Multiple sequence alignment - TraesCS4D01G224900

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G224900 chr4D 100.000 4056 0 0 1 4056 381890449 381886394 0.000000e+00 7491.0
1 TraesCS4D01G224900 chr4A 90.770 3456 152 72 84 3406 81798618 81802039 0.000000e+00 4460.0
2 TraesCS4D01G224900 chr4A 87.943 141 15 1 3514 3654 81814538 81814676 9.020000e-37 165.0
3 TraesCS4D01G224900 chr4A 93.103 87 6 0 3413 3499 81814467 81814553 1.180000e-25 128.0
4 TraesCS4D01G224900 chr4B 92.817 2520 94 40 952 3406 469035830 469033333 0.000000e+00 3570.0
5 TraesCS4D01G224900 chr4B 87.438 812 40 25 156 949 469036639 469035872 0.000000e+00 878.0
6 TraesCS4D01G224900 chr4B 86.275 102 4 5 29 128 469036726 469036633 7.170000e-18 102.0
7 TraesCS4D01G224900 chr3D 100.000 88 0 0 3969 4056 609002183 609002096 3.240000e-36 163.0
8 TraesCS4D01G224900 chr3D 100.000 86 0 0 3971 4056 528794931 528795016 4.200000e-35 159.0
9 TraesCS4D01G224900 chr6A 98.864 88 1 0 3969 4056 519218908 519218821 1.510000e-34 158.0
10 TraesCS4D01G224900 chr3B 100.000 85 0 0 3972 4056 525648260 525648176 1.510000e-34 158.0
11 TraesCS4D01G224900 chr1A 98.864 88 1 0 3969 4056 355729447 355729360 1.510000e-34 158.0
12 TraesCS4D01G224900 chr2D 97.753 89 1 1 3969 4056 532049053 532048965 7.020000e-33 152.0
13 TraesCS4D01G224900 chr1D 97.647 85 2 0 3972 4056 487311157 487311241 3.270000e-31 147.0
14 TraesCS4D01G224900 chr1D 97.647 85 1 1 3972 4056 6519988 6519905 1.170000e-30 145.0
15 TraesCS4D01G224900 chr3A 97.590 83 2 0 3971 4053 157623291 157623373 4.230000e-30 143.0
16 TraesCS4D01G224900 chr7D 79.851 134 27 0 1808 1941 241882327 241882460 9.280000e-17 99.0
17 TraesCS4D01G224900 chr7A 77.852 149 33 0 1808 1956 256214334 256214186 4.320000e-15 93.5
18 TraesCS4D01G224900 chr7B 78.358 134 29 0 1808 1941 217625186 217625319 2.010000e-13 87.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G224900 chr4D 381886394 381890449 4055 True 7491.000000 7491 100.000000 1 4056 1 chr4D.!!$R1 4055
1 TraesCS4D01G224900 chr4A 81798618 81802039 3421 False 4460.000000 4460 90.770000 84 3406 1 chr4A.!!$F1 3322
2 TraesCS4D01G224900 chr4B 469033333 469036726 3393 True 1516.666667 3570 88.843333 29 3406 3 chr4B.!!$R1 3377

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
222 231 0.185901 ATGGAATGGAATGGGGACGG 59.814 55.0 0.00 0.0 0.00 4.79 F
1087 1225 0.517316 ACGCGGTTCTTGATTCTTGC 59.483 50.0 12.47 0.0 0.00 4.01 F
1088 1226 0.519175 CGCGGTTCTTGATTCTTGCG 60.519 55.0 0.00 0.0 38.28 4.85 F
1130 1276 0.524604 GCGGTTTGTTGAGCGTTTGT 60.525 50.0 0.00 0.0 42.11 2.83 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2085 2245 0.529378 GAAACGTCTAGGAAGCCCGA 59.471 55.000 0.00 0.00 37.58 5.14 R
3031 3239 1.001181 GAGCAGGAGCAGGATCTGATC 59.999 57.143 9.18 9.18 44.92 2.92 R
3042 3250 1.220477 GTCCTTCAGGAGCAGGAGC 59.780 63.158 0.00 0.00 46.49 4.70 R
3088 3296 2.747446 GTCCCGTATTCACACAAGCATT 59.253 45.455 0.00 0.00 0.00 3.56 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
75 78 0.320160 GAAAGCTGCCTTTTGCCCTG 60.320 55.000 0.00 0.00 41.22 4.45
101 104 0.933973 TTGCGTTGCGTTGATGCTTG 60.934 50.000 0.00 0.00 35.36 4.01
105 108 1.606606 GTTGCGTTGATGCTTGTAGC 58.393 50.000 0.00 0.00 42.82 3.58
206 209 3.495670 GCTACTCTACATAGCGGATGG 57.504 52.381 6.60 0.00 40.18 3.51
207 210 3.082548 GCTACTCTACATAGCGGATGGA 58.917 50.000 6.60 0.00 40.18 3.41
222 231 0.185901 ATGGAATGGAATGGGGACGG 59.814 55.000 0.00 0.00 0.00 4.79
282 292 5.716094 TGTTTTCGGTCTATTCTTCGATGA 58.284 37.500 0.00 0.00 0.00 2.92
342 352 4.640789 ACTCATAATCCTCTGTCACGAC 57.359 45.455 0.00 0.00 0.00 4.34
356 366 7.169645 CCTCTGTCACGACTAGACTAATACTAC 59.830 44.444 0.00 0.00 36.94 2.73
392 418 4.150897 AGAGTAGAGTAGTCTGGAGCAG 57.849 50.000 10.51 0.00 37.10 4.24
393 419 2.616842 GAGTAGAGTAGTCTGGAGCAGC 59.383 54.545 10.51 0.00 33.84 5.25
394 420 2.025793 AGTAGAGTAGTCTGGAGCAGCA 60.026 50.000 10.51 0.00 33.84 4.41
613 662 0.888619 CAGTCGCTAGTCCAAGTCCA 59.111 55.000 0.00 0.00 0.00 4.02
622 671 1.460689 TCCAAGTCCAACCCCGAGT 60.461 57.895 0.00 0.00 0.00 4.18
733 783 1.330829 GGAATCGCGAGGATTTGGTTC 59.669 52.381 16.66 10.58 45.33 3.62
746 796 1.558233 TTGGTTCGGTTTGGTTTGGT 58.442 45.000 0.00 0.00 0.00 3.67
747 797 1.558233 TGGTTCGGTTTGGTTTGGTT 58.442 45.000 0.00 0.00 0.00 3.67
748 798 1.900486 TGGTTCGGTTTGGTTTGGTTT 59.100 42.857 0.00 0.00 0.00 3.27
749 799 2.272678 GGTTCGGTTTGGTTTGGTTTG 58.727 47.619 0.00 0.00 0.00 2.93
750 800 2.272678 GTTCGGTTTGGTTTGGTTTGG 58.727 47.619 0.00 0.00 0.00 3.28
751 801 0.824759 TCGGTTTGGTTTGGTTTGGG 59.175 50.000 0.00 0.00 0.00 4.12
949 1011 1.895798 GAAGGCTGGGGGAAAAGAAAG 59.104 52.381 0.00 0.00 0.00 2.62
950 1012 0.542938 AGGCTGGGGGAAAAGAAAGC 60.543 55.000 0.00 0.00 0.00 3.51
1017 1121 4.195334 ATGGAGCGGTGCCATCCC 62.195 66.667 2.94 0.00 42.31 3.85
1087 1225 0.517316 ACGCGGTTCTTGATTCTTGC 59.483 50.000 12.47 0.00 0.00 4.01
1088 1226 0.519175 CGCGGTTCTTGATTCTTGCG 60.519 55.000 0.00 0.00 38.28 4.85
1089 1227 0.794605 GCGGTTCTTGATTCTTGCGC 60.795 55.000 0.00 0.00 0.00 6.09
1090 1228 0.798776 CGGTTCTTGATTCTTGCGCT 59.201 50.000 9.73 0.00 0.00 5.92
1119 1265 3.204505 TCGATTTCGAGCGGTTTGT 57.795 47.368 0.00 0.00 44.22 2.83
1130 1276 0.524604 GCGGTTTGTTGAGCGTTTGT 60.525 50.000 0.00 0.00 42.11 2.83
1169 1316 3.343421 GACAACGGGGTGTGCGAC 61.343 66.667 0.00 0.00 0.00 5.19
1649 1796 2.279451 CGGATCAGGCGCATCGAA 60.279 61.111 10.83 0.00 0.00 3.71
2005 2158 4.406943 GCAGTTTCTTGTTCAATCGATCC 58.593 43.478 0.00 0.00 0.00 3.36
2012 2165 3.912496 TGTTCAATCGATCCACAGGAT 57.088 42.857 0.00 0.00 46.28 3.24
2017 2174 5.818136 TCAATCGATCCACAGGATTTTTC 57.182 39.130 0.00 0.00 43.27 2.29
2018 2175 4.640201 TCAATCGATCCACAGGATTTTTCC 59.360 41.667 0.00 0.00 43.27 3.13
2030 2187 5.707764 ACAGGATTTTTCCTTCTAGAACAGC 59.292 40.000 0.00 0.00 38.22 4.40
2049 2206 1.202348 GCTTGTGTGCCCTGTATTTCC 59.798 52.381 0.00 0.00 0.00 3.13
2075 2232 6.365520 GGAGCTTTAAATTCCCCTCTTGATA 58.634 40.000 7.38 0.00 0.00 2.15
2085 2245 2.507471 CCCCTCTTGATAGTTCTTGGCT 59.493 50.000 0.00 0.00 0.00 4.75
2119 2279 1.135689 CGTTTCTTTGCCCTTCCATCG 60.136 52.381 0.00 0.00 0.00 3.84
2120 2280 2.159382 GTTTCTTTGCCCTTCCATCGA 58.841 47.619 0.00 0.00 0.00 3.59
2134 2294 1.417517 CCATCGATCTGTCCCCATTGA 59.582 52.381 0.00 0.00 0.00 2.57
2189 2354 2.054799 TGGTTGGCTCCAAACTAGTCT 58.945 47.619 16.71 0.00 43.51 3.24
2267 2435 4.074970 AGTTTCACCTCAATCACATCACC 58.925 43.478 0.00 0.00 0.00 4.02
2334 2506 4.884668 ACTTAAGACCCTGTCGAAATGA 57.115 40.909 10.09 0.00 37.67 2.57
2366 2548 8.321353 TCCTGCAAGAAAGAATTCAGATTACTA 58.679 33.333 8.44 0.00 38.06 1.82
2603 2797 3.334891 CACCCGATCCCCCACCAA 61.335 66.667 0.00 0.00 0.00 3.67
2671 2871 1.598924 CGAATACCTCGCCGACTAACC 60.599 57.143 0.00 0.00 41.49 2.85
3028 3236 5.428184 AGAAGAATCTCTACAACCTTGGG 57.572 43.478 0.00 0.00 0.00 4.12
3031 3239 3.054802 AGAATCTCTACAACCTTGGGCTG 60.055 47.826 0.00 0.00 0.00 4.85
3042 3250 1.202782 CCTTGGGCTGATCAGATCCTG 60.203 57.143 27.04 19.25 0.00 3.86
3043 3251 0.182061 TTGGGCTGATCAGATCCTGC 59.818 55.000 27.04 10.36 0.00 4.85
3044 3252 0.693430 TGGGCTGATCAGATCCTGCT 60.693 55.000 27.04 0.00 0.00 4.24
3045 3253 0.035176 GGGCTGATCAGATCCTGCTC 59.965 60.000 27.04 6.70 0.00 4.26
3046 3254 0.035176 GGCTGATCAGATCCTGCTCC 59.965 60.000 27.04 11.17 0.00 4.70
3047 3255 1.050204 GCTGATCAGATCCTGCTCCT 58.950 55.000 27.04 0.00 0.00 3.69
3229 3458 4.147653 GTCATGTATGTACGTATGTTCCGC 59.852 45.833 0.00 0.00 0.00 5.54
3277 3506 7.212274 ACCGATGTAAATAGGGTTGTACATAC 58.788 38.462 0.00 0.00 37.32 2.39
3346 3579 5.163703 TGTTTTAGACGTGCACAAATCAAGT 60.164 36.000 18.64 4.14 0.00 3.16
3361 3594 4.900635 ATCAAGTAAATTAAGCTGCCGG 57.099 40.909 0.00 0.00 0.00 6.13
3365 3598 6.584488 TCAAGTAAATTAAGCTGCCGGTATA 58.416 36.000 1.90 0.00 0.00 1.47
3414 3648 6.590234 ACCTGAAAAATCATACTTTGTCCC 57.410 37.500 0.00 0.00 0.00 4.46
3415 3649 6.074648 ACCTGAAAAATCATACTTTGTCCCA 58.925 36.000 0.00 0.00 0.00 4.37
3416 3650 6.209391 ACCTGAAAAATCATACTTTGTCCCAG 59.791 38.462 0.00 0.00 0.00 4.45
3417 3651 6.434028 CCTGAAAAATCATACTTTGTCCCAGA 59.566 38.462 0.00 0.00 0.00 3.86
3418 3652 7.362401 CCTGAAAAATCATACTTTGTCCCAGAG 60.362 40.741 0.00 0.00 0.00 3.35
3419 3653 7.230747 TGAAAAATCATACTTTGTCCCAGAGA 58.769 34.615 0.00 0.00 0.00 3.10
3420 3654 7.391554 TGAAAAATCATACTTTGTCCCAGAGAG 59.608 37.037 0.00 0.00 0.00 3.20
3421 3655 5.365021 AATCATACTTTGTCCCAGAGAGG 57.635 43.478 0.00 0.00 37.03 3.69
3422 3656 3.791320 TCATACTTTGTCCCAGAGAGGT 58.209 45.455 0.00 0.00 34.66 3.85
3423 3657 4.942944 TCATACTTTGTCCCAGAGAGGTA 58.057 43.478 0.00 0.00 34.66 3.08
3424 3658 4.710375 TCATACTTTGTCCCAGAGAGGTAC 59.290 45.833 0.00 0.00 34.66 3.34
3425 3659 2.258109 ACTTTGTCCCAGAGAGGTACC 58.742 52.381 2.73 2.73 34.66 3.34
3426 3660 1.555533 CTTTGTCCCAGAGAGGTACCC 59.444 57.143 8.74 0.00 34.66 3.69
3427 3661 0.613853 TTGTCCCAGAGAGGTACCCG 60.614 60.000 8.74 0.00 34.66 5.28
3428 3662 2.043248 TCCCAGAGAGGTACCCGC 60.043 66.667 8.74 0.54 34.66 6.13
3429 3663 3.528370 CCCAGAGAGGTACCCGCG 61.528 72.222 8.74 0.00 34.66 6.46
3430 3664 4.208686 CCAGAGAGGTACCCGCGC 62.209 72.222 8.74 0.00 0.00 6.86
3431 3665 3.449227 CAGAGAGGTACCCGCGCA 61.449 66.667 8.74 0.00 0.00 6.09
3432 3666 2.442272 AGAGAGGTACCCGCGCAT 60.442 61.111 8.74 0.00 0.00 4.73
3433 3667 1.152819 AGAGAGGTACCCGCGCATA 60.153 57.895 8.74 0.00 0.00 3.14
3434 3668 0.539901 AGAGAGGTACCCGCGCATAT 60.540 55.000 8.74 0.00 0.00 1.78
3435 3669 1.171308 GAGAGGTACCCGCGCATATA 58.829 55.000 8.74 0.00 0.00 0.86
3436 3670 1.542915 GAGAGGTACCCGCGCATATAA 59.457 52.381 8.74 0.00 0.00 0.98
3437 3671 1.965643 AGAGGTACCCGCGCATATAAA 59.034 47.619 8.74 0.00 0.00 1.40
3438 3672 2.064014 GAGGTACCCGCGCATATAAAC 58.936 52.381 8.74 0.00 0.00 2.01
3439 3673 1.690352 AGGTACCCGCGCATATAAACT 59.310 47.619 8.74 0.00 0.00 2.66
3440 3674 2.103601 AGGTACCCGCGCATATAAACTT 59.896 45.455 8.74 0.00 0.00 2.66
3441 3675 2.874086 GGTACCCGCGCATATAAACTTT 59.126 45.455 8.75 0.00 0.00 2.66
3442 3676 3.303526 GGTACCCGCGCATATAAACTTTG 60.304 47.826 8.75 0.00 0.00 2.77
3443 3677 2.361789 ACCCGCGCATATAAACTTTGT 58.638 42.857 8.75 0.00 0.00 2.83
3444 3678 2.353579 ACCCGCGCATATAAACTTTGTC 59.646 45.455 8.75 0.00 0.00 3.18
3445 3679 2.598907 CCCGCGCATATAAACTTTGTCG 60.599 50.000 8.75 0.00 0.00 4.35
3446 3680 2.283086 CCGCGCATATAAACTTTGTCGA 59.717 45.455 8.75 0.00 0.00 4.20
3447 3681 3.522362 CGCGCATATAAACTTTGTCGAG 58.478 45.455 8.75 0.00 0.00 4.04
3448 3682 3.000078 CGCGCATATAAACTTTGTCGAGT 60.000 43.478 8.75 0.00 0.00 4.18
3449 3683 4.491924 CGCGCATATAAACTTTGTCGAGTT 60.492 41.667 8.75 0.00 41.44 3.01
3450 3684 4.723862 GCGCATATAAACTTTGTCGAGTTG 59.276 41.667 0.30 0.00 39.68 3.16
3451 3685 5.670341 GCGCATATAAACTTTGTCGAGTTGT 60.670 40.000 0.30 0.00 39.68 3.32
3452 3686 6.454583 GCGCATATAAACTTTGTCGAGTTGTA 60.455 38.462 0.30 0.00 39.68 2.41
3453 3687 7.618442 CGCATATAAACTTTGTCGAGTTGTAT 58.382 34.615 0.00 0.00 39.68 2.29
3454 3688 8.748582 CGCATATAAACTTTGTCGAGTTGTATA 58.251 33.333 0.00 0.00 39.68 1.47
3478 3712 6.707440 ATGATTAAAGTTGTGTGTTGGACA 57.293 33.333 0.00 0.00 0.00 4.02
3507 3741 9.586435 ACTTCAAAGTAGATGTTTTTCTTTTGG 57.414 29.630 0.00 0.00 37.52 3.28
3508 3742 8.940768 TTCAAAGTAGATGTTTTTCTTTTGGG 57.059 30.769 0.00 0.00 30.02 4.12
3509 3743 8.299990 TCAAAGTAGATGTTTTTCTTTTGGGA 57.700 30.769 0.00 0.00 30.02 4.37
3510 3744 8.754080 TCAAAGTAGATGTTTTTCTTTTGGGAA 58.246 29.630 0.00 0.00 30.02 3.97
3511 3745 9.377312 CAAAGTAGATGTTTTTCTTTTGGGAAA 57.623 29.630 0.00 0.00 33.98 3.13
3512 3746 9.952030 AAAGTAGATGTTTTTCTTTTGGGAAAA 57.048 25.926 0.00 0.00 41.54 2.29
3517 3751 9.460019 AGATGTTTTTCTTTTGGGAAAATTCAA 57.540 25.926 3.74 0.00 42.38 2.69
3526 3760 9.384764 TCTTTTGGGAAAATTCAAAATAAACGT 57.615 25.926 3.95 0.00 40.58 3.99
3527 3761 9.995957 CTTTTGGGAAAATTCAAAATAAACGTT 57.004 25.926 0.00 0.00 40.58 3.99
3531 3765 9.262358 TGGGAAAATTCAAAATAAACGTTTAGG 57.738 29.630 23.78 13.95 0.00 2.69
3532 3766 8.225107 GGGAAAATTCAAAATAAACGTTTAGGC 58.775 33.333 23.78 4.49 0.00 3.93
3533 3767 8.225107 GGAAAATTCAAAATAAACGTTTAGGCC 58.775 33.333 23.78 0.00 0.00 5.19
3534 3768 8.896320 AAAATTCAAAATAAACGTTTAGGCCT 57.104 26.923 23.78 11.78 0.00 5.19
3535 3769 8.528917 AAATTCAAAATAAACGTTTAGGCCTC 57.471 30.769 23.78 0.00 0.00 4.70
3536 3770 6.887626 TTCAAAATAAACGTTTAGGCCTCT 57.112 33.333 23.78 5.43 0.00 3.69
3537 3771 6.887626 TCAAAATAAACGTTTAGGCCTCTT 57.112 33.333 23.78 10.91 0.00 2.85
3538 3772 7.279750 TCAAAATAAACGTTTAGGCCTCTTT 57.720 32.000 23.78 15.56 0.00 2.52
3539 3773 7.142680 TCAAAATAAACGTTTAGGCCTCTTTG 58.857 34.615 23.78 21.03 0.00 2.77
3540 3774 6.887626 AAATAAACGTTTAGGCCTCTTTGA 57.112 33.333 23.78 0.76 0.00 2.69
3541 3775 7.462571 AAATAAACGTTTAGGCCTCTTTGAT 57.537 32.000 23.78 3.12 0.00 2.57
3542 3776 7.462571 AATAAACGTTTAGGCCTCTTTGATT 57.537 32.000 23.78 8.75 0.00 2.57
3543 3777 5.372547 AAACGTTTAGGCCTCTTTGATTC 57.627 39.130 9.68 0.00 0.00 2.52
3544 3778 4.015872 ACGTTTAGGCCTCTTTGATTCA 57.984 40.909 9.68 0.00 0.00 2.57
3545 3779 3.751698 ACGTTTAGGCCTCTTTGATTCAC 59.248 43.478 9.68 0.00 0.00 3.18
3546 3780 3.751175 CGTTTAGGCCTCTTTGATTCACA 59.249 43.478 9.68 0.00 0.00 3.58
3547 3781 4.396166 CGTTTAGGCCTCTTTGATTCACAT 59.604 41.667 9.68 0.00 0.00 3.21
3548 3782 5.447818 CGTTTAGGCCTCTTTGATTCACATC 60.448 44.000 9.68 0.00 0.00 3.06
3549 3783 3.726557 AGGCCTCTTTGATTCACATCA 57.273 42.857 0.00 0.00 37.67 3.07
3550 3784 4.246712 AGGCCTCTTTGATTCACATCAT 57.753 40.909 0.00 0.00 39.28 2.45
3551 3785 4.607239 AGGCCTCTTTGATTCACATCATT 58.393 39.130 0.00 0.00 39.28 2.57
3552 3786 4.643784 AGGCCTCTTTGATTCACATCATTC 59.356 41.667 0.00 0.00 39.28 2.67
3553 3787 4.643784 GGCCTCTTTGATTCACATCATTCT 59.356 41.667 0.00 0.00 39.28 2.40
3554 3788 5.824624 GGCCTCTTTGATTCACATCATTCTA 59.175 40.000 0.00 0.00 39.28 2.10
3555 3789 6.319658 GGCCTCTTTGATTCACATCATTCTAA 59.680 38.462 0.00 0.00 39.28 2.10
3556 3790 7.148018 GGCCTCTTTGATTCACATCATTCTAAA 60.148 37.037 0.00 0.00 39.28 1.85
3557 3791 8.246180 GCCTCTTTGATTCACATCATTCTAAAA 58.754 33.333 0.00 0.00 39.28 1.52
3611 3845 9.927668 ATTGTGTATAAAAACAAAGGATTGGAG 57.072 29.630 0.00 0.00 39.57 3.86
3612 3846 7.891561 TGTGTATAAAAACAAAGGATTGGAGG 58.108 34.615 0.00 0.00 41.01 4.30
3613 3847 7.726291 TGTGTATAAAAACAAAGGATTGGAGGA 59.274 33.333 0.00 0.00 41.01 3.71
3614 3848 8.749354 GTGTATAAAAACAAAGGATTGGAGGAT 58.251 33.333 0.00 0.00 41.01 3.24
3615 3849 9.983024 TGTATAAAAACAAAGGATTGGAGGATA 57.017 29.630 0.00 0.00 41.01 2.59
3628 3862 9.827198 AGGATTGGAGGATATAAATAAATTGCA 57.173 29.630 0.00 0.00 0.00 4.08
3631 3865 9.933723 ATTGGAGGATATAAATAAATTGCAAGC 57.066 29.630 4.94 0.00 0.00 4.01
3632 3866 8.710749 TGGAGGATATAAATAAATTGCAAGCT 57.289 30.769 4.94 0.00 0.00 3.74
3633 3867 9.146586 TGGAGGATATAAATAAATTGCAAGCTT 57.853 29.630 4.94 3.47 0.00 3.74
3634 3868 9.415544 GGAGGATATAAATAAATTGCAAGCTTG 57.584 33.333 22.44 22.44 0.00 4.01
3635 3869 9.415544 GAGGATATAAATAAATTGCAAGCTTGG 57.584 33.333 27.10 9.80 0.00 3.61
3636 3870 8.370182 AGGATATAAATAAATTGCAAGCTTGGG 58.630 33.333 27.10 3.84 0.00 4.12
3637 3871 8.150296 GGATATAAATAAATTGCAAGCTTGGGT 58.850 33.333 27.10 0.00 0.00 4.51
3638 3872 8.891671 ATATAAATAAATTGCAAGCTTGGGTG 57.108 30.769 27.10 3.41 0.00 4.61
3639 3873 4.622260 AATAAATTGCAAGCTTGGGTGT 57.378 36.364 27.10 0.00 0.00 4.16
3640 3874 4.622260 ATAAATTGCAAGCTTGGGTGTT 57.378 36.364 27.10 0.00 0.00 3.32
3641 3875 3.280197 AAATTGCAAGCTTGGGTGTTT 57.720 38.095 27.10 3.61 0.00 2.83
3642 3876 2.531522 ATTGCAAGCTTGGGTGTTTC 57.468 45.000 27.10 9.58 0.00 2.78
3643 3877 0.102120 TTGCAAGCTTGGGTGTTTCG 59.898 50.000 27.10 0.00 0.00 3.46
3644 3878 1.034838 TGCAAGCTTGGGTGTTTCGT 61.035 50.000 27.10 0.00 0.00 3.85
3645 3879 0.102300 GCAAGCTTGGGTGTTTCGTT 59.898 50.000 27.10 0.00 0.00 3.85
