00 0.00 2.32
3155 7299 6.594788 ACAGAAAATAACCATCACTGCATT 57.405 33.333 0.00 0.00 0.00 3.56
3156 7300 6.594788 AACAGAAAATAACCATCACTGCAT 57.405 33.333 0.00 0.00 0.00 3.96
3157 7301 7.517614 TTAACAGAAAATAACCATCACTGCA 57.482 32.000 0.00 0.00 0.00 4.41
3158 7302 8.810652 TTTTAACAGAAAATAACCATCACTGC 57.189 30.769 0.00 0.00 0.00 4.40
3160 7304 9.927668 CCATTTTAACAGAAAATAACCATCACT 57.072 29.630 0.00 0.00 0.00 3.41
3161 7305 9.705290 ACCATTTTAACAGAAAATAACCATCAC 57.295 29.630 0.00 0.00 0.00 3.06
3165 7309 9.757227 CAGAACCATTTTAACAGAAAATAACCA 57.243 29.630 0.00 0.00 0.00 3.67
3166 7310 8.708742 GCAGAACCATTTTAACAGAAAATAACC 58.291 33.333 0.00 0.00 0.00 2.85
3167 7311 9.255304 TGCAGAACCATTTTAACAGAAAATAAC 57.745 29.630 0.00 0.00 0.00 1.89
3168 7312 9.823647 TTGCAGAACCATTTTAACAGAAAATAA 57.176 25.926 0.00 0.00 0.00 1.40
3169 7313 9.823647 TTTGCAGAACCATTTTAACAGAAAATA 57.176 25.926 0.00 0.00 0.00 1.40
3170 7314 8.729805 TTTGCAGAACCATTTTAACAGAAAAT 57.270 26.923 0.00 0.00 0.00 1.82
3171 7315 8.729805 ATTTGCAGAACCATTTTAACAGAAAA 57.270 26.923 0.00 0.00 0.00 2.29
3172 7316 8.729805 AATTTGCAGAACCATTTTAACAGAAA 57.270 26.923 0.00 0.00 0.00 2.52
3173 7317 8.729805 AAATTTGCAGAACCATTTTAACAGAA 57.270 26.923 0.00 0.00 0.00 3.02
3174 7318 9.995003 ATAAATTTGCAGAACCATTTTAACAGA 57.005 25.926 0.00 0.00 0.00 3.41
3223 7367 7.762159 GGTTGTGGAAAACAAGAGACATAAAAA 59.238 33.333 0.00 0.00 44.97 1.94
3224 7368 7.262048 GGTTGTGGAAAACAAGAGACATAAAA 58.738 34.615 0.00 0.00 44.97 1.52
3225 7369 6.459024 CGGTTGTGGAAAACAAGAGACATAAA 60.459 38.462 0.00 0.00 44.97 1.40
3226 7370 5.008217 CGGTTGTGGAAAACAAGAGACATAA 59.992 40.000 0.00 0.00 44.97 1.90
3227 7371 4.513692 CGGTTGTGGAAAACAAGAGACATA 59.486 41.667 0.00 0.00 44.97 2.29
3228 7372 3.315191 CGGTTGTGGAAAACAAGAGACAT 59.685 43.478 0.00 0.00 44.97 3.06
3229 7373 2.680841 CGGTTGTGGAAAACAAGAGACA 59.319 45.455 0.00 0.00 44.97 3.41
3230 7374 2.940410 TCGGTTGTGGAAAACAAGAGAC 59.060 45.455 0.00 0.00 44.97 3.36
3231 7375 3.202906 CTCGGTTGTGGAAAACAAGAGA 58.797 45.455 2.84 0.61 44.97 3.10
3232 7376 2.290641 CCTCGGTTGTGGAAAACAAGAG 59.709 50.000 0.00 0.00 44.97 2.85
3233 7377 2.092861 TCCTCGGTTGTGGAAAACAAGA 60.093 45.455 0.00 0.00 44.97 3.02
3234 7378 2.294074 TCCTCGGTTGTGGAAAACAAG 58.706 47.619 0.00 0.00 44.97 3.16
3235 7379 2.421751 TCCTCGGTTGTGGAAAACAA 57.578 45.000 0.00 0.00 44.97 2.83
3236 7380 2.649531 ATCCTCGGTTGTGGAAAACA 57.350 45.000 0.00 0.00 40.90 2.83
3237 7381 4.276431 TGTTAATCCTCGGTTGTGGAAAAC 59.724 41.667 0.00 0.00 40.90 2.43
3238 7382 4.462133 TGTTAATCCTCGGTTGTGGAAAA 58.538 39.130 0.00 0.00 40.90 2.29
3239 7383 4.088056 TGTTAATCCTCGGTTGTGGAAA 57.912 40.909 0.00 0.00 40.90 3.13
3240 7384 3.773418 TGTTAATCCTCGGTTGTGGAA 57.227 42.857 0.00 0.00 40.90 3.53
3241 7385 3.325425 TCTTGTTAATCCTCGGTTGTGGA 59.675 43.478 0.00 0.00 41.71 4.02
3242 7386 3.435671 GTCTTGTTAATCCTCGGTTGTGG 59.564 47.826 0.00 0.00 0.00 4.17
3243 7387 3.435671 GGTCTTGTTAATCCTCGGTTGTG 59.564 47.826 0.00 0.00 0.00 3.33
3244 7388 3.671716 GGTCTTGTTAATCCTCGGTTGT 58.328 45.455 0.00 0.00 0.00 3.32
