Multiple sequence alignment - TraesCS4D01G225400

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G225400 chr4D 100.000 2656 0 0 1 2656 383782116 383784771 0.000000e+00 4905.0
1 TraesCS4D01G225400 chr4D 86.468 1175 88 35 694 1808 402970948 402972111 0.000000e+00 1223.0
2 TraesCS4D01G225400 chr4B 91.992 1923 88 27 1 1897 470971175 470973057 0.000000e+00 2638.0
3 TraesCS4D01G225400 chr4B 85.384 1081 92 39 695 1739 499059603 499060653 0.000000e+00 1061.0
4 TraesCS4D01G225400 chr4B 96.250 80 3 0 1896 1975 470973272 470973351 5.970000e-27 132.0
5 TraesCS4D01G225400 chr4A 92.906 1748 66 21 1 1735 65465642 65467344 0.000000e+00 2488.0
6 TraesCS4D01G225400 chr4A 87.078 1037 78 29 660 1662 60344106 60345120 0.000000e+00 1122.0
7 TraesCS4D01G225400 chr4A 94.118 255 12 2 1720 1971 65467389 65467643 4.150000e-103 385.0
8 TraesCS4D01G225400 chr1D 88.778 401 42 2 1257 1654 410490831 410490431 3.070000e-134 488.0
9 TraesCS4D01G225400 chr1D 88.235 408 45 2 1257 1661 410472002 410471595 3.980000e-133 484.0
10 TraesCS4D01G225400 chr1A 88.384 396 43 2 1262 1654 506489057 506488662 8.600000e-130 473.0
11 TraesCS4D01G225400 chr1A 88.161 397 44 2 1261 1654 506473911 506473515 1.110000e-128 470.0
12 TraesCS4D01G225400 chr3D 96.667 150 5 0 2436 2585 47242339 47242488 1.580000e-62 250.0
13 TraesCS4D01G225400 chr3D 96.000 150 6 0 2436 2585 287051175 287051026 7.340000e-61 244.0
14 TraesCS4D01G225400 chr3D 96.000 150 6 0 2436 2585 380952574 380952425 7.340000e-61 244.0
15 TraesCS4D01G225400 chr3D 96.000 150 6 0 2436 2585 449338372 449338521 7.340000e-61 244.0
16 TraesCS4D01G225400 chr7D 96.000 150 6 0 2436 2585 265253079 265253228 7.340000e-61 244.0
17 TraesCS4D01G225400 chr6D 96.000 150 6 0 2436 2585 461428747 461428896 7.340000e-61 244.0
18 TraesCS4D01G225400 chr6D 95.395 152 7 0 2436 2587 59189755 59189604 2.640000e-60 243.0
19 TraesCS4D01G225400 chr5D 96.000 150 6 0 2436 2585 44059129 44059278 7.340000e-61 244.0
20 TraesCS4D01G225400 chr5D 96.000 150 6 0 2436 2585 480474775 480474924 7.340000e-61 244.0
21 TraesCS4D01G225400 chr5D 95.000 60 3 0 2597 2656 74361630 74361571 7.830000e-16 95.3
22 TraesCS4D01G225400 chr2B 94.828 58 3 0 2597 2654 211197423 211197480 1.010000e-14 91.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G225400 chr4D 383782116 383784771 2655 False 4905.0 4905 100.000 1 2656 1 chr4D.!!$F1 2655
1 TraesCS4D01G225400 chr4D 402970948 402972111 1163 False 1223.0 1223 86.468 694 1808 1 chr4D.!!$F2 1114
2 TraesCS4D01G225400 chr4B 470971175 470973351 2176 False 1385.0 2638 94.121 1 1975 2 chr4B.!!$F2 1974
3 TraesCS4D01G225400 chr4B 499059603 499060653 1050 False 1061.0 1061 85.384 695 1739 1 chr4B.!!$F1 1044
4 TraesCS4D01G225400 chr4A 65465642 65467643 2001 False 1436.5 2488 93.512 1 1971 2 chr4A.!!$F2 1970
5 TraesCS4D01G225400 chr4A 60344106 60345120 1014 False 1122.0 1122 87.078 660 1662 1 chr4A.!!$F1 1002

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
944 974 0.177836 CACACAGTCACCAGTCACCA 59.822 55.0 0.0 0.0 0.0 4.17 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2105 2492 0.031111 ACCATAGCCTGCCTGTAGGA 60.031 55.0 5.38 0.0 40.42 2.94 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
194 195 5.994416 AGATCCTTTCCCCTTTTATGCTA 57.006 39.130 0.00 0.00 0.00 3.49
208 209 6.311200 CCTTTTATGCTATTGGTTTTCTGCAC 59.689 38.462 0.00 0.00 33.16 4.57
224 225 0.673644 GCACTGGGAGCGTGTATGTT 60.674 55.000 0.00 0.00 34.91 2.71
394 400 2.526304 TGGTTCTGGTTCAGTTCGAG 57.474 50.000 0.00 0.00 32.61 4.04
475 481 8.202745 ACGTACATAGTAGTACTCCAGTTAAC 57.797 38.462 5.96 0.00 41.65 2.01
494 500 1.107114 CTGTATCTGCCGTGAGAGGT 58.893 55.000 0.00 0.00 0.00 3.85
548 557 1.839424 ACATCTTGGTAGCCCTTTGC 58.161 50.000 0.00 0.00 41.71 3.68
569 578 2.103094 CCATCGTGCCTCTGGAATAGAA 59.897 50.000 0.00 0.00 34.32 2.10
616 625 4.109050 GTCTCTCTAATGGCTTCTCGTTG 58.891 47.826 0.00 0.00 0.00 4.10
637 646 1.153353 CTCGCGCCAAAAGACCTAAA 58.847 50.000 0.00 0.00 0.00 1.85
762 788 1.635817 GCCCTCTGCATGGTTCCCTA 61.636 60.000 0.00 0.00 40.77 3.53
764 790 0.471617 CCTCTGCATGGTTCCCTAGG 59.528 60.000 0.06 0.06 0.00 3.02
811 838 2.409975 TGCCTTACAACTTCTACACGC 58.590 47.619 0.00 0.00 0.00 5.34
895 925 4.576374 GTCCTCCCCGGGCCCTAT 62.576 72.222 22.43 0.00 0.00 2.57
896 926 2.788554 TCCTCCCCGGGCCCTATA 60.789 66.667 22.43 1.03 0.00 1.31
897 927 2.181773 TCCTCCCCGGGCCCTATAT 61.182 63.158 22.43 0.00 0.00 0.86
898 928 0.856767 TCCTCCCCGGGCCCTATATA 60.857 60.000 22.43 0.00 0.00 0.86
933 963 1.230635 ATCGGCAACAGCACACAGTC 61.231 55.000 0.00 0.00 0.00 3.51
938 968 0.659427 CAACAGCACACAGTCACCAG 59.341 55.000 0.00 0.00 0.00 4.00
939 969 0.253044 AACAGCACACAGTCACCAGT 59.747 50.000 0.00 0.00 0.00 4.00
940 970 0.179073 ACAGCACACAGTCACCAGTC 60.179 55.000 0.00 0.00 0.00 3.51
941 971 0.179076 CAGCACACAGTCACCAGTCA 60.179 55.000 0.00 0.00 0.00 3.41
942 972 0.179073 AGCACACAGTCACCAGTCAC 60.179 55.000 0.00 0.00 0.00 3.67
943 973 1.160329 GCACACAGTCACCAGTCACC 61.160 60.000 0.00 0.00 0.00 4.02
944 974 0.177836 CACACAGTCACCAGTCACCA 59.822 55.000 0.00 0.00 0.00 4.17
945 975 0.465705 ACACAGTCACCAGTCACCAG 59.534 55.000 0.00 0.00 0.00 4.00
959 990 1.068588 TCACCAGAGTCCACAACGAAG 59.931 52.381 0.00 0.00 0.00 3.79
1049 1080 4.164087 TGGTGCCACCGTCGTTGT 62.164 61.111 9.78 0.00 42.58 3.32
1244 1305 4.462417 AAGGAGACGACGAGCGCG 62.462 66.667 8.75 8.75 46.04 6.86
1316 1404 1.078426 CAAGGCTAACCCCTCGGTG 60.078 63.158 0.00 0.00 43.71 4.94
1472 1560 0.676782 GGTTGGGATGGTTCCTGACG 60.677 60.000 0.00 0.00 42.20 4.35
1478 1566 2.501223 GATGGTTCCTGACGACCGCA 62.501 60.000 0.00 0.00 38.81 5.69
1763 1931 5.753921 ACGTTCTGTAAGCCTTATCATTAGC 59.246 40.000 0.00 0.00 0.00 3.09
1845 2013 7.445945 GTTCATGCTAATACTCCCATTCTACT 58.554 38.462 0.00 0.00 0.00 2.57
1874 2045 9.264782 GACGCTTGCGTATTTTAAGTAATTTTA 57.735 29.630 20.67 0.00 0.00 1.52
1971 2358 4.392619 TGCAACGGTATAACTTTTGTCG 57.607 40.909 0.00 0.00 0.00 4.35
1975 2362 5.558653 GCAACGGTATAACTTTTGTCGTCAA 60.559 40.000 0.00 0.00 29.62 3.18
1976 2363 6.420588 CAACGGTATAACTTTTGTCGTCAAA 58.579 36.000 3.64 3.64 41.10 2.69
1977 2364 6.219302 ACGGTATAACTTTTGTCGTCAAAG 57.781 37.500 7.82 5.32 43.17 2.77
1978 2365 5.754890 ACGGTATAACTTTTGTCGTCAAAGT 59.245 36.000 7.82 5.89 43.17 2.66
1979 2366 6.068931 CGGTATAACTTTTGTCGTCAAAGTG 58.931 40.000 7.82 7.92 43.17 3.16
1980 2367 6.368213 GGTATAACTTTTGTCGTCAAAGTGG 58.632 40.000 7.82 5.84 43.17 4.00
1981 2368 6.203338 GGTATAACTTTTGTCGTCAAAGTGGA 59.797 38.462 7.82 2.43 43.17 4.02
1982 2369 6.877611 ATAACTTTTGTCGTCAAAGTGGAT 57.122 33.333 7.82 4.23 43.17 3.41
1983 2370 5.576447 AACTTTTGTCGTCAAAGTGGATT 57.424 34.783 7.82 0.00 43.17 3.01
1984 2371 4.920376 ACTTTTGTCGTCAAAGTGGATTG 58.080 39.130 7.82 0.00 43.17 2.67
1985 2372 3.347958 TTTGTCGTCAAAGTGGATTGC 57.652 42.857 3.64 0.00 38.44 3.56
1986 2373 1.234821 TGTCGTCAAAGTGGATTGCC 58.765 50.000 0.00 0.00 0.00 4.52
1987 2374 0.165944 GTCGTCAAAGTGGATTGCCG 59.834 55.000 0.00 0.00 36.79 5.69
1988 2375 0.953471 TCGTCAAAGTGGATTGCCGG 60.953 55.000 0.00 0.00 32.95 6.13
1989 2376 0.953471 CGTCAAAGTGGATTGCCGGA 60.953 55.000 5.05 0.00 36.79 5.14
1990 2377 0.521735 GTCAAAGTGGATTGCCGGAC 59.478 55.000 5.05 0.00 36.79 4.79
1991 2378 0.953471 TCAAAGTGGATTGCCGGACG 60.953 55.000 5.05 0.00 36.79 4.79
1992 2379 0.953471 CAAAGTGGATTGCCGGACGA 60.953 55.000 5.05 0.00 36.79 4.20
1993 2380 0.035439 AAAGTGGATTGCCGGACGAT 60.035 50.000 5.05 1.15 36.79 3.73
1994 2381 0.035439 AAGTGGATTGCCGGACGATT 60.035 50.000 5.05 0.00 36.79 3.34
1995 2382 0.462047 AGTGGATTGCCGGACGATTC 60.462 55.000 5.05 1.04 36.79 2.52
1996 2383 0.742990 GTGGATTGCCGGACGATTCA 60.743 55.000 5.05 4.12 36.79 2.57
1997 2384 0.461870 TGGATTGCCGGACGATTCAG 60.462 55.000 5.05 0.00 36.79 3.02
1998 2385 1.160329 GGATTGCCGGACGATTCAGG 61.160 60.000 5.05 0.00 39.96 3.86
2002 2389 2.582498 CCGGACGATTCAGGCGAC 60.582 66.667 0.00 0.00 29.56 5.19
2003 2390 2.490217 CGGACGATTCAGGCGACT 59.510 61.111 0.00 0.00 46.44 4.18
2004 2391 1.153823 CGGACGATTCAGGCGACTT 60.154 57.895 0.00 0.00 40.21 3.01
2005 2392 1.140407 CGGACGATTCAGGCGACTTC 61.140 60.000 0.00 0.00 40.21 3.01
