Multiple sequence alignment - TraesCS4D01G223300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G223300 chr4D 100.000 7257 0 0 1376 8632 380254940 380247684 0.000000e+00 13402
1 TraesCS4D01G223300 chr4D 100.000 1153 0 0 1 1153 380256315 380255163 0.000000e+00 2130
2 TraesCS4D01G223300 chr4D 94.860 214 11 0 8419 8632 39368064 39368277 1.390000e-87 335
3 TraesCS4D01G223300 chr4D 93.868 212 13 0 8421 8632 345356555 345356344 3.890000e-83 320
4 TraesCS4D01G223300 chr4D 96.667 90 3 0 4039 4128 371926811 371926900 5.400000e-32 150
5 TraesCS4D01G223300 chr4D 92.000 100 8 0 4038 4137 124628858 124628759 3.250000e-29 141
6 TraesCS4D01G223300 chr4A 95.921 4266 99 22 4123 8338 83756348 83760588 0.000000e+00 6844
7 TraesCS4D01G223300 chr4A 95.762 1628 59 7 1377 2996 83753723 83755348 0.000000e+00 2615
8 TraesCS4D01G223300 chr4A 97.828 1013 20 2 3032 4043 83755340 83756351 0.000000e+00 1748
9 TraesCS4D01G223300 chr4A 95.168 745 20 8 418 1153 83752975 83753712 0.000000e+00 1162
10 TraesCS4D01G223300 chr4A 88.947 190 13 8 130 318 83751606 83751788 2.420000e-55 228
11 TraesCS4D01G223300 chr4A 96.591 88 3 0 4042 4129 556768039 556767952 6.980000e-31 147
12 TraesCS4D01G223300 chr4B 93.823 2930 106 28 5207 8109 467273750 467270869 0.000000e+00 4338
13 TraesCS4D01G223300 chr4B 95.268 1416 54 7 1377 2786 467278017 467276609 0.000000e+00 2231
14 TraesCS4D01G223300 chr4B 97.433 857 19 1 3190 4043 467275985 467275129 0.000000e+00 1458
15 TraesCS4D01G223300 chr4B 97.089 790 20 3 4426 5214 467274745 467273958 0.000000e+00 1328
16 TraesCS4D01G223300 chr4B 96.212 660 11 6 502 1153 467278681 467278028 0.000000e+00 1068
17 TraesCS4D01G223300 chr4B 93.541 418 20 4 2784 3194 467276523 467276106 4.430000e-172 616
18 TraesCS4D01G223300 chr4B 82.745 510 57 16 3 504 467279927 467279441 8.010000e-115 425
19 TraesCS4D01G223300 chr4B 95.890 146 5 1 4123 4268 467275132 467274988 1.450000e-57 235
20 TraesCS4D01G223300 chr4B 93.893 131 7 1 4265 4394 467274876 467274746 6.840000e-46 196
21 TraesCS4D01G223300 chr3B 84.871 542 59 13 2895 3426 810109305 810109833 7.680000e-145 525
22 TraesCS4D01G223300 chr3B 82.004 489 47 16 2902 3384 809861459 809861006 2.270000e-100 377
23 TraesCS4D01G223300 chr3B 81.882 287 29 11 867 1153 809861909 809861646 4.060000e-53 220
24 TraesCS4D01G223300 chr2D 95.283 212 10 0 8421 8632 646882170 646882381 3.860000e-88 337
25 TraesCS4D01G223300 chr2D 95.283 212 10 0 8421 8632 646927312 646927523 3.860000e-88 337
26 TraesCS4D01G223300 chr2D 94.811 212 11 0 8421 8632 646798394 646798605 1.800000e-86 331
27 TraesCS4D01G223300 chr2D 94.340 212 12 0 8421 8632 646959768 646959979 8.360000e-85 326
28 TraesCS4D01G223300 chr2D 96.703 91 3 0 4036 4126 53145721 53145811 1.500000e-32 152
29 TraesCS4D01G223300 chr2D 92.929 99 7 0 4036 4134 619321003 619321101 2.510000e-30 145
30 TraesCS4D01G223300 chr2D 92.079 101 7 1 4029 4129 378043082 378043181 3.250000e-29 141
31 TraesCS4D01G223300 chr2D 96.429 84 3 0 7311 7394 628285234 628285317 1.170000e-28 139
32 TraesCS4D01G223300 chr1D 93.925 214 13 0 8419 8632 451191826 451192039 3.010000e-84 324
33 TraesCS4D01G223300 chr1D 94.845 97 4 1 4042 4138 337065273 337065178 5.400000e-32 150
34 TraesCS4D01G223300 chr1D 96.429 84 3 0 7311 7394 254489266 254489349 1.170000e-28 139
35 TraesCS4D01G223300 chr1D 95.238 84 4 0 7311 7394 244401731 244401814 5.440000e-27 134
36 TraesCS4D01G223300 chr1B 93.182 220 15 0 8413 8632 61491026 61491245 3.010000e-84 324
37 TraesCS4D01G223300 chr5B 93.427 213 14 0 8420 8632 54114826 54115038 5.030000e-82 316
38 TraesCS4D01G223300 chr3D 82.955 352 43 7 3084 3426 603712268 603711925 1.410000e-77 302
39 TraesCS4D01G223300 chr3D 87.417 151 13 6 2895 3041 603712413 603712265 1.490000e-37 169
40 TraesCS4D01G223300 chr5A 81.818 352 43 9 3084 3426 31447263 31446924 8.540000e-70 276
41 TraesCS4D01G223300 chr5A 86.755 151 14 6 2895 3041 31447408 31447260 6.930000e-36 163
42 TraesCS4D01G223300 chr2A 76.963 382 68 15 3221 3599 725257279 725256915 5.280000e-47 200
43 TraesCS4D01G223300 chr5D 96.739 92 2 1 4038 4129 500118292 500118382 1.500000e-32 152
44 TraesCS4D01G223300 chr5D 96.429 84 3 0 7311 7394 6208249 6208166 1.170000e-28 139
45 TraesCS4D01G223300 chr6D 93.750 96 5 1 4032 4126 316232286 316232381 9.030000e-30 143
46 TraesCS4D01G223300 chr6D 96.429 84 3 0 7311 7394 431399595 431399678 1.170000e-28 139
47 TraesCS4D01G223300 chr6D 73.926 349 66 19 2534 2865 405676379 405676039 5.470000e-22 117
48 TraesCS4D01G223300 chrUn 96.429 84 3 0 7311 7394 317473625 317473542 1.170000e-28 139
49 TraesCS4D01G223300 chrUn 96.429 84 3 0 7311 7394 404957799 404957882 1.170000e-28 139


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G223300 chr4D 380247684 380256315 8631 True 7766.000000 13402 100.000000 1 8632 2 chr4D.!!$R3 8631
1 TraesCS4D01G223300 chr4A 83751606 83760588 8982 False 2519.400000 6844 94.725200 130 8338 5 chr4A.!!$F1 8208
2 TraesCS4D01G223300 chr4B 467270869 467279927 9058 True 1321.666667 4338 93.988222 3 8109 9 chr4B.!!$R1 8106
3 TraesCS4D01G223300 chr3B 810109305 810109833 528 False 525.000000 525 84.871000 2895 3426 1 chr3B.!!$F1 531
4 TraesCS4D01G223300 chr3B 809861006 809861909 903 True 298.500000 377 81.943000 867 3384 2 chr3B.!!$R1 2517

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
193 194 0.034186 TCAAGCTGGGCTGGGTTATG 60.034 55.000 0.0 0.0 39.62 1.90 F
194 195 0.034186 CAAGCTGGGCTGGGTTATGA 60.034 55.000 0.0 0.0 39.62 2.15 F
634 2510 0.247736 CACCTACCAGCCTCACACTC 59.752 60.000 0.0 0.0 0.00 3.51 F
665 2541 0.597637 CCCCGTCGAAATCCAGATCG 60.598 60.000 0.0 0.0 40.31 3.69 F
2129 4015 0.961019 TGCAGATCAAAAGGTGTGCC 59.039 50.000 0.0 0.0 0.00 5.01 F
2689 4575 0.893270 TGTTTGGATGAAGTGGGCGG 60.893 55.000 0.0 0.0 0.00 6.13 F
4056 6174 1.002069 TTAGTACTCCCTCCGTCCCA 58.998 55.000 0.0 0.0 0.00 4.37 F
4057 6175 1.229131 TAGTACTCCCTCCGTCCCAT 58.771 55.000 0.0 0.0 0.00 4.00 F
4058 6176 1.229131 AGTACTCCCTCCGTCCCATA 58.771 55.000 0.0 0.0 0.00 2.74 F
4059 6177 1.572415 AGTACTCCCTCCGTCCCATAA 59.428 52.381 0.0 0.0 0.00 1.90 F
4669 6903 1.668151 GGTGTGCGGTGGAGTTCTC 60.668 63.158 0.0 0.0 0.00 2.87 F
6387 8851 3.005791 GCTTGTGTTGCAGTCCCTAAATT 59.994 43.478 0.0 0.0 0.00 1.82 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1840 3724 1.293498 GCGTTGAGCTGAGGGAAGA 59.707 57.895 0.00 0.0 44.04 2.87 R
2088 3974 1.352083 AGGAGTAGCCAGAGCAACAA 58.648 50.000 0.00 0.0 43.56 2.83 R
2129 4015 3.443045 AGCTTGCGGGCCATTTCG 61.443 61.111 4.39 0.0 0.00 3.46 R
2498 4384 4.260670 CGTACAACTTATACAACATGCGC 58.739 43.478 0.00 0.0 0.00 6.09 R
4105 6223 0.042131 ACTCCCTCCGTCCCATAACA 59.958 55.000 0.00 0.0 0.00 2.41 R
4109 6227 0.338814 AACTACTCCCTCCGTCCCAT 59.661 55.000 0.00 0.0 0.00 4.00 R
5674 8124 0.183492 AGGAGCAAACCTGTGAAGCA 59.817 50.000 0.00 0.0 39.01 3.91 R
5758 8208 5.880332 TCAGTACCATATGTTCCAAAAGAGC 59.120 40.000 1.24 0.0 0.00 4.09 R
6349 8813 1.478105 CAAGCTACAAAAGGATGGGCC 59.522 52.381 0.00 0.0 0.00 5.80 R
6387 8851 9.619316 GTTACAAATGTGAACAGCAATACAATA 57.381 29.630 0.00 0.0 0.00 1.90 R
6834 9298 6.985188 TCAGCACAGAAGTAAATATGAACC 57.015 37.500 0.00 0.0 0.00 3.62 R
8556 11065 0.036952 CACCAGGTAGTGTGGCTCTG 60.037 60.000 0.00 0.0 38.83 3.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 0.534877 ACCATTGAACAGAGCGTGCA 60.535 50.000 0.00 0.00 0.00 4.57
51 52 1.813753 GCTGGCGGTCGATTTGCTA 60.814 57.895 6.48 0.41 0.00 3.49
61 62 1.933181 TCGATTTGCTAATGTGCCTCG 59.067 47.619 0.00 0.00 33.11 4.63
68 69 1.586422 CTAATGTGCCTCGTGATGGG 58.414 55.000 0.00 0.00 0.00 4.00
69 70 0.908910 TAATGTGCCTCGTGATGGGT 59.091 50.000 0.00 0.00 0.00 4.51
72 73 2.678580 TGCCTCGTGATGGGTCGA 60.679 61.111 0.00 0.00 34.88 4.20
73 74 2.058001 TGCCTCGTGATGGGTCGAT 61.058 57.895 0.00 0.00 35.57 3.59
79 80 1.611977 TCGTGATGGGTCGATCCATAC 59.388 52.381 29.98 23.43 46.67 2.39
82 83 2.104111 GTGATGGGTCGATCCATACCAA 59.896 50.000 29.98 13.29 46.67 3.67
90 91 1.506493 GATCCATACCAAGAGCTGCG 58.494 55.000 0.00 0.00 0.00 5.18
109 110 1.014352 GTAGGCGCCATAAACACCAG 58.986 55.000 31.54 0.00 0.00 4.00
112 113 2.339556 GCGCCATAAACACCAGCCA 61.340 57.895 0.00 0.00 0.00 4.75
114 115 1.512694 GCCATAAACACCAGCCAGC 59.487 57.895 0.00 0.00 0.00 4.85
115 116 1.250154 GCCATAAACACCAGCCAGCA 61.250 55.000 0.00 0.00 0.00 4.41
116 117 1.477553 CCATAAACACCAGCCAGCAT 58.522 50.000 0.00 0.00 0.00 3.79
124 125 1.203052 CACCAGCCAGCATTAAAGGTG 59.797 52.381 2.97 2.97 39.04 4.00
136 137 2.781681 TAAAGGTGCCAGTTAGGAGC 57.218 50.000 0.00 0.00 41.22 4.70
169 170 6.128282 ACTGTATTGTTCTTTTGCATAGGACG 60.128 38.462 0.00 0.00 0.00 4.79
170 171 5.935206 TGTATTGTTCTTTTGCATAGGACGA 59.065 36.000 0.00 0.00 0.00 4.20
177 178 5.000591 TCTTTTGCATAGGACGATGTTCAA 58.999 37.500 0.00 0.00 0.00 2.69
178 179 4.944962 TTTGCATAGGACGATGTTCAAG 57.055 40.909 0.00 0.00 0.00 3.02
179 180 2.279741 TGCATAGGACGATGTTCAAGC 58.720 47.619 0.00 0.00 0.00 4.01
180 181 2.093500 TGCATAGGACGATGTTCAAGCT 60.093 45.455 0.00 0.00 0.00 3.74
181 182 2.286294 GCATAGGACGATGTTCAAGCTG 59.714 50.000 0.00 0.00 0.00 4.24
182 183 2.672961 TAGGACGATGTTCAAGCTGG 57.327 50.000 0.00 0.00 0.00 4.85
183 184 0.036010 AGGACGATGTTCAAGCTGGG 60.036 55.000 0.00 0.00 0.00 4.45
184 185 1.648467 GGACGATGTTCAAGCTGGGC 61.648 60.000 0.00 0.00 0.00 5.36
185 186 0.674895 GACGATGTTCAAGCTGGGCT 60.675 55.000 0.00 0.00 42.56 5.19
186 187 0.957395 ACGATGTTCAAGCTGGGCTG 60.957 55.000 0.00 0.00 39.62 4.85
187 188 1.651240 CGATGTTCAAGCTGGGCTGG 61.651 60.000 0.00 0.00 39.62 4.85
188 189 1.304713 ATGTTCAAGCTGGGCTGGG 60.305 57.895 0.00 0.00 39.62 4.45
189 190 2.085343 ATGTTCAAGCTGGGCTGGGT 62.085 55.000 0.00 0.00 39.62 4.51
190 191 1.531602 GTTCAAGCTGGGCTGGGTT 60.532 57.895 0.00 0.00 39.62 4.11
191 192 0.251165 GTTCAAGCTGGGCTGGGTTA 60.251 55.000 0.00 0.00 39.62 2.85
192 193 0.704076 TTCAAGCTGGGCTGGGTTAT 59.296 50.000 0.00 0.00 39.62 1.89
193 194 0.034186 TCAAGCTGGGCTGGGTTATG 60.034 55.000 0.00 0.00 39.62 1.90
194 195 0.034186 CAAGCTGGGCTGGGTTATGA 60.034 55.000 0.00 0.00 39.62 2.15
230 248 3.700038 CGTAAGAGTCTATGACCCCAACT 59.300 47.826 0.00 0.00 43.02 3.16
264 282 4.949121 AGAGTCTATGACCCACCTACTTT 58.051 43.478 0.00 0.00 32.18 2.66
267 285 5.342866 AGTCTATGACCCACCTACTTTCTT 58.657 41.667 0.00 0.00 32.18 2.52
268 286 5.785940 AGTCTATGACCCACCTACTTTCTTT 59.214 40.000 0.00 0.00 32.18 2.52
269 287 6.070710 AGTCTATGACCCACCTACTTTCTTTC 60.071 42.308 0.00 0.00 32.18 2.62
295 313 9.125026 CTTTATAAATGTAAGATGTTCTGGCCT 57.875 33.333 3.32 0.00 0.00 5.19
388 436 9.903682 GTCCATATCAAGATATCCAAAACATTG 57.096 33.333 0.00 0.00 31.98 2.82
437 1544 7.721399 ACATCTTAATTTGTGAACTGAAGGACT 59.279 33.333 0.00 0.00 0.00 3.85
472 1579 3.425227 CCGGAAAAATAAAACCGACCTCG 60.425 47.826 0.00 0.00 46.94 4.63
607 2483 2.278989 ACCGACACGACACGTTGG 60.279 61.111 0.00 0.00 42.79 3.77
632 2508 1.296715 CCACCTACCAGCCTCACAC 59.703 63.158 0.00 0.00 0.00 3.82
633 2509 1.194781 CCACCTACCAGCCTCACACT 61.195 60.000 0.00 0.00 0.00 3.55
634 2510 0.247736 CACCTACCAGCCTCACACTC 59.752 60.000 0.00 0.00 0.00 3.51
635 2511 0.905337 ACCTACCAGCCTCACACTCC 60.905 60.000 0.00 0.00 0.00 3.85
636 2512 0.616111 CCTACCAGCCTCACACTCCT 60.616 60.000 0.00 0.00 0.00 3.69
643 2519 1.662438 GCCTCACACTCCTCTCCTCG 61.662 65.000 0.00 0.00 0.00 4.63
645 2521 0.962855 CTCACACTCCTCTCCTCGCA 60.963 60.000 0.00 0.00 0.00 5.10
665 2541 0.597637 CCCCGTCGAAATCCAGATCG 60.598 60.000 0.00 0.00 40.31 3.69
672 2548 3.865745 GTCGAAATCCAGATCGTTCACAT 59.134 43.478 0.00 0.00 39.91 3.21
1409 3287 1.247567 TTTAGCTGCCTGGCTTGTTC 58.752 50.000 21.03 4.33 42.97 3.18
1735 3619 5.508872 GCAAGTGCACATGATTCTTAGATC 58.491 41.667 25.26 0.01 41.59 2.75
1813 3697 4.154737 GCTTTTGATTTTTGGCTGATTCCC 59.845 41.667 0.00 0.00 0.00 3.97
1819 3703 2.897271 TTTGGCTGATTCCCTTGCTA 57.103 45.000 0.00 0.00 0.00 3.49
1827 3711 5.182760 GGCTGATTCCCTTGCTATTAATCTG 59.817 44.000 0.00 0.00 0.00 2.90
1834 3718 5.584649 TCCCTTGCTATTAATCTGACGTTTG 59.415 40.000 0.00 0.00 0.00 2.93
1918 3802 7.234384 CAGGTACTTTTTGCTCGTTTATGTAG 58.766 38.462 0.00 0.00 34.60 2.74
1961 3845 7.682787 ACATTTTGATAGGTCTGGACTATCT 57.317 36.000 12.14 3.90 44.46 1.98
1973 3857 6.592220 GGTCTGGACTATCTTCTTGAAAGTTC 59.408 42.308 0.67 0.00 0.00 3.01
2062 3948 6.669591 TCCTCACAAGACTATATATCCCCATG 59.330 42.308 0.00 0.00 0.00 3.66
2086 3972 7.870826 TGTAATGTGGTTATTTTCACTGTCTG 58.129 34.615 0.00 0.00 35.15 3.51
2087 3973 6.959639 AATGTGGTTATTTTCACTGTCTGT 57.040 33.333 0.00 0.00 35.15 3.41
2088 3974 6.959639 ATGTGGTTATTTTCACTGTCTGTT 57.040 33.333 0.00 0.00 35.15 3.16
2129 4015 0.961019 TGCAGATCAAAAGGTGTGCC 59.039 50.000 0.00 0.00 0.00 5.01
2689 4575 0.893270 TGTTTGGATGAAGTGGGCGG 60.893 55.000 0.00 0.00 0.00 6.13
2824 4802 5.470437 CAGATGGTCAGAAATGATGGATGAG 59.530 44.000 0.00 0.00 0.00 2.90
2933 4911 5.064325 GGGGTTAGACGTGTCATAAATGTTC 59.936 44.000 0.00 0.00 0.00 3.18
2939 4917 3.190535 ACGTGTCATAAATGTTCCAAGCC 59.809 43.478 0.00 0.00 0.00 4.35
3361 5476 8.203485 AGCAGGTGAAAATATTGTTTCAGAAAA 58.797 29.630 0.00 0.00 45.65 2.29
3391 5506 2.166459 GCCTTGCCCTGTTCTATTTTCC 59.834 50.000 0.00 0.00 0.00 3.13
3413 5528 6.785076 TCCCTTACTGATATTTTGTTGGTCA 58.215 36.000 0.00 0.00 0.00 4.02
4018 6136 2.218953 TCCGTGAACCTTGCGATATC 57.781 50.000 0.00 0.00 0.00 1.63
4046 6164 7.324354 CTTCTAGTGAGGAAGTTAGTACTCC 57.676 44.000 0.00 0.00 36.42 3.85
4047 6165 5.753716 TCTAGTGAGGAAGTTAGTACTCCC 58.246 45.833 0.00 0.00 31.99 4.30
4048 6166 4.678538 AGTGAGGAAGTTAGTACTCCCT 57.321 45.455 0.00 0.00 42.67 4.20
4051 6169 3.015675 AGGAAGTTAGTACTCCCTCCG 57.984 52.381 0.00 0.00 33.00 4.63
4052 6170 2.311243 AGGAAGTTAGTACTCCCTCCGT 59.689 50.000 0.00 0.00 33.00 4.69
4053 6171 2.687425 GGAAGTTAGTACTCCCTCCGTC 59.313 54.545 0.00 0.00 31.99 4.79
4054 6172 2.433662 AGTTAGTACTCCCTCCGTCC 57.566 55.000 0.00 0.00 0.00 4.79
4055 6173 1.064091 AGTTAGTACTCCCTCCGTCCC 60.064 57.143 0.00 0.00 0.00 4.46
4056 6174 1.002069 TTAGTACTCCCTCCGTCCCA 58.998 55.000 0.00 0.00 0.00 4.37
4057 6175 1.229131 TAGTACTCCCTCCGTCCCAT 58.771 55.000 0.00 0.00 0.00 4.00
4058 6176 1.229131 AGTACTCCCTCCGTCCCATA 58.771 55.000 0.00 0.00 0.00 2.74
4059 6177 1.572415 AGTACTCCCTCCGTCCCATAA 59.428 52.381 0.00 0.00 0.00 1.90
4060 6178 2.179424 AGTACTCCCTCCGTCCCATAAT 59.821 50.000 0.00 0.00 0.00 1.28
4061 6179 3.400322 AGTACTCCCTCCGTCCCATAATA 59.600 47.826 0.00 0.00 0.00 0.98
4062 6180 3.562108 ACTCCCTCCGTCCCATAATAT 57.438 47.619 0.00 0.00 0.00 1.28
4063 6181 4.687262 ACTCCCTCCGTCCCATAATATA 57.313 45.455 0.00 0.00 0.00 0.86
4064 6182 5.019657 ACTCCCTCCGTCCCATAATATAA 57.980 43.478 0.00 0.00 0.00 0.98
4065 6183 5.024118 ACTCCCTCCGTCCCATAATATAAG 58.976 45.833 0.00 0.00 0.00 1.73
4066 6184 5.222484 ACTCCCTCCGTCCCATAATATAAGA 60.222 44.000 0.00 0.00 0.00 2.10
4067 6185 5.269991 TCCCTCCGTCCCATAATATAAGAG 58.730 45.833 0.00 0.00 0.00 2.85
4068 6186 4.141914 CCCTCCGTCCCATAATATAAGAGC 60.142 50.000 0.00 0.00 0.00 4.09
4069 6187 4.440250 CCTCCGTCCCATAATATAAGAGCG 60.440 50.000 0.00 0.00 0.00 5.03
4070 6188 4.084287 TCCGTCCCATAATATAAGAGCGT 58.916 43.478 0.00 0.00 0.00 5.07
4071 6189 4.525487 TCCGTCCCATAATATAAGAGCGTT 59.475 41.667 0.00 0.00 0.00 4.84
4072 6190 5.011329 TCCGTCCCATAATATAAGAGCGTTT 59.989 40.000 0.00 0.00 0.00 3.60
4073 6191 5.699458 CCGTCCCATAATATAAGAGCGTTTT 59.301 40.000 0.00 0.00 0.00 2.43
4074 6192 6.204108 CCGTCCCATAATATAAGAGCGTTTTT 59.796 38.462 0.00 0.00 0.00 1.94
4099 6217 6.701432 ATACTACACTAGTGTCAAAAACGC 57.299 37.500 31.11 0.00 43.74 4.84
4101 6219 4.743644 ACTACACTAGTGTCAAAAACGCTC 59.256 41.667 31.11 0.00 45.69 5.03
4102 6220 3.793559 ACACTAGTGTCAAAAACGCTCT 58.206 40.909 22.95 0.00 45.69 4.09
4103 6221 4.189231 ACACTAGTGTCAAAAACGCTCTT 58.811 39.130 22.95 0.00 45.69 2.85
4104 6222 5.353938 ACACTAGTGTCAAAAACGCTCTTA 58.646 37.500 22.95 0.00 45.69 2.10
4105 6223 5.989777 ACACTAGTGTCAAAAACGCTCTTAT 59.010 36.000 22.95 0.00 45.69 1.73
4106 6224 6.073765 ACACTAGTGTCAAAAACGCTCTTATG 60.074 38.462 22.95 0.00 45.69 1.90
4107 6225 5.989777 ACTAGTGTCAAAAACGCTCTTATGT 59.010 36.000 0.00 0.00 45.69 2.29
4108 6226 5.751243 AGTGTCAAAAACGCTCTTATGTT 57.249 34.783 0.00 0.00 45.69 2.71
4109 6227 6.854496 AGTGTCAAAAACGCTCTTATGTTA 57.146 33.333 0.00 0.00 45.69 2.41
4110 6228 7.435068 AGTGTCAAAAACGCTCTTATGTTAT 57.565 32.000 0.00 0.00 45.69 1.89
4111 6229 7.298122 AGTGTCAAAAACGCTCTTATGTTATG 58.702 34.615 0.00 0.00 45.69 1.90
4112 6230 6.523201 GTGTCAAAAACGCTCTTATGTTATGG 59.477 38.462 0.00 0.00 35.42 2.74
4113 6231 6.027749 GTCAAAAACGCTCTTATGTTATGGG 58.972 40.000 0.00 0.00 0.00 4.00
4114 6232 5.941058 TCAAAAACGCTCTTATGTTATGGGA 59.059 36.000 0.00 0.00 0.00 4.37
4115 6233 5.813080 AAAACGCTCTTATGTTATGGGAC 57.187 39.130 0.00 0.00 0.00 4.46
4116 6234 3.093717 ACGCTCTTATGTTATGGGACG 57.906 47.619 0.00 0.00 0.00 4.79
4117 6235 2.223971 ACGCTCTTATGTTATGGGACGG 60.224 50.000 0.00 0.00 0.00 4.79
4118 6236 2.035449 CGCTCTTATGTTATGGGACGGA 59.965 50.000 0.00 0.00 0.00 4.69
4119 6237 3.654414 GCTCTTATGTTATGGGACGGAG 58.346 50.000 0.00 0.00 0.00 4.63
4120 6238 3.555168 GCTCTTATGTTATGGGACGGAGG 60.555 52.174 0.00 0.00 0.00 4.30
4121 6239 2.969950 TCTTATGTTATGGGACGGAGGG 59.030 50.000 0.00 0.00 0.00 4.30
4232 6350 4.712829 TGATGTCATTCCAATGCCAGATTT 59.287 37.500 0.00 0.00 36.36 2.17
4360 6594 4.621034 CGTTTTTGAACATAAGGTGGATGC 59.379 41.667 0.00 0.00 0.00 3.91
4669 6903 1.668151 GGTGTGCGGTGGAGTTCTC 60.668 63.158 0.00 0.00 0.00 2.87
5272 7719 4.830826 AACACTTCCCGTCTTCATTTTC 57.169 40.909 0.00 0.00 0.00 2.29
5286 7733 7.202526 GTCTTCATTTTCTTTTCATGTGTCCA 58.797 34.615 0.00 0.00 0.00 4.02
5413 7860 6.653320 GGTTTGTGGAATCTCAGTAACACATA 59.347 38.462 0.00 0.00 38.46 2.29
5844 8294 6.331061 CCGAAGTAAGCTGTGTCTTATACTT 58.669 40.000 3.45 3.45 31.27 2.24
6035 8485 6.436261 CGCGATTCTTCTTGTAGGTAAGATA 58.564 40.000 0.00 0.00 36.63 1.98
6349 8813 6.868339 AGTGAAAATCCTAATTTGAAAAGGCG 59.132 34.615 0.00 0.00 35.27 5.52
6387 8851 3.005791 GCTTGTGTTGCAGTCCCTAAATT 59.994 43.478 0.00 0.00 0.00 1.82
6834 9298 5.147162 GGAATTTCTGTTGCTGTTTCTACG 58.853 41.667 0.00 0.00 0.00 3.51
7281 9745 4.215109 GGGTTAGCAATCTCTCTCTCTCT 58.785 47.826 0.00 0.00 0.00 3.10
7283 9747 5.133221 GGTTAGCAATCTCTCTCTCTCTCT 58.867 45.833 0.00 0.00 0.00 3.10
7307 9782 7.397476 TCTCTCTCATCATCATCATCATCATCA 59.603 37.037 0.00 0.00 0.00 3.07
7308 9783 8.083828 TCTCTCATCATCATCATCATCATCAT 57.916 34.615 0.00 0.00 0.00 2.45
7309 9784 7.984050 TCTCTCATCATCATCATCATCATCATG 59.016 37.037 0.00 0.00 0.00 3.07
7316 9791 9.216117 TCATCATCATCATCATCATGTTACTTC 57.784 33.333 0.00 0.00 0.00 3.01
7475 9950 2.102420 TGGTGTCGTTGTCTTCATCTGT 59.898 45.455 0.00 0.00 0.00 3.41
7530 10005 4.179579 GCGCATTCCTTCACGCCC 62.180 66.667 0.30 0.00 45.35 6.13
7643 10118 2.062519 GAAGAGTGAGCTCGTCCAAAC 58.937 52.381 9.64 0.00 46.03 2.93
7720 10195 4.090729 CAATCATTGTTTGTCACGGATCG 58.909 43.478 0.00 0.00 0.00 3.69
7889 10364 2.939022 GAGTTGTGCACTCGTGGC 59.061 61.111 19.41 1.90 42.82 5.01
7976 10452 4.382793 GGTTATTCTCGGGCTCACTTTACT 60.383 45.833 0.00 0.00 0.00 2.24
7984 10460 3.865745 CGGGCTCACTTTACTGTCTTATG 59.134 47.826 0.00 0.00 0.00 1.90
8026 10511 4.424061 TTCCTTGAGACGATTGCATTTG 57.576 40.909 0.00 0.00 0.00 2.32
8039 10524 6.079763 CGATTGCATTTGGGAATAGATTACG 58.920 40.000 0.00 0.00 37.71 3.18
8041 10526 5.042463 TGCATTTGGGAATAGATTACGGA 57.958 39.130 0.00 0.00 0.00 4.69
8046 10531 7.227910 GCATTTGGGAATAGATTACGGAAGTTA 59.772 37.037 0.00 0.00 46.40 2.24
8058 10543 7.867403 AGATTACGGAAGTTAGTTTCAAACGTA 59.133 33.333 0.00 0.00 46.40 3.57
8060 10545 5.351458 ACGGAAGTTAGTTTCAAACGTAGT 58.649 37.500 0.00 0.00 45.79 2.73
8066 10551 6.214399 AGTTAGTTTCAAACGTAGTCAGAGG 58.786 40.000 0.00 0.00 45.00 3.69
8068 10553 2.450609 TTCAAACGTAGTCAGAGGCC 57.549 50.000 0.00 0.00 45.00 5.19
8109 10601 3.641046 ACTCTACCATCTGATGTCAGCT 58.359 45.455 15.95 0.00 43.46 4.24
8110 10602 3.384146 ACTCTACCATCTGATGTCAGCTG 59.616 47.826 15.95 7.63 43.46 4.24
8111 10603 3.369175 TCTACCATCTGATGTCAGCTGT 58.631 45.455 14.67 8.23 43.46 4.40
8112 10604 4.536765 TCTACCATCTGATGTCAGCTGTA 58.463 43.478 14.67 4.66 43.46 2.74
8113 10605 4.956075 TCTACCATCTGATGTCAGCTGTAA 59.044 41.667 14.67 3.38 43.46 2.41
8114 10606 4.558226 ACCATCTGATGTCAGCTGTAAA 57.442 40.909 14.67 0.58 43.46 2.01
8115 10607 4.511527 ACCATCTGATGTCAGCTGTAAAG 58.488 43.478 14.67 6.02 43.46 1.85
8117 10609 4.569966 CCATCTGATGTCAGCTGTAAAGAC 59.430 45.833 14.67 4.45 43.46 3.01
8120 10612 4.524328 TCTGATGTCAGCTGTAAAGACTGA 59.476 41.667 14.67 8.34 43.46 3.41
8123 10615 2.065993 TCAGCTGTAAAGACTGACGC 57.934 50.000 14.67 0.00 35.58 5.19
8126 10618 0.440371 GCTGTAAAGACTGACGCTGC 59.560 55.000 0.00 0.00 0.00 5.25
8129 10621 1.009389 GTAAAGACTGACGCTGCGCT 61.009 55.000 23.51 9.50 0.00 5.92
8130 10622 0.319555 TAAAGACTGACGCTGCGCTT 60.320 50.000 23.51 13.69 0.00 4.68
8131 10623 1.835483 AAAGACTGACGCTGCGCTTG 61.835 55.000 23.51 14.05 0.00 4.01
8132 10624 2.699576 AAGACTGACGCTGCGCTTGA 62.700 55.000 23.51 2.22 0.00 3.02
8133 10625 2.724708 GACTGACGCTGCGCTTGAG 61.725 63.158 23.51 14.43 0.00 3.02
8134 10626 3.485431 CTGACGCTGCGCTTGAGG 61.485 66.667 23.51 2.90 0.00 3.86
8135 10627 4.299547 TGACGCTGCGCTTGAGGT 62.300 61.111 23.51 0.00 0.00 3.85
8140 10632 2.828128 GCTGCGCTTGAGGTATGCC 61.828 63.158 9.73 0.00 0.00 4.40
8157 10649 0.110056 GCCATGCTTGTCGTCAACTG 60.110 55.000 0.00 0.00 0.00 3.16
8167 10659 2.059541 GTCGTCAACTGTTACCTGAGC 58.940 52.381 0.00 0.00 0.00 4.26
8168 10660 1.000506 TCGTCAACTGTTACCTGAGCC 59.999 52.381 0.00 0.00 0.00 4.70
8169 10661 1.270094 CGTCAACTGTTACCTGAGCCA 60.270 52.381 0.00 0.00 0.00 4.75
8170 10662 2.417719 GTCAACTGTTACCTGAGCCAG 58.582 52.381 0.00 0.00 0.00 4.85
8172 10664 2.300152 TCAACTGTTACCTGAGCCAGAG 59.700 50.000 4.00 0.00 32.44 3.35
8198 10702 4.706962 GCTAGTCAACAATGAGGGGAAAAT 59.293 41.667 0.00 0.00 35.88 1.82
8225 10729 7.519032 AATTTGTATACGGGTCATATTTGGG 57.481 36.000 0.00 0.00 0.00 4.12
8229 10733 0.916086 ACGGGTCATATTTGGGCTCA 59.084 50.000 0.00 0.00 0.00 4.26
8234 10738 3.706086 GGGTCATATTTGGGCTCACAATT 59.294 43.478 0.00 0.00 0.00 2.32
8237 10741 5.505654 GGTCATATTTGGGCTCACAATTACG 60.506 44.000 0.00 0.00 0.00 3.18
8282 10789 5.128827 AGGCGTCAGGATCACTAAAGAAATA 59.871 40.000 0.00 0.00 0.00 1.40
8286 10793 6.697892 CGTCAGGATCACTAAAGAAATACTCC 59.302 42.308 0.00 0.00 0.00 3.85
8339 10848 7.440523 AGTATATTTTGCAGCTATACAAGGC 57.559 36.000 17.52 0.00 32.97 4.35
8340 10849 6.998074 AGTATATTTTGCAGCTATACAAGGCA 59.002 34.615 17.52 0.00 32.97 4.75
8341 10850 6.713762 ATATTTTGCAGCTATACAAGGCAA 57.286 33.333 1.58 1.58 42.15 4.52
8342 10851 3.848272 TTTGCAGCTATACAAGGCAAC 57.152 42.857 5.00 0.00 43.38 4.17
8343 10852 2.488204 TGCAGCTATACAAGGCAACA 57.512 45.000 0.00 0.00 41.41 3.33
8344 10853 2.789213 TGCAGCTATACAAGGCAACAA 58.211 42.857 0.00 0.00 41.41 2.83
8345 10854 3.153130 TGCAGCTATACAAGGCAACAAA 58.847 40.909 0.00 0.00 41.41 2.83
8346 10855 3.763360 TGCAGCTATACAAGGCAACAAAT 59.237 39.130 0.00 0.00 41.41 2.32
8347 10856 4.107622 GCAGCTATACAAGGCAACAAATG 58.892 43.478 0.00 0.00 41.41 2.32
8348 10857 4.380867 GCAGCTATACAAGGCAACAAATGT 60.381 41.667 0.00 0.00 41.41 2.71
8349 10858 5.713025 CAGCTATACAAGGCAACAAATGTT 58.287 37.500 0.00 0.00 39.12 2.71
8350 10859 6.624861 GCAGCTATACAAGGCAACAAATGTTA 60.625 38.462 0.00 0.00 36.32 2.41
8351 10860 7.312154 CAGCTATACAAGGCAACAAATGTTAA 58.688 34.615 0.00 0.00 36.32 2.01
8352 10861 7.975616 CAGCTATACAAGGCAACAAATGTTAAT 59.024 33.333 0.00 0.00 36.32 1.40
8353 10862 8.190784 AGCTATACAAGGCAACAAATGTTAATC 58.809 33.333 0.00 0.00 36.32 1.75
8354 10863 7.973388 GCTATACAAGGCAACAAATGTTAATCA 59.027 33.333 0.00 0.00 36.32 2.57
8355 10864 9.853555 CTATACAAGGCAACAAATGTTAATCAA 57.146 29.630 0.00 0.00 36.32 2.57
8356 10865 8.761575 ATACAAGGCAACAAATGTTAATCAAG 57.238 30.769 0.00 0.00 36.32 3.02
8357 10866 6.581712 ACAAGGCAACAAATGTTAATCAAGT 58.418 32.000 0.00 0.00 36.32 3.16
8358 10867 7.721402 ACAAGGCAACAAATGTTAATCAAGTA 58.279 30.769 0.00 0.00 36.32 2.24
8359 10868 8.367156 ACAAGGCAACAAATGTTAATCAAGTAT 58.633 29.630 0.00 0.00 36.32 2.12
8360 10869 9.853555 CAAGGCAACAAATGTTAATCAAGTATA 57.146 29.630 0.00 0.00 36.32 1.47
8363 10872 9.855021 GGCAACAAATGTTAATCAAGTATAAGT 57.145 29.630 0.00 0.00 36.32 2.24
8391 10900 7.317842 TGGAGTAGTACATCTAGAAGAAACG 57.682 40.000 1.17 0.00 0.00 3.60
8392 10901 6.183360 TGGAGTAGTACATCTAGAAGAAACGC 60.183 42.308 1.17 0.00 0.00 4.84
8393 10902 5.808403 AGTAGTACATCTAGAAGAAACGCG 58.192 41.667 3.53 3.53 0.00 6.01
8394 10903 4.959596 AGTACATCTAGAAGAAACGCGA 57.040 40.909 15.93 0.00 0.00 5.87
8395 10904 4.660105 AGTACATCTAGAAGAAACGCGAC 58.340 43.478 15.93 3.56 0.00 5.19
8396 10905 2.516923 ACATCTAGAAGAAACGCGACG 58.483 47.619 15.93 0.00 0.00 5.12
8397 10906 2.095364 ACATCTAGAAGAAACGCGACGT 60.095 45.455 15.93 1.50 43.97 4.34
8406 10915 3.932289 ACGCGACGTTCTTCCTTG 58.068 55.556 15.93 0.00 36.35 3.61
8407 10916 1.663702 ACGCGACGTTCTTCCTTGG 60.664 57.895 15.93 0.00 36.35 3.61
8408 10917 1.663702 CGCGACGTTCTTCCTTGGT 60.664 57.895 0.00 0.00 0.00 3.67
8409 10918 1.615107 CGCGACGTTCTTCCTTGGTC 61.615 60.000 0.00 0.00 0.00 4.02
8410 10919 2.431539 CGACGTTCTTCCTTGGTCG 58.568 57.895 0.00 0.00 43.43 4.79
8411 10920 0.318445 CGACGTTCTTCCTTGGTCGT 60.318 55.000 3.93 0.00 43.81 4.34
8412 10921 1.137513 GACGTTCTTCCTTGGTCGTG 58.862 55.000 0.00 0.00 0.00 4.35
8413 10922 0.748450 ACGTTCTTCCTTGGTCGTGA 59.252 50.000 0.00 0.00 0.00 4.35
8414 10923 1.269621 ACGTTCTTCCTTGGTCGTGAG 60.270 52.381 0.00 0.00 0.00 3.51
8415 10924 1.269621 CGTTCTTCCTTGGTCGTGAGT 60.270 52.381 0.00 0.00 0.00 3.41
8416 10925 2.802057 CGTTCTTCCTTGGTCGTGAGTT 60.802 50.000 0.00 0.00 0.00 3.01
8417 10926 3.551454 CGTTCTTCCTTGGTCGTGAGTTA 60.551 47.826 0.00 0.00 0.00 2.24
8418 10927 4.566987 GTTCTTCCTTGGTCGTGAGTTAT 58.433 43.478 0.00 0.00 0.00 1.89
8419 10928 5.620654 CGTTCTTCCTTGGTCGTGAGTTATA 60.621 44.000 0.00 0.00 0.00 0.98
8420 10929 5.578005 TCTTCCTTGGTCGTGAGTTATAG 57.422 43.478 0.00 0.00 0.00 1.31
8421 10930 4.401519 TCTTCCTTGGTCGTGAGTTATAGG 59.598 45.833 0.00 0.00 0.00 2.57
8422 10931 3.028850 TCCTTGGTCGTGAGTTATAGGG 58.971 50.000 0.00 0.00 0.00 3.53
8423 10932 2.483188 CCTTGGTCGTGAGTTATAGGGC 60.483 54.545 0.00 0.00 0.00 5.19
8424 10933 0.742505 TGGTCGTGAGTTATAGGGCG 59.257 55.000 0.00 0.00 0.00 6.13
8425 10934 0.743097 GGTCGTGAGTTATAGGGCGT 59.257 55.000 0.00 0.00 0.00 5.68
8426 10935 1.535437 GGTCGTGAGTTATAGGGCGTG 60.535 57.143 0.00 0.00 0.00 5.34
8427 10936 1.133790 GTCGTGAGTTATAGGGCGTGT 59.866 52.381 0.00 0.00 0.00 4.49
8428 10937 1.820519 TCGTGAGTTATAGGGCGTGTT 59.179 47.619 0.00 0.00 0.00 3.32
8429 10938 2.231964 TCGTGAGTTATAGGGCGTGTTT 59.768 45.455 0.00 0.00 0.00 2.83
8430 10939 2.347452 CGTGAGTTATAGGGCGTGTTTG 59.653 50.000 0.00 0.00 0.00 2.93
8431 10940 2.676342 GTGAGTTATAGGGCGTGTTTGG 59.324 50.000 0.00 0.00 0.00 3.28
8432 10941 2.303600 TGAGTTATAGGGCGTGTTTGGT 59.696 45.455 0.00 0.00 0.00 3.67
8433 10942 3.244630 TGAGTTATAGGGCGTGTTTGGTT 60.245 43.478 0.00 0.00 0.00 3.67
8434 10943 3.078837 AGTTATAGGGCGTGTTTGGTTG 58.921 45.455 0.00 0.00 0.00 3.77
8435 10944 1.455248 TATAGGGCGTGTTTGGTTGC 58.545 50.000 0.00 0.00 0.00 4.17
8436 10945 1.248101 ATAGGGCGTGTTTGGTTGCC 61.248 55.000 0.00 0.00 46.82 4.52
8438 10947 3.894947 GGCGTGTTTGGTTGCCGT 61.895 61.111 0.00 0.00 37.81 5.68
8439 10948 2.653766 GCGTGTTTGGTTGCCGTG 60.654 61.111 0.00 0.00 0.00 4.94
8440 10949 2.653766 CGTGTTTGGTTGCCGTGC 60.654 61.111 0.00 0.00 0.00 5.34
8441 10950 2.653766 GTGTTTGGTTGCCGTGCG 60.654 61.111 0.00 0.00 0.00 5.34
8442 10951 4.560856 TGTTTGGTTGCCGTGCGC 62.561 61.111 0.00 0.00 38.31 6.09
8443 10952 4.264638 GTTTGGTTGCCGTGCGCT 62.265 61.111 9.73 0.00 38.78 5.92
8444 10953 2.592001 TTTGGTTGCCGTGCGCTA 60.592 55.556 9.73 0.00 38.78 4.26
8445 10954 2.899044 TTTGGTTGCCGTGCGCTAC 61.899 57.895 9.73 4.27 41.82 3.58
8446 10955 4.610714 TGGTTGCCGTGCGCTACA 62.611 61.111 9.73 0.00 44.01 2.74
8447 10956 3.788766 GGTTGCCGTGCGCTACAG 61.789 66.667 9.73 0.00 44.01 2.74
8448 10957 3.041940 GTTGCCGTGCGCTACAGT 61.042 61.111 9.73 0.00 42.09 3.55
8449 10958 3.041351 TTGCCGTGCGCTACAGTG 61.041 61.111 9.73 0.00 38.78 3.66
8450 10959 3.800685 TTGCCGTGCGCTACAGTGT 62.801 57.895 9.73 0.00 38.78 3.55
8451 10960 3.479269 GCCGTGCGCTACAGTGTC 61.479 66.667 9.73 0.00 0.00 3.67
8452 10961 2.809601 CCGTGCGCTACAGTGTCC 60.810 66.667 9.73 0.00 0.00 4.02
8453 10962 3.172575 CGTGCGCTACAGTGTCCG 61.173 66.667 9.73 5.40 0.00 4.79
8454 10963 3.479269 GTGCGCTACAGTGTCCGC 61.479 66.667 25.51 25.51 45.99 5.54
8456 10965 2.509336 GCGCTACAGTGTCCGCAT 60.509 61.111 26.62 0.00 45.21 4.73
8457 10966 2.100631 GCGCTACAGTGTCCGCATT 61.101 57.895 26.62 0.00 45.21 3.56
8458 10967 1.709760 CGCTACAGTGTCCGCATTG 59.290 57.895 15.24 0.00 38.17 2.82
8459 10968 1.425428 GCTACAGTGTCCGCATTGC 59.575 57.895 0.00 0.00 36.00 3.56
8460 10969 1.298157 GCTACAGTGTCCGCATTGCA 61.298 55.000 9.69 0.00 36.00 4.08
8461 10970 1.372582 CTACAGTGTCCGCATTGCAT 58.627 50.000 9.69 0.00 36.00 3.96
8462 10971 1.063027 CTACAGTGTCCGCATTGCATG 59.937 52.381 9.69 0.00 36.00 4.06
8473 10982 2.273370 CATTGCATGCACTTCTCCAC 57.727 50.000 22.58 0.00 0.00 4.02
8474 10983 1.135199 CATTGCATGCACTTCTCCACC 60.135 52.381 22.58 0.00 0.00 4.61
8475 10984 0.895100 TTGCATGCACTTCTCCACCC 60.895 55.000 22.58 0.00 0.00 4.61
8476 10985 1.303561 GCATGCACTTCTCCACCCA 60.304 57.895 14.21 0.00 0.00 4.51
8477 10986 0.895100 GCATGCACTTCTCCACCCAA 60.895 55.000 14.21 0.00 0.00 4.12
8478 10987 0.883833 CATGCACTTCTCCACCCAAC 59.116 55.000 0.00 0.00 0.00 3.77
8479 10988 0.251341 ATGCACTTCTCCACCCAACC 60.251 55.000 0.00 0.00 0.00 3.77
8480 10989 1.352622 TGCACTTCTCCACCCAACCT 61.353 55.000 0.00 0.00 0.00 3.50
8481 10990 0.890996 GCACTTCTCCACCCAACCTG 60.891 60.000 0.00 0.00 0.00 4.00
8482 10991 0.250901 CACTTCTCCACCCAACCTGG 60.251 60.000 0.00 0.00 37.25 4.45
8483 10992 0.697854 ACTTCTCCACCCAACCTGGT 60.698 55.000 0.00 0.00 39.96 4.00
8484 10993 0.478507 CTTCTCCACCCAACCTGGTT 59.521 55.000 6.18 6.18 36.12 3.67
8485 10994 1.702957 CTTCTCCACCCAACCTGGTTA 59.297 52.381 12.53 0.00 36.12 2.85
8486 10995 2.053747 TCTCCACCCAACCTGGTTAT 57.946 50.000 12.53 0.00 36.12 1.89
8487 10996 1.633432 TCTCCACCCAACCTGGTTATG 59.367 52.381 12.53 10.70 36.12 1.90
8488 10997 0.039035 TCCACCCAACCTGGTTATGC 59.961 55.000 12.53 0.00 36.12 3.14
8489 10998 0.251564 CCACCCAACCTGGTTATGCA 60.252 55.000 12.53 0.00 36.12 3.96
8490 10999 1.626686 CACCCAACCTGGTTATGCAA 58.373 50.000 12.53 0.00 36.12 4.08
8491 11000 1.967066 CACCCAACCTGGTTATGCAAA 59.033 47.619 12.53 0.00 36.12 3.68
8492 11001 2.566724 CACCCAACCTGGTTATGCAAAT 59.433 45.455 12.53 0.00 36.12 2.32
8493 11002 2.566724 ACCCAACCTGGTTATGCAAATG 59.433 45.455 12.53 0.00 33.91 2.32
8494 11003 2.620242 CCAACCTGGTTATGCAAATGC 58.380 47.619 12.53 0.00 35.49 3.56
8495 11004 2.028294 CCAACCTGGTTATGCAAATGCA 60.028 45.455 12.53 10.94 43.69 3.96
8496 11005 3.923877 CCAACCTGGTTATGCAAATGCAG 60.924 47.826 12.53 0.95 43.17 4.41
8509 11018 3.865164 GCAAATGCAGCCTTAAATGTACC 59.135 43.478 0.00 0.00 41.59 3.34
8510 11019 4.620332 GCAAATGCAGCCTTAAATGTACCA 60.620 41.667 0.00 0.00 41.59 3.25
8511 11020 5.663456 CAAATGCAGCCTTAAATGTACCAT 58.337 37.500 0.00 0.00 0.00 3.55
8512 11021 5.520376 AATGCAGCCTTAAATGTACCATC 57.480 39.130 0.00 0.00 0.00 3.51
8513 11022 2.942376 TGCAGCCTTAAATGTACCATCG 59.058 45.455 0.00 0.00 0.00 3.84
8514 11023 2.290641 GCAGCCTTAAATGTACCATCGG 59.709 50.000 0.00 0.00 0.00 4.18
8515 11024 2.290641 CAGCCTTAAATGTACCATCGGC 59.709 50.000 0.00 0.00 36.58 5.54
8516 11025 2.092646 AGCCTTAAATGTACCATCGGCA 60.093 45.455 0.00 0.00 38.71 5.69
8517 11026 2.884639 GCCTTAAATGTACCATCGGCAT 59.115 45.455 0.00 0.00 36.37 4.40
8518 11027 3.304659 GCCTTAAATGTACCATCGGCATG 60.305 47.826 0.00 0.00 36.37 4.06
8519 11028 3.882888 CCTTAAATGTACCATCGGCATGT 59.117 43.478 0.00 0.00 0.00 3.21
8520 11029 4.338118 CCTTAAATGTACCATCGGCATGTT 59.662 41.667 0.00 0.00 0.00 2.71
8521 11030 3.781079 AAATGTACCATCGGCATGTTG 57.219 42.857 0.00 0.00 0.00 3.33
8522 11031 2.418368 ATGTACCATCGGCATGTTGT 57.582 45.000 0.00 0.00 0.00 3.32
8523 11032 2.192664 TGTACCATCGGCATGTTGTT 57.807 45.000 0.00 0.00 0.00 2.83
8524 11033 2.509569 TGTACCATCGGCATGTTGTTT 58.490 42.857 0.00 0.00 0.00 2.83
8525 11034 2.227626 TGTACCATCGGCATGTTGTTTG 59.772 45.455 0.00 0.00 0.00 2.93
8526 11035 0.602562 ACCATCGGCATGTTGTTTGG 59.397 50.000 0.00 0.00 0.00 3.28
8527 11036 0.602562 CCATCGGCATGTTGTTTGGT 59.397 50.000 0.00 0.00 0.00 3.67
8528 11037 1.402720 CCATCGGCATGTTGTTTGGTC 60.403 52.381 0.00 0.00 0.00 4.02
8529 11038 0.521291 ATCGGCATGTTGTTTGGTCG 59.479 50.000 0.00 0.00 0.00 4.79
8530 11039 1.729131 CGGCATGTTGTTTGGTCGC 60.729 57.895 0.00 0.00 0.00 5.19
8531 11040 1.372872 GGCATGTTGTTTGGTCGCC 60.373 57.895 0.00 0.00 0.00 5.54
8532 11041 1.659794 GCATGTTGTTTGGTCGCCT 59.340 52.632 0.00 0.00 0.00 5.52
8533 11042 0.664166 GCATGTTGTTTGGTCGCCTG 60.664 55.000 0.00 0.00 0.00 4.85
8534 11043 0.664166 CATGTTGTTTGGTCGCCTGC 60.664 55.000 0.00 0.00 0.00 4.85
8535 11044 1.106351 ATGTTGTTTGGTCGCCTGCA 61.106 50.000 0.00 0.00 0.00 4.41
8536 11045 1.106351 TGTTGTTTGGTCGCCTGCAT 61.106 50.000 0.00 0.00 0.00 3.96
8537 11046 0.664166 GTTGTTTGGTCGCCTGCATG 60.664 55.000 0.00 0.00 0.00 4.06
8538 11047 1.804396 TTGTTTGGTCGCCTGCATGG 61.804 55.000 0.00 0.00 39.35 3.66
8555 11064 3.145551 GCCTCTTGCCTGCATGGG 61.146 66.667 5.34 1.91 36.00 4.00
8572 11081 4.606071 GCAGAGCCACACTACCTG 57.394 61.111 0.00 0.00 0.00 4.00
8573 11082 1.078848 GCAGAGCCACACTACCTGG 60.079 63.158 0.00 0.00 0.00 4.45
8574 11083 1.831652 GCAGAGCCACACTACCTGGT 61.832 60.000 4.05 4.05 0.00 4.00
8575 11084 0.036952 CAGAGCCACACTACCTGGTG 60.037 60.000 10.23 2.08 42.34 4.17
8577 11086 0.396811 GAGCCACACTACCTGGTGTT 59.603 55.000 10.23 0.00 46.71 3.32
8578 11087 0.843984 AGCCACACTACCTGGTGTTT 59.156 50.000 10.23 0.00 46.71 2.83
8579 11088 0.951558 GCCACACTACCTGGTGTTTG 59.048 55.000 10.23 8.75 46.71 2.93
8580 11089 1.604604 CCACACTACCTGGTGTTTGG 58.395 55.000 10.23 13.57 46.71 3.28
8581 11090 1.133915 CCACACTACCTGGTGTTTGGT 60.134 52.381 10.23 0.00 46.71 3.67
8582 11091 2.650322 CACACTACCTGGTGTTTGGTT 58.350 47.619 10.23 0.00 46.71 3.67
8583 11092 2.357637 CACACTACCTGGTGTTTGGTTG 59.642 50.000 10.23 0.00 46.71 3.77
8584 11093 1.336755 CACTACCTGGTGTTTGGTTGC 59.663 52.381 10.23 0.00 37.74 4.17
8585 11094 0.958822 CTACCTGGTGTTTGGTTGCC 59.041 55.000 10.23 0.00 37.74 4.52
8586 11095 0.553819 TACCTGGTGTTTGGTTGCCT 59.446 50.000 10.23 0.00 37.74 4.75
8587 11096 1.042559 ACCTGGTGTTTGGTTGCCTG 61.043 55.000 0.00 0.00 31.62 4.85
8588 11097 1.067916 CTGGTGTTTGGTTGCCTGC 59.932 57.895 0.00 0.00 0.00 4.85
8589 11098 1.674764 CTGGTGTTTGGTTGCCTGCA 61.675 55.000 0.00 0.00 0.00 4.41
8590 11099 1.047596 TGGTGTTTGGTTGCCTGCAT 61.048 50.000 0.00 0.00 0.00 3.96
8591 11100 0.600782 GGTGTTTGGTTGCCTGCATG 60.601 55.000 0.00 0.00 0.00 4.06
8592 11101 0.104671 GTGTTTGGTTGCCTGCATGT 59.895 50.000 0.00 0.00 0.00 3.21
8593 11102 0.829333 TGTTTGGTTGCCTGCATGTT 59.171 45.000 0.00 0.00 0.00 2.71
8594 11103 2.034878 TGTTTGGTTGCCTGCATGTTA 58.965 42.857 0.00 0.00 0.00 2.41
8595 11104 2.035704 TGTTTGGTTGCCTGCATGTTAG 59.964 45.455 0.00 0.00 0.00 2.34
8596 11105 1.993956 TTGGTTGCCTGCATGTTAGT 58.006 45.000 0.00 0.00 0.00 2.24
8597 11106 1.246649 TGGTTGCCTGCATGTTAGTG 58.753 50.000 0.00 0.00 0.00 2.74
8598 11107 0.527565 GGTTGCCTGCATGTTAGTGG 59.472 55.000 0.00 0.00 0.00 4.00
8599 11108 1.533625 GTTGCCTGCATGTTAGTGGA 58.466 50.000 0.00 0.00 0.00 4.02
8600 11109 1.200020 GTTGCCTGCATGTTAGTGGAC 59.800 52.381 0.00 0.00 0.00 4.02
8601 11110 0.399833 TGCCTGCATGTTAGTGGACA 59.600 50.000 0.00 0.00 0.00 4.02
8602 11111 1.202867 TGCCTGCATGTTAGTGGACAA 60.203 47.619 0.00 0.00 32.47 3.18
8603 11112 1.885887 GCCTGCATGTTAGTGGACAAA 59.114 47.619 0.00 0.00 32.47 2.83
8604 11113 2.351738 GCCTGCATGTTAGTGGACAAAC 60.352 50.000 0.00 0.00 32.47 2.93
8605 11114 2.228822 CCTGCATGTTAGTGGACAAACC 59.771 50.000 0.00 0.00 39.54 3.27
8606 11115 2.228822 CTGCATGTTAGTGGACAAACCC 59.771 50.000 0.00 0.00 38.00 4.11
8607 11116 2.235016 GCATGTTAGTGGACAAACCCA 58.765 47.619 0.00 0.00 38.00 4.51
8608 11117 2.625790 GCATGTTAGTGGACAAACCCAA 59.374 45.455 0.00 0.00 38.06 4.12
8609 11118 3.305335 GCATGTTAGTGGACAAACCCAAG 60.305 47.826 0.00 0.00 38.06 3.61
8610 11119 2.938838 TGTTAGTGGACAAACCCAAGG 58.061 47.619 0.00 0.00 38.06 3.61
8611 11120 1.611977 GTTAGTGGACAAACCCAAGGC 59.388 52.381 0.00 0.00 38.06 4.35
8612 11121 0.847373 TAGTGGACAAACCCAAGGCA 59.153 50.000 0.00 0.00 38.06 4.75
8613 11122 0.188342 AGTGGACAAACCCAAGGCAT 59.812 50.000 0.00 0.00 38.06 4.40
8614 11123 0.318120 GTGGACAAACCCAAGGCATG 59.682 55.000 0.00 0.00 38.06 4.06
8623 11132 2.439837 CCAAGGCATGGTGTTTGGT 58.560 52.632 0.00 0.00 44.85 3.67
8624 11133 0.758123 CCAAGGCATGGTGTTTGGTT 59.242 50.000 0.00 0.00 44.85 3.67
8625 11134 1.967066 CCAAGGCATGGTGTTTGGTTA 59.033 47.619 0.00 0.00 44.85 2.85
8626 11135 2.566724 CCAAGGCATGGTGTTTGGTTAT 59.433 45.455 0.00 0.00 44.85 1.89
8627 11136 3.766591 CCAAGGCATGGTGTTTGGTTATA 59.233 43.478 0.00 0.00 44.85 0.98
8628 11137 4.405358 CCAAGGCATGGTGTTTGGTTATAT 59.595 41.667 0.00 0.00 44.85 0.86
8629 11138 5.350633 CAAGGCATGGTGTTTGGTTATATG 58.649 41.667 0.00 0.00 0.00 1.78
8630 11139 3.384467 AGGCATGGTGTTTGGTTATATGC 59.616 43.478 0.00 0.00 38.85 3.14
8631 11140 3.131933 GGCATGGTGTTTGGTTATATGCA 59.868 43.478 0.00 0.00 40.71 3.96
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.518636 CACGCTCTGTTCAATGGTGG 59.481 55.000 0.00 0.00 0.00 4.61
1 2 0.110056 GCACGCTCTGTTCAATGGTG 60.110 55.000 0.00 0.00 0.00 4.17
12 13 2.258591 CACCTACGTGCACGCTCT 59.741 61.111 37.35 21.75 44.43 4.09
13 14 2.049433 ACACCTACGTGCACGCTC 60.049 61.111 37.35 0.00 44.40 5.03
16 17 2.803670 CGGACACCTACGTGCACG 60.804 66.667 35.99 35.99 44.40 5.34
21 22 4.065281 GCCAGCGGACACCTACGT 62.065 66.667 0.00 0.00 0.00 3.57
42 43 1.665679 ACGAGGCACATTAGCAAATCG 59.334 47.619 0.00 0.00 40.21 3.34
51 52 0.392998 GACCCATCACGAGGCACATT 60.393 55.000 0.00 0.00 0.00 2.71
61 62 1.691976 TGGTATGGATCGACCCATCAC 59.308 52.381 16.75 10.22 43.07 3.06
68 69 2.748605 CAGCTCTTGGTATGGATCGAC 58.251 52.381 0.00 0.00 0.00 4.20
69 70 1.069204 GCAGCTCTTGGTATGGATCGA 59.931 52.381 0.00 0.00 0.00 3.59
72 73 0.833287 ACGCAGCTCTTGGTATGGAT 59.167 50.000 0.00 0.00 0.00 3.41
73 74 1.409064 CTACGCAGCTCTTGGTATGGA 59.591 52.381 0.00 0.00 0.00 3.41
79 80 2.887568 CGCCTACGCAGCTCTTGG 60.888 66.667 0.00 0.00 34.03 3.61
90 91 1.014352 CTGGTGTTTATGGCGCCTAC 58.986 55.000 29.70 19.51 37.40 3.18
100 101 3.509575 CCTTTAATGCTGGCTGGTGTTTA 59.490 43.478 0.00 0.00 0.00 2.01
109 110 0.174162 CTGGCACCTTTAATGCTGGC 59.826 55.000 0.00 2.10 42.93 4.85
112 113 3.010138 TCCTAACTGGCACCTTTAATGCT 59.990 43.478 0.00 0.00 42.93 3.79
114 115 3.378427 GCTCCTAACTGGCACCTTTAATG 59.622 47.826 0.00 0.00 35.26 1.90
115 116 3.267031 AGCTCCTAACTGGCACCTTTAAT 59.733 43.478 0.00 0.00 35.26 1.40
116 117 2.642807 AGCTCCTAACTGGCACCTTTAA 59.357 45.455 0.00 0.00 35.26 1.52
124 125 0.107459 CTTGGGAGCTCCTAACTGGC 60.107 60.000 31.36 13.93 32.77 4.85
136 137 6.672147 CAAAAGAACAATACAGTCTTGGGAG 58.328 40.000 3.88 0.00 0.00 4.30
169 170 1.318158 CCCAGCCCAGCTTGAACATC 61.318 60.000 0.00 0.00 36.40 3.06
170 171 1.304713 CCCAGCCCAGCTTGAACAT 60.305 57.895 0.00 0.00 36.40 2.71
177 178 1.918253 CTCATAACCCAGCCCAGCT 59.082 57.895 0.00 0.00 40.77 4.24
178 179 1.825622 GCTCATAACCCAGCCCAGC 60.826 63.158 0.00 0.00 0.00 4.85
179 180 0.184451 ATGCTCATAACCCAGCCCAG 59.816 55.000 0.00 0.00 34.47 4.45
180 181 1.142870 GTATGCTCATAACCCAGCCCA 59.857 52.381 0.00 0.00 34.47 5.36
181 182 1.878102 CGTATGCTCATAACCCAGCCC 60.878 57.143 0.00 0.00 34.47 5.19
182 183 1.512926 CGTATGCTCATAACCCAGCC 58.487 55.000 0.00 0.00 34.47 4.85
183 184 1.512926 CCGTATGCTCATAACCCAGC 58.487 55.000 0.00 0.00 36.08 4.85
184 185 1.691976 TCCCGTATGCTCATAACCCAG 59.308 52.381 0.00 0.00 0.00 4.45
185 186 1.691976 CTCCCGTATGCTCATAACCCA 59.308 52.381 0.00 0.00 0.00 4.51
186 187 1.692519 ACTCCCGTATGCTCATAACCC 59.307 52.381 0.00 0.00 0.00 4.11
187 188 2.288886 GGACTCCCGTATGCTCATAACC 60.289 54.545 0.00 0.00 0.00 2.85
188 189 3.027974 GGACTCCCGTATGCTCATAAC 57.972 52.381 0.00 0.00 0.00 1.89
230 248 7.674348 TGGGTCATAGACTCTCTCTTTCTTTTA 59.326 37.037 0.00 0.00 33.58 1.52
268 286 9.120538 GGCCAGAACATCTTACATTTATAAAGA 57.879 33.333 0.00 0.00 34.00 2.52
269 287 9.125026 AGGCCAGAACATCTTACATTTATAAAG 57.875 33.333 5.01 0.00 0.00 1.85
359 404 8.226810 TGTTTTGGATATCTTGATATGGACCAT 58.773 33.333 12.67 12.67 0.00 3.55
361 406 8.641498 ATGTTTTGGATATCTTGATATGGACC 57.359 34.615 7.75 4.45 0.00 4.46
428 1535 3.094484 AGTACTCCCTCAGTCCTTCAG 57.906 52.381 0.00 0.00 36.43 3.02
429 1536 3.432378 GAAGTACTCCCTCAGTCCTTCA 58.568 50.000 0.00 0.00 44.09 3.02
432 1539 1.341187 CGGAAGTACTCCCTCAGTCCT 60.341 57.143 0.00 0.00 41.87 3.85
437 1544 2.314071 TTTCCGGAAGTACTCCCTCA 57.686 50.000 17.97 0.00 41.87 3.86
498 1605 2.692709 TTGCCCCTTTCCAATGAGAA 57.307 45.000 0.00 0.00 0.00 2.87
607 2483 3.015312 GCTGGTAGGTGGGGTCGAC 62.015 68.421 7.13 7.13 0.00 4.20
632 2508 3.151022 GGGGTGCGAGGAGAGGAG 61.151 72.222 0.00 0.00 0.00 3.69
635 2511 3.827898 GACGGGGTGCGAGGAGAG 61.828 72.222 0.00 0.00 0.00 3.20
643 2519 2.046700 TGGATTTCGACGGGGTGC 60.047 61.111 0.00 0.00 0.00 5.01
645 2521 0.464452 GATCTGGATTTCGACGGGGT 59.536 55.000 0.00 0.00 0.00 4.95
1409 3287 2.765807 AGCCAGATCCTCCACCGG 60.766 66.667 0.00 0.00 0.00 5.28
1465 3343 2.508663 GCACGGAACCCTAGCGAC 60.509 66.667 0.00 0.00 0.00 5.19
1735 3619 1.647545 AATGCACCGCGAGTTCCATG 61.648 55.000 8.23 0.00 0.00 3.66
1813 3697 8.728088 AAAACAAACGTCAGATTAATAGCAAG 57.272 30.769 0.00 0.00 0.00 4.01
1840 3724 1.293498 GCGTTGAGCTGAGGGAAGA 59.707 57.895 0.00 0.00 44.04 2.87
1841 3725 3.367572 TCTGCGTTGAGCTGAGGGAAG 62.368 57.143 0.00 0.00 46.65 3.46
1843 3727 1.908299 TCTGCGTTGAGCTGAGGGA 60.908 57.895 0.00 0.00 46.65 4.20
1844 3728 2.659016 TCTGCGTTGAGCTGAGGG 59.341 61.111 0.00 0.00 46.65 4.30
1961 3845 7.750229 AACTGCTATGATGAACTTTCAAGAA 57.250 32.000 0.00 0.00 41.13 2.52
1973 3857 5.008019 AGCAAACCGATAAACTGCTATGATG 59.992 40.000 0.00 0.00 41.43 3.07
2062 3948 7.871853 ACAGACAGTGAAAATAACCACATTAC 58.128 34.615 0.00 0.00 35.84 1.89
2086 3972 1.807142 GGAGTAGCCAGAGCAACAAAC 59.193 52.381 0.00 0.00 43.56 2.93
2087 3973 1.699634 AGGAGTAGCCAGAGCAACAAA 59.300 47.619 0.00 0.00 43.56 2.83
2088 3974 1.352083 AGGAGTAGCCAGAGCAACAA 58.648 50.000 0.00 0.00 43.56 2.83
2129 4015 3.443045 AGCTTGCGGGCCATTTCG 61.443 61.111 4.39 0.00 0.00 3.46
2498 4384 4.260670 CGTACAACTTATACAACATGCGC 58.739 43.478 0.00 0.00 0.00 6.09
2702 4589 2.552093 TCCCCTAAAGTCTCTCCAGG 57.448 55.000 0.00 0.00 0.00 4.45
2824 4802 1.066858 ACTCGGTGATGATGGTGTGTC 60.067 52.381 0.00 0.00 0.00 3.67
3551 5666 3.244215 TGACAGGTTCATCAACAGACTCC 60.244 47.826 0.00 0.00 33.70 3.85
3670 5785 9.351572 ACACTAAATCCATAATACCCATAGGAT 57.648 33.333 0.00 0.00 37.46 3.24
4039 6157 1.229131 TATGGGACGGAGGGAGTACT 58.771 55.000 0.00 0.00 0.00 2.73
4040 6158 2.077687 TTATGGGACGGAGGGAGTAC 57.922 55.000 0.00 0.00 0.00 2.73
4041 6159 4.687262 ATATTATGGGACGGAGGGAGTA 57.313 45.455 0.00 0.00 0.00 2.59
4042 6160 3.562108 ATATTATGGGACGGAGGGAGT 57.438 47.619 0.00 0.00 0.00 3.85
4043 6161 5.269991 TCTTATATTATGGGACGGAGGGAG 58.730 45.833 0.00 0.00 0.00 4.30
4044 6162 5.269991 CTCTTATATTATGGGACGGAGGGA 58.730 45.833 0.00 0.00 0.00 4.20
4045 6163 4.141914 GCTCTTATATTATGGGACGGAGGG 60.142 50.000 0.00 0.00 0.00 4.30
4046 6164 4.440250 CGCTCTTATATTATGGGACGGAGG 60.440 50.000 0.00 0.00 0.00 4.30
4047 6165 4.158025 ACGCTCTTATATTATGGGACGGAG 59.842 45.833 0.00 0.00 0.00 4.63
4048 6166 4.084287 ACGCTCTTATATTATGGGACGGA 58.916 43.478 0.00 0.00 0.00 4.69
4049 6167 4.451629 ACGCTCTTATATTATGGGACGG 57.548 45.455 0.00 0.00 0.00 4.79
4050 6168 6.780706 AAAACGCTCTTATATTATGGGACG 57.219 37.500 0.00 0.00 0.00 4.79
4073 6191 8.702438 GCGTTTTTGACACTAGTGTAGTATAAA 58.298 33.333 27.98 19.02 45.05 1.40
4074 6192 8.084073 AGCGTTTTTGACACTAGTGTAGTATAA 58.916 33.333 27.98 15.22 45.05 0.98
4075 6193 7.596494 AGCGTTTTTGACACTAGTGTAGTATA 58.404 34.615 27.98 11.38 45.05 1.47
4076 6194 6.453092 AGCGTTTTTGACACTAGTGTAGTAT 58.547 36.000 27.98 5.50 45.05 2.12
4077 6195 5.835257 AGCGTTTTTGACACTAGTGTAGTA 58.165 37.500 27.98 14.71 45.05 1.82
4078 6196 4.690122 AGCGTTTTTGACACTAGