Multiple sequence alignment - TraesCS4D01G226900

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G226900 chr4D 100.000 2652 0 0 1 2652 386120856 386123507 0.000000e+00 4898.0
1 TraesCS4D01G226900 chr4D 91.589 214 17 1 557 770 87544035 87544247 7.180000e-76 294.0
2 TraesCS4D01G226900 chr4A 92.035 791 19 8 767 1537 67297453 67298219 0.000000e+00 1072.0
3 TraesCS4D01G226900 chr4A 91.290 597 27 10 1535 2113 67298260 67298849 0.000000e+00 791.0
4 TraesCS4D01G226900 chr4A 96.610 118 4 0 440 557 67297326 67297443 2.080000e-46 196.0
5 TraesCS4D01G226900 chr4B 92.558 739 23 7 810 1537 472671846 472672563 0.000000e+00 1031.0
6 TraesCS4D01G226900 chr4B 92.561 578 33 6 1535 2108 472672605 472673176 0.000000e+00 821.0
7 TraesCS4D01G226900 chr4B 82.805 820 76 24 767 1533 472640515 472641322 0.000000e+00 673.0
8 TraesCS4D01G226900 chr4B 99.160 119 1 0 440 558 472671684 472671802 5.750000e-52 215.0
9 TraesCS4D01G226900 chr5D 95.404 544 22 2 2110 2652 529804433 529803892 0.000000e+00 863.0
10 TraesCS4D01G226900 chr5D 94.333 547 25 4 2112 2652 539996112 539996658 0.000000e+00 833.0
11 TraesCS4D01G226900 chr5D 94.139 546 29 1 2110 2652 267620251 267620796 0.000000e+00 828.0
12 TraesCS4D01G226900 chr5D 93.566 544 32 2 2110 2652 84382309 84381768 0.000000e+00 808.0
13 TraesCS4D01G226900 chr5D 88.987 227 23 2 555 779 164651515 164651741 2.010000e-71 279.0
14 TraesCS4D01G226900 chr5D 90.000 50 5 0 391 440 182925369 182925418 6.130000e-07 65.8
15 TraesCS4D01G226900 chr6B 95.028 543 22 4 2112 2652 545609492 545608953 0.000000e+00 848.0
16 TraesCS4D01G226900 chr1D 94.322 546 27 2 2110 2652 470206818 470207362 0.000000e+00 833.0
17 TraesCS4D01G226900 chr1D 87.931 58 4 3 391 446 28626878 28626934 6.130000e-07 65.8
18 TraesCS4D01G226900 chr3D 94.301 544 30 1 2110 2652 80220422 80219879 0.000000e+00 832.0
19 TraesCS4D01G226900 chr3D 94.280 542 30 1 2112 2652 602047884 602048425 0.000000e+00 828.0
20 TraesCS4D01G226900 chrUn 93.761 545 28 3 2109 2652 20486132 20485593 0.000000e+00 813.0
21 TraesCS4D01G226900 chrUn 91.121 214 19 0 557 770 325729294 325729081 9.290000e-75 291.0
22 TraesCS4D01G226900 chrUn 91.121 214 19 0 557 770 334359748 334359961 9.290000e-75 291.0
23 TraesCS4D01G226900 chrUn 85.542 83 9 2 358 440 10360084 10360005 1.690000e-12 84.2
24 TraesCS4D01G226900 chrUn 85.542 83 9 2 358 440 222283554 222283475 1.690000e-12 84.2
25 TraesCS4D01G226900 chrUn 74.274 241 43 15 204 440 239192803 239193028 1.690000e-12 84.2
26 TraesCS4D01G226900 chrUn 96.970 33 1 0 408 440 89765901 89765933 3.690000e-04 56.5
27 TraesCS4D01G226900 chr2B 88.706 425 41 6 16 440 259310882 259311299 1.820000e-141 512.0
28 TraesCS4D01G226900 chr3B 90.351 342 28 4 99 440 160793195 160793531 6.740000e-121 444.0
29 TraesCS4D01G226900 chr7B 91.589 214 18 0 557 770 706059351 706059564 2.000000e-76 296.0
30 TraesCS4D01G226900 chr7B 89.305 187 19 1 13 199 380704028 380703843 1.590000e-57 233.0
31 TraesCS4D01G226900 chr7B 87.671 146 14 2 15 156 638134176 638134031 1.630000e-37 167.0
32 TraesCS4D01G226900 chr7B 98.039 51 1 0 214 264 380701449 380701399 3.640000e-14 89.8
33 TraesCS4D01G226900 chr7B 93.617 47 3 0 110 156 638135382 638135336 1.320000e-08 71.3
34 TraesCS4D01G226900 chr2D 91.589 214 18 0 557 770 559221307 559221094 2.000000e-76 296.0
35 TraesCS4D01G226900 chr7D 90.783 217 20 0 554 770 578394687 578394903 9.290000e-75 291.0
36 TraesCS4D01G226900 chr7D 85.987 157 9 6 13 156 575954992 575954836 3.530000e-34 156.0
37 TraesCS4D01G226900 chr2A 91.121 214 19 0 557 770 753534059 753533846 9.290000e-75 291.0
38 TraesCS4D01G226900 chr2A 83.158 95 12 3 193 283 612749962 612750056 1.690000e-12 84.2
39 TraesCS4D01G226900 chr1A 91.121 214 19 0 557 770 591606499 591606712 9.290000e-75 291.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G226900 chr4D 386120856 386123507 2651 False 4898.000000 4898 100.000000 1 2652 1 chr4D.!!$F2 2651
1 TraesCS4D01G226900 chr4A 67297326 67298849 1523 False 686.333333 1072 93.311667 440 2113 3 chr4A.!!$F1 1673
2 TraesCS4D01G226900 chr4B 472671684 472673176 1492 False 689.000000 1031 94.759667 440 2108 3 chr4B.!!$F2 1668
3 TraesCS4D01G226900 chr4B 472640515 472641322 807 False 673.000000 673 82.805000 767 1533 1 chr4B.!!$F1 766
4 TraesCS4D01G226900 chr5D 529803892 529804433 541 True 863.000000 863 95.404000 2110 2652 1 chr5D.!!$R2 542
5 TraesCS4D01G226900 chr5D 539996112 539996658 546 False 833.000000 833 94.333000 2112 2652 1 chr5D.!!$F4 540
6 TraesCS4D01G226900 chr5D 267620251 267620796 545 False 828.000000 828 94.139000 2110 2652 1 chr5D.!!$F3 542
7 TraesCS4D01G226900 chr5D 84381768 84382309 541 True 808.000000 808 93.566000 2110 2652 1 chr5D.!!$R1 542
8 TraesCS4D01G226900 chr6B 545608953 545609492 539 True 848.000000 848 95.028000 2112 2652 1 chr6B.!!$R1 540
9 TraesCS4D01G226900 chr1D 470206818 470207362 544 False 833.000000 833 94.322000 2110 2652 1 chr1D.!!$F2 542
10 TraesCS4D01G226900 chr3D 80219879 80220422 543 True 832.000000 832 94.301000 2110 2652 1 chr3D.!!$R1 542
11 TraesCS4D01G226900 chr3D 602047884 602048425 541 False 828.000000 828 94.280000 2112 2652 1 chr3D.!!$F1 540
12 TraesCS4D01G226900 chrUn 20485593 20486132 539 True 813.000000 813 93.761000 2109 2652 1 chrUn.!!$R2 543

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
356 357 0.03254 AACCGACCGGCGATATTACC 59.967 55.0 17.96 0.0 44.57 2.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1947 2101 0.182775 AACCGGGAGTGCTTTGAAGT 59.817 50.0 6.32 0.0 0.0 3.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.113815 TGCGGCAAGGATGGAGGG 62.114 66.667 0.00 0.00 0.00 4.30
18 19 4.883354 GCGGCAAGGATGGAGGGG 62.883 72.222 0.00 0.00 0.00 4.79
19 20 4.195334 CGGCAAGGATGGAGGGGG 62.195 72.222 0.00 0.00 0.00 5.40
20 21 2.696125 GGCAAGGATGGAGGGGGA 60.696 66.667 0.00 0.00 0.00 4.81
21 22 2.761465 GGCAAGGATGGAGGGGGAG 61.761 68.421 0.00 0.00 0.00 4.30
22 23 2.761465 GCAAGGATGGAGGGGGAGG 61.761 68.421 0.00 0.00 0.00 4.30
23 24 2.081161 CAAGGATGGAGGGGGAGGG 61.081 68.421 0.00 0.00 0.00 4.30
24 25 3.369161 AAGGATGGAGGGGGAGGGG 62.369 68.421 0.00 0.00 0.00 4.79
25 26 4.928520 GGATGGAGGGGGAGGGGG 62.929 77.778 0.00 0.00 0.00 5.40
26 27 3.791076 GATGGAGGGGGAGGGGGA 61.791 72.222 0.00 0.00 0.00 4.81
27 28 3.309509 ATGGAGGGGGAGGGGGAA 61.310 66.667 0.00 0.00 0.00 3.97
28 29 3.369161 ATGGAGGGGGAGGGGGAAG 62.369 68.421 0.00 0.00 0.00 3.46
29 30 4.845307 GGAGGGGGAGGGGGAAGG 62.845 77.778 0.00 0.00 0.00 3.46
30 31 4.845307 GAGGGGGAGGGGGAAGGG 62.845 77.778 0.00 0.00 0.00 3.95
33 34 4.381121 GGGGAGGGGGAAGGGGAA 62.381 72.222 0.00 0.00 0.00 3.97
34 35 2.696504 GGGAGGGGGAAGGGGAAG 60.697 72.222 0.00 0.00 0.00 3.46
35 36 2.696504 GGAGGGGGAAGGGGAAGG 60.697 72.222 0.00 0.00 0.00 3.46
36 37 2.459710 GAGGGGGAAGGGGAAGGA 59.540 66.667 0.00 0.00 0.00 3.36
37 38 1.694525 GAGGGGGAAGGGGAAGGAG 60.695 68.421 0.00 0.00 0.00 3.69
38 39 3.421386 GGGGGAAGGGGAAGGAGC 61.421 72.222 0.00 0.00 0.00 4.70
39 40 2.614013 GGGGAAGGGGAAGGAGCA 60.614 66.667 0.00 0.00 0.00 4.26
40 41 2.684499 GGGGAAGGGGAAGGAGCAG 61.684 68.421 0.00 0.00 0.00 4.24
41 42 2.273776 GGAAGGGGAAGGAGCAGC 59.726 66.667 0.00 0.00 0.00 5.25
42 43 2.606587 GGAAGGGGAAGGAGCAGCA 61.607 63.158 0.00 0.00 0.00 4.41
43 44 1.077858 GAAGGGGAAGGAGCAGCAG 60.078 63.158 0.00 0.00 0.00 4.24
44 45 2.549169 GAAGGGGAAGGAGCAGCAGG 62.549 65.000 0.00 0.00 0.00 4.85
45 46 3.334054 GGGGAAGGAGCAGCAGGT 61.334 66.667 0.00 0.00 0.00 4.00
46 47 2.045536 GGGAAGGAGCAGCAGGTG 60.046 66.667 0.00 0.00 0.00 4.00
47 48 2.045536 GGAAGGAGCAGCAGGTGG 60.046 66.667 0.86 0.00 0.00 4.61
48 49 2.753029 GAAGGAGCAGCAGGTGGT 59.247 61.111 3.40 3.40 40.54 4.16
49 50 1.673665 GAAGGAGCAGCAGGTGGTG 60.674 63.158 9.50 4.77 45.58 4.17
50 51 3.201707 AAGGAGCAGCAGGTGGTGG 62.202 63.158 9.50 0.00 43.24 4.61
83 84 3.459027 CGATGGACGTGTCGGTTG 58.541 61.111 0.00 0.00 37.22 3.77
84 85 1.081041 CGATGGACGTGTCGGTTGA 60.081 57.895 0.00 0.00 37.22 3.18
85 86 1.342082 CGATGGACGTGTCGGTTGAC 61.342 60.000 0.00 0.00 45.71 3.18
93 94 3.712881 GTCGGTTGACACGGCAGC 61.713 66.667 0.00 0.00 44.82 5.25
96 97 4.980805 GGTTGACACGGCAGCGGA 62.981 66.667 7.02 0.00 0.00 5.54
97 98 3.414700 GTTGACACGGCAGCGGAG 61.415 66.667 7.02 0.94 0.00 4.63
98 99 4.680237 TTGACACGGCAGCGGAGG 62.680 66.667 7.02 1.13 0.00 4.30
100 101 4.803426 GACACGGCAGCGGAGGAG 62.803 72.222 7.02 0.00 0.00 3.69
108 109 4.488911 AGCGGAGGAGGCCAGGAT 62.489 66.667 5.01 0.00 0.00 3.24
109 110 4.247380 GCGGAGGAGGCCAGGATG 62.247 72.222 5.01 0.00 0.00 3.51
110 111 2.444706 CGGAGGAGGCCAGGATGA 60.445 66.667 5.01 0.00 39.69 2.92
111 112 2.066393 CGGAGGAGGCCAGGATGAA 61.066 63.158 5.01 0.00 39.69 2.57
112 113 1.835693 GGAGGAGGCCAGGATGAAG 59.164 63.158 5.01 0.00 39.69 3.02
113 114 0.692419 GGAGGAGGCCAGGATGAAGA 60.692 60.000 5.01 0.00 39.69 2.87
114 115 1.433121 GAGGAGGCCAGGATGAAGAT 58.567 55.000 5.01 0.00 39.69 2.40
115 116 1.347378 GAGGAGGCCAGGATGAAGATC 59.653 57.143 5.01 0.00 39.69 2.75
116 117 1.135094 GGAGGCCAGGATGAAGATCA 58.865 55.000 5.01 0.00 39.69 2.92
117 118 1.072015 GGAGGCCAGGATGAAGATCAG 59.928 57.143 5.01 0.00 39.69 2.90
118 119 1.072015 GAGGCCAGGATGAAGATCAGG 59.928 57.143 5.01 0.00 39.69 3.86
119 120 1.135094 GGCCAGGATGAAGATCAGGA 58.865 55.000 0.00 0.00 39.69 3.86
120 121 1.492176 GGCCAGGATGAAGATCAGGAA 59.508 52.381 0.00 0.00 39.69 3.36
121 122 2.486907 GGCCAGGATGAAGATCAGGAAG 60.487 54.545 0.00 0.00 39.69 3.46
122 123 2.848691 CCAGGATGAAGATCAGGAAGC 58.151 52.381 0.00 0.00 39.69 3.86
123 124 2.486907 CCAGGATGAAGATCAGGAAGCC 60.487 54.545 0.00 0.00 39.69 4.35
124 125 1.773653 AGGATGAAGATCAGGAAGCCC 59.226 52.381 0.00 0.00 0.00 5.19
125 126 1.773653 GGATGAAGATCAGGAAGCCCT 59.226 52.381 0.00 0.00 45.74 5.19
126 127 2.975489 GGATGAAGATCAGGAAGCCCTA 59.025 50.000 0.00 0.00 42.02 3.53
127 128 3.244387 GGATGAAGATCAGGAAGCCCTAC 60.244 52.174 0.00 0.00 42.02 3.18
128 129 2.832838 TGAAGATCAGGAAGCCCTACA 58.167 47.619 0.00 0.00 42.02 2.74
129 130 2.501723 TGAAGATCAGGAAGCCCTACAC 59.498 50.000 0.00 0.00 42.02 2.90
130 131 1.501582 AGATCAGGAAGCCCTACACC 58.498 55.000 0.00 0.00 42.02 4.16
131 132 1.204146 GATCAGGAAGCCCTACACCA 58.796 55.000 0.00 0.00 42.02 4.17
132 133 1.771255 GATCAGGAAGCCCTACACCAT 59.229 52.381 0.00 0.00 42.02 3.55
133 134 1.204146 TCAGGAAGCCCTACACCATC 58.796 55.000 0.00 0.00 42.02 3.51
134 135 0.911769 CAGGAAGCCCTACACCATCA 59.088 55.000 0.00 0.00 42.02 3.07
135 136 0.912486 AGGAAGCCCTACACCATCAC 59.088 55.000 0.00 0.00 42.15 3.06
136 137 0.107165 GGAAGCCCTACACCATCACC 60.107 60.000 0.00 0.00 0.00 4.02
137 138 0.618458 GAAGCCCTACACCATCACCA 59.382 55.000 0.00 0.00 0.00 4.17
138 139 1.004277 GAAGCCCTACACCATCACCAA 59.996 52.381 0.00 0.00 0.00 3.67
139 140 0.620556 AGCCCTACACCATCACCAAG 59.379 55.000 0.00 0.00 0.00 3.61
140 141 0.328258 GCCCTACACCATCACCAAGT 59.672 55.000 0.00 0.00 0.00 3.16
141 142 1.679032 GCCCTACACCATCACCAAGTC 60.679 57.143 0.00 0.00 0.00 3.01
142 143 1.065418 CCCTACACCATCACCAAGTCC 60.065 57.143 0.00 0.00 0.00 3.85
143 144 1.628340 CCTACACCATCACCAAGTCCA 59.372 52.381 0.00 0.00 0.00 4.02
144 145 2.355108 CCTACACCATCACCAAGTCCAG 60.355 54.545 0.00 0.00 0.00 3.86
145 146 0.401738 ACACCATCACCAAGTCCAGG 59.598 55.000 0.00 0.00 0.00 4.45
146 147 0.322816 CACCATCACCAAGTCCAGGG 60.323 60.000 0.00 0.00 0.00 4.45
147 148 0.475632 ACCATCACCAAGTCCAGGGA 60.476 55.000 0.00 0.00 0.00 4.20
148 149 0.254178 CCATCACCAAGTCCAGGGAG 59.746 60.000 0.00 0.00 0.00 4.30
149 150 1.279496 CATCACCAAGTCCAGGGAGA 58.721 55.000 0.00 0.00 0.00 3.71
150 151 1.209019 CATCACCAAGTCCAGGGAGAG 59.791 57.143 0.00 0.00 0.00 3.20
151 152 1.194781 TCACCAAGTCCAGGGAGAGC 61.195 60.000 0.00 0.00 0.00 4.09
152 153 1.159664 ACCAAGTCCAGGGAGAGCT 59.840 57.895 0.00 0.00 0.00 4.09
153 154 1.197430 ACCAAGTCCAGGGAGAGCTG 61.197 60.000 0.00 0.00 0.00 4.24
154 155 1.601171 CAAGTCCAGGGAGAGCTGG 59.399 63.158 0.00 0.00 41.85 4.85
155 156 0.906756 CAAGTCCAGGGAGAGCTGGA 60.907 60.000 0.00 0.00 46.39 3.86
158 159 2.922162 TCCAGGGAGAGCTGGATTC 58.078 57.895 0.00 0.00 44.02 2.52
159 160 1.045350 TCCAGGGAGAGCTGGATTCG 61.045 60.000 0.00 0.00 44.02 3.34
160 161 1.045350 CCAGGGAGAGCTGGATTCGA 61.045 60.000 0.00 0.00 43.08 3.71
161 162 0.388659 CAGGGAGAGCTGGATTCGAG 59.611 60.000 0.00 0.00 0.00 4.04
162 163 0.260230 AGGGAGAGCTGGATTCGAGA 59.740 55.000 0.00 0.00 0.00 4.04
163 164 1.115467 GGGAGAGCTGGATTCGAGAA 58.885 55.000 0.00 0.00 0.00 2.87
164 165 1.202475 GGGAGAGCTGGATTCGAGAAC 60.202 57.143 0.00 0.00 0.00 3.01
165 166 1.535015 GGAGAGCTGGATTCGAGAACG 60.535 57.143 0.00 0.00 41.26 3.95
166 167 0.457851 AGAGCTGGATTCGAGAACGG 59.542 55.000 0.00 0.00 40.21 4.44
167 168 0.528684 GAGCTGGATTCGAGAACGGG 60.529 60.000 0.00 0.00 40.21 5.28
168 169 1.521681 GCTGGATTCGAGAACGGGG 60.522 63.158 0.00 0.00 40.21 5.73
169 170 1.956629 GCTGGATTCGAGAACGGGGA 61.957 60.000 0.00 0.00 40.21 4.81
170 171 0.535335 CTGGATTCGAGAACGGGGAA 59.465 55.000 0.00 0.00 40.21 3.97
171 172 0.535335 TGGATTCGAGAACGGGGAAG 59.465 55.000 0.00 0.00 40.21 3.46
172 173 0.179081 GGATTCGAGAACGGGGAAGG 60.179 60.000 0.00 0.00 40.21 3.46
173 174 0.822164 GATTCGAGAACGGGGAAGGA 59.178 55.000 0.00 0.00 40.21 3.36
174 175 1.206371 GATTCGAGAACGGGGAAGGAA 59.794 52.381 0.00 0.00 40.21 3.36
175 176 0.606604 TTCGAGAACGGGGAAGGAAG 59.393 55.000 0.00 0.00 40.21 3.46
176 177 1.218316 CGAGAACGGGGAAGGAAGG 59.782 63.158 0.00 0.00 35.72 3.46
177 178 1.602771 GAGAACGGGGAAGGAAGGG 59.397 63.158 0.00 0.00 0.00 3.95
178 179 0.908180 GAGAACGGGGAAGGAAGGGA 60.908 60.000 0.00 0.00 0.00 4.20
179 180 1.199425 AGAACGGGGAAGGAAGGGAC 61.199 60.000 0.00 0.00 0.00 4.46
180 181 2.517484 GAACGGGGAAGGAAGGGACG 62.517 65.000 0.00 0.00 0.00 4.79
181 182 3.001406 CGGGGAAGGAAGGGACGT 61.001 66.667 0.00 0.00 0.00 4.34
182 183 2.669240 GGGGAAGGAAGGGACGTG 59.331 66.667 0.00 0.00 0.00 4.49
183 184 1.916777 GGGGAAGGAAGGGACGTGA 60.917 63.158 0.00 0.00 0.00 4.35
184 185 1.272554 GGGGAAGGAAGGGACGTGAT 61.273 60.000 0.00 0.00 0.00 3.06
185 186 0.178301 GGGAAGGAAGGGACGTGATC 59.822 60.000 0.00 0.00 0.00 2.92
186 187 0.902531 GGAAGGAAGGGACGTGATCA 59.097 55.000 0.00 0.00 0.00 2.92
187 188 1.405661 GGAAGGAAGGGACGTGATCAC 60.406 57.143 16.21 16.21 0.00 3.06
201 202 4.035278 GTGATCACGTAAGAGAAGGAGG 57.965 50.000 10.69 0.00 41.21 4.30
202 203 3.024547 TGATCACGTAAGAGAAGGAGGG 58.975 50.000 0.00 0.00 41.21 4.30
203 204 2.599408 TCACGTAAGAGAAGGAGGGT 57.401 50.000 0.00 0.00 43.62 4.34
204 205 2.168496 TCACGTAAGAGAAGGAGGGTG 58.832 52.381 0.00 0.00 43.62 4.61
205 206 0.896226 ACGTAAGAGAAGGAGGGTGC 59.104 55.000 0.00 0.00 43.62 5.01
206 207 0.179134 CGTAAGAGAAGGAGGGTGCG 60.179 60.000 0.00 0.00 43.02 5.34
207 208 0.175989 GTAAGAGAAGGAGGGTGCGG 59.824 60.000 0.00 0.00 0.00 5.69
208 209 0.040646 TAAGAGAAGGAGGGTGCGGA 59.959 55.000 0.00 0.00 0.00 5.54
209 210 1.261238 AAGAGAAGGAGGGTGCGGAG 61.261 60.000 0.00 0.00 0.00 4.63
227 228 3.224230 CCTGCAGCAGCTAGGCTA 58.776 61.111 17.81 0.00 43.68 3.93
228 229 1.069427 CCTGCAGCAGCTAGGCTAG 59.931 63.158 17.81 17.33 43.68 3.42
254 255 3.799755 GCAAACCCTAGCGTGGCG 61.800 66.667 0.00 0.00 0.00 5.69
255 256 3.124921 CAAACCCTAGCGTGGCGG 61.125 66.667 0.00 0.00 0.00 6.13
267 268 4.257654 TGGCGGCGGTTGGAAGAA 62.258 61.111 9.78 0.00 0.00 2.52
268 269 3.431725 GGCGGCGGTTGGAAGAAG 61.432 66.667 9.78 0.00 0.00 2.85
269 270 2.358247 GCGGCGGTTGGAAGAAGA 60.358 61.111 9.78 0.00 0.00 2.87
270 271 2.391389 GCGGCGGTTGGAAGAAGAG 61.391 63.158 9.78 0.00 0.00 2.85