2006 2393 0.173708 GGACGATTCAGGCGACTTCT 59.826 55.000 0.00 0.00 40.21 2.85
2007 2394 1.551145 GACGATTCAGGCGACTTCTC 58.449 55.000 0.00 0.00 40.21 2.87
2008 2395 0.173708 ACGATTCAGGCGACTTCTCC 59.826 55.000 0.00 0.00 40.21 3.71
2009 2396 0.867753 CGATTCAGGCGACTTCTCCG 60.868 60.000 0.00 0.00 40.21 4.63
2010 2397 0.528684 GATTCAGGCGACTTCTCCGG 60.529 60.000 0.00 0.00 40.21 5.14
2011 2398 1.258445 ATTCAGGCGACTTCTCCGGT 61.258 55.000 0.00 0.00 40.21 5.28
2012 2399 2.125912 CAGGCGACTTCTCCGGTG 60.126 66.667 0.00 0.00 40.21 4.94
2013 2400 3.382832 AGGCGACTTCTCCGGTGG 61.383 66.667 0.00 0.00 37.44 4.61
2014 2401 3.379445 GGCGACTTCTCCGGTGGA 61.379 66.667 0.00 0.00 0.00 4.02
2022 2409 2.503061 CTCCGGTGGAGGATGCTG 59.497 66.667 0.00 0.00 45.43 4.41
2023 2410 3.083349 TCCGGTGGAGGATGCTGG 61.083 66.667 0.00 0.00 34.92 4.85
2024 2411 4.864334 CCGGTGGAGGATGCTGGC 62.864 72.222 0.00 0.00 0.00 4.85
2025 2412 4.100084 CGGTGGAGGATGCTGGCA 62.100 66.667 0.00 0.00 0.00 4.92
2026 2413 2.124403 GGTGGAGGATGCTGGCAG 60.124 66.667 10.94 10.94 0.00 4.85
2027 2414 2.124403 GTGGAGGATGCTGGCAGG 60.124 66.667 17.64 0.00 0.00 4.85
2028 2415 2.611800 TGGAGGATGCTGGCAGGT 60.612 61.111 17.64 0.00 0.00 4.00
2029 2416 2.233566 TGGAGGATGCTGGCAGGTT 61.234 57.895 17.64 0.00 0.00 3.50
2030 2417 1.000396 GGAGGATGCTGGCAGGTTT 60.000 57.895 17.64 0.00 0.00 3.27
2031 2418 0.613012 GGAGGATGCTGGCAGGTTTT 60.613 55.000 17.64 0.00 0.00 2.43
2032 2419 0.529378 GAGGATGCTGGCAGGTTTTG 59.471 55.000 17.64 0.00 0.00 2.44
2044 2431 2.049435 GGTTTTGCCTTGGACCAGG 58.951 57.895 0.00 0.00 36.95 4.45
2045 2432 1.471829 GGTTTTGCCTTGGACCAGGG 61.472 60.000 18.34 18.34 34.01 4.45
2046 2433 1.152355 TTTTGCCTTGGACCAGGGG 60.152 57.895 23.29 16.29 34.01 4.79
2047 2434 3.826265 TTTGCCTTGGACCAGGGGC 62.826 63.158 23.29 24.24 44.31 5.80
2050 2437 3.966543 CCTTGGACCAGGGGCGTT 61.967 66.667 14.99 0.00 0.00 4.84
2051 2438 2.359975 CTTGGACCAGGGGCGTTC 60.360 66.667 0.00 0.00 0.00 3.95
2052 2439 4.323477 TTGGACCAGGGGCGTTCG 62.323 66.667 0.00 0.00 0.00 3.95
2058 2445 4.452733 CAGGGGCGTTCGGGACTC 62.453 72.222 0.00 0.00 0.00 3.36
2094 2481 2.740826 GCAGTCCGGCGCTTACAA 60.741 61.111 7.64 0.00 0.00 2.41
2095 2482 2.106683 GCAGTCCGGCGCTTACAAT 61.107 57.895 7.64 0.00 0.00 2.71
2096 2483 1.715585 CAGTCCGGCGCTTACAATG 59.284 57.895 7.64 0.00 0.00 2.82
2097 2484 1.449601 AGTCCGGCGCTTACAATGG 60.450 57.895 7.64 0.00 0.00 3.16
2098 2485 1.448893 GTCCGGCGCTTACAATGGA 60.449 57.895 7.64 0.64 0.00 3.41
2099 2486 1.153449 TCCGGCGCTTACAATGGAG 60.153 57.895 7.64 0.00 0.00 3.86
2100 2487 2.180204 CCGGCGCTTACAATGGAGG 61.180 63.158 7.64 0.00 0.00 4.30
2101 2488 1.449601 CGGCGCTTACAATGGAGGT 60.450 57.895 7.64 0.00 0.00 3.85
2102 2489 1.429148 CGGCGCTTACAATGGAGGTC 61.429 60.000 7.64 0.00 0.00 3.85
2103 2490 1.429148 GGCGCTTACAATGGAGGTCG 61.429 60.000 7.64 0.00 0.00 4.79
2104 2491 0.459585 GCGCTTACAATGGAGGTCGA 60.460 55.000 0.00 0.00 0.00 4.20
2105 2492 1.806623 GCGCTTACAATGGAGGTCGAT 60.807 52.381 0.00 0.00 0.00 3.59
2106 2493 2.128035 CGCTTACAATGGAGGTCGATC 58.872 52.381 0.00 0.00 0.00 3.69
2107 2494 2.484889 GCTTACAATGGAGGTCGATCC 58.515 52.381 0.00 0.00 40.03 3.36
2116 2503 2.814023 AGGTCGATCCTACAGGCAG 58.186 57.895 4.93 0.00 46.10 4.85
2117 2504 0.757188 AGGTCGATCCTACAGGCAGG 60.757 60.000 4.93 0.00 46.10 4.85
2118 2505 1.068250 GTCGATCCTACAGGCAGGC 59.932 63.158 0.00 0.00 35.49 4.85
2119 2506 1.075970 TCGATCCTACAGGCAGGCT 60.076 57.895 0.00 0.00 35.49 4.58
2120 2507 0.185175 TCGATCCTACAGGCAGGCTA 59.815 55.000 0.00 0.00 35.49 3.93
2121 2508 1.203063 TCGATCCTACAGGCAGGCTAT 60.203 52.381 0.00 0.00 35.49 2.97
2122 2509 1.067283 CGATCCTACAGGCAGGCTATG 60.067 57.143 0.00 0.00 35.49 2.23
2123 2510 1.277557 GATCCTACAGGCAGGCTATGG 59.722 57.143 0.00 0.00 35.49 2.74
2124 2511 0.031111 TCCTACAGGCAGGCTATGGT 60.031 55.000 0.00 0.00 35.49 3.55
2125 2512 0.107456 CCTACAGGCAGGCTATGGTG 59.893 60.000 0.00 0.00 0.00 4.17
2126 2513 0.107456 CTACAGGCAGGCTATGGTGG 59.893 60.000 0.00 0.00 0.00 4.61
2127 2514 0.326143 TACAGGCAGGCTATGGTGGA 60.326 55.000 0.00 0.00 0.00 4.02
2128 2515 0.990282 ACAGGCAGGCTATGGTGGAT 60.990 55.000 0.00 0.00 0.00 3.41
2129 2516 1.059098 CAGGCAGGCTATGGTGGATA 58.941 55.000 0.00 0.00 0.00 2.59
2130 2517 1.002888 CAGGCAGGCTATGGTGGATAG 59.997 57.143 0.00 0.00 37.67 2.08
2131 2518 1.132721 AGGCAGGCTATGGTGGATAGA 60.133 52.381 0.00 0.00 36.84 1.98
2132 2519 1.699634 GGCAGGCTATGGTGGATAGAA 59.300 52.381 0.00 0.00 36.84 2.10
2133 2520 2.307098 GGCAGGCTATGGTGGATAGAAT 59.693 50.000 0.00 0.00 36.84 2.40
2134 2521 3.604582 GCAGGCTATGGTGGATAGAATC 58.395 50.000 0.00 0.00 36.84 2.52
2135 2522 3.854666 CAGGCTATGGTGGATAGAATCG 58.145 50.000 0.00 0.00 36.84 3.34
2136 2523 2.834549 AGGCTATGGTGGATAGAATCGG 59.165 50.000 0.00 0.00 36.84 4.18
2137 2524 2.093447 GGCTATGGTGGATAGAATCGGG 60.093 54.545 0.00 0.00 36.84 5.14
2138 2525 2.678190 GCTATGGTGGATAGAATCGGGC 60.678 54.545 0.00 0.00 36.84 6.13
2139 2526 0.693049 ATGGTGGATAGAATCGGGCC 59.307 55.000 0.00 0.00 0.00 5.80
2140 2527 1.375326 GGTGGATAGAATCGGGCCC 59.625 63.158 13.57 13.57 0.00 5.80
2141 2528 1.128188 GGTGGATAGAATCGGGCCCT 61.128 60.000 22.43 0.00 0.00 5.19
2142 2529 0.321996 GTGGATAGAATCGGGCCCTC 59.678 60.000 22.43 11.27 0.00 4.30
2143 2530 0.105194 TGGATAGAATCGGGCCCTCA 60.105 55.000 22.43 6.46 0.00 3.86
2144 2531 0.610687 GGATAGAATCGGGCCCTCAG 59.389 60.000 22.43 4.11 0.00 3.35
2145 2532 1.633774 GATAGAATCGGGCCCTCAGA 58.366 55.000 22.43 10.71 0.00 3.27
2146 2533 1.273886 GATAGAATCGGGCCCTCAGAC 59.726 57.143 22.43 7.48 0.00 3.51
2147 2534 0.261991 TAGAATCGGGCCCTCAGACT 59.738 55.000 22.43 14.55 0.00 3.24
2148 2535 1.144936 GAATCGGGCCCTCAGACTG 59.855 63.158 22.43 1.43 0.00 3.51
2149 2536 2.317149 GAATCGGGCCCTCAGACTGG 62.317 65.000 22.43 0.54 0.00 4.00
2154 2541 3.221222 GCCCTCAGACTGGCGTAT 58.779 61.111 1.81 0.00 38.00 3.06
2155 2542 1.522569 GCCCTCAGACTGGCGTATT 59.477 57.895 1.81 0.00 38.00 1.89
2156 2543 0.530870 GCCCTCAGACTGGCGTATTC 60.531 60.000 1.81 0.00 38.00 1.75
2157 2544 0.105039 CCCTCAGACTGGCGTATTCC 59.895 60.000 1.81 0.00 0.00 3.01
2158 2545 1.115467 CCTCAGACTGGCGTATTCCT 58.885 55.000 1.81 0.00 0.00 3.36
2159 2546 1.202463 CCTCAGACTGGCGTATTCCTG 60.202 57.143 1.81 0.00 0.00 3.86
2160 2547 0.175760 TCAGACTGGCGTATTCCTGC 59.824 55.000 1.81 0.00 0.00 4.85
2161 2548 1.141881 AGACTGGCGTATTCCTGCG 59.858 57.895 0.00 0.00 0.00 5.18
2162 2549 1.141019 GACTGGCGTATTCCTGCGA 59.859 57.895 0.00 0.00 31.48 5.10
2163 2550 0.249489 GACTGGCGTATTCCTGCGAT 60.249 55.000 0.00 0.00 31.48 4.58
2164 2551 0.530650 ACTGGCGTATTCCTGCGATG 60.531 55.000 0.00 0.00 31.48 3.84
2165 2552 1.224069 CTGGCGTATTCCTGCGATGG 61.224 60.000 0.00 0.00 31.48 3.51
2166 2553 1.961277 GGCGTATTCCTGCGATGGG 60.961 63.158 0.00 0.00 31.48 4.00
2167 2554 2.607892 GCGTATTCCTGCGATGGGC 61.608 63.158 0.00 0.00 43.96 5.36
2176 2563 2.192979 GCGATGGGCATTGGAGGA 59.807 61.111 0.00 0.00 42.87 3.71
2177 2564 1.895707 GCGATGGGCATTGGAGGAG 60.896 63.158 0.00 0.00 42.87 3.69
2178 2565 1.832219 CGATGGGCATTGGAGGAGA 59.168 57.895 0.00 0.00 0.00 3.71
2179 2566 0.250209 CGATGGGCATTGGAGGAGAG 60.250 60.000 0.00 0.00 0.00 3.20
2180 2567 1.135094 GATGGGCATTGGAGGAGAGA 58.865 55.000 0.00 0.00 0.00 3.10
2181 2568 1.704070 GATGGGCATTGGAGGAGAGAT 59.296 52.381 0.00 0.00 0.00 2.75
2182 2569 0.841961 TGGGCATTGGAGGAGAGATG 59.158 55.000 0.00 0.00 0.00 2.90
2183 2570 0.536915 GGGCATTGGAGGAGAGATGC 60.537 60.000 0.00 0.00 43.06 3.91
2184 2571 3.018479 GCATTGGAGGAGAGATGCC 57.982 57.895 0.00 0.00 39.08 4.40
2185 2572 0.182061 GCATTGGAGGAGAGATGCCA 59.818 55.000 0.00 0.00 39.08 4.92
2186 2573 1.814634 GCATTGGAGGAGAGATGCCAG 60.815 57.143 0.00 0.00 39.08 4.85
2187 2574 0.473326 ATTGGAGGAGAGATGCCAGC 59.527 55.000 0.00 0.00 0.00 4.85
2188 2575 1.630126 TTGGAGGAGAGATGCCAGCC 61.630 60.000 0.00 0.00 0.00 4.85
2189 2576 2.817056 GGAGGAGAGATGCCAGCCC 61.817 68.421 0.00 0.00 0.00 5.19
2190 2577 2.771762 AGGAGAGATGCCAGCCCC 60.772 66.667 0.00 0.00 0.00 5.80
2191 2578 4.247380 GGAGAGATGCCAGCCCCG 62.247 72.222 0.00 0.00 0.00 5.73
2192 2579 4.247380 GAGAGATGCCAGCCCCGG 62.247 72.222 0.00 0.00 0.00 5.73
