Multiple sequence alignment - TraesCS4D01G232000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G232000 chr4D 100.000 3428 0 0 1 3428 392536352 392539779 0.000000e+00 6331.0
1 TraesCS4D01G232000 chr4D 100.000 2872 0 0 3754 6625 392540105 392542976 0.000000e+00 5304.0
2 TraesCS4D01G232000 chr4B 93.341 2643 79 36 47 2632 482136282 482138884 0.000000e+00 3816.0
3 TraesCS4D01G232000 chr4B 95.692 2089 62 12 3754 5828 482139499 482141573 0.000000e+00 3334.0
4 TraesCS4D01G232000 chr4B 93.603 766 49 0 5860 6625 482141570 482142335 0.000000e+00 1144.0
5 TraesCS4D01G232000 chr4B 83.652 575 83 6 6059 6625 13369704 13369133 1.260000e-146 531.0
6 TraesCS4D01G232000 chr4B 85.991 464 57 4 6170 6625 616753424 616753887 2.150000e-134 490.0
7 TraesCS4D01G232000 chr4B 84.314 102 7 6 2717 2812 482139046 482139144 2.540000e-14 91.6
8 TraesCS4D01G232000 chr4B 94.231 52 3 0 2662 2713 482138892 482138943 5.510000e-11 80.5
9 TraesCS4D01G232000 chr4B 81.373 102 12 5 61 158 35633735 35633833 7.120000e-10 76.8
10 TraesCS4D01G232000 chr4A 95.032 1389 38 12 517 1885 74008854 74010231 0.000000e+00 2154.0
11 TraesCS4D01G232000 chr4A 93.274 1011 49 11 3754 4757 74011466 74012464 0.000000e+00 1472.0
12 TraesCS4D01G232000 chr4A 91.778 1046 51 22 4787 5824 74012461 74013479 0.000000e+00 1423.0
13 TraesCS4D01G232000 chr4A 90.745 886 43 25 1943 2814 74010263 74011123 0.000000e+00 1146.0
14 TraesCS4D01G232000 chr4A 82.550 298 33 9 63 346 74008069 74008361 1.850000e-60 244.0
15 TraesCS4D01G232000 chr4A 87.081 209 15 5 333 531 74008626 74008832 6.680000e-55 226.0
16 TraesCS4D01G232000 chr4A 85.484 62 5 2 63 121 578532375 578532315 1.990000e-05 62.1
17 TraesCS4D01G232000 chr6D 87.146 459 51 3 6170 6620 398731751 398731293 1.270000e-141 514.0
18 TraesCS4D01G232000 chr6D 98.758 161 2 0 3268 3428 30213661 30213501 3.020000e-73 287.0
19 TraesCS4D01G232000 chr6D 98.758 161 2 0 3268 3428 410738649 410738809 3.020000e-73 287.0
20 TraesCS4D01G232000 chr6D 83.453 139 23 0 1404 1542 332499023 332499161 5.390000e-26 130.0
21 TraesCS4D01G232000 chr6D 96.296 54 1 1 1 54 458008046 458008098 3.290000e-13 87.9
22 TraesCS4D01G232000 chr1A 81.864 601 97 7 6036 6625 124792926 124793525 4.610000e-136 496.0
23 TraesCS4D01G232000 chr5B 84.211 513 71 5 6122 6625 554645499 554646010 2.150000e-134 490.0
24 TraesCS4D01G232000 chr5B 89.764 254 24 2 1612 1865 409873321 409873572 2.300000e-84 324.0
25 TraesCS4D01G232000 chr5B 90.968 155 14 0 1404 1558 409873165 409873319 6.730000e-50 209.0
26 TraesCS4D01G232000 chr5B 100.000 28 0 0 2959 2986 567777590 567777563 1.200000e-02 52.8
27 TraesCS4D01G232000 chr7B 85.093 483 63 4 6147 6620 369093524 369094006 9.990000e-133 484.0
28 TraesCS4D01G232000 chr3A 81.549 607 87 17 6034 6625 682480264 682480860 1.670000e-130 477.0
29 TraesCS4D01G232000 chr3A 76.966 534 87 25 6036 6553 44221300 44220787 8.470000e-69 272.0
30 TraesCS4D01G232000 chr3A 89.286 84 8 1 2914 2997 594589171 594589253 3.270000e-18 104.0
31 TraesCS4D01G232000 chr2D 80.200 601 108 8 6034 6624 481059828 481060427 2.190000e-119 440.0
32 TraesCS4D01G232000 chr2D 97.110 173 2 3 3259 3428 539703214 539703386 8.410000e-74 289.0
33 TraesCS4D01G232000 chr2D 98.758 161 2 0 3268 3428 628848098 628847938 3.020000e-73 287.0
34 TraesCS4D01G232000 chr2D 93.443 61 1 3 1 59 642236529 642236588 3.290000e-13 87.9
35 TraesCS4D01G232000 chr2D 77.419 124 20 6 2213 2332 52018134 52018253 4.290000e-07 67.6
36 TraesCS4D01G232000 chr3D 78.176 614 94 21 6034 6625 308741675 308741080 8.170000e-94 355.0
37 TraesCS4D01G232000 chr3D 98.235 170 0 3 3260 3428 236112279 236112112 1.810000e-75 294.0
38 TraesCS4D01G232000 chr3D 98.758 161 1 1 3268 3428 18632432 18632591 1.090000e-72 285.0
39 TraesCS4D01G232000 chr3D 77.688 372 66 11 6033 6391 114338723 114339090 1.870000e-50 211.0
40 TraesCS4D01G232000 chr5A 90.234 256 23 2 1612 1867 449255461 449255714 3.830000e-87 333.0
41 TraesCS4D01G232000 chr5A 90.323 155 15 0 1404 1558 449255305 449255459 3.130000e-48 204.0
42 TraesCS4D01G232000 chr5A 94.737 57 2 1 1 56 506670887 506670943 3.290000e-13 87.9
43 TraesCS4D01G232000 chr5A 94.737 57 2 1 1 56 506676685 506676741 3.290000e-13 87.9
44 TraesCS4D01G232000 chr5D 89.764 254 24 2 1612 1865 349377398 349377649 2.300000e-84 324.0
45 TraesCS4D01G232000 chr5D 90.968 155 14 0 1404 1558 349377242 349377396 6.730000e-50 209.0
46 TraesCS4D01G232000 chr5D 83.571 140 21 2 1404 1542 442331800 442331938 5.390000e-26 130.0
47 TraesCS4D01G232000 chr5D 100.000 49 0 0 1 49 40261069 40261021 2.540000e-14 91.6
48 TraesCS4D01G232000 chr1D 99.379 161 1 0 3268 3428 318279025 318278865 6.500000e-75 292.0
49 TraesCS4D01G232000 chr1D 98.758 161 1 1 3268 3428 158245468 158245627 1.090000e-72 285.0
50 TraesCS4D01G232000 chr1D 96.296 54 2 0 1 54 352821949 352821896 9.150000e-14 89.8
51 TraesCS4D01G232000 chr1D 96.296 54 0 2 1 54 408424973 408424922 3.290000e-13 87.9
52 TraesCS4D01G232000 chr7D 98.204 167 0 3 3262 3428 229867685 229867848 8.410000e-74 289.0
53 TraesCS4D01G232000 chr7D 93.548 62 2 2 1 61 572812073 572812013 2.540000e-14 91.6
54 TraesCS4D01G232000 chr6B 82.759 145 25 0 1404 1548 487835471 487835327 5.390000e-26 130.0
55 TraesCS4D01G232000 chr6A 82.734 139 24 0 1404 1542 471800554 471800692 2.510000e-24 124.0
56 TraesCS4D01G232000 chr2B 93.220 59 4 0 3 61 189139421 189139479 3.290000e-13 87.9
57 TraesCS4D01G232000 chr2A 83.077 65 10 1 2269 2332 53283798 53283862 2.580000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G232000 chr4D 392536352 392542976 6624 False 5817.500000 6331 100.000000 1 6625 2 chr4D.!!$F1 6624
1 TraesCS4D01G232000 chr4B 482136282 482142335 6053 False 1693.220000 3816 92.236200 47 6625 5 chr4B.!!$F3 6578
2 TraesCS4D01G232000 chr4B 13369133 13369704 571 True 531.000000 531 83.652000 6059 6625 1 chr4B.!!$R1 566
3 TraesCS4D01G232000 chr4A 74008069 74013479 5410 False 1110.833333 2154 90.076667 63 5824 6 chr4A.!!$F1 5761
4 TraesCS4D01G232000 chr1A 124792926 124793525 599 False 496.000000 496 81.864000 6036 6625 1 chr1A.!!$F1 589
5 TraesCS4D01G232000 chr5B 554645499 554646010 511 False 490.000000 490 84.211000 6122 6625 1 chr5B.!!$F1 503
6 TraesCS4D01G232000 chr3A 682480264 682480860 596 False 477.000000 477 81.549000 6034 6625 1 chr3A.!!$F2 591
7 TraesCS4D01G232000 chr3A 44220787 44221300 513 True 272.000000 272 76.966000 6036 6553 1 chr3A.!!$R1 517
8 TraesCS4D01G232000 chr2D 481059828 481060427 599 False 440.000000 440 80.200000 6034 6624 1 chr2D.!!$F2 590
9 TraesCS4D01G232000 chr3D 308741080 308741675 595 True 355.000000 355 78.176000 6034 6625 1 chr3D.!!$R2 591

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
36 37 0.033503 CCGGGACAATAGGCCCTTTT 60.034 55.000 4.64 0.00 42.40 2.27 F
242 257 0.249120 TCAGCCACACCATCCTAACG 59.751 55.000 0.00 0.00 0.00 3.18 F
353 368 2.227703 AGGGTTGAGAGAGGGAGGATA 58.772 52.381 0.00 0.00 0.00 2.59 F
1370 1728 0.107897 TTACTGCGCCGTGGATTCAT 60.108 50.000 15.24 0.00 0.00 2.57 F
2731 3259 0.040942 TGCATGCATGGTTAACCCCT 59.959 50.000 27.34 6.59 34.29 4.79 F
3066 3747 0.033366 AAATTTGCCAACCTCGCACC 59.967 50.000 0.00 0.00 35.56 5.01 F
3781 4465 0.248539 GACTCCGGATAGCGTGTGAC 60.249 60.000 3.57 0.00 0.00 3.67 F