3245 7389 2.671396 CGGTCTTGTTAATCCTCGGTTG 59.329 50.000 0.00 0.00 0.00 3.77
3246 7390 2.301009 ACGGTCTTGTTAATCCTCGGTT 59.699 45.455 0.00 0.00 0.00 4.44
3247 7391 1.897802 ACGGTCTTGTTAATCCTCGGT 59.102 47.619 0.00 0.00 0.00 4.69
3248 7392 2.667473 ACGGTCTTGTTAATCCTCGG 57.333 50.000 0.00 0.00 0.00 4.63
3249 7393 4.487948 TGTAACGGTCTTGTTAATCCTCG 58.512 43.478 0.00 0.00 36.17 4.63
3250 7394 5.220605 GCATGTAACGGTCTTGTTAATCCTC 60.221 44.000 0.00 0.00 36.17 3.71
3251 7395 4.634443 GCATGTAACGGTCTTGTTAATCCT 59.366 41.667 0.00 0.00 36.17 3.24
3252 7396 4.393680 TGCATGTAACGGTCTTGTTAATCC 59.606 41.667 0.00 0.00 36.17 3.01
3253 7397 5.539582 TGCATGTAACGGTCTTGTTAATC 57.460 39.130 0.00 0.00 36.17 1.75
3254 7398 4.142687 GCTGCATGTAACGGTCTTGTTAAT 60.143 41.667 0.00 0.00 36.17 1.40
3255 7399 3.187637 GCTGCATGTAACGGTCTTGTTAA 59.812 43.478 0.00 0.00 36.17 2.01
3256 7400 2.739913 GCTGCATGTAACGGTCTTGTTA 59.260 45.455 0.00 0.00 33.32 2.41
3257 7401 1.535462 GCTGCATGTAACGGTCTTGTT 59.465 47.619 0.00 0.00 35.86 2.83
3258 7402 1.156736 GCTGCATGTAACGGTCTTGT 58.843 50.000 0.00 0.00 0.00 3.16
3259 7403 1.442769 AGCTGCATGTAACGGTCTTG 58.557 50.000 1.02 0.00 0.00 3.02
3260 7404 2.076863 GAAGCTGCATGTAACGGTCTT 58.923 47.619 1.02 0.00 0.00 3.01
3261 7405 1.276421 AGAAGCTGCATGTAACGGTCT 59.724 47.619 1.02 0.00 0.00 3.85
3262 7406 1.726853 AGAAGCTGCATGTAACGGTC 58.273 50.000 1.02 0.00 0.00 4.79
3263 7407 2.076863 GAAGAAGCTGCATGTAACGGT 58.923 47.619 1.02 0.00 0.00 4.83
3264 7408 2.076100 TGAAGAAGCTGCATGTAACGG 58.924 47.619 1.02 0.00 0.00 4.44
3265 7409 3.371898 TGATGAAGAAGCTGCATGTAACG 59.628 43.478 1.02 0.00 28.32 3.18
3266 7410 4.952262 TGATGAAGAAGCTGCATGTAAC 57.048 40.909 1.02 0.00 28.32 2.50
3267 7411 6.519679 AAATGATGAAGAAGCTGCATGTAA 57.480 33.333 1.02 0.00 28.32 2.41
3268 7412 5.220719 CGAAATGATGAAGAAGCTGCATGTA 60.221 40.000 1.02 0.00 28.32 2.29
3269 7413 4.438336 CGAAATGATGAAGAAGCTGCATGT 60.438 41.667 1.02 0.00 28.32 3.21
3270 7414 4.035684 CGAAATGATGAAGAAGCTGCATG 58.964 43.478 1.02 0.00 28.32 4.06
3271 7415 3.488721 GCGAAATGATGAAGAAGCTGCAT 60.489 43.478 1.02 0.00 31.37 3.96
3272 7416 2.159476 GCGAAATGATGAAGAAGCTGCA 60.159 45.455 1.02 0.00 0.00 4.41
3273 7417 2.448219 GCGAAATGATGAAGAAGCTGC 58.552 47.619 0.00 0.00 0.00 5.25
3274 7418 2.421073 TGGCGAAATGATGAAGAAGCTG 59.579 45.455 0.00 0.00 0.00 4.24
3275 7419 2.715046 TGGCGAAATGATGAAGAAGCT 58.285 42.857 0.00 0.00 0.00 3.74
3276 7420 3.705043 ATGGCGAAATGATGAAGAAGC 57.295 42.857 0.00 0.00 0.00 3.86
3277 7421 4.266976 GCAAATGGCGAAATGATGAAGAAG 59.733 41.667 0.00 0.00 0.00 2.85
3278 7422 4.175516 GCAAATGGCGAAATGATGAAGAA 58.824 39.130 0.00 0.00 0.00 2.52
3279 7423 3.429272 GGCAAATGGCGAAATGATGAAGA 60.429 43.478 0.00 0.00 46.16 2.87
3280 7424 2.861935 GGCAAATGGCGAAATGATGAAG 59.138 45.455 0.00 0.00 46.16 3.02
3281 7425 2.891112 GGCAAATGGCGAAATGATGAA 58.109 42.857 0.00 0.00 46.16 2.57
3282 7426 2.582728 GGCAAATGGCGAAATGATGA 57.417 45.000 0.00 0.00 46.16 2.92
3292 7436 2.378445 AAATAACACCGGCAAATGGC 57.622 45.000 0.00 0.00 43.74 4.40