3646 3880 1.864029 GCAAGCTTGGGTGTTTCGTTC 60.864 52.381 27.10 2.68 0.00 3.95
3647 3881 1.403679 CAAGCTTGGGTGTTTCGTTCA 59.596 47.619 19.14 0.00 0.00 3.18
3648 3882 1.021968 AGCTTGGGTGTTTCGTTCAC 58.978 50.000 0.00 0.00 35.36 3.18
3649 3883 0.736053 GCTTGGGTGTTTCGTTCACA 59.264 50.000 8.82 0.00 37.52 3.58
3650 3884 1.268539 GCTTGGGTGTTTCGTTCACAG 60.269 52.381 8.82 1.57 37.52 3.66
3651 3885 1.333619 CTTGGGTGTTTCGTTCACAGG 59.666 52.381 8.82 0.00 37.52 4.00
3652 3886 0.542333 TGGGTGTTTCGTTCACAGGA 59.458 50.000 8.82 0.00 37.52 3.86
3653 3887 1.065345 TGGGTGTTTCGTTCACAGGAA 60.065 47.619 8.82 0.00 37.52 3.36
3654 3888 2.227194 GGGTGTTTCGTTCACAGGAAT 58.773 47.619 8.82 0.00 37.52 3.01
3655 3889 3.181453 TGGGTGTTTCGTTCACAGGAATA 60.181 43.478 8.82 0.00 37.52 1.75
3656 3890 3.435671 GGGTGTTTCGTTCACAGGAATAG 59.564 47.826 8.82 0.00 37.52 1.73
3657 3891 4.312443 GGTGTTTCGTTCACAGGAATAGA 58.688 43.478 8.82 0.00 37.52 1.98
3658 3892 4.753107 GGTGTTTCGTTCACAGGAATAGAA 59.247 41.667 8.82 0.00 37.52 2.10
3659 3893 5.237779 GGTGTTTCGTTCACAGGAATAGAAA 59.762 40.000 8.82 0.00 38.73 2.52
3660 3894 6.238538 GGTGTTTCGTTCACAGGAATAGAAAA 60.239 38.462 10.40 0.00 40.62 2.29
3661 3895 7.190871 GTGTTTCGTTCACAGGAATAGAAAAA 58.809 34.615 10.40 5.49 40.62 1.94
3662 3896 7.165318 GTGTTTCGTTCACAGGAATAGAAAAAC 59.835 37.037 11.88 11.88 40.62 2.43
3663 3897 6.928979 TTCGTTCACAGGAATAGAAAAACA 57.071 33.333 0.00 0.00 35.05 2.83
3664 3898 6.928979 TCGTTCACAGGAATAGAAAAACAA 57.071 33.333 0.00 0.00 35.05 2.83
3665 3899 7.323049 TCGTTCACAGGAATAGAAAAACAAA 57.677 32.000 0.00 0.00 35.05 2.83
3666 3900 7.763356 TCGTTCACAGGAATAGAAAAACAAAA 58.237 30.769 0.00 0.00 35.05 2.44
3667 3901 8.244802 TCGTTCACAGGAATAGAAAAACAAAAA 58.755 29.630 0.00 0.00 35.05 1.94
3668 3902 8.531530 CGTTCACAGGAATAGAAAAACAAAAAG 58.468 33.333 0.00 0.00 35.05 2.27
3669 3903 8.817100 GTTCACAGGAATAGAAAAACAAAAAGG 58.183 33.333 0.00 0.00 35.05 3.11
3670 3904 8.073467 TCACAGGAATAGAAAAACAAAAAGGT 57.927 30.769 0.00 0.00 0.00 3.50
3671 3905 8.194769 TCACAGGAATAGAAAAACAAAAAGGTC 58.805 33.333 0.00 0.00 0.00 3.85
3672 3906 7.978975 CACAGGAATAGAAAAACAAAAAGGTCA 59.021 33.333 0.00 0.00 0.00 4.02
3673 3907 8.704668 ACAGGAATAGAAAAACAAAAAGGTCAT 58.295 29.630 0.00 0.00 0.00 3.06
3687 3921 9.762381 ACAAAAAGGTCATAATAAATAGGGTCA 57.238 29.630 0.00 0.00 0.00 4.02
3707 3941 9.108284 AGGGTCAAATCAAAATTAAACAACAAG 57.892 29.630 0.00 0.00 0.00 3.16
3708 3942 9.103861 GGGTCAAATCAAAATTAAACAACAAGA 57.896 29.630 0.00 0.00 0.00 3.02
3715 3949 8.925161 TCAAAATTAAACAACAAGAGAAGGTG 57.075 30.769 0.00 0.00 0.00 4.00
3716 3950 7.491048 TCAAAATTAAACAACAAGAGAAGGTGC 59.509 33.333 0.00 0.00 0.00 5.01
3717 3951 6.463995 AATTAAACAACAAGAGAAGGTGCA 57.536 33.333 0.00 0.00 0.00 4.57
3718 3952 5.906113 TTAAACAACAAGAGAAGGTGCAA 57.094 34.783 0.00 0.00 0.00 4.08
3719 3953 4.799564 AAACAACAAGAGAAGGTGCAAA 57.200 36.364 0.00 0.00 0.00 3.68
3720 3954 3.782889 ACAACAAGAGAAGGTGCAAAC 57.217 42.857 0.00 0.00 0.00 2.93
3721 3955 3.088532 ACAACAAGAGAAGGTGCAAACA 58.911 40.909 0.00 0.00 0.00 2.83
3722 3956 3.129287 ACAACAAGAGAAGGTGCAAACAG 59.871 43.478 0.00 0.00 0.00 3.16
3723 3957 3.281727 ACAAGAGAAGGTGCAAACAGA 57.718 42.857 0.00 0.00 0.00 3.41
3724 3958 3.209410 ACAAGAGAAGGTGCAAACAGAG 58.791 45.455 0.00 0.00 0.00 3.35
3725 3959 3.209410 CAAGAGAAGGTGCAAACAGAGT 58.791 45.455 0.00 0.00 0.00 3.24
3726 3960 3.567478 AGAGAAGGTGCAAACAGAGTT 57.433 42.857 0.00 0.00 0.00 3.01
3727 3961 3.209410 AGAGAAGGTGCAAACAGAGTTG 58.791 45.455 0.00 0.00 0.00 3.16
3728 3962 3.118261 AGAGAAGGTGCAAACAGAGTTGA 60.118 43.478 0.00 0.00 0.00 3.18
3729 3963 3.620488 AGAAGGTGCAAACAGAGTTGAA 58.380 40.909 0.00 0.00 0.00 2.69
3730 3964 4.210331 AGAAGGTGCAAACAGAGTTGAAT 58.790 39.130 0.00 0.00 0.00 2.57
3731 3965 4.276926 AGAAGGTGCAAACAGAGTTGAATC 59.723 41.667 0.00 0.00 0.00 2.52
3732 3966 3.554934 AGGTGCAAACAGAGTTGAATCA 58.445 40.909 0.00 0.00 0.00 2.57
3733 3967 3.567164 AGGTGCAAACAGAGTTGAATCAG 59.433 43.478 0.00 0.00 0.00 2.90
3734 3968 3.565482 GGTGCAAACAGAGTTGAATCAGA 59.435 43.478 0.00 0.00 0.00 3.27
3735 3969 4.036734 GGTGCAAACAGAGTTGAATCAGAA 59.963 41.667 0.00 0.00 0.00 3.02
3736 3970 5.278660 GGTGCAAACAGAGTTGAATCAGAAT 60.279 40.000 0.00 0.00 0.00 2.40
3737 3971 5.855395 GTGCAAACAGAGTTGAATCAGAATC 59.145 40.000 0.00 0.00 0.00 2.52
3738 3972 5.084722 GCAAACAGAGTTGAATCAGAATCG 58.915 41.667 0.00 0.00 0.00 3.34
3739 3973 5.106948 GCAAACAGAGTTGAATCAGAATCGA 60.107 40.000 0.00 0.00 0.00 3.59
3740 3974 6.566564 GCAAACAGAGTTGAATCAGAATCGAA 60.567 38.462 0.00 0.00 0.00 3.71
3741 3975 6.473397 AACAGAGTTGAATCAGAATCGAAC 57.527 37.500 0.00 0.00 0.00 3.95
3742 3976 4.932200 ACAGAGTTGAATCAGAATCGAACC 59.068 41.667 0.00 0.00 0.00 3.62
3743 3977 4.931601 CAGAGTTGAATCAGAATCGAACCA 59.068 41.667 0.00 0.00 0.00 3.67
3744 3978 4.932200 AGAGTTGAATCAGAATCGAACCAC 59.068 41.667 0.00 0.00 0.00 4.16
3745 3979 4.641396 AGTTGAATCAGAATCGAACCACA 58.359 39.130 0.00 0.00 0.00 4.17
3746 3980 5.248640 AGTTGAATCAGAATCGAACCACAT 58.751 37.500 0.00 0.00 0.00 3.21
3747 3981 5.122869 AGTTGAATCAGAATCGAACCACATG 59.877 40.000 0.00 0.00 0.00 3.21
3748 3982 4.831107 TGAATCAGAATCGAACCACATGA 58.169 39.130 0.00 0.00 0.00 3.07
3749 3983 5.244755 TGAATCAGAATCGAACCACATGAA 58.755 37.500 0.00 0.00 0.00 2.57
3750 3984 5.704978 TGAATCAGAATCGAACCACATGAAA 59.295 36.000 0.00 0.00 0.00 2.69
3751 3985 6.206438 TGAATCAGAATCGAACCACATGAAAA 59.794 34.615 0.00 0.00 0.00 2.29
3752 3986 6.764308 ATCAGAATCGAACCACATGAAAAT 57.236 33.333 0.00 0.00 0.00 1.82
3753 3987 7.864108 ATCAGAATCGAACCACATGAAAATA 57.136 32.000 0.00 0.00 0.00 1.40
3754 3988 7.072177 TCAGAATCGAACCACATGAAAATAC 57.928 36.000 0.00 0.00 0.00 1.89
3755 3989 6.652900 TCAGAATCGAACCACATGAAAATACA 59.347 34.615 0.00 0.00 0.00 2.29
3756 3990 7.336679 TCAGAATCGAACCACATGAAAATACAT 59.663 33.333 0.00 0.00 0.00 2.29
3757 3991 8.611757 CAGAATCGAACCACATGAAAATACATA 58.388 33.333 0.00 0.00 0.00 2.29
3758 3992 9.173021 AGAATCGAACCACATGAAAATACATAA 57.827 29.630 0.00 0.00 0.00 1.90
3759 3993 9.950680 GAATCGAACCACATGAAAATACATAAT 57.049 29.630 0.00 0.00 0.00 1.28
3763 3997 9.169468 CGAACCACATGAAAATACATAATTAGC 57.831 33.333 0.00 0.00 0.00 3.09
3766 4000 9.970395 ACCACATGAAAATACATAATTAGCATG 57.030 29.630 0.00 0.00 40.98 4.06
3767 4001 9.970395 CCACATGAAAATACATAATTAGCATGT 57.030 29.630 0.00 0.00 44.68 3.21
3787 4021 7.361889 CATGTTATCATGGCACTAAGATCTC 57.638 40.000 0.00 0.00 45.30 2.75
3788 4022 6.484364 TGTTATCATGGCACTAAGATCTCA 57.516 37.500 0.00 0.00 0.00 3.27
3789 4023 6.519382 TGTTATCATGGCACTAAGATCTCAG 58.481 40.000 0.00 0.00 0.00 3.35
3790 4024 6.098838 TGTTATCATGGCACTAAGATCTCAGT 59.901 38.462 0.00 0.00 0.00 3.41
3791 4025 4.662468 TCATGGCACTAAGATCTCAGTC 57.338 45.455 0.00 0.00 0.00 3.51
3792 4026 4.285020 TCATGGCACTAAGATCTCAGTCT 58.715 43.478 0.00 0.00 0.00 3.24
3793 4027 4.340666 TCATGGCACTAAGATCTCAGTCTC 59.659 45.833 0.00 0.00 0.00 3.36
3794 4028 2.685388 TGGCACTAAGATCTCAGTCTCG 59.315 50.000 0.00 0.00 0.00 4.04
3795 4029 2.685897 GGCACTAAGATCTCAGTCTCGT 59.314 50.000 0.00 0.00 0.00 4.18
3796 4030 3.129638 GGCACTAAGATCTCAGTCTCGTT 59.870 47.826 0.00 0.00 0.00 3.85
3797 4031 4.335874 GGCACTAAGATCTCAGTCTCGTTA 59.664 45.833 0.00 0.00 0.00 3.18
3798 4032 5.009210 GGCACTAAGATCTCAGTCTCGTTAT 59.991 44.000 0.00 0.00 0.00 1.89
3799 4033 6.460399 GGCACTAAGATCTCAGTCTCGTTATT 60.460 42.308 0.00 0.00 0.00 1.40
3800 4034 6.635239 GCACTAAGATCTCAGTCTCGTTATTC 59.365 42.308 0.00 0.00 0.00 1.75
3801 4035 7.679875 GCACTAAGATCTCAGTCTCGTTATTCA 60.680 40.741 0.00 0.00 0.00 2.57
3802 4036 8.349245 CACTAAGATCTCAGTCTCGTTATTCAT 58.651 37.037 0.00 0.00 0.00 2.57
3803 4037 8.564574 ACTAAGATCTCAGTCTCGTTATTCATC 58.435 37.037 0.00 0.00 0.00 2.92
3804 4038 5.996219 AGATCTCAGTCTCGTTATTCATCG 58.004 41.667 0.00 0.00 0.00 3.84
3805 4039 5.529430 AGATCTCAGTCTCGTTATTCATCGT 59.471 40.000 0.00 0.00 0.00 3.73
3806 4040 6.706716 AGATCTCAGTCTCGTTATTCATCGTA 59.293 38.462 0.00 0.00 0.00 3.43