2245 2632 4.854924 CCATCGATGCCACCGCCA 62.855 66.667 20.25 0.00 0.00 5.69
2246 2633 3.274586 CATCGATGCCACCGCCAG 61.275 66.667 13.37 0.00 0.00 4.85
2247 2634 3.469970 ATCGATGCCACCGCCAGA 61.470 61.111 0.00 0.00 0.00 3.86
2248 2635 3.740128 ATCGATGCCACCGCCAGAC 62.740 63.158 0.00 0.00 0.00 3.51
2249 2636 4.758251 CGATGCCACCGCCAGACA 62.758 66.667 0.00 0.00 0.00 3.41
2250 2637 3.127533 GATGCCACCGCCAGACAC 61.128 66.667 0.00 0.00 0.00 3.67
2251 2638 3.899981 GATGCCACCGCCAGACACA 62.900 63.158 0.00 0.00 0.00 3.72
2252 2639 4.927782 TGCCACCGCCAGACACAC 62.928 66.667 0.00 0.00 0.00 3.82
2265 2652 4.514577 CACACGGGCGCCTCCTAG 62.515 72.222 28.56 14.89 34.39 3.02
2266 2653 4.753662 ACACGGGCGCCTCCTAGA 62.754 66.667 28.56 0.00 34.39 2.43
2267 2654 3.458163 CACGGGCGCCTCCTAGAA 61.458 66.667 28.56 0.00 34.39 2.10
2268 2655 2.444140 ACGGGCGCCTCCTAGAAT 60.444 61.111 28.56 0.00 34.39 2.40
2269 2656 2.340443 CGGGCGCCTCCTAGAATC 59.660 66.667 28.56 4.75 34.39 2.52
2270 2657 2.498941 CGGGCGCCTCCTAGAATCA 61.499 63.158 28.56 0.00 34.39 2.57
2271 2658 1.069935 GGGCGCCTCCTAGAATCAC 59.930 63.158 28.56 0.00 34.39 3.06
2272 2659 1.403687 GGGCGCCTCCTAGAATCACT 61.404 60.000 28.56 0.00 34.39 3.41
2273 2660 0.249657 GGCGCCTCCTAGAATCACTG 60.250 60.000 22.15 0.00 0.00 3.66
2274 2661 0.249657 GCGCCTCCTAGAATCACTGG 60.250 60.000 0.00 0.00 0.00 4.00
2275 2662 1.403814 CGCCTCCTAGAATCACTGGA 58.596 55.000 0.00 0.00 0.00 3.86
2276 2663 1.339610 CGCCTCCTAGAATCACTGGAG 59.660 57.143 8.52 8.52 40.37 3.86
2277 2664 1.069978 GCCTCCTAGAATCACTGGAGC 59.930 57.143 9.57 4.03 39.88 4.70
2278 2665 2.392662 CCTCCTAGAATCACTGGAGCA 58.607 52.381 9.57 0.00 39.88 4.26
2279 2666 2.364970 CCTCCTAGAATCACTGGAGCAG 59.635 54.545 9.57 0.00 39.88 4.24
2280 2667 2.364970 CTCCTAGAATCACTGGAGCAGG 59.635 54.545 0.00 0.00 37.23 4.85
2281 2668 2.023984 TCCTAGAATCACTGGAGCAGGA 60.024 50.000 0.00 0.00 35.51 3.86
2282 2669 2.364970 CCTAGAATCACTGGAGCAGGAG 59.635 54.545 0.00 0.00 35.51 3.69
2283 2670 2.244486 AGAATCACTGGAGCAGGAGA 57.756 50.000 0.00 0.00 35.51 3.71
2284 2671 2.761809 AGAATCACTGGAGCAGGAGAT 58.238 47.619 0.00 0.00 35.51 2.75
2285 2672 2.699846 AGAATCACTGGAGCAGGAGATC 59.300 50.000 0.00 0.00 35.51 2.75
2286 2673 1.039068 ATCACTGGAGCAGGAGATCG 58.961 55.000 0.00 0.00 35.51 3.69
2287 2674 1.227205 CACTGGAGCAGGAGATCGC 60.227 63.158 0.00 0.00 35.51 4.58
2288 2675 1.683707 ACTGGAGCAGGAGATCGCA 60.684 57.895 0.00 0.00 35.51 5.10
2289 2676 1.067749 CTGGAGCAGGAGATCGCAG 59.932 63.158 0.00 0.00 0.00 5.18
2290 2677 2.280052 GGAGCAGGAGATCGCAGC 60.280 66.667 0.00 1.84 0.00 5.25
2291 2678 2.498248 GAGCAGGAGATCGCAGCA 59.502 61.111 13.77 0.00 0.00 4.41
2292 2679 1.882167 GAGCAGGAGATCGCAGCAC 60.882 63.158 13.77 5.60 0.00 4.40
2293 2680 2.894387 GCAGGAGATCGCAGCACC 60.894 66.667 7.96 0.00 0.00 5.01
2294 2681 2.580815 CAGGAGATCGCAGCACCA 59.419 61.111 0.00 0.00 0.00 4.17
2295 2682 1.812922 CAGGAGATCGCAGCACCAC 60.813 63.158 0.00 0.00 0.00 4.16
2296 2683 1.986757 AGGAGATCGCAGCACCACT 60.987 57.895 0.00 0.00 0.00 4.00
2304 2691 2.113774 CAGCACCACTGGAAGGCA 59.886 61.111 0.71 0.00 43.19 4.75
2305 2692 1.970114 CAGCACCACTGGAAGGCAG 60.970 63.158 0.71 0.00 43.19 4.85
2306 2693 2.674380 GCACCACTGGAAGGCAGG 60.674 66.667 0.71 0.00 39.30 4.85
2307 2694 2.674380 CACCACTGGAAGGCAGGC 60.674 66.667 0.71 0.00 39.30 4.85
2308 2695 4.335647 ACCACTGGAAGGCAGGCG 62.336 66.667 0.71 0.00 39.30 5.52
2328 2715 4.293648 CACACGAGCCACACGGGA 62.294 66.667 0.00 0.00 40.01 5.14
2329 2716 3.311110 ACACGAGCCACACGGGAT 61.311 61.111 0.00 0.00 40.01 3.85
2336 2723 3.770040 CCACACGGGATCTGGCGA 61.770 66.667 0.00 0.00 40.01 5.54
2337 2724 2.264480 CACACGGGATCTGGCGAA 59.736 61.111 0.00 0.00 0.00 4.70
2338 2725 1.153369 CACACGGGATCTGGCGAAT 60.153 57.895 0.00 0.00 0.00 3.34
2339 2726 1.153369 ACACGGGATCTGGCGAATG 60.153 57.895 0.00 0.00 0.00 2.67
2340 2727 2.203070 ACGGGATCTGGCGAATGC 60.203 61.111 0.00 0.00 41.71 3.56
2362 2749 2.901042 CCTCCCGTTAGGCCAGTC 59.099 66.667 5.01 0.00 35.76 3.51
2363 2750 1.987855 CCTCCCGTTAGGCCAGTCA 60.988 63.158 5.01 0.00 35.76 3.41
2364 2751 1.550130 CCTCCCGTTAGGCCAGTCAA 61.550 60.000 5.01 0.00 35.76 3.18
2365 2752 0.391263 CTCCCGTTAGGCCAGTCAAC 60.391 60.000 5.01 2.30 35.76 3.18
2366 2753 1.122632 TCCCGTTAGGCCAGTCAACA 61.123 55.000 5.01 0.00 35.76 3.33
2367 2754 0.250553 CCCGTTAGGCCAGTCAACAA 60.251 55.000 5.01 0.00 35.76 2.83
2368 2755 0.872388 CCGTTAGGCCAGTCAACAAC 59.128 55.000 5.01 0.00 0.00 3.32
2369 2756 0.872388 CGTTAGGCCAGTCAACAACC 59.128 55.000 5.01 0.00 0.00 3.77
2370 2757 1.812324 CGTTAGGCCAGTCAACAACCA 60.812 52.381 5.01 0.00 0.00 3.67
2371 2758 1.880027 GTTAGGCCAGTCAACAACCAG 59.120 52.381 5.01 0.00 0.00 4.00
2372 2759 0.400213 TAGGCCAGTCAACAACCAGG 59.600 55.000 5.01 0.00 0.00 4.45
2373 2760 1.152756 GGCCAGTCAACAACCAGGT 60.153 57.895 0.00 0.00 0.00 4.00
2374 2761 1.455383 GGCCAGTCAACAACCAGGTG 61.455 60.000 0.00 0.00 35.78 4.00
2375 2762 2.032981 CCAGTCAACAACCAGGTGC 58.967 57.895 0.00 0.00 33.90 5.01
2376 2763 0.751277 CCAGTCAACAACCAGGTGCA 60.751 55.000 0.00 0.00 33.90 4.57
2377 2764 0.664761 CAGTCAACAACCAGGTGCAG 59.335 55.000 0.00 0.00 33.90 4.41
2378 2765 0.466189 AGTCAACAACCAGGTGCAGG 60.466 55.000 0.00 0.00 33.90 4.85
2379 2766 0.751643 GTCAACAACCAGGTGCAGGT 60.752 55.000 0.00 0.00 42.34 4.00
2380 2767 0.751277 TCAACAACCAGGTGCAGGTG 60.751 55.000 0.00 0.00 39.86 4.00
2381 2768 1.455587 AACAACCAGGTGCAGGTGG 60.456 57.895 11.98 11.98 39.86 4.61
2382 2769 3.297620 CAACCAGGTGCAGGTGGC 61.298 66.667 13.25 0.00 39.86 5.01
2383 2770 4.603535 AACCAGGTGCAGGTGGCC 62.604 66.667 13.25 0.00 43.89 5.36
2386 2773 4.371417 CAGGTGCAGGTGGCCCAT 62.371 66.667 0.00 0.00 43.89 4.00
2387 2774 4.052518 AGGTGCAGGTGGCCCATC 62.053 66.667 0.00 0.00 43.89 3.51
2388 2775 4.052518 GGTGCAGGTGGCCCATCT 62.053 66.667 0.00 0.00 43.89 2.90
2389 2776 2.753043 GTGCAGGTGGCCCATCTG 60.753 66.667 20.11 20.11 44.62 2.90
2390 2777 4.051167 TGCAGGTGGCCCATCTGG 62.051 66.667 25.03 7.55 42.32 3.86
2391 2778 3.731728 GCAGGTGGCCCATCTGGA 61.732 66.667 25.03 0.00 42.32 3.86
2392 2779 2.273449 CAGGTGGCCCATCTGGAC 59.727 66.667 16.70 0.00 45.71 4.02
2393 2780 3.017581 AGGTGGCCCATCTGGACC 61.018 66.667 0.00 0.00 44.34 4.46
2394 2781 4.129148 GGTGGCCCATCTGGACCC 62.129 72.222 0.00 0.00 44.34 4.46
2395 2782 3.338250 GTGGCCCATCTGGACCCA 61.338 66.667 0.00 2.24 44.34 4.51
2396 2783 3.338250 TGGCCCATCTGGACCCAC 61.338 66.667 0.00 0.00 44.34 4.61
2397 2784 4.129148 GGCCCATCTGGACCCACC 62.129 72.222 0.00 0.00 35.25 4.61
2398 2785 4.489771 GCCCATCTGGACCCACCG 62.490 72.222 0.00 0.00 42.61 4.94
2399 2786 3.797353 CCCATCTGGACCCACCGG 61.797 72.222 0.00 0.00 45.93 5.28
2438 2825 4.408821 GGGCTGATGCGGTGGACA 62.409 66.667 0.00 0.00 40.82 4.02
2439 2826 2.359850 GGCTGATGCGGTGGACAA 60.360 61.111 0.00 0.00 40.82 3.18
2440 2827 1.971167 GGCTGATGCGGTGGACAAA 60.971 57.895 0.00 0.00 40.82 2.83
2441 2828 1.315257 GGCTGATGCGGTGGACAAAT 61.315 55.000 0.00 0.00 40.82 2.32
2442 2829 0.527565 GCTGATGCGGTGGACAAATT 59.472 50.000 0.00 0.00 0.00 1.82
2443 2830 1.067635 GCTGATGCGGTGGACAAATTT 60.068 47.619 0.00 0.00 0.00 1.82
2444 2831 2.598589 CTGATGCGGTGGACAAATTTG 58.401 47.619 16.67 16.67 0.00 2.32
2445 2832 2.228582 CTGATGCGGTGGACAAATTTGA 59.771 45.455 24.64 0.00 0.00 2.69
2446 2833 2.030363 TGATGCGGTGGACAAATTTGAC 60.030 45.455 24.64 17.82 0.00 3.18
2447 2834 0.671251 TGCGGTGGACAAATTTGACC 59.329 50.000 26.48 26.48 42.19 4.02
2448 2835 0.958822 GCGGTGGACAAATTTGACCT 59.041 50.000 30.62 9.90 42.31 3.85
2449 2836 2.156098 GCGGTGGACAAATTTGACCTA 58.844 47.619 30.62 18.98 42.31 3.08
2450 2837 2.752903 GCGGTGGACAAATTTGACCTAT 59.247 45.455 30.62 9.22 42.31 2.57
2451 2838 3.427503 GCGGTGGACAAATTTGACCTATG 60.428 47.826 30.62 22.49 42.31 2.23
2452 2839 3.128589 CGGTGGACAAATTTGACCTATGG 59.871 47.826 30.62 18.01 42.31 2.74
2453 2840 4.340617 GGTGGACAAATTTGACCTATGGA 58.659 43.478 30.62 14.47 42.31 3.41
2454 2841 4.157840 GGTGGACAAATTTGACCTATGGAC 59.842 45.833 30.62 22.32 42.31 4.02
2455 2842 4.157840 GTGGACAAATTTGACCTATGGACC 59.842 45.833 30.62 16.45 42.31 4.46
2456 2843 4.202620 TGGACAAATTTGACCTATGGACCA 60.203 41.667 30.62 18.11 42.31 4.02