5546 6248 0.229753 GTATACGTGCACGCATGAGC 59.770 55.000 37.35 20.27 44.43 4.26 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1327 1685 1.153309 TGCATGCTGACCGATCCAG 60.153 57.895 20.33 0.00 34.88 3.86 R
1354 1712 2.874694 CGATGAATCCACGGCGCAG 61.875 63.158 10.83 8.25 0.00 5.18 R
2296 2712 1.457346 CATCAGTTTCAGGTCCCAGC 58.543 55.000 0.00 0.00 0.00 4.85 R
3047 3728 0.033366 GGTGCGAGGTTGGCAAATTT 59.967 50.000 0.00 0.00 42.92 1.82 R
3760 4444 0.172578 CACACGCTATCCGGAGTCAA 59.827 55.000 11.34 0.00 42.52 3.18 R
4136 4823 0.604578 GCCCGGCCGTTACATCTATA 59.395 55.000 26.12 0.00 0.00 1.31 R
5599 6304 1.009675 ACTGAACAGCAAAAGCGCG 60.010 52.632 0.00 0.00 36.85 6.86 R
6461 7204 2.025981 TGTCAAGGATGAAGGTGATGGG 60.026 50.000 0.00 0.00 37.30 4.00 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 0.601057 CAAAAGGCCCTTACCAACCG 59.399 55.000 0.00 0.00 0.00 4.44
20 21 0.541063 AAAAGGCCCTTACCAACCGG 60.541 55.000 0.00 0.00 38.77 5.28
21 22 2.435120 AAAGGCCCTTACCAACCGGG 62.435 60.000 6.32 0.00 44.81 5.73
22 23 3.332385 GGCCCTTACCAACCGGGA 61.332 66.667 6.32 0.00 40.55 5.14
23 24 2.045634 GCCCTTACCAACCGGGAC 60.046 66.667 6.32 0.00 40.55 4.46
24 25 2.897762 GCCCTTACCAACCGGGACA 61.898 63.158 6.32 0.00 40.55 4.02
25 26 1.762471 CCCTTACCAACCGGGACAA 59.238 57.895 6.32 0.00 40.55 3.18
26 27 0.330267 CCCTTACCAACCGGGACAAT 59.670 55.000 6.32 0.00 40.55 2.71
27 28 1.560611 CCCTTACCAACCGGGACAATA 59.439 52.381 6.32 0.00 40.55 1.90
28 29 2.420967 CCCTTACCAACCGGGACAATAG 60.421 54.545 6.32 0.00 40.55 1.73
29 30 2.420967 CCTTACCAACCGGGACAATAGG 60.421 54.545 6.32 1.59 41.15 2.57
30 31 0.542805 TACCAACCGGGACAATAGGC 59.457 55.000 6.32 0.00 41.15 3.93
31 32 1.453197 CCAACCGGGACAATAGGCC 60.453 63.158 6.32 0.00 40.01 5.19
32 33 1.453197 CAACCGGGACAATAGGCCC 60.453 63.158 6.32 0.00 41.11 5.80
33 34 1.618447 AACCGGGACAATAGGCCCT 60.618 57.895 6.32 0.00 42.40 5.19
34 35 1.212250 AACCGGGACAATAGGCCCTT 61.212 55.000 6.32 0.00 42.40 3.95
35 36 1.212250 ACCGGGACAATAGGCCCTTT 61.212 55.000 6.32 0.00 42.40 3.11
36 37 0.033503 CCGGGACAATAGGCCCTTTT 60.034 55.000 4.64 0.00 42.40 2.27
37 38 1.618616 CCGGGACAATAGGCCCTTTTT 60.619 52.381 4.64 0.00 42.40 1.94
38 39 1.749063 CGGGACAATAGGCCCTTTTTC 59.251 52.381 4.64 0.00 42.40 2.29
39 40 2.620627 CGGGACAATAGGCCCTTTTTCT 60.621 50.000 4.64 0.00 42.40 2.52
40 41 3.371166 CGGGACAATAGGCCCTTTTTCTA 60.371 47.826 4.64 0.00 42.40 2.10
41 42 3.952323 GGGACAATAGGCCCTTTTTCTAC 59.048 47.826 0.00 0.00 41.31 2.59
42 43 4.325109 GGGACAATAGGCCCTTTTTCTACT 60.325 45.833 0.00 0.00 41.31 2.57
43 44 5.104235 GGGACAATAGGCCCTTTTTCTACTA 60.104 44.000 0.00 0.00 41.31 1.82
44 45 6.056236 GGACAATAGGCCCTTTTTCTACTAG 58.944 44.000 0.00 0.00 0.00 2.57
45 46 6.352823 GGACAATAGGCCCTTTTTCTACTAGT 60.353 42.308 0.00 0.00 0.00 2.57
49 50 2.007608 GCCCTTTTTCTACTAGTGCGG 58.992 52.381 5.39 0.00 0.00 5.69
56 57 1.964552 TCTACTAGTGCGGAGTAGGC 58.035 55.000 21.12 0.00 44.39 3.93
74 75 3.234630 CTGGCGGTTTCACGGGAGA 62.235 63.158 0.00 0.00 0.00 3.71
123 124 6.266131 ACAATGCCCTAATCTATTTCTGGA 57.734 37.500 0.00 0.00 0.00 3.86
133 134 8.159447 CCTAATCTATTTCTGGACATTGGATCA 58.841 37.037 0.00 0.00 0.00 2.92
149 150 3.963374 TGGATCAAGATCTAGTGGTCCTG 59.037 47.826 21.97 4.68 44.19 3.86
151 152 3.757947 TCAAGATCTAGTGGTCCTGGA 57.242 47.619 0.00 0.00 34.87 3.86
158 159 4.669866 TCTAGTGGTCCTGGAAGAAGTA 57.330 45.455 0.00 0.00 34.07 2.24
162 163 2.370849 GTGGTCCTGGAAGAAGTAACCA 59.629 50.000 0.00 0.00 34.07 3.67
164 165 3.181448 TGGTCCTGGAAGAAGTAACCAAC 60.181 47.826 0.00 0.00 34.07 3.77
183 195 4.023707 CCAACTTTTCAAGTGCCTGAGTAG 60.024 45.833 0.00 0.00 41.91 2.57
242 257 0.249120 TCAGCCACACCATCCTAACG 59.751 55.000 0.00 0.00 0.00 3.18
276 291 6.942005 TGGTGACTTTGAATATGACAGTCAAT 59.058 34.615 7.50 0.02 40.65 2.57
285 300 8.352752 TGAATATGACAGTCAATAAGCGTTAG 57.647 34.615 7.50 0.00 0.00 2.34
353 368 2.227703 AGGGTTGAGAGAGGGAGGATA 58.772 52.381 0.00 0.00 0.00 2.59
354 369 2.592512 AGGGTTGAGAGAGGGAGGATAA 59.407 50.000 0.00 0.00 0.00 1.75
408 712 6.064717 AGAATAATTGTGCATTAGAGGGTCC 58.935 40.000 0.00 0.00 30.48 4.46
415 719 4.202567 TGTGCATTAGAGGGTCCTTTTTCT 60.203 41.667 0.00 0.00 0.00 2.52
417 721 3.948473 GCATTAGAGGGTCCTTTTTCTCC 59.052 47.826 0.00 0.00 0.00 3.71
860 1201 4.825679 CACCCCCTCCCTCCTCCC 62.826 77.778 0.00 0.00 0.00 4.30
863 1204 4.179599 CCCCTCCCTCCTCCCCTC 62.180 77.778 0.00 0.00 0.00 4.30
864 1205 4.179599 CCCTCCCTCCTCCCCTCC 62.180 77.778 0.00 0.00 0.00 4.30
865 1206 4.179599 CCTCCCTCCTCCCCTCCC 62.180 77.778 0.00 0.00 0.00 4.30
866 1207 3.039526 CTCCCTCCTCCCCTCCCT 61.040 72.222 0.00 0.00 0.00 4.20
1192 1538 4.075793 CGTCCTCCCCCTCCTCCA 62.076 72.222 0.00 0.00 0.00 3.86
1309 1662 2.613691 CAGGTACGTGGACCATAACAC 58.386 52.381 10.09 0.00 42.47 3.32
1327 1685 7.010830 CCATAACACATGTGGATCGATCATATC 59.989 40.741 28.64 9.83 42.69 1.63
1354 1712 1.200020 GGTCAGCATGCACTTGGTTAC 59.800 52.381 21.98 3.99 34.76 2.50
1370 1728 0.107897 TTACTGCGCCGTGGATTCAT 60.108 50.000 15.24 0.00 0.00 2.57
1371 1729 0.529773 TACTGCGCCGTGGATTCATC 60.530 55.000 15.24 0.00 0.00 2.92
1454 1850 2.601666 AGGACGCTGCTGGAGTCA 60.602 61.111 13.49 0.00 44.69 3.41
2142 2549 8.166422 AGTTCAGAATTTTAACGAGTTTCCAT 57.834 30.769 0.00 0.00 0.00 3.41
2282 2697 9.702494 TTTTAGTAGCTACTAAGTGGAGTTTTC 57.298 33.333 33.73 3.09 46.08 2.29
2572 3000 6.655003 TCAAAGAAGCACCTACCTTCTAATTG 59.345 38.462 4.30 6.65 46.07 2.32
2578 3006 6.407202 AGCACCTACCTTCTAATTGTGTTAG 58.593 40.000 0.00 0.00 0.00 2.34
2601 3029 0.179086 TCGCTCAACACTGTTGCTGA 60.179 50.000 15.94 10.61 0.00 4.26
2615 3043 2.401766 GCTGAATGGGTGTGCGAGG 61.402 63.158 0.00 0.00 0.00 4.63
2616 3044 2.359850 TGAATGGGTGTGCGAGGC 60.360 61.111 0.00 0.00 0.00 4.70
2617 3045 3.499737 GAATGGGTGTGCGAGGCG 61.500 66.667 0.00 0.00 0.00 5.52
2632 3060 1.004927 GAGGCGATGCAAACGACATAC 60.005 52.381 21.12 10.49 45.72 2.39
2644 3073 9.982651 ATGCAAACGACATACTAGAATATTACT 57.017 29.630 0.00 0.00 0.00 2.24
2695 3124 4.673580 GCAGTCACAAGGTTATTCATGCAG 60.674 45.833 0.00 0.00 0.00 4.41
2718 3210 1.972872 ATGGGTTACTAGCTGCATGC 58.027 50.000 11.82 11.82 43.29 4.06
2719 3211 0.617935 TGGGTTACTAGCTGCATGCA 59.382 50.000 21.29 21.29 45.94 3.96
2721 3213 1.605710 GGGTTACTAGCTGCATGCATG 59.394 52.381 22.97 22.70 45.94 4.06
2722 3214 1.605710 GGTTACTAGCTGCATGCATGG 59.394 52.381 27.34 12.12 45.94 3.66
2731 3259 0.040942 TGCATGCATGGTTAACCCCT 59.959 50.000 27.34 6.59 34.29 4.79
2732 3260 0.746659 GCATGCATGGTTAACCCCTC 59.253 55.000 27.34 10.63 34.29 4.30
2781 3312 3.562639 CATGCATGCATGTACTGGC 57.437 52.632 40.30 12.66 46.20 4.85
2905 3586 8.934023 AAGGAAAAATAATGGACTCAACTACA 57.066 30.769 0.00 0.00 0.00 2.74
2906 3587 8.934023 AGGAAAAATAATGGACTCAACTACAA 57.066 30.769 0.00 0.00 0.00 2.41
2907 3588 9.362151 AGGAAAAATAATGGACTCAACTACAAA 57.638 29.630 0.00 0.00 0.00 2.83
2912 3593 9.520515 AAATAATGGACTCAACTACAAATCTGT 57.479 29.630 0.00 0.00 39.75 3.41
2913 3594 8.723942 ATAATGGACTCAACTACAAATCTGTC 57.276 34.615 0.00 0.00 36.96 3.51
2914 3595 4.556233 TGGACTCAACTACAAATCTGTCG 58.444 43.478 0.00 0.00 36.96 4.35
2915 3596 4.038763 TGGACTCAACTACAAATCTGTCGT 59.961 41.667 0.00 0.00 36.96 4.34
2916 3597 4.989168 GGACTCAACTACAAATCTGTCGTT 59.011 41.667 0.00 0.00 40.92 3.85
2917 3598 6.154445 GGACTCAACTACAAATCTGTCGTTA 58.846 40.000 0.00 0.00 38.90 3.18
2918 3599 6.308282 GGACTCAACTACAAATCTGTCGTTAG 59.692 42.308 0.00 0.00 38.90 2.34