271 272 1.292223 CGGCGGTTGGAAGAAGAGA 59.708 57.895 0.00 0.00 0.00 3.10
272 273 0.320421 CGGCGGTTGGAAGAAGAGAA 60.320 55.000 0.00 0.00 0.00 2.87
273 274 1.443802 GGCGGTTGGAAGAAGAGAAG 58.556 55.000 0.00 0.00 0.00 2.85
274 275 1.443802 GCGGTTGGAAGAAGAGAAGG 58.556 55.000 0.00 0.00 0.00 3.46
275 276 1.946283 GCGGTTGGAAGAAGAGAAGGG 60.946 57.143 0.00 0.00 0.00 3.95
276 277 1.623811 CGGTTGGAAGAAGAGAAGGGA 59.376 52.381 0.00 0.00 0.00 4.20
277 278 2.354203 CGGTTGGAAGAAGAGAAGGGAG 60.354 54.545 0.00 0.00 0.00 4.30
278 279 2.907042 GGTTGGAAGAAGAGAAGGGAGA 59.093 50.000 0.00 0.00 0.00 3.71
279 280 3.521531 GGTTGGAAGAAGAGAAGGGAGAT 59.478 47.826 0.00 0.00 0.00 2.75
280 281 4.512484 GTTGGAAGAAGAGAAGGGAGATG 58.488 47.826 0.00 0.00 0.00 2.90
281 282 3.110705 TGGAAGAAGAGAAGGGAGATGG 58.889 50.000 0.00 0.00 0.00 3.51
282 283 2.437651 GGAAGAAGAGAAGGGAGATGGG 59.562 54.545 0.00 0.00 0.00 4.00
283 284 3.379452 GAAGAAGAGAAGGGAGATGGGA 58.621 50.000 0.00 0.00 0.00 4.37
284 285 3.498614 AGAAGAGAAGGGAGATGGGAA 57.501 47.619 0.00 0.00 0.00 3.97
285 286 3.383223 AGAAGAGAAGGGAGATGGGAAG 58.617 50.000 0.00 0.00 0.00 3.46
286 287 2.188818 AGAGAAGGGAGATGGGAAGG 57.811 55.000 0.00 0.00 0.00 3.46
287 288 1.367848 AGAGAAGGGAGATGGGAAGGT 59.632 52.381 0.00 0.00 0.00 3.50
288 289 1.488393 GAGAAGGGAGATGGGAAGGTG 59.512 57.143 0.00 0.00 0.00 4.00
289 290 0.548510 GAAGGGAGATGGGAAGGTGG 59.451 60.000 0.00 0.00 0.00 4.61
290 291 0.121197 AAGGGAGATGGGAAGGTGGA 59.879 55.000 0.00 0.00 0.00 4.02
291 292 0.327000 AGGGAGATGGGAAGGTGGAG 60.327 60.000 0.00 0.00 0.00 3.86
292 293 0.326618 GGGAGATGGGAAGGTGGAGA 60.327 60.000 0.00 0.00 0.00 3.71
293 294 0.833949 GGAGATGGGAAGGTGGAGAC 59.166 60.000 0.00 0.00 0.00 3.36
294 295 0.461961 GAGATGGGAAGGTGGAGACG 59.538 60.000 0.00 0.00 0.00 4.18
295 296 0.978146 AGATGGGAAGGTGGAGACGG 60.978 60.000 0.00 0.00 0.00 4.79
296 297 1.972660 GATGGGAAGGTGGAGACGGG 61.973 65.000 0.00 0.00 0.00 5.28
297 298 2.284405 GGGAAGGTGGAGACGGGA 60.284 66.667 0.00 0.00 0.00 5.14
298 299 1.916777 GGGAAGGTGGAGACGGGAA 60.917 63.158 0.00 0.00 0.00 3.97
299 300 1.597461 GGAAGGTGGAGACGGGAAG 59.403 63.158 0.00 0.00 0.00 3.46
300 301 1.079057 GAAGGTGGAGACGGGAAGC 60.079 63.158 0.00 0.00 0.00 3.86
301 302 1.536662 AAGGTGGAGACGGGAAGCT 60.537 57.895 0.00 0.00 0.00 3.74
302 303 1.831652 AAGGTGGAGACGGGAAGCTG 61.832 60.000 0.00 0.00 0.00 4.24
303 304 2.266055 GTGGAGACGGGAAGCTGG 59.734 66.667 0.00 0.00 0.00 4.85
304 305 3.003173 TGGAGACGGGAAGCTGGG 61.003 66.667 0.00 0.00 0.00 4.45
305 306 2.683933 GGAGACGGGAAGCTGGGA 60.684 66.667 0.00 0.00 0.00 4.37
306 307 2.066999 GGAGACGGGAAGCTGGGAT 61.067 63.158 0.00 0.00 0.00 3.85
307 308 0.759436 GGAGACGGGAAGCTGGGATA 60.759 60.000 0.00 0.00 0.00 2.59
308 309 0.389757 GAGACGGGAAGCTGGGATAC 59.610 60.000 0.00 0.00 0.00 2.24
309 310 1.067582 GACGGGAAGCTGGGATACG 59.932 63.158 0.00 0.00 37.60 3.06
310 311 2.365095 GACGGGAAGCTGGGATACGG 62.365 65.000 0.00 0.00 37.60 4.02
311 312 2.829592 GGGAAGCTGGGATACGGG 59.170 66.667 0.00 0.00 37.60 5.28
312 313 2.111251 GGAAGCTGGGATACGGGC 59.889 66.667 0.00 0.00 37.60 6.13
313 314 2.444256 GGAAGCTGGGATACGGGCT 61.444 63.158 0.00 0.00 44.81 5.19
314 315 3.741325 AAGCTGGGATACGGGCTT 58.259 55.556 0.84 0.84 45.60 4.35
315 316 2.911143 AGCTGGGATACGGGCTTG 59.089 61.111 0.00 0.00 41.18 4.01
316 317 2.203209 GCTGGGATACGGGCTTGG 60.203 66.667 0.00 0.00 37.60 3.61
317 318 2.510906 CTGGGATACGGGCTTGGG 59.489 66.667 0.00 0.00 37.60 4.12
318 319 3.774599 CTGGGATACGGGCTTGGGC 62.775 68.421 0.00 0.00 35.64 5.36
328 329 4.299796 GCTTGGGCCTTGGGGTCA 62.300 66.667 4.53 0.00 39.39 4.02
329 330 2.772924 CTTGGGCCTTGGGGTCAT 59.227 61.111 4.53 0.00 39.39 3.06
330 331 2.006748 CTTGGGCCTTGGGGTCATA 58.993 57.895 4.53 0.00 39.39 2.15
331 332 0.395724 CTTGGGCCTTGGGGTCATAC 60.396 60.000 4.53 0.00 39.39 2.39
332 333 2.192175 GGGCCTTGGGGTCATACG 59.808 66.667 0.84 0.00 39.39 3.06
333 334 2.372074 GGGCCTTGGGGTCATACGA 61.372 63.158 0.84 0.00 39.39 3.43
334 335 1.605453 GGCCTTGGGGTCATACGAA 59.395 57.895 0.00 0.00 37.14 3.85
335 336 0.182775 GGCCTTGGGGTCATACGAAT 59.817 55.000 0.00 0.00 37.14 3.34
336 337 1.308998 GCCTTGGGGTCATACGAATG 58.691 55.000 0.00 0.00 34.45 2.67
337 338 1.134220 GCCTTGGGGTCATACGAATGA 60.134 52.381 0.00 0.00 39.87 2.57
338 339 2.682563 GCCTTGGGGTCATACGAATGAA 60.683 50.000 0.00 0.00 43.69 2.57
344 345 2.199236 GGTCATACGAATGAACCGACC 58.801 52.381 0.00 0.00 43.01 4.79
345 346 1.850441 GTCATACGAATGAACCGACCG 59.150 52.381 0.00 0.00 43.69 4.79
346 347 1.202325 TCATACGAATGAACCGACCGG 60.202 52.381 6.94 6.94 39.20 5.28
347 348 0.529119 ATACGAATGAACCGACCGGC 60.529 55.000 8.55 0.00 39.32 6.13
348 349 2.870667 TACGAATGAACCGACCGGCG 62.871 60.000 8.55 6.30 39.32 6.46
349 350 2.125832 GAATGAACCGACCGGCGA 60.126 61.111 17.96 0.57 44.57 5.54
350 351 1.520787 GAATGAACCGACCGGCGAT 60.521 57.895 17.96 0.00 44.57 4.58
351 352 0.249155 GAATGAACCGACCGGCGATA 60.249 55.000 17.96 3.79 44.57 2.92
352 353 0.391597 AATGAACCGACCGGCGATAT 59.608 50.000 17.96 5.29 44.57 1.63
353 354 0.391597 ATGAACCGACCGGCGATATT 59.608 50.000 17.96 9.95 44.57 1.28
354 355 1.031235 TGAACCGACCGGCGATATTA 58.969 50.000 17.96 0.60 44.57 0.98
355 356 1.269206 TGAACCGACCGGCGATATTAC 60.269 52.381 17.96 0.00 44.57 1.89
356 357 0.032540 AACCGACCGGCGATATTACC 59.967 55.000 17.96 0.00 44.57 2.85
366 367 4.448363 GGCGATATTACCGACTGAAAAC 57.552 45.455 0.00 0.00 31.20 2.43
367 368 3.246936 GGCGATATTACCGACTGAAAACC 59.753 47.826 0.00 0.00 31.20 3.27
368 369 4.117685 GCGATATTACCGACTGAAAACCT 58.882 43.478 0.00 0.00 0.00 3.50
369 370 4.025979 GCGATATTACCGACTGAAAACCTG 60.026 45.833 0.00 0.00 0.00 4.00
370 371 4.025979 CGATATTACCGACTGAAAACCTGC 60.026 45.833 0.00 0.00 0.00 4.85
371 372 2.623878 TTACCGACTGAAAACCTGCA 57.376 45.000 0.00 0.00 0.00 4.41
372 373 2.163818 TACCGACTGAAAACCTGCAG 57.836 50.000 6.78 6.78 38.10 4.41
373 374 1.166531 ACCGACTGAAAACCTGCAGC 61.167 55.000 8.66 0.00 35.57 5.25
374 375 0.886490 CCGACTGAAAACCTGCAGCT 60.886 55.000 8.66 0.00 35.57 4.24
375 376 0.236711 CGACTGAAAACCTGCAGCTG 59.763 55.000 10.11 10.11 35.57 4.24
376 377 0.039708 GACTGAAAACCTGCAGCTGC 60.040 55.000 31.89 31.89 42.50 5.25
377 378 1.288127 CTGAAAACCTGCAGCTGCC 59.712 57.895 34.64 18.16 41.18 4.85
378 379 1.455402 TGAAAACCTGCAGCTGCCA 60.455 52.632 34.64 20.59 41.18 4.92
379 380 1.288127 GAAAACCTGCAGCTGCCAG 59.712 57.895 34.64 28.01 41.18 4.85
380 381 2.151049 GAAAACCTGCAGCTGCCAGG 62.151 60.000 35.67 35.67 41.71 4.45
381 382 2.934363 AAAACCTGCAGCTGCCAGGT 62.934 55.000 36.62 36.62 46.69 4.00
382 383 4.655647 ACCTGCAGCTGCCAGGTG 62.656 66.667 39.02 25.56 44.70 4.00
384 385 4.655647 CTGCAGCTGCCAGGTGGT 62.656 66.667 34.64 0.00 43.49 4.16
385 386 4.648626 TGCAGCTGCCAGGTGGTC 62.649 66.667 34.64 9.93 43.49 4.02
387 388 4.729918 CAGCTGCCAGGTGGTCCC 62.730 72.222 16.01 0.00 39.87 4.46
389 390 4.729918 GCTGCCAGGTGGTCCCAG 62.730 72.222 0.00 0.00 37.57 4.45
390 391 4.729918 CTGCCAGGTGGTCCCAGC 62.730 72.222 7.43 7.43 43.95 4.85
392 393 4.729918 GCCAGGTGGTCCCAGCAG 62.730 72.222 17.11 9.36 45.79 4.24
393 394 4.729918 CCAGGTGGTCCCAGCAGC 62.730 72.222 17.11 4.23 45.79 5.25
394 395 4.729918 CAGGTGGTCCCAGCAGCC 62.730 72.222 17.11 0.66 44.32 4.85
401 402 3.466314 TCCCAGCAGCCGCGATTA 61.466 61.111 8.23 0.00 45.49 1.75
402 403 2.513666 CCCAGCAGCCGCGATTAA 60.514 61.111 8.23 0.00 45.49 1.40
403 404 2.709475 CCAGCAGCCGCGATTAAC 59.291 61.111 8.23 0.00 45.49 2.01
404 405 2.709475 CAGCAGCCGCGATTAACC 59.291 61.111 8.23 0.00 45.49 2.85
405 406 2.106074 CAGCAGCCGCGATTAACCA 61.106 57.895 8.23 0.00 45.49 3.67
406 407 2.106683 AGCAGCCGCGATTAACCAC 61.107 57.895 8.23 0.00 45.49 4.16