3310 7454 5.440234 ACACCAACGCACATACATAAAAA 57.560 34.783 0.00 0.00 0.00 1.94
3311 7455 5.215903 CAACACCAACGCACATACATAAAA 58.784 37.500 0.00 0.00 0.00 1.52
3312 7456 4.320567 CCAACACCAACGCACATACATAAA 60.321 41.667 0.00 0.00 0.00 1.40
3313 7457 3.189495 CCAACACCAACGCACATACATAA 59.811 43.478 0.00 0.00 0.00 1.90
3314 7458 2.744741 CCAACACCAACGCACATACATA 59.255 45.455 0.00 0.00 0.00 2.29
3315 7459 1.539388 CCAACACCAACGCACATACAT 59.461 47.619 0.00 0.00 0.00 2.29
3316 7460 0.947960 CCAACACCAACGCACATACA 59.052 50.000 0.00 0.00 0.00 2.29
3317 7461 1.231221 TCCAACACCAACGCACATAC 58.769 50.000 0.00 0.00 0.00 2.39
3318 7462 2.192664 ATCCAACACCAACGCACATA 57.807 45.000 0.00 0.00 0.00 2.29
3319 7463 1.269448 GAATCCAACACCAACGCACAT 59.731 47.619 0.00 0.00 0.00 3.21
3320 7464 0.665835 GAATCCAACACCAACGCACA 59.334 50.000 0.00 0.00 0.00 4.57
3321 7465 0.951558 AGAATCCAACACCAACGCAC 59.048 50.000 0.00 0.00 0.00 5.34
3322 7466 2.552599 TAGAATCCAACACCAACGCA 57.447 45.000 0.00 0.00 0.00 5.24
3323 7467 4.434713 AATTAGAATCCAACACCAACGC 57.565 40.909 0.00 0.00 0.00 4.84
3324 7468 6.072948 TGTGTAATTAGAATCCAACACCAACG 60.073 38.462 0.00 0.00 37.11 4.10
3325 7469 7.209471 TGTGTAATTAGAATCCAACACCAAC 57.791 36.000 0.00 0.00 37.11 3.77
3326 7470 6.432783 CCTGTGTAATTAGAATCCAACACCAA 59.567 38.462 0.00 0.00 37.11 3.67
3327 7471 5.943416 CCTGTGTAATTAGAATCCAACACCA 59.057 40.000 0.00 0.00 37.11 4.17
3328 7472 5.357032 CCCTGTGTAATTAGAATCCAACACC 59.643 44.000 0.00 0.00 37.11 4.16
3329 7473 5.357032 CCCCTGTGTAATTAGAATCCAACAC 59.643 44.000 0.00 0.00 38.13 3.32
3330 7474 5.505780 CCCCTGTGTAATTAGAATCCAACA 58.494 41.667 0.00 0.00 0.00 3.33
3331 7475 4.887655 CCCCCTGTGTAATTAGAATCCAAC 59.112 45.833 0.00 0.00 0.00 3.77
3332 7476 4.542525 ACCCCCTGTGTAATTAGAATCCAA 59.457 41.667 0.00 0.00 0.00 3.53
3333 7477 4.116113 ACCCCCTGTGTAATTAGAATCCA 58.884 43.478 0.00 0.00 0.00 3.41
3334 7478 4.790718 ACCCCCTGTGTAATTAGAATCC 57.209 45.455 0.00 0.00 0.00 3.01
3335 7479 7.287810 ACATTACCCCCTGTGTAATTAGAATC 58.712 38.462 0.00 0.00 36.91 2.52
3336 7480 7.220890 ACATTACCCCCTGTGTAATTAGAAT 57.779 36.000 0.00 0.00 36.91 2.40
3337 7481 6.645884 ACATTACCCCCTGTGTAATTAGAA 57.354 37.500 0.00 0.00 36.91 2.10
3338 7482 7.348801 ACATACATTACCCCCTGTGTAATTAGA 59.651 37.037 0.00 0.00 36.91 2.10
3339 7483 7.444183 CACATACATTACCCCCTGTGTAATTAG 59.556 40.741 0.00 0.00 36.91 1.73
3340 7484 7.284074 CACATACATTACCCCCTGTGTAATTA 58.716 38.462 0.00 0.00 36.91 1.40
3341 7485 6.126409 CACATACATTACCCCCTGTGTAATT 58.874 40.000 0.00 0.00 36.91 1.40
3342 7486 5.690865 CACATACATTACCCCCTGTGTAAT 58.309 41.667 0.00 0.00 38.98 1.89
3343 7487 4.626771 GCACATACATTACCCCCTGTGTAA 60.627 45.833 0.00 0.00 37.05 2.41
3344 7488 3.118186 GCACATACATTACCCCCTGTGTA 60.118 47.826 0.00 0.00 37.05 2.90
3345 7489 2.356741 GCACATACATTACCCCCTGTGT 60.357 50.000 0.00 0.00 37.05 3.72
3346 7490 2.092429 AGCACATACATTACCCCCTGTG 60.092 50.000 0.00 0.00 37.60 3.66
3347 7491 2.172717 GAGCACATACATTACCCCCTGT 59.827 50.000 0.00 0.00 0.00 4.00
3348 7492 2.172505 TGAGCACATACATTACCCCCTG 59.827 50.000 0.00 0.00 0.00 4.45
3349 7493 2.487775 TGAGCACATACATTACCCCCT 58.512 47.619 0.00 0.00 0.00 4.79
3350 7494 3.508845 ATGAGCACATACATTACCCCC 57.491 47.619 0.00 0.00 34.71 5.40
3351 7495 4.036734 CACAATGAGCACATACATTACCCC 59.963 45.833 0.00 0.00 35.39 4.95
3352 7496 4.640201 ACACAATGAGCACATACATTACCC 59.360 41.667 0.00 0.00 35.39 3.69
3353 7497 5.818136 ACACAATGAGCACATACATTACC 57.182 39.130 0.00 0.00 35.39 2.85
3354 7498 7.083858 ACAAACACAATGAGCACATACATTAC 58.916 34.615 0.00 0.00 35.39 1.89
3355 7499 7.213216 ACAAACACAATGAGCACATACATTA 57.787 32.000 0.00 0.00 35.39 1.90
3356 7500 6.088016 ACAAACACAATGAGCACATACATT 57.912 33.333 0.00 0.00 37.22 2.71
3357 7501 5.710513 ACAAACACAATGAGCACATACAT 57.289 34.783 0.00 0.00 35.50 2.29
3358 7502 6.128035 GGATACAAACACAATGAGCACATACA 60.128 38.462 0.00 0.00 35.50 2.29
3359 7503 6.094048 AGGATACAAACACAATGAGCACATAC 59.906 38.462 0.00 0.00 35.42 2.39
3360 7504 6.179756 AGGATACAAACACAATGAGCACATA 58.820 36.000 0.00 0.00 35.42 2.29
3361 7505 5.012239 AGGATACAAACACAATGAGCACAT 58.988 37.500 0.00 0.00 37.42 3.21
3362 7506 4.397420 AGGATACAAACACAATGAGCACA 58.603 39.130 0.00 0.00 41.41 4.57
3363 7507 4.697352 AGAGGATACAAACACAATGAGCAC 59.303 41.667 0.00 0.00 41.41 4.40
3364 7508 4.910195 AGAGGATACAAACACAATGAGCA 58.090 39.130 0.00 0.00 41.41 4.26
3365 7509 4.937620 TGAGAGGATACAAACACAATGAGC 59.062 41.667 0.00 0.00 41.41 4.26
3366 7510 7.621428 ATTGAGAGGATACAAACACAATGAG 57.379 36.000 0.00 0.00 41.41 2.90
3367 7511 9.513906 TTTATTGAGAGGATACAAACACAATGA 57.486 29.630 0.00 0.00 41.41 2.57
3417 7561 3.345508 GGTACCTAAGGACCAAGTTGG 57.654 52.381 20.76 20.76 45.02 3.77
3433 7577 2.224402 GCAGAATCCTCCAGATGGGTAC 60.224 54.545 0.00 0.00 34.56 3.34
3434 7578 2.050144 GCAGAATCCTCCAGATGGGTA 58.950 52.381 0.00 0.00 34.56 3.69
3435 7579 0.842635 GCAGAATCCTCCAGATGGGT 59.157 55.000 0.00 0.00 34.56 4.51
3436 7580 0.110104 GGCAGAATCCTCCAGATGGG 59.890 60.000 0.00 0.00 34.56 4.00
3437 7581 0.110104 GGGCAGAATCCTCCAGATGG 59.890 60.000 0.00 0.00 34.56 3.51
3438 7582 0.841961 TGGGCAGAATCCTCCAGATG 59.158 55.000 0.00 0.00 34.56 2.90
3439 7583 0.842635 GTGGGCAGAATCCTCCAGAT 59.157 55.000 0.00 0.00 36.48 2.90
3440 7584 1.274703 GGTGGGCAGAATCCTCCAGA 61.275 60.000 0.00 0.00 37.74 3.86
3441 7585 1.225704 GGTGGGCAGAATCCTCCAG 59.774 63.158 0.00 0.00 37.74 3.86
3442 7586 2.308722 GGGTGGGCAGAATCCTCCA 61.309 63.158 0.00 0.00 39.12 3.86
3443 7587 2.003548 AGGGTGGGCAGAATCCTCC 61.004 63.158 0.00 0.00 37.25 4.30
3444 7588 1.225704 CAGGGTGGGCAGAATCCTC 59.774 63.158 0.00 0.00 0.00 3.71
3445 7589 2.988839 GCAGGGTGGGCAGAATCCT 61.989 63.158 0.00 0.00 0.00 3.24
3446 7590 2.440980 GCAGGGTGGGCAGAATCC 60.441 66.667 0.00 0.00 0.00 3.01
3447 7591 2.440980 GGCAGGGTGGGCAGAATC 60.441 66.667 0.00 0.00 0.00 2.52
3448 7592 4.431131 CGGCAGGGTGGGCAGAAT 62.431 66.667 0.00 0.00 0.00 2.40
3466 7610 4.781959 CCAGCCACAATTGCGCCG 62.782 66.667 4.18 0.00 0.00 6.46
3467 7611 3.372730 TCCAGCCACAATTGCGCC 61.373 61.111 4.18 0.00 0.00 6.53
3468 7612 2.126346 GTCCAGCCACAATTGCGC 60.126 61.111 5.05 0.00 0.00 6.09
3469 7613 2.203972 CTGGTCCAGCCACAATTGCG 62.204 60.000 5.79 0.00 43.61 4.85
3470 7614 1.588082 CTGGTCCAGCCACAATTGC 59.412 57.895 5.79 0.00 43.61 3.56
3471 7615 0.540365 ACCTGGTCCAGCCACAATTG 60.540 55.000 13.99 3.24 43.61 2.32
3472 7616 0.188342 AACCTGGTCCAGCCACAATT 59.812 50.000 13.99 0.00 43.61 2.32
3473 7617 0.251341 GAACCTGGTCCAGCCACAAT 60.251 55.000 13.99 0.00 43.61 2.71
3474 7618 1.150536 GAACCTGGTCCAGCCACAA 59.849 57.895 13.99 0.00 43.61 3.33
3475 7619 1.770110 AGAACCTGGTCCAGCCACA 60.770 57.895 13.99 0.00 43.61 4.17
3476 7620 1.302832 CAGAACCTGGTCCAGCCAC 60.303 63.158 13.99 6.36 43.61 5.01
3477 7621 1.352622 AACAGAACCTGGTCCAGCCA 61.353 55.000 13.99 0.00 46.95 4.75
3478 7622 0.890996 CAACAGAACCTGGTCCAGCC 60.891 60.000 13.99 4.82 35.51 4.85
3479 7623 0.890996 CCAACAGAACCTGGTCCAGC 60.891 60.000 13.99 0.00 35.51 4.85
3480 7624 0.890996 GCCAACAGAACCTGGTCCAG 60.891 60.000 12.40 12.40 35.51 3.86
3481 7625 1.150536 GCCAACAGAACCTGGTCCA 59.849 57.895 0.00 0.00 35.51 4.02
3482 7626 0.178990 AAGCCAACAGAACCTGGTCC 60.179 55.000 0.00 0.00 35.51 4.46
3483 7627 1.692411 AAAGCCAACAGAACCTGGTC 58.308 50.000 0.00 0.00 35.51 4.02
3484 7628 2.031870 GAAAAGCCAACAGAACCTGGT 58.968 47.619 0.00 0.00 35.51 4.00
3485 7629 2.031120 TGAAAAGCCAACAGAACCTGG 58.969 47.619 0.00 0.00 35.51 4.45
3486 7630 3.131046 AGTTGAAAAGCCAACAGAACCTG 59.869 43.478 9.09 0.00 46.48 4.00
3487 7631 3.365472 AGTTGAAAAGCCAACAGAACCT 58.635 40.909 9.09 0.00 46.48 3.50
3488 7632 3.801114 AGTTGAAAAGCCAACAGAACC 57.199 42.857 9.09 0.00 46.48 3.62
3489 7633 6.330278 ACTTAAGTTGAAAAGCCAACAGAAC 58.670 36.000 1.12 0.00 46.48 3.01
3490 7634 6.524101 ACTTAAGTTGAAAAGCCAACAGAA 57.476 33.333 1.12 2.60 46.48 3.02
3491 7635 6.524101 AACTTAAGTTGAAAAGCCAACAGA 57.476 33.333 19.94 0.00 46.48 3.41
3492 7636 7.595311 AAAACTTAAGTTGAAAAGCCAACAG 57.405 32.000 21.22 1.55 46.48 3.16
3496 7640 9.738832 GTGTATAAAACTTAAGTTGAAAAGCCA 57.261 29.630 21.22 9.71 38.44 4.75
3497 7641 9.961265 AGTGTATAAAACTTAAGTTGAAAAGCC 57.039 29.630 21.22 8.28 38.44 4.35
3510 7654 9.677567 CAATGTGCAAGTTAGTGTATAAAACTT 57.322 29.630 0.00 0.00 42.60 2.66
3511 7655 9.062524 TCAATGTGCAAGTTAGTGTATAAAACT 57.937 29.630 0.00 0.00 35.01 2.66
3512 7656 9.840427 ATCAATGTGCAAGTTAGTGTATAAAAC 57.160 29.630 0.00 0.00 0.00 2.43
3516 7660 9.838975 CAAAATCAATGTGCAAGTTAGTGTATA 57.161 29.630 0.00 0.00 0.00 1.47
3517 7661 8.359642 ACAAAATCAATGTGCAAGTTAGTGTAT 58.640 29.630 0.00 0.00 0.00 2.29
3518 7662 7.711846 ACAAAATCAATGTGCAAGTTAGTGTA 58.288 30.769 0.00 0.00 0.00 2.90
3519 7663 6.572519 ACAAAATCAATGTGCAAGTTAGTGT 58.427 32.000 0.00 0.00 0.00 3.55
3520 7664 7.467557 AACAAAATCAATGTGCAAGTTAGTG 57.532 32.000 0.00 0.00 0.00 2.74
3521 7665 7.043458 CGAAACAAAATCAATGTGCAAGTTAGT 60.043 33.333 0.00 0.00 0.00 2.24
3522 7666 7.275785 CGAAACAAAATCAATGTGCAAGTTAG 58.724 34.615 0.00 0.00 0.00 2.34
3523 7667 6.199908 CCGAAACAAAATCAATGTGCAAGTTA 59.800 34.615 0.00 0.00 0.00 2.24
3524 7668 5.006552 CCGAAACAAAATCAATGTGCAAGTT 59.993 36.000 0.00 0.00 0.00 2.66
3525 7669 4.507388 CCGAAACAAAATCAATGTGCAAGT 59.493 37.500 0.00 0.00 0.00 3.16
3526 7670 4.507388 ACCGAAACAAAATCAATGTGCAAG 59.493 37.500 0.00 0.00 0.00 4.01
3527 7671 4.437239 ACCGAAACAAAATCAATGTGCAA 58.563 34.783 0.00 0.00 0.00 4.08
3528 7672 4.052159 ACCGAAACAAAATCAATGTGCA 57.948 36.364 0.00 0.00 0.00 4.57
3529 7673 5.196825 CAAACCGAAACAAAATCAATGTGC 58.803 37.500 0.00 0.00 0.00 4.57
3530 7674 6.343226 ACAAACCGAAACAAAATCAATGTG 57.657 33.333 0.00 0.00 0.00 3.21
3531 7675 6.370166 ACAACAAACCGAAACAAAATCAATGT 59.630 30.769 0.00 0.00 0.00 2.71
3532 7676 6.770076 ACAACAAACCGAAACAAAATCAATG 58.230 32.000 0.00 0.00 0.00 2.82
3533 7677 6.816140 AGACAACAAACCGAAACAAAATCAAT 59.184 30.769 0.00 0.00 0.00 2.57
3534 7678 6.159988 AGACAACAAACCGAAACAAAATCAA 58.840 32.000 0.00 0.00 0.00 2.57
3535 7679 5.715070 AGACAACAAACCGAAACAAAATCA 58.285 33.333 0.00 0.00 0.00 2.57
3536 7680 7.924103 ATAGACAACAAACCGAAACAAAATC 57.076 32.000 0.00 0.00 0.00 2.17
3537 7681 9.974980 AATATAGACAACAAACCGAAACAAAAT 57.025 25.926 0.00 0.00 0.00 1.82
3538 7682 9.804758 AAATATAGACAACAAACCGAAACAAAA 57.195 25.926 0.00 0.00 0.00 2.44
3539 7683 9.804758 AAAATATAGACAACAAACCGAAACAAA 57.195 25.926 0.00 0.00 0.00 2.83
3540 7684 9.453325 GAAAATATAGACAACAAACCGAAACAA 57.547 29.630 0.00 0.00 0.00 2.83
3541 7685 8.622157 TGAAAATATAGACAACAAACCGAAACA 58.378 29.630 0.00 0.00 0.00 2.83
3542 7686 9.620660 ATGAAAATATAGACAACAAACCGAAAC 57.379 29.630 0.00 0.00 0.00 2.78
3546 7690 9.221775 GCTTATGAAAATATAGACAACAAACCG 57.778 33.333 0.00 0.00 0.00 4.44
3547 7691 9.221775 CGCTTATGAAAATATAGACAACAAACC 57.778 33.333 0.00 0.00 0.00 3.27
3548 7692 9.769093 ACGCTTATGAAAATATAGACAACAAAC 57.231 29.630 0.00 0.00 0.00 2.93
3550 7694 9.767684 CAACGCTTATGAAAATATAGACAACAA 57.232 29.630 0.00 0.00 0.00 2.83
3551 7695 8.941977 ACAACGCTTATGAAAATATAGACAACA 58.058 29.630 0.00 0.00 0.00 3.33
3554 7698 9.589111 TGTACAACGCTTATGAAAATATAGACA 57.411 29.630 0.00 0.00 0.00 3.41
3561 7705 8.635124 CGAAAAATGTACAACGCTTATGAAAAT 58.365 29.630 0.00 0.00 0.00 1.82
3562 7706 7.644551 ACGAAAAATGTACAACGCTTATGAAAA 59.355 29.630 0.00 0.00 0.00 2.29
3563 7707 7.133513 ACGAAAAATGTACAACGCTTATGAAA 58.866 30.769 0.00 0.00 0.00 2.69
3564 7708 6.660722 ACGAAAAATGTACAACGCTTATGAA 58.339 32.000 0.00 0.00 0.00 2.57
3565 7709 6.230849 ACGAAAAATGTACAACGCTTATGA 57.769 33.333 0.00 0.00 0.00 2.15
3566 7710 9.858247 ATATACGAAAAATGTACAACGCTTATG 57.142 29.630 0.00 0.00 0.00 1.90
3568 7712 8.261229 CGATATACGAAAAATGTACAACGCTTA 58.739 33.333 0.00 0.00 45.77 3.09
3569 7713 7.114920 CGATATACGAAAAATGTACAACGCTT 58.885 34.615 0.00 0.00 45.77 4.68
3570 7714 6.633683 CGATATACGAAAAATGTACAACGCT 58.366 36.000 0.00 0.00 45.77 5.07
3571 7715 6.852110 CGATATACGAAAAATGTACAACGC 57.148 37.500 0.00 0.00 45.77 4.84
3647 7791 9.755804 TGAAAACATGTATTCTGCAAAAATGTA 57.244 25.926 0.00 0.00 0.00 2.29
3648 7792 8.659925 TGAAAACATGTATTCTGCAAAAATGT 57.340 26.923 0.00 0.00 0.00 2.71
3649 7793 9.536558 CATGAAAACATGTATTCTGCAAAAATG 57.463 29.630 0.00 0.00 0.00 2.32
3650 7794 8.231837 GCATGAAAACATGTATTCTGCAAAAAT 58.768 29.630 0.00 0.00 33.66 1.82
3651 7795 7.441760 AGCATGAAAACATGTATTCTGCAAAAA 59.558 29.630 17.25 0.00 34.77 1.94
3652 7796 6.930164 AGCATGAAAACATGTATTCTGCAAAA 59.070 30.769 17.25 0.00 34.77 2.44
3653 7797 6.457355 AGCATGAAAACATGTATTCTGCAAA 58.543 32.000 17.25 0.00 34.77 3.68
3654 7798 6.028146 AGCATGAAAACATGTATTCTGCAA 57.972 33.333 17.25 0.00 34.77 4.08
3655 7799 5.648178 AGCATGAAAACATGTATTCTGCA 57.352 34.783 17.25 0.00 34.77 4.41
3656 7800 7.253422 AGTAAGCATGAAAACATGTATTCTGC 58.747 34.615 0.00 5.53 35.16 4.26
3657 7801 9.630098 AAAGTAAGCATGAAAACATGTATTCTG 57.370 29.630 0.00 0.00 35.16 3.02
3660 7804 9.762933 ACAAAAGTAAGCATGAAAACATGTATT 57.237 25.926 0.00 9.03 35.16 1.89
3661 7805 9.762933 AACAAAAGTAAGCATGAAAACATGTAT 57.237 25.926 0.00 0.00 35.16 2.29
3662 7806 9.593134 AAACAAAAGTAAGCATGAAAACATGTA 57.407 25.926 0.00 0.00 35.16 2.29
3663 7807 8.491331 AAACAAAAGTAAGCATGAAAACATGT 57.509 26.923 0.00 0.00 35.16 3.21
3666 7810 9.255304 GGATAAACAAAAGTAAGCATGAAAACA 57.745 29.630 0.00 0.00 0.00 2.83
3667 7811 9.255304 TGGATAAACAAAAGTAAGCATGAAAAC 57.745 29.630 0.00 0.00 0.00 2.43
3668 7812 9.995003 ATGGATAAACAAAAGTAAGCATGAAAA 57.005 25.926 0.00 0.00 0.00 2.29
3669 7813 9.995003 AATGGATAAACAAAAGTAAGCATGAAA 57.005 25.926 0.00 0.00 0.00 2.69
3670 7814 9.638239 GAATGGATAAACAAAAGTAAGCATGAA 57.362 29.630 0.00 0.00 0.00 2.57
3671 7815 9.023962 AGAATGGATAAACAAAAGTAAGCATGA 57.976 29.630 0.00 0.00 0.00 3.07
3674 7818 9.515226 AGTAGAATGGATAAACAAAAGTAAGCA 57.485 29.630 0.00 0.00 0.00 3.91
3734 7878 9.645059 TGTGAAATCATGTTGAAAAGTGTTAAA 57.355 25.926 0.00 0.00 0.00 1.52
3735 7879 9.814899 ATGTGAAATCATGTTGAAAAGTGTTAA 57.185 25.926 0.00 0.00 0.00 2.01
3736 7880 9.814899 AATGTGAAATCATGTTGAAAAGTGTTA 57.185 25.926 0.00 0.00 0.00 2.41
3737 7881 8.721019 AATGTGAAATCATGTTGAAAAGTGTT 57.279 26.923 0.00 0.00 0.00 3.32
3738 7882 8.721019 AAATGTGAAATCATGTTGAAAAGTGT 57.279 26.923 0.00 0.00 0.00 3.55
3739 7883 9.640974 GAAAATGTGAAATCATGTTGAAAAGTG 57.359 29.630 0.00 0.00 0.00 3.16
3740 7884 9.603921 AGAAAATGTGAAATCATGTTGAAAAGT 57.396 25.926 0.00 0.00 0.00 2.66
3775 7919 9.376075 ACACATTTGAAAAATATGTCAAACACA 57.624 25.926 10.17 0.00 44.24 3.72
3781 7925 9.202273 GGCTTAACACATTTGAAAAATATGTCA 57.798 29.630 0.00 0.00 30.45 3.58
3782 7926 9.423061 AGGCTTAACACATTTGAAAAATATGTC 57.577 29.630 0.00 0.00 30.45 3.06
3783 7927 9.777297 AAGGCTTAACACATTTGAAAAATATGT 57.223 25.926 0.00 0.00 32.98 2.29
3788 7932 9.003658 TGAAAAAGGCTTAACACATTTGAAAAA 57.996 25.926 0.00 0.00 0.00 1.94
3789 7933 8.553459 TGAAAAAGGCTTAACACATTTGAAAA 57.447 26.923 0.00 0.00 0.00 2.29
3790 7934 8.553459 TTGAAAAAGGCTTAACACATTTGAAA 57.447 26.923 0.00 0.00 0.00 2.69
3791 7935 8.553459 TTTGAAAAAGGCTTAACACATTTGAA 57.447 26.923 0.00 0.00 0.00 2.69
3792 7936 8.610896 CATTTGAAAAAGGCTTAACACATTTGA 58.389 29.630 0.00 0.00 0.00 2.69
3793 7937 7.376601 GCATTTGAAAAAGGCTTAACACATTTG 59.623 33.333 0.00 2.16 0.00 2.32