2919 3600 6.978338 ACTCAACTACAAATCTGTCGTTAGA 58.022 36.000 0.00 0.00 38.90 2.10
2920 3601 7.603651 ACTCAACTACAAATCTGTCGTTAGAT 58.396 34.615 0.00 0.00 38.90 1.98
2921 3602 8.088981 ACTCAACTACAAATCTGTCGTTAGATT 58.911 33.333 9.91 9.91 46.50 2.40
2932 3613 7.072177 TCTGTCGTTAGATTTTTAAGCATGG 57.928 36.000 0.00 0.00 0.00 3.66
2933 3614 5.636837 TGTCGTTAGATTTTTAAGCATGGC 58.363 37.500 0.00 0.00 0.00 4.40
2934 3615 5.414454 TGTCGTTAGATTTTTAAGCATGGCT 59.586 36.000 0.00 0.00 42.56 4.75
2935 3616 6.596106 TGTCGTTAGATTTTTAAGCATGGCTA 59.404 34.615 0.00 0.00 38.25 3.93
2936 3617 7.119992 TGTCGTTAGATTTTTAAGCATGGCTAA 59.880 33.333 0.00 0.00 38.25 3.09
2937 3618 8.129211 GTCGTTAGATTTTTAAGCATGGCTAAT 58.871 33.333 0.00 0.00 38.25 1.73
2938 3619 8.342634 TCGTTAGATTTTTAAGCATGGCTAATC 58.657 33.333 0.00 0.00 38.25 1.75
2939 3620 8.128582 CGTTAGATTTTTAAGCATGGCTAATCA 58.871 33.333 11.74 0.09 38.25 2.57
2940 3621 9.801873 GTTAGATTTTTAAGCATGGCTAATCAA 57.198 29.630 11.74 4.48 38.25 2.57
2942 3623 8.707938 AGATTTTTAAGCATGGCTAATCAAAC 57.292 30.769 11.74 0.00 38.25 2.93
2943 3624 6.942886 TTTTTAAGCATGGCTAATCAAACG 57.057 33.333 0.00 0.00 38.25 3.60
2944 3625 5.637006 TTTAAGCATGGCTAATCAAACGT 57.363 34.783 0.00 0.00 38.25 3.99
2945 3626 5.637006 TTAAGCATGGCTAATCAAACGTT 57.363 34.783 0.00 0.00 38.25 3.99
2946 3627 4.519540 AAGCATGGCTAATCAAACGTTT 57.480 36.364 7.96 7.96 38.25 3.60
2947 3628 4.519540 AGCATGGCTAATCAAACGTTTT 57.480 36.364 11.66 0.00 36.99 2.43
2948 3629 4.881920 AGCATGGCTAATCAAACGTTTTT 58.118 34.783 11.66 7.00 36.99 1.94
2972 3653 9.743057 TTTTATGATATTTTATGTTTGCCGAGG 57.257 29.630 0.00 0.00 0.00 4.63
2973 3654 8.684386 TTATGATATTTTATGTTTGCCGAGGA 57.316 30.769 0.00 0.00 0.00 3.71
2974 3655 7.765695 ATGATATTTTATGTTTGCCGAGGAT 57.234 32.000 0.00 0.00 0.00 3.24
2975 3656 6.969366 TGATATTTTATGTTTGCCGAGGATG 58.031 36.000 0.00 0.00 0.00 3.51
2976 3657 6.770303 TGATATTTTATGTTTGCCGAGGATGA 59.230 34.615 0.00 0.00 0.00 2.92
2977 3658 7.448161 TGATATTTTATGTTTGCCGAGGATGAT 59.552 33.333 0.00 0.00 0.00 2.45
2978 3659 8.862325 ATATTTTATGTTTGCCGAGGATGATA 57.138 30.769 0.00 0.00 0.00 2.15
2979 3660 7.581213 ATTTTATGTTTGCCGAGGATGATAA 57.419 32.000 0.00 0.00 0.00 1.75
2980 3661 6.618287 TTTATGTTTGCCGAGGATGATAAG 57.382 37.500 0.00 0.00 0.00 1.73
2981 3662 3.627395 TGTTTGCCGAGGATGATAAGT 57.373 42.857 0.00 0.00 0.00 2.24
2982 3663 3.950397 TGTTTGCCGAGGATGATAAGTT 58.050 40.909 0.00 0.00 0.00 2.66
2983 3664 4.331968 TGTTTGCCGAGGATGATAAGTTT 58.668 39.130 0.00 0.00 0.00 2.66
2984 3665 5.492895 TGTTTGCCGAGGATGATAAGTTTA 58.507 37.500 0.00 0.00 0.00 2.01
2985 3666 5.584649 TGTTTGCCGAGGATGATAAGTTTAG 59.415 40.000 0.00 0.00 0.00 1.85
2986 3667 5.353394 TTGCCGAGGATGATAAGTTTAGT 57.647 39.130 0.00 0.00 0.00 2.24
2987 3668 5.353394 TGCCGAGGATGATAAGTTTAGTT 57.647 39.130 0.00 0.00 0.00 2.24
2988 3669 5.116180 TGCCGAGGATGATAAGTTTAGTTG 58.884 41.667 0.00 0.00 0.00 3.16
2989 3670 4.511826 GCCGAGGATGATAAGTTTAGTTGG 59.488 45.833 0.00 0.00 0.00 3.77
2990 3671 4.511826 CCGAGGATGATAAGTTTAGTTGGC 59.488 45.833 0.00 0.00 0.00 4.52
2991 3672 5.116180 CGAGGATGATAAGTTTAGTTGGCA 58.884 41.667 0.00 0.00 0.00 4.92
2992 3673 5.584649 CGAGGATGATAAGTTTAGTTGGCAA 59.415 40.000 0.00 0.00 0.00 4.52
2993 3674 6.238211 CGAGGATGATAAGTTTAGTTGGCAAG 60.238 42.308 0.00 0.00 0.00 4.01
2994 3675 5.358160 AGGATGATAAGTTTAGTTGGCAAGC 59.642 40.000 0.00 0.00 0.00 4.01
2995 3676 5.125417 GGATGATAAGTTTAGTTGGCAAGCA 59.875 40.000 0.00 0.00 0.00 3.91
2996 3677 6.183360 GGATGATAAGTTTAGTTGGCAAGCAT 60.183 38.462 0.00 0.00 0.00 3.79
2997 3678 5.953183 TGATAAGTTTAGTTGGCAAGCATG 58.047 37.500 0.00 0.00 0.00 4.06
2998 3679 5.709631 TGATAAGTTTAGTTGGCAAGCATGA 59.290 36.000 0.00 0.00 0.00 3.07
2999 3680 6.377996 TGATAAGTTTAGTTGGCAAGCATGAT 59.622 34.615 0.00 0.00 0.00 2.45
3000 3681 7.555914 TGATAAGTTTAGTTGGCAAGCATGATA 59.444 33.333 0.00 0.00 0.00 2.15
3001 3682 6.588719 AAGTTTAGTTGGCAAGCATGATAA 57.411 33.333 0.00 0.00 0.00 1.75
3002 3683 6.588719 AGTTTAGTTGGCAAGCATGATAAA 57.411 33.333 0.00 0.00 0.00 1.40
3003 3684 7.174107 AGTTTAGTTGGCAAGCATGATAAAT 57.826 32.000 0.00 0.00 0.00 1.40
3004 3685 7.614494 AGTTTAGTTGGCAAGCATGATAAATT 58.386 30.769 0.00 0.00 0.00 1.82
3005 3686 8.748412 AGTTTAGTTGGCAAGCATGATAAATTA 58.252 29.630 0.00 0.00 0.00 1.40
3006 3687 9.023967 GTTTAGTTGGCAAGCATGATAAATTAG 57.976 33.333 0.00 0.00 0.00 1.73
3007 3688 6.780457 AGTTGGCAAGCATGATAAATTAGT 57.220 33.333 0.00 0.00 0.00 2.24
3008 3689 7.174107 AGTTGGCAAGCATGATAAATTAGTT 57.826 32.000 0.00 0.00 0.00 2.24
3009 3690 7.260603 AGTTGGCAAGCATGATAAATTAGTTC 58.739 34.615 0.00 0.00 0.00 3.01
3010 3691 6.147864 TGGCAAGCATGATAAATTAGTTCC 57.852 37.500 0.00 0.00 0.00 3.62
3011 3692 5.655974 TGGCAAGCATGATAAATTAGTTCCA 59.344 36.000 0.00 0.00 0.00 3.53
3012 3693 6.183360 TGGCAAGCATGATAAATTAGTTCCAG 60.183 38.462 0.00 0.00 0.00 3.86
3013 3694 6.039717 GGCAAGCATGATAAATTAGTTCCAGA 59.960 38.462 0.00 0.00 0.00 3.86
3014 3695 7.255730 GGCAAGCATGATAAATTAGTTCCAGAT 60.256 37.037 0.00 0.00 0.00 2.90
3015 3696 8.139989 GCAAGCATGATAAATTAGTTCCAGATT 58.860 33.333 0.00 0.00 0.00 2.40
3056 3737 8.789825 AATTATCATGCTTGTTAAATTTGCCA 57.210 26.923 0.00 0.00 0.00 4.92
3057 3738 8.789825 ATTATCATGCTTGTTAAATTTGCCAA 57.210 26.923 0.00 2.85 0.00 4.52
3058 3739 5.921004 TCATGCTTGTTAAATTTGCCAAC 57.079 34.783 0.00 0.00 0.00 3.77
3059 3740 4.754114 TCATGCTTGTTAAATTTGCCAACC 59.246 37.500 0.00 0.00 0.00 3.77
3060 3741 4.414337 TGCTTGTTAAATTTGCCAACCT 57.586 36.364 0.00 0.00 0.00 3.50
3061 3742 4.376146 TGCTTGTTAAATTTGCCAACCTC 58.624 39.130 0.00 0.00 0.00 3.85
3062 3743 3.428534 GCTTGTTAAATTTGCCAACCTCG 59.571 43.478 0.00 0.00 0.00 4.63
3063 3744 3.019933 TGTTAAATTTGCCAACCTCGC 57.980 42.857 0.00 0.00 0.00 5.03
3064 3745 2.362397 TGTTAAATTTGCCAACCTCGCA 59.638 40.909 0.00 0.00 0.00 5.10
3065 3746 2.715737 TAAATTTGCCAACCTCGCAC 57.284 45.000 0.00 0.00 35.56 5.34
3066 3747 0.033366 AAATTTGCCAACCTCGCACC 59.967 50.000 0.00 0.00 35.56 5.01
3067 3748 1.112315 AATTTGCCAACCTCGCACCA 61.112 50.000 0.00 0.00 35.56 4.17
3068 3749 1.112315 ATTTGCCAACCTCGCACCAA 61.112 50.000 0.00 0.00 35.56 3.67
3069 3750 1.323271 TTTGCCAACCTCGCACCAAA 61.323 50.000 0.00 0.00 35.56 3.28
3070 3751 1.323271 TTGCCAACCTCGCACCAAAA 61.323 50.000 0.00 0.00 35.56 2.44
3071 3752 1.112315 TGCCAACCTCGCACCAAAAT 61.112 50.000 0.00 0.00 0.00 1.82
3072 3753 0.885196 GCCAACCTCGCACCAAAATA 59.115 50.000 0.00 0.00 0.00 1.40
3073 3754 1.271102 GCCAACCTCGCACCAAAATAA 59.729 47.619 0.00 0.00 0.00 1.40
3074 3755 2.288518 GCCAACCTCGCACCAAAATAAA 60.289 45.455 0.00 0.00 0.00 1.40
3075 3756 3.616317 GCCAACCTCGCACCAAAATAAAT 60.616 43.478 0.00 0.00 0.00 1.40
3076 3757 4.565022 CCAACCTCGCACCAAAATAAATT 58.435 39.130 0.00 0.00 0.00 1.82
3077 3758 4.994217 CCAACCTCGCACCAAAATAAATTT 59.006 37.500 0.00 0.00 0.00 1.82
3078 3759 5.107143 CCAACCTCGCACCAAAATAAATTTG 60.107 40.000 0.00 0.00 46.54 2.32
3079 3760 5.208463 ACCTCGCACCAAAATAAATTTGT 57.792 34.783 0.00 0.00 45.72 2.83
3080 3761 5.227152 ACCTCGCACCAAAATAAATTTGTC 58.773 37.500 0.00 0.00 45.72 3.18
3081 3762 4.323336 CCTCGCACCAAAATAAATTTGTCG 59.677 41.667 0.00 0.00 45.72 4.35
3082 3763 4.861210 TCGCACCAAAATAAATTTGTCGT 58.139 34.783 0.00 0.00 45.72 4.34
3083 3764 5.998553 TCGCACCAAAATAAATTTGTCGTA 58.001 33.333 0.00 0.00 45.72 3.43
3084 3765 6.436261 TCGCACCAAAATAAATTTGTCGTAA 58.564 32.000 0.00 0.00 45.72 3.18