407 408 2.395360 GCAGCCGCGATTAACCACA 61.395 57.895 8.23 0.00 0.00 4.17
408 409 1.917782 GCAGCCGCGATTAACCACAA 61.918 55.000 8.23 0.00 0.00 3.33
409 410 0.732571 CAGCCGCGATTAACCACAAT 59.267 50.000 8.23 0.00 0.00 2.71
410 411 0.732571 AGCCGCGATTAACCACAATG 59.267 50.000 8.23 0.00 0.00 2.82
411 412 0.865639 GCCGCGATTAACCACAATGC 60.866 55.000 8.23 0.00 0.00 3.56
412 413 0.732571 CCGCGATTAACCACAATGCT 59.267 50.000 8.23 0.00 0.00 3.79
413 414 1.268032 CCGCGATTAACCACAATGCTC 60.268 52.381 8.23 0.00 0.00 4.26
414 415 1.268032 CGCGATTAACCACAATGCTCC 60.268 52.381 0.00 0.00 0.00 4.70
415 416 1.742831 GCGATTAACCACAATGCTCCA 59.257 47.619 0.00 0.00 0.00 3.86
416 417 2.163412 GCGATTAACCACAATGCTCCAA 59.837 45.455 0.00 0.00 0.00 3.53
417 418 3.181487 GCGATTAACCACAATGCTCCAAT 60.181 43.478 0.00 0.00 0.00 3.16
418 419 4.677779 GCGATTAACCACAATGCTCCAATT 60.678 41.667 0.00 0.00 0.00 2.32
419 420 5.036737 CGATTAACCACAATGCTCCAATTC 58.963 41.667 0.00 0.00 0.00 2.17
420 421 4.433186 TTAACCACAATGCTCCAATTCG 57.567 40.909 0.00 0.00 0.00 3.34
421 422 1.909700 ACCACAATGCTCCAATTCGT 58.090 45.000 0.00 0.00 0.00 3.85
422 423 1.541147 ACCACAATGCTCCAATTCGTG 59.459 47.619 0.00 0.00 0.00 4.35
432 433 2.403252 CCAATTCGTGGGAGCTTAGT 57.597 50.000 0.00 0.00 44.64 2.24
433 434 3.536956 CCAATTCGTGGGAGCTTAGTA 57.463 47.619 0.00 0.00 44.64 1.82
434 435 3.869065 CCAATTCGTGGGAGCTTAGTAA 58.131 45.455 0.00 0.00 44.64 2.24
435 436 3.621715 CCAATTCGTGGGAGCTTAGTAAC 59.378 47.826 0.00 0.00 44.64 2.50
436 437 4.504858 CAATTCGTGGGAGCTTAGTAACT 58.495 43.478 0.00 0.00 0.00 2.24
437 438 3.587797 TTCGTGGGAGCTTAGTAACTG 57.412 47.619 0.00 0.00 0.00 3.16
438 439 2.522185 TCGTGGGAGCTTAGTAACTGT 58.478 47.619 0.00 0.00 0.00 3.55
541 542 2.097466 CCCAATAACGAGGTGTTGATGC 59.903 50.000 0.00 0.00 42.01 3.91
560 561 7.517614 TGATGCCAACAAAAATCAACTACTA 57.482 32.000 0.00 0.00 0.00 1.82
561 562 7.367285 TGATGCCAACAAAAATCAACTACTAC 58.633 34.615 0.00 0.00 0.00 2.73
562 563 6.079424 TGCCAACAAAAATCAACTACTACC 57.921 37.500 0.00 0.00 0.00 3.18
563 564 5.594725 TGCCAACAAAAATCAACTACTACCA 59.405 36.000 0.00 0.00 0.00 3.25
565 566 6.238925 GCCAACAAAAATCAACTACTACCACT 60.239 38.462 0.00 0.00 0.00 4.00
566 567 7.360361 CCAACAAAAATCAACTACTACCACTC 58.640 38.462 0.00 0.00 0.00 3.51
567 568 7.228706 CCAACAAAAATCAACTACTACCACTCT 59.771 37.037 0.00 0.00 0.00 3.24
568 569 7.964604 ACAAAAATCAACTACTACCACTCTC 57.035 36.000 0.00 0.00 0.00 3.20
569 570 7.736893 ACAAAAATCAACTACTACCACTCTCT 58.263 34.615 0.00 0.00 0.00 3.10
570 571 7.873505 ACAAAAATCAACTACTACCACTCTCTC 59.126 37.037 0.00 0.00 0.00 3.20
571 572 7.540474 AAAATCAACTACTACCACTCTCTCA 57.460 36.000 0.00 0.00 0.00 3.27
572 573 6.767524 AATCAACTACTACCACTCTCTCAG 57.232 41.667 0.00 0.00 0.00 3.35
573 574 5.244189 TCAACTACTACCACTCTCTCAGT 57.756 43.478 0.00 0.00 34.67 3.41
574 575 5.632118 TCAACTACTACCACTCTCTCAGTT 58.368 41.667 0.00 0.00 30.26 3.16
575 576 6.069331 TCAACTACTACCACTCTCTCAGTTT 58.931 40.000 0.00 0.00 30.26 2.66
576 577 7.229308 TCAACTACTACCACTCTCTCAGTTTA 58.771 38.462 0.00 0.00 30.26 2.01
577 578 7.174599 TCAACTACTACCACTCTCTCAGTTTAC 59.825 40.741 0.00 0.00 30.26 2.01
578 579 6.540995 ACTACTACCACTCTCTCAGTTTACA 58.459 40.000 0.00 0.00 30.26 2.41
579 580 5.968528 ACTACCACTCTCTCAGTTTACAG 57.031 43.478 0.00 0.00 30.26 2.74
580 581 4.767928 ACTACCACTCTCTCAGTTTACAGG 59.232 45.833 0.00 0.00 30.26 4.00
581 582 2.900546 ACCACTCTCTCAGTTTACAGGG 59.099 50.000 0.00 0.00 30.26 4.45
582 583 2.354203 CCACTCTCTCAGTTTACAGGGC 60.354 54.545 0.00 0.00 30.26 5.19
583 584 2.300152 CACTCTCTCAGTTTACAGGGCA 59.700 50.000 0.00 0.00 30.26 5.36
584 585 3.055530 CACTCTCTCAGTTTACAGGGCAT 60.056 47.826 0.00 0.00 30.26 4.40
585 586 3.055530 ACTCTCTCAGTTTACAGGGCATG 60.056 47.826 0.00 0.00 26.56 4.06
586 587 2.012673 CTCTCAGTTTACAGGGCATGC 58.987 52.381 9.90 9.90 0.00 4.06
587 588 0.729116 CTCAGTTTACAGGGCATGCG 59.271 55.000 12.44 0.00 0.00 4.73
588 589 1.137404 CAGTTTACAGGGCATGCGC 59.863 57.895 26.04 26.04 37.44 6.09
589 590 2.100216 GTTTACAGGGCATGCGCG 59.900 61.111 26.71 22.63 39.92 6.86
590 591 2.359354 TTTACAGGGCATGCGCGT 60.359 55.556 26.71 26.25 39.92 6.01
591 592 1.079057 TTTACAGGGCATGCGCGTA 60.079 52.632 26.71 25.35 39.92 4.42
592 593 0.462937 TTTACAGGGCATGCGCGTAT 60.463 50.000 26.71 18.62 39.92 3.06
593 594 0.462937 TTACAGGGCATGCGCGTATT 60.463 50.000 26.71 15.36 39.92 1.89
594 595 0.878523 TACAGGGCATGCGCGTATTC 60.879 55.000 26.71 1.75 39.92 1.75
595 596 2.591715 AGGGCATGCGCGTATTCC 60.592 61.111 26.71 16.88 39.92 3.01
596 597 2.591715 GGGCATGCGCGTATTCCT 60.592 61.111 23.03 0.00 39.92 3.36
597 598 1.301401 GGGCATGCGCGTATTCCTA 60.301 57.895 23.03 0.00 39.92 2.94
598 599 1.291877 GGGCATGCGCGTATTCCTAG 61.292 60.000 23.03 6.47 39.92 3.02
599 600 1.291877 GGCATGCGCGTATTCCTAGG 61.292 60.000 17.75 0.82 39.92 3.02
600 601 0.600255 GCATGCGCGTATTCCTAGGT 60.600 55.000 7.06 0.00 0.00 3.08
601 602 1.419374 CATGCGCGTATTCCTAGGTC 58.581 55.000 7.06 0.00 0.00 3.85
602 603 0.039437 ATGCGCGTATTCCTAGGTCG 60.039 55.000 8.43 10.72 0.00 4.79
603 604 1.358046 GCGCGTATTCCTAGGTCGT 59.642 57.895 8.43 0.00 0.00 4.34
604 605 0.248784 GCGCGTATTCCTAGGTCGTT 60.249 55.000 8.43 0.00 0.00 3.85
605 606 1.002468 GCGCGTATTCCTAGGTCGTTA 60.002 52.381 8.43 0.00 0.00 3.18
606 607 2.541588 GCGCGTATTCCTAGGTCGTTAA 60.542 50.000 8.43 0.00 0.00 2.01
607 608 3.854784 GCGCGTATTCCTAGGTCGTTAAT 60.855 47.826 8.43 3.24 0.00 1.40
608 609 4.293415 CGCGTATTCCTAGGTCGTTAATT 58.707 43.478 9.08 0.00 0.00 1.40
609 610 4.741676 CGCGTATTCCTAGGTCGTTAATTT 59.258 41.667 9.08 0.00 0.00 1.82
610 611 5.332055 CGCGTATTCCTAGGTCGTTAATTTG 60.332 44.000 9.08 0.00 0.00 2.32
611 612 5.750067 GCGTATTCCTAGGTCGTTAATTTGA 59.250 40.000 9.08 0.00 0.00 2.69
612 613 6.292008 GCGTATTCCTAGGTCGTTAATTTGAC 60.292 42.308 9.08 0.00 0.00 3.18
681 682 7.710766 ACTACGGAGTTTCTACTTTCAAAAG 57.289 36.000 0.00 0.97 37.78 2.27
682 683 7.495055 ACTACGGAGTTTCTACTTTCAAAAGA 58.505 34.615 9.39 0.00 37.78 2.52
683 684 8.148999 ACTACGGAGTTTCTACTTTCAAAAGAT 58.851 33.333 9.39 0.00 37.78 2.40
684 685 9.635520 CTACGGAGTTTCTACTTTCAAAAGATA 57.364 33.333 9.39 0.00 37.78 1.98
749 750 9.727859 ATTAACAACTTATGTATACACACACCA 57.272 29.630 7.96 0.00 42.99 4.17
750 751 7.429636 AACAACTTATGTATACACACACCAC 57.570 36.000 7.96 0.00 42.99 4.16
751 752 6.765403 ACAACTTATGTATACACACACCACT 58.235 36.000 7.96 0.00 41.63 4.00
752 753 7.221450 ACAACTTATGTATACACACACCACTT 58.779 34.615 7.96 0.00 41.63 3.16
753 754 7.172532 ACAACTTATGTATACACACACCACTTG 59.827 37.037 7.96 4.91 41.63 3.16
754 755 6.765403 ACTTATGTATACACACACCACTTGT 58.235 36.000 7.96 0.00 37.54 3.16
755 756 7.898918 ACTTATGTATACACACACCACTTGTA 58.101 34.615 7.96 0.00 37.54 2.41
756 757 8.369424 ACTTATGTATACACACACCACTTGTAA 58.631 33.333 7.96 0.00 37.54 2.41
757 758 9.210329 CTTATGTATACACACACCACTTGTAAA 57.790 33.333 7.96 0.00 37.54 2.01
758 759 6.847956 TGTATACACACACCACTTGTAAAC 57.152 37.500 0.08 0.00 35.67 2.01
759 760 6.584488 TGTATACACACACCACTTGTAAACT 58.416 36.000 0.08 0.00 35.67 2.66
760 761 6.480651 TGTATACACACACCACTTGTAAACTG 59.519 38.462 0.08 0.00 35.67 3.16
761 762 3.945346 ACACACACCACTTGTAAACTGA 58.055 40.909 0.00 0.00 35.67 3.41
762 763 4.328536 ACACACACCACTTGTAAACTGAA 58.671 39.130 0.00 0.00 35.67 3.02
763 764 4.762765 ACACACACCACTTGTAAACTGAAA 59.237 37.500 0.00 0.00 35.67 2.69
764 765 5.092781 CACACACCACTTGTAAACTGAAAC 58.907 41.667 0.00 0.00 35.67 2.78
765 766 4.142773 ACACACCACTTGTAAACTGAAACG 60.143 41.667 0.00 0.00 35.67 3.60
772 773 3.134574 TGTAAACTGAAACGGAGGCAT 57.865 42.857 0.00 0.00 0.00 4.40
800 809 1.874299 ATTCCGCCAAATGACCCCCT 61.874 55.000 0.00 0.00 0.00 4.79
1656 1794 5.805486 CACTGCGCTTCTAGAATAAACAGTA 59.195 40.000 20.83 5.50 34.30 2.74