3807 4041 6.862711 TCTCAGTCTCGTTATTCATCGTAT 57.137 37.500 0.00 0.00 0.00 3.06
3808 4042 6.659776 TCTCAGTCTCGTTATTCATCGTATG 58.340 40.000 0.00 0.00 0.00 2.39
3809 4043 5.758924 TCAGTCTCGTTATTCATCGTATGG 58.241 41.667 0.00 0.00 0.00 2.74
3810 4044 5.529800 TCAGTCTCGTTATTCATCGTATGGA 59.470 40.000 0.00 0.00 0.00 3.41
3811 4045 6.206829 TCAGTCTCGTTATTCATCGTATGGAT 59.793 38.462 0.00 0.00 35.09 3.41
3812 4046 6.863645 CAGTCTCGTTATTCATCGTATGGATT 59.136 38.462 0.00 0.00 31.28 3.01
3813 4047 7.382488 CAGTCTCGTTATTCATCGTATGGATTT 59.618 37.037 0.00 0.00 31.28 2.17
3814 4048 8.573885 AGTCTCGTTATTCATCGTATGGATTTA 58.426 33.333 0.00 0.00 31.28 1.40
3815 4049 9.188588 GTCTCGTTATTCATCGTATGGATTTAA 57.811 33.333 0.00 0.00 31.28 1.52
3816 4050 9.752961 TCTCGTTATTCATCGTATGGATTTAAA 57.247 29.630 0.00 0.00 31.28 1.52
3823 4057 8.801882 TTCATCGTATGGATTTAAAAAGAGGT 57.198 30.769 0.00 0.00 31.28 3.85
3824 4058 8.433421 TCATCGTATGGATTTAAAAAGAGGTC 57.567 34.615 0.00 0.00 31.28 3.85
3825 4059 8.265055 TCATCGTATGGATTTAAAAAGAGGTCT 58.735 33.333 0.00 0.00 31.28 3.85
3826 4060 9.542462 CATCGTATGGATTTAAAAAGAGGTCTA 57.458 33.333 0.00 0.00 31.28 2.59
3828 4062 9.595823 TCGTATGGATTTAAAAAGAGGTCTAAG 57.404 33.333 0.00 0.00 0.00 2.18
3829 4063 9.379791 CGTATGGATTTAAAAAGAGGTCTAAGT 57.620 33.333 0.00 0.00 0.00 2.24
3839 4073 8.669946 AAAAAGAGGTCTAAGTTTTCTCTCTG 57.330 34.615 0.00 0.00 34.15 3.35
3840 4074 7.604657 AAAGAGGTCTAAGTTTTCTCTCTGA 57.395 36.000 0.00 0.00 34.15 3.27
3841 4075 7.604657 AAGAGGTCTAAGTTTTCTCTCTGAA 57.395 36.000 0.00 0.00 34.15 3.02
3842 4076 7.604657 AGAGGTCTAAGTTTTCTCTCTGAAA 57.395 36.000 0.00 0.00 42.33 2.69
3843 4077 7.438564 AGAGGTCTAAGTTTTCTCTCTGAAAC 58.561 38.462 0.00 0.00 43.55 2.78
3844 4078 7.289084 AGAGGTCTAAGTTTTCTCTCTGAAACT 59.711 37.037 0.00 0.00 43.55 2.66
3845 4079 7.797062 AGGTCTAAGTTTTCTCTCTGAAACTT 58.203 34.615 15.71 15.71 43.55 2.66
3846 4080 8.925338 AGGTCTAAGTTTTCTCTCTGAAACTTA 58.075 33.333 16.13 16.13 43.55 2.24
3847 4081 9.198837 GGTCTAAGTTTTCTCTCTGAAACTTAG 57.801 37.037 26.92 26.92 44.43 2.18
3848 4082 9.968870 GTCTAAGTTTTCTCTCTGAAACTTAGA 57.031 33.333 29.18 29.18 46.10 2.10
3849 4083 9.968870 TCTAAGTTTTCTCTCTGAAACTTAGAC 57.031 33.333 29.18 10.90 45.20 2.59
3850 4084 9.198837 CTAAGTTTTCTCTCTGAAACTTAGACC 57.801 37.037 27.92 0.00 44.93 3.85
3851 4085 7.125792 AGTTTTCTCTCTGAAACTTAGACCA 57.874 36.000 0.00 0.00 43.55 4.02
3852 4086 7.565680 AGTTTTCTCTCTGAAACTTAGACCAA 58.434 34.615 0.00 0.00 43.55 3.67
3853 4087 8.047310 AGTTTTCTCTCTGAAACTTAGACCAAA 58.953 33.333 0.00 0.00 43.55 3.28
3854 4088 8.338986 GTTTTCTCTCTGAAACTTAGACCAAAG 58.661 37.037 0.00 0.00 43.55 2.77
3855 4089 6.102897 TCTCTCTGAAACTTAGACCAAAGG 57.897 41.667 0.00 0.00 0.00 3.11
3856 4090 5.839063 TCTCTCTGAAACTTAGACCAAAGGA 59.161 40.000 0.00 0.00 0.00 3.36
3857 4091 6.326583 TCTCTCTGAAACTTAGACCAAAGGAA 59.673 38.462 0.00 0.00 0.00 3.36
3858 4092 6.895782 TCTCTGAAACTTAGACCAAAGGAAA 58.104 36.000 0.00 0.00 0.00 3.13
3859 4093 7.343357 TCTCTGAAACTTAGACCAAAGGAAAA 58.657 34.615 0.00 0.00 0.00 2.29
3860 4094 7.998964 TCTCTGAAACTTAGACCAAAGGAAAAT 59.001 33.333 0.00 0.00 0.00 1.82
3861 4095 8.533569 TCTGAAACTTAGACCAAAGGAAAATT 57.466 30.769 0.00 0.00 0.00 1.82
3862 4096 8.977412 TCTGAAACTTAGACCAAAGGAAAATTT 58.023 29.630 0.00 0.00 0.00 1.82
3863 4097 9.249457 CTGAAACTTAGACCAAAGGAAAATTTC 57.751 33.333 0.00 0.00 0.00 2.17
3877 4111 6.286240 GGAAAATTTCCTTTGCTACATCCT 57.714 37.500 17.01 0.00 46.57 3.24
3878 4112 6.701340 GGAAAATTTCCTTTGCTACATCCTT 58.299 36.000 17.01 0.00 46.57 3.36
3879 4113 7.161404 GGAAAATTTCCTTTGCTACATCCTTT 58.839 34.615 17.01 0.00 46.57 3.11
3880 4114 7.661437 GGAAAATTTCCTTTGCTACATCCTTTT 59.339 33.333 17.01 0.00 46.57 2.27
3881 4115 9.705290 GAAAATTTCCTTTGCTACATCCTTTTA 57.295 29.630 0.00 0.00 0.00 1.52
3883 4117 9.710900 AAATTTCCTTTGCTACATCCTTTTAAG 57.289 29.630 0.00 0.00 0.00 1.85
3885 4119 4.705023 TCCTTTGCTACATCCTTTTAAGGC 59.295 41.667 3.56 0.00 46.06 4.35
3886 4120 4.142160 CCTTTGCTACATCCTTTTAAGGCC 60.142 45.833 0.00 0.00 46.06 5.19
3887 4121 4.316025 TTGCTACATCCTTTTAAGGCCT 57.684 40.909 0.00 0.00 46.06 5.19
3888 4122 4.316025 TGCTACATCCTTTTAAGGCCTT 57.684 40.909 24.18 24.18 46.06 4.35
3889 4123 5.444744 TGCTACATCCTTTTAAGGCCTTA 57.555 39.130 21.68 21.68 46.06 2.69
3890 4124 5.822204 TGCTACATCCTTTTAAGGCCTTAA 58.178 37.500 30.16 30.16 46.06 1.85
3891 4125 6.249951 TGCTACATCCTTTTAAGGCCTTAAA 58.750 36.000 36.22 36.22 46.06 1.52
3892 4126 6.377146 TGCTACATCCTTTTAAGGCCTTAAAG 59.623 38.462 36.75 30.44 46.06 1.85
3893 4127 6.183360 GCTACATCCTTTTAAGGCCTTAAAGG 60.183 42.308 36.03 36.03 46.06 3.11
3894 4128 5.651303 ACATCCTTTTAAGGCCTTAAAGGT 58.349 37.500 37.78 29.60 46.06 3.50
3895 4129 5.480422 ACATCCTTTTAAGGCCTTAAAGGTG 59.520 40.000 37.78 34.11 46.06 4.00
3896 4130 5.327737 TCCTTTTAAGGCCTTAAAGGTGA 57.672 39.130 37.78 32.64 46.06 4.02
3897 4131 5.899278 TCCTTTTAAGGCCTTAAAGGTGAT 58.101 37.500 37.78 14.45 46.06 3.06
3898 4132 5.714806 TCCTTTTAAGGCCTTAAAGGTGATG 59.285 40.000 37.78 28.65 46.06 3.07
3899 4133 5.105351 CCTTTTAAGGCCTTAAAGGTGATGG 60.105 44.000 37.78 29.52 43.36 3.51
3900 4134 4.938575 TTAAGGCCTTAAAGGTGATGGA 57.061 40.909 31.37 8.66 37.80 3.41
3901 4135 3.372440 AAGGCCTTAAAGGTGATGGAG 57.628 47.619 18.87 0.00 37.80 3.86
3902 4136 2.562296 AGGCCTTAAAGGTGATGGAGA 58.438 47.619 0.00 0.00 37.80 3.71
3903 4137 3.126453 AGGCCTTAAAGGTGATGGAGAT 58.874 45.455 0.00 0.00 37.80 2.75
3904 4138 3.529319 AGGCCTTAAAGGTGATGGAGATT 59.471 43.478 0.00 0.00 37.80 2.40
3905 4139 4.017130 AGGCCTTAAAGGTGATGGAGATTT 60.017 41.667 0.00 0.00 37.80 2.17
3906 4140 4.339530 GGCCTTAAAGGTGATGGAGATTTC 59.660 45.833 0.00 0.00 37.80 2.17
3907 4141 4.949856 GCCTTAAAGGTGATGGAGATTTCA 59.050 41.667 0.00 0.00 37.80 2.69
3908 4142 5.595952 GCCTTAAAGGTGATGGAGATTTCAT 59.404 40.000 0.00 0.00 37.80 2.57
3909 4143 6.097412 GCCTTAAAGGTGATGGAGATTTCATT 59.903 38.462 0.00 0.00 37.80 2.57
3910 4144 7.364144 GCCTTAAAGGTGATGGAGATTTCATTT 60.364 37.037 0.00 0.00 37.80 2.32
3911 4145 8.534496 CCTTAAAGGTGATGGAGATTTCATTTT 58.466 33.333 0.00 0.00 0.00 1.82
3912 4146 9.933723 CTTAAAGGTGATGGAGATTTCATTTTT 57.066 29.630 0.00 0.00 0.00 1.94
3913 4147 9.927668 TTAAAGGTGATGGAGATTTCATTTTTC 57.072 29.630 0.00 0.00 0.00 2.29
3914 4148 7.543359 AAGGTGATGGAGATTTCATTTTTCA 57.457 32.000 0.00 0.00 0.00 2.69
3915 4149 7.729124 AGGTGATGGAGATTTCATTTTTCAT 57.271 32.000 0.00 0.00 0.00 2.57
3916 4150 8.827832 AGGTGATGGAGATTTCATTTTTCATA 57.172 30.769 0.00 0.00 0.00 2.15
3917 4151 8.689972 AGGTGATGGAGATTTCATTTTTCATAC 58.310 33.333 0.00 0.00 0.00 2.39
3918 4152 8.689972 GGTGATGGAGATTTCATTTTTCATACT 58.310 33.333 0.00 0.00 0.00 2.12
3919 4153 9.512435 GTGATGGAGATTTCATTTTTCATACTG 57.488 33.333 0.00 0.00 0.00 2.74
3920 4154 9.246670 TGATGGAGATTTCATTTTTCATACTGT 57.753 29.630 0.00 0.00 0.00 3.55
3921 4155 9.512435 GATGGAGATTTCATTTTTCATACTGTG 57.488 33.333 0.00 0.00 0.00 3.66
3922 4156 7.315142 TGGAGATTTCATTTTTCATACTGTGC 58.685 34.615 0.00 0.00 0.00 4.57
3923 4157 6.753744 GGAGATTTCATTTTTCATACTGTGCC 59.246 38.462 0.00 0.00 0.00 5.01
3924 4158 7.230849 AGATTTCATTTTTCATACTGTGCCA 57.769 32.000 0.00 0.00 0.00 4.92
3925 4159 7.318141 AGATTTCATTTTTCATACTGTGCCAG 58.682 34.615 1.16 1.16 37.52 4.85
3926 4160 5.389859 TTCATTTTTCATACTGTGCCAGG 57.610 39.130 7.06 0.00 35.51 4.45
3927 4161 3.763360 TCATTTTTCATACTGTGCCAGGG 59.237 43.478 7.06 0.00 35.51 4.45
3928 4162 3.517296 TTTTTCATACTGTGCCAGGGA 57.483 42.857 7.06 0.00 35.51 4.20
3929 4163 2.787473 TTTCATACTGTGCCAGGGAG 57.213 50.000 7.06 0.00 35.51 4.30
3930 4164 0.253044 TTCATACTGTGCCAGGGAGC 59.747 55.000 7.06 0.00 35.51 4.70
3931 4165 0.618680 TCATACTGTGCCAGGGAGCT 60.619 55.000 7.06 0.00 35.51 4.09
3932 4166 0.463295 CATACTGTGCCAGGGAGCTG 60.463 60.000 0.00 0.00 35.51 4.24
3933 4167 2.262774 ATACTGTGCCAGGGAGCTGC 62.263 60.000 0.00 0.00 35.51 5.25
3934 4168 4.031129 CTGTGCCAGGGAGCTGCT 62.031 66.667 0.00 0.00 0.00 4.24
3935 4169 2.607442 TGTGCCAGGGAGCTGCTA 60.607 61.111 0.15 0.00 0.00 3.49
3936 4170 1.980784 CTGTGCCAGGGAGCTGCTAT 61.981 60.000 0.15 0.00 0.00 2.97
3937 4171 1.525535 GTGCCAGGGAGCTGCTATG 60.526 63.158 0.15 4.58 0.00 2.23
3938 4172 1.997311 TGCCAGGGAGCTGCTATGT 60.997 57.895 0.15 0.00 0.00 2.29
3939 4173 1.225704 GCCAGGGAGCTGCTATGTT 59.774 57.895 0.15 0.00 0.00 2.71
3940 4174 0.394899 GCCAGGGAGCTGCTATGTTT 60.395 55.000 0.15 0.00 0.00 2.83
3941 4175 1.386533 CCAGGGAGCTGCTATGTTTG 58.613 55.000 0.15 0.00 0.00 2.93
3942 4176 0.737219 CAGGGAGCTGCTATGTTTGC 59.263 55.000 0.15 0.00 0.00 3.68
3943 4177 0.329261 AGGGAGCTGCTATGTTTGCA 59.671 50.000 0.15 0.00 38.81 4.08
3949 4183 3.344703 TGCTATGTTTGCAGGTGCT 57.655 47.368 3.18 0.00 42.66 4.40
3950 4184 1.619654 TGCTATGTTTGCAGGTGCTT 58.380 45.000 3.18 0.00 42.66 3.91
3951 4185 2.789213 TGCTATGTTTGCAGGTGCTTA 58.211 42.857 3.18 0.00 42.66 3.09
3952 4186 3.355378 TGCTATGTTTGCAGGTGCTTAT 58.645 40.909 3.18 0.00 42.66 1.73
3953 4187 3.763360 TGCTATGTTTGCAGGTGCTTATT 59.237 39.130 3.18 0.00 42.66 1.40
3954 4188 4.946772 TGCTATGTTTGCAGGTGCTTATTA 59.053 37.500 3.18 0.00 42.66 0.98
3955 4189 5.066375 TGCTATGTTTGCAGGTGCTTATTAG 59.934 40.000 3.18 0.53 42.66 1.73
3956 4190 8.332831 TGCTATGTTTGCAGGTGCTTATTAGC 62.333 42.308 3.18 9.63 40.57 3.09
3971 4205 7.851387 GCTTATTAGCCTAGAACAGAGTTTT 57.149 36.000 0.00 0.00 41.74 2.43
3972 4206 8.270080 GCTTATTAGCCTAGAACAGAGTTTTT 57.730 34.615 0.00 0.00 41.74 1.94
3994 4228 2.766345 TTTTGAATTGAGGGGCATGC 57.234 45.000 9.90 9.90 0.00 4.06
3995 4229 0.903942 TTTGAATTGAGGGGCATGCC 59.096 50.000 29.47 29.47 0.00 4.40
4005 4239 2.441901 GGCATGCCCCCGATTTCA 60.442 61.111 27.24 0.00 0.00 2.69
4006 4240 1.833934 GGCATGCCCCCGATTTCAT 60.834 57.895 27.24 0.00 0.00 2.57
4007 4241 1.402107 GGCATGCCCCCGATTTCATT 61.402 55.000 27.24 0.00 0.00 2.57
4008 4242 0.465287 GCATGCCCCCGATTTCATTT 59.535 50.000 6.36 0.00 0.00 2.32
4009 4243 1.538849 GCATGCCCCCGATTTCATTTC 60.539 52.381 6.36 0.00 0.00 2.17
4010 4244 1.755959 CATGCCCCCGATTTCATTTCA 59.244 47.619 0.00 0.00 0.00 2.69
4011 4245 2.157640 TGCCCCCGATTTCATTTCAT 57.842 45.000 0.00 0.00 0.00 2.57
4012 4246 2.465813 TGCCCCCGATTTCATTTCATT 58.534 42.857 0.00 0.00 0.00 2.57
4013 4247 2.168106 TGCCCCCGATTTCATTTCATTG 59.832 45.455 0.00 0.00 0.00 2.82
4014 4248 2.825205 CCCCCGATTTCATTTCATTGC 58.175 47.619 0.00 0.00 0.00 3.56
4015 4249 2.168106 CCCCCGATTTCATTTCATTGCA 59.832 45.455 0.00 0.00 0.00 4.08
4016 4250 3.181463 CCCCCGATTTCATTTCATTGCAT 60.181 43.478 0.00 0.00 0.00 3.96
4017 4251 3.805422 CCCCGATTTCATTTCATTGCATG 59.195 43.478 0.00 0.00 0.00 4.06
4018 4252 4.441773 CCCCGATTTCATTTCATTGCATGA 60.442 41.667 0.00 0.00 37.55 3.07
4019 4253 5.110598 CCCGATTTCATTTCATTGCATGAA 58.889 37.500 0.00 7.27 46.77 2.57
4028 4262 4.952071 TTCATTGCATGAAAGGAAACCA 57.048 36.364 11.08 0.00 45.57 3.67
4029 4263 4.952071 TCATTGCATGAAAGGAAACCAA 57.048 36.364 0.00 0.00 36.11 3.67
4030 4264 5.486735 TCATTGCATGAAAGGAAACCAAT 57.513 34.783 0.00 0.00 36.11 3.16
4031 4265 6.602410 TCATTGCATGAAAGGAAACCAATA 57.398 33.333 0.00 0.00 36.11 1.90
4032 4266 7.002250 TCATTGCATGAAAGGAAACCAATAA 57.998 32.000 0.00 0.00 36.11 1.40
4033 4267 7.448420 TCATTGCATGAAAGGAAACCAATAAA 58.552 30.769 0.00 0.00 36.11 1.40
4034 4268 7.935755 TCATTGCATGAAAGGAAACCAATAAAA 59.064 29.630 0.00 0.00 36.11 1.52
4035 4269 7.489574 TTGCATGAAAGGAAACCAATAAAAC 57.510 32.000 0.00 0.00 0.00 2.43
4036 4270 6.586344 TGCATGAAAGGAAACCAATAAAACA 58.414 32.000 0.00 0.00 0.00 2.83
4037 4271 6.705381 TGCATGAAAGGAAACCAATAAAACAG 59.295 34.615 0.00 0.00 0.00 3.16
4038 4272 6.928492 GCATGAAAGGAAACCAATAAAACAGA 59.072 34.615 0.00 0.00 0.00 3.41
4039 4273 7.603784 GCATGAAAGGAAACCAATAAAACAGAT 59.396 33.333 0.00 0.00 0.00 2.90
4040 4274 9.143631 CATGAAAGGAAACCAATAAAACAGATC 57.856 33.333 0.00 0.00 0.00 2.75
4041 4275 8.243961 TGAAAGGAAACCAATAAAACAGATCA 57.756 30.769 0.00 0.00 0.00 2.92
4042 4276 8.700051 TGAAAGGAAACCAATAAAACAGATCAA 58.300 29.630 0.00 0.00 0.00 2.57
4043 4277 9.196552 GAAAGGAAACCAATAAAACAGATCAAG 57.803 33.333 0.00 0.00 0.00 3.02
4044 4278 7.839680 AGGAAACCAATAAAACAGATCAAGT 57.160 32.000 0.00 0.00 0.00 3.16
4045 4279 8.934023 AGGAAACCAATAAAACAGATCAAGTA 57.066 30.769 0.00 0.00 0.00 2.24
4046 4280 9.533831 AGGAAACCAATAAAACAGATCAAGTAT 57.466 29.630 0.00 0.00 0.00 2.12
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
11 12 4.660938 AAGGAAAGCCGCGGCCTT 62.661 61.111 44.47 38.80 43.17 4.35
12 13 4.660938 AAAGGAAAGCCGCGGCCT 62.661 61.111 44.47 32.61 43.17 5.19
13 14 3.626680 GAAAAGGAAAGCCGCGGCC 62.627 63.158 44.47 29.76 43.17 6.13
14 15 2.126463 GAAAAGGAAAGCCGCGGC 60.126 61.111 42.34 42.34 39.96 6.53
15 16 2.566529 GGAAAAGGAAAGCCGCGG 59.433 61.111 24.05 24.05 39.96 6.46
16 17 1.923227 GAGGGAAAAGGAAAGCCGCG 61.923 60.000 0.00 0.00 39.96 6.46
17 18 1.595993 GGAGGGAAAAGGAAAGCCGC 61.596 60.000 0.00 0.00 39.96 6.53
18 19 0.965866 GGGAGGGAAAAGGAAAGCCG 60.966 60.000 0.00 0.00 39.96 5.52
19 20 0.965866 CGGGAGGGAAAAGGAAAGCC 60.966 60.000 0.00 0.00 0.00 4.35
20 21 0.251209 ACGGGAGGGAAAAGGAAAGC 60.251 55.000 0.00 0.00 0.00 3.51
21 22 2.570302 TCTACGGGAGGGAAAAGGAAAG 59.430 50.000 0.00 0.00 0.00 2.62
22 23 2.570302 CTCTACGGGAGGGAAAAGGAAA 59.430 50.000 0.00 0.00 38.35 3.13
23 24 2.185387 CTCTACGGGAGGGAAAAGGAA 58.815 52.381 0.00 0.00 38.35 3.36
24 25 1.360162 TCTCTACGGGAGGGAAAAGGA 59.640 52.381 0.00 0.00 42.10 3.36
25 26 1.757699 CTCTCTACGGGAGGGAAAAGG 59.242 57.143 1.92 0.00 45.12 3.11
26 27 1.137282 GCTCTCTACGGGAGGGAAAAG 59.863 57.143 11.00 1.66 45.12 2.27
27 28 1.192428 GCTCTCTACGGGAGGGAAAA 58.808 55.000 11.00 0.00 45.12 2.29
86 89 1.606606 GCTACAAGCATCAACGCAAC 58.393 50.000 0.00 0.00 41.89 4.17
87 90 0.521291 GGCTACAAGCATCAACGCAA 59.479 50.000 0.78 0.00 44.75 4.85
88 91 1.305219 GGGCTACAAGCATCAACGCA 61.305 55.000 0.78 0.00 44.75 5.24
118 121 8.507249 CGTCTTTACATTTCTTTCAGATCCTTT 58.493 33.333 0.00 0.00 0.00 3.11
119 122 7.878127 TCGTCTTTACATTTCTTTCAGATCCTT 59.122 33.333 0.00 0.00 0.00 3.36
127 130 9.974750 CCTTATCTTCGTCTTTACATTTCTTTC 57.025 33.333 0.00 0.00 0.00 2.62
128 131 9.503399 ACCTTATCTTCGTCTTTACATTTCTTT 57.497 29.630 0.00 0.00 0.00 2.52
129 132 8.936864 CACCTTATCTTCGTCTTTACATTTCTT 58.063 33.333 0.00 0.00 0.00 2.52
130 133 7.549488 CCACCTTATCTTCGTCTTTACATTTCT 59.451 37.037 0.00 0.00 0.00 2.52
141 144 3.865745 CACACATCCACCTTATCTTCGTC 59.134 47.826 0.00 0.00 0.00 4.20
142 145 3.260884 ACACACATCCACCTTATCTTCGT 59.739 43.478 0.00 0.00 0.00 3.85
144 147 4.579869 ACACACACATCCACCTTATCTTC 58.420 43.478 0.00 0.00 0.00 2.87
145 148 4.640771 ACACACACATCCACCTTATCTT 57.359 40.909 0.00 0.00 0.00 2.40
147 150 3.871594 GCTACACACACATCCACCTTATC 59.128 47.826 0.00 0.00 0.00 1.75
152 155 1.806542 CAAGCTACACACACATCCACC 59.193 52.381 0.00 0.00 0.00 4.61
201 204 1.819305 CGTCCCCATTCCATTCCATCC 60.819 57.143 0.00 0.00 0.00 3.51
206 209 0.465642 GACCCGTCCCCATTCCATTC 60.466 60.000 0.00 0.00 0.00 2.67
207 210 1.211567 TGACCCGTCCCCATTCCATT 61.212 55.000 0.00 0.00 0.00 3.16
222 231 1.425428 CTTCGCCGAAATGCTGACC 59.575 57.895 0.00 0.00 0.00 4.02
286 296 1.140052 TGACTGCTTTTTCCCGAGACA 59.860 47.619 0.00 0.00 0.00 3.41
342 352 5.874261 GCCTCCGGTAGTAGTATTAGTCTAG 59.126 48.000 0.00 0.00 0.00 2.43
356 366 2.829003 TCTGCTCGCCTCCGGTAG 60.829 66.667 0.00 0.00 34.56 3.18
444 474 2.803670 CCAGTCACCACGTACGCG 60.804 66.667 16.72 3.53 44.93 6.01
568 598 1.705745 GAAAAACAGAGGAGGGAGGGT 59.294 52.381 0.00 0.00 0.00 4.34
569 599 1.705186 TGAAAAACAGAGGAGGGAGGG 59.295 52.381 0.00 0.00 0.00 4.30
622 671 3.508474 GAATGGAATTCGCGGGCA 58.492 55.556 6.13 0.00 44.37 5.36
733 783 0.179070 CCCCAAACCAAACCAAACCG 60.179 55.000 0.00 0.00 0.00 4.44
750 800 1.523938 CGGAGAAAATCGAGCCCCC 60.524 63.158 0.00 0.00 0.00 5.40
751 801 2.180862 GCGGAGAAAATCGAGCCCC 61.181 63.158 0.00 0.00 0.00 5.80
812 862 2.335011 GGGCAGTCGGTTTTGTGC 59.665 61.111 0.00 0.00 35.07 4.57
934 996 1.620323 CCTTGCTTTCTTTTCCCCCAG 59.380 52.381 0.00 0.00 0.00 4.45
936 998 2.009681 TCCTTGCTTTCTTTTCCCCC 57.990 50.000 0.00 0.00 0.00 5.40
949 1011 0.241213 GCTTCCGTTTCCTTCCTTGC 59.759 55.000 0.00 0.00 0.00 4.01
950 1012 0.517316 CGCTTCCGTTTCCTTCCTTG 59.483 55.000 0.00 0.00 0.00 3.61
999 1103 2.903855 GGATGGCACCGCTCCATG 60.904 66.667 6.12 0.00 43.90 3.66
1017 1121 0.745128 AGAGCTCGTACACCTCGGAG 60.745 60.000 8.37 0.00 0.00 4.63
1064 1168 1.002087 AGAATCAAGAACCGCGTCCTT 59.998 47.619 4.92 1.93 0.00 3.36
1070 1208 0.794605 GCGCAAGAATCAAGAACCGC 60.795 55.000 0.30 0.00 43.02 5.68
1090 1228 2.546645 CGAAATCGACCGGGGAACGA 62.547 60.000 6.32 11.97 43.70 3.85
1119 1265 3.283684 CCCCGCACAAACGCTCAA 61.284 61.111 0.00 0.00 0.00 3.02
1721 1868 4.410400 CTCCGGTCCAGGTTGCCC 62.410 72.222 0.00 0.00 0.00 5.36
1978 2131 4.318760 CGATTGAACAAGAAACTGCGAGAA 60.319 41.667 0.00 0.00 0.00 2.87
2005 2158 6.348868 GCTGTTCTAGAAGGAAAAATCCTGTG 60.349 42.308 5.12 0.00 40.59 3.66
2012 2165 5.885912 ACACAAGCTGTTCTAGAAGGAAAAA 59.114 36.000 5.12 0.00 0.00 1.94
2017 2174 2.481952 GCACACAAGCTGTTCTAGAAGG 59.518 50.000 5.12 3.28 0.00 3.46
2018 2175 2.481952 GGCACACAAGCTGTTCTAGAAG 59.518 50.000 5.12 0.00 34.17 2.85
2030 2187 1.468520 CGGAAATACAGGGCACACAAG 59.531 52.381 0.00 0.00 0.00 3.16
2075 2232 1.003233 GAAGCCCGAGCCAAGAACT 60.003 57.895 0.00 0.00 41.25 3.01
2085 2245 0.529378 GAAACGTCTAGGAAGCCCGA 59.471 55.000 0.00 0.00 37.58 5.14
2158 2319 3.585289 TGGAGCCAACCATAAGAACTGTA 59.415 43.478 0.00 0.00 34.77 2.74
2189 2354 1.107114 TTGAACTTTTTGCCCGCTCA 58.893 45.000 0.00 0.00 0.00 4.26
2267 2435 9.141400 GCAATTTTACGAGATATTCCTACTAGG 57.859 37.037 0.00 0.00 36.46 3.02
2323 2495 3.493877 GCAGGAGATGATCATTTCGACAG 59.506 47.826 17.41 9.66 0.00 3.51
2334 2506 6.185511 TGAATTCTTTCTTGCAGGAGATGAT 58.814 36.000 7.05 0.00 32.78 2.45
2531 2717 6.777580 GGGCAAGGAAAGGAGATATTCAATTA 59.222 38.462 0.00 0.00 0.00 1.40
2671 2871 1.144936 GCCCTGTGAAGAGGATCGG 59.855 63.158 0.00 0.00 42.67 4.18
3031 3239 1.001181 GAGCAGGAGCAGGATCTGATC 59.999 57.143 9.18 9.18 44.92 2.92
3042 3250 1.220477 GTCCTTCAGGAGCAGGAGC 59.780 63.158 0.00 0.00 46.49 4.70
3088 3296 2.747446 GTCCCGTATTCACACAAGCATT 59.253 45.455 0.00 0.00 0.00 3.56
3346 3579 8.961294 TTTTACTATACCGGCAGCTTAATTTA 57.039 30.769 0.00 0.00 0.00 1.40
3400 3634 4.366267 ACCTCTCTGGGACAAAGTATGAT 58.634 43.478 0.00 0.00 38.70 2.45
3401 3635 3.791320 ACCTCTCTGGGACAAAGTATGA 58.209 45.455 0.00 0.00 38.70 2.15
3421 3655 3.310501 ACAAAGTTTATATGCGCGGGTAC 59.689 43.478 8.83 0.00 0.00 3.34
3422 3656 3.533547 ACAAAGTTTATATGCGCGGGTA 58.466 40.909 8.83 0.00 0.00 3.69
3423 3657 2.353579 GACAAAGTTTATATGCGCGGGT 59.646 45.455 8.83 0.00 0.00 5.28
3424 3658 2.598907 CGACAAAGTTTATATGCGCGGG 60.599 50.000 8.83 0.00 0.00 6.13
3425 3659 2.283086 TCGACAAAGTTTATATGCGCGG 59.717 45.455 8.83 0.00 0.00 6.46
3426 3660 3.000078 ACTCGACAAAGTTTATATGCGCG 60.000 43.478 0.00 0.00 0.00 6.86
3427 3661 4.516092 ACTCGACAAAGTTTATATGCGC 57.484 40.909 0.00 0.00 0.00 6.09
3428 3662 5.854157 ACAACTCGACAAAGTTTATATGCG 58.146 37.500 0.00 0.00 37.38 4.73
3452 3686 8.855110 TGTCCAACACACAACTTTAATCATTAT 58.145 29.630 0.00 0.00 0.00 1.28
3453 3687 8.226819 TGTCCAACACACAACTTTAATCATTA 57.773 30.769 0.00 0.00 0.00 1.90
3454 3688 7.106439 TGTCCAACACACAACTTTAATCATT 57.894 32.000 0.00 0.00 0.00 2.57
3455 3689 6.707440 TGTCCAACACACAACTTTAATCAT 57.293 33.333 0.00 0.00 0.00 2.45
3467 3701 5.813672 TACTTTGAAGTAGTGTCCAACACAC 59.186 40.000 12.34 8.33 46.30 3.82
3468 3702 5.979993 TACTTTGAAGTAGTGTCCAACACA 58.020 37.500 12.34 0.00 44.39 3.72
3481 3715 9.586435 CCAAAAGAAAAACATCTACTTTGAAGT 57.414 29.630 1.60 1.60 42.91 3.01
3482 3716 9.034544 CCCAAAAGAAAAACATCTACTTTGAAG 57.965 33.333 0.00 0.00 32.58 3.02
3483 3717 8.754080 TCCCAAAAGAAAAACATCTACTTTGAA 58.246 29.630 0.00 0.00 32.58 2.69
3484 3718 8.299990 TCCCAAAAGAAAAACATCTACTTTGA 57.700 30.769 0.00 0.00 32.58 2.69
3485 3719 8.940768 TTCCCAAAAGAAAAACATCTACTTTG 57.059 30.769 0.00 0.00 31.48 2.77
3486 3720 9.952030 TTTTCCCAAAAGAAAAACATCTACTTT 57.048 25.926 0.00 0.00 41.52 2.66
3491 3725 9.460019 TTGAATTTTCCCAAAAGAAAAACATCT 57.540 25.926 3.79 0.00 45.94 2.90
3500 3734 9.384764 ACGTTTATTTTGAATTTTCCCAAAAGA 57.615 25.926 8.27 2.42 42.98 2.52
3501 3735 9.995957 AACGTTTATTTTGAATTTTCCCAAAAG 57.004 25.926 0.00 0.00 42.98 2.27
3505 3739 9.262358 CCTAAACGTTTATTTTGAATTTTCCCA 57.738 29.630 20.39 0.00 0.00 4.37
3506 3740 8.225107 GCCTAAACGTTTATTTTGAATTTTCCC 58.775 33.333 20.39 0.00 0.00 3.97
3507 3741 8.225107 GGCCTAAACGTTTATTTTGAATTTTCC 58.775 33.333 20.39 5.56 0.00 3.13
3508 3742 8.984764 AGGCCTAAACGTTTATTTTGAATTTTC 58.015 29.630 20.39 2.23 0.00 2.29
3509 3743 8.896320 AGGCCTAAACGTTTATTTTGAATTTT 57.104 26.923 20.39 0.00 0.00 1.82
3510 3744 8.364894 AGAGGCCTAAACGTTTATTTTGAATTT 58.635 29.630 20.39 1.40 0.00 1.82
3511 3745 7.892609 AGAGGCCTAAACGTTTATTTTGAATT 58.107 30.769 20.39 2.73 0.00 2.17
3512 3746 7.462571 AGAGGCCTAAACGTTTATTTTGAAT 57.537 32.000 20.39 4.45 0.00 2.57
3513 3747 6.887626 AGAGGCCTAAACGTTTATTTTGAA 57.112 33.333 20.39 0.00 0.00 2.69
3514 3748 6.887626 AAGAGGCCTAAACGTTTATTTTGA 57.112 33.333 20.39 0.00 0.00 2.69
3515 3749 7.142680 TCAAAGAGGCCTAAACGTTTATTTTG 58.857 34.615 20.39 19.49 0.00 2.44
3516 3750 7.279750 TCAAAGAGGCCTAAACGTTTATTTT 57.720 32.000 20.39 11.32 0.00 1.82
3517 3751 6.887626 TCAAAGAGGCCTAAACGTTTATTT 57.112 33.333 20.39 13.68 0.00 1.40
3518 3752 7.175990 TGAATCAAAGAGGCCTAAACGTTTATT 59.824 33.333 20.39 8.61 0.00 1.40
3519 3753 6.657541 TGAATCAAAGAGGCCTAAACGTTTAT 59.342 34.615 20.39 6.40 0.00 1.40
3520 3754 5.998981 TGAATCAAAGAGGCCTAAACGTTTA 59.001 36.000 19.12 19.12 0.00 2.01
3521 3755 4.825085 TGAATCAAAGAGGCCTAAACGTTT 59.175 37.500 18.90 18.90 0.00 3.60
3522 3756 4.215613 GTGAATCAAAGAGGCCTAAACGTT 59.784 41.667 4.42 0.00 0.00 3.99
3523 3757 3.751698 GTGAATCAAAGAGGCCTAAACGT 59.248 43.478 4.42 0.00 0.00 3.99
3524 3758 3.751175 TGTGAATCAAAGAGGCCTAAACG 59.249 43.478 4.42 0.00 0.00 3.60
3525 3759 5.415701 TGATGTGAATCAAAGAGGCCTAAAC 59.584 40.000 4.42 0.00 0.00 2.01
3526 3760 5.569355 TGATGTGAATCAAAGAGGCCTAAA 58.431 37.500 4.42 0.00 0.00 1.85
3527 3761 5.178096 TGATGTGAATCAAAGAGGCCTAA 57.822 39.130 4.42 0.00 0.00 2.69
3528 3762 4.842531 TGATGTGAATCAAAGAGGCCTA 57.157 40.909 4.42 0.00 0.00 3.93
3529 3763 3.726557 TGATGTGAATCAAAGAGGCCT 57.273 42.857 3.86 3.86 0.00 5.19
3530 3764 4.643784 AGAATGATGTGAATCAAAGAGGCC 59.356 41.667 0.00 0.00 33.83 5.19
3531 3765 5.831702 AGAATGATGTGAATCAAAGAGGC 57.168 39.130 0.00 0.00 33.83 4.70
3585 3819 9.927668 CTCCAATCCTTTGTTTTTATACACAAT 57.072 29.630 0.00 0.00 32.96 2.71
3586 3820 8.364142 CCTCCAATCCTTTGTTTTTATACACAA 58.636 33.333 0.00 0.00 0.00 3.33
3587 3821 7.726291 TCCTCCAATCCTTTGTTTTTATACACA 59.274 33.333 0.00 0.00 0.00 3.72
3588 3822 8.117813 TCCTCCAATCCTTTGTTTTTATACAC 57.882 34.615 0.00 0.00 0.00 2.90
3589 3823 8.893563 ATCCTCCAATCCTTTGTTTTTATACA 57.106 30.769 0.00 0.00 0.00 2.29
3602 3836 9.827198 TGCAATTTATTTATATCCTCCAATCCT 57.173 29.630 0.00 0.00 0.00 3.24
3605 3839 9.933723 GCTTGCAATTTATTTATATCCTCCAAT 57.066 29.630 0.00 0.00 0.00 3.16
3606 3840 9.146586 AGCTTGCAATTTATTTATATCCTCCAA 57.853 29.630 0.00 0.00 0.00 3.53
3607 3841 8.710749 AGCTTGCAATTTATTTATATCCTCCA 57.289 30.769 0.00 0.00 0.00 3.86
3608 3842 9.415544 CAAGCTTGCAATTTATTTATATCCTCC 57.584 33.333 14.65 0.00 0.00 4.30
3609 3843 9.415544 CCAAGCTTGCAATTTATTTATATCCTC 57.584 33.333 21.43 0.00 0.00 3.71
3610 3844 8.370182 CCCAAGCTTGCAATTTATTTATATCCT 58.630 33.333 21.43 0.00 0.00 3.24
3611 3845 8.150296 ACCCAAGCTTGCAATTTATTTATATCC 58.850 33.333 21.43 0.00 0.00 2.59
3612 3846 8.981647 CACCCAAGCTTGCAATTTATTTATATC 58.018 33.333 21.43 0.00 0.00 1.63
3613 3847 8.485392 ACACCCAAGCTTGCAATTTATTTATAT 58.515 29.630 21.43 0.00 0.00 0.86