3085 3766 6.916387 TCGCACCAAAATAAATTTGTCGTAAA 59.084 30.769 0.00 0.00 45.72 2.01
3086 3767 7.434307 TCGCACCAAAATAAATTTGTCGTAAAA 59.566 29.630 0.00 0.00 45.72 1.52
3087 3768 8.056571 CGCACCAAAATAAATTTGTCGTAAAAA 58.943 29.630 0.00 0.00 45.72 1.94
3088 3769 9.364110 GCACCAAAATAAATTTGTCGTAAAAAG 57.636 29.630 0.00 0.00 45.72 2.27
3100 3781 7.769719 TTGTCGTAAAAAGTATTCGATTTGC 57.230 32.000 0.00 0.00 33.35 3.68
3101 3782 6.308675 TGTCGTAAAAAGTATTCGATTTGCC 58.691 36.000 0.00 0.00 33.35 4.52
3102 3783 6.073167 TGTCGTAAAAAGTATTCGATTTGCCA 60.073 34.615 0.00 0.00 33.35 4.92
3103 3784 6.964934 GTCGTAAAAAGTATTCGATTTGCCAT 59.035 34.615 0.00 0.00 33.35 4.40
3104 3785 6.964370 TCGTAAAAAGTATTCGATTTGCCATG 59.036 34.615 0.00 0.00 0.00 3.66
3105 3786 6.291060 CGTAAAAAGTATTCGATTTGCCATGC 60.291 38.462 0.00 0.00 0.00 4.06
3106 3787 4.989279 AAAGTATTCGATTTGCCATGCT 57.011 36.364 0.00 0.00 0.00 3.79
3107 3788 4.989279 AAGTATTCGATTTGCCATGCTT 57.011 36.364 0.00 0.00 0.00 3.91
3108 3789 6.449635 AAAGTATTCGATTTGCCATGCTTA 57.550 33.333 0.00 0.00 0.00 3.09
3109 3790 6.449635 AAGTATTCGATTTGCCATGCTTAA 57.550 33.333 0.00 0.00 0.00 1.85
3110 3791 6.449635 AGTATTCGATTTGCCATGCTTAAA 57.550 33.333 0.00 0.00 0.00 1.52
3111 3792 6.862209 AGTATTCGATTTGCCATGCTTAAAA 58.138 32.000 0.00 0.00 0.00 1.52
3112 3793 7.491682 AGTATTCGATTTGCCATGCTTAAAAT 58.508 30.769 0.00 0.00 0.00 1.82
3113 3794 7.981225 AGTATTCGATTTGCCATGCTTAAAATT 59.019 29.630 0.00 0.00 0.00 1.82
3114 3795 7.614124 ATTCGATTTGCCATGCTTAAAATTT 57.386 28.000 0.00 0.00 0.00 1.82
3115 3796 6.406093 TCGATTTGCCATGCTTAAAATTTG 57.594 33.333 0.00 0.00 0.00 2.32
3116 3797 5.350914 TCGATTTGCCATGCTTAAAATTTGG 59.649 36.000 0.00 0.00 0.00 3.28
3119 3800 1.665169 GCCATGCTTAAAATTTGGCCG 59.335 47.619 0.00 0.00 45.63 6.13
3120 3801 2.934801 GCCATGCTTAAAATTTGGCCGT 60.935 45.455 0.00 0.00 45.63 5.68
3121 3802 2.929398 CCATGCTTAAAATTTGGCCGTC 59.071 45.455 0.00 0.00 0.00 4.79
3122 3803 2.339728 TGCTTAAAATTTGGCCGTCG 57.660 45.000 0.00 0.00 0.00 5.12
3123 3804 1.068194 TGCTTAAAATTTGGCCGTCGG 60.068 47.619 6.99 6.99 0.00 4.79
3124 3805 1.200484 GCTTAAAATTTGGCCGTCGGA 59.800 47.619 17.49 0.00 0.00 4.55
3125 3806 2.159296 GCTTAAAATTTGGCCGTCGGAT 60.159 45.455 17.49 0.00 0.00 4.18
3126 3807 3.674955 GCTTAAAATTTGGCCGTCGGATT 60.675 43.478 17.49 2.41 0.00 3.01
3127 3808 4.490743 CTTAAAATTTGGCCGTCGGATTT 58.509 39.130 17.49 9.13 0.00 2.17
3128 3809 3.394674 AAAATTTGGCCGTCGGATTTT 57.605 38.095 17.49 14.67 0.00 1.82
3129 3810 3.394674 AAATTTGGCCGTCGGATTTTT 57.605 38.095 17.49 4.01 0.00 1.94
3176 3857 8.833231 ATACCATACACACAGCTTATATTGTC 57.167 34.615 0.00 0.00 0.00 3.18
3177 3858 6.649155 ACCATACACACAGCTTATATTGTCA 58.351 36.000 0.00 0.00 0.00 3.58
3178 3859 7.109501 ACCATACACACAGCTTATATTGTCAA 58.890 34.615 0.00 0.00 0.00 3.18
3179 3860 7.280876 ACCATACACACAGCTTATATTGTCAAG 59.719 37.037 0.00 0.00 0.00 3.02
3180 3861 7.280876 CCATACACACAGCTTATATTGTCAAGT 59.719 37.037 0.00 0.00 0.00 3.16
3181 3862 6.486253 ACACACAGCTTATATTGTCAAGTG 57.514 37.500 0.00 0.00 0.00 3.16
3182 3863 5.412594 ACACACAGCTTATATTGTCAAGTGG 59.587 40.000 0.00 0.00 0.00 4.00
3183 3864 5.643348 CACACAGCTTATATTGTCAAGTGGA 59.357 40.000 0.00 0.00 0.00 4.02
3184 3865 5.877012 ACACAGCTTATATTGTCAAGTGGAG 59.123 40.000 0.00 0.00 0.00 3.86
3186 3867 5.121811 CAGCTTATATTGTCAAGTGGAGCT 58.878 41.667 9.31 9.31 38.38 4.09
3188 3869 6.201806 CAGCTTATATTGTCAAGTGGAGCTAC 59.798 42.308 12.93 0.00 36.30 3.58
3189 3870 6.098982 AGCTTATATTGTCAAGTGGAGCTACT 59.901 38.462 12.10 0.00 36.30 2.57
3190 3871 6.201806 GCTTATATTGTCAAGTGGAGCTACTG 59.798 42.308 0.00 0.00 0.00 2.74
3209 3891 2.620115 CTGTGACACTGCCTTGAAATGT 59.380 45.455 7.20 0.00 0.00 2.71
3261 3945 9.979897 AATCTATTAACATGCATGTACCCATAT 57.020 29.630 31.55 16.92 40.80 1.78
3294 3978 1.372501 ACCCAGGGTGCAGAATAAGT 58.627 50.000 11.70 0.00 32.98 2.24
3295 3979 1.710809 ACCCAGGGTGCAGAATAAGTT 59.289 47.619 11.70 0.00 32.98 2.66
3296 3980 2.916934 ACCCAGGGTGCAGAATAAGTTA 59.083 45.455 11.70 0.00 32.98 2.24
3297 3981 3.527665 ACCCAGGGTGCAGAATAAGTTAT 59.472 43.478 11.70 0.00 32.98 1.89
3298 3982 4.017499 ACCCAGGGTGCAGAATAAGTTATT 60.017 41.667 11.70 7.87 32.98 1.40
3299 3983 4.580580 CCCAGGGTGCAGAATAAGTTATTC 59.419 45.833 22.80 22.80 43.77 1.75
3300 3984 8.008283 ACCCAGGGTGCAGAATAAGTTATTCT 62.008 42.308 25.91 25.91 44.21 2.40
3301 3985 9.397480 ACCCAGGGTGCAGAATAAGTTATTCTT 62.397 40.741 28.07 14.74 42.47 2.52
3310 3994 6.846325 GAATAAGTTATTCTTCACCCGAGG 57.154 41.667 22.93 0.00 41.00 4.63
3311 3995 5.952347 ATAAGTTATTCTTCACCCGAGGT 57.048 39.130 0.00 0.00 37.56 3.85
3312 3996 7.427989 AATAAGTTATTCTTCACCCGAGGTA 57.572 36.000 2.10 0.00 37.56 3.08
3313 3997 5.750352 AAGTTATTCTTCACCCGAGGTAA 57.250 39.130 0.00 0.00 32.11 2.85
3314 3998 5.952347 AGTTATTCTTCACCCGAGGTAAT 57.048 39.130 0.00 0.00 32.11 1.89
3315 3999 5.915175 AGTTATTCTTCACCCGAGGTAATC 58.085 41.667 0.00 0.00 32.11 1.75
3316 4000 5.661759 AGTTATTCTTCACCCGAGGTAATCT 59.338 40.000 0.00 0.00 32.11 2.40
3317 4001 6.156429 AGTTATTCTTCACCCGAGGTAATCTT 59.844 38.462 0.00 0.00 32.11 2.40
3318 4002 7.343833 AGTTATTCTTCACCCGAGGTAATCTTA 59.656 37.037 0.00 0.00 32.11 2.10
3319 4003 4.996788 TCTTCACCCGAGGTAATCTTAC 57.003 45.455 0.00 0.00 32.11 2.34
3320 4004 3.379372 TCTTCACCCGAGGTAATCTTACG 59.621 47.826 0.00 0.00 32.11 3.18
3321 4005 3.003394 TCACCCGAGGTAATCTTACGA 57.997 47.619 0.00 0.00 32.11 3.43
3322 4006 2.684881 TCACCCGAGGTAATCTTACGAC 59.315 50.000 0.00 0.00 32.11 4.34
3323 4007 2.027385 ACCCGAGGTAATCTTACGACC 58.973 52.381 0.00 0.00 32.11 4.79
3324 4008 2.026641 CCCGAGGTAATCTTACGACCA 58.973 52.381 0.00 0.00 35.56 4.02
3325 4009 2.626743 CCCGAGGTAATCTTACGACCAT 59.373 50.000 0.00 0.00 35.56 3.55
3326 4010 3.069158 CCCGAGGTAATCTTACGACCATT 59.931 47.826 0.00 0.00 35.56 3.16
3327 4011 4.442472 CCCGAGGTAATCTTACGACCATTT 60.442 45.833 0.00 0.00 35.56 2.32
3328 4012 4.743644 CCGAGGTAATCTTACGACCATTTC 59.256 45.833 0.00 0.00 35.56 2.17
3329 4013 5.345702 CGAGGTAATCTTACGACCATTTCA 58.654 41.667 0.00 0.00 35.56 2.69
3330 4014 5.983720 CGAGGTAATCTTACGACCATTTCAT 59.016 40.000 0.00 0.00 35.56 2.57
3331 4015 7.143340 CGAGGTAATCTTACGACCATTTCATA 58.857 38.462 0.00 0.00 35.56 2.15
3332 4016 7.650504 CGAGGTAATCTTACGACCATTTCATAA 59.349 37.037 0.00 0.00 35.56 1.90
3333 4017 9.321562 GAGGTAATCTTACGACCATTTCATAAA 57.678 33.333 0.00 0.00 35.56 1.40
3334 4018 9.847224 AGGTAATCTTACGACCATTTCATAAAT 57.153 29.630 0.00 0.00 35.56 1.40
3776 4460 1.067212 GATGTTGACTCCGGATAGCGT 59.933 52.381 3.57 0.00 0.00 5.07
3781 4465 0.248539 GACTCCGGATAGCGTGTGAC 60.249 60.000 3.57 0.00 0.00 3.67
3783 4467 0.525668 CTCCGGATAGCGTGTGACAC 60.526 60.000 3.57 5.47 0.00 3.67
3787 4471 1.594833 GATAGCGTGTGACACCCCA 59.405 57.895 10.52 0.00 0.00 4.96
3835 4519 2.731572 ACTACTGTGCATACGGGTAGT 58.268 47.619 7.81 7.81 40.61 2.73
4189 4876 4.454504 GCACGTTAATTTCCTCTTCCAGAA 59.545 41.667 0.00 0.00 0.00 3.02
4190 4877 5.390991 GCACGTTAATTTCCTCTTCCAGAAG 60.391 44.000 0.73 0.73 39.71 2.85
4192 4879 5.701290 ACGTTAATTTCCTCTTCCAGAAGTG 59.299 40.000 7.26 5.06 39.38 3.16
4498 5194 1.451207 TTGGACCGATTGGATGGCG 60.451 57.895 5.81 0.00 39.21 5.69
4614 5310 4.309347 ATCGACCGACCGATCGCG 62.309 66.667 10.32 8.96 45.03 5.87
4739 5437 2.007113 ATACACGCGTACGATGCCCA 62.007 55.000 21.65 5.80 43.93 5.36