2457 2844 4.770010 GGACAAATTTGACCTATGGACCAA 59.230 41.667 26.10 0.00 39.42 3.67
2458 2845 5.245075 GGACAAATTTGACCTATGGACCAAA 59.755 40.000 26.10 9.67 39.42 3.28
2459 2846 6.070824 GGACAAATTTGACCTATGGACCAAAT 60.071 38.462 26.10 12.17 39.22 2.32
2460 2847 6.700352 ACAAATTTGACCTATGGACCAAATG 58.300 36.000 24.64 11.51 38.41 2.32
2461 2848 6.496565 ACAAATTTGACCTATGGACCAAATGA 59.503 34.615 24.64 0.00 38.41 2.57
2462 2849 7.016072 ACAAATTTGACCTATGGACCAAATGAA 59.984 33.333 24.64 0.00 38.41 2.57
2463 2850 7.552050 AATTTGACCTATGGACCAAATGAAA 57.448 32.000 0.00 0.00 38.41 2.69
2464 2851 7.738437 ATTTGACCTATGGACCAAATGAAAT 57.262 32.000 0.00 0.00 37.72 2.17
2465 2852 6.773976 TTGACCTATGGACCAAATGAAATC 57.226 37.500 0.00 0.00 0.00 2.17
2466 2853 5.825532 TGACCTATGGACCAAATGAAATCA 58.174 37.500 0.00 0.00 0.00 2.57
2467 2854 5.652014 TGACCTATGGACCAAATGAAATCAC 59.348 40.000 0.00 0.00 0.00 3.06
2468 2855 5.579047 ACCTATGGACCAAATGAAATCACA 58.421 37.500 0.00 0.00 0.00 3.58
2469 2856 6.015918 ACCTATGGACCAAATGAAATCACAA 58.984 36.000 0.00 0.00 0.00 3.33
2470 2857 6.496565 ACCTATGGACCAAATGAAATCACAAA 59.503 34.615 0.00 0.00 0.00 2.83
2471 2858 7.016072 ACCTATGGACCAAATGAAATCACAAAA 59.984 33.333 0.00 0.00 0.00 2.44
2472 2859 8.042515 CCTATGGACCAAATGAAATCACAAAAT 58.957 33.333 0.00 0.00 0.00 1.82
2473 2860 7.675962 ATGGACCAAATGAAATCACAAAATG 57.324 32.000 0.00 0.00 0.00 2.32
2474 2861 6.824553 TGGACCAAATGAAATCACAAAATGA 58.175 32.000 0.00 0.00 43.13 2.57
2475 2862 7.278135 TGGACCAAATGAAATCACAAAATGAA 58.722 30.769 0.00 0.00 41.93 2.57
2476 2863 7.226325 TGGACCAAATGAAATCACAAAATGAAC 59.774 33.333 0.00 0.00 41.93 3.18
2477 2864 7.442062 GGACCAAATGAAATCACAAAATGAACT 59.558 33.333 0.00 0.00 41.93 3.01
2478 2865 8.145316 ACCAAATGAAATCACAAAATGAACTG 57.855 30.769 0.00 0.00 41.93 3.16
2479 2866 7.769970 ACCAAATGAAATCACAAAATGAACTGT 59.230 29.630 0.00 0.00 41.93 3.55
2480 2867 8.277713 CCAAATGAAATCACAAAATGAACTGTC 58.722 33.333 0.00 0.00 41.93 3.51
2481 2868 7.951530 AATGAAATCACAAAATGAACTGTCC 57.048 32.000 0.00 0.00 41.93 4.02
2482 2869 5.518812 TGAAATCACAAAATGAACTGTCCG 58.481 37.500 0.00 0.00 41.93 4.79
2483 2870 5.067153 TGAAATCACAAAATGAACTGTCCGT 59.933 36.000 0.00 0.00 41.93 4.69
2484 2871 3.961477 TCACAAAATGAACTGTCCGTG 57.039 42.857 0.00 0.00 33.02 4.94
2485 2872 3.536570 TCACAAAATGAACTGTCCGTGA 58.463 40.909 0.00 0.00 33.02 4.35
2486 2873 3.942115 TCACAAAATGAACTGTCCGTGAA 59.058 39.130 0.00 0.00 33.02 3.18
2487 2874 4.396478 TCACAAAATGAACTGTCCGTGAAA 59.604 37.500 0.00 0.00 33.02 2.69
2488 2875 4.499040 CACAAAATGAACTGTCCGTGAAAC 59.501 41.667 0.00 0.00 0.00 2.78
2489 2876 4.398044 ACAAAATGAACTGTCCGTGAAACT 59.602 37.500 0.00 0.00 31.75 2.66
2490 2877 5.587043 ACAAAATGAACTGTCCGTGAAACTA 59.413 36.000 0.00 0.00 31.75 2.24
2491 2878 6.262273 ACAAAATGAACTGTCCGTGAAACTAT 59.738 34.615 0.00 0.00 31.75 2.12
2492 2879 6.877611 AAATGAACTGTCCGTGAAACTATT 57.122 33.333 0.00 0.00 31.75 1.73
2493 2880 6.877611 AATGAACTGTCCGTGAAACTATTT 57.122 33.333 0.00 0.00 31.75 1.40
2494 2881 5.917541 TGAACTGTCCGTGAAACTATTTC 57.082 39.130 0.00 0.00 40.08 2.17
2495 2882 5.361427 TGAACTGTCCGTGAAACTATTTCA 58.639 37.500 0.00 0.00 46.68 2.69
2502 2889 1.803334 TGAAACTATTTCACGCGGCT 58.197 45.000 12.47 0.00 44.21 5.52
2503 2890 1.463056 TGAAACTATTTCACGCGGCTG 59.537 47.619 12.47 0.00 44.21 4.85
2504 2891 1.730064 GAAACTATTTCACGCGGCTGA 59.270 47.619 12.47 2.44 39.45 4.26
2505 2892 1.076332 AACTATTTCACGCGGCTGAC 58.924 50.000 12.47 0.00 0.00 3.51
2506 2893 0.246635 ACTATTTCACGCGGCTGACT 59.753 50.000 12.47 0.00 0.00 3.41
2507 2894 1.337823 ACTATTTCACGCGGCTGACTT 60.338 47.619 12.47 0.00 0.00 3.01
2508 2895 1.732259 CTATTTCACGCGGCTGACTTT 59.268 47.619 12.47 0.00 0.00 2.66
2509 2896 0.951558 ATTTCACGCGGCTGACTTTT 59.048 45.000 12.47 0.00 0.00 2.27
2510 2897 0.736053 TTTCACGCGGCTGACTTTTT 59.264 45.000 12.47 0.00 0.00 1.94
2524 2911 4.220413 TTTTTGTGTGACGCCCGA 57.780 50.000 0.00 0.00 0.00 5.14
2525 2912 1.722677 TTTTTGTGTGACGCCCGAC 59.277 52.632 0.00 0.00 0.00 4.79
2526 2913 1.025113 TTTTTGTGTGACGCCCGACA 61.025 50.000 0.00 0.00 0.00 4.35
2527 2914 1.707239 TTTTGTGTGACGCCCGACAC 61.707 55.000 14.47 14.47 42.40 3.67
2528 2915 4.934942 TGTGTGACGCCCGACACG 62.935 66.667 15.80 0.00 44.55 4.49
2529 2916 4.634133 GTGTGACGCCCGACACGA 62.634 66.667 15.80 5.46 42.06 4.35
2530 2917 3.902086 TGTGACGCCCGACACGAA 61.902 61.111 15.80 0.31 42.06 3.85
2531 2918 3.103911 GTGACGCCCGACACGAAG 61.104 66.667 7.43 0.00 32.16 3.79
2532 2919 4.351938 TGACGCCCGACACGAAGG 62.352 66.667 0.00 0.00 0.00 3.46
2540 2927 2.742372 GACACGAAGGCGCCACAT 60.742 61.111 31.54 14.90 42.48 3.21
2541 2928 2.281484 ACACGAAGGCGCCACATT 60.281 55.556 31.54 15.15 42.48 2.71
2542 2929 1.004320 ACACGAAGGCGCCACATTA 60.004 52.632 31.54 0.00 42.48 1.90
2543 2930 1.296056 ACACGAAGGCGCCACATTAC 61.296 55.000 31.54 11.50 42.48 1.89
2544 2931 1.004320 ACGAAGGCGCCACATTACA 60.004 52.632 31.54 0.00 42.48 2.41
2545 2932 1.296056 ACGAAGGCGCCACATTACAC 61.296 55.000 31.54 8.98 42.48 2.90
2546 2933 1.019278 CGAAGGCGCCACATTACACT 61.019 55.000 31.54 0.00 0.00 3.55
2547 2934 0.447801 GAAGGCGCCACATTACACTG 59.552 55.000 31.54 0.00 0.00 3.66
2548 2935 0.250727 AAGGCGCCACATTACACTGT 60.251 50.000 31.54 0.00 0.00 3.55
2549 2936 0.955428 AGGCGCCACATTACACTGTG 60.955 55.000 31.54 6.19 44.92 3.66
2550 2937 1.154225 GCGCCACATTACACTGTGC 60.154 57.895 7.90 0.00 44.16 4.57
2551 2938 1.851021 GCGCCACATTACACTGTGCA 61.851 55.000 7.90 0.00 44.16 4.57
2552 2939 0.590682 CGCCACATTACACTGTGCAA 59.409 50.000 7.90 1.06 44.16 4.08
2553 2940 1.662876 CGCCACATTACACTGTGCAAC 60.663 52.381 7.90 0.00 44.16 4.17
2554 2941 1.662876 GCCACATTACACTGTGCAACG 60.663 52.381 7.90 0.00 44.16 4.10
2555 2942 1.662876 CCACATTACACTGTGCAACGC 60.663 52.381 7.90 0.00 44.16 4.84
2556 2943 0.591170 ACATTACACTGTGCAACGCC 59.409 50.000 7.90 0.00 42.39 5.68
2557 2944 0.874390 CATTACACTGTGCAACGCCT 59.126 50.000 7.90 0.00 42.39 5.52
2558 2945 1.135972 CATTACACTGTGCAACGCCTC 60.136 52.381 7.90 0.00 42.39 4.70
2559 2946 0.179070 TTACACTGTGCAACGCCTCA 60.179 50.000 7.90 0.00 42.39 3.86
2560 2947 0.878523 TACACTGTGCAACGCCTCAC 60.879 55.000 7.90 0.00 42.39 3.51
2561 2948 2.179547 CACTGTGCAACGCCTCACA 61.180 57.895 0.00 4.54 42.39 3.58
2562 2949 1.451207 ACTGTGCAACGCCTCACAA 60.451 52.632 0.00 0.00 41.95 3.33
2563 2950 1.029408 ACTGTGCAACGCCTCACAAA 61.029 50.000 0.00 0.00 41.95 2.83
2564 2951 0.311790 CTGTGCAACGCCTCACAAAT 59.688 50.000 0.00 0.00 41.95 2.32
2565 2952 1.535028 CTGTGCAACGCCTCACAAATA 59.465 47.619 0.00 0.00 41.95 1.40
2566 2953 1.535028 TGTGCAACGCCTCACAAATAG 59.465 47.619 0.00 0.00 42.39 1.73
2567 2954 1.135689 GTGCAACGCCTCACAAATAGG 60.136 52.381 0.00 0.00 37.17 2.57
2574 2961 2.309528 CCTCACAAATAGGCGCTACA 57.690 50.000 7.64 0.00 0.00 2.74
2575 2962 1.933853 CCTCACAAATAGGCGCTACAC 59.066 52.381 7.64 0.00 0.00 2.90
2577 2964 0.650512 CACAAATAGGCGCTACACGG 59.349 55.000 7.64 0.00 43.93 4.94
2586 2973 2.582498 GCTACACGGCCAGCGTAG 60.582 66.667 15.58 15.58 38.25 3.51
2587 2974 2.882876 CTACACGGCCAGCGTAGT 59.117 61.111 2.24 0.00 32.37 2.73
2588 2975 1.516386 CTACACGGCCAGCGTAGTG 60.516 63.158 2.24 3.82 40.17 2.74
2589 2976 2.884087 CTACACGGCCAGCGTAGTGG 62.884 65.000 2.24 0.00 41.01 4.00
2590 2977 4.373116 CACGGCCAGCGTAGTGGT 62.373 66.667 2.24 0.00 40.09 4.16
2591 2978 4.373116 ACGGCCAGCGTAGTGGTG 62.373 66.667 2.24 0.00 45.74 4.17
2604 2991 2.093216 GTGGTGATAGCACTGCAGC 58.907 57.895 15.27 0.57 42.83 5.25
2605 2992 0.674581 GTGGTGATAGCACTGCAGCA 60.675 55.000 15.27 0.00 42.83 4.41
2606 2993 0.392060 TGGTGATAGCACTGCAGCAG 60.392 55.000 21.54 21.54 44.52 4.24
2607 2994 0.107993 GGTGATAGCACTGCAGCAGA 60.108 55.000 29.70 6.71 44.52 4.26
2608 2995 1.288350 GTGATAGCACTGCAGCAGAG 58.712 55.000 29.70 22.13 41.84 3.35
2609 2996 0.177373 TGATAGCACTGCAGCAGAGG 59.823 55.000 29.70 20.00 35.18 3.69
2610 2997 1.153208 ATAGCACTGCAGCAGAGGC 60.153 57.895 29.70 27.64 41.61 4.70
2620 3007 3.207354 GCAGAGGCGGTGCTACTA 58.793 61.111 6.84 0.00 37.96 1.82
2621 3008 1.515954 GCAGAGGCGGTGCTACTAA 59.484 57.895 6.84 0.00 37.96 2.24
2622 3009 0.108329 GCAGAGGCGGTGCTACTAAA 60.108 55.000 6.84 0.00 37.96 1.85
2623 3010 1.927895 CAGAGGCGGTGCTACTAAAG 58.072 55.000 0.00 0.00 0.00 1.85
2624 3011 0.824759 AGAGGCGGTGCTACTAAAGG 59.175 55.000 0.00 0.00 0.00 3.11
2625 3012 0.810426 GAGGCGGTGCTACTAAAGGC 60.810 60.000 0.00 0.00 0.00 4.35
2626 3013 1.818363 GGCGGTGCTACTAAAGGCC 60.818 63.158 0.00 0.00 0.00 5.19
2627 3014 1.818363 GCGGTGCTACTAAAGGCCC 60.818 63.158 0.00 0.00 0.00 5.80
2628 3015 1.905512 CGGTGCTACTAAAGGCCCT 59.094 57.895 0.00 0.00 0.00 5.19
2629 3016 0.252197 CGGTGCTACTAAAGGCCCTT 59.748 55.000 0.00 0.00 0.00 3.95
2630 3017 1.751437 GGTGCTACTAAAGGCCCTTG 58.249 55.000 0.00 0.00 0.00 3.61
2631 3018 1.682087 GGTGCTACTAAAGGCCCTTGG 60.682 57.143 0.00 0.00 0.00 3.61
2642 3029 2.202824 CCCTTGGCATTGCGCATG 60.203 61.111 12.75 13.15 45.17 4.06
2643 3030 2.712944 CCCTTGGCATTGCGCATGA 61.713 57.895 12.75 0.00 45.17 3.07
2644 3031 1.517694 CCTTGGCATTGCGCATGAC 60.518 57.895 12.75 14.83 45.17 3.06
2645 3032 1.870458 CTTGGCATTGCGCATGACG 60.870 57.895 12.75 0.53 45.35 4.35
2646 3033 2.255994 CTTGGCATTGCGCATGACGA 62.256 55.000 12.75 12.92 45.35 4.20
2647 3034 1.655885 TTGGCATTGCGCATGACGAT 61.656 50.000 12.75 0.00 45.35 3.73
2648 3035 2.050639 TGGCATTGCGCATGACGATC 62.051 55.000 12.75 0.00 45.35 3.69
2655 3042 4.528674 GCATGACGATCTGGCAGT 57.471 55.556 15.27 1.47 0.00 4.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
194 195 2.242043 CTCCCAGTGCAGAAAACCAAT 58.758 47.619 0.00 0.00 0.00 3.16
208 209 2.967362 TGTAAACATACACGCTCCCAG 58.033 47.619 0.00 0.00 0.00 4.45
394 400 8.381387 GTTTATCGGAGAATGAAGTTTCTACAC 58.619 37.037 0.00 0.00 43.58 2.90
475 481 1.107114 ACCTCTCACGGCAGATACAG 58.893 55.000 0.00 0.00 0.00 2.74
494 500 5.277825 CAGTCTCGTGTTTAAAAATGGCAA 58.722 37.500 0.00 0.00 0.00 4.52
548 557 1.688735 TCTATTCCAGAGGCACGATGG 59.311 52.381 0.00 0.00 39.63 3.51
616 625 0.389426 TAGGTCTTTTGGCGCGAGAC 60.389 55.000 12.10 13.70 39.19 3.36
637 646 1.623542 GGAGATACTTGTGCCCGGGT 61.624 60.000 24.63 2.66 0.00 5.28
787 813 2.000447 GTAGAAGTTGTAAGGCAGCGG 59.000 52.381 0.00 0.00 33.27 5.52
794 820 3.361053 CGTGAGCGTGTAGAAGTTGTAAG 59.639 47.826 0.00 0.00 0.00 2.34
795 821 3.302555 CGTGAGCGTGTAGAAGTTGTAA 58.697 45.455 0.00 0.00 0.00 2.41
796 822 2.351060 CCGTGAGCGTGTAGAAGTTGTA 60.351 50.000 0.00 0.00 36.15 2.41
859 888 3.527775 GAGCTAGCCCGGCCATGAG 62.528 68.421 12.13 0.00 0.00 2.90
892 922 6.397584 CGATGACGAGTGTGCGTTTTATATAG 60.398 42.308 0.00 0.00 45.72 1.31
893 923 5.397240 CGATGACGAGTGTGCGTTTTATATA 59.603 40.000 0.00 0.00 45.72 0.86
894 924 4.206404 CGATGACGAGTGTGCGTTTTATAT 59.794 41.667 0.00 0.00 45.72 0.86
895 925 3.544682 CGATGACGAGTGTGCGTTTTATA 59.455 43.478 0.00 0.00 45.72 0.98
896 926 2.344441 CGATGACGAGTGTGCGTTTTAT 59.656 45.455 0.00 0.00 45.72 1.40
897 927 1.717113 CGATGACGAGTGTGCGTTTTA 59.283 47.619 0.00 0.00 45.72 1.52
898 928 0.506932 CGATGACGAGTGTGCGTTTT 59.493 50.000 0.00 0.00 45.72 2.43
933 963 0.034059 GTGGACTCTGGTGACTGGTG 59.966 60.000 0.00 0.00 0.00 4.17
938 968 0.387929 TCGTTGTGGACTCTGGTGAC 59.612 55.000 0.00 0.00 0.00 3.67
939 969 1.068588 CTTCGTTGTGGACTCTGGTGA 59.931 52.381 0.00 0.00 0.00 4.02
940 970 1.502231 CTTCGTTGTGGACTCTGGTG 58.498 55.000 0.00 0.00 0.00 4.17
941 971 0.249911 GCTTCGTTGTGGACTCTGGT 60.250 55.000 0.00 0.00 0.00 4.00
942 972 0.249868 TGCTTCGTTGTGGACTCTGG 60.250 55.000 0.00 0.00 0.00 3.86
943 973 1.528586 CTTGCTTCGTTGTGGACTCTG 59.471 52.381 0.00 0.00 0.00 3.35
944 974 1.139058 ACTTGCTTCGTTGTGGACTCT 59.861 47.619 0.00 0.00 0.00 3.24
945 975 1.261619 CACTTGCTTCGTTGTGGACTC 59.738 52.381 0.00 0.00 0.00 3.36
959 990 2.275318 GAGTGGCTAGATCACACTTGC 58.725 52.381 15.75 0.00 44.79 4.01
1107 1138 1.153549 CAGGCTTACCTCGGTCTGC 60.154 63.158 0.00 0.00 46.34 4.26
1125 1156 4.638304 TGGCAGAGTCAGTTAGGTAAAAC 58.362 43.478 0.00 0.00 0.00 2.43
1130 1161 2.540383 TGATGGCAGAGTCAGTTAGGT 58.460 47.619 0.00 0.00 0.00 3.08
1244 1305 1.221021 GGTTGGGGAGGATGTCGAC 59.779 63.158 9.11 9.11 0.00 4.20
1395 1483 4.116328 CGCTGCCTCGACGGAGAA 62.116 66.667 7.10 0.00 43.27 2.87
1478 1566 4.681978 GCCACCGAGAACACCGCT 62.682 66.667 0.00 0.00 0.00 5.52
1763 1931 5.704515 AGACATCATCACCAAGAAAGACAAG 59.295 40.000 0.00 0.00 0.00 3.16
1951 2338 4.084433 TGACGACAAAAGTTATACCGTTGC 60.084 41.667 0.00 0.00 0.00 4.17
1971 2358 0.521735 GTCCGGCAATCCACTTTGAC 59.478 55.000 0.00 0.00 0.00 3.18
1975 2362 0.035439 AATCGTCCGGCAATCCACTT 60.035 50.000 0.00 0.00 0.00 3.16
1976 2363 0.462047 GAATCGTCCGGCAATCCACT 60.462 55.000 0.00 0.00 0.00 4.00
1977 2364 0.742990 TGAATCGTCCGGCAATCCAC 60.743 55.000 0.00 0.00 0.00 4.02
1978 2365 0.461870 CTGAATCGTCCGGCAATCCA 60.462 55.000 0.00 0.00 0.00 3.41
1979 2366 1.160329 CCTGAATCGTCCGGCAATCC 61.160 60.000 0.00 0.00 0.00 3.01
1980 2367 2.311294 CCTGAATCGTCCGGCAATC 58.689 57.895 0.00 0.00 0.00 2.67
1981 2368 4.540153 CCTGAATCGTCCGGCAAT 57.460 55.556 0.00 0.00 0.00 3.56
1985 2372 2.558554 AAGTCGCCTGAATCGTCCGG 62.559 60.000 0.00 0.00 0.00 5.14
1986 2373 1.140407 GAAGTCGCCTGAATCGTCCG 61.140 60.000 0.00 0.00 0.00 4.79
1987 2374 0.173708 AGAAGTCGCCTGAATCGTCC 59.826 55.000 0.00 0.00 0.00 4.79
1988 2375 1.551145 GAGAAGTCGCCTGAATCGTC 58.449 55.000 0.00 0.00 0.00 4.20
1989 2376 0.173708 GGAGAAGTCGCCTGAATCGT 59.826 55.000 0.00 0.00 32.72 3.73
1990 2377 0.867753 CGGAGAAGTCGCCTGAATCG 60.868 60.000 0.00 0.00 33.34 3.34
1991 2378 0.528684 CCGGAGAAGTCGCCTGAATC 60.529 60.000 0.00 0.00 33.34 2.52
1992 2379 1.258445 ACCGGAGAAGTCGCCTGAAT 61.258 55.000 9.46 0.00 33.34 2.57
1993 2380 1.906824 ACCGGAGAAGTCGCCTGAA 60.907 57.895 9.46 0.00 33.34 3.02
1994 2381 2.282958 ACCGGAGAAGTCGCCTGA 60.283 61.111 9.46 0.00 33.34 3.86
1995 2382 2.125912 CACCGGAGAAGTCGCCTG 60.126 66.667 9.46 0.00 33.34 4.85
1996 2383 3.382832 CCACCGGAGAAGTCGCCT 61.383 66.667 9.46 0.00 33.34 5.52
1997 2384 3.379445 TCCACCGGAGAAGTCGCC 61.379 66.667 9.46 0.00 0.00 5.54
2006 2393 3.083349 CCAGCATCCTCCACCGGA 61.083 66.667 9.46 0.00 37.50 5.14
2007 2394 4.864334 GCCAGCATCCTCCACCGG 62.864 72.222 0.00 0.00 0.00 5.28
2008 2395 4.100084 TGCCAGCATCCTCCACCG 62.100 66.667 0.00 0.00 0.00 4.94
2009 2396 2.124403 CTGCCAGCATCCTCCACC 60.124 66.667 0.00 0.00 0.00 4.61
2010 2397 2.124403 CCTGCCAGCATCCTCCAC 60.124 66.667 0.00 0.00 0.00 4.02
2011 2398 1.792757 AAACCTGCCAGCATCCTCCA 61.793 55.000 0.00 0.00 0.00 3.86
2012 2399 0.613012 AAAACCTGCCAGCATCCTCC 60.613 55.000 0.00 0.00 0.00 4.30
2013 2400 0.529378 CAAAACCTGCCAGCATCCTC 59.471 55.000 0.00 0.00 0.00 3.71
2014 2401 1.538687 GCAAAACCTGCCAGCATCCT 61.539 55.000 0.00 0.00 46.13 3.24
2015 2402 1.079612 GCAAAACCTGCCAGCATCC 60.080 57.895 0.00 0.00 46.13 3.51
2016 2403 4.584688 GCAAAACCTGCCAGCATC 57.415 55.556 0.00 0.00 46.13 3.91
2026 2413 1.471829 CCCTGGTCCAAGGCAAAACC 61.472 60.000 0.00 0.00 35.85 3.27
2027 2414 1.471829 CCCCTGGTCCAAGGCAAAAC 61.472 60.000 0.21 0.00 35.85 2.43
2028 2415 1.152355 CCCCTGGTCCAAGGCAAAA 60.152 57.895 0.21 0.00 35.85 2.44
2029 2416 2.525592 CCCCTGGTCCAAGGCAAA 59.474 61.111 0.21 0.00 35.85 3.68
2030 2417 4.299796 GCCCCTGGTCCAAGGCAA 62.300 66.667 22.41 0.00 45.07 4.52
2033 2420 3.920093 GAACGCCCCTGGTCCAAGG 62.920 68.421 0.00 0.00 37.05 3.61
2034 2421 2.359975 GAACGCCCCTGGTCCAAG 60.360 66.667 0.00 0.00 0.00 3.61
2035 2422 4.323477 CGAACGCCCCTGGTCCAA 62.323 66.667 0.00 0.00 0.00 3.53
2041 2428 4.452733 GAGTCCCGAACGCCCCTG 62.453 72.222 0.00 0.00 0.00 4.45
2077 2464 2.106683 ATTGTAAGCGCCGGACTGC 61.107 57.895 5.05 5.46 0.00 4.40
2078 2465 1.705337 CCATTGTAAGCGCCGGACTG 61.705 60.000 5.05 0.00 0.00 3.51
2079 2466 1.449601 CCATTGTAAGCGCCGGACT 60.450 57.895 5.05 0.00 0.00 3.85
2080 2467 1.429148 CTCCATTGTAAGCGCCGGAC 61.429 60.000 5.05 0.00 0.00 4.79
2081 2468 1.153449 CTCCATTGTAAGCGCCGGA 60.153 57.895 5.05 0.00 0.00 5.14
2082 2469 2.180204 CCTCCATTGTAAGCGCCGG 61.180 63.158 2.29 0.00 0.00 6.13
2083 2470 1.429148 GACCTCCATTGTAAGCGCCG 61.429 60.000 2.29 0.00 0.00 6.46
2084 2471 1.429148 CGACCTCCATTGTAAGCGCC 61.429 60.000 2.29 0.00 0.00 6.53
2085 2472 0.459585 TCGACCTCCATTGTAAGCGC 60.460 55.000 0.00 0.00 0.00 5.92
2086 2473 2.128035 GATCGACCTCCATTGTAAGCG 58.872 52.381 0.00 0.00 0.00 4.68
2087 2474 2.484889 GGATCGACCTCCATTGTAAGC 58.515 52.381 0.00 0.00 35.24 3.09
2099 2486 1.742768 CCTGCCTGTAGGATCGACC 59.257 63.158 1.17 0.00 40.42 4.79
2100 2487 1.068250 GCCTGCCTGTAGGATCGAC 59.932 63.158 5.38 0.00 40.42 4.20
2101 2488 0.185175 TAGCCTGCCTGTAGGATCGA 59.815 55.000 5.38 0.00 40.42 3.59
2102 2489 1.067283 CATAGCCTGCCTGTAGGATCG 60.067 57.143 5.38 0.00 40.42 3.69
2103 2490 1.277557 CCATAGCCTGCCTGTAGGATC 59.722 57.143 5.38 0.00 40.42 3.36
2104 2491 1.356124 CCATAGCCTGCCTGTAGGAT 58.644 55.000 5.38 0.96 40.42 3.24
2105 2492 0.031111 ACCATAGCCTGCCTGTAGGA 60.031 55.000 5.38 0.00 40.42 2.94
2106 2493 0.107456 CACCATAGCCTGCCTGTAGG 59.893 60.000 0.00 0.00 40.95 3.18
2107 2494 0.107456 CCACCATAGCCTGCCTGTAG 59.893 60.000 0.00 0.00 0.00 2.74
2108 2495 0.326143 TCCACCATAGCCTGCCTGTA 60.326 55.000 0.00 0.00 0.00 2.74
2109 2496 0.990282 ATCCACCATAGCCTGCCTGT 60.990 55.000 0.00 0.00 0.00 4.00
2110 2497 1.002888 CTATCCACCATAGCCTGCCTG 59.997 57.143 0.00 0.00 0.00 4.85
2111 2498 1.132721 TCTATCCACCATAGCCTGCCT 60.133 52.381 0.00 0.00 35.27 4.75
2112 2499 1.352083 TCTATCCACCATAGCCTGCC 58.648 55.000 0.00 0.00 35.27 4.85
2113 2500 3.604582 GATTCTATCCACCATAGCCTGC 58.395 50.000 0.00 0.00 35.27 4.85
2114 2501 3.368843 CCGATTCTATCCACCATAGCCTG 60.369 52.174 0.00 0.00 35.27 4.85
2115 2502 2.834549 CCGATTCTATCCACCATAGCCT 59.165 50.000 0.00 0.00 35.27 4.58
2116 2503 2.093447 CCCGATTCTATCCACCATAGCC 60.093 54.545 0.00 0.00 35.27 3.93
2117 2504 2.678190 GCCCGATTCTATCCACCATAGC 60.678 54.545 0.00 0.00 35.27 2.97
2118 2505 2.093447 GGCCCGATTCTATCCACCATAG 60.093 54.545 0.00 0.00 36.50 2.23
2119 2506 1.906574 GGCCCGATTCTATCCACCATA 59.093 52.381 0.00 0.00 0.00 2.74
2120 2507 0.693049 GGCCCGATTCTATCCACCAT 59.307 55.000 0.00 0.00 0.00 3.55
2121 2508 1.415672 GGGCCCGATTCTATCCACCA 61.416 60.000 5.69 0.00 0.00 4.17
2122 2509 1.128188 AGGGCCCGATTCTATCCACC 61.128 60.000 18.44 0.00 0.00 4.61
2123 2510 0.321996 GAGGGCCCGATTCTATCCAC 59.678 60.000 18.44 0.00 0.00 4.02
2124 2511 0.105194 TGAGGGCCCGATTCTATCCA 60.105 55.000 18.44 1.53 0.00 3.41
2125 2512 0.610687 CTGAGGGCCCGATTCTATCC 59.389 60.000 18.44 0.00 0.00 2.59
2126 2513 1.273886 GTCTGAGGGCCCGATTCTATC 59.726 57.143 18.44 7.12 0.00 2.08
2127 2514 1.133009 AGTCTGAGGGCCCGATTCTAT 60.133 52.381 18.44 0.00 0.00 1.98
2128 2515 0.261991 AGTCTGAGGGCCCGATTCTA 59.738 55.000 18.44 0.00 0.00 2.10
2129 2516 1.002274 AGTCTGAGGGCCCGATTCT 59.998 57.895 18.44 9.89 0.00 2.40
2130 2517 1.144936 CAGTCTGAGGGCCCGATTC 59.855 63.158 18.44 9.69 0.00 2.52
2131 2518 2.370445 CCAGTCTGAGGGCCCGATT 61.370 63.158 18.44 0.00 0.00 3.34
2132 2519 2.765807 CCAGTCTGAGGGCCCGAT 60.766 66.667 18.44 0.00 0.00 4.18
2137 2524 0.530870 GAATACGCCAGTCTGAGGGC 60.531 60.000 0.00 9.62 46.80 5.19
2138 2525 0.105039 GGAATACGCCAGTCTGAGGG 59.895 60.000 0.00 2.82 0.00 4.30
2139 2526 1.115467 AGGAATACGCCAGTCTGAGG 58.885 55.000 0.00 0.00 0.00 3.86
2140 2527 1.804372 GCAGGAATACGCCAGTCTGAG 60.804 57.143 0.00 0.00 0.00 3.35
2141 2528 0.175760 GCAGGAATACGCCAGTCTGA 59.824 55.000 0.00 0.00 0.00 3.27
2142 2529 1.148157 CGCAGGAATACGCCAGTCTG 61.148 60.000 0.00 0.00 0.00 3.51
2143 2530 1.141881 CGCAGGAATACGCCAGTCT 59.858 57.895 0.00 0.00 0.00 3.24
2144 2531 0.249489 ATCGCAGGAATACGCCAGTC 60.249 55.000 0.00 0.00 0.00 3.51
2145 2532 0.530650 CATCGCAGGAATACGCCAGT 60.531 55.000 0.00 0.00 0.00 4.00
2146 2533 1.224069 CCATCGCAGGAATACGCCAG 61.224 60.000 0.00 0.00 0.00 4.85
2147 2534 1.227527 CCATCGCAGGAATACGCCA 60.228 57.895 0.00 0.00 0.00 5.69
2148 2535 1.961277 CCCATCGCAGGAATACGCC 60.961 63.158 0.00 0.00 0.00 5.68
2149 2536 2.607892 GCCCATCGCAGGAATACGC 61.608 63.158 0.00 0.00 37.47 4.42
2150 2537 1.227527 TGCCCATCGCAGGAATACG 60.228 57.895 0.00 0.00 44.64 3.06
2151 2538 4.876701 TGCCCATCGCAGGAATAC 57.123 55.556 0.00 0.00 44.64 1.89
2159 2546 1.895707 CTCCTCCAATGCCCATCGC 60.896 63.158 0.00 0.00 38.31 4.58
2160 2547 0.250209 CTCTCCTCCAATGCCCATCG 60.250 60.000 0.00 0.00 0.00 3.84
2161 2548 1.135094 TCTCTCCTCCAATGCCCATC 58.865 55.000 0.00 0.00 0.00 3.51
2162 2549 1.424302 CATCTCTCCTCCAATGCCCAT 59.576 52.381 0.00 0.00 0.00 4.00
2163 2550 0.841961 CATCTCTCCTCCAATGCCCA 59.158 55.000 0.00 0.00 0.00 5.36
2164 2551 0.536915 GCATCTCTCCTCCAATGCCC 60.537 60.000 0.00 0.00 38.82 5.36
2165 2552 3.018479 GCATCTCTCCTCCAATGCC 57.982 57.895 0.00 0.00 38.82 4.40
2166 2553 0.182061 TGGCATCTCTCCTCCAATGC 59.818 55.000 0.00 0.00 42.92 3.56
2167 2554 1.814634 GCTGGCATCTCTCCTCCAATG 60.815 57.143 0.00 0.00 0.00 2.82
2168 2555 0.473326 GCTGGCATCTCTCCTCCAAT 59.527 55.000 0.00 0.00 0.00 3.16
2169 2556 1.630126 GGCTGGCATCTCTCCTCCAA 61.630 60.000 0.00 0.00 0.00 3.53
2170 2557 2.068821 GGCTGGCATCTCTCCTCCA 61.069 63.158 0.00 0.00 0.00 3.86
2171 2558 2.817056 GGGCTGGCATCTCTCCTCC 61.817 68.421 2.88 0.00 0.00 4.30
2172 2559 2.817056 GGGGCTGGCATCTCTCCTC 61.817 68.421 2.88 0.00 0.00 3.71
2173 2560 2.771762 GGGGCTGGCATCTCTCCT 60.772 66.667 2.88 0.00 0.00 3.69
2174 2561 4.247380 CGGGGCTGGCATCTCTCC 62.247 72.222 2.88 0.00 0.00 3.71
2175 2562 4.247380 CCGGGGCTGGCATCTCTC 62.247 72.222 2.88 0.00 0.00 3.20
2228 2615 4.854924 TGGCGGTGGCATCGATGG 62.855 66.667 26.58 10.57 42.47 3.51
2229 2616 3.274586 CTGGCGGTGGCATCGATG 61.275 66.667 26.58 21.27 42.47 3.84
2230 2617 3.469970 TCTGGCGGTGGCATCGAT 61.470 61.111 26.58 0.00 42.47 3.59
2231 2618 4.451150 GTCTGGCGGTGGCATCGA 62.451 66.667 26.58 2.20 42.47 3.59
2232 2619 4.758251 TGTCTGGCGGTGGCATCG 62.758 66.667 17.35 17.35 42.47 3.84
2233 2620 3.127533 GTGTCTGGCGGTGGCATC 61.128 66.667 0.00 0.00 42.47 3.91
2234 2621 3.952508 TGTGTCTGGCGGTGGCAT 61.953 61.111 0.00 0.00 42.47 4.40
2235 2622 4.927782 GTGTGTCTGGCGGTGGCA 62.928 66.667 0.00 0.00 42.47 4.92
2248 2635 4.514577 CTAGGAGGCGCCCGTGTG 62.515 72.222 26.15 7.45 37.37 3.82
2249 2636 4.753662 TCTAGGAGGCGCCCGTGT 62.754 66.667 26.15 3.43 37.37 4.49
2250 2637 2.701163 GATTCTAGGAGGCGCCCGTG 62.701 65.000 26.15 9.57 37.37 4.94
2251 2638 2.444140 ATTCTAGGAGGCGCCCGT 60.444 61.111 26.15 18.37 37.37 5.28
2252 2639 2.340443 GATTCTAGGAGGCGCCCG 59.660 66.667 26.15 6.90 37.37 6.13
2253 2640 1.069935 GTGATTCTAGGAGGCGCCC 59.930 63.158 26.15 15.07 37.37 6.13
2254 2641 0.249657 CAGTGATTCTAGGAGGCGCC 60.250 60.000 21.89 21.89 0.00 6.53
2255 2642 0.249657 CCAGTGATTCTAGGAGGCGC 60.250 60.000 0.00 0.00 0.00 6.53
2256 2643 1.339610 CTCCAGTGATTCTAGGAGGCG 59.660 57.143 0.00 0.00 43.07 5.52
2257 2644 1.069978 GCTCCAGTGATTCTAGGAGGC 59.930 57.143 16.15 8.69 46.08 4.70
2258 2645 2.364970 CTGCTCCAGTGATTCTAGGAGG 59.635 54.545 16.15 0.00 46.08 4.30
2260 2647 2.023984 TCCTGCTCCAGTGATTCTAGGA 60.024 50.000 0.00 0.00 0.00 2.94
2261 2648 2.364970 CTCCTGCTCCAGTGATTCTAGG 59.635 54.545 0.00 0.00 0.00 3.02
2262 2649 3.295093 TCTCCTGCTCCAGTGATTCTAG 58.705 50.000 0.00 0.00 0.00 2.43
2263 2650 3.388552 TCTCCTGCTCCAGTGATTCTA 57.611 47.619 0.00 0.00 0.00 2.10
2264 2651 2.244486 TCTCCTGCTCCAGTGATTCT 57.756 50.000 0.00 0.00 0.00 2.40
2265 2652 2.545532 CGATCTCCTGCTCCAGTGATTC 60.546 54.545 0.00 0.00 0.00 2.52
2266 2653 1.411977 CGATCTCCTGCTCCAGTGATT 59.588 52.381 0.00 0.00 0.00 2.57
2267 2654 1.039068 CGATCTCCTGCTCCAGTGAT 58.961 55.000 0.00 0.00 0.00 3.06
2268 2655 1.670949 GCGATCTCCTGCTCCAGTGA 61.671 60.000 0.00 0.00 0.00 3.41
2269 2656 1.227205 GCGATCTCCTGCTCCAGTG 60.227 63.158 0.00 0.00 0.00 3.66
2270 2657 1.674764 CTGCGATCTCCTGCTCCAGT 61.675 60.000 0.00 0.00 0.00 4.00
2271 2658 1.067749 CTGCGATCTCCTGCTCCAG 59.932 63.158 0.00 0.00 0.00 3.86
2272 2659 3.086391 GCTGCGATCTCCTGCTCCA 62.086 63.158 0.00 0.00 0.00 3.86
2273 2660 2.280052 GCTGCGATCTCCTGCTCC 60.280 66.667 0.00 0.00 0.00 4.70
2274 2661 1.882167 GTGCTGCGATCTCCTGCTC 60.882 63.158 11.41 6.22 0.00 4.26
2275 2662 2.186384 GTGCTGCGATCTCCTGCT 59.814 61.111 11.41 0.00 0.00 4.24
2276 2663 2.894387 GGTGCTGCGATCTCCTGC 60.894 66.667 0.00 0.00 0.00 4.85
2277 2664 1.812922 GTGGTGCTGCGATCTCCTG 60.813 63.158 0.00 0.00 0.00 3.86
2278 2665 1.986757 AGTGGTGCTGCGATCTCCT 60.987 57.895 0.00 0.00 0.00 3.69
2279 2666 1.812922 CAGTGGTGCTGCGATCTCC 60.813 63.158 0.00 0.00 38.52 3.71
2280 2667 1.812922 CCAGTGGTGCTGCGATCTC 60.813 63.158 0.00 0.00 43.71 2.75
