Multiple sequence alignment - TraesCS4D01G232600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G232600 chr4D 100.000 3032 0 0 1 3032 393155889 393152858 0.000000e+00 5600
1 TraesCS4D01G232600 chr4D 90.133 527 33 8 1642 2149 393646636 393647162 0.000000e+00 667
2 TraesCS4D01G232600 chr4D 90.076 524 33 8 1648 2152 393248024 393247501 0.000000e+00 662
3 TraesCS4D01G232600 chr4D 97.165 388 10 1 1 387 64527942 64527555 0.000000e+00 654
4 TraesCS4D01G232600 chr4D 83.688 705 68 29 927 1606 393645946 393646628 3.320000e-174 621
5 TraesCS4D01G232600 chr4D 83.262 705 71 30 927 1606 393248720 393248038 3.340000e-169 604
6 TraesCS4D01G232600 chr4D 90.164 122 12 0 2911 3032 393705266 393705387 3.130000e-35 159
7 TraesCS4D01G232600 chr3D 91.906 1149 33 18 384 1517 124501152 124500049 0.000000e+00 1552
8 TraesCS4D01G232600 chr3D 97.906 382 7 1 1 381 437756997 437756616 0.000000e+00 660
9 TraesCS4D01G232600 chr3D 98.153 379 6 1 1 378 515544674 515545052 0.000000e+00 660
10 TraesCS4D01G232600 chr3D 96.465 396 11 3 1 395 289595394 289595001 0.000000e+00 651
11 TraesCS4D01G232600 chr3D 90.553 434 36 3 1513 1943 124498350 124497919 1.220000e-158 569
12 TraesCS4D01G232600 chr3D 90.064 312 11 4 2315 2609 124497247 124496939 1.320000e-103 387
13 TraesCS4D01G232600 chr3D 93.220 236 13 2 2208 2443 589267534 589267766 8.050000e-91 344
14 TraesCS4D01G232600 chr3D 94.009 217 13 0 2699 2915 124491819 124491603 2.250000e-86 329
15 TraesCS4D01G232600 chr3D 95.902 122 5 0 2911 3032 124491523 124491402 6.630000e-47 198
16 TraesCS4D01G232600 chr4A 88.444 1073 81 24 913 1952 74589063 74588001 0.000000e+00 1254
17 TraesCS4D01G232600 chr4A 85.242 1118 78 40 1073 2152 74601250 74600182 0.000000e+00 1070
18 TraesCS4D01G232600 chr4A 90.349 487 31 7 384 867 725914846 725914373 2.570000e-175 625
19 TraesCS4D01G232600 chr4A 86.679 548 49 16 2151 2689 74587461 74586929 1.210000e-163 586
20 TraesCS4D01G232600 chr4A 93.925 214 13 0 2704 2917 74586835 74586622 1.050000e-84 324
21 TraesCS4D01G232600 chr4A 94.712 208 11 0 1945 2152 74599424 74599217 1.050000e-84 324
22 TraesCS4D01G232600 chr4B 86.767 1058 89 28 927 1952 482979044 482978006 0.000000e+00 1131
23 TraesCS4D01G232600 chr4B 85.028 1082 91 33 1100 2152 482984455 482983416 0.000000e+00 1035
24 TraesCS4D01G232600 chr4B 90.103 485 34 7 384 867 420427985 420427514 4.290000e-173 617
25 TraesCS4D01G232600 chr5B 84.128 1090 113 30 1086 2152 63253929 63252877 0.000000e+00 1000
26 TraesCS4D01G232600 chr5B 87.500 488 38 11 381 867 271913175 271913640 2.660000e-150 542
27 TraesCS4D01G232600 chr1B 91.434 502 26 9 388 888 208990218 208989733 0.000000e+00 673
28 TraesCS4D01G232600 chrUn 98.153 379 6 1 1 378 408154622 408154244 0.000000e+00 660
29 TraesCS4D01G232600 chrUn 98.153 379 6 1 1 378 426266467 426266089 0.000000e+00 660
30 TraesCS4D01G232600 chrUn 90.798 489 30 7 381 867 15453699 15454174 9.170000e-180 640
31 TraesCS4D01G232600 chrUn 89.729 516 28 9 388 892 242486157 242486658 1.190000e-178 636
32 TraesCS4D01G232600 chrUn 88.491 530 37 10 384 902 429538135 429537619 1.190000e-173 619
33 TraesCS4D01G232600 chrUn 93.220 236 13 2 2208 2443 397078317 397078549 8.050000e-91 344
34 TraesCS4D01G232600 chrUn 93.220 236 13 2 2208 2443 455551879 455551647 8.050000e-91 344
35 TraesCS4D01G232600 chrUn 92.035 113 7 2 756 867 191003407 191003518 1.130000e-34 158
36 TraesCS4D01G232600 chr5D 97.906 382 7 1 1 381 234201552 234201171 0.000000e+00 660
37 TraesCS4D01G232600 chr5D 97.172 389 8 2 1 388 533649204 533648818 0.000000e+00 654
38 TraesCS4D01G232600 chr5D 93.249 237 11 4 2208 2443 523035277 523035045 8.050000e-91 344
39 TraesCS4D01G232600 chr2D 98.153 379 6 1 1 378 234348989 234349367 0.000000e+00 660
40 TraesCS4D01G232600 chr6B 90.928 485 30 7 384 867 716502321 716501850 9.170000e-180 640
41 TraesCS4D01G232600 chr6B 92.035 113 7 2 756 867 432865759 432865870 1.130000e-34 158
42 TraesCS4D01G232600 chr6A 90.779 488 31 7 381 867 90747391 90747865 9.170000e-180 640
43 TraesCS4D01G232600 chr6A 93.220 236 12 3 2208 2443 608869765 608869996 8.050000e-91 344
44 TraesCS4D01G232600 chr1A 89.754 488 36 7 381 867 579080455 579080929 2.000000e-171 612
45 TraesCS4D01G232600 chr7B 87.423 485 38 11 384 867 524880191 524879729 1.240000e-148 536
46 TraesCS4D01G232600 chr7B 87.423 485 38 11 384 867 586983723 586983261 1.240000e-148 536
47 TraesCS4D01G232600 chr7B 82.203 236 21 8 645 867 430828456 430828683 1.860000e-42 183
48 TraesCS4D01G232600 chr3A 87.090 488 40 11 381 867 541218944 541219409 5.760000e-147 531
49 TraesCS4D01G232600 chr6D 82.800 500 51 19 384 868 213382146 213381667 6.050000e-112 414
50 TraesCS4D01G232600 chr6D 93.220 236 13 2 2208 2443 389248362 389248130 8.050000e-91 344
51 TraesCS4D01G232600 chr6D 93.220 236 13 2 2208 2443 389253157 389252925 8.050000e-91 344


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G232600 chr4D 393152858 393155889 3031 True 5600.000000 5600 100.000000 1 3032 1 chr4D.!!$R2 3031
1 TraesCS4D01G232600 chr4D 393645946 393647162 1216 False 644.000000 667 86.910500 927 2149 2 chr4D.!!$F2 1222
2 TraesCS4D01G232600 chr4D 393247501 393248720 1219 True 633.000000 662 86.669000 927 2152 2 chr4D.!!$R3 1225
3 TraesCS4D01G232600 chr3D 124496939 124501152 4213 True 836.000000 1552 90.841000 384 2609 3 chr3D.!!$R4 2225
4 TraesCS4D01G232600 chr4A 74586622 74589063 2441 True 721.333333 1254 89.682667 913 2917 3 chr4A.!!$R2 2004
5 TraesCS4D01G232600 chr4A 74599217 74601250 2033 True 697.000000 1070 89.977000 1073 2152 2 chr4A.!!$R3 1079
6 TraesCS4D01G232600 chr4B 482978006 482979044 1038 True 1131.000000 1131 86.767000 927 1952 1 chr4B.!!$R2 1025
7 TraesCS4D01G232600 chr4B 482983416 482984455 1039 True 1035.000000 1035 85.028000 1100 2152 1 chr4B.!!$R3 1052
8 TraesCS4D01G232600 chr5B 63252877 63253929 1052 True 1000.000000 1000 84.128000 1086 2152 1 chr5B.!!$R1 1066
9 TraesCS4D01G232600 chrUn 242486157 242486658 501 False 636.000000 636 89.729000 388 892 1 chrUn.!!$F3 504
10 TraesCS4D01G232600 chrUn 429537619 429538135 516 True 619.000000 619 88.491000 384 902 1 chrUn.!!$R3 518

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
188 189 0.031449 TCGTCATCAACACTGTCGCA 59.969 50.0 0.0 0.0 0.0 5.10 F
193 194 0.036732 ATCAACACTGTCGCACCCAT 59.963 50.0 0.0 0.0 0.0 4.00 F
906 918 0.609131 GCTTCCTACCTTGCAGCCAA 60.609 55.0 0.0 0.0 0.0 4.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1366 1473 0.599728 GATGAGCATGTCCTCCTCGC 60.600 60.0 0.0 0.0 0.00 5.03 R
1450 1557 1.144969 GTTCTTGATGGCGTTGTCGA 58.855 50.0 0.0 0.0 39.71 4.20 R
2725 6037 0.110486 GAGGAAGTGGTGAAGCCCAA 59.890 55.0 0.0 0.0 35.92 4.12 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.348857 CCGGAACCGTTCGTCTTT 57.651 55.556 12.23 0.00 37.81 2.52
18 19 1.857364 CCGGAACCGTTCGTCTTTG 59.143 57.895 12.23 0.00 37.81 2.77
19 20 1.203313 CGGAACCGTTCGTCTTTGC 59.797 57.895 4.99 0.00 34.35 3.68
20 21 1.203313 GGAACCGTTCGTCTTTGCG 59.797 57.895 5.19 0.00 0.00 4.85
21 22 1.216941 GGAACCGTTCGTCTTTGCGA 61.217 55.000 5.19 0.00 39.28 5.10
22 23 0.788391 GAACCGTTCGTCTTTGCGAT 59.212 50.000 0.00 0.00 40.76 4.58
23 24 0.788391 AACCGTTCGTCTTTGCGATC 59.212 50.000 0.00 0.00 40.76 3.69
24 25 1.012486 ACCGTTCGTCTTTGCGATCC 61.012 55.000 0.00 0.00 40.76 3.36
25 26 0.736325 CCGTTCGTCTTTGCGATCCT 60.736 55.000 0.00 0.00 40.76 3.24
26 27 0.366871 CGTTCGTCTTTGCGATCCTG 59.633 55.000 0.00 0.00 40.76 3.86
27 28 0.095417 GTTCGTCTTTGCGATCCTGC 59.905 55.000 0.00 0.00 40.76 4.85
28 29 0.320334 TTCGTCTTTGCGATCCTGCA 60.320 50.000 0.00 0.00 44.61 4.41