4812 5510 3.343421 GGGCGTGTCGTGTTGGTC 61.343 66.667 0.00 0.00 0.00 4.02
4871 5569 0.610174 AGAGCTTCATCGAGCACCAA 59.390 50.000 0.00 0.00 45.12 3.67
5055 5753 4.215742 CGCCCGCCGTATTCTCCA 62.216 66.667 0.00 0.00 0.00 3.86
5291 5989 4.847444 GGCGAGCTGGAGAAGGCC 62.847 72.222 0.00 0.00 0.00 5.19
5546 6248 0.229753 GTATACGTGCACGCATGAGC 59.770 55.000 37.35 20.27 44.43 4.26
5572 6274 2.109425 ACTAAAAGGCCCGTGATGTC 57.891 50.000 0.00 0.00 0.00 3.06
5599 6304 2.817901 ACGGAGTGCGTTTATATGGAC 58.182 47.619 2.91 0.00 42.51 4.02
5618 6323 1.264141 CGCGCTTTTGCTGTTCAGTG 61.264 55.000 5.56 0.00 44.80 3.66
5730 6435 4.189188 CTGGCCGCATGCAGCTTC 62.189 66.667 24.30 10.24 43.89 3.86
5738 6443 1.645034 GCATGCAGCTTCGTCTCTTA 58.355 50.000 14.21 0.00 41.15 2.10
5831 6548 3.382832 CGGTGTCCTCCGCCTTCT 61.383 66.667 0.00 0.00 43.96 2.85
5832 6549 2.050350 CGGTGTCCTCCGCCTTCTA 61.050 63.158 0.00 0.00 43.96 2.10
5833 6550 1.601419 CGGTGTCCTCCGCCTTCTAA 61.601 60.000 0.00 0.00 43.96 2.10
5834 6551 0.108281 GGTGTCCTCCGCCTTCTAAC 60.108 60.000 0.00 0.00 40.81 2.34
5835 6552 0.108281 GTGTCCTCCGCCTTCTAACC 60.108 60.000 0.00 0.00 0.00 2.85
5836 6553 0.543410 TGTCCTCCGCCTTCTAACCA 60.543 55.000 0.00 0.00 0.00 3.67
5837 6554 0.831307 GTCCTCCGCCTTCTAACCAT 59.169 55.000 0.00 0.00 0.00 3.55
5838 6555 2.037144 GTCCTCCGCCTTCTAACCATA 58.963 52.381 0.00 0.00 0.00 2.74
5839 6556 2.036089 GTCCTCCGCCTTCTAACCATAG 59.964 54.545 0.00 0.00 0.00 2.23
5840 6557 1.270358 CCTCCGCCTTCTAACCATAGC 60.270 57.143 0.00 0.00 0.00 2.97
5841 6558 1.412710 CTCCGCCTTCTAACCATAGCA 59.587 52.381 0.00 0.00 0.00 3.49
5842 6559 1.138266 TCCGCCTTCTAACCATAGCAC 59.862 52.381 0.00 0.00 0.00 4.40
5843 6560 1.583054 CGCCTTCTAACCATAGCACC 58.417 55.000 0.00 0.00 0.00 5.01
5844 6561 1.139058 CGCCTTCTAACCATAGCACCT 59.861 52.381 0.00 0.00 0.00 4.00
5845 6562 2.565841 GCCTTCTAACCATAGCACCTG 58.434 52.381 0.00 0.00 0.00 4.00
5846 6563 2.746472 GCCTTCTAACCATAGCACCTGG 60.746 54.545 0.00 0.00 39.80 4.45
5847 6564 2.771943 CCTTCTAACCATAGCACCTGGA 59.228 50.000 0.00 0.00 37.22 3.86
5848 6565 3.199946 CCTTCTAACCATAGCACCTGGAA 59.800 47.826 0.00 0.00 37.22 3.53
5849 6566 4.446371 CTTCTAACCATAGCACCTGGAAG 58.554 47.826 0.00 0.00 37.22 3.46
5862 6579 1.439679 CTGGAAGGAGTACAAACGCC 58.560 55.000 0.00 0.00 45.31 5.68
5873 6590 2.436646 AAACGCCGAGCATCCAGG 60.437 61.111 0.00 0.00 0.00 4.45
5874 6591 3.254024 AAACGCCGAGCATCCAGGT 62.254 57.895 0.00 0.00 0.00 4.00
5882 6599 1.738365 CGAGCATCCAGGTGAAGTGAG 60.738 57.143 0.00 0.00 0.00 3.51
5958 6675 4.938226 ACCGTAACTACTACTGTGTACTCC 59.062 45.833 0.00 0.00 0.00 3.85
5961 6678 5.220303 CGTAACTACTACTGTGTACTCCGAC 60.220 48.000 0.00 0.00 0.00 4.79
5969 6686 3.010420 CTGTGTACTCCGACTGAGATCA 58.990 50.000 0.35 0.00 44.42 2.92
6057 6774 1.134965 AGCATCTGCAGTCGGACTTAC 60.135 52.381 14.67 4.46 45.16 2.34
6349 7085 1.136984 GAGTAGCTACGCGTGCACT 59.863 57.895 24.59 23.91 0.00 4.40
6419 7155 2.787473 TGCATCTTGATCTTTCGGGT 57.213 45.000 0.00 0.00 0.00 5.28
6429 7166 4.975631 TGATCTTTCGGGTTTGGACTTTA 58.024 39.130 0.00 0.00 0.00 1.85
6461 7204 5.344933 GCGTTTCAAAATCATTTGGACTACC 59.655 40.000 1.86 0.00 44.88 3.18
6470 7213 2.053747 TTTGGACTACCCCATCACCT 57.946 50.000 0.00 0.00 35.87 4.00
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.601057 CGGTTGGTAAGGGCCTTTTG 59.399 55.000 26.29 3.03 0.00 2.44
1 2 0.541063 CCGGTTGGTAAGGGCCTTTT 60.541 55.000 26.29 2.86 0.00 2.27
2 3 1.076014 CCGGTTGGTAAGGGCCTTT 59.924 57.895 26.29 5.08 0.00 3.11
3 4 2.761160 CCGGTTGGTAAGGGCCTT 59.239 61.111 24.44 24.44 0.00 4.35
4 5 3.335729 CCCGGTTGGTAAGGGCCT 61.336 66.667 0.00 0.00 38.51 5.19
5 6 3.332385 TCCCGGTTGGTAAGGGCC 61.332 66.667 0.00 0.00 44.70 5.80
6 7 2.045634 GTCCCGGTTGGTAAGGGC 60.046 66.667 0.00 0.00 44.70 5.19
7 8 0.330267 ATTGTCCCGGTTGGTAAGGG 59.670 55.000 0.00 0.00 46.40 3.95
8 9 2.420967 CCTATTGTCCCGGTTGGTAAGG 60.421 54.545 0.00 0.00 34.77 2.69
9 10 2.914059 CCTATTGTCCCGGTTGGTAAG 58.086 52.381 0.00 0.00 34.77 2.34
10 11 1.065272 GCCTATTGTCCCGGTTGGTAA 60.065 52.381 0.00 0.00 34.77 2.85
11 12 0.542805 GCCTATTGTCCCGGTTGGTA 59.457 55.000 0.00 0.00 34.77 3.25
12 13 1.301954 GCCTATTGTCCCGGTTGGT 59.698 57.895 0.00 0.00 34.77 3.67
13 14 1.453197 GGCCTATTGTCCCGGTTGG 60.453 63.158 0.00 0.00 0.00 3.77
14 15 1.453197 GGGCCTATTGTCCCGGTTG 60.453 63.158 0.84 0.00 32.00 3.77
15 16 3.004090 GGGCCTATTGTCCCGGTT 58.996 61.111 0.84 0.00 32.00 4.44
19 20 3.101643 AGAAAAAGGGCCTATTGTCCC 57.898 47.619 6.41 0.00 42.94 4.46
20 21 4.856509 AGTAGAAAAAGGGCCTATTGTCC 58.143 43.478 6.41 0.00 0.00 4.02
21 22 6.539103 CACTAGTAGAAAAAGGGCCTATTGTC 59.461 42.308 6.41 8.43 0.00 3.18
22 23 6.415573 CACTAGTAGAAAAAGGGCCTATTGT 58.584 40.000 6.41 6.68 0.00 2.71
23 24 5.297029 GCACTAGTAGAAAAAGGGCCTATTG 59.703 44.000 6.41 0.00 33.42 1.90
24 25 5.437946 GCACTAGTAGAAAAAGGGCCTATT 58.562 41.667 6.41 5.13 33.42 1.73
25 26 4.443034 CGCACTAGTAGAAAAAGGGCCTAT 60.443 45.833 6.41 0.00 36.26 2.57
26 27 3.118884 CGCACTAGTAGAAAAAGGGCCTA 60.119 47.826 6.41 0.00 36.26 3.93
27 28 2.354805 CGCACTAGTAGAAAAAGGGCCT 60.355 50.000 0.00 0.00 36.26 5.19
28 29 2.007608 CGCACTAGTAGAAAAAGGGCC 58.992 52.381 3.59 0.00 36.26 5.80
29 30 2.007608 CCGCACTAGTAGAAAAAGGGC 58.992 52.381 3.59 0.00 36.28 5.19
30 31 3.056035 ACTCCGCACTAGTAGAAAAAGGG 60.056 47.826 3.59 0.00 0.00 3.95
31 32 4.189639 ACTCCGCACTAGTAGAAAAAGG 57.810 45.455 3.59 0.43 0.00 3.11
32 33 5.341617 CCTACTCCGCACTAGTAGAAAAAG 58.658 45.833 15.25 0.00 46.20 2.27
33 34 4.381292 GCCTACTCCGCACTAGTAGAAAAA 60.381 45.833 15.25 0.00 46.20 1.94
34 35 3.129988 GCCTACTCCGCACTAGTAGAAAA 59.870 47.826 15.25 0.00 46.20 2.29
35 36 2.686915 GCCTACTCCGCACTAGTAGAAA 59.313 50.000 15.25 0.00 46.20 2.52
36 37 2.092538 AGCCTACTCCGCACTAGTAGAA 60.093 50.000 15.25 0.00 46.20 2.10
37 38 1.489649 AGCCTACTCCGCACTAGTAGA 59.510 52.381 15.25 0.00 46.20 2.59
38 39 1.604755 CAGCCTACTCCGCACTAGTAG 59.395 57.143 0.00 9.20 43.99 2.57
39 40 1.676746 CAGCCTACTCCGCACTAGTA 58.323 55.000 0.00 0.00 0.00 1.82
40 41 1.038130 CCAGCCTACTCCGCACTAGT 61.038 60.000 0.00 0.00 0.00 2.57
41 42 1.736586 CCAGCCTACTCCGCACTAG 59.263 63.158 0.00 0.00 0.00 2.57
42 43 2.423898 GCCAGCCTACTCCGCACTA 61.424 63.158 0.00 0.00 0.00 2.74
43 44 3.775654 GCCAGCCTACTCCGCACT 61.776 66.667 0.00 0.00 0.00 4.40
49 50 1.019805 GTGAAACCGCCAGCCTACTC 61.020 60.000 0.00 0.00 0.00 2.59
56 57 2.725203 TTCTCCCGTGAAACCGCCAG 62.725 60.000 0.00 0.00 0.00 4.85
74 75 5.373812 TCTTCAACCTCACCTTCTTCTTT 57.626 39.130 0.00 0.00 0.00 2.52
123 124 5.163258 GGACCACTAGATCTTGATCCAATGT 60.163 44.000 11.29 0.01 0.00 2.71
133 134 4.338795 TCTTCCAGGACCACTAGATCTT 57.661 45.455 0.00 0.00 0.00 2.40
242 257 1.152756 AAAGTCACCAGGGTGCACC 60.153 57.895 28.57 28.57 45.04 5.01
256 271 7.334421 ACGCTTATTGACTGTCATATTCAAAGT 59.666 33.333 11.86 3.38 32.57 2.66
266 281 3.259064 GCCTAACGCTTATTGACTGTCA 58.741 45.455 6.36 6.36 0.00 3.58
354 369 6.678568 TTCCATGTAACCATCCACATTTTT 57.321 33.333 0.00 0.00 33.12 1.94
408 712 9.189156 TGGAAATATATGTCCAAGGAGAAAAAG 57.811 33.333 20.61 0.00 41.02 2.27
860 1201 1.089123 ATAGCTAGGGAGGAGGGAGG 58.911 60.000 0.00 0.00 0.00 4.30
861 1202 5.374154 TCATATATAGCTAGGGAGGAGGGAG 59.626 48.000 0.00 0.00 0.00 4.30
862 1203 5.306182 TCATATATAGCTAGGGAGGAGGGA 58.694 45.833 0.00 0.00 0.00 4.20
863 1204 5.671463 TCATATATAGCTAGGGAGGAGGG 57.329 47.826 0.00 0.00 0.00 4.30