3614 3848 7.846066 ACACCCAAGCTTGCAATTTATTTATA 58.154 30.769 21.43 0.00 0.00 0.98
3615 3849 6.710278 ACACCCAAGCTTGCAATTTATTTAT 58.290 32.000 21.43 0.00 0.00 1.40
3616 3850 6.107901 ACACCCAAGCTTGCAATTTATTTA 57.892 33.333 21.43 0.00 0.00 1.40
3617 3851 4.971939 ACACCCAAGCTTGCAATTTATTT 58.028 34.783 21.43 0.00 0.00 1.40
3618 3852 4.622260 ACACCCAAGCTTGCAATTTATT 57.378 36.364 21.43 0.00 0.00 1.40
3619 3853 4.622260 AACACCCAAGCTTGCAATTTAT 57.378 36.364 21.43 0.52 0.00 1.40
3620 3854 4.376146 GAAACACCCAAGCTTGCAATTTA 58.624 39.130 21.43 0.00 0.00 1.40
3621 3855 3.205338 GAAACACCCAAGCTTGCAATTT 58.795 40.909 21.43 16.34 0.00 1.82
3622 3856 2.802774 CGAAACACCCAAGCTTGCAATT 60.803 45.455 21.43 10.38 0.00 2.32
3623 3857 1.269726 CGAAACACCCAAGCTTGCAAT 60.270 47.619 21.43 5.23 0.00 3.56
3624 3858 0.102120 CGAAACACCCAAGCTTGCAA 59.898 50.000 21.43 0.00 0.00 4.08
3625 3859 1.034838 ACGAAACACCCAAGCTTGCA 61.035 50.000 21.43 0.00 0.00 4.08
3626 3860 0.102300 AACGAAACACCCAAGCTTGC 59.898 50.000 21.43 4.46 0.00 4.01
3627 3861 1.403679 TGAACGAAACACCCAAGCTTG 59.596 47.619 19.93 19.93 0.00 4.01
3628 3862 1.404035 GTGAACGAAACACCCAAGCTT 59.596 47.619 0.00 0.00 32.84 3.74
3629 3863 1.021968 GTGAACGAAACACCCAAGCT 58.978 50.000 0.00 0.00 32.84 3.74
3630 3864 0.736053 TGTGAACGAAACACCCAAGC 59.264 50.000 0.00 0.00 37.45 4.01
3631 3865 1.333619 CCTGTGAACGAAACACCCAAG 59.666 52.381 0.00 0.00 37.45 3.61
3632 3866 1.065345 TCCTGTGAACGAAACACCCAA 60.065 47.619 0.00 0.00 37.45 4.12
3633 3867 0.542333 TCCTGTGAACGAAACACCCA 59.458 50.000 0.00 0.00 37.45 4.51
3634 3868 1.670791 TTCCTGTGAACGAAACACCC 58.329 50.000 0.00 0.00 37.45 4.61
3635 3869 4.312443 TCTATTCCTGTGAACGAAACACC 58.688 43.478 0.00 0.00 37.45 4.16
3636 3870 5.917541 TTCTATTCCTGTGAACGAAACAC 57.082 39.130 0.00 0.00 38.55 3.32
3637 3871 6.928979 TTTTCTATTCCTGTGAACGAAACA 57.071 33.333 0.00 0.00 35.09 2.83
3638 3872 7.190871 TGTTTTTCTATTCCTGTGAACGAAAC 58.809 34.615 0.00 0.00 35.09 2.78
3639 3873 7.323049 TGTTTTTCTATTCCTGTGAACGAAA 57.677 32.000 0.00 0.00 34.27 3.46
3640 3874 6.928979 TGTTTTTCTATTCCTGTGAACGAA 57.071 33.333 0.00 0.00 32.13 3.85
3641 3875 6.928979 TTGTTTTTCTATTCCTGTGAACGA 57.071 33.333 0.00 0.00 32.13 3.85
3642 3876 7.979115 TTTTGTTTTTCTATTCCTGTGAACG 57.021 32.000 0.00 0.00 32.13 3.95
3643 3877 8.817100 CCTTTTTGTTTTTCTATTCCTGTGAAC 58.183 33.333 0.00 0.00 32.13 3.18
3644 3878 8.536175 ACCTTTTTGTTTTTCTATTCCTGTGAA 58.464 29.630 0.00 0.00 34.33 3.18
3645 3879 8.073467 ACCTTTTTGTTTTTCTATTCCTGTGA 57.927 30.769 0.00 0.00 0.00 3.58
3646 3880 7.978975 TGACCTTTTTGTTTTTCTATTCCTGTG 59.021 33.333 0.00 0.00 0.00 3.66
3647 3881 8.073467 TGACCTTTTTGTTTTTCTATTCCTGT 57.927 30.769 0.00 0.00 0.00 4.00
3661 3895 9.762381 TGACCCTATTTATTATGACCTTTTTGT 57.238 29.630 0.00 0.00 0.00 2.83
3681 3915 9.108284 CTTGTTGTTTAATTTTGATTTGACCCT 57.892 29.630 0.00 0.00 0.00 4.34
3682 3916 9.103861 TCTTGTTGTTTAATTTTGATTTGACCC 57.896 29.630 0.00 0.00 0.00 4.46
3689 3923 9.533253 CACCTTCTCTTGTTGTTTAATTTTGAT 57.467 29.630 0.00 0.00 0.00 2.57
3690 3924 7.491048 GCACCTTCTCTTGTTGTTTAATTTTGA 59.509 33.333 0.00 0.00 0.00 2.69
3691 3925 7.277539 TGCACCTTCTCTTGTTGTTTAATTTTG 59.722 33.333 0.00 0.00 0.00 2.44
3692 3926 7.327214 TGCACCTTCTCTTGTTGTTTAATTTT 58.673 30.769 0.00 0.00 0.00 1.82
3693 3927 6.872920 TGCACCTTCTCTTGTTGTTTAATTT 58.127 32.000 0.00 0.00 0.00 1.82
3694 3928 6.463995 TGCACCTTCTCTTGTTGTTTAATT 57.536 33.333 0.00 0.00 0.00 1.40
3695 3929 6.463995 TTGCACCTTCTCTTGTTGTTTAAT 57.536 33.333 0.00 0.00 0.00 1.40
3696 3930 5.906113 TTGCACCTTCTCTTGTTGTTTAA 57.094 34.783 0.00 0.00 0.00 1.52
3697 3931 5.184096 TGTTTGCACCTTCTCTTGTTGTTTA 59.816 36.000 0.00 0.00 0.00 2.01
3698 3932 4.021544 TGTTTGCACCTTCTCTTGTTGTTT 60.022 37.500 0.00 0.00 0.00 2.83
3699 3933 3.509575 TGTTTGCACCTTCTCTTGTTGTT 59.490 39.130 0.00 0.00 0.00 2.83
3700 3934 3.088532 TGTTTGCACCTTCTCTTGTTGT 58.911 40.909 0.00 0.00 0.00 3.32
3701 3935 3.378112 TCTGTTTGCACCTTCTCTTGTTG 59.622 43.478 0.00 0.00 0.00 3.33
3702 3936 3.620488 TCTGTTTGCACCTTCTCTTGTT 58.380 40.909 0.00 0.00 0.00 2.83
3703 3937 3.209410 CTCTGTTTGCACCTTCTCTTGT 58.791 45.455 0.00 0.00 0.00 3.16
3704 3938 3.209410 ACTCTGTTTGCACCTTCTCTTG 58.791 45.455 0.00 0.00 0.00 3.02
3705 3939 3.567478 ACTCTGTTTGCACCTTCTCTT 57.433 42.857 0.00 0.00 0.00 2.85
3706 3940 3.118261 TCAACTCTGTTTGCACCTTCTCT 60.118 43.478 0.00 0.00 0.00 3.10
3707 3941 3.206150 TCAACTCTGTTTGCACCTTCTC 58.794 45.455 0.00 0.00 0.00 2.87
3708 3942 3.281727 TCAACTCTGTTTGCACCTTCT 57.718 42.857 0.00 0.00 0.00 2.85
3709 3943 4.036734 TGATTCAACTCTGTTTGCACCTTC 59.963 41.667 0.00 0.00 0.00 3.46
3710 3944 3.953612 TGATTCAACTCTGTTTGCACCTT 59.046 39.130 0.00 0.00 0.00 3.50
3711 3945 3.554934 TGATTCAACTCTGTTTGCACCT 58.445 40.909 0.00 0.00 0.00 4.00
3712 3946 3.565482 TCTGATTCAACTCTGTTTGCACC 59.435 43.478 0.00 0.00 0.00 5.01
3713 3947 4.818534 TCTGATTCAACTCTGTTTGCAC 57.181 40.909 0.00 0.00 0.00 4.57
3714 3948 5.334337 CGATTCTGATTCAACTCTGTTTGCA 60.334 40.000 1.09 0.00 0.00 4.08
3715 3949 5.084722 CGATTCTGATTCAACTCTGTTTGC 58.915 41.667 1.09 0.00 0.00 3.68
3716 3950 6.471976 TCGATTCTGATTCAACTCTGTTTG 57.528 37.500 1.09 0.00 0.00 2.93
3717 3951 6.073003 GGTTCGATTCTGATTCAACTCTGTTT 60.073 38.462 0.00 0.00 0.00 2.83
3718 3952 5.409826 GGTTCGATTCTGATTCAACTCTGTT 59.590 40.000 0.00 0.00 0.00 3.16
3719 3953 4.932200 GGTTCGATTCTGATTCAACTCTGT 59.068 41.667 0.00 0.00 0.00 3.41
3720 3954 4.931601 TGGTTCGATTCTGATTCAACTCTG 59.068 41.667 0.00 0.00 0.00 3.35
3721 3955 4.932200 GTGGTTCGATTCTGATTCAACTCT 59.068 41.667 0.00 0.00 0.00 3.24
3722 3956 4.690748 TGTGGTTCGATTCTGATTCAACTC 59.309 41.667 0.00 3.80 0.00 3.01
3723 3957 4.641396 TGTGGTTCGATTCTGATTCAACT 58.359 39.130 0.00 0.00 0.00 3.16
3724 3958 5.122239 TCATGTGGTTCGATTCTGATTCAAC 59.878 40.000 0.00 4.29 0.00 3.18
3725 3959 5.244755 TCATGTGGTTCGATTCTGATTCAA 58.755 37.500 0.00 0.00 0.00 2.69
3726 3960 4.831107 TCATGTGGTTCGATTCTGATTCA 58.169 39.130 0.00 0.00 0.00 2.57
3727 3961 5.801350 TTCATGTGGTTCGATTCTGATTC 57.199 39.130 0.00 0.00 0.00 2.52
3728 3962 6.573664 TTTTCATGTGGTTCGATTCTGATT 57.426 33.333 0.00 0.00 0.00 2.57
3729 3963 6.764308 ATTTTCATGTGGTTCGATTCTGAT 57.236 33.333 0.00 0.00 0.00 2.90
3730 3964 6.652900 TGTATTTTCATGTGGTTCGATTCTGA 59.347 34.615 0.00 0.00 0.00 3.27
3731 3965 6.841119 TGTATTTTCATGTGGTTCGATTCTG 58.159 36.000 0.00 0.00 0.00 3.02
3732 3966 7.630242 ATGTATTTTCATGTGGTTCGATTCT 57.370 32.000 0.00 0.00 0.00 2.40
3733 3967 9.950680 ATTATGTATTTTCATGTGGTTCGATTC 57.049 29.630 0.00 0.00 0.00 2.52
3737 3971 9.169468 GCTAATTATGTATTTTCATGTGGTTCG 57.831 33.333 0.00 0.00 0.00 3.95
3740 3974 9.970395 CATGCTAATTATGTATTTTCATGTGGT 57.030 29.630 0.00 0.00 34.05 4.16
3741 3975 9.970395 ACATGCTAATTATGTATTTTCATGTGG 57.030 29.630 0.00 0.00 41.34 4.17
3764 3998 7.071069 TGAGATCTTAGTGCCATGATAACAT 57.929 36.000 0.00 0.00 37.19 2.71
3765 3999 6.098838 ACTGAGATCTTAGTGCCATGATAACA 59.901 38.462 18.63 0.00 0.00 2.41
3766 4000 6.520272 ACTGAGATCTTAGTGCCATGATAAC 58.480 40.000 18.63 0.00 0.00 1.89
3767 4001 6.552725 AGACTGAGATCTTAGTGCCATGATAA 59.447 38.462 23.63 0.00 28.96 1.75
3768 4002 6.073981 AGACTGAGATCTTAGTGCCATGATA 58.926 40.000 23.63 0.00 28.96 2.15
3769 4003 4.900652 AGACTGAGATCTTAGTGCCATGAT 59.099 41.667 23.63 0.00 28.96 2.45
3770 4004 4.285020 AGACTGAGATCTTAGTGCCATGA 58.715 43.478 23.63 0.00 28.96 3.07
3771 4005 4.619973 GAGACTGAGATCTTAGTGCCATG 58.380 47.826 23.63 0.00 28.96 3.66
3772 4006 3.317711 CGAGACTGAGATCTTAGTGCCAT 59.682 47.826 23.63 7.74 28.96 4.40
3773 4007 2.685388 CGAGACTGAGATCTTAGTGCCA 59.315 50.000 23.63 2.15 28.96 4.92
3774 4008 2.685897 ACGAGACTGAGATCTTAGTGCC 59.314 50.000 23.63 13.58 28.96 5.01
3775 4009 4.364415 AACGAGACTGAGATCTTAGTGC 57.636 45.455 23.63 14.15 28.96 4.40
3776 4010 7.698628 TGAATAACGAGACTGAGATCTTAGTG 58.301 38.462 23.63 12.42 28.96 2.74