2281 2668 1.830587 TTCCAGTGGTGCTGCGATCT 61.831 55.000 9.54 0.00 43.71 2.75
2282 2669 1.364626 CTTCCAGTGGTGCTGCGATC 61.365 60.000 9.54 0.00 43.71 3.69
2283 2670 1.376424 CTTCCAGTGGTGCTGCGAT 60.376 57.895 9.54 0.00 43.71 4.58
2284 2671 2.031012 CTTCCAGTGGTGCTGCGA 59.969 61.111 9.54 0.00 43.71 5.10
2285 2672 3.052082 CCTTCCAGTGGTGCTGCG 61.052 66.667 9.54 0.00 43.71 5.18
2286 2673 3.368571 GCCTTCCAGTGGTGCTGC 61.369 66.667 9.54 4.58 43.71 5.25
2287 2674 1.970114 CTGCCTTCCAGTGGTGCTG 60.970 63.158 9.54 10.67 44.63 4.41
2288 2675 2.433446 CTGCCTTCCAGTGGTGCT 59.567 61.111 9.54 0.00 36.79 4.40
2289 2676 2.674380 CCTGCCTTCCAGTGGTGC 60.674 66.667 9.54 11.22 40.06 5.01
2290 2677 2.674380 GCCTGCCTTCCAGTGGTG 60.674 66.667 9.54 3.51 40.06 4.17
2291 2678 4.335647 CGCCTGCCTTCCAGTGGT 62.336 66.667 9.54 0.00 40.06 4.16
2311 2698 3.589654 ATCCCGTGTGGCTCGTGTG 62.590 63.158 0.00 0.00 0.00 3.82
2312 2699 3.296709 GATCCCGTGTGGCTCGTGT 62.297 63.158 0.00 0.00 0.00 4.49
2313 2700 2.509336 GATCCCGTGTGGCTCGTG 60.509 66.667 0.00 0.00 0.00 4.35
2314 2701 2.680352 AGATCCCGTGTGGCTCGT 60.680 61.111 0.00 0.00 0.00 4.18
2315 2702 2.202797 CAGATCCCGTGTGGCTCG 60.203 66.667 0.00 0.00 0.00 5.03
2316 2703 2.187946 CCAGATCCCGTGTGGCTC 59.812 66.667 0.00 0.00 34.05 4.70
2319 2706 2.593468 ATTCGCCAGATCCCGTGTGG 62.593 60.000 0.00 0.00 44.00 4.17
2320 2707 1.153369 ATTCGCCAGATCCCGTGTG 60.153 57.895 0.00 0.00 0.00 3.82
2321 2708 1.153369 CATTCGCCAGATCCCGTGT 60.153 57.895 0.00 0.00 0.00 4.49
2322 2709 2.537560 GCATTCGCCAGATCCCGTG 61.538 63.158 0.00 0.00 0.00 4.94
2323 2710 2.203070 GCATTCGCCAGATCCCGT 60.203 61.111 0.00 0.00 0.00 5.28
2345 2732 1.550130 TTGACTGGCCTAACGGGAGG 61.550 60.000 3.32 0.58 39.88 4.30
2346 2733 0.391263 GTTGACTGGCCTAACGGGAG 60.391 60.000 3.32 0.00 37.23 4.30
2347 2734 1.122632 TGTTGACTGGCCTAACGGGA 61.123 55.000 3.32 0.00 37.23 5.14
2348 2735 0.250553 TTGTTGACTGGCCTAACGGG 60.251 55.000 3.32 0.00 38.36 5.28
2349 2736 0.872388 GTTGTTGACTGGCCTAACGG 59.128 55.000 3.32 0.00 0.00 4.44
2350 2737 0.872388 GGTTGTTGACTGGCCTAACG 59.128 55.000 3.32 0.00 0.00 3.18
2351 2738 1.880027 CTGGTTGTTGACTGGCCTAAC 59.120 52.381 3.32 5.08 0.00 2.34
2352 2739 1.202879 CCTGGTTGTTGACTGGCCTAA 60.203 52.381 3.32 0.00 0.00 2.69
2353 2740 0.400213 CCTGGTTGTTGACTGGCCTA 59.600 55.000 3.32 0.00 0.00 3.93
2354 2741 1.151450 CCTGGTTGTTGACTGGCCT 59.849 57.895 3.32 0.00 0.00 5.19
2355 2742 1.152756 ACCTGGTTGTTGACTGGCC 60.153 57.895 0.00 0.00 0.00 5.36
2356 2743 2.032981 CACCTGGTTGTTGACTGGC 58.967 57.895 0.00 0.00 0.00 4.85
2357 2744 0.751277 TGCACCTGGTTGTTGACTGG 60.751 55.000 0.00 0.00 0.00 4.00
2358 2745 0.664761 CTGCACCTGGTTGTTGACTG 59.335 55.000 0.00 0.00 0.00 3.51
2359 2746 0.466189 CCTGCACCTGGTTGTTGACT 60.466 55.000 0.00 0.00 0.00 3.41
2360 2747 0.751643 ACCTGCACCTGGTTGTTGAC 60.752 55.000 0.00 0.00 31.67 3.18
2361 2748 0.751277 CACCTGCACCTGGTTGTTGA 60.751 55.000 0.00 0.00 33.44 3.18
2362 2749 1.735360 CACCTGCACCTGGTTGTTG 59.265 57.895 0.00 0.00 33.44 3.33
2363 2750 1.455587 CCACCTGCACCTGGTTGTT 60.456 57.895 0.00 0.00 33.44 2.83
2364 2751 2.195683 CCACCTGCACCTGGTTGT 59.804 61.111 0.00 0.00 33.44 3.32
2365 2752 3.297620 GCCACCTGCACCTGGTTG 61.298 66.667 0.00 0.00 40.77 3.77
2366 2753 4.603535 GGCCACCTGCACCTGGTT 62.604 66.667 0.00 0.00 43.89 3.67
2369 2756 4.371417 ATGGGCCACCTGCACCTG 62.371 66.667 9.28 0.00 45.47 4.00
2370 2757 4.052518 GATGGGCCACCTGCACCT 62.053 66.667 9.28 0.00 45.47 4.00
2371 2758 4.052518 AGATGGGCCACCTGCACC 62.053 66.667 9.28 0.00 45.47 5.01
2372 2759 2.753043 CAGATGGGCCACCTGCAC 60.753 66.667 16.67 0.00 46.61 4.57
2373 2760 4.051167 CCAGATGGGCCACCTGCA 62.051 66.667 23.44 0.00 43.89 4.41
2374 2761 3.731728 TCCAGATGGGCCACCTGC 61.732 66.667 23.44 5.89 37.76 4.85
2375 2762 2.273449 GTCCAGATGGGCCACCTG 59.727 66.667 21.89 21.89 37.76 4.00
2381 2768 4.489771 CGGTGGGTCCAGATGGGC 62.490 72.222 0.00 0.00 39.63 5.36
2382 2769 3.797353 CCGGTGGGTCCAGATGGG 61.797 72.222 0.00 0.00 35.57 4.00
2383 2770 3.797353 CCCGGTGGGTCCAGATGG 61.797 72.222 0.00 0.00 38.25 3.51
2421 2808 3.918253 TTGTCCACCGCATCAGCCC 62.918 63.158 0.00 0.00 37.52 5.19
2422 2809 1.315257 ATTTGTCCACCGCATCAGCC 61.315 55.000 0.00 0.00 37.52 4.85
2423 2810 0.527565 AATTTGTCCACCGCATCAGC 59.472 50.000 0.00 0.00 37.42 4.26
2424 2811 2.228582 TCAAATTTGTCCACCGCATCAG 59.771 45.455 17.47 0.00 0.00 2.90
2425 2812 2.030363 GTCAAATTTGTCCACCGCATCA 60.030 45.455 17.47 0.00 0.00 3.07
2426 2813 2.595386 GTCAAATTTGTCCACCGCATC 58.405 47.619 17.47 0.00 0.00 3.91
2427 2814 1.272212 GGTCAAATTTGTCCACCGCAT 59.728 47.619 24.09 0.00 36.56 4.73
2428 2815 0.671251 GGTCAAATTTGTCCACCGCA 59.329 50.000 24.09 0.00 36.56 5.69
2429 2816 0.958822 AGGTCAAATTTGTCCACCGC 59.041 50.000 28.50 8.36 38.59 5.68
2430 2817 3.128589 CCATAGGTCAAATTTGTCCACCG 59.871 47.826 28.50 18.17 38.59 4.94
2431 2818 4.157840 GTCCATAGGTCAAATTTGTCCACC 59.842 45.833 28.50 22.48 38.59 4.61
2432 2819 4.157840 GGTCCATAGGTCAAATTTGTCCAC 59.842 45.833 28.50 19.49 38.59 4.02
2433 2820 4.202620 TGGTCCATAGGTCAAATTTGTCCA 60.203 41.667 28.50 18.07 38.59 4.02
2434 2821 4.340617 TGGTCCATAGGTCAAATTTGTCC 58.659 43.478 22.29 22.29 36.76 4.02
2435 2822 5.975693 TTGGTCCATAGGTCAAATTTGTC 57.024 39.130 17.47 12.07 0.00 3.18
2436 2823 6.496565 TCATTTGGTCCATAGGTCAAATTTGT 59.503 34.615 17.47 1.67 36.45 2.83
2437 2824 6.934056 TCATTTGGTCCATAGGTCAAATTTG 58.066 36.000 12.15 12.15 36.45 2.32
2438 2825 7.552050 TTCATTTGGTCCATAGGTCAAATTT 57.448 32.000 13.19 0.00 36.45 1.82
2439 2826 7.552050 TTTCATTTGGTCCATAGGTCAAATT 57.448 32.000 13.19 0.00 36.45 1.82
2440 2827 7.399765 TGATTTCATTTGGTCCATAGGTCAAAT 59.600 33.333 0.00 11.34 37.74 2.32
2441 2828 6.723515 TGATTTCATTTGGTCCATAGGTCAAA 59.276 34.615 0.00 8.71 34.14 2.69
2442 2829 6.152661 GTGATTTCATTTGGTCCATAGGTCAA 59.847 38.462 0.00 0.00 0.00 3.18
2443 2830 5.652014 GTGATTTCATTTGGTCCATAGGTCA 59.348 40.000 0.00 0.00 0.00 4.02
2444 2831 5.652014 TGTGATTTCATTTGGTCCATAGGTC 59.348 40.000 0.00 0.00 0.00 3.85
2445 2832 5.579047 TGTGATTTCATTTGGTCCATAGGT 58.421 37.500 0.00 0.00 0.00 3.08
2446 2833 6.528537 TTGTGATTTCATTTGGTCCATAGG 57.471 37.500 0.00 0.00 0.00 2.57
2447 2834 8.875803 CATTTTGTGATTTCATTTGGTCCATAG 58.124 33.333 0.00 0.00 0.00 2.23
2448 2835 8.591940 TCATTTTGTGATTTCATTTGGTCCATA 58.408 29.630 0.00 0.00 0.00 2.74
2449 2836 7.451732 TCATTTTGTGATTTCATTTGGTCCAT 58.548 30.769 0.00 0.00 0.00 3.41
2450 2837 6.824553 TCATTTTGTGATTTCATTTGGTCCA 58.175 32.000 0.00 0.00 0.00 4.02
2451 2838 7.442062 AGTTCATTTTGTGATTTCATTTGGTCC 59.558 33.333 0.00 0.00 36.54 4.46
2452 2839 8.277713 CAGTTCATTTTGTGATTTCATTTGGTC 58.722 33.333 0.00 0.00 36.54 4.02
2453 2840 7.769970 ACAGTTCATTTTGTGATTTCATTTGGT 59.230 29.630 0.00 0.00 36.54 3.67
2454 2841 8.145316 ACAGTTCATTTTGTGATTTCATTTGG 57.855 30.769 0.00 0.00 36.54 3.28
2455 2842 8.277713 GGACAGTTCATTTTGTGATTTCATTTG 58.722 33.333 0.00 0.00 36.54 2.32
2456 2843 7.169645 CGGACAGTTCATTTTGTGATTTCATTT 59.830 33.333 0.00 0.00 36.54 2.32
2457 2844 6.642131 CGGACAGTTCATTTTGTGATTTCATT 59.358 34.615 0.00 0.00 36.54 2.57
2458 2845 6.151691 CGGACAGTTCATTTTGTGATTTCAT 58.848 36.000 0.00 0.00 36.54 2.57
2459 2846 5.067153 ACGGACAGTTCATTTTGTGATTTCA 59.933 36.000 0.00 0.00 36.54 2.69
2460 2847 5.399301 CACGGACAGTTCATTTTGTGATTTC 59.601 40.000 0.00 0.00 36.54 2.17
2461 2848 5.067153 TCACGGACAGTTCATTTTGTGATTT 59.933 36.000 0.00 0.00 36.54 2.17
2462 2849 4.578516 TCACGGACAGTTCATTTTGTGATT 59.421 37.500 0.00 0.00 36.54 2.57
2463 2850 4.133820 TCACGGACAGTTCATTTTGTGAT 58.866 39.130 0.00 0.00 36.54 3.06
2464 2851 3.536570 TCACGGACAGTTCATTTTGTGA 58.463 40.909 0.00 0.00 33.14 3.58
2465 2852 3.961477 TCACGGACAGTTCATTTTGTG 57.039 42.857 0.00 0.00 0.00 3.33
2466 2853 4.398044 AGTTTCACGGACAGTTCATTTTGT 59.602 37.500 0.00 0.00 0.00 2.83
2467 2854 4.920376 AGTTTCACGGACAGTTCATTTTG 58.080 39.130 0.00 0.00 0.00 2.44
2468 2855 6.877611 ATAGTTTCACGGACAGTTCATTTT 57.122 33.333 0.00 0.00 0.00 1.82
2469 2856 6.877611 AATAGTTTCACGGACAGTTCATTT 57.122 33.333 0.00 0.00 0.00 2.32
2470 2857 6.485313 TGAAATAGTTTCACGGACAGTTCATT 59.515 34.615 1.24 0.00 44.21 2.57