1721 1859 2.604914 CACTTCGCTGTGGCTTGTATAG 59.395 50.000 0.60 0.00 34.56 1.31
1775 1924 4.446719 GTGACGTCCGTCTATTTTGAAGTT 59.553 41.667 19.30 0.00 44.80 2.66
1849 2003 0.833287 TAATGAGCTGGACTCCTGGC 59.167 55.000 0.00 5.07 45.61 4.85
1859 2013 1.670949 GACTCCTGGCGATGCTGAGA 61.671 60.000 9.35 0.00 0.00 3.27
1860 2014 1.260538 ACTCCTGGCGATGCTGAGAA 61.261 55.000 9.35 0.00 0.00 2.87
1892 2046 6.486993 GGTGATCTTGGTGTACTTTTCTTCTT 59.513 38.462 0.00 0.00 0.00 2.52
1947 2101 1.405526 GCGGCTTGTGGAGTCTGAATA 60.406 52.381 0.00 0.00 0.00 1.75
2038 2192 0.531974 AAGTCGTTGCAAGAGCCGAA 60.532 50.000 10.94 0.00 41.13 4.30
2058 2212 6.211664 CGAAAGGGACGTGAATGAATATAC 57.788 41.667 0.00 0.00 0.00 1.47
2080 2235 4.234574 CGTTTGCTCTAATTTGGTTTCCC 58.765 43.478 0.00 0.00 0.00 3.97
2170 2327 3.993081 CCGCAAATTTGACCATTTTAGCA 59.007 39.130 22.31 0.00 0.00 3.49
2172 2329 4.432762 CGCAAATTTGACCATTTTAGCACG 60.433 41.667 22.31 6.95 0.00 5.34
2173 2330 4.447389 GCAAATTTGACCATTTTAGCACGT 59.553 37.500 22.31 0.00 0.00 4.49
2202 2359 3.314331 CGGGTGGCTCCAGTGAGT 61.314 66.667 8.03 0.00 40.95 3.41
2205 2362 2.427320 GTGGCTCCAGTGAGTGCA 59.573 61.111 0.00 0.00 40.95 4.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.113815 CCCTCCATCCTTGCCGCA 62.114 66.667 0.00 0.00 0.00 5.69
1 2 4.883354 CCCCTCCATCCTTGCCGC 62.883 72.222 0.00 0.00 0.00 6.53
2 3 4.195334 CCCCCTCCATCCTTGCCG 62.195 72.222 0.00 0.00 0.00 5.69
3 4 2.696125 TCCCCCTCCATCCTTGCC 60.696 66.667 0.00 0.00 0.00 4.52
4 5 2.761465 CCTCCCCCTCCATCCTTGC 61.761 68.421 0.00 0.00 0.00 4.01
5 6 2.081161 CCCTCCCCCTCCATCCTTG 61.081 68.421 0.00 0.00 0.00 3.61
6 7 2.378522 CCCTCCCCCTCCATCCTT 59.621 66.667 0.00 0.00 0.00 3.36
7 8 3.795924 CCCCTCCCCCTCCATCCT 61.796 72.222 0.00 0.00 0.00 3.24
8 9 4.928520 CCCCCTCCCCCTCCATCC 62.929 77.778 0.00 0.00 0.00 3.51
9 10 3.362946 TTCCCCCTCCCCCTCCATC 62.363 68.421 0.00 0.00 0.00 3.51
10 11 3.309509 TTCCCCCTCCCCCTCCAT 61.310 66.667 0.00 0.00 0.00 3.41
11 12 4.038804 CTTCCCCCTCCCCCTCCA 62.039 72.222 0.00 0.00 0.00 3.86
12 13 4.845307 CCTTCCCCCTCCCCCTCC 62.845 77.778 0.00 0.00 0.00 4.30
13 14 4.845307 CCCTTCCCCCTCCCCCTC 62.845 77.778 0.00 0.00 0.00 4.30
16 17 4.381121 TTCCCCTTCCCCCTCCCC 62.381 72.222 0.00 0.00 0.00 4.81
17 18 2.696504 CTTCCCCTTCCCCCTCCC 60.697 72.222 0.00 0.00 0.00 4.30
18 19 2.696504 CCTTCCCCTTCCCCCTCC 60.697 72.222 0.00 0.00 0.00 4.30
19 20 1.694525 CTCCTTCCCCTTCCCCCTC 60.695 68.421 0.00 0.00 0.00 4.30
20 21 2.461637 CTCCTTCCCCTTCCCCCT 59.538 66.667 0.00 0.00 0.00 4.79
21 22 3.421386 GCTCCTTCCCCTTCCCCC 61.421 72.222 0.00 0.00 0.00 5.40
22 23 2.614013 TGCTCCTTCCCCTTCCCC 60.614 66.667 0.00 0.00 0.00 4.81
23 24 3.002371 CTGCTCCTTCCCCTTCCC 58.998 66.667 0.00 0.00 0.00 3.97
24 25 2.273776 GCTGCTCCTTCCCCTTCC 59.726 66.667 0.00 0.00 0.00 3.46
25 26 1.077858 CTGCTGCTCCTTCCCCTTC 60.078 63.158 0.00 0.00 0.00 3.46
26 27 2.610519 CCTGCTGCTCCTTCCCCTT 61.611 63.158 0.00 0.00 0.00 3.95
27 28 3.013932 CCTGCTGCTCCTTCCCCT 61.014 66.667 0.00 0.00 0.00 4.79
28 29 3.334054 ACCTGCTGCTCCTTCCCC 61.334 66.667 0.00 0.00 0.00 4.81
29 30 2.045536 CACCTGCTGCTCCTTCCC 60.046 66.667 0.00 0.00 0.00 3.97
30 31 2.045536 CCACCTGCTGCTCCTTCC 60.046 66.667 0.00 0.00 0.00 3.46
31 32 1.673665 CACCACCTGCTGCTCCTTC 60.674 63.158 0.00 0.00 0.00 3.46
32 33 2.433446 CACCACCTGCTGCTCCTT 59.567 61.111 0.00 0.00 0.00 3.36
33 34 3.644606 CCACCACCTGCTGCTCCT 61.645 66.667 0.00 0.00 0.00 3.69
34 35 3.958860 ACCACCACCTGCTGCTCC 61.959 66.667 0.00 0.00 0.00 4.70
35 36 2.670934 CACCACCACCTGCTGCTC 60.671 66.667 0.00 0.00 0.00 4.26
36 37 4.275508 CCACCACCACCTGCTGCT 62.276 66.667 0.00 0.00 0.00 4.24
66 67 1.081041 TCAACCGACACGTCCATCG 60.081 57.895 6.44 6.44 46.00 3.84
67 68 2.442084 GTCAACCGACACGTCCATC 58.558 57.895 0.00 0.00 42.13 3.51
68 69 4.667420 GTCAACCGACACGTCCAT 57.333 55.556 0.00 0.00 42.13 3.41
76 77 3.712881 GCTGCCGTGTCAACCGAC 61.713 66.667 0.00 0.00 42.93 4.79
79 80 4.980805 TCCGCTGCCGTGTCAACC 62.981 66.667 0.00 0.00 0.00 3.77
80 81 3.414700 CTCCGCTGCCGTGTCAAC 61.415 66.667 0.00 0.00 0.00 3.18
81 82 4.680237 CCTCCGCTGCCGTGTCAA 62.680 66.667 0.00 0.00 0.00 3.18
83 84 4.803426 CTCCTCCGCTGCCGTGTC 62.803 72.222 0.00 0.00 0.00 3.67
91 92 4.488911 ATCCTGGCCTCCTCCGCT 62.489 66.667 3.32 0.00 0.00 5.52
92 93 4.247380 CATCCTGGCCTCCTCCGC 62.247 72.222 3.32 0.00 0.00 5.54
93 94 2.037620 CTTCATCCTGGCCTCCTCCG 62.038 65.000 3.32 0.00 0.00 4.63
94 95 0.692419 TCTTCATCCTGGCCTCCTCC 60.692 60.000 3.32 0.00 0.00 4.30
95 96 1.347378 GATCTTCATCCTGGCCTCCTC 59.653 57.143 3.32 0.00 0.00 3.71
96 97 1.344803 TGATCTTCATCCTGGCCTCCT 60.345 52.381 3.32 0.00 0.00 3.69
97 98 1.072015 CTGATCTTCATCCTGGCCTCC 59.928 57.143 3.32 0.00 0.00 4.30
98 99 1.072015 CCTGATCTTCATCCTGGCCTC 59.928 57.143 3.32 0.00 0.00 4.70
99 100 1.138568 CCTGATCTTCATCCTGGCCT 58.861 55.000 3.32 0.00 0.00 5.19
100 101 1.135094 TCCTGATCTTCATCCTGGCC 58.865 55.000 0.00 0.00 0.00 5.36
101 102 2.848691 CTTCCTGATCTTCATCCTGGC 58.151 52.381 0.00 0.00 0.00 4.85
102 103 2.486907 GGCTTCCTGATCTTCATCCTGG 60.487 54.545 0.00 0.00 0.00 4.45
103 104 2.486907 GGGCTTCCTGATCTTCATCCTG 60.487 54.545 0.00 0.00 0.00 3.86
104 105 1.773653 GGGCTTCCTGATCTTCATCCT 59.226 52.381 0.00 0.00 0.00 3.24
105 106 1.773653 AGGGCTTCCTGATCTTCATCC 59.226 52.381 0.00 0.00 39.96 3.51
106 107 3.389329 TGTAGGGCTTCCTGATCTTCATC 59.611 47.826 0.00 0.00 41.87 2.92
107 108 3.135530 GTGTAGGGCTTCCTGATCTTCAT 59.864 47.826 0.00 0.00 41.87 2.57
108 109 2.501723 GTGTAGGGCTTCCTGATCTTCA 59.498 50.000 0.00 0.00 41.87 3.02
109 110 2.158885 GGTGTAGGGCTTCCTGATCTTC 60.159 54.545 0.00 0.00 41.87 2.87
110 111 1.840635 GGTGTAGGGCTTCCTGATCTT 59.159 52.381 0.00 0.00 41.87 2.40
111 112 1.273838 TGGTGTAGGGCTTCCTGATCT 60.274 52.381 0.00 0.00 41.87 2.75
112 113 1.204146 TGGTGTAGGGCTTCCTGATC 58.796 55.000 0.00 0.00 41.87 2.92
113 114 1.771255 GATGGTGTAGGGCTTCCTGAT 59.229 52.381 0.00 0.00 41.87 2.90
114 115 1.204146 GATGGTGTAGGGCTTCCTGA 58.796 55.000 0.00 0.00 41.87 3.86
115 116 0.911769 TGATGGTGTAGGGCTTCCTG 59.088 55.000 0.00 0.00 41.87 3.86
116 117 0.912486 GTGATGGTGTAGGGCTTCCT 59.088 55.000 0.00 0.00 44.52 3.36
117 118 0.107165 GGTGATGGTGTAGGGCTTCC 60.107 60.000 0.00 0.00 0.00 3.46
118 119 0.618458 TGGTGATGGTGTAGGGCTTC 59.382 55.000 0.00 0.00 0.00 3.86
119 120 1.004745 CTTGGTGATGGTGTAGGGCTT 59.995 52.381 0.00 0.00 0.00 4.35
120 121 0.620556 CTTGGTGATGGTGTAGGGCT 59.379 55.000 0.00 0.00 0.00 5.19
121 122 0.328258 ACTTGGTGATGGTGTAGGGC 59.672 55.000 0.00 0.00 0.00 5.19
122 123 1.065418 GGACTTGGTGATGGTGTAGGG 60.065 57.143 0.00 0.00 0.00 3.53
123 124 1.628340 TGGACTTGGTGATGGTGTAGG 59.372 52.381 0.00 0.00 0.00 3.18
124 125 2.355108 CCTGGACTTGGTGATGGTGTAG 60.355 54.545 0.00 0.00 0.00 2.74
125 126 1.628340 CCTGGACTTGGTGATGGTGTA 59.372 52.381 0.00 0.00 0.00 2.90
126 127 0.401738 CCTGGACTTGGTGATGGTGT 59.598 55.000 0.00 0.00 0.00 4.16
127 128 0.322816 CCCTGGACTTGGTGATGGTG 60.323 60.000 0.00 0.00 0.00 4.17
128 129 0.475632 TCCCTGGACTTGGTGATGGT 60.476 55.000 0.00 0.00 0.00 3.55
129 130 0.254178 CTCCCTGGACTTGGTGATGG 59.746 60.000 0.00 0.00 0.00 3.51
130 131 1.209019 CTCTCCCTGGACTTGGTGATG 59.791 57.143 0.00 0.00 0.00 3.07
131 132 1.577736 CTCTCCCTGGACTTGGTGAT 58.422 55.000 0.00 0.00 0.00 3.06
132 133 1.194781 GCTCTCCCTGGACTTGGTGA 61.195 60.000 0.00 0.00 0.00 4.02
133 134 1.197430 AGCTCTCCCTGGACTTGGTG 61.197 60.000 0.00 0.00 0.00 4.17
134 135 1.159664 AGCTCTCCCTGGACTTGGT 59.840 57.895 0.00 0.00 0.00 3.67
135 136 1.601171 CAGCTCTCCCTGGACTTGG 59.399 63.158 0.00 0.00 0.00 3.61
142 143 0.388659 CTCGAATCCAGCTCTCCCTG 59.611 60.000 0.00 0.00 0.00 4.45
143 144 0.260230 TCTCGAATCCAGCTCTCCCT 59.740 55.000 0.00 0.00 0.00 4.20