864 1205 6.252995 GGATCATATATAGCTAGGGAGGAGG 58.747 48.000 0.00 0.00 0.00 4.30
865 1206 6.252995 GGGATCATATATAGCTAGGGAGGAG 58.747 48.000 0.00 0.00 0.00 3.69
866 1207 5.076598 GGGGATCATATATAGCTAGGGAGGA 59.923 48.000 0.00 0.00 0.00 3.71
1301 1654 4.379652 TGATCGATCCACATGTGTTATGG 58.620 43.478 23.79 16.87 34.58 2.74
1309 1662 5.334724 TCCAGATATGATCGATCCACATG 57.665 43.478 22.31 13.68 0.00 3.21
1327 1685 1.153309 TGCATGCTGACCGATCCAG 60.153 57.895 20.33 0.00 34.88 3.86
1354 1712 2.874694 CGATGAATCCACGGCGCAG 61.875 63.158 10.83 8.25 0.00 5.18
1454 1850 2.974489 CTCGCACACGTACCGGTCT 61.974 63.158 12.40 0.00 41.18 3.85
1872 2268 2.898840 TAGGAGTAGCGGCGTCGG 60.899 66.667 13.05 0.00 36.79 4.79
2020 2421 9.903682 CAAAGACATATATAATCAAGCCCTTTG 57.096 33.333 0.00 0.00 38.17 2.77
2142 2549 4.458989 CCTTCTTTTGATTTGATGACCGGA 59.541 41.667 9.46 0.00 0.00 5.14
2296 2712 1.457346 CATCAGTTTCAGGTCCCAGC 58.543 55.000 0.00 0.00 0.00 4.85
2375 2791 8.518702 CCTAGCTTTGCTTTTCTAATTTCTCTT 58.481 33.333 0.00 0.00 40.44 2.85
2386 2802 3.428589 CCAGCATCCTAGCTTTGCTTTTC 60.429 47.826 9.57 0.00 43.94 2.29
2578 3006 0.041839 CAACAGTGTTGAGCGAGTGC 60.042 55.000 28.44 0.00 43.24 4.40
2587 3015 1.682854 ACCCATTCAGCAACAGTGTTG 59.317 47.619 28.10 28.10 37.32 3.33
2601 3029 3.329542 ATCGCCTCGCACACCCATT 62.330 57.895 0.00 0.00 0.00 3.16
2615 3043 3.113322 TCTAGTATGTCGTTTGCATCGC 58.887 45.455 6.89 3.98 0.00 4.58
2616 3044 5.890110 ATTCTAGTATGTCGTTTGCATCG 57.110 39.130 5.62 5.62 0.00 3.84
2644 3073 6.776887 ACTACCTACTCCCAGCTAGTAATA 57.223 41.667 0.00 0.00 0.00 0.98
2645 3074 5.666474 ACTACCTACTCCCAGCTAGTAAT 57.334 43.478 0.00 0.00 0.00 1.89
2646 3075 6.776887 ATACTACCTACTCCCAGCTAGTAA 57.223 41.667 0.00 0.00 0.00 2.24
2647 3076 6.776887 AATACTACCTACTCCCAGCTAGTA 57.223 41.667 0.00 0.00 0.00 1.82
2648 3077 5.666474 AATACTACCTACTCCCAGCTAGT 57.334 43.478 0.00 0.00 0.00 2.57
2649 3078 5.648960 GCTAATACTACCTACTCCCAGCTAG 59.351 48.000 0.00 0.00 0.00 3.42
2650 3079 5.074102 TGCTAATACTACCTACTCCCAGCTA 59.926 44.000 0.00 0.00 0.00 3.32
2651 3080 4.140994 TGCTAATACTACCTACTCCCAGCT 60.141 45.833 0.00 0.00 0.00 4.24
2652 3081 4.150359 TGCTAATACTACCTACTCCCAGC 58.850 47.826 0.00 0.00 0.00 4.85
2653 3082 5.386924 ACTGCTAATACTACCTACTCCCAG 58.613 45.833 0.00 0.00 0.00 4.45
2654 3083 5.103813 TGACTGCTAATACTACCTACTCCCA 60.104 44.000 0.00 0.00 0.00 4.37
2655 3084 5.241285 GTGACTGCTAATACTACCTACTCCC 59.759 48.000 0.00 0.00 0.00 4.30
2656 3085 5.826737 TGTGACTGCTAATACTACCTACTCC 59.173 44.000 0.00 0.00 0.00 3.85
2657 3086 6.939132 TGTGACTGCTAATACTACCTACTC 57.061 41.667 0.00 0.00 0.00 2.59
2695 3124 3.553828 TGCAGCTAGTAACCCATTACC 57.446 47.619 0.00 0.00 41.54 2.85
2718 3210 5.497464 AATTTTTGGAGGGGTTAACCATG 57.503 39.130 25.71 0.00 42.91 3.66
2719 3211 7.634526 TTTAATTTTTGGAGGGGTTAACCAT 57.365 32.000 25.71 13.82 42.91 3.55
2721 3213 7.994334 ACTTTTTAATTTTTGGAGGGGTTAACC 59.006 33.333 16.85 16.85 39.11 2.85
2722 3214 8.967664 ACTTTTTAATTTTTGGAGGGGTTAAC 57.032 30.769 0.00 0.00 0.00 2.01
2732 3260 9.909043 CGACTGGTTAAACTTTTTAATTTTTGG 57.091 29.630 0.00 0.00 0.00 3.28
2848 3511 8.738645 ACTGACAAGAGACTTATGTTTTCTTT 57.261 30.769 6.69 1.97 32.14 2.52
2851 3514 9.262358 AGTAACTGACAAGAGACTTATGTTTTC 57.738 33.333 0.00 0.00 0.00 2.29
2858 3539 9.139734 TCCTTTTAGTAACTGACAAGAGACTTA 57.860 33.333 0.00 0.00 0.00 2.24
2859 3540 8.019656 TCCTTTTAGTAACTGACAAGAGACTT 57.980 34.615 0.00 0.00 0.00 3.01
2879 3560 9.362151 TGTAGTTGAGTCCATTATTTTTCCTTT 57.638 29.630 0.00 0.00 0.00 3.11
2892 3573 4.038763 ACGACAGATTTGTAGTTGAGTCCA 59.961 41.667 0.00 0.00 39.71 4.02
2893 3574 4.557205 ACGACAGATTTGTAGTTGAGTCC 58.443 43.478 0.00 0.00 39.71 3.85
2906 3587 8.184192 CCATGCTTAAAAATCTAACGACAGATT 58.816 33.333 9.49 9.49 45.17 2.40
2907 3588 7.679638 GCCATGCTTAAAAATCTAACGACAGAT 60.680 37.037 0.00 0.00 36.83 2.90
2908 3589 6.403200 GCCATGCTTAAAAATCTAACGACAGA 60.403 38.462 0.00 0.00 0.00 3.41
2909 3590 5.739161 GCCATGCTTAAAAATCTAACGACAG 59.261 40.000 0.00 0.00 0.00 3.51
2910 3591 5.414454 AGCCATGCTTAAAAATCTAACGACA 59.586 36.000 0.00 0.00 33.89 4.35
2911 3592 5.880341 AGCCATGCTTAAAAATCTAACGAC 58.120 37.500 0.00 0.00 33.89 4.34
2912 3593 7.618502 TTAGCCATGCTTAAAAATCTAACGA 57.381 32.000 0.00 0.00 40.44 3.85
2913 3594 8.128582 TGATTAGCCATGCTTAAAAATCTAACG 58.871 33.333 9.46 0.00 40.44 3.18
2914 3595 9.801873 TTGATTAGCCATGCTTAAAAATCTAAC 57.198 29.630 9.46 0.00 40.44 2.34
2916 3597 9.801873 GTTTGATTAGCCATGCTTAAAAATCTA 57.198 29.630 9.46 2.02 40.44 1.98
2917 3598 7.489113 CGTTTGATTAGCCATGCTTAAAAATCT 59.511 33.333 9.46 0.00 40.44 2.40
2918 3599 7.275560 ACGTTTGATTAGCCATGCTTAAAAATC 59.724 33.333 0.00 0.00 40.44 2.17
2919 3600 7.096551 ACGTTTGATTAGCCATGCTTAAAAAT 58.903 30.769 0.00 0.00 40.44 1.82
2920 3601 6.451393 ACGTTTGATTAGCCATGCTTAAAAA 58.549 32.000 0.00 0.00 40.44 1.94
2921 3602 6.019779 ACGTTTGATTAGCCATGCTTAAAA 57.980 33.333 0.00 0.00 40.44 1.52
2922 3603 5.637006 ACGTTTGATTAGCCATGCTTAAA 57.363 34.783 0.00 0.00 40.44 1.52
2923 3604 5.637006 AACGTTTGATTAGCCATGCTTAA 57.363 34.783 0.00 0.00 40.44 1.85
2924 3605 5.637006 AAACGTTTGATTAGCCATGCTTA 57.363 34.783 13.81 0.00 40.44 3.09
2925 3606 4.519540 AAACGTTTGATTAGCCATGCTT 57.480 36.364 13.81 0.00 40.44 3.91
2926 3607 4.519540 AAAACGTTTGATTAGCCATGCT 57.480 36.364 15.46 0.00 43.41 3.79
2946 3627 9.743057 CCTCGGCAAACATAAAATATCATAAAA 57.257 29.630 0.00 0.00 0.00 1.52
2947 3628 9.126151 TCCTCGGCAAACATAAAATATCATAAA 57.874 29.630 0.00 0.00 0.00 1.40
2948 3629 8.684386 TCCTCGGCAAACATAAAATATCATAA 57.316 30.769 0.00 0.00 0.00 1.90
2949 3630 8.729756 CATCCTCGGCAAACATAAAATATCATA 58.270 33.333 0.00 0.00 0.00 2.15
2950 3631 7.448161 TCATCCTCGGCAAACATAAAATATCAT 59.552 33.333 0.00 0.00 0.00 2.45
2951 3632 6.770303 TCATCCTCGGCAAACATAAAATATCA 59.230 34.615 0.00 0.00 0.00 2.15
2952 3633 7.202016 TCATCCTCGGCAAACATAAAATATC 57.798 36.000 0.00 0.00 0.00 1.63
2953 3634 7.765695 ATCATCCTCGGCAAACATAAAATAT 57.234 32.000 0.00 0.00 0.00 1.28
2954 3635 8.684386 TTATCATCCTCGGCAAACATAAAATA 57.316 30.769 0.00 0.00 0.00 1.40
2955 3636 7.285401 ACTTATCATCCTCGGCAAACATAAAAT 59.715 33.333 0.00 0.00 0.00 1.82
2956 3637 6.601613 ACTTATCATCCTCGGCAAACATAAAA 59.398 34.615 0.00 0.00 0.00 1.52
2957 3638 6.119536 ACTTATCATCCTCGGCAAACATAAA 58.880 36.000 0.00 0.00 0.00 1.40
2958 3639 5.680619 ACTTATCATCCTCGGCAAACATAA 58.319 37.500 0.00 0.00 0.00 1.90
2959 3640 5.290493 ACTTATCATCCTCGGCAAACATA 57.710 39.130 0.00 0.00 0.00 2.29
2960 3641 4.156455 ACTTATCATCCTCGGCAAACAT 57.844 40.909 0.00 0.00 0.00 2.71
2961 3642 3.627395 ACTTATCATCCTCGGCAAACA 57.373 42.857 0.00 0.00 0.00 2.83
2962 3643 4.965119 AAACTTATCATCCTCGGCAAAC 57.035 40.909 0.00 0.00 0.00 2.93
2963 3644 5.741011 ACTAAACTTATCATCCTCGGCAAA 58.259 37.500 0.00 0.00 0.00 3.68
2964 3645 5.353394 ACTAAACTTATCATCCTCGGCAA 57.647 39.130 0.00 0.00 0.00 4.52
2965 3646 5.116180 CAACTAAACTTATCATCCTCGGCA 58.884 41.667 0.00 0.00 0.00 5.69
2966 3647 4.511826 CCAACTAAACTTATCATCCTCGGC 59.488 45.833 0.00 0.00 0.00 5.54
2967 3648 4.511826 GCCAACTAAACTTATCATCCTCGG 59.488 45.833 0.00 0.00 0.00 4.63
2968 3649 5.116180 TGCCAACTAAACTTATCATCCTCG 58.884 41.667 0.00 0.00 0.00 4.63
2969 3650 6.458888 GCTTGCCAACTAAACTTATCATCCTC 60.459 42.308 0.00 0.00 0.00 3.71
2970 3651 5.358160 GCTTGCCAACTAAACTTATCATCCT 59.642 40.000 0.00 0.00 0.00 3.24