29 30 1.014044 TCGTCTTTGCGATCCTGCAC 61.014 55.000 0.00 0.00 46.25 4.57
30 31 1.796796 GTCTTTGCGATCCTGCACC 59.203 57.895 0.00 0.00 46.25 5.01
31 32 1.741401 TCTTTGCGATCCTGCACCG 60.741 57.895 0.00 0.00 46.25 4.94
32 33 2.745884 TTTGCGATCCTGCACCGG 60.746 61.111 0.00 0.00 46.25 5.28
33 34 4.776322 TTGCGATCCTGCACCGGG 62.776 66.667 6.32 0.00 46.25 5.73
35 36 4.899239 GCGATCCTGCACCGGGAG 62.899 72.222 6.32 0.00 42.74 4.30
36 37 3.147595 CGATCCTGCACCGGGAGA 61.148 66.667 6.32 0.00 42.74 3.71
37 38 2.818132 GATCCTGCACCGGGAGAG 59.182 66.667 6.32 0.00 42.74 3.20
38 39 2.765807 ATCCTGCACCGGGAGAGG 60.766 66.667 6.32 7.55 42.74 3.69
39 40 3.317436 ATCCTGCACCGGGAGAGGA 62.317 63.158 17.18 17.18 42.74 3.71
40 41 3.775654 CCTGCACCGGGAGAGGAC 61.776 72.222 6.32 0.00 33.71 3.85
41 42 4.135153 CTGCACCGGGAGAGGACG 62.135 72.222 6.32 0.00 33.71 4.79
42 43 4.671590 TGCACCGGGAGAGGACGA 62.672 66.667 6.32 0.00 34.73 4.20
43 44 3.379445 GCACCGGGAGAGGACGAA 61.379 66.667 6.32 0.00 34.73 3.85
44 45 2.722201 GCACCGGGAGAGGACGAAT 61.722 63.158 6.32 0.00 34.73 3.34
45 46 1.898154 CACCGGGAGAGGACGAATT 59.102 57.895 6.32 0.00 34.73 2.17
46 47 1.108776 CACCGGGAGAGGACGAATTA 58.891 55.000 6.32 0.00 34.73 1.40
47 48 1.067212 CACCGGGAGAGGACGAATTAG 59.933 57.143 6.32 0.00 34.73 1.73
48 49 1.064166 ACCGGGAGAGGACGAATTAGA 60.064 52.381 6.32 0.00 34.73 2.10
49 50 2.240279 CCGGGAGAGGACGAATTAGAT 58.760 52.381 0.00 0.00 0.00 1.98
50 51 2.628657 CCGGGAGAGGACGAATTAGATT 59.371 50.000 0.00 0.00 0.00 2.40
51 52 3.069729 CCGGGAGAGGACGAATTAGATTT 59.930 47.826 0.00 0.00 0.00 2.17
52 53 4.443034 CCGGGAGAGGACGAATTAGATTTT 60.443 45.833 0.00 0.00 0.00 1.82
53 54 5.116882 CGGGAGAGGACGAATTAGATTTTT 58.883 41.667 0.00 0.00 0.00 1.94
54 55 5.006746 CGGGAGAGGACGAATTAGATTTTTG 59.993 44.000 0.00 0.00 0.00 2.44
55 56 5.297029 GGGAGAGGACGAATTAGATTTTTGG 59.703 44.000 0.00 0.00 0.00 3.28
56 57 5.297029 GGAGAGGACGAATTAGATTTTTGGG 59.703 44.000 0.00 0.00 0.00 4.12
57 58 6.062258 AGAGGACGAATTAGATTTTTGGGA 57.938 37.500 0.00 0.00 0.00 4.37
58 59 6.481643 AGAGGACGAATTAGATTTTTGGGAA 58.518 36.000 0.00 0.00 0.00 3.97
59 60 6.599638 AGAGGACGAATTAGATTTTTGGGAAG 59.400 38.462 0.00 0.00 0.00 3.46
60 61 5.125578 AGGACGAATTAGATTTTTGGGAAGC 59.874 40.000 0.00 0.00 0.00 3.86
61 62 4.981794 ACGAATTAGATTTTTGGGAAGCG 58.018 39.130 0.00 0.00 0.00 4.68
62 63 3.791353 CGAATTAGATTTTTGGGAAGCGC 59.209 43.478 0.00 0.00 0.00 5.92
63 64 4.438744 CGAATTAGATTTTTGGGAAGCGCT 60.439 41.667 2.64 2.64 0.00 5.92
64 65 3.848272 TTAGATTTTTGGGAAGCGCTG 57.152 42.857 12.58 0.00 0.00 5.18
65 66 1.620822 AGATTTTTGGGAAGCGCTGT 58.379 45.000 12.58 0.03 0.00 4.40
66 67 1.270550 AGATTTTTGGGAAGCGCTGTG 59.729 47.619 12.58 0.00 0.00 3.66
67 68 0.319813 ATTTTTGGGAAGCGCTGTGC 60.320 50.000 12.58 4.76 46.98 4.57
79 80 3.037833 CTGTGCGCGACTGCTCAA 61.038 61.111 12.10 0.00 37.61 3.02
80 81 2.587473 TGTGCGCGACTGCTCAAA 60.587 55.556 12.10 0.00 37.61 2.69
81 82 1.904852 CTGTGCGCGACTGCTCAAAT 61.905 55.000 12.10 0.00 37.61 2.32
82 83 1.207593 GTGCGCGACTGCTCAAATT 59.792 52.632 12.10 0.00 37.61 1.82
83 84 0.790866 GTGCGCGACTGCTCAAATTC 60.791 55.000 12.10 0.00 37.61 2.17
84 85 1.578618 GCGCGACTGCTCAAATTCG 60.579 57.895 12.10 0.00 39.65 3.34
85 86 1.781555 CGCGACTGCTCAAATTCGT 59.218 52.632 0.00 0.00 39.65 3.85
86 87 0.246912 CGCGACTGCTCAAATTCGTC 60.247 55.000 0.00 0.00 39.65 4.20
87 88 0.790207 GCGACTGCTCAAATTCGTCA 59.210 50.000 0.00 0.00 38.39 4.35
88 89 1.394917 GCGACTGCTCAAATTCGTCAT 59.605 47.619 0.00 0.00 38.39 3.06
89 90 2.535732 GCGACTGCTCAAATTCGTCATC 60.536 50.000 0.00 0.00 38.39 2.92
90 91 2.667969 CGACTGCTCAAATTCGTCATCA 59.332 45.455 0.00 0.00 0.00 3.07
91 92 3.482598 CGACTGCTCAAATTCGTCATCAC 60.483 47.826 0.00 0.00 0.00 3.06
93 94 1.731709 TGCTCAAATTCGTCATCACGG 59.268 47.619 0.00 0.00 46.70 4.94
94 95 1.062587 GCTCAAATTCGTCATCACGGG 59.937 52.381 0.00 0.00 46.70 5.28
95 96 2.346803 CTCAAATTCGTCATCACGGGT 58.653 47.619 0.00 0.00 46.70 5.28
96 97 2.343101 TCAAATTCGTCATCACGGGTC 58.657 47.619 0.00 0.00 46.70 4.46
97 98 1.060553 CAAATTCGTCATCACGGGTCG 59.939 52.381 0.00 0.00 46.70 4.79
98 99 0.245539 AATTCGTCATCACGGGTCGT 59.754 50.000 0.00 0.00 46.70 4.34
99 100 0.179145 ATTCGTCATCACGGGTCGTC 60.179 55.000 0.00 0.00 46.70 4.20
100 101 1.239296 TTCGTCATCACGGGTCGTCT 61.239 55.000 0.00 0.00 46.70 4.18
101 102 1.211969 CGTCATCACGGGTCGTCTT 59.788 57.895 0.00 0.00 42.73 3.01
102 103 0.797249 CGTCATCACGGGTCGTCTTC 60.797 60.000 0.00 0.00 42.73 2.87
103 104 0.458025 GTCATCACGGGTCGTCTTCC 60.458 60.000 0.00 0.00 38.32 3.46
108 109 3.367743 CGGGTCGTCTTCCGTCCA 61.368 66.667 0.00 0.00 45.15 4.02
109 110 2.922950 CGGGTCGTCTTCCGTCCAA 61.923 63.158 0.00 0.00 45.15 3.53
110 111 1.080025 GGGTCGTCTTCCGTCCAAG 60.080 63.158 0.00 0.00 45.15 3.61
111 112 1.664306 GGTCGTCTTCCGTCCAAGT 59.336 57.895 0.00 0.00 43.20 3.16
112 113 0.388263 GGTCGTCTTCCGTCCAAGTC 60.388 60.000 0.00 0.00 43.20 3.01
113 114 0.728466 GTCGTCTTCCGTCCAAGTCG 60.728 60.000 0.00 0.00 36.60 4.18
115 116 1.080025 GTCTTCCGTCCAAGTCGGG 60.080 63.158 4.58 0.00 46.82 5.14
116 117 2.434359 CTTCCGTCCAAGTCGGGC 60.434 66.667 4.58 0.00 46.82 6.13
123 124 4.077184 CCAAGTCGGGCGGTGCTA 62.077 66.667 0.00 0.00 0.00 3.49
124 125 2.813908 CAAGTCGGGCGGTGCTAC 60.814 66.667 0.00 0.00 0.00 3.58
125 126 2.995574 AAGTCGGGCGGTGCTACT 60.996 61.111 0.00 0.00 0.00 2.57
126 127 3.003113 AAGTCGGGCGGTGCTACTC 62.003 63.158 0.00 0.00 0.00 2.59
127 128 3.755628 GTCGGGCGGTGCTACTCA 61.756 66.667 0.00 0.00 0.00 3.41
128 129 2.758327 TCGGGCGGTGCTACTCAT 60.758 61.111 0.00 0.00 0.00 2.90
129 130 2.279517 CGGGCGGTGCTACTCATC 60.280 66.667 0.00 0.00 0.00 2.92
133 134 4.286967 CGGTGCTACTCATCGTCG 57.713 61.111 0.00 0.00 43.96 5.12
134 135 1.428219 CGGTGCTACTCATCGTCGT 59.572 57.895 0.00 0.00 43.96 4.34
135 136 0.654160 CGGTGCTACTCATCGTCGTA 59.346 55.000 0.00 0.00 43.96 3.43
136 137 1.263484 CGGTGCTACTCATCGTCGTAT 59.737 52.381 0.00 0.00 43.96 3.06
137 138 2.286831 CGGTGCTACTCATCGTCGTATT 60.287 50.000 0.00 0.00 43.96 1.89
138 139 3.298317 GGTGCTACTCATCGTCGTATTC 58.702 50.000 0.00 0.00 0.00 1.75
139 140 3.242969 GGTGCTACTCATCGTCGTATTCA 60.243 47.826 0.00 0.00 0.00 2.57
140 141 4.537965 GTGCTACTCATCGTCGTATTCAT 58.462 43.478 0.00 0.00 0.00 2.57
141 142 4.613448 GTGCTACTCATCGTCGTATTCATC 59.387 45.833 0.00 0.00 0.00 2.92
142 143 3.841317 GCTACTCATCGTCGTATTCATCG 59.159 47.826 0.00 0.00 0.00 3.84
143 144 2.651701 ACTCATCGTCGTATTCATCGC 58.348 47.619 0.00 0.00 0.00 4.58
144 145 1.979469 CTCATCGTCGTATTCATCGCC 59.021 52.381 0.00 0.00 0.00 5.54
145 146 0.702924 CATCGTCGTATTCATCGCCG 59.297 55.000 0.00 0.00 0.00 6.46
146 147 0.309922 ATCGTCGTATTCATCGCCGT 59.690 50.000 0.00 0.00 31.87 5.68
147 148 0.316442 TCGTCGTATTCATCGCCGTC 60.316 55.000 0.00 0.00 31.87 4.79
148 149 0.590481 CGTCGTATTCATCGCCGTCA 60.590 55.000 0.00 0.00 0.00 4.35
149 150 1.121240 GTCGTATTCATCGCCGTCAG 58.879 55.000 0.00 0.00 0.00 3.51
150 151 0.594028 TCGTATTCATCGCCGTCAGC 60.594 55.000 0.00 0.00 38.52 4.26
151 152 0.869880 CGTATTCATCGCCGTCAGCA 60.870 55.000 0.00 0.00 44.04 4.41
152 153 0.855349 GTATTCATCGCCGTCAGCAG 59.145 55.000 0.00 0.00 44.04 4.24
153 154 0.875908 TATTCATCGCCGTCAGCAGC 60.876 55.000 0.00 0.00 44.04 5.25
154 155 2.857575 ATTCATCGCCGTCAGCAGCA 62.858 55.000 0.00 0.00 44.04 4.41
155 156 3.561213 CATCGCCGTCAGCAGCAG 61.561 66.667 0.00 0.00 44.04 4.24
156 157 3.763356 ATCGCCGTCAGCAGCAGA 61.763 61.111 0.00 0.00 44.04 4.26
157 158 3.086391 ATCGCCGTCAGCAGCAGAT 62.086 57.895 0.00 0.00 44.04 2.90
158 159 2.967929 ATCGCCGTCAGCAGCAGATC 62.968 60.000 0.00 0.00 44.04 2.75