144 145 1.115467 TTCTCGAATCCAGCTCTCCC 58.885 55.000 0.00 0.00 0.00 4.30
145 146 1.535015 CGTTCTCGAATCCAGCTCTCC 60.535 57.143 0.00 0.00 39.71 3.71
146 147 1.535015 CCGTTCTCGAATCCAGCTCTC 60.535 57.143 0.00 0.00 39.71 3.20
147 148 0.457851 CCGTTCTCGAATCCAGCTCT 59.542 55.000 0.00 0.00 39.71 4.09
148 149 0.528684 CCCGTTCTCGAATCCAGCTC 60.529 60.000 0.00 0.00 39.71 4.09
149 150 1.517832 CCCGTTCTCGAATCCAGCT 59.482 57.895 0.00 0.00 39.71 4.24
150 151 1.521681 CCCCGTTCTCGAATCCAGC 60.522 63.158 0.00 0.00 39.71 4.85
151 152 0.535335 TTCCCCGTTCTCGAATCCAG 59.465 55.000 0.00 0.00 39.71 3.86
152 153 0.535335 CTTCCCCGTTCTCGAATCCA 59.465 55.000 0.00 0.00 39.71 3.41
153 154 0.179081 CCTTCCCCGTTCTCGAATCC 60.179 60.000 0.00 0.00 39.71 3.01
154 155 0.822164 TCCTTCCCCGTTCTCGAATC 59.178 55.000 0.00 0.00 39.71 2.52
155 156 1.207329 CTTCCTTCCCCGTTCTCGAAT 59.793 52.381 0.00 0.00 39.71 3.34
156 157 0.606604 CTTCCTTCCCCGTTCTCGAA 59.393 55.000 0.00 0.00 39.71 3.71
157 158 1.255667 CCTTCCTTCCCCGTTCTCGA 61.256 60.000 0.00 0.00 39.71 4.04
158 159 1.218316 CCTTCCTTCCCCGTTCTCG 59.782 63.158 0.00 0.00 0.00 4.04
159 160 0.908180 TCCCTTCCTTCCCCGTTCTC 60.908 60.000 0.00 0.00 0.00 2.87
160 161 1.160145 TCCCTTCCTTCCCCGTTCT 59.840 57.895 0.00 0.00 0.00 3.01
161 162 1.298993 GTCCCTTCCTTCCCCGTTC 59.701 63.158 0.00 0.00 0.00 3.95
162 163 2.590114 CGTCCCTTCCTTCCCCGTT 61.590 63.158 0.00 0.00 0.00 4.44
163 164 3.001406 CGTCCCTTCCTTCCCCGT 61.001 66.667 0.00 0.00 0.00 5.28
164 165 3.001406 ACGTCCCTTCCTTCCCCG 61.001 66.667 0.00 0.00 0.00 5.73
165 166 1.272554 ATCACGTCCCTTCCTTCCCC 61.273 60.000 0.00 0.00 0.00 4.81
166 167 0.178301 GATCACGTCCCTTCCTTCCC 59.822 60.000 0.00 0.00 0.00 3.97
167 168 0.902531 TGATCACGTCCCTTCCTTCC 59.097 55.000 0.00 0.00 0.00 3.46
168 169 2.011540 GTGATCACGTCCCTTCCTTC 57.988 55.000 10.69 0.00 0.00 3.46
180 181 3.181485 CCCTCCTTCTCTTACGTGATCAC 60.181 52.174 16.21 16.21 0.00 3.06
181 182 3.024547 CCCTCCTTCTCTTACGTGATCA 58.975 50.000 0.00 0.00 0.00 2.92
182 183 3.025262 ACCCTCCTTCTCTTACGTGATC 58.975 50.000 0.00 0.00 0.00 2.92
183 184 2.761208 CACCCTCCTTCTCTTACGTGAT 59.239 50.000 0.00 0.00 0.00 3.06
184 185 2.168496 CACCCTCCTTCTCTTACGTGA 58.832 52.381 0.00 0.00 0.00 4.35
185 186 1.404315 GCACCCTCCTTCTCTTACGTG 60.404 57.143 0.00 0.00 0.00 4.49
186 187 0.896226 GCACCCTCCTTCTCTTACGT 59.104 55.000 0.00 0.00 0.00 3.57
187 188 0.179134 CGCACCCTCCTTCTCTTACG 60.179 60.000 0.00 0.00 0.00 3.18
188 189 0.175989 CCGCACCCTCCTTCTCTTAC 59.824 60.000 0.00 0.00 0.00 2.34
189 190 0.040646 TCCGCACCCTCCTTCTCTTA 59.959 55.000 0.00 0.00 0.00 2.10
190 191 1.229209 TCCGCACCCTCCTTCTCTT 60.229 57.895 0.00 0.00 0.00 2.85
191 192 1.684049 CTCCGCACCCTCCTTCTCT 60.684 63.158 0.00 0.00 0.00 3.10
192 193 2.896443 CTCCGCACCCTCCTTCTC 59.104 66.667 0.00 0.00 0.00 2.87
193 194 3.394836 GCTCCGCACCCTCCTTCT 61.395 66.667 0.00 0.00 0.00 2.85
194 195 4.475135 GGCTCCGCACCCTCCTTC 62.475 72.222 0.00 0.00 0.00 3.46
205 206 4.152964 TAGCTGCTGCAGGCTCCG 62.153 66.667 29.05 5.87 42.74 4.63
206 207 2.203042 CTAGCTGCTGCAGGCTCC 60.203 66.667 29.05 13.61 42.74 4.70
207 208 2.203042 CCTAGCTGCTGCAGGCTC 60.203 66.667 29.05 13.96 42.74 4.70
210 211 1.069427 CTAGCCTAGCTGCTGCAGG 59.931 63.158 29.05 20.29 42.77 4.85
211 212 4.754570 CTAGCCTAGCTGCTGCAG 57.245 61.111 24.80 24.80 42.77 4.41
237 238 3.799755 CGCCACGCTAGGGTTTGC 61.800 66.667 10.17 14.34 0.00 3.68
238 239 3.124921 CCGCCACGCTAGGGTTTG 61.125 66.667 10.17 5.82 0.00 2.93
250 251 4.257654 TTCTTCCAACCGCCGCCA 62.258 61.111 0.00 0.00 0.00 5.69
251 252 3.431725 CTTCTTCCAACCGCCGCC 61.432 66.667 0.00 0.00 0.00 6.13
252 253 2.358247 TCTTCTTCCAACCGCCGC 60.358 61.111 0.00 0.00 0.00 6.53
253 254 0.320421 TTCTCTTCTTCCAACCGCCG 60.320 55.000 0.00 0.00 0.00 6.46
254 255 1.443802 CTTCTCTTCTTCCAACCGCC 58.556 55.000 0.00 0.00 0.00 6.13
255 256 1.443802 CCTTCTCTTCTTCCAACCGC 58.556 55.000 0.00 0.00 0.00 5.68
256 257 1.623811 TCCCTTCTCTTCTTCCAACCG 59.376 52.381 0.00 0.00 0.00 4.44
257 258 2.907042 TCTCCCTTCTCTTCTTCCAACC 59.093 50.000 0.00 0.00 0.00 3.77
258 259 4.512484 CATCTCCCTTCTCTTCTTCCAAC 58.488 47.826 0.00 0.00 0.00 3.77
259 260 3.521126 CCATCTCCCTTCTCTTCTTCCAA 59.479 47.826 0.00 0.00 0.00 3.53
260 261 3.110705 CCATCTCCCTTCTCTTCTTCCA 58.889 50.000 0.00 0.00 0.00 3.53
261 262 2.437651 CCCATCTCCCTTCTCTTCTTCC 59.562 54.545 0.00 0.00 0.00 3.46
262 263 3.379452 TCCCATCTCCCTTCTCTTCTTC 58.621 50.000 0.00 0.00 0.00 2.87
263 264 3.498614 TCCCATCTCCCTTCTCTTCTT 57.501 47.619 0.00 0.00 0.00 2.52
264 265 3.383223 CTTCCCATCTCCCTTCTCTTCT 58.617 50.000 0.00 0.00 0.00 2.85
265 266 2.437651 CCTTCCCATCTCCCTTCTCTTC 59.562 54.545 0.00 0.00 0.00 2.87
266 267 2.226013 ACCTTCCCATCTCCCTTCTCTT 60.226 50.000 0.00 0.00 0.00 2.85
267 268 1.367848 ACCTTCCCATCTCCCTTCTCT 59.632 52.381 0.00 0.00 0.00 3.10
268 269 1.488393 CACCTTCCCATCTCCCTTCTC 59.512 57.143 0.00 0.00 0.00 2.87
269 270 1.589414 CACCTTCCCATCTCCCTTCT 58.411 55.000 0.00 0.00 0.00 2.85
270 271 0.548510 CCACCTTCCCATCTCCCTTC 59.451 60.000 0.00 0.00 0.00 3.46
271 272 0.121197 TCCACCTTCCCATCTCCCTT 59.879 55.000 0.00 0.00 0.00 3.95
272 273 0.327000 CTCCACCTTCCCATCTCCCT 60.327 60.000 0.00 0.00 0.00 4.20
273 274 0.326618 TCTCCACCTTCCCATCTCCC 60.327 60.000 0.00 0.00 0.00 4.30
274 275 0.833949 GTCTCCACCTTCCCATCTCC 59.166 60.000 0.00 0.00 0.00 3.71
275 276 0.461961 CGTCTCCACCTTCCCATCTC 59.538 60.000 0.00 0.00 0.00 2.75
276 277 0.978146 CCGTCTCCACCTTCCCATCT 60.978 60.000 0.00 0.00 0.00 2.90
277 278 1.522569 CCGTCTCCACCTTCCCATC 59.477 63.158 0.00 0.00 0.00 3.51
278 279 1.995626 CCCGTCTCCACCTTCCCAT 60.996 63.158 0.00 0.00 0.00 4.00
279 280 2.606519 CCCGTCTCCACCTTCCCA 60.607 66.667 0.00 0.00 0.00 4.37
280 281 1.900545 CTTCCCGTCTCCACCTTCCC 61.901 65.000 0.00 0.00 0.00 3.97
281 282 1.597461 CTTCCCGTCTCCACCTTCC 59.403 63.158 0.00 0.00 0.00 3.46
282 283 1.079057 GCTTCCCGTCTCCACCTTC 60.079 63.158 0.00 0.00 0.00 3.46
283 284 1.536662 AGCTTCCCGTCTCCACCTT 60.537 57.895 0.00 0.00 0.00 3.50
284 285 2.120718 AGCTTCCCGTCTCCACCT 59.879 61.111 0.00 0.00 0.00 4.00
285 286 2.266055 CAGCTTCCCGTCTCCACC 59.734 66.667 0.00 0.00 0.00 4.61
286 287 2.266055 CCAGCTTCCCGTCTCCAC 59.734 66.667 0.00 0.00 0.00 4.02
287 288 2.822643 ATCCCAGCTTCCCGTCTCCA 62.823 60.000 0.00 0.00 0.00 3.86
288 289 0.759436 TATCCCAGCTTCCCGTCTCC 60.759 60.000 0.00 0.00 0.00 3.71
289 290 0.389757 GTATCCCAGCTTCCCGTCTC 59.610 60.000 0.00 0.00 0.00 3.36
290 291 1.392710 CGTATCCCAGCTTCCCGTCT 61.393 60.000 0.00 0.00 0.00 4.18
291 292 1.067582 CGTATCCCAGCTTCCCGTC 59.932 63.158 0.00 0.00 0.00 4.79
292 293 2.432300 CCGTATCCCAGCTTCCCGT 61.432 63.158 0.00 0.00 0.00 5.28
293 294 2.421739 CCGTATCCCAGCTTCCCG 59.578 66.667 0.00 0.00 0.00 5.14
294 295 2.829592 CCCGTATCCCAGCTTCCC 59.170 66.667 0.00 0.00 0.00 3.97
295 296 1.984288 AAGCCCGTATCCCAGCTTCC 61.984 60.000 0.00 0.00 41.60 3.46
296 297 0.815615 CAAGCCCGTATCCCAGCTTC 60.816 60.000 0.00 0.00 43.45 3.86
297 298 1.224592 CAAGCCCGTATCCCAGCTT 59.775 57.895 0.00 0.00 46.10 3.74
298 299 2.746375 CCAAGCCCGTATCCCAGCT 61.746 63.158 0.00 0.00 37.10 4.24
299 300 2.203209 CCAAGCCCGTATCCCAGC 60.203 66.667 0.00 0.00 0.00 4.85
300 301 2.510906 CCCAAGCCCGTATCCCAG 59.489 66.667 0.00 0.00 0.00 4.45
301 302 3.804329 GCCCAAGCCCGTATCCCA 61.804 66.667 0.00 0.00 0.00 4.37
311 312 2.223464 TATGACCCCAAGGCCCAAGC 62.223 60.000 0.00 0.00 36.11 4.01
312 313 0.395724 GTATGACCCCAAGGCCCAAG 60.396 60.000 0.00 0.00 36.11 3.61
313 314 1.694856 GTATGACCCCAAGGCCCAA 59.305 57.895 0.00 0.00 36.11 4.12
314 315 2.675242 CGTATGACCCCAAGGCCCA 61.675 63.158 0.00 0.00 36.11 5.36
315 316 1.917336 TTCGTATGACCCCAAGGCCC 61.917 60.000 0.00 0.00 36.11 5.80
316 317 0.182775 ATTCGTATGACCCCAAGGCC 59.817 55.000 0.00 0.00 36.11 5.19