2971 3652 5.125417 TGCTTGCCAACTAAACTTATCATCC 59.875 40.000 0.00 0.00 0.00 3.51
2972 3653 6.194796 TGCTTGCCAACTAAACTTATCATC 57.805 37.500 0.00 0.00 0.00 2.92
2973 3654 6.377996 TCATGCTTGCCAACTAAACTTATCAT 59.622 34.615 0.00 0.00 0.00 2.45
2974 3655 5.709631 TCATGCTTGCCAACTAAACTTATCA 59.290 36.000 0.00 0.00 0.00 2.15
2975 3656 6.194796 TCATGCTTGCCAACTAAACTTATC 57.805 37.500 0.00 0.00 0.00 1.75
2976 3657 6.780457 ATCATGCTTGCCAACTAAACTTAT 57.220 33.333 0.00 0.00 0.00 1.73
2977 3658 7.695480 TTATCATGCTTGCCAACTAAACTTA 57.305 32.000 0.00 0.00 0.00 2.24
2978 3659 6.588719 TTATCATGCTTGCCAACTAAACTT 57.411 33.333 0.00 0.00 0.00 2.66
2979 3660 6.588719 TTTATCATGCTTGCCAACTAAACT 57.411 33.333 0.00 0.00 0.00 2.66
2980 3661 7.832503 AATTTATCATGCTTGCCAACTAAAC 57.167 32.000 0.00 0.00 0.00 2.01
2981 3662 8.748412 ACTAATTTATCATGCTTGCCAACTAAA 58.252 29.630 0.00 0.00 0.00 1.85
2982 3663 8.292444 ACTAATTTATCATGCTTGCCAACTAA 57.708 30.769 0.00 0.00 0.00 2.24
2983 3664 7.880160 ACTAATTTATCATGCTTGCCAACTA 57.120 32.000 0.00 0.00 0.00 2.24
2984 3665 6.780457 ACTAATTTATCATGCTTGCCAACT 57.220 33.333 0.00 0.00 0.00 3.16
2985 3666 6.476706 GGAACTAATTTATCATGCTTGCCAAC 59.523 38.462 0.00 0.00 0.00 3.77
2986 3667 6.154192 TGGAACTAATTTATCATGCTTGCCAA 59.846 34.615 0.00 0.00 0.00 4.52
2987 3668 5.655974 TGGAACTAATTTATCATGCTTGCCA 59.344 36.000 0.00 0.00 0.00 4.92
2988 3669 6.039717 TCTGGAACTAATTTATCATGCTTGCC 59.960 38.462 0.00 0.00 0.00 4.52
2989 3670 7.031226 TCTGGAACTAATTTATCATGCTTGC 57.969 36.000 0.00 0.00 0.00 4.01
3030 3711 9.228949 TGGCAAATTTAACAAGCATGATAATTT 57.771 25.926 0.00 0.00 31.34 1.82
3031 3712 8.789825 TGGCAAATTTAACAAGCATGATAATT 57.210 26.923 0.00 0.00 0.00 1.40
3032 3713 8.667463 GTTGGCAAATTTAACAAGCATGATAAT 58.333 29.630 0.00 0.00 0.00 1.28
3033 3714 7.118971 GGTTGGCAAATTTAACAAGCATGATAA 59.881 33.333 21.54 0.00 40.09 1.75
3034 3715 6.593382 GGTTGGCAAATTTAACAAGCATGATA 59.407 34.615 21.54 0.00 40.09 2.15
3035 3716 5.412286 GGTTGGCAAATTTAACAAGCATGAT 59.588 36.000 21.54 0.00 40.09 2.45
3036 3717 4.754114 GGTTGGCAAATTTAACAAGCATGA 59.246 37.500 21.54 0.00 40.09 3.07
3037 3718 4.756135 AGGTTGGCAAATTTAACAAGCATG 59.244 37.500 25.21 0.00 42.08 4.06
3038 3719 4.971939 AGGTTGGCAAATTTAACAAGCAT 58.028 34.783 25.21 14.66 42.08 3.79
3039 3720 4.376146 GAGGTTGGCAAATTTAACAAGCA 58.624 39.130 25.21 3.59 42.08 3.91
3040 3721 3.428534 CGAGGTTGGCAAATTTAACAAGC 59.571 43.478 20.04 20.04 40.51 4.01
3041 3722 3.428534 GCGAGGTTGGCAAATTTAACAAG 59.571 43.478 0.00 0.00 0.00 3.16
3042 3723 3.181475 TGCGAGGTTGGCAAATTTAACAA 60.181 39.130 0.00 4.22 37.49 2.83
3043 3724 2.362397 TGCGAGGTTGGCAAATTTAACA 59.638 40.909 0.00 0.00 37.49 2.41
3044 3725 2.729360 GTGCGAGGTTGGCAAATTTAAC 59.271 45.455 0.00 0.00 42.92 2.01
3045 3726 2.288518 GGTGCGAGGTTGGCAAATTTAA 60.289 45.455 0.00 0.00 42.92 1.52
3046 3727 1.271102 GGTGCGAGGTTGGCAAATTTA 59.729 47.619 0.00 0.00 42.92 1.40
3047 3728 0.033366 GGTGCGAGGTTGGCAAATTT 59.967 50.000 0.00 0.00 42.92 1.82
3048 3729 1.112315 TGGTGCGAGGTTGGCAAATT 61.112 50.000 0.00 0.00 42.92 1.82
3049 3730 1.112315 TTGGTGCGAGGTTGGCAAAT 61.112 50.000 0.00 0.00 42.92 2.32
3050 3731 1.323271 TTTGGTGCGAGGTTGGCAAA 61.323 50.000 0.00 0.00 42.92 3.68
3051 3732 1.323271 TTTTGGTGCGAGGTTGGCAA 61.323 50.000 0.00 0.00 42.92 4.52
3052 3733 1.112315 ATTTTGGTGCGAGGTTGGCA 61.112 50.000 0.00 0.00 38.25 4.92
3053 3734 0.885196 TATTTTGGTGCGAGGTTGGC 59.115 50.000 0.00 0.00 0.00 4.52
3054 3735 3.651803 TTTATTTTGGTGCGAGGTTGG 57.348 42.857 0.00 0.00 0.00 3.77
3055 3736 5.914746 CAAATTTATTTTGGTGCGAGGTTG 58.085 37.500 0.00 0.00 40.90 3.77
3074 3755 8.846607 GCAAATCGAATACTTTTTACGACAAAT 58.153 29.630 0.00 0.00 35.91 2.32
3075 3756 7.324135 GGCAAATCGAATACTTTTTACGACAAA 59.676 33.333 0.00 0.00 35.91 2.83
3076 3757 6.797995 GGCAAATCGAATACTTTTTACGACAA 59.202 34.615 0.00 0.00 35.91 3.18
3077 3758 6.073167 TGGCAAATCGAATACTTTTTACGACA 60.073 34.615 0.00 0.00 35.91 4.35
3078 3759 6.308675 TGGCAAATCGAATACTTTTTACGAC 58.691 36.000 0.00 0.00 35.91 4.34
3079 3760 6.483385 TGGCAAATCGAATACTTTTTACGA 57.517 33.333 0.00 0.00 37.39 3.43
3080 3761 6.291060 GCATGGCAAATCGAATACTTTTTACG 60.291 38.462 0.00 0.00 0.00 3.18
3081 3762 6.751888 AGCATGGCAAATCGAATACTTTTTAC 59.248 34.615 0.00 0.00 0.00 2.01
3082 3763 6.862209 AGCATGGCAAATCGAATACTTTTTA 58.138 32.000 0.00 0.00 0.00 1.52
3083 3764 5.723295 AGCATGGCAAATCGAATACTTTTT 58.277 33.333 0.00 0.00 0.00 1.94
3084 3765 5.329035 AGCATGGCAAATCGAATACTTTT 57.671 34.783 0.00 0.00 0.00 2.27
3085 3766 4.989279 AGCATGGCAAATCGAATACTTT 57.011 36.364 0.00 0.00 0.00 2.66
3086 3767 4.989279 AAGCATGGCAAATCGAATACTT 57.011 36.364 0.00 0.00 0.00 2.24
3087 3768 6.449635 TTTAAGCATGGCAAATCGAATACT 57.550 33.333 0.00 0.00 0.00 2.12
3088 3769 7.698836 ATTTTAAGCATGGCAAATCGAATAC 57.301 32.000 0.00 0.00 0.00 1.89
3089 3770 8.602328 CAAATTTTAAGCATGGCAAATCGAATA 58.398 29.630 0.00 0.00 0.00 1.75
3090 3771 7.414319 CCAAATTTTAAGCATGGCAAATCGAAT 60.414 33.333 0.00 0.00 0.00 3.34
3091 3772 6.128336 CCAAATTTTAAGCATGGCAAATCGAA 60.128 34.615 0.00 0.00 0.00 3.71
3092 3773 5.350914 CCAAATTTTAAGCATGGCAAATCGA 59.649 36.000 0.00 0.00 0.00 3.59
3093 3774 5.561993 CCAAATTTTAAGCATGGCAAATCG 58.438 37.500 0.00 0.00 0.00 3.34
3100 3781 2.929398 GACGGCCAAATTTTAAGCATGG 59.071 45.455 2.24 0.00 0.00 3.66
3101 3782 2.598192 CGACGGCCAAATTTTAAGCATG 59.402 45.455 2.24 0.00 0.00 4.06
3102 3783 2.416701 CCGACGGCCAAATTTTAAGCAT 60.417 45.455 2.24 0.00 0.00 3.79
3103 3784 1.068194 CCGACGGCCAAATTTTAAGCA 60.068 47.619 2.24 0.00 0.00 3.91
3104 3785 1.200484 TCCGACGGCCAAATTTTAAGC 59.800 47.619 9.66 0.00 0.00 3.09
3105 3786 3.775661 ATCCGACGGCCAAATTTTAAG 57.224 42.857 9.66 0.00 0.00 1.85
3106 3787 4.522722 AAATCCGACGGCCAAATTTTAA 57.477 36.364 9.66 0.00 0.00 1.52
3107 3788 4.522722 AAAATCCGACGGCCAAATTTTA 57.477 36.364 17.64 0.00 30.10 1.52
3108 3789 3.394674 AAAATCCGACGGCCAAATTTT 57.605 38.095 9.66 12.97 0.00 1.82
3109 3790 3.394674 AAAAATCCGACGGCCAAATTT 57.605 38.095 9.66 7.23 0.00 1.82
3159 3840 5.643348 TCCACTTGACAATATAAGCTGTGTG 59.357 40.000 0.00 0.00 0.00 3.82
3160 3841 5.804639 TCCACTTGACAATATAAGCTGTGT 58.195 37.500 0.00 0.00 0.00 3.72
3166 3847 7.223582 CACAGTAGCTCCACTTGACAATATAAG 59.776 40.741 0.00 0.00 0.00 1.73
3170 3851 4.526650 TCACAGTAGCTCCACTTGACAATA 59.473 41.667 0.00 0.00 0.00 1.90
3174 3855 2.035961 TGTCACAGTAGCTCCACTTGAC 59.964 50.000 16.71 16.71 37.24 3.18
3175 3856 2.035961 GTGTCACAGTAGCTCCACTTGA 59.964 50.000 0.00 0.00 0.00 3.02
3176 3857 2.036475 AGTGTCACAGTAGCTCCACTTG 59.964 50.000 5.62 0.00 29.32 3.16
3177 3858 2.036475 CAGTGTCACAGTAGCTCCACTT 59.964 50.000 5.62 0.00 31.19 3.16
3178 3859 1.615883 CAGTGTCACAGTAGCTCCACT 59.384 52.381 5.62 0.00 33.68 4.00
3179 3860 1.937108 GCAGTGTCACAGTAGCTCCAC 60.937 57.143 5.62 0.00 0.00 4.02
3180 3861 0.318441 GCAGTGTCACAGTAGCTCCA 59.682 55.000 5.62 0.00 0.00 3.86
3181 3862 0.390472 GGCAGTGTCACAGTAGCTCC 60.390 60.000 5.62 0.00 0.00 4.70
3182 3863 0.605589 AGGCAGTGTCACAGTAGCTC 59.394 55.000 5.62 0.00 0.00 4.09
3183 3864 1.051812 AAGGCAGTGTCACAGTAGCT 58.948 50.000 5.62 0.00 0.00 3.32
3184 3865 1.151668 CAAGGCAGTGTCACAGTAGC 58.848 55.000 5.62 3.67 0.00 3.58
3186 3867 3.552132 TTTCAAGGCAGTGTCACAGTA 57.448 42.857 5.62 0.00 0.00 2.74
3188 3869 2.620115 ACATTTCAAGGCAGTGTCACAG 59.380 45.455 5.62 0.00 0.00 3.66
3189 3870 2.653726 ACATTTCAAGGCAGTGTCACA 58.346 42.857 5.62 0.00 0.00 3.58
3190 3871 3.715628 AACATTTCAAGGCAGTGTCAC 57.284 42.857 0.00 0.00 0.00 3.67
3273 3957 9.907723 GAATAACTTATTCTGCACCCTGGGTGA 62.908 44.444 42.58 27.49 46.15 4.02
3274 3958 7.850027 GAATAACTTATTCTGCACCCTGGGTG 61.850 46.154 36.31 36.31 46.08 4.61
3275 3959 1.372501 ACTTATTCTGCACCCTGGGT 58.627 50.000 14.05 14.05 35.62 4.51
3276 3960 2.514458 AACTTATTCTGCACCCTGGG 57.486 50.000 12.28 12.28 0.00 4.45
3277 3961 5.757850 GAATAACTTATTCTGCACCCTGG 57.242 43.478 12.55 0.00 41.00 4.45
3285 3969 7.848201 ACCTCGGGTGAAGAATAACTTATTCTG 60.848 40.741 20.22 10.00 43.39 3.02
3286 3970 6.156429 ACCTCGGGTGAAGAATAACTTATTCT 59.844 38.462 15.62 15.62 44.74 2.40
3287 3971 6.346896 ACCTCGGGTGAAGAATAACTTATTC 58.653 40.000 12.07 12.07 38.76 1.75
3288 3972 6.309389 ACCTCGGGTGAAGAATAACTTATT 57.691 37.500 0.00 0.00 39.13 1.40
3289 3973 5.952347 ACCTCGGGTGAAGAATAACTTAT 57.048 39.130 0.00 0.00 39.13 1.73
3290 3974 6.855763 TTACCTCGGGTGAAGAATAACTTA 57.144 37.500 5.90 0.00 36.67 2.24
3291 3975 5.750352 TTACCTCGGGTGAAGAATAACTT 57.250 39.130 5.90 0.00 38.14 2.66
3292 3976 5.661759 AGATTACCTCGGGTGAAGAATAACT 59.338 40.000 5.90 0.00 36.19 2.24
3293 3977 5.915175 AGATTACCTCGGGTGAAGAATAAC 58.085 41.667 5.90 0.00 36.19 1.89
3294 3978 6.555463 AAGATTACCTCGGGTGAAGAATAA 57.445 37.500 5.90 0.00 36.19 1.40
3295 3979 6.238842 CGTAAGATTACCTCGGGTGAAGAATA 60.239 42.308 5.90 0.00 36.23 1.75
3296 3980 5.451520 CGTAAGATTACCTCGGGTGAAGAAT 60.452 44.000 5.90 0.00 36.23 2.40
3297 3981 4.142315 CGTAAGATTACCTCGGGTGAAGAA 60.142 45.833 5.90 0.00 36.23 2.52
3298 3982 3.379372 CGTAAGATTACCTCGGGTGAAGA 59.621 47.826 5.90 0.00 36.23 2.87
3299 3983 3.379372 TCGTAAGATTACCTCGGGTGAAG 59.621 47.826 5.90 0.00 45.01 3.02
3300 3984 3.355378 TCGTAAGATTACCTCGGGTGAA 58.645 45.455 5.90 0.00 45.01 3.18
3301 3985 3.003394 TCGTAAGATTACCTCGGGTGA 57.997 47.619 5.90 0.00 45.01 4.02
3760 4444 0.172578 CACACGCTATCCGGAGTCAA 59.827 55.000 11.34 0.00 42.52 3.18
3767 4451 1.518572 GGGTGTCACACGCTATCCG 60.519 63.158 17.46 0.00 42.71 4.18
3776 4460 1.135960 TGACATCTTGGGGTGTCACA 58.864 50.000 7.85 0.00 46.97 3.58
3781 4465 2.550978 GATACGTGACATCTTGGGGTG 58.449 52.381 0.00 0.00 0.00 4.61
3783 4467 1.136305 ACGATACGTGACATCTTGGGG 59.864 52.381 0.00 0.00 39.18 4.96
3787 4471 4.552355 TGTTCAACGATACGTGACATCTT 58.448 39.130 0.00 0.00 39.99 2.40
3835 4519 1.991339 CTCCCCTGCTGCATGGATCA 61.991 60.000 23.28 7.58 0.00 2.92
3894 4578 2.100584 CAGCTTGTCTCTACCTGGCTAG 59.899 54.545 0.00 0.00 0.00 3.42
4104 4790 2.609459 GTGACAACTGACAAGAGTGTGG 59.391 50.000 0.00 0.00 38.41 4.17
4136 4823 0.604578 GCCCGGCCGTTACATCTATA 59.395 55.000 26.12 0.00 0.00 1.31
4213 4903 8.974060 TCCTCTAAAAGCTCAAAGTTTTCTTA 57.026 30.769 0.00 0.00 39.48 2.10
4221 4911 4.143009 GCTCGTTCCTCTAAAAGCTCAAAG 60.143 45.833 0.00 0.00 0.00 2.77
4498 5194 1.133407 GAGATGGATAGATCGACGGGC 59.867 57.143 0.00 0.00 0.00 6.13
5546 6248 2.096119 CACGGGCCTTTTAGTTTACGTG 60.096 50.000 0.84 6.05 43.20 4.49
5599 6304 1.009675 ACTGAACAGCAAAAGCGCG 60.010 52.632 0.00 0.00 36.85 6.86
5618 6323 7.013529 AGTTCGTTGATTAATTCGTAAACTGC 58.986 34.615 11.15 0.00 0.00 4.40
5730 6435 2.257894 CAGCAGAGCAACTAAGAGACG 58.742 52.381 0.00 0.00 0.00 4.18
5828 6545 3.199946 CCTTCCAGGTGCTATGGTTAGAA 59.800 47.826 2.95 0.00 39.01 2.10
5829 6546 2.771943 CCTTCCAGGTGCTATGGTTAGA 59.228 50.000 2.95 0.00 39.01 2.10
5830 6547 2.771943 TCCTTCCAGGTGCTATGGTTAG 59.228 50.000 2.95 2.82 39.01 2.34
5831 6548 2.771943 CTCCTTCCAGGTGCTATGGTTA 59.228 50.000 2.95 0.00 39.01 2.85
5832 6549 1.561542 CTCCTTCCAGGTGCTATGGTT 59.438 52.381 2.95 0.00 39.01 3.67
5833 6550 1.207791 CTCCTTCCAGGTGCTATGGT 58.792 55.000 2.95 0.00 39.01 3.55
5834 6551 1.207791 ACTCCTTCCAGGTGCTATGG 58.792 55.000 0.00 0.00 36.53 2.74
5835 6552 2.766263 TGTACTCCTTCCAGGTGCTATG 59.234 50.000 0.00 0.00 36.53 2.23
5836 6553 3.116096 TGTACTCCTTCCAGGTGCTAT 57.884 47.619 0.00 0.00 36.53 2.97
5837 6554 2.615986 TGTACTCCTTCCAGGTGCTA 57.384 50.000 0.00 0.00 36.53 3.49
5838 6555 1.729586 TTGTACTCCTTCCAGGTGCT 58.270 50.000 0.00 0.00 36.53 4.40
5839 6556 2.152016 GTTTGTACTCCTTCCAGGTGC 58.848 52.381 0.00 0.00 36.53 5.01
5840 6557 2.413837 CGTTTGTACTCCTTCCAGGTG 58.586 52.381 0.00 0.00 36.53 4.00
5841 6558 1.270678 GCGTTTGTACTCCTTCCAGGT 60.271 52.381 0.00 0.00 36.53 4.00
5842 6559 1.439679 GCGTTTGTACTCCTTCCAGG 58.560 55.000 0.00 0.00 36.46 4.45
5843 6560 1.439679 GGCGTTTGTACTCCTTCCAG 58.560 55.000 0.00 0.00 0.00 3.86
5844 6561 0.320073 CGGCGTTTGTACTCCTTCCA 60.320 55.000 0.00 0.00 0.00 3.53
5845 6562 0.037975 TCGGCGTTTGTACTCCTTCC 60.038 55.000 6.85 0.00 0.00 3.46
5846 6563 1.347320 CTCGGCGTTTGTACTCCTTC 58.653 55.000 6.85 0.00 0.00 3.46
5847 6564 0.669625 GCTCGGCGTTTGTACTCCTT 60.670 55.000 6.85 0.00 0.00 3.36
5848 6565 1.080025 GCTCGGCGTTTGTACTCCT 60.080 57.895 6.85 0.00 0.00 3.69
5849 6566 0.739813 ATGCTCGGCGTTTGTACTCC 60.740 55.000 6.85 0.00 0.00 3.85
5850 6567 0.645868 GATGCTCGGCGTTTGTACTC 59.354 55.000 6.85 0.00 0.00 2.59
5851 6568 0.739813 GGATGCTCGGCGTTTGTACT 60.740 55.000 6.85 0.00 0.00 2.73
5852 6569 1.017177 TGGATGCTCGGCGTTTGTAC 61.017 55.000 6.85 0.00 0.00 2.90
5853 6570 0.739462 CTGGATGCTCGGCGTTTGTA 60.739 55.000 6.85 0.00 0.00 2.41
5854 6571 2.031919 TGGATGCTCGGCGTTTGT 59.968 55.556 6.85 0.00 0.00 2.83
5855 6572 2.753966 CCTGGATGCTCGGCGTTTG 61.754 63.158 6.85 0.00 0.00 2.93
5856 6573 2.436646 CCTGGATGCTCGGCGTTT 60.437 61.111 6.85 0.00 0.00 3.60
5857 6574 3.706373 ACCTGGATGCTCGGCGTT 61.706 61.111 6.85 0.00 0.00 4.84
5858 6575 4.457496 CACCTGGATGCTCGGCGT 62.457 66.667 6.85 0.00 0.00 5.68
5859 6576 3.664025 TTCACCTGGATGCTCGGCG 62.664 63.158 0.00 0.00 0.00 6.46
5860 6577 1.817099 CTTCACCTGGATGCTCGGC 60.817 63.158 0.00 0.00 0.00 5.54
5861 6578 0.742281 CACTTCACCTGGATGCTCGG 60.742 60.000 0.00 0.00 0.00 4.63
5862 6579 0.247460 TCACTTCACCTGGATGCTCG 59.753 55.000 0.00 0.00 0.00 5.03
5873 6590 1.669211 GGTCGGCAGTACTCACTTCAC 60.669 57.143 0.00 0.00 30.46 3.18
5874 6591 0.601558 GGTCGGCAGTACTCACTTCA 59.398 55.000 0.00 0.00 30.46 3.02
5902 6619 3.658757 ACCATTTTGTTCACGGATTGG 57.341 42.857 0.00 0.00 0.00 3.16
5903 6620 5.049060 TGTCTACCATTTTGTTCACGGATTG 60.049 40.000 0.00 0.00 0.00 2.67
5958 6675 3.557595 GCCTACCATTTTGATCTCAGTCG 59.442 47.826 0.00 0.00 0.00 4.18
5961 6678 3.889815 TGGCCTACCATTTTGATCTCAG 58.110 45.455 3.32 0.00 42.67 3.35
6021 6738 2.561733 TGCTCTAATTCAGTCGGTCG 57.438 50.000 0.00 0.00 0.00 4.79
6022 6739 4.047822 CAGATGCTCTAATTCAGTCGGTC 58.952 47.826 0.00 0.00 0.00 4.79
6071 6788 0.595567 GCGCGTCCGTGGACATATAA 60.596 55.000 18.54 0.00 44.77 0.98
6113 6832 1.822990 GACATACGAGAGGTGGTCCAA 59.177 52.381 0.00 0.00 35.89 3.53
6349 7085 5.695363 GCATCAGAATCTTCGAGATCATCAA 59.305 40.000 0.00 0.00 32.89 2.57
6419 7155 2.304761 ACGCCTGGAGATAAAGTCCAAA 59.695 45.455 3.87 0.00 43.68 3.28
6429 7166 3.420893 TGATTTTGAAACGCCTGGAGAT 58.579 40.909 3.87 0.00 0.00 2.75
6461 7204 2.025981 TGTCAAGGATGAAGGTGATGGG 60.026 50.000 0.00 0.00 37.30 4.00
6470 7213 7.118060 TCCACAATATGATTGTCAAGGATGAA 58.882 34.615 1.85 0.00 37.30 2.57
6502 7252 2.703416 TGTGGAAGCTGATGACATGTC 58.297 47.619 19.27 19.27 0.00 3.06
6574 7324 4.287067 AGAGGGTATTCAGAGTGCTTCAAA 59.713 41.667 0.00 0.00 0.00 2.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.