159 160 3.260483 GCCGTCAGCAGCAGATCG 61.260 66.667 0.00 0.00 42.97 3.69
160 161 2.182791 CCGTCAGCAGCAGATCGT 59.817 61.111 0.00 0.00 0.00 3.73
161 162 1.446792 CCGTCAGCAGCAGATCGTT 60.447 57.895 0.00 0.00 0.00 3.85
162 163 1.690283 CCGTCAGCAGCAGATCGTTG 61.690 60.000 0.00 0.00 0.00 4.10
166 167 3.266964 GCAGCAGATCGTTGCCAA 58.733 55.556 12.77 0.00 45.43 4.52
167 168 1.154150 GCAGCAGATCGTTGCCAAC 60.154 57.895 12.77 0.00 45.43 3.77
168 169 1.855213 GCAGCAGATCGTTGCCAACA 61.855 55.000 8.51 0.00 45.43 3.33
169 170 0.806868 CAGCAGATCGTTGCCAACAT 59.193 50.000 8.51 0.50 45.18 2.71
170 171 1.089920 AGCAGATCGTTGCCAACATC 58.910 50.000 8.51 9.57 45.18 3.06
171 172 0.247814 GCAGATCGTTGCCAACATCG 60.248 55.000 8.51 7.57 39.75 3.84
172 173 1.078709 CAGATCGTTGCCAACATCGT 58.921 50.000 8.51 0.00 39.47 3.73
173 174 1.061131 CAGATCGTTGCCAACATCGTC 59.939 52.381 8.51 0.00 39.47 4.20
174 175 1.075542 GATCGTTGCCAACATCGTCA 58.924 50.000 8.51 0.00 39.47 4.35
175 176 1.665679 GATCGTTGCCAACATCGTCAT 59.334 47.619 8.51 0.00 39.47 3.06
176 177 1.075542 TCGTTGCCAACATCGTCATC 58.924 50.000 8.51 0.00 39.47 2.92
177 178 0.795698 CGTTGCCAACATCGTCATCA 59.204 50.000 8.51 0.00 34.91 3.07
178 179 1.196581 CGTTGCCAACATCGTCATCAA 59.803 47.619 8.51 0.00 34.91 2.57
179 180 2.584791 GTTGCCAACATCGTCATCAAC 58.415 47.619 1.91 0.00 0.00 3.18
180 181 1.889545 TGCCAACATCGTCATCAACA 58.110 45.000 0.00 0.00 0.00 3.33
181 182 1.535028 TGCCAACATCGTCATCAACAC 59.465 47.619 0.00 0.00 0.00 3.32
182 183 1.806542 GCCAACATCGTCATCAACACT 59.193 47.619 0.00 0.00 0.00 3.55
183 184 2.413239 GCCAACATCGTCATCAACACTG 60.413 50.000 0.00 0.00 0.00 3.66
184 185 2.807967 CCAACATCGTCATCAACACTGT 59.192 45.455 0.00 0.00 0.00 3.55
185 186 3.120546 CCAACATCGTCATCAACACTGTC 60.121 47.826 0.00 0.00 0.00 3.51
186 187 2.328473 ACATCGTCATCAACACTGTCG 58.672 47.619 0.00 0.00 0.00 4.35
187 188 1.059692 CATCGTCATCAACACTGTCGC 59.940 52.381 0.00 0.00 0.00 5.19
188 189 0.031449 TCGTCATCAACACTGTCGCA 59.969 50.000 0.00 0.00 0.00 5.10
189 190 0.161658 CGTCATCAACACTGTCGCAC 59.838 55.000 0.00 0.00 0.00 5.34
190 191 0.512952 GTCATCAACACTGTCGCACC 59.487 55.000 0.00 0.00 0.00 5.01
191 192 0.602638 TCATCAACACTGTCGCACCC 60.603 55.000 0.00 0.00 0.00 4.61
192 193 0.884259 CATCAACACTGTCGCACCCA 60.884 55.000 0.00 0.00 0.00 4.51
193 194 0.036732 ATCAACACTGTCGCACCCAT 59.963 50.000 0.00 0.00 0.00 4.00
194 195 0.682292 TCAACACTGTCGCACCCATA 59.318 50.000 0.00 0.00 0.00 2.74
195 196 1.070914 TCAACACTGTCGCACCCATAA 59.929 47.619 0.00 0.00 0.00 1.90
196 197 2.083774 CAACACTGTCGCACCCATAAT 58.916 47.619 0.00 0.00 0.00 1.28
197 198 3.055747 TCAACACTGTCGCACCCATAATA 60.056 43.478 0.00 0.00 0.00 0.98
198 199 3.179443 ACACTGTCGCACCCATAATAG 57.821 47.619 0.00 0.00 0.00 1.73
199 200 1.867233 CACTGTCGCACCCATAATAGC 59.133 52.381 0.00 0.00 0.00 2.97
200 201 1.762957 ACTGTCGCACCCATAATAGCT 59.237 47.619 0.00 0.00 0.00 3.32
201 202 2.963101 ACTGTCGCACCCATAATAGCTA 59.037 45.455 0.00 0.00 0.00 3.32
202 203 3.386726 ACTGTCGCACCCATAATAGCTAA 59.613 43.478 0.00 0.00 0.00 3.09
203 204 3.724374 TGTCGCACCCATAATAGCTAAC 58.276 45.455 0.00 0.00 0.00 2.34
204 205 2.729882 GTCGCACCCATAATAGCTAACG 59.270 50.000 0.00 0.00 0.00 3.18
205 206 2.624364 TCGCACCCATAATAGCTAACGA 59.376 45.455 0.00 0.00 0.00 3.85
206 207 3.257375 TCGCACCCATAATAGCTAACGAT 59.743 43.478 0.00 0.00 0.00 3.73
207 208 3.612860 CGCACCCATAATAGCTAACGATC 59.387 47.826 0.00 0.00 0.00 3.69
208 209 4.566004 GCACCCATAATAGCTAACGATCA 58.434 43.478 0.00 0.00 0.00 2.92
209 210 4.627467 GCACCCATAATAGCTAACGATCAG 59.373 45.833 0.00 0.00 0.00 2.90
210 211 5.784177 CACCCATAATAGCTAACGATCAGT 58.216 41.667 0.00 0.00 0.00 3.41
211 212 6.571731 GCACCCATAATAGCTAACGATCAGTA 60.572 42.308 0.00 0.00 0.00 2.74
212 213 6.807230 CACCCATAATAGCTAACGATCAGTAC 59.193 42.308 0.00 0.00 0.00 2.73
213 214 6.028368 CCCATAATAGCTAACGATCAGTACG 58.972 44.000 0.00 0.00 0.00 3.67
214 215 6.349115 CCCATAATAGCTAACGATCAGTACGT 60.349 42.308 0.00 0.00 45.89 3.57
215 216 6.523546 CCATAATAGCTAACGATCAGTACGTG 59.476 42.308 0.00 0.00 43.16 4.49
216 217 2.190325 AGCTAACGATCAGTACGTGC 57.810 50.000 0.00 0.00 43.16 5.34
217 218 1.471287 AGCTAACGATCAGTACGTGCA 59.529 47.619 6.38 0.00 43.16 4.57
218 219 2.094906 AGCTAACGATCAGTACGTGCAA 60.095 45.455 6.38 0.00 43.16 4.08
219 220 2.027688 GCTAACGATCAGTACGTGCAAC 59.972 50.000 6.38 0.00 43.16 4.17
220 221 2.143008 AACGATCAGTACGTGCAACA 57.857 45.000 6.38 0.00 43.16 3.33
221 222 2.363788 ACGATCAGTACGTGCAACAT 57.636 45.000 6.38 0.00 42.37 2.71
222 223 2.259618 ACGATCAGTACGTGCAACATC 58.740 47.619 6.38 3.18 42.37 3.06
223 224 1.588404 CGATCAGTACGTGCAACATCC 59.412 52.381 6.38 0.00 35.74 3.51
224 225 2.735444 CGATCAGTACGTGCAACATCCT 60.735 50.000 6.38 0.00 35.74 3.24
225 226 2.363788 TCAGTACGTGCAACATCCTC 57.636 50.000 6.38 0.00 35.74 3.71
226 227 1.893137 TCAGTACGTGCAACATCCTCT 59.107 47.619 6.38 0.00 35.74 3.69
227 228 3.086282 TCAGTACGTGCAACATCCTCTA 58.914 45.455 6.38 0.00 35.74 2.43
228 229 3.699538 TCAGTACGTGCAACATCCTCTAT 59.300 43.478 6.38 0.00 35.74 1.98
229 230 4.159693 TCAGTACGTGCAACATCCTCTATT 59.840 41.667 6.38 0.00 35.74 1.73
230 231 4.504461 CAGTACGTGCAACATCCTCTATTC 59.496 45.833 6.38 0.00 35.74 1.75
231 232 3.610040 ACGTGCAACATCCTCTATTCA 57.390 42.857 0.00 0.00 35.74 2.57
232 233 4.142609 ACGTGCAACATCCTCTATTCAT 57.857 40.909 0.00 0.00 35.74 2.57
233 234 3.873361 ACGTGCAACATCCTCTATTCATG 59.127 43.478 0.00 0.00 35.74 3.07
234 235 3.873361 CGTGCAACATCCTCTATTCATGT 59.127 43.478 0.00 0.00 35.74 3.21
235 236 4.025396 CGTGCAACATCCTCTATTCATGTC 60.025 45.833 0.00 0.00 35.74 3.06
236 237 5.121811 GTGCAACATCCTCTATTCATGTCT 58.878 41.667 0.00 0.00 36.32 3.41
237 238 5.007430 GTGCAACATCCTCTATTCATGTCTG 59.993 44.000 0.00 0.00 36.32 3.51
238 239 5.121811 GCAACATCCTCTATTCATGTCTGT 58.878 41.667 0.00 0.00 30.22 3.41
239 240 5.587844 GCAACATCCTCTATTCATGTCTGTT 59.412 40.000 0.00 0.00 30.22 3.16
240 241 6.238320 GCAACATCCTCTATTCATGTCTGTTC 60.238 42.308 0.00 0.00 30.22 3.18
241 242 6.805016 ACATCCTCTATTCATGTCTGTTCT 57.195 37.500 0.00 0.00 0.00 3.01
242 243 7.904558 ACATCCTCTATTCATGTCTGTTCTA 57.095 36.000 0.00 0.00 0.00 2.10
243 244 8.489676 ACATCCTCTATTCATGTCTGTTCTAT 57.510 34.615 0.00 0.00 0.00 1.98
244 245 9.593565 ACATCCTCTATTCATGTCTGTTCTATA 57.406 33.333 0.00 0.00 0.00 1.31
246 247 8.116651 TCCTCTATTCATGTCTGTTCTATAGC 57.883 38.462 0.00 0.00 0.00 2.97
247 248 7.947332 TCCTCTATTCATGTCTGTTCTATAGCT 59.053 37.037 0.00 0.00 0.00 3.32
248 249 9.237187 CCTCTATTCATGTCTGTTCTATAGCTA 57.763 37.037 0.00 0.00 0.00 3.32
255 256 9.967346 TCATGTCTGTTCTATAGCTATTGTTAC 57.033 33.333 12.39 12.42 0.00 2.50
256 257 8.906693 CATGTCTGTTCTATAGCTATTGTTACG 58.093 37.037 12.39 9.10 0.00 3.18
257 258 7.993101 TGTCTGTTCTATAGCTATTGTTACGT 58.007 34.615 12.39 0.00 0.00 3.57
258 259 7.913821 TGTCTGTTCTATAGCTATTGTTACGTG 59.086 37.037 12.39 9.46 0.00 4.49
259 260 7.914346 GTCTGTTCTATAGCTATTGTTACGTGT 59.086 37.037 12.39 0.00 0.00 4.49
260 261 8.464404 TCTGTTCTATAGCTATTGTTACGTGTT 58.536 33.333 12.39 0.00 0.00 3.32
261 262 8.991243 TGTTCTATAGCTATTGTTACGTGTTT 57.009 30.769 12.39 0.00 0.00 2.83
262 263 8.865978 TGTTCTATAGCTATTGTTACGTGTTTG 58.134 33.333 12.39 0.00 0.00 2.93
263 264 7.459394 TCTATAGCTATTGTTACGTGTTTGC 57.541 36.000 12.39 0.00 0.00 3.68
264 265 7.262772 TCTATAGCTATTGTTACGTGTTTGCT 58.737 34.615 12.39 1.45 0.00 3.91
265 266 4.404507 AGCTATTGTTACGTGTTTGCTG 57.595 40.909 0.00 0.00 0.00 4.41
266 267 2.908626 GCTATTGTTACGTGTTTGCTGC 59.091 45.455 0.00 0.00 0.00 5.25
267 268 3.364964 GCTATTGTTACGTGTTTGCTGCT 60.365 43.478 0.00 0.00 0.00 4.24