2471 2858 5.995282 TGAAATAGTTTCACGGACAGTTCAT 59.005 36.000 1.24 0.00 44.21 2.57
2472 2859 5.361427 TGAAATAGTTTCACGGACAGTTCA 58.639 37.500 1.24 0.00 44.21 3.18
2473 2860 5.917541 TGAAATAGTTTCACGGACAGTTC 57.082 39.130 1.24 0.00 44.21 3.01
2483 2870 1.463056 CAGCCGCGTGAAATAGTTTCA 59.537 47.619 4.92 1.24 46.68 2.69
2484 2871 1.730064 TCAGCCGCGTGAAATAGTTTC 59.270 47.619 4.92 0.00 40.08 2.78
2485 2872 1.463444 GTCAGCCGCGTGAAATAGTTT 59.537 47.619 4.92 0.00 0.00 2.66
2486 2873 1.076332 GTCAGCCGCGTGAAATAGTT 58.924 50.000 4.92 0.00 0.00 2.24
2487 2874 0.246635 AGTCAGCCGCGTGAAATAGT 59.753 50.000 4.92 0.00 0.00 2.12
2488 2875 1.359848 AAGTCAGCCGCGTGAAATAG 58.640 50.000 4.92 0.00 0.00 1.73
2489 2876 1.803334 AAAGTCAGCCGCGTGAAATA 58.197 45.000 4.92 0.00 0.00 1.40
2490 2877 0.951558 AAAAGTCAGCCGCGTGAAAT 59.048 45.000 4.92 0.00 0.00 2.17
2491 2878 0.736053 AAAAAGTCAGCCGCGTGAAA 59.264 45.000 4.92 0.00 0.00 2.69
2492 2879 2.399856 AAAAAGTCAGCCGCGTGAA 58.600 47.368 4.92 0.00 0.00 3.18
2493 2880 4.134623 AAAAAGTCAGCCGCGTGA 57.865 50.000 4.92 0.00 0.00 4.35
2507 2894 1.025113 TGTCGGGCGTCACACAAAAA 61.025 50.000 0.00 0.00 0.00 1.94
2508 2895 1.449778 TGTCGGGCGTCACACAAAA 60.450 52.632 0.00 0.00 0.00 2.44
2509 2896 2.174969 GTGTCGGGCGTCACACAAA 61.175 57.895 5.81 0.00 42.20 2.83
2510 2897 2.586635 GTGTCGGGCGTCACACAA 60.587 61.111 5.81 0.00 42.20 3.33
2511 2898 4.934942 CGTGTCGGGCGTCACACA 62.935 66.667 10.72 0.00 42.67 3.72
2512 2899 4.634133 TCGTGTCGGGCGTCACAC 62.634 66.667 0.75 0.75 39.70 3.82
2513 2900 3.834447 CTTCGTGTCGGGCGTCACA 62.834 63.158 0.00 0.00 34.69 3.58
2514 2901 3.103911 CTTCGTGTCGGGCGTCAC 61.104 66.667 0.00 0.00 0.00 3.67
2515 2902 4.351938 CCTTCGTGTCGGGCGTCA 62.352 66.667 0.00 0.00 0.00 4.35
2523 2910 1.017177 TAATGTGGCGCCTTCGTGTC 61.017 55.000 29.70 9.44 38.14 3.67
2524 2911 1.004320 TAATGTGGCGCCTTCGTGT 60.004 52.632 29.70 10.47 38.14 4.49
2525 2912 1.295357 TGTAATGTGGCGCCTTCGTG 61.295 55.000 29.70 0.00 38.14 4.35
2526 2913 1.004320 TGTAATGTGGCGCCTTCGT 60.004 52.632 29.70 18.65 38.14 3.85
2527 2914 1.019278 AGTGTAATGTGGCGCCTTCG 61.019 55.000 29.70 0.00 39.07 3.79
2528 2915 0.447801 CAGTGTAATGTGGCGCCTTC 59.552 55.000 29.70 20.58 0.00 3.46
2529 2916 0.250727 ACAGTGTAATGTGGCGCCTT 60.251 50.000 29.70 16.60 30.46 4.35
2530 2917 0.955428 CACAGTGTAATGTGGCGCCT 60.955 55.000 29.70 9.99 45.53 5.52
2531 2918 1.501741 CACAGTGTAATGTGGCGCC 59.498 57.895 22.73 22.73 45.53 6.53
2537 2924 0.591170 GGCGTTGCACAGTGTAATGT 59.409 50.000 20.76 0.00 32.60 2.71
2538 2925 0.874390 AGGCGTTGCACAGTGTAATG 59.126 50.000 16.94 16.94 33.06 1.90
2539 2926 1.156736 GAGGCGTTGCACAGTGTAAT 58.843 50.000 7.39 0.00 0.00 1.89
2540 2927 0.179070 TGAGGCGTTGCACAGTGTAA 60.179 50.000 0.00 0.00 0.00 2.41
2541 2928 0.878523 GTGAGGCGTTGCACAGTGTA 60.879 55.000 1.61 0.00 35.19 2.90
2542 2929 2.180204 GTGAGGCGTTGCACAGTGT 61.180 57.895 1.61 0.00 35.19 3.55
2543 2930 1.713937 TTGTGAGGCGTTGCACAGTG 61.714 55.000 0.00 0.00 44.80 3.66
2544 2931 1.029408 TTTGTGAGGCGTTGCACAGT 61.029 50.000 0.00 0.00 44.80 3.55
2545 2932 0.311790 ATTTGTGAGGCGTTGCACAG 59.688 50.000 0.00 0.00 44.80 3.66
2546 2933 1.535028 CTATTTGTGAGGCGTTGCACA 59.465 47.619 0.00 0.00 42.73 4.57
2547 2934 1.135689 CCTATTTGTGAGGCGTTGCAC 60.136 52.381 0.00 0.00 35.63 4.57
2548 2935 1.164411 CCTATTTGTGAGGCGTTGCA 58.836 50.000 0.00 0.00 0.00 4.08
2549 2936 3.996825 CCTATTTGTGAGGCGTTGC 57.003 52.632 0.00 0.00 0.00 4.17
2555 2942 1.933853 GTGTAGCGCCTATTTGTGAGG 59.066 52.381 2.29 0.00 37.12 3.86
2556 2943 1.588404 CGTGTAGCGCCTATTTGTGAG 59.412 52.381 2.29 0.00 0.00 3.51
2557 2944 1.635844 CGTGTAGCGCCTATTTGTGA 58.364 50.000 2.29 0.00 0.00 3.58
2558 2945 0.650512 CCGTGTAGCGCCTATTTGTG 59.349 55.000 2.29 0.00 39.71 3.33
2559 2946 1.087771 GCCGTGTAGCGCCTATTTGT 61.088 55.000 2.29 0.00 39.71 2.83
2560 2947 1.641677 GCCGTGTAGCGCCTATTTG 59.358 57.895 2.29 0.00 39.71 2.32
2561 2948 1.523032 GGCCGTGTAGCGCCTATTT 60.523 57.895 2.29 0.00 39.71 1.40
2562 2949 2.108362 GGCCGTGTAGCGCCTATT 59.892 61.111 2.29 0.00 39.71 1.73
2563 2950 3.151710 TGGCCGTGTAGCGCCTAT 61.152 61.111 2.29 0.00 39.71 2.57
2564 2951 3.833645 CTGGCCGTGTAGCGCCTA 61.834 66.667 2.29 0.00 39.71 3.93
2575 2962 2.011741 TATCACCACTACGCTGGCCG 62.012 60.000 0.00 0.00 44.21 6.13
2576 2963 0.249489 CTATCACCACTACGCTGGCC 60.249 60.000 0.00 0.00 34.20 5.36
2577 2964 0.876342 GCTATCACCACTACGCTGGC 60.876 60.000 0.00 0.00 34.20 4.85
2578 2965 0.459899 TGCTATCACCACTACGCTGG 59.540 55.000 0.00 0.00 37.33 4.85
2579 2966 1.135139 AGTGCTATCACCACTACGCTG 59.865 52.381 0.00 0.00 44.16 5.18
2580 2967 1.135139 CAGTGCTATCACCACTACGCT 59.865 52.381 0.00 0.00 44.16 5.07
2581 2968 1.560923 CAGTGCTATCACCACTACGC 58.439 55.000 0.00 0.00 44.16 4.42
2582 2969 1.135112 TGCAGTGCTATCACCACTACG 60.135 52.381 17.60 0.00 44.16 3.51
2583 2970 2.544685 CTGCAGTGCTATCACCACTAC 58.455 52.381 17.60 0.00 44.16 2.73
2584 2971 1.134699 GCTGCAGTGCTATCACCACTA 60.135 52.381 17.60 0.00 44.16 2.74
2585 2972 0.392193 GCTGCAGTGCTATCACCACT 60.392 55.000 17.60 0.00 44.16 4.00
2586 2973 0.674581 TGCTGCAGTGCTATCACCAC 60.675 55.000 17.60 0.00 44.16 4.16
2587 2974 0.392060 CTGCTGCAGTGCTATCACCA 60.392 55.000 21.21 0.00 44.16 4.17
2588 2975 0.107993 TCTGCTGCAGTGCTATCACC 60.108 55.000 27.24 0.00 44.16 4.02
2589 2976 1.288350 CTCTGCTGCAGTGCTATCAC 58.712 55.000 27.24 1.72 43.44 3.06
2590 2977 0.177373 CCTCTGCTGCAGTGCTATCA 59.823 55.000 27.24 10.13 32.61 2.15
2591 2978 1.159098 GCCTCTGCTGCAGTGCTATC 61.159 60.000 27.24 11.30 32.61 2.08
2592 2979 1.153208 GCCTCTGCTGCAGTGCTAT 60.153 57.895 27.24 0.00 32.61 2.97
2593 2980 2.267006 GCCTCTGCTGCAGTGCTA 59.733 61.111 27.24 8.95 32.61 3.49
2596 2983 4.694233 ACCGCCTCTGCTGCAGTG 62.694 66.667 27.24 24.18 34.43 3.66
2597 2984 4.694233 CACCGCCTCTGCTGCAGT 62.694 66.667 27.24 6.84 34.43 4.40
2600 2987 4.457496 TAGCACCGCCTCTGCTGC 62.457 66.667 7.51 0.00 44.85 5.25
2601 2988 1.667154 TAGTAGCACCGCCTCTGCTG 61.667 60.000 7.51 0.00 44.85 4.41
2602 2989 0.970937 TTAGTAGCACCGCCTCTGCT 60.971 55.000 3.20 3.20 46.82 4.24
2603 2990 0.108329 TTTAGTAGCACCGCCTCTGC 60.108 55.000 0.00 0.00 34.63 4.26
2604 2991 1.471676 CCTTTAGTAGCACCGCCTCTG 60.472 57.143 0.00 0.00 0.00 3.35
2605 2992 0.824759 CCTTTAGTAGCACCGCCTCT 59.175 55.000 0.00 0.00 0.00 3.69
2606 2993 0.810426 GCCTTTAGTAGCACCGCCTC 60.810 60.000 0.00 0.00 0.00 4.70
2607 2994 1.221021 GCCTTTAGTAGCACCGCCT 59.779 57.895 0.00 0.00 0.00 5.52
2608 2995 1.818363 GGCCTTTAGTAGCACCGCC 60.818 63.158 0.00 0.00 0.00 6.13
2609 2996 1.818363 GGGCCTTTAGTAGCACCGC 60.818 63.158 0.84 0.00 0.00 5.68
2610 2997 0.252197 AAGGGCCTTTAGTAGCACCG 59.748 55.000 14.48 0.00 30.65 4.94
2611 2998 1.682087 CCAAGGGCCTTTAGTAGCACC 60.682 57.143 18.16 0.00 30.65 5.01
2612 2999 1.751437 CCAAGGGCCTTTAGTAGCAC 58.249 55.000 18.16 0.00 0.00 4.40
2613 3000 0.034477 GCCAAGGGCCTTTAGTAGCA 60.034 55.000 18.16 0.00 44.06 3.49
2614 3001 2.795165 GCCAAGGGCCTTTAGTAGC 58.205 57.895 18.16 10.90 44.06 3.58
2625 3012 2.202824 CATGCGCAATGCCAAGGG 60.203 61.111 17.11 0.00 45.60 3.95
2626 3013 1.517694 GTCATGCGCAATGCCAAGG 60.518 57.895 17.11 0.00 45.60 3.61
2627 3014 1.870458 CGTCATGCGCAATGCCAAG 60.870 57.895 17.11 0.00 45.60 3.61
2628 3015 1.655885 ATCGTCATGCGCAATGCCAA 61.656 50.000 17.11 0.00 45.60 4.52
2629 3016 2.050639 GATCGTCATGCGCAATGCCA 62.051 55.000 17.11 0.00 45.60 4.92
2630 3017 1.369689 GATCGTCATGCGCAATGCC 60.370 57.895 17.11 2.17 45.60 4.40
2631 3018 0.656495 CAGATCGTCATGCGCAATGC 60.656 55.000 17.11 6.26 46.70 3.56
2632 3019 0.041576 CCAGATCGTCATGCGCAATG 60.042 55.000 17.11 13.82 41.07 2.82
2633 3020 1.779025 GCCAGATCGTCATGCGCAAT 61.779 55.000 17.11 1.54 41.07 3.56
2634 3021 2.463620 GCCAGATCGTCATGCGCAA 61.464 57.895 17.11 0.00 41.07 4.85
2635 3022 2.891936 GCCAGATCGTCATGCGCA 60.892 61.111 14.96 14.96 41.07 6.09
2636 3023 2.879070 CTGCCAGATCGTCATGCGC 61.879 63.158 0.00 0.00 41.07 6.09
2637 3024 1.520120 ACTGCCAGATCGTCATGCG 60.520 57.895 0.00 3.55 43.01 4.73
2638 3025 4.528674 ACTGCCAGATCGTCATGC 57.471 55.556 0.00 0.00 0.00 4.06


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.