317 318 1.134220 TCATTCGTATGACCCCAAGGC 60.134 52.381 0.00 0.00 35.87 4.35
318 319 2.943033 GTTCATTCGTATGACCCCAAGG 59.057 50.000 3.99 0.00 40.42 3.61
319 320 2.943033 GGTTCATTCGTATGACCCCAAG 59.057 50.000 7.29 0.00 40.42 3.61
320 321 2.678479 CGGTTCATTCGTATGACCCCAA 60.678 50.000 12.04 0.00 39.51 4.12
321 322 1.134640 CGGTTCATTCGTATGACCCCA 60.135 52.381 12.04 0.00 39.51 4.96
322 323 1.137479 TCGGTTCATTCGTATGACCCC 59.863 52.381 12.04 10.33 39.51 4.95
323 324 2.199236 GTCGGTTCATTCGTATGACCC 58.801 52.381 8.33 8.33 40.42 4.46
324 325 2.199236 GGTCGGTTCATTCGTATGACC 58.801 52.381 3.99 8.48 40.42 4.02
325 326 1.850441 CGGTCGGTTCATTCGTATGAC 59.150 52.381 3.99 0.90 40.42 3.06
326 327 1.202325 CCGGTCGGTTCATTCGTATGA 60.202 52.381 0.00 0.00 39.00 2.15
327 328 1.205657 CCGGTCGGTTCATTCGTATG 58.794 55.000 0.55 0.00 0.00 2.39
328 329 0.529119 GCCGGTCGGTTCATTCGTAT 60.529 55.000 11.25 0.00 37.65 3.06
329 330 1.153784 GCCGGTCGGTTCATTCGTA 60.154 57.895 11.25 0.00 37.65 3.43
330 331 2.433664 GCCGGTCGGTTCATTCGT 60.434 61.111 11.25 0.00 37.65 3.85
331 332 3.550992 CGCCGGTCGGTTCATTCG 61.551 66.667 11.25 1.18 37.65 3.34
332 333 0.249155 TATCGCCGGTCGGTTCATTC 60.249 55.000 16.35 0.00 39.05 2.67
333 334 0.391597 ATATCGCCGGTCGGTTCATT 59.608 50.000 16.35 0.00 39.05 2.57
334 335 0.391597 AATATCGCCGGTCGGTTCAT 59.608 50.000 16.35 6.86 39.05 2.57
335 336 1.031235 TAATATCGCCGGTCGGTTCA 58.969 50.000 16.35 0.00 39.05 3.18
336 337 1.412387 GTAATATCGCCGGTCGGTTC 58.588 55.000 16.35 0.00 39.05 3.62
337 338 0.032540 GGTAATATCGCCGGTCGGTT 59.967 55.000 16.35 11.79 39.05 4.44
338 339 1.662044 GGTAATATCGCCGGTCGGT 59.338 57.895 16.35 12.80 39.05 4.69
339 340 1.443194 CGGTAATATCGCCGGTCGG 60.443 63.158 16.35 4.85 43.85 4.79
340 341 4.141883 CGGTAATATCGCCGGTCG 57.858 61.111 1.90 7.73 43.85 4.79
345 346 3.246936 GGTTTTCAGTCGGTAATATCGCC 59.753 47.826 0.00 0.00 0.00 5.54
346 347 4.025979 CAGGTTTTCAGTCGGTAATATCGC 60.026 45.833 0.00 0.00 0.00 4.58
347 348 4.025979 GCAGGTTTTCAGTCGGTAATATCG 60.026 45.833 0.00 0.00 0.00 2.92
348 349 4.873827 TGCAGGTTTTCAGTCGGTAATATC 59.126 41.667 0.00 0.00 0.00 1.63
349 350 4.839121 TGCAGGTTTTCAGTCGGTAATAT 58.161 39.130 0.00 0.00 0.00 1.28
350 351 4.250464 CTGCAGGTTTTCAGTCGGTAATA 58.750 43.478 5.57 0.00 0.00 0.98
351 352 3.074412 CTGCAGGTTTTCAGTCGGTAAT 58.926 45.455 5.57 0.00 0.00 1.89
352 353 2.489971 CTGCAGGTTTTCAGTCGGTAA 58.510 47.619 5.57 0.00 0.00 2.85
353 354 1.876416 GCTGCAGGTTTTCAGTCGGTA 60.876 52.381 17.12 0.00 33.09 4.02
354 355 1.166531 GCTGCAGGTTTTCAGTCGGT 61.167 55.000 17.12 0.00 33.09 4.69
355 356 0.886490 AGCTGCAGGTTTTCAGTCGG 60.886 55.000 13.85 0.00 33.09 4.79
356 357 0.236711 CAGCTGCAGGTTTTCAGTCG 59.763 55.000 17.45 0.00 33.09 4.18
357 358 0.039708 GCAGCTGCAGGTTTTCAGTC 60.040 55.000 33.36 0.00 41.59 3.51
358 359 1.458639 GGCAGCTGCAGGTTTTCAGT 61.459 55.000 37.63 0.00 44.36 3.41
359 360 1.288127 GGCAGCTGCAGGTTTTCAG 59.712 57.895 37.63 5.70 44.36 3.02
360 361 1.455402 TGGCAGCTGCAGGTTTTCA 60.455 52.632 37.63 22.40 44.36 2.69
361 362 1.288127 CTGGCAGCTGCAGGTTTTC 59.712 57.895 37.63 20.06 44.36 2.29
362 363 2.205152 CCTGGCAGCTGCAGGTTTT 61.205 57.895 37.63 0.00 44.36 2.43
363 364 2.599578 CCTGGCAGCTGCAGGTTT 60.600 61.111 37.63 0.00 44.36 3.27
364 365 3.894638 ACCTGGCAGCTGCAGGTT 61.895 61.111 36.62 26.86 44.34 3.50
365 366 4.655647 CACCTGGCAGCTGCAGGT 62.656 66.667 36.62 36.62 46.13 4.00
367 368 4.655647 ACCACCTGGCAGCTGCAG 62.656 66.667 37.63 29.43 44.36 4.41
368 369 4.648626 GACCACCTGGCAGCTGCA 62.649 66.667 37.63 23.01 44.36 4.41
370 371 4.729918 GGGACCACCTGGCAGCTG 62.730 72.222 10.11 10.11 39.32 4.24
372 373 4.729918 CTGGGACCACCTGGCAGC 62.730 72.222 9.56 0.00 41.11 5.25
373 374 4.729918 GCTGGGACCACCTGGCAG 62.730 72.222 7.75 7.75 41.11 4.85
375 376 4.729918 CTGCTGGGACCACCTGGC 62.730 72.222 0.00 0.00 41.11 4.85
376 377 4.729918 GCTGCTGGGACCACCTGG 62.730 72.222 0.00 0.00 41.11 4.45
377 378 4.729918 GGCTGCTGGGACCACCTG 62.730 72.222 0.00 0.00 41.11 4.00
383 384 3.733344 TAATCGCGGCTGCTGGGAC 62.733 63.158 27.54 2.49 39.65 4.46
384 385 3.025189 TTAATCGCGGCTGCTGGGA 62.025 57.895 27.23 27.23 39.65 4.37
385 386 2.513666 TTAATCGCGGCTGCTGGG 60.514 61.111 18.47 18.47 39.65 4.45
386 387 2.709475 GTTAATCGCGGCTGCTGG 59.291 61.111 17.03 0.19 39.65 4.85
387 388 2.106074 TGGTTAATCGCGGCTGCTG 61.106 57.895 17.03 9.49 39.65 4.41
388 389 2.106683 GTGGTTAATCGCGGCTGCT 61.107 57.895 17.03 0.00 39.65 4.24
389 390 1.917782 TTGTGGTTAATCGCGGCTGC 61.918 55.000 7.70 7.70 37.91 5.25
390 391 0.732571 ATTGTGGTTAATCGCGGCTG 59.267 50.000 6.13 0.00 0.00 4.85
391 392 0.732571 CATTGTGGTTAATCGCGGCT 59.267 50.000 6.13 0.00 0.00 5.52
392 393 0.865639 GCATTGTGGTTAATCGCGGC 60.866 55.000 6.13 0.00 0.00 6.53
393 394 0.732571 AGCATTGTGGTTAATCGCGG 59.267 50.000 6.13 0.00 0.00 6.46
394 395 1.268032 GGAGCATTGTGGTTAATCGCG 60.268 52.381 0.00 0.00 0.00 5.87
395 396 1.742831 TGGAGCATTGTGGTTAATCGC 59.257 47.619 0.00 0.00 0.00 4.58
396 397 4.637483 ATTGGAGCATTGTGGTTAATCG 57.363 40.909 0.00 0.00 0.00 3.34
397 398 5.036737 CGAATTGGAGCATTGTGGTTAATC 58.963 41.667 0.00 0.00 0.00 1.75
398 399 4.462483 ACGAATTGGAGCATTGTGGTTAAT 59.538 37.500 0.00 0.00 0.00 1.40
399 400 3.823873 ACGAATTGGAGCATTGTGGTTAA 59.176 39.130 0.00 0.00 0.00 2.01
400 401 3.190327 CACGAATTGGAGCATTGTGGTTA 59.810 43.478 0.00 0.00 0.00 2.85
401 402 2.030007 CACGAATTGGAGCATTGTGGTT 60.030 45.455 0.00 0.00 0.00 3.67
402 403 1.541147 CACGAATTGGAGCATTGTGGT 59.459 47.619 0.00 0.00 0.00 4.16
403 404 2.267188 CACGAATTGGAGCATTGTGG 57.733 50.000 0.00 0.00 0.00 4.17
413 414 2.403252 ACTAAGCTCCCACGAATTGG 57.597 50.000 0.00 0.00 46.47 3.16
414 415 4.330074 CAGTTACTAAGCTCCCACGAATTG 59.670 45.833 0.00 0.00 0.00 2.32
415 416 4.020485 ACAGTTACTAAGCTCCCACGAATT 60.020 41.667 0.00 0.00 0.00 2.17
416 417 3.514309 ACAGTTACTAAGCTCCCACGAAT 59.486 43.478 0.00 0.00 0.00 3.34
417 418 2.895404 ACAGTTACTAAGCTCCCACGAA 59.105 45.455 0.00 0.00 0.00 3.85
418 419 2.522185 ACAGTTACTAAGCTCCCACGA 58.478 47.619 0.00 0.00 0.00 4.35
419 420 4.360563 CATACAGTTACTAAGCTCCCACG 58.639 47.826 0.00 0.00 0.00 4.94
420 421 4.120589 GCATACAGTTACTAAGCTCCCAC 58.879 47.826 0.00 0.00 0.00 4.61
421 422 3.134081 GGCATACAGTTACTAAGCTCCCA 59.866 47.826 0.00 0.00 0.00 4.37
422 423 3.388350 AGGCATACAGTTACTAAGCTCCC 59.612 47.826 0.00 0.00 0.00 4.30
423 424 4.372656 CAGGCATACAGTTACTAAGCTCC 58.627 47.826 0.00 0.00 0.00 4.70
424 425 3.804873 GCAGGCATACAGTTACTAAGCTC 59.195 47.826 0.00 0.00 0.00 4.09
425 426 3.197766 TGCAGGCATACAGTTACTAAGCT 59.802 43.478 0.00 0.00 0.00 3.74
426 427 3.531538 TGCAGGCATACAGTTACTAAGC 58.468 45.455 0.00 0.00 0.00 3.09
427 428 5.643777 AGTTTGCAGGCATACAGTTACTAAG 59.356 40.000 15.42 0.00 31.79 2.18
428 429 5.556915 AGTTTGCAGGCATACAGTTACTAA 58.443 37.500 15.42 0.00 31.79 2.24
429 430 5.160607 AGTTTGCAGGCATACAGTTACTA 57.839 39.130 15.42 0.00 31.79 1.82
430 431 4.021102 AGTTTGCAGGCATACAGTTACT 57.979 40.909 15.42 0.65 31.79 2.24
431 432 5.873179 TTAGTTTGCAGGCATACAGTTAC 57.127 39.130 15.42 0.00 31.79 2.50
432 433 6.183360 CGATTTAGTTTGCAGGCATACAGTTA 60.183 38.462 15.42 0.00 31.79 2.24
433 434 5.391950 CGATTTAGTTTGCAGGCATACAGTT 60.392 40.000 15.42 0.30 31.79 3.16
434 435 4.094887 CGATTTAGTTTGCAGGCATACAGT 59.905 41.667 15.42 0.92 31.79 3.55
435 436 4.496341 CCGATTTAGTTTGCAGGCATACAG 60.496 45.833 15.42 2.25 31.79 2.74
436 437 3.376859 CCGATTTAGTTTGCAGGCATACA 59.623 43.478 15.42 1.58 31.79 2.29
437 438 3.792124 GCCGATTTAGTTTGCAGGCATAC 60.792 47.826 6.73 6.73 42.37 2.39
438 439 2.357637 GCCGATTTAGTTTGCAGGCATA 59.642 45.455 3.18 0.00 42.37 3.14
541 542 7.228706 AGAGTGGTAGTAGTTGATTTTTGTTGG 59.771 37.037 0.00 0.00 0.00 3.77