268 269 2.466870 TTGTTACGTGTTTGCTGCTG 57.533 45.000 0.00 0.00 0.00 4.41
269 270 1.374560 TGTTACGTGTTTGCTGCTGT 58.625 45.000 0.00 0.00 0.00 4.40
270 271 1.740585 TGTTACGTGTTTGCTGCTGTT 59.259 42.857 0.00 0.00 0.00 3.16
271 272 2.937149 TGTTACGTGTTTGCTGCTGTTA 59.063 40.909 0.00 0.00 0.00 2.41
272 273 3.562141 TGTTACGTGTTTGCTGCTGTTAT 59.438 39.130 0.00 0.00 0.00 1.89
273 274 2.686558 ACGTGTTTGCTGCTGTTATG 57.313 45.000 0.00 0.00 0.00 1.90
274 275 1.330306 CGTGTTTGCTGCTGTTATGC 58.670 50.000 0.00 0.00 0.00 3.14
275 276 1.334870 CGTGTTTGCTGCTGTTATGCA 60.335 47.619 0.00 0.00 41.05 3.96
276 277 2.669113 CGTGTTTGCTGCTGTTATGCAT 60.669 45.455 3.79 3.79 42.48 3.96
277 278 2.664568 GTGTTTGCTGCTGTTATGCATG 59.335 45.455 10.16 0.00 42.48 4.06
278 279 2.296752 TGTTTGCTGCTGTTATGCATGT 59.703 40.909 10.16 0.00 42.48 3.21
279 280 2.919229 GTTTGCTGCTGTTATGCATGTC 59.081 45.455 10.16 2.63 42.48 3.06
280 281 2.118313 TGCTGCTGTTATGCATGTCT 57.882 45.000 10.16 0.00 42.48 3.41
281 282 2.439409 TGCTGCTGTTATGCATGTCTT 58.561 42.857 10.16 0.00 42.48 3.01
282 283 2.162809 TGCTGCTGTTATGCATGTCTTG 59.837 45.455 10.16 0.00 42.48 3.02
297 298 6.551385 CATGTCTTGCTGTTCTTCTAGTTT 57.449 37.500 0.00 0.00 0.00 2.66
298 299 5.991328 TGTCTTGCTGTTCTTCTAGTTTG 57.009 39.130 0.00 0.00 0.00 2.93
299 300 4.273480 TGTCTTGCTGTTCTTCTAGTTTGC 59.727 41.667 0.00 0.00 0.00 3.68
300 301 4.513318 GTCTTGCTGTTCTTCTAGTTTGCT 59.487 41.667 0.00 0.00 0.00 3.91
301 302 5.696724 GTCTTGCTGTTCTTCTAGTTTGCTA 59.303 40.000 0.00 0.00 0.00 3.49
302 303 5.928839 TCTTGCTGTTCTTCTAGTTTGCTAG 59.071 40.000 0.00 0.00 44.60 3.42
314 315 7.194607 TCTAGTTTGCTAGATTATTGCATGC 57.805 36.000 11.82 11.82 46.25 4.06
315 316 6.994496 TCTAGTTTGCTAGATTATTGCATGCT 59.006 34.615 20.33 1.26 46.25 3.79
316 317 8.150296 TCTAGTTTGCTAGATTATTGCATGCTA 58.850 33.333 20.33 12.49 46.25 3.49
317 318 7.199541 AGTTTGCTAGATTATTGCATGCTAG 57.800 36.000 20.33 11.08 39.44 3.42
318 319 6.769822 AGTTTGCTAGATTATTGCATGCTAGT 59.230 34.615 20.33 7.25 39.44 2.57
319 320 7.933577 AGTTTGCTAGATTATTGCATGCTAGTA 59.066 33.333 20.33 6.90 39.44 1.82
320 321 8.725148 GTTTGCTAGATTATTGCATGCTAGTAT 58.275 33.333 20.33 8.74 39.44 2.12
321 322 8.484641 TTGCTAGATTATTGCATGCTAGTATC 57.515 34.615 20.33 16.54 39.44 2.24
322 323 7.845037 TGCTAGATTATTGCATGCTAGTATCT 58.155 34.615 20.33 21.74 34.60 1.98
323 324 7.978414 TGCTAGATTATTGCATGCTAGTATCTC 59.022 37.037 22.52 14.61 34.60 2.75
324 325 8.196771 GCTAGATTATTGCATGCTAGTATCTCT 58.803 37.037 22.52 16.16 33.01 3.10
327 328 8.814931 AGATTATTGCATGCTAGTATCTCTTCT 58.185 33.333 20.33 5.38 0.00 2.85
330 331 6.968263 TTGCATGCTAGTATCTCTTCTAGT 57.032 37.500 20.33 0.00 36.84 2.57
331 332 6.567687 TGCATGCTAGTATCTCTTCTAGTC 57.432 41.667 20.33 0.00 36.84 2.59
332 333 6.064717 TGCATGCTAGTATCTCTTCTAGTCA 58.935 40.000 20.33 0.00 36.84 3.41
333 334 6.718912 TGCATGCTAGTATCTCTTCTAGTCAT 59.281 38.462 20.33 0.00 36.84 3.06
334 335 7.885399 TGCATGCTAGTATCTCTTCTAGTCATA 59.115 37.037 20.33 0.00 36.84 2.15
335 336 8.735315 GCATGCTAGTATCTCTTCTAGTCATAA 58.265 37.037 11.37 0.00 36.84 1.90
365 366 9.807649 ATTTACTGGAATTAATCATGAACTTGC 57.192 29.630 0.00 0.00 0.00 4.01
366 367 6.212888 ACTGGAATTAATCATGAACTTGCC 57.787 37.500 0.00 0.00 0.00 4.52
367 368 5.954150 ACTGGAATTAATCATGAACTTGCCT 59.046 36.000 0.00 0.00 0.00 4.75
368 369 7.118723 ACTGGAATTAATCATGAACTTGCCTA 58.881 34.615 0.00 0.00 0.00 3.93
369 370 7.615365 ACTGGAATTAATCATGAACTTGCCTAA 59.385 33.333 0.00 0.00 0.00 2.69
370 371 8.537728 TGGAATTAATCATGAACTTGCCTAAT 57.462 30.769 0.00 0.00 0.00 1.73
371 372 9.639563 TGGAATTAATCATGAACTTGCCTAATA 57.360 29.630 0.00 0.00 0.00 0.98
376 377 9.639563 TTAATCATGAACTTGCCTAATATTCCA 57.360 29.630 0.00 0.00 0.00 3.53
377 378 8.537728 AATCATGAACTTGCCTAATATTCCAA 57.462 30.769 0.00 0.00 0.00 3.53
378 379 8.716674 ATCATGAACTTGCCTAATATTCCAAT 57.283 30.769 0.00 0.00 0.00 3.16
379 380 9.812347 ATCATGAACTTGCCTAATATTCCAATA 57.188 29.630 0.00 0.00 0.00 1.90
380 381 9.288576 TCATGAACTTGCCTAATATTCCAATAG 57.711 33.333 0.00 0.00 0.00 1.73
381 382 9.288576 CATGAACTTGCCTAATATTCCAATAGA 57.711 33.333 0.00 0.00 0.00 1.98
727 728 1.083141 GAGGAGGGGGAAGGGAAGT 59.917 63.158 0.00 0.00 0.00 3.01
755 756 2.583520 CTGCAGTGGAGGAGGAGC 59.416 66.667 5.25 0.00 0.00 4.70
782 783 4.164988 TGGAAAAGGAAAAGGAAATTGGCA 59.835 37.500 0.00 0.00 0.00 4.92
827 829 4.833380 AGGAAAAAGGCTAGAAAGGGAAAC 59.167 41.667 0.00 0.00 0.00 2.78
893 905 0.680061 AAGGAGTCGTTTCGCTTCCT 59.320 50.000 7.89 7.89 39.63 3.36
895 907 1.201880 AGGAGTCGTTTCGCTTCCTAC 59.798 52.381 10.67 0.00 37.54 3.18
902 914 1.464997 GTTTCGCTTCCTACCTTGCAG 59.535 52.381 0.00 0.00 0.00 4.41
903 915 0.673644 TTCGCTTCCTACCTTGCAGC 60.674 55.000 0.00 0.00 0.00 5.25
904 916 2.109126 CGCTTCCTACCTTGCAGCC 61.109 63.158 0.00 0.00 0.00 4.85
905 917 1.002134 GCTTCCTACCTTGCAGCCA 60.002 57.895 0.00 0.00 0.00 4.75
906 918 0.609131 GCTTCCTACCTTGCAGCCAA 60.609 55.000 0.00 0.00 0.00 4.52
907 919 1.957113 GCTTCCTACCTTGCAGCCAAT 60.957 52.381 0.00 0.00 0.00 3.16
1366 1473 2.742372 CGTCAAGCCCTTCACCCG 60.742 66.667 0.00 0.00 0.00 5.28
1430 1537 4.457496 CGCTGGTCCACCATCGCT 62.457 66.667 8.92 0.00 46.48 4.93
1450 1557 4.162690 GTTCCTCTCCGGCCGCAT 62.163 66.667 22.85 0.00 0.00 4.73
1634 3453 1.690219 ATGTCAGGATGTCCCCTCGC 61.690 60.000 0.00 0.00 37.40 5.03
1989 3899 5.825532 TCCATTGGATCTTGGTATCAACAA 58.174 37.500 0.00 0.00 34.48 2.83
2034 3944 5.873164 CGTCTTACTTGCTGGTTAGGTAATT 59.127 40.000 0.00 0.00 0.00 1.40
2082 4605 5.874895 TCTTTGTGCTTCTTGATGATCAG 57.125 39.130 0.09 0.00 0.00 2.90
2104 4627 6.423905 TCAGGAAAATTCTGAACGTCTTGTAG 59.576 38.462 0.00 0.00 38.20 2.74
2216 5430 5.808366 TGACCCTCTGTATATAAAGCCAG 57.192 43.478 0.00 0.00 0.00 4.85
2217 5431 5.464069 TGACCCTCTGTATATAAAGCCAGA 58.536 41.667 0.00 0.00 33.22 3.86
2295 5511 6.372659 CGAAAAGGATCCTTCTGATTCTCAAA 59.627 38.462 27.20 0.00 38.45 2.69
2298 5514 6.633325 AGGATCCTTCTGATTCTCAAAGAA 57.367 37.500 9.02 0.00 33.73 2.52
2310 5526 2.220653 TCAAAGAATGAGGGGCAAGG 57.779 50.000 0.00 0.00 33.04 3.61
2333 5549 5.239525 GGGGATTGATACGGAGAAAGATTTG 59.760 44.000 0.00 0.00 0.00 2.32
2555 5773 7.810766 CAACCTTGCAACGTGATTAAAATAT 57.189 32.000 0.00 0.00 0.00 1.28
2613 5846 8.932434 TTTATAACCAGCCATAGCATATGAAA 57.068 30.769 6.97 0.00 43.56 2.69
2667 5900 5.477984 ACAGGACACAACATAGCAAATTCAT 59.522 36.000 0.00 0.00 0.00 2.57
2671 5904 8.246180 AGGACACAACATAGCAAATTCATAAAG 58.754 33.333 0.00 0.00 0.00 1.85
2679 5912 8.416329 ACATAGCAAATTCATAAAGGTTCATCC 58.584 33.333 0.00 0.00 0.00 3.51
2725 6037 6.744802 ATATAAGATAGTGAGAGGGGGAGT 57.255 41.667 0.00 0.00 0.00 3.85
2726 6038 3.786213 AAGATAGTGAGAGGGGGAGTT 57.214 47.619 0.00 0.00 0.00 3.01
2760 6072 2.612430 TCGCCAATCCCTTCCCCA 60.612 61.111 0.00 0.00 0.00 4.96
2848 6160 0.530744 TCGGTAGTGGTGCTGATGTC 59.469 55.000 0.00 0.00 0.00 3.06
2857 6169 0.320771 GTGCTGATGTCGTTGGAGGT 60.321 55.000 0.00 0.00 0.00 3.85
2873 6185 3.523157 TGGAGGTGGATAAAGATGAGCAA 59.477 43.478 0.00 0.00 0.00 3.91
2881 6193 2.895242 AAAGATGAGCAAAGGAGCCT 57.105 45.000 0.00 0.00 34.23 4.58
2890 6202 2.156098 AAAGGAGCCTGGCCAGACA 61.156 57.895 34.91 0.00 0.00 3.41
2924 6236 2.250924 CCTCCTCCTTGGCATTTTTGT 58.749 47.619 0.00 0.00 35.26 2.83
2925 6237 2.028748 CCTCCTCCTTGGCATTTTTGTG 60.029 50.000 0.00 0.00 35.26 3.33
2926 6238 1.344114 TCCTCCTTGGCATTTTTGTGC 59.656 47.619 0.00 0.00 44.31 4.57
2932 6244 3.111442 GCATTTTTGTGCCGGCGG 61.111 61.111 24.35 24.35 39.18 6.13
2947 6259 4.445545 CGGCAGGCGTTCGCTTTC 62.446 66.667 16.40 3.84 0.00 2.62