3777 4011 7.867305 TGAATAACGAGACTGAGATCTTAGT 57.133 36.000 19.31 19.31 31.68 2.24
3778 4012 7.744276 CGATGAATAACGAGACTGAGATCTTAG 59.256 40.741 12.74 12.74 0.00 2.18
3779 4013 7.226918 ACGATGAATAACGAGACTGAGATCTTA 59.773 37.037 0.00 0.00 0.00 2.10
3780 4014 6.038825 ACGATGAATAACGAGACTGAGATCTT 59.961 38.462 0.00 0.00 0.00 2.40
3781 4015 5.529430 ACGATGAATAACGAGACTGAGATCT 59.471 40.000 0.00 0.00 0.00 2.75
3782 4016 5.753744 ACGATGAATAACGAGACTGAGATC 58.246 41.667 0.00 0.00 0.00 2.75
3783 4017 5.759506 ACGATGAATAACGAGACTGAGAT 57.240 39.130 0.00 0.00 0.00 2.75
3784 4018 6.293462 CCATACGATGAATAACGAGACTGAGA 60.293 42.308 0.00 0.00 0.00 3.27
3785 4019 5.853810 CCATACGATGAATAACGAGACTGAG 59.146 44.000 0.00 0.00 0.00 3.35
3786 4020 5.529800 TCCATACGATGAATAACGAGACTGA 59.470 40.000 0.00 0.00 0.00 3.41
3787 4021 5.758924 TCCATACGATGAATAACGAGACTG 58.241 41.667 0.00 0.00 0.00 3.51
3788 4022 6.576662 ATCCATACGATGAATAACGAGACT 57.423 37.500 0.00 0.00 0.00 3.24
3789 4023 7.639162 AAATCCATACGATGAATAACGAGAC 57.361 36.000 0.00 0.00 0.00 3.36
3790 4024 9.752961 TTTAAATCCATACGATGAATAACGAGA 57.247 29.630 0.00 0.00 0.00 4.04
3797 4031 9.408648 ACCTCTTTTTAAATCCATACGATGAAT 57.591 29.630 0.00 0.00 0.00 2.57
3798 4032 8.801882 ACCTCTTTTTAAATCCATACGATGAA 57.198 30.769 0.00 0.00 0.00 2.57
3799 4033 8.265055 AGACCTCTTTTTAAATCCATACGATGA 58.735 33.333 0.00 0.00 0.00 2.92
3800 4034 8.438676 AGACCTCTTTTTAAATCCATACGATG 57.561 34.615 0.00 0.00 0.00 3.84
3802 4036 9.595823 CTTAGACCTCTTTTTAAATCCATACGA 57.404 33.333 0.00 0.00 0.00 3.43
3803 4037 9.379791 ACTTAGACCTCTTTTTAAATCCATACG 57.620 33.333 0.00 0.00 0.00 3.06
3813 4047 9.765795 CAGAGAGAAAACTTAGACCTCTTTTTA 57.234 33.333 0.00 0.00 34.67 1.52
3814 4048 8.487028 TCAGAGAGAAAACTTAGACCTCTTTTT 58.513 33.333 0.00 0.00 34.67 1.94
3815 4049 8.024145 TCAGAGAGAAAACTTAGACCTCTTTT 57.976 34.615 0.00 0.00 34.67 2.27
3816 4050 7.604657 TCAGAGAGAAAACTTAGACCTCTTT 57.395 36.000 0.00 0.00 34.67 2.52
3817 4051 7.604657 TTCAGAGAGAAAACTTAGACCTCTT 57.395 36.000 0.00 0.00 34.67 2.85
3818 4052 7.604657 TTTCAGAGAGAAAACTTAGACCTCT 57.395 36.000 0.00 0.00 43.00 3.69
3830 4064 6.992715 CCTTTGGTCTAAGTTTCAGAGAGAAA 59.007 38.462 0.00 0.00 43.71 2.52
3831 4065 6.326583 TCCTTTGGTCTAAGTTTCAGAGAGAA 59.673 38.462 0.00 0.00 0.00 2.87
3832 4066 5.839063 TCCTTTGGTCTAAGTTTCAGAGAGA 59.161 40.000 0.00 0.00 0.00 3.10
3833 4067 6.102897 TCCTTTGGTCTAAGTTTCAGAGAG 57.897 41.667 0.00 0.00 0.00 3.20
3834 4068 6.494666 TTCCTTTGGTCTAAGTTTCAGAGA 57.505 37.500 0.00 0.00 0.00 3.10
3835 4069 7.568199 TTTTCCTTTGGTCTAAGTTTCAGAG 57.432 36.000 0.00 0.00 0.00 3.35
3836 4070 8.533569 AATTTTCCTTTGGTCTAAGTTTCAGA 57.466 30.769 0.00 0.00 0.00 3.27
3837 4071 9.249457 GAAATTTTCCTTTGGTCTAAGTTTCAG 57.751 33.333 0.00 0.00 0.00 3.02
3838 4072 8.201464 GGAAATTTTCCTTTGGTCTAAGTTTCA 58.799 33.333 19.01 0.00 46.57 2.69
3839 4073 8.589335 GGAAATTTTCCTTTGGTCTAAGTTTC 57.411 34.615 19.01 0.00 46.57 2.78
3855 4089 8.607441 AAAAGGATGTAGCAAAGGAAATTTTC 57.393 30.769 0.24 0.24 0.00 2.29
3857 4091 9.710900 CTTAAAAGGATGTAGCAAAGGAAATTT 57.289 29.630 0.00 0.00 0.00 1.82
3876 4110 5.714806 TCCATCACCTTTAAGGCCTTAAAAG 59.285 40.000 37.59 34.65 42.39 2.27
3877 4111 5.646215 TCCATCACCTTTAAGGCCTTAAAA 58.354 37.500 37.59 28.10 42.39 1.52
3878 4112 5.014755 TCTCCATCACCTTTAAGGCCTTAAA 59.985 40.000 36.67 36.67 39.63 1.52
3879 4113 4.538490 TCTCCATCACCTTTAAGGCCTTAA 59.462 41.667 30.16 30.16 39.63 1.85
3880 4114 4.108570 TCTCCATCACCTTTAAGGCCTTA 58.891 43.478 21.68 21.68 39.63 2.69
3881 4115 2.919602 TCTCCATCACCTTTAAGGCCTT 59.080 45.455 24.18 24.18 39.63 4.35
3882 4116 2.562296 TCTCCATCACCTTTAAGGCCT 58.438 47.619 11.45 0.00 39.63 5.19
3883 4117 3.584733 ATCTCCATCACCTTTAAGGCC 57.415 47.619 11.45 0.00 39.63 5.19
3884 4118 4.949856 TGAAATCTCCATCACCTTTAAGGC 59.050 41.667 11.45 0.00 39.63 4.35
3885 4119 7.651027 AATGAAATCTCCATCACCTTTAAGG 57.349 36.000 9.81 9.81 42.49 2.69
3886 4120 9.933723 AAAAATGAAATCTCCATCACCTTTAAG 57.066 29.630 0.00 0.00 0.00 1.85
3887 4121 9.927668 GAAAAATGAAATCTCCATCACCTTTAA 57.072 29.630 0.00 0.00 0.00 1.52
3888 4122 9.087871 TGAAAAATGAAATCTCCATCACCTTTA 57.912 29.630 0.00 0.00 0.00 1.85
3889 4123 7.965718 TGAAAAATGAAATCTCCATCACCTTT 58.034 30.769 0.00 0.00 0.00 3.11
3890 4124 7.543359 TGAAAAATGAAATCTCCATCACCTT 57.457 32.000 0.00 0.00 0.00 3.50
3891 4125 7.729124 ATGAAAAATGAAATCTCCATCACCT 57.271 32.000 0.00 0.00 0.00 4.00
3892 4126 8.689972 AGTATGAAAAATGAAATCTCCATCACC 58.310 33.333 0.00 0.00 0.00 4.02
3893 4127 9.512435 CAGTATGAAAAATGAAATCTCCATCAC 57.488 33.333 0.00 0.00 39.69 3.06
3894 4128 9.246670 ACAGTATGAAAAATGAAATCTCCATCA 57.753 29.630 0.00 0.00 39.69 3.07
3895 4129 9.512435 CACAGTATGAAAAATGAAATCTCCATC 57.488 33.333 0.00 0.00 39.69 3.51
3896 4130 7.977853 GCACAGTATGAAAAATGAAATCTCCAT 59.022 33.333 0.00 0.00 39.69 3.41
3897 4131 7.315142 GCACAGTATGAAAAATGAAATCTCCA 58.685 34.615 0.00 0.00 39.69 3.86
3898 4132 6.753744 GGCACAGTATGAAAAATGAAATCTCC 59.246 38.462 0.00 0.00 39.69 3.71
3899 4133 7.315142 TGGCACAGTATGAAAAATGAAATCTC 58.685 34.615 0.00 0.00 39.69 2.75
3900 4134 7.230849 TGGCACAGTATGAAAAATGAAATCT 57.769 32.000 0.00 0.00 39.69 2.40
3918 4152 1.997311 ATAGCAGCTCCCTGGCACA 60.997 57.895 0.00 0.00 39.54 4.57
3919 4153 1.525535 CATAGCAGCTCCCTGGCAC 60.526 63.158 0.00 0.00 39.54 5.01
3920 4154 1.565390 AACATAGCAGCTCCCTGGCA 61.565 55.000 0.00 0.00 39.54 4.92
3921 4155 0.394899 AAACATAGCAGCTCCCTGGC 60.395 55.000 0.00 0.00 39.54 4.85
3922 4156 1.386533 CAAACATAGCAGCTCCCTGG 58.613 55.000 0.00 0.00 39.54 4.45
3923 4157 0.737219 GCAAACATAGCAGCTCCCTG 59.263 55.000 0.00 0.00 42.13 4.45
3924 4158 0.329261 TGCAAACATAGCAGCTCCCT 59.671 50.000 0.00 0.00 37.02 4.20
3925 4159 2.872408 TGCAAACATAGCAGCTCCC 58.128 52.632 0.00 0.00 37.02 4.30
3931 4165 1.619654 AAGCACCTGCAAACATAGCA 58.380 45.000 0.00 0.00 45.16 3.49
3932 4166 4.376340 AATAAGCACCTGCAAACATAGC 57.624 40.909 0.00 0.00 45.16 2.97
3974 4208 2.290197 GGCATGCCCCTCAATTCAAAAA 60.290 45.455 27.24 0.00 0.00 1.94
3975 4209 1.278699 GGCATGCCCCTCAATTCAAAA 59.721 47.619 27.24 0.00 0.00 2.44
3976 4210 0.903942 GGCATGCCCCTCAATTCAAA 59.096 50.000 27.24 0.00 0.00 2.69
3977 4211 2.594342 GGCATGCCCCTCAATTCAA 58.406 52.632 27.24 0.00 0.00 2.69
3978 4212 4.360643 GGCATGCCCCTCAATTCA 57.639 55.556 27.24 0.00 0.00 2.57
3988 4222 1.402107 AATGAAATCGGGGGCATGCC 61.402 55.000 29.47 29.47 0.00 4.40
3989 4223 0.465287 AAATGAAATCGGGGGCATGC 59.535 50.000 9.90 9.90 0.00 4.06
3990 4224 1.755959 TGAAATGAAATCGGGGGCATG 59.244 47.619 0.00 0.00 0.00 4.06
3991 4225 2.157640 TGAAATGAAATCGGGGGCAT 57.842 45.000 0.00 0.00 0.00 4.40
3992 4226 2.157640 ATGAAATGAAATCGGGGGCA 57.842 45.000 0.00 0.00 0.00 5.36
3993 4227 2.825205 CAATGAAATGAAATCGGGGGC 58.175 47.619 0.00 0.00 0.00 5.80
3994 4228 2.168106 TGCAATGAAATGAAATCGGGGG 59.832 45.455 0.00 0.00 0.00 5.40
3995 4229 3.523606 TGCAATGAAATGAAATCGGGG 57.476 42.857 0.00 0.00 0.00 5.73
4010 4244 7.718753 TGTTTTATTGGTTTCCTTTCATGCAAT 59.281 29.630 0.00 0.00 0.00 3.56
4011 4245 7.050377 TGTTTTATTGGTTTCCTTTCATGCAA 58.950 30.769 0.00 0.00 0.00 4.08
4012 4246 6.586344 TGTTTTATTGGTTTCCTTTCATGCA 58.414 32.000 0.00 0.00 0.00 3.96
4013 4247 6.928492 TCTGTTTTATTGGTTTCCTTTCATGC 59.072 34.615 0.00 0.00 0.00 4.06
4014 4248 9.143631 GATCTGTTTTATTGGTTTCCTTTCATG 57.856 33.333 0.00 0.00 0.00 3.07
4015 4249 8.869109 TGATCTGTTTTATTGGTTTCCTTTCAT 58.131 29.630 0.00 0.00 0.00 2.57
4016 4250 8.243961 TGATCTGTTTTATTGGTTTCCTTTCA 57.756 30.769 0.00 0.00 0.00 2.69
4017 4251 9.196552 CTTGATCTGTTTTATTGGTTTCCTTTC 57.803 33.333 0.00 0.00 0.00 2.62
4018 4252 8.704668 ACTTGATCTGTTTTATTGGTTTCCTTT 58.295 29.630 0.00 0.00 0.00 3.11
4019 4253 8.250143 ACTTGATCTGTTTTATTGGTTTCCTT 57.750 30.769 0.00 0.00 0.00 3.36
4020 4254 7.839680 ACTTGATCTGTTTTATTGGTTTCCT 57.160 32.000 0.00 0.00 0.00 3.36


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.