3794 7938 7.066766 TGCATTTGAAAAAGGCTTAACACATTT 59.933 29.630 0.00 0.00 0.00 2.32
3795 7939 6.541641 TGCATTTGAAAAAGGCTTAACACATT 59.458 30.769 0.00 0.00 0.00 2.71
3796 7940 6.018016 GTGCATTTGAAAAAGGCTTAACACAT 60.018 34.615 0.00 0.00 0.00 3.21
3797 7941 5.293079 GTGCATTTGAAAAAGGCTTAACACA 59.707 36.000 0.00 0.00 0.00 3.72
3798 7942 5.277297 GGTGCATTTGAAAAAGGCTTAACAC 60.277 40.000 0.00 0.00 0.00 3.32
3799 7943 4.813697 GGTGCATTTGAAAAAGGCTTAACA 59.186 37.500 0.00 0.00 0.00 2.41
3800 7944 5.056480 AGGTGCATTTGAAAAAGGCTTAAC 58.944 37.500 0.00 1.46 0.00 2.01
3801 7945 5.289083 AGGTGCATTTGAAAAAGGCTTAA 57.711 34.783 0.00 0.00 0.00 1.85
3802 7946 4.953940 AGGTGCATTTGAAAAAGGCTTA 57.046 36.364 0.00 0.00 0.00 3.09
3803 7947 3.843893 AGGTGCATTTGAAAAAGGCTT 57.156 38.095 10.27 0.00 0.00 4.35
3804 7948 3.469739 CAAGGTGCATTTGAAAAAGGCT 58.530 40.909 10.27 0.00 0.00 4.58
3805 7949 2.031769 GCAAGGTGCATTTGAAAAAGGC 60.032 45.455 15.58 2.62 44.26 4.35
3806 7950 3.883631 GCAAGGTGCATTTGAAAAAGG 57.116 42.857 15.58 0.00 44.26 3.11
3878 8022 9.766277 GACATTTTCAAATTGCACAAAAGTAAA 57.234 25.926 0.00 0.00 0.00 2.01
3879 8023 8.939929 TGACATTTTCAAATTGCACAAAAGTAA 58.060 25.926 0.00 0.00 0.00 2.24
3880 8024 8.386606 GTGACATTTTCAAATTGCACAAAAGTA 58.613 29.630 11.46 0.00 35.39 2.24
3881 8025 7.242783 GTGACATTTTCAAATTGCACAAAAGT 58.757 30.769 11.46 0.00 35.39 2.66
3882 8026 6.687958 GGTGACATTTTCAAATTGCACAAAAG 59.312 34.615 15.29 0.00 35.39 2.27
3883 8027 6.149973 TGGTGACATTTTCAAATTGCACAAAA 59.850 30.769 15.29 0.00 35.39 2.44
3884 8028 5.645067 TGGTGACATTTTCAAATTGCACAAA 59.355 32.000 15.29 6.26 35.39 2.83
3885 8029 5.181009 TGGTGACATTTTCAAATTGCACAA 58.819 33.333 15.29 7.00 35.39 3.33
3886 8030 4.763073 TGGTGACATTTTCAAATTGCACA 58.237 34.783 15.29 5.66 35.39 4.57
3887 8031 5.064452 TGTTGGTGACATTTTCAAATTGCAC 59.936 36.000 0.00 9.34 42.32 4.57
3888 8032 5.064452 GTGTTGGTGACATTTTCAAATTGCA 59.936 36.000 0.00 0.00 41.10 4.08
3889 8033 5.064452 TGTGTTGGTGACATTTTCAAATTGC 59.936 36.000 0.00 0.00 41.10 3.56
3890 8034 6.659361 TGTGTTGGTGACATTTTCAAATTG 57.341 33.333 0.00 0.00 41.10 2.32
3891 8035 7.862512 AATGTGTTGGTGACATTTTCAAATT 57.137 28.000 0.00 0.00 40.39 1.82
3892 8036 7.862512 AAATGTGTTGGTGACATTTTCAAAT 57.137 28.000 0.00 0.00 46.90 2.32
3899 8043 7.221838 CGAGTTTAAAAATGTGTTGGTGACATT 59.778 33.333 0.00 0.00 44.21 2.71
3900 8044 6.695278 CGAGTTTAAAAATGTGTTGGTGACAT 59.305 34.615 0.00 0.00 41.10 3.06
3901 8045 6.030849 CGAGTTTAAAAATGTGTTGGTGACA 58.969 36.000 0.00 0.00 39.83 3.58
3902 8046 6.020995 CACGAGTTTAAAAATGTGTTGGTGAC 60.021 38.462 0.00 0.00 0.00 3.67
3903 8047 6.030849 CACGAGTTTAAAAATGTGTTGGTGA 58.969 36.000 0.00 0.00 0.00 4.02
3904 8048 6.030849 TCACGAGTTTAAAAATGTGTTGGTG 58.969 36.000 12.12 0.00 0.00 4.17
3905 8049 6.197364 TCACGAGTTTAAAAATGTGTTGGT 57.803 33.333 12.12 0.00 0.00 3.67
3906 8050 6.970043 TCTTCACGAGTTTAAAAATGTGTTGG 59.030 34.615 12.12 6.57 0.00 3.77
3907 8051 7.962934 TCTTCACGAGTTTAAAAATGTGTTG 57.037 32.000 12.12 8.20 0.00 3.33


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.