2948 6260 4.445545 GGCAGGCGTTCGCTTTCG 62.446 66.667 16.40 0.18 0.00 3.46
2954 6266 2.772189 CGTTCGCTTTCGCTGAGG 59.228 61.111 0.00 0.00 35.26 3.86
2955 6267 2.022129 CGTTCGCTTTCGCTGAGGT 61.022 57.895 0.00 0.00 35.26 3.85
2956 6268 1.493311 GTTCGCTTTCGCTGAGGTG 59.507 57.895 0.00 0.00 35.26 4.00
2957 6269 0.944311 GTTCGCTTTCGCTGAGGTGA 60.944 55.000 0.00 0.00 35.26 4.02
2958 6270 0.249699 TTCGCTTTCGCTGAGGTGAA 60.250 50.000 0.00 0.00 39.78 3.18
2959 6271 0.667487 TCGCTTTCGCTGAGGTGAAG 60.667 55.000 0.00 0.00 41.99 3.02
2960 6272 1.630244 CGCTTTCGCTGAGGTGAAGG 61.630 60.000 0.00 0.00 41.99 3.46
2961 6273 0.320771 GCTTTCGCTGAGGTGAAGGA 60.321 55.000 5.78 0.00 41.99 3.36
2962 6274 1.433534 CTTTCGCTGAGGTGAAGGAC 58.566 55.000 0.00 0.00 41.99 3.85
2963 6275 0.034896 TTTCGCTGAGGTGAAGGACC 59.965 55.000 0.00 0.00 46.58 4.46
2971 6283 3.165606 GGTGAAGGACCAGCAGATG 57.834 57.895 0.00 0.00 45.34 2.90
2972 6284 0.615331 GGTGAAGGACCAGCAGATGA 59.385 55.000 0.00 0.00 45.34 2.92
2973 6285 1.211457 GGTGAAGGACCAGCAGATGAT 59.789 52.381 0.00 0.00 45.34 2.45
2974 6286 2.286872 GTGAAGGACCAGCAGATGATG 58.713 52.381 0.00 0.00 0.00 3.07
2975 6287 1.911357 TGAAGGACCAGCAGATGATGT 59.089 47.619 0.00 0.00 0.00 3.06
2976 6288 2.093288 TGAAGGACCAGCAGATGATGTC 60.093 50.000 0.00 0.00 0.00 3.06
2977 6289 1.576577 AGGACCAGCAGATGATGTCA 58.423 50.000 0.00 0.00 0.00 3.58
2978 6290 1.209019 AGGACCAGCAGATGATGTCAC 59.791 52.381 0.00 0.00 0.00 3.67
2979 6291 1.284657 GACCAGCAGATGATGTCACG 58.715 55.000 0.00 0.00 0.00 4.35
2980 6292 0.107993 ACCAGCAGATGATGTCACGG 60.108 55.000 0.00 0.00 0.00 4.94
2981 6293 0.176449 CCAGCAGATGATGTCACGGA 59.824 55.000 0.00 0.00 0.00 4.69
2982 6294 1.568606 CAGCAGATGATGTCACGGAG 58.431 55.000 0.00 0.00 0.00 4.63
2983 6295 0.463204 AGCAGATGATGTCACGGAGG 59.537 55.000 0.00 0.00 0.00 4.30
2984 6296 0.461548 GCAGATGATGTCACGGAGGA 59.538 55.000 0.00 0.00 0.00 3.71
2985 6297 1.537776 GCAGATGATGTCACGGAGGAG 60.538 57.143 0.00 0.00 0.00 3.69
2986 6298 1.068281 CAGATGATGTCACGGAGGAGG 59.932 57.143 0.00 0.00 0.00 4.30
2987 6299 1.115467 GATGATGTCACGGAGGAGGT 58.885 55.000 0.00 0.00 0.00 3.85
2988 6300 1.067821 GATGATGTCACGGAGGAGGTC 59.932 57.143 0.00 0.00 0.00 3.85
2989 6301 1.313091 TGATGTCACGGAGGAGGTCG 61.313 60.000 0.00 0.00 0.00 4.79
2990 6302 1.304217 ATGTCACGGAGGAGGTCGT 60.304 57.895 0.00 0.00 40.49 4.34
2991 6303 1.313812 ATGTCACGGAGGAGGTCGTC 61.314 60.000 0.00 0.00 37.53 4.20
2992 6304 1.674980 GTCACGGAGGAGGTCGTCT 60.675 63.158 0.09 0.00 37.53 4.18
2993 6305 1.074423 TCACGGAGGAGGTCGTCTT 59.926 57.895 0.09 0.00 37.53 3.01
2994 6306 0.959372 TCACGGAGGAGGTCGTCTTC 60.959 60.000 0.09 0.00 37.53 2.87
2995 6307 1.074423 ACGGAGGAGGTCGTCTTCA 59.926 57.895 6.94 0.00 34.20 3.02
2996 6308 0.961358 ACGGAGGAGGTCGTCTTCAG 60.961 60.000 6.94 5.35 34.20 3.02
2997 6309 0.677098 CGGAGGAGGTCGTCTTCAGA 60.677 60.000 6.94 0.00 32.77 3.27
2998 6310 1.099689 GGAGGAGGTCGTCTTCAGAG 58.900 60.000 6.94 0.00 32.77 3.35
2999 6311 1.614850 GGAGGAGGTCGTCTTCAGAGT 60.615 57.143 6.94 0.00 32.77 3.24
3000 6312 1.741145 GAGGAGGTCGTCTTCAGAGTC 59.259 57.143 0.17 0.00 31.43 3.36
3001 6313 0.448593 GGAGGTCGTCTTCAGAGTCG 59.551 60.000 0.00 0.00 36.07 4.18
3002 6314 0.448593 GAGGTCGTCTTCAGAGTCGG 59.551 60.000 0.00 0.00 35.57 4.79
3003 6315 1.153997 GGTCGTCTTCAGAGTCGGC 60.154 63.158 0.00 0.00 38.12 5.54
3004 6316 1.579932 GTCGTCTTCAGAGTCGGCA 59.420 57.895 0.00 0.00 38.58 5.69
3005 6317 0.039437 GTCGTCTTCAGAGTCGGCAA 60.039 55.000 0.00 0.00 38.58 4.52
3006 6318 0.241213 TCGTCTTCAGAGTCGGCAAG 59.759 55.000 0.00 0.00 35.57 4.01
3007 6319 1.347817 CGTCTTCAGAGTCGGCAAGC 61.348 60.000 0.00 0.00 32.06 4.01
3008 6320 1.080501 TCTTCAGAGTCGGCAAGCG 60.081 57.895 0.00 0.00 0.00 4.68
3009 6321 2.048222 TTCAGAGTCGGCAAGCGG 60.048 61.111 0.00 0.00 0.00 5.52
3010 6322 2.492449 CTTCAGAGTCGGCAAGCGGA 62.492 60.000 0.00 0.00 0.00 5.54
3011 6323 2.048222 CAGAGTCGGCAAGCGGAA 60.048 61.111 3.80 0.00 0.00 4.30
3012 6324 2.097038 CAGAGTCGGCAAGCGGAAG 61.097 63.158 3.80 0.00 0.00 3.46
3031 6343 3.917760 GGCTCGGTCCCGGATCTG 61.918 72.222 0.73 0.00 40.25 2.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.857364 CAAAGACGAACGGTTCCGG 59.143 57.895 14.83 0.00 0.00 5.14
1 2 1.203313 GCAAAGACGAACGGTTCCG 59.797 57.895 14.83 9.81 0.00 4.30
2 3 1.203313 CGCAAAGACGAACGGTTCC 59.797 57.895 14.83 2.41 34.06 3.62
6 7 0.736325 AGGATCGCAAAGACGAACGG 60.736 55.000 0.00 0.00 46.59 4.44
7 8 0.366871 CAGGATCGCAAAGACGAACG 59.633 55.000 0.00 0.00 46.59 3.95
8 9 0.095417 GCAGGATCGCAAAGACGAAC 59.905 55.000 0.00 0.00 46.59 3.95
9 10 0.320334 TGCAGGATCGCAAAGACGAA 60.320 50.000 0.00 0.00 46.59 3.85
10 11 1.014044 GTGCAGGATCGCAAAGACGA 61.014 55.000 0.00 0.00 45.14 4.20
11 12 1.421485 GTGCAGGATCGCAAAGACG 59.579 57.895 0.00 0.00 45.14 4.18
12 13 1.796796 GGTGCAGGATCGCAAAGAC 59.203 57.895 0.00 0.00 45.14 3.01
13 14 1.741401 CGGTGCAGGATCGCAAAGA 60.741 57.895 0.00 0.00 45.14 2.52
14 15 2.753966 CCGGTGCAGGATCGCAAAG 61.754 63.158 0.00 0.00 45.14 2.77
15 16 2.745884 CCGGTGCAGGATCGCAAA 60.746 61.111 0.00 0.00 45.14 3.68
16 17 4.776322 CCCGGTGCAGGATCGCAA 62.776 66.667 0.00 0.00 45.14 4.85
18 19 4.899239 CTCCCGGTGCAGGATCGC 62.899 72.222 0.00 0.00 31.48 4.58
19 20 3.144120 CTCTCCCGGTGCAGGATCG 62.144 68.421 0.00 0.00 31.48 3.69
20 21 2.801631 CCTCTCCCGGTGCAGGATC 61.802 68.421 0.00 0.00 31.48 3.36
21 22 2.765807 CCTCTCCCGGTGCAGGAT 60.766 66.667 0.00 0.00 31.48 3.24
22 23 3.992641 TCCTCTCCCGGTGCAGGA 61.993 66.667 8.16 8.16 32.30 3.86
23 24 3.775654 GTCCTCTCCCGGTGCAGG 61.776 72.222 0.00 1.62 0.00 4.85
24 25 4.135153 CGTCCTCTCCCGGTGCAG 62.135 72.222 0.00 0.00 0.00 4.41
25 26 4.671590 TCGTCCTCTCCCGGTGCA 62.672 66.667 0.00 0.00 0.00 4.57
26 27 2.240162 AATTCGTCCTCTCCCGGTGC 62.240 60.000 0.00 0.00 0.00 5.01
27 28 1.067212 CTAATTCGTCCTCTCCCGGTG 59.933 57.143 0.00 0.00 0.00 4.94
28 29 1.064166 TCTAATTCGTCCTCTCCCGGT 60.064 52.381 0.00 0.00 0.00 5.28
29 30 1.688772 TCTAATTCGTCCTCTCCCGG 58.311 55.000 0.00 0.00 0.00 5.73
30 31 4.323553 AAATCTAATTCGTCCTCTCCCG 57.676 45.455 0.00 0.00 0.00 5.14
31 32 5.297029 CCAAAAATCTAATTCGTCCTCTCCC 59.703 44.000 0.00 0.00 0.00 4.30
32 33 5.297029 CCCAAAAATCTAATTCGTCCTCTCC 59.703 44.000 0.00 0.00 0.00 3.71
33 34 6.113411 TCCCAAAAATCTAATTCGTCCTCTC 58.887 40.000 0.00 0.00 0.00 3.20
34 35 6.062258 TCCCAAAAATCTAATTCGTCCTCT 57.938 37.500 0.00 0.00 0.00 3.69
35 36 6.678164 GCTTCCCAAAAATCTAATTCGTCCTC 60.678 42.308 0.00 0.00 0.00 3.71
36 37 5.125578 GCTTCCCAAAAATCTAATTCGTCCT 59.874 40.000 0.00 0.00 0.00 3.85
37 38 5.340803 GCTTCCCAAAAATCTAATTCGTCC 58.659 41.667 0.00 0.00 0.00 4.79
38 39 5.028375 CGCTTCCCAAAAATCTAATTCGTC 58.972 41.667 0.00 0.00 0.00 4.20
39 40 4.674362 GCGCTTCCCAAAAATCTAATTCGT 60.674 41.667 0.00 0.00 0.00 3.85
40 41 3.791353 GCGCTTCCCAAAAATCTAATTCG 59.209 43.478 0.00 0.00 0.00 3.34
41 42 4.800471 CAGCGCTTCCCAAAAATCTAATTC 59.200 41.667 7.50 0.00 0.00 2.17
42 43 4.220602 ACAGCGCTTCCCAAAAATCTAATT 59.779 37.500 7.50 0.00 0.00 1.40
43 44 3.763897 ACAGCGCTTCCCAAAAATCTAAT 59.236 39.130 7.50 0.00 0.00 1.73
44 45 3.057596 CACAGCGCTTCCCAAAAATCTAA 60.058 43.478 7.50 0.00 0.00 2.10
45 46 2.487762 CACAGCGCTTCCCAAAAATCTA 59.512 45.455 7.50 0.00 0.00 1.98
46 47 1.270550 CACAGCGCTTCCCAAAAATCT 59.729 47.619 7.50 0.00 0.00 2.40
47 48 1.701704 CACAGCGCTTCCCAAAAATC 58.298 50.000 7.50 0.00 0.00 2.17
48 49 0.319813 GCACAGCGCTTCCCAAAAAT 60.320 50.000 7.50 0.00 37.77 1.82
49 50 1.067250 GCACAGCGCTTCCCAAAAA 59.933 52.632 7.50 0.00 37.77 1.94
50 51 2.727544 GCACAGCGCTTCCCAAAA 59.272 55.556 7.50 0.00 37.77 2.44
65 66 1.497278 GAATTTGAGCAGTCGCGCA 59.503 52.632 8.75 0.00 46.96 6.09
66 67 1.578618 CGAATTTGAGCAGTCGCGC 60.579 57.895 0.00 0.00 45.49 6.86
67 68 0.246912 GACGAATTTGAGCAGTCGCG 60.247 55.000 0.00 0.00 45.49 5.87
68 69 0.790207 TGACGAATTTGAGCAGTCGC 59.210 50.000 0.00 0.00 36.99 5.19
69 70 2.667969 TGATGACGAATTTGAGCAGTCG 59.332 45.455 0.00 0.00 39.37 4.18
70 71 3.996032 GTGATGACGAATTTGAGCAGTC 58.004 45.455 0.00 0.00 0.00 3.51
83 84 0.797249 GAAGACGACCCGTGATGACG 60.797 60.000 0.00 0.00 41.37 4.35
84 85 0.458025 GGAAGACGACCCGTGATGAC 60.458 60.000 0.00 0.00 41.37 3.06
85 86 1.888018 GGAAGACGACCCGTGATGA 59.112 57.895 0.00 0.00 41.37 2.92
86 87 4.496670 GGAAGACGACCCGTGATG 57.503 61.111 0.00 0.00 41.37 3.07
106 107 4.077184 TAGCACCGCCCGACTTGG 62.077 66.667 0.00 0.00 37.55 3.61
107 108 2.813908 GTAGCACCGCCCGACTTG 60.814 66.667 0.00 0.00 0.00 3.16
108 109 2.995574 AGTAGCACCGCCCGACTT 60.996 61.111 0.00 0.00 0.00 3.01
109 110 3.450115 GAGTAGCACCGCCCGACT 61.450 66.667 0.00 0.00 0.00 4.18
110 111 2.955751 GATGAGTAGCACCGCCCGAC 62.956 65.000 0.00 0.00 0.00 4.79
111 112 2.758327 ATGAGTAGCACCGCCCGA 60.758 61.111 0.00 0.00 0.00 5.14
112 113 2.279517 GATGAGTAGCACCGCCCG 60.280 66.667 0.00 0.00 0.00 6.13
113 114 2.279517 CGATGAGTAGCACCGCCC 60.280 66.667 0.00 0.00 0.00 6.13
114 115 1.589196 GACGATGAGTAGCACCGCC 60.589 63.158 0.00 0.00 0.00 6.13
115 116 1.939785 CGACGATGAGTAGCACCGC 60.940 63.158 0.00 0.00 0.00 5.68
116 117 0.654160 TACGACGATGAGTAGCACCG 59.346 55.000 0.00 0.00 0.00 4.94
117 118 3.242969 TGAATACGACGATGAGTAGCACC 60.243 47.826 0.00 0.00 0.00 5.01
118 119 3.948851 TGAATACGACGATGAGTAGCAC 58.051 45.455 0.00 0.00 0.00 4.40
119 120 4.610680 CGATGAATACGACGATGAGTAGCA 60.611 45.833 0.00 0.00 0.00 3.49
120 121 3.841317 CGATGAATACGACGATGAGTAGC 59.159 47.826 0.00 0.00 0.00 3.58
121 122 3.841317 GCGATGAATACGACGATGAGTAG 59.159 47.826 0.00 0.00 0.00 2.57
122 123 3.364664 GGCGATGAATACGACGATGAGTA 60.365 47.826 0.00 0.00 0.00 2.59
123 124 2.604855 GGCGATGAATACGACGATGAGT 60.605 50.000 0.00 0.00 0.00 3.41
124 125 1.979469 GGCGATGAATACGACGATGAG 59.021 52.381 0.00 0.00 0.00 2.90
125 126 2.046283 GGCGATGAATACGACGATGA 57.954 50.000 0.00 0.00 0.00 2.92
130 131 1.121240 CTGACGGCGATGAATACGAC 58.879 55.000 16.62 0.00 35.25 4.34
131 132 0.594028 GCTGACGGCGATGAATACGA 60.594 55.000 16.62 0.00 0.00 3.43
132 133 0.869880 TGCTGACGGCGATGAATACG 60.870 55.000 16.62 0.00 45.43 3.06
133 134 0.855349 CTGCTGACGGCGATGAATAC 59.145 55.000 16.62 0.00 45.43 1.89
134 135 0.875908 GCTGCTGACGGCGATGAATA 60.876 55.000 16.62 0.00 45.43 1.75
135 136 2.176273 GCTGCTGACGGCGATGAAT 61.176 57.895 16.62 0.00 45.43 2.57
136 137 2.815211 GCTGCTGACGGCGATGAA 60.815 61.111 16.62 0.00 45.43 2.57
143 144 1.446792 AACGATCTGCTGCTGACGG 60.447 57.895 23.44 16.31 0.00 4.79
144 145 1.706301 CAACGATCTGCTGCTGACG 59.294 57.895 20.52 20.52 0.00 4.35
145 146 1.423056 GCAACGATCTGCTGCTGAC 59.577 57.895 11.54 5.43 39.34 3.51
146 147 1.742880 GGCAACGATCTGCTGCTGA 60.743 57.895 11.69 11.69 42.25 4.26
147 148 1.579964 TTGGCAACGATCTGCTGCTG 61.580 55.000 6.87 0.00 42.25 4.41
148 149 1.302752 TTGGCAACGATCTGCTGCT 60.303 52.632 6.87 0.00 42.25 4.24
149 150 1.154150 GTTGGCAACGATCTGCTGC 60.154 57.895 15.49 5.81 42.25 5.25
150 151 0.806868 ATGTTGGCAACGATCTGCTG 59.193 50.000 24.03 0.00 42.25 4.41
151 152 1.089920 GATGTTGGCAACGATCTGCT 58.910 50.000 24.03 3.94 42.25 4.24
152 153 0.247814 CGATGTTGGCAACGATCTGC 60.248 55.000 24.03 9.27 42.37 4.26
153 154 1.061131 GACGATGTTGGCAACGATCTG 59.939 52.381 24.03 21.01 42.37 2.90
154 155 1.337728 TGACGATGTTGGCAACGATCT 60.338 47.619 24.03 15.85 42.37 2.75
155 156 1.075542 TGACGATGTTGGCAACGATC 58.924 50.000 24.03 22.89 42.37 3.69
156 157 1.665679 GATGACGATGTTGGCAACGAT 59.334 47.619 24.03 17.91 42.37 3.73
157 158 1.075542 GATGACGATGTTGGCAACGA 58.924 50.000 24.03 14.20 42.37 3.85
158 159 0.795698 TGATGACGATGTTGGCAACG 59.204 50.000 24.03 15.53 44.73 4.10
159 160 2.031245 TGTTGATGACGATGTTGGCAAC 60.031 45.455 23.12 23.12 35.85 4.17
160 161 2.031245 GTGTTGATGACGATGTTGGCAA 60.031 45.455 0.00 0.00 0.00 4.52
161 162 1.535028 GTGTTGATGACGATGTTGGCA 59.465 47.619 0.00 0.00 0.00 4.92
162 163 1.806542 AGTGTTGATGACGATGTTGGC 59.193 47.619 0.00 0.00 0.00 4.52
163 164 2.807967 ACAGTGTTGATGACGATGTTGG 59.192 45.455 0.00 0.00 0.00 3.77
164 165 3.422214 CGACAGTGTTGATGACGATGTTG 60.422 47.826 4.29 0.00 37.91 3.33
165 166 2.731451 CGACAGTGTTGATGACGATGTT 59.269 45.455 4.29 0.00 37.91 2.71
166 167 2.328473 CGACAGTGTTGATGACGATGT 58.672 47.619 4.29 0.00 37.91 3.06
167 168 1.059692 GCGACAGTGTTGATGACGATG 59.940 52.381 15.07 0.00 37.91 3.84
168 169 1.336795 TGCGACAGTGTTGATGACGAT 60.337 47.619 15.07 0.00 37.91 3.73
169 170 0.031449 TGCGACAGTGTTGATGACGA 59.969 50.000 15.07 0.00 37.91 4.20
170 171 0.161658 GTGCGACAGTGTTGATGACG 59.838 55.000 15.07 5.06 38.54 4.35
171 172 0.512952 GGTGCGACAGTGTTGATGAC 59.487 55.000 15.07 6.91 0.00 3.06
172 173 0.602638 GGGTGCGACAGTGTTGATGA 60.603 55.000 15.07 0.00 0.00 2.92
173 174 0.884259 TGGGTGCGACAGTGTTGATG 60.884 55.000 15.07 0.00 0.00 3.07
174 175 0.036732 ATGGGTGCGACAGTGTTGAT 59.963 50.000 15.07 0.00 0.00 2.57
175 176 0.682292 TATGGGTGCGACAGTGTTGA 59.318 50.000 15.07 0.00 0.00 3.18
176 177 1.518325 TTATGGGTGCGACAGTGTTG 58.482 50.000 6.11 6.11 0.00 3.33
177 178 2.489938 ATTATGGGTGCGACAGTGTT 57.510 45.000 0.00 0.00 0.00 3.32
178 179 2.741878 GCTATTATGGGTGCGACAGTGT 60.742 50.000 0.00 0.00 0.00 3.55
179 180 1.867233 GCTATTATGGGTGCGACAGTG 59.133 52.381 0.00 0.00 0.00 3.66
180 181 1.762957 AGCTATTATGGGTGCGACAGT 59.237 47.619 0.00 0.00 0.00 3.55
181 182 2.533266 AGCTATTATGGGTGCGACAG 57.467 50.000 0.00 0.00 0.00 3.51
182 183 3.724374 GTTAGCTATTATGGGTGCGACA 58.276 45.455 0.00 0.00 0.00 4.35
183 184 2.729882 CGTTAGCTATTATGGGTGCGAC 59.270 50.000 0.00 0.00 0.00 5.19
184 185 2.624364 TCGTTAGCTATTATGGGTGCGA 59.376 45.455 0.00 5.56 0.00 5.10
185 186 3.021269 TCGTTAGCTATTATGGGTGCG 57.979 47.619 0.00 0.00 0.00 5.34
186 187 4.566004 TGATCGTTAGCTATTATGGGTGC 58.434 43.478 0.00 0.00 0.00 5.01
187 188 5.784177 ACTGATCGTTAGCTATTATGGGTG 58.216 41.667 0.00 0.00 0.00 4.61
188 189 6.349115 CGTACTGATCGTTAGCTATTATGGGT 60.349 42.308 0.00 0.00 0.00 4.51
189 190 6.028368 CGTACTGATCGTTAGCTATTATGGG 58.972 44.000 0.00 0.00 0.00 4.00
190 191 6.523546 CACGTACTGATCGTTAGCTATTATGG 59.476 42.308 0.00 0.00 39.55 2.74
191 192 6.032565 GCACGTACTGATCGTTAGCTATTATG 59.967 42.308 0.00 0.00 39.55 1.90
192 193 6.084925 GCACGTACTGATCGTTAGCTATTAT 58.915 40.000 0.00 0.00 39.55 1.28
193 194 5.007921 TGCACGTACTGATCGTTAGCTATTA 59.992 40.000 0.00 0.00 39.55 0.98
194 195 4.201980 TGCACGTACTGATCGTTAGCTATT 60.202 41.667 0.00 0.00 39.55 1.73
195 196 3.314357 TGCACGTACTGATCGTTAGCTAT 59.686 43.478 0.00 0.00 39.55 2.97
196 197 2.679336 TGCACGTACTGATCGTTAGCTA 59.321 45.455 0.00 0.00 39.55 3.32
197 198 1.471287 TGCACGTACTGATCGTTAGCT 59.529 47.619 0.00 0.00 39.55 3.32
198 199 1.904144 TGCACGTACTGATCGTTAGC 58.096 50.000 0.00 0.00 39.55 3.09
199 200 3.239254 TGTTGCACGTACTGATCGTTAG 58.761 45.455 0.00 0.00 39.55 2.34
200 201 3.285816 TGTTGCACGTACTGATCGTTA 57.714 42.857 0.00 0.00 39.55 3.18
201 202 2.143008 TGTTGCACGTACTGATCGTT 57.857 45.000 0.00 0.00 39.55 3.85
202 203 2.259618 GATGTTGCACGTACTGATCGT 58.740 47.619 0.00 0.00 42.33 3.73
203 204 1.588404 GGATGTTGCACGTACTGATCG 59.412 52.381 0.00 0.00 0.00 3.69
204 205 2.860735 GAGGATGTTGCACGTACTGATC 59.139 50.000 0.00 0.00 25.66 2.92
205 206 2.497675 AGAGGATGTTGCACGTACTGAT 59.502 45.455 0.00 0.00 25.66 2.90
206 207 1.893137 AGAGGATGTTGCACGTACTGA 59.107 47.619 0.00 0.00 25.66 3.41
207 208 2.370281 AGAGGATGTTGCACGTACTG 57.630 50.000 0.00 0.00 25.66 2.74
208 209 4.159693 TGAATAGAGGATGTTGCACGTACT 59.840 41.667 0.00 0.00 28.94 2.73
209 210 4.430007 TGAATAGAGGATGTTGCACGTAC 58.570 43.478 0.00 0.00 0.00 3.67
210 211 4.729227 TGAATAGAGGATGTTGCACGTA 57.271 40.909 0.00 0.00 0.00 3.57
211 212 3.610040 TGAATAGAGGATGTTGCACGT 57.390 42.857 0.00 0.00 0.00 4.49
212 213 3.873361 ACATGAATAGAGGATGTTGCACG 59.127 43.478 0.00 0.00 0.00 5.34
213 214 5.007430 CAGACATGAATAGAGGATGTTGCAC 59.993 44.000 0.00 0.00 30.39 4.57
214 215 5.121105 CAGACATGAATAGAGGATGTTGCA 58.879 41.667 0.00 0.00 30.39 4.08
215 216 5.121811 ACAGACATGAATAGAGGATGTTGC 58.878 41.667 0.00 0.00 30.39 4.17
216 217 7.046652 AGAACAGACATGAATAGAGGATGTTG 58.953 38.462 0.00 0.00 30.39 3.33
217 218 7.192852 AGAACAGACATGAATAGAGGATGTT 57.807 36.000 0.00 0.00 30.39 2.71
218 219 6.805016 AGAACAGACATGAATAGAGGATGT 57.195 37.500 0.00 0.00 32.95 3.06
220 221 8.748412 GCTATAGAACAGACATGAATAGAGGAT 58.252 37.037 3.21 0.00 0.00 3.24
221 222 7.947332 AGCTATAGAACAGACATGAATAGAGGA 59.053 37.037 3.21 0.00 0.00 3.71
222 223 8.121305 AGCTATAGAACAGACATGAATAGAGG 57.879 38.462 3.21 0.00 0.00 3.69
229 230 9.967346 GTAACAATAGCTATAGAACAGACATGA 57.033 33.333 6.68 0.00 0.00 3.07
230 231 8.906693 CGTAACAATAGCTATAGAACAGACATG 58.093 37.037 6.68 0.00 0.00 3.21
231 232 8.630917 ACGTAACAATAGCTATAGAACAGACAT 58.369 33.333 6.68 0.00 0.00 3.06
232 233 7.913821 CACGTAACAATAGCTATAGAACAGACA 59.086 37.037 6.68 0.00 0.00 3.41
233 234 7.914346 ACACGTAACAATAGCTATAGAACAGAC 59.086 37.037 6.68 0.00 0.00 3.51
234 235 7.993101 ACACGTAACAATAGCTATAGAACAGA 58.007 34.615 6.68 0.00 0.00 3.41
235 236 8.630278 AACACGTAACAATAGCTATAGAACAG 57.370 34.615 6.68 1.00 0.00 3.16
236 237 8.865978 CAAACACGTAACAATAGCTATAGAACA 58.134 33.333 6.68 0.00 0.00 3.18
237 238 7.844653 GCAAACACGTAACAATAGCTATAGAAC 59.155 37.037 6.68 2.88 0.00 3.01
238 239 7.762615 AGCAAACACGTAACAATAGCTATAGAA 59.237 33.333 6.68 0.00 0.00 2.10
239 240 7.222031 CAGCAAACACGTAACAATAGCTATAGA 59.778 37.037 6.68 0.00 0.00 1.98
240 241 7.337718 CAGCAAACACGTAACAATAGCTATAG 58.662 38.462 6.68 0.00 0.00 1.31
241 242 6.237996 GCAGCAAACACGTAACAATAGCTATA 60.238 38.462 6.68 0.00 0.00 1.31
242 243 5.447279 GCAGCAAACACGTAACAATAGCTAT 60.447 40.000 0.00 0.00 0.00 2.97
243 244 4.142988 GCAGCAAACACGTAACAATAGCTA 60.143 41.667 0.00 0.00 0.00 3.32
244 245 3.364964 GCAGCAAACACGTAACAATAGCT 60.365 43.478 0.00 0.00 0.00 3.32
245 246 2.908626 GCAGCAAACACGTAACAATAGC 59.091 45.455 0.00 0.00 0.00 2.97
246 247 4.151070 CAGCAGCAAACACGTAACAATAG 58.849 43.478 0.00 0.00 0.00 1.73
247 248 3.562141 ACAGCAGCAAACACGTAACAATA 59.438 39.130 0.00 0.00 0.00 1.90
248 249 2.357637 ACAGCAGCAAACACGTAACAAT 59.642 40.909 0.00 0.00 0.00 2.71
249 250 1.740585 ACAGCAGCAAACACGTAACAA 59.259 42.857 0.00 0.00 0.00 2.83
250 251 1.374560 ACAGCAGCAAACACGTAACA 58.625 45.000 0.00 0.00 0.00 2.41
251 252 2.468532 AACAGCAGCAAACACGTAAC 57.531 45.000 0.00 0.00 0.00 2.50
252 253 3.608241 GCATAACAGCAGCAAACACGTAA 60.608 43.478 0.00 0.00 0.00 3.18
253 254 2.095969 GCATAACAGCAGCAAACACGTA 60.096 45.455 0.00 0.00 0.00 3.57
254 255 1.334960 GCATAACAGCAGCAAACACGT 60.335 47.619 0.00 0.00 0.00 4.49
255 256 1.330306 GCATAACAGCAGCAAACACG 58.670 50.000 0.00 0.00 0.00 4.49
256 257 2.420628 TGCATAACAGCAGCAAACAC 57.579 45.000 0.00 0.00 40.11 3.32
274 275 6.369005 CAAACTAGAAGAACAGCAAGACATG 58.631 40.000 0.00 0.00 0.00 3.21
275 276 5.049129 GCAAACTAGAAGAACAGCAAGACAT 60.049 40.000 0.00 0.00 0.00 3.06
276 277 4.273480 GCAAACTAGAAGAACAGCAAGACA 59.727 41.667 0.00 0.00 0.00 3.41
277 278 4.513318 AGCAAACTAGAAGAACAGCAAGAC 59.487 41.667 0.00 0.00 0.00 3.01
278 279 4.708177 AGCAAACTAGAAGAACAGCAAGA 58.292 39.130 0.00 0.00 0.00 3.02
291 292 7.199541 AGCATGCAATAATCTAGCAAACTAG 57.800 36.000 21.98 0.00 46.30 2.57
292 293 7.933577 ACTAGCATGCAATAATCTAGCAAACTA 59.066 33.333 21.98 0.00 42.15 2.24
293 294 6.769822 ACTAGCATGCAATAATCTAGCAAACT 59.230 34.615 21.98 0.00 42.15 2.66
294 295 6.963796 ACTAGCATGCAATAATCTAGCAAAC 58.036 36.000 21.98 0.00 42.15 2.93
295 296 8.853077 ATACTAGCATGCAATAATCTAGCAAA 57.147 30.769 21.98 1.19 42.15 3.68
296 297 8.316946 AGATACTAGCATGCAATAATCTAGCAA 58.683 33.333 21.98 3.56 42.15 3.91
297 298 7.845037 AGATACTAGCATGCAATAATCTAGCA 58.155 34.615 21.98 1.80 43.14 3.49
298 299 8.196771 AGAGATACTAGCATGCAATAATCTAGC 58.803 37.037 21.98 10.95 32.23 3.42
301 302 8.814931 AGAAGAGATACTAGCATGCAATAATCT 58.185 33.333 21.98 20.35 0.00 2.40
304 305 9.083422 ACTAGAAGAGATACTAGCATGCAATAA 57.917 33.333 21.98 2.60 39.47 1.40
305 306 8.642935 ACTAGAAGAGATACTAGCATGCAATA 57.357 34.615 21.98 9.23 39.47 1.90
306 307 7.232330 TGACTAGAAGAGATACTAGCATGCAAT 59.768 37.037 21.98 7.51 39.47 3.56
307 308 6.547510 TGACTAGAAGAGATACTAGCATGCAA 59.452 38.462 21.98 2.20 39.47 4.08
308 309 6.064717 TGACTAGAAGAGATACTAGCATGCA 58.935 40.000 21.98 5.01 39.47 3.96
309 310 6.567687 TGACTAGAAGAGATACTAGCATGC 57.432 41.667 10.51 10.51 39.47 4.06
339 340 9.807649 GCAAGTTCATGATTAATTCCAGTAAAT 57.192 29.630 0.00 0.00 0.00 1.40
340 341 8.250332 GGCAAGTTCATGATTAATTCCAGTAAA 58.750 33.333 0.00 0.00 0.00 2.01
341 342 7.615365 AGGCAAGTTCATGATTAATTCCAGTAA 59.385 33.333 0.00 0.00 0.00 2.24
342 343 7.118723 AGGCAAGTTCATGATTAATTCCAGTA 58.881 34.615 0.00 0.00 0.00 2.74
343 344 5.954150 AGGCAAGTTCATGATTAATTCCAGT 59.046 36.000 0.00 0.00 0.00 4.00
344 345 6.461110 AGGCAAGTTCATGATTAATTCCAG 57.539 37.500 0.00 0.00 0.00 3.86
345 346 7.953005 TTAGGCAAGTTCATGATTAATTCCA 57.047 32.000 0.00 0.00 0.00 3.53
350 351 9.639563 TGGAATATTAGGCAAGTTCATGATTAA 57.360 29.630 0.00 0.00 0.00 1.40
351 352 9.639563 TTGGAATATTAGGCAAGTTCATGATTA 57.360 29.630 0.00 0.00 0.00 1.75
352 353 8.537728 TTGGAATATTAGGCAAGTTCATGATT 57.462 30.769 0.00 0.00 0.00 2.57
353 354 8.716674 ATTGGAATATTAGGCAAGTTCATGAT 57.283 30.769 0.00 0.00 0.00 2.45
354 355 9.288576 CTATTGGAATATTAGGCAAGTTCATGA 57.711 33.333 0.00 0.00 0.00 3.07
355 356 9.288576 TCTATTGGAATATTAGGCAAGTTCATG 57.711 33.333 0.00 0.00 0.00 3.07
357 358 9.288576 CATCTATTGGAATATTAGGCAAGTTCA 57.711 33.333 0.00 0.00 0.00 3.18
358 359 8.239998 GCATCTATTGGAATATTAGGCAAGTTC 58.760 37.037 0.00 0.00 0.00 3.01
359 360 7.177392 GGCATCTATTGGAATATTAGGCAAGTT 59.823 37.037 0.00 0.00 0.00 2.66
360 361 6.660949 GGCATCTATTGGAATATTAGGCAAGT 59.339 38.462 0.00 0.00 0.00 3.16
361 362 6.660521 TGGCATCTATTGGAATATTAGGCAAG 59.339 38.462 0.00 0.00 0.00 4.01
362 363 6.551085 TGGCATCTATTGGAATATTAGGCAA 58.449 36.000 0.00 0.00 0.00 4.52
363 364 6.138391 TGGCATCTATTGGAATATTAGGCA 57.862 37.500 0.00 0.00 0.00 4.75
364 365 7.486647 CAATGGCATCTATTGGAATATTAGGC 58.513 38.462 0.00 0.00 33.08 3.93
375 376 3.228453 AGCTTCCCAATGGCATCTATTG 58.772 45.455 0.00 0.00 35.75 1.90
376 377 3.607490 AGCTTCCCAATGGCATCTATT 57.393 42.857 0.00 0.00 0.00 1.73
377 378 3.228453 CAAGCTTCCCAATGGCATCTAT 58.772 45.455 0.00 0.00 0.00 1.98
378 379 2.658285 CAAGCTTCCCAATGGCATCTA 58.342 47.619 0.00 0.00 0.00 1.98
379 380 1.481871 CAAGCTTCCCAATGGCATCT 58.518 50.000 0.00 0.00 0.00 2.90
380 381 0.462789 CCAAGCTTCCCAATGGCATC 59.537 55.000 0.00 0.00 0.00 3.91
381 382 0.252375 ACCAAGCTTCCCAATGGCAT 60.252 50.000 0.00 0.00 36.37 4.40
382 383 1.155859 ACCAAGCTTCCCAATGGCA 59.844 52.632 0.00 0.00 36.37 4.92
720 721 1.834263 CAGCTACCTTGCTACTTCCCT 59.166 52.381 0.00 0.00 41.98 4.20
727 728 0.250234 CCACTGCAGCTACCTTGCTA 59.750 55.000 15.27 0.00 41.98 3.49
755 756 4.864704 TTTCCTTTTCCTTTTCCATCCG 57.135 40.909 0.00 0.00 0.00 4.18
782 783 2.598467 TGGAAAACCCAGCCGTGT 59.402 55.556 0.00 0.00 40.82 4.49
827 829 2.354773 GTCGCTCCGCCTATTCCG 60.355 66.667 0.00 0.00 0.00 4.30