558 559 4.158764 CCCTGTAAACTGAGAGAGTGGTAG 59.841 50.000 0.00 0.00 34.02 3.18
560 561 2.900546 CCCTGTAAACTGAGAGAGTGGT 59.099 50.000 0.00 0.00 34.02 4.16
561 562 2.354203 GCCCTGTAAACTGAGAGAGTGG 60.354 54.545 0.00 0.00 34.02 4.00
562 563 2.300152 TGCCCTGTAAACTGAGAGAGTG 59.700 50.000 0.00 0.00 34.02 3.51
563 564 2.609747 TGCCCTGTAAACTGAGAGAGT 58.390 47.619 0.00 0.00 35.94 3.24
565 566 2.355108 GCATGCCCTGTAAACTGAGAGA 60.355 50.000 6.36 0.00 0.00 3.10
566 567 2.012673 GCATGCCCTGTAAACTGAGAG 58.987 52.381 6.36 0.00 0.00 3.20
567 568 1.675714 CGCATGCCCTGTAAACTGAGA 60.676 52.381 13.15 0.00 0.00 3.27
568 569 0.729116 CGCATGCCCTGTAAACTGAG 59.271 55.000 13.15 0.00 0.00 3.35
569 570 1.305219 GCGCATGCCCTGTAAACTGA 61.305 55.000 13.15 0.00 33.98 3.41
570 571 1.137404 GCGCATGCCCTGTAAACTG 59.863 57.895 13.15 0.00 33.98 3.16
571 572 2.398554 CGCGCATGCCCTGTAAACT 61.399 57.895 13.15 0.00 38.08 2.66
572 573 1.363145 TACGCGCATGCCCTGTAAAC 61.363 55.000 13.15 0.00 38.08 2.01
573 574 0.462937 ATACGCGCATGCCCTGTAAA 60.463 50.000 13.15 0.00 38.08 2.01
574 575 0.462937 AATACGCGCATGCCCTGTAA 60.463 50.000 13.15 0.00 38.08 2.41
575 576 0.878523 GAATACGCGCATGCCCTGTA 60.879 55.000 13.15 12.51 38.08 2.74
576 577 2.124736 AATACGCGCATGCCCTGT 60.125 55.556 13.15 10.60 38.08 4.00
577 578 2.633657 GAATACGCGCATGCCCTG 59.366 61.111 13.15 4.41 38.08 4.45
578 579 1.754380 TAGGAATACGCGCATGCCCT 61.754 55.000 13.10 14.39 38.08 5.19
579 580 1.291877 CTAGGAATACGCGCATGCCC 61.292 60.000 13.10 7.73 38.08 5.36
580 581 1.291877 CCTAGGAATACGCGCATGCC 61.292 60.000 8.45 8.45 38.08 4.40
581 582 0.600255 ACCTAGGAATACGCGCATGC 60.600 55.000 17.98 7.91 37.91 4.06
582 583 1.419374 GACCTAGGAATACGCGCATG 58.581 55.000 17.98 0.00 0.00 4.06
583 584 0.039437 CGACCTAGGAATACGCGCAT 60.039 55.000 17.98 0.00 0.00 4.73
584 585 1.357690 CGACCTAGGAATACGCGCA 59.642 57.895 17.98 0.00 0.00 6.09
585 586 0.248784 AACGACCTAGGAATACGCGC 60.249 55.000 17.98 0.00 0.00 6.86
586 587 3.338818 TTAACGACCTAGGAATACGCG 57.661 47.619 17.98 3.53 0.00 6.01
587 588 5.750067 TCAAATTAACGACCTAGGAATACGC 59.250 40.000 17.98 0.00 0.00 4.42
588 589 6.199719 GGTCAAATTAACGACCTAGGAATACG 59.800 42.308 17.98 16.64 46.83 3.06
589 590 7.474398 GGTCAAATTAACGACCTAGGAATAC 57.526 40.000 17.98 2.97 46.83 1.89
656 657 7.983484 TCTTTTGAAAGTAGAAACTCCGTAGTT 59.017 33.333 3.63 0.00 40.99 2.24
657 658 7.495055 TCTTTTGAAAGTAGAAACTCCGTAGT 58.505 34.615 3.63 0.00 37.31 2.73
658 659 7.941795 TCTTTTGAAAGTAGAAACTCCGTAG 57.058 36.000 3.63 0.00 37.31 3.51
723 724 9.727859 TGGTGTGTGTATACATAAGTTGTTAAT 57.272 29.630 9.18 0.00 39.87 1.40
724 725 8.991026 GTGGTGTGTGTATACATAAGTTGTTAA 58.009 33.333 9.18 0.00 39.87 2.01
725 726 8.369424 AGTGGTGTGTGTATACATAAGTTGTTA 58.631 33.333 9.18 0.00 39.87 2.41
726 727 7.221450 AGTGGTGTGTGTATACATAAGTTGTT 58.779 34.615 9.18 0.00 39.87 2.83
727 728 6.765403 AGTGGTGTGTGTATACATAAGTTGT 58.235 36.000 9.18 0.00 42.62 3.32
728 729 7.172532 ACAAGTGGTGTGTGTATACATAAGTTG 59.827 37.037 9.18 12.12 39.72 3.16
729 730 7.221450 ACAAGTGGTGTGTGTATACATAAGTT 58.779 34.615 9.18 0.00 39.72 2.66
730 731 6.765403 ACAAGTGGTGTGTGTATACATAAGT 58.235 36.000 9.18 0.00 39.72 2.24
731 732 8.766000 TTACAAGTGGTGTGTGTATACATAAG 57.234 34.615 9.18 0.00 41.89 1.73
732 733 8.991026 GTTTACAAGTGGTGTGTGTATACATAA 58.009 33.333 9.18 0.00 41.89 1.90
733 734 8.369424 AGTTTACAAGTGGTGTGTGTATACATA 58.631 33.333 9.18 3.08 41.89 2.29
734 735 7.172532 CAGTTTACAAGTGGTGTGTGTATACAT 59.827 37.037 9.18 0.00 41.89 2.29
735 736 6.480651 CAGTTTACAAGTGGTGTGTGTATACA 59.519 38.462 0.08 0.08 41.89 2.29
736 737 6.702723 TCAGTTTACAAGTGGTGTGTGTATAC 59.297 38.462 0.00 0.00 41.89 1.47
737 738 6.818233 TCAGTTTACAAGTGGTGTGTGTATA 58.182 36.000 0.00 0.00 41.89 1.47
738 739 5.676552 TCAGTTTACAAGTGGTGTGTGTAT 58.323 37.500 0.00 0.00 41.89 2.29
739 740 5.087391 TCAGTTTACAAGTGGTGTGTGTA 57.913 39.130 0.00 0.00 41.89 2.90
740 741 3.945346 TCAGTTTACAAGTGGTGTGTGT 58.055 40.909 0.00 0.00 41.89 3.72
741 742 4.955925 TTCAGTTTACAAGTGGTGTGTG 57.044 40.909 0.00 0.00 41.89 3.82
742 743 4.142773 CGTTTCAGTTTACAAGTGGTGTGT 60.143 41.667 0.00 0.00 41.89 3.72
743 744 4.339429 CGTTTCAGTTTACAAGTGGTGTG 58.661 43.478 0.00 0.00 41.89 3.82
744 745 3.375922 CCGTTTCAGTTTACAAGTGGTGT 59.624 43.478 0.00 0.00 44.82 4.16
745 746 3.623960 TCCGTTTCAGTTTACAAGTGGTG 59.376 43.478 0.00 0.00 32.61 4.17
746 747 3.875134 CTCCGTTTCAGTTTACAAGTGGT 59.125 43.478 0.00 0.00 32.61 4.16
747 748 3.250040 CCTCCGTTTCAGTTTACAAGTGG 59.750 47.826 0.00 0.00 32.61 4.00
748 749 3.303791 GCCTCCGTTTCAGTTTACAAGTG 60.304 47.826 0.00 0.00 0.00 3.16
749 750 2.876550 GCCTCCGTTTCAGTTTACAAGT 59.123 45.455 0.00 0.00 0.00 3.16
750 751 2.875933 TGCCTCCGTTTCAGTTTACAAG 59.124 45.455 0.00 0.00 0.00 3.16
751 752 2.920524 TGCCTCCGTTTCAGTTTACAA 58.079 42.857 0.00 0.00 0.00 2.41
752 753 2.623878 TGCCTCCGTTTCAGTTTACA 57.376 45.000 0.00 0.00 0.00 2.41
753 754 4.873827 TCATATGCCTCCGTTTCAGTTTAC 59.126 41.667 0.00 0.00 0.00 2.01
754 755 4.873827 GTCATATGCCTCCGTTTCAGTTTA 59.126 41.667 0.00 0.00 0.00 2.01
755 756 3.689649 GTCATATGCCTCCGTTTCAGTTT 59.310 43.478 0.00 0.00 0.00 2.66
756 757 3.270877 GTCATATGCCTCCGTTTCAGTT 58.729 45.455 0.00 0.00 0.00 3.16
757 758 2.420129 GGTCATATGCCTCCGTTTCAGT 60.420 50.000 0.00 0.00 0.00 3.41
758 759 2.213499 GGTCATATGCCTCCGTTTCAG 58.787 52.381 0.00 0.00 0.00 3.02
759 760 1.472552 CGGTCATATGCCTCCGTTTCA 60.473 52.381 18.64 0.00 38.45 2.69
760 761 1.217882 CGGTCATATGCCTCCGTTTC 58.782 55.000 18.64 0.00 38.45 2.78
761 762 0.814010 GCGGTCATATGCCTCCGTTT 60.814 55.000 23.70 0.00 44.07 3.60
762 763 1.227556 GCGGTCATATGCCTCCGTT 60.228 57.895 23.70 0.00 44.07 4.44
763 764 1.758440 ATGCGGTCATATGCCTCCGT 61.758 55.000 23.70 10.93 44.07 4.69
764 765 0.603707 AATGCGGTCATATGCCTCCG 60.604 55.000 20.97 20.97 44.86 4.63
765 766 1.160137 GAATGCGGTCATATGCCTCC 58.840 55.000 12.45 7.62 31.46 4.30
832 849 0.905357 CAACGATTCTCCCTGTCCCT 59.095 55.000 0.00 0.00 0.00 4.20
833 850 0.902531 TCAACGATTCTCCCTGTCCC 59.097 55.000 0.00 0.00 0.00 4.46
834 851 1.736032 CGTCAACGATTCTCCCTGTCC 60.736 57.143 0.00 0.00 43.02 4.02
835 852 1.201647 TCGTCAACGATTCTCCCTGTC 59.798 52.381 0.22 0.00 44.22 3.51
836 853 1.254026 TCGTCAACGATTCTCCCTGT 58.746 50.000 0.22 0.00 44.22 4.00
1339 1430 0.864797 GTATGAAGTCGTCGGCGGAC 60.865 60.000 10.62 14.05 39.89 4.79
1636 1771 7.194962 ACTACTACTGTTTATTCTAGAAGCGC 58.805 38.462 11.53 0.00 0.00 5.92
1656 1794 6.292596 GCGCTAATAACAGAGTACGTACTACT 60.293 42.308 27.44 21.23 38.52 2.57
1721 1859 5.452302 CGCCATACATCGATCTTTTGTTTTC 59.548 40.000 0.00 0.00 0.00 2.29
1775 1924 3.277715 TCAAGCCGAACATGCATGATAA 58.722 40.909 32.75 4.93 32.12 1.75
1849 2003 0.877649 CCATCCGGTTCTCAGCATCG 60.878 60.000 0.00 0.00 0.00 3.84
1859 2013 0.991920 ACCAAGATCACCATCCGGTT 59.008 50.000 0.00 0.00 46.31 4.44
1878 2032 2.033236 CGCACGCAAGAAGAAAAGTACA 60.033 45.455 0.00 0.00 43.62 2.90
1947 2101 0.182775 AACCGGGAGTGCTTTGAAGT 59.817 50.000 6.32 0.00 0.00 3.01
1988 2142 2.651455 CACTGGATGATTCAGCACCAT 58.349 47.619 0.00 0.00 35.78 3.55
2026 2180 1.302511 GTCCCTTTCGGCTCTTGCA 60.303 57.895 0.00 0.00 41.91 4.08
2038 2192 5.272283 ACGTATATTCATTCACGTCCCTT 57.728 39.130 0.00 0.00 43.61 3.95
2080 2235 2.125912 CCTGGAGTGGCGAACGAG 60.126 66.667 0.00 0.00 0.00 4.18
2198 2355 1.906994 GCGCGGTTATTGTGCACTCA 61.907 55.000 19.41 4.97 42.27 3.41
2200 2357 2.867472 GCGCGGTTATTGTGCACT 59.133 55.556 19.41 0.28 42.27 4.40
2202 2359 4.453183 GCGCGCGGTTATTGTGCA 62.453 61.111 33.06 0.00 42.82 4.57
2514 2684 4.845580 CGGCGGCATGAAGAGGCT 62.846 66.667 10.53 0.00 0.00 4.58
2591 2762 2.464459 CGCATTGGGGAGCTTCGAC 61.464 63.158 0.00 0.00 0.00 4.20


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.