902 914 3.025287 TCTTTTTCTTTCGGCATTGGC 57.975 42.857 0.00 0.00 40.13 4.52
903 915 5.752955 TCTTTTCTTTTTCTTTCGGCATTGG 59.247 36.000 0.00 0.00 0.00 3.16
904 916 6.560251 CGTCTTTTCTTTTTCTTTCGGCATTG 60.560 38.462 0.00 0.00 0.00 2.82
905 917 5.458779 CGTCTTTTCTTTTTCTTTCGGCATT 59.541 36.000 0.00 0.00 0.00 3.56
906 918 4.976116 CGTCTTTTCTTTTTCTTTCGGCAT 59.024 37.500 0.00 0.00 0.00 4.40
907 919 4.347813 CGTCTTTTCTTTTTCTTTCGGCA 58.652 39.130 0.00 0.00 0.00 5.69
1259 1366 2.187946 CGGCAGATGGAGTCCCAC 59.812 66.667 6.74 0.29 46.98 4.61
1366 1473 0.599728 GATGAGCATGTCCTCCTCGC 60.600 60.000 0.00 0.00 0.00 5.03
1450 1557 1.144969 GTTCTTGATGGCGTTGTCGA 58.855 50.000 0.00 0.00 39.71 4.20
1989 3899 3.063997 CGATTACAGAAAATCCAGCGCTT 59.936 43.478 7.50 0.00 33.15 4.68
2082 4605 6.541111 ACTACAAGACGTTCAGAATTTTCC 57.459 37.500 0.00 0.00 0.00 3.13
2104 4627 5.151389 GTTGATTACAACGGTCATGGAAAC 58.849 41.667 0.00 0.00 45.06 2.78
2149 5025 9.111613 GTAGATGCTCTGAAGTAGTCTAGTAAA 57.888 37.037 0.00 0.00 0.00 2.01
2182 5396 5.520748 ACAGAGGGTCAAATTAGGACATT 57.479 39.130 11.09 0.75 37.00 2.71
2295 5511 0.628668 ATCCCCTTGCCCCTCATTCT 60.629 55.000 0.00 0.00 0.00 2.40
2298 5514 0.925720 TCAATCCCCTTGCCCCTCAT 60.926 55.000 0.00 0.00 34.66 2.90
2306 5522 3.838244 TTCTCCGTATCAATCCCCTTG 57.162 47.619 0.00 0.00 36.09 3.61
2310 5526 5.823045 ACAAATCTTTCTCCGTATCAATCCC 59.177 40.000 0.00 0.00 0.00 3.85
2348 5564 8.009622 ACCAAACATATGCATATCAAATCACA 57.990 30.769 16.46 0.00 0.00 3.58
2359 5576 9.480053 GATTGCTTATTTACCAAACATATGCAT 57.520 29.630 3.79 3.79 34.99 3.96
2503 5720 2.943036 TGGGTTTCGGATATTAGGGC 57.057 50.000 0.00 0.00 0.00 5.19
2613 5846 9.289782 ACTTGCTATCTTTTATCTTTTGTGAGT 57.710 29.630 0.00 0.00 0.00 3.41
2626 5859 7.284489 TGTGTCCTGTTAAACTTGCTATCTTTT 59.716 33.333 0.00 0.00 0.00 2.27
2627 5860 6.770785 TGTGTCCTGTTAAACTTGCTATCTTT 59.229 34.615 0.00 0.00 0.00 2.52
2628 5861 6.296026 TGTGTCCTGTTAAACTTGCTATCTT 58.704 36.000 0.00 0.00 0.00 2.40
2629 5862 5.865085 TGTGTCCTGTTAAACTTGCTATCT 58.135 37.500 0.00 0.00 0.00 1.98
2630 5863 6.017440 TGTTGTGTCCTGTTAAACTTGCTATC 60.017 38.462 0.00 0.00 0.00 2.08
2631 5864 5.825679 TGTTGTGTCCTGTTAAACTTGCTAT 59.174 36.000 0.00 0.00 0.00 2.97
2641 5874 6.488344 TGAATTTGCTATGTTGTGTCCTGTTA 59.512 34.615 0.00 0.00 0.00 2.41
2699 5932 9.535801 ACTCCCCCTCTCACTATCTTATATATA 57.464 37.037 0.00 0.00 0.00 0.86
2700 5933 8.427605 ACTCCCCCTCTCACTATCTTATATAT 57.572 38.462 0.00 0.00 0.00 0.86
2701 5934 7.848821 ACTCCCCCTCTCACTATCTTATATA 57.151 40.000 0.00 0.00 0.00 0.86
2713 6025 2.610859 GCCCAACTCCCCCTCTCA 60.611 66.667 0.00 0.00 0.00 3.27
2723 6035 0.178990 GGAAGTGGTGAAGCCCAACT 60.179 55.000 0.00 0.00 35.92 3.16
2725 6037 0.110486 GAGGAAGTGGTGAAGCCCAA 59.890 55.000 0.00 0.00 35.92 4.12
2726 6038 1.761174 GAGGAAGTGGTGAAGCCCA 59.239 57.895 0.00 0.00 36.04 5.36
2793 6105 1.079405 CAACCACCGACGCCTACAT 60.079 57.895 0.00 0.00 0.00 2.29
2795 6107 2.433664 CCAACCACCGACGCCTAC 60.434 66.667 0.00 0.00 0.00 3.18
2848 6160 4.122776 CTCATCTTTATCCACCTCCAACG 58.877 47.826 0.00 0.00 0.00 4.10
2857 6169 4.202441 GCTCCTTTGCTCATCTTTATCCA 58.798 43.478 0.00 0.00 0.00 3.41
2873 6185 2.530151 TGTCTGGCCAGGCTCCTT 60.530 61.111 35.84 0.00 33.37 3.36
2930 6242 4.445545 GAAAGCGAACGCCTGCCG 62.446 66.667 15.44 0.00 43.17 5.69
2931 6243 4.445545 CGAAAGCGAACGCCTGCC 62.446 66.667 15.44 2.58 43.17 4.85
2943 6255 1.433534 GTCCTTCACCTCAGCGAAAG 58.566 55.000 0.00 0.00 0.00 2.62
2944 6256 0.034896 GGTCCTTCACCTCAGCGAAA 59.965 55.000 0.00 0.00 42.84 3.46
2945 6257 1.118965 TGGTCCTTCACCTCAGCGAA 61.119 55.000 0.00 0.00 46.98 4.70
2946 6258 1.533033 TGGTCCTTCACCTCAGCGA 60.533 57.895 0.00 0.00 46.98 4.93
2947 6259 1.079543 CTGGTCCTTCACCTCAGCG 60.080 63.158 0.00 0.00 46.98 5.18
2948 6260 1.376553 GCTGGTCCTTCACCTCAGC 60.377 63.158 0.00 0.00 46.98 4.26
2949 6261 0.036577 CTGCTGGTCCTTCACCTCAG 60.037 60.000 0.00 0.00 46.98 3.35
2950 6262 0.471780 TCTGCTGGTCCTTCACCTCA 60.472 55.000 0.00 0.00 46.98 3.86
2951 6263 0.908198 ATCTGCTGGTCCTTCACCTC 59.092 55.000 0.00 0.00 46.98 3.85
2952 6264 0.617413 CATCTGCTGGTCCTTCACCT 59.383 55.000 0.00 0.00 46.98 4.00
2954 6266 2.286872 CATCATCTGCTGGTCCTTCAC 58.713 52.381 0.00 0.00 0.00 3.18
2955 6267 1.911357 ACATCATCTGCTGGTCCTTCA 59.089 47.619 0.00 0.00 0.00 3.02
2956 6268 2.093288 TGACATCATCTGCTGGTCCTTC 60.093 50.000 0.00 0.00 0.00 3.46
2957 6269 1.911357 TGACATCATCTGCTGGTCCTT 59.089 47.619 0.00 0.00 0.00 3.36
2958 6270 1.209019 GTGACATCATCTGCTGGTCCT 59.791 52.381 0.00 0.00 0.00 3.85
2959 6271 1.661341 GTGACATCATCTGCTGGTCC 58.339 55.000 0.00 0.00 0.00 4.46
2960 6272 1.284657 CGTGACATCATCTGCTGGTC 58.715 55.000 0.00 0.00 0.00 4.02
2961 6273 0.107993 CCGTGACATCATCTGCTGGT 60.108 55.000 0.00 0.00 0.00 4.00
2962 6274 0.176449 TCCGTGACATCATCTGCTGG 59.824 55.000 0.00 0.00 0.00 4.85
2963 6275 1.568606 CTCCGTGACATCATCTGCTG 58.431 55.000 0.00 0.00 0.00 4.41
2964 6276 0.463204 CCTCCGTGACATCATCTGCT 59.537 55.000 0.00 0.00 0.00 4.24
2965 6277 0.461548 TCCTCCGTGACATCATCTGC 59.538 55.000 0.00 0.00 0.00 4.26
2966 6278 1.068281 CCTCCTCCGTGACATCATCTG 59.932 57.143 0.00 0.00 0.00 2.90
2967 6279 1.342474 ACCTCCTCCGTGACATCATCT 60.342 52.381 0.00 0.00 0.00 2.90
2968 6280 1.067821 GACCTCCTCCGTGACATCATC 59.932 57.143 0.00 0.00 0.00 2.92
2969 6281 1.115467 GACCTCCTCCGTGACATCAT 58.885 55.000 0.00 0.00 0.00 2.45
2970 6282 1.313091 CGACCTCCTCCGTGACATCA 61.313 60.000 0.00 0.00 0.00 3.07
2971 6283 1.313812 ACGACCTCCTCCGTGACATC 61.314 60.000 0.00 0.00 37.64 3.06
2972 6284 1.304217 ACGACCTCCTCCGTGACAT 60.304 57.895 0.00 0.00 37.64 3.06
2973 6285 1.970114 GACGACCTCCTCCGTGACA 60.970 63.158 0.00 0.00 39.30 3.58
2974 6286 1.242665 AAGACGACCTCCTCCGTGAC 61.243 60.000 0.00 0.00 39.30 3.67
2975 6287 0.959372 GAAGACGACCTCCTCCGTGA 60.959 60.000 0.00 0.00 39.30 4.35
2976 6288 1.241990 TGAAGACGACCTCCTCCGTG 61.242 60.000 0.00 0.00 39.30 4.94
2977 6289 0.961358 CTGAAGACGACCTCCTCCGT 60.961 60.000 0.00 0.00 42.17 4.69
2978 6290 0.677098 TCTGAAGACGACCTCCTCCG 60.677 60.000 0.00 0.00 0.00 4.63
2979 6291 1.099689 CTCTGAAGACGACCTCCTCC 58.900 60.000 0.00 0.00 0.00 4.30
2980 6292 1.741145 GACTCTGAAGACGACCTCCTC 59.259 57.143 0.00 0.00 0.00 3.71
2981 6293 1.828979 GACTCTGAAGACGACCTCCT 58.171 55.000 0.00 0.00 0.00 3.69
2982 6294 0.448593 CGACTCTGAAGACGACCTCC 59.551 60.000 0.00 0.00 42.15 4.30
2983 6295 0.448593 CCGACTCTGAAGACGACCTC 59.551 60.000 0.00 0.00 42.15 3.85
2984 6296 1.587933 GCCGACTCTGAAGACGACCT 61.588 60.000 0.00 0.00 42.15 3.85
2985 6297 1.153997 GCCGACTCTGAAGACGACC 60.154 63.158 0.00 0.00 42.15 4.79
2986 6298 0.039437 TTGCCGACTCTGAAGACGAC 60.039 55.000 0.00 0.00 42.15 4.34
2987 6299 0.241213 CTTGCCGACTCTGAAGACGA 59.759 55.000 0.00 0.00 42.15 4.20
2988 6300 1.347817 GCTTGCCGACTCTGAAGACG 61.348 60.000 0.00 0.00 39.81 4.18
2989 6301 1.347817 CGCTTGCCGACTCTGAAGAC 61.348 60.000 0.00 0.00 40.02 3.01
2990 6302 1.080501 CGCTTGCCGACTCTGAAGA 60.081 57.895 0.00 0.00 40.02 2.87
2991 6303 2.097038 CCGCTTGCCGACTCTGAAG 61.097 63.158 0.00 0.00 40.02 3.02
2992 6304 2.048222 CCGCTTGCCGACTCTGAA 60.048 61.111 0.00 0.00 40.02 3.02
2993 6305 2.492449 CTTCCGCTTGCCGACTCTGA 62.492 60.000 0.00 0.00 40.02 3.27
2994 6306 2.048222 TTCCGCTTGCCGACTCTG 60.048 61.111 0.00 0.00 40.02 3.35
2995 6307 2.262915 CTTCCGCTTGCCGACTCT 59.737 61.111 0.00 0.00 40.02 3.24
2996 6308 3.491652 GCTTCCGCTTGCCGACTC 61.492 66.667 0.00 0.00 40.02 3.36
3014 6326 3.917760 CAGATCCGGGACCGAGCC 61.918 72.222 13.13 0.40 42.83 4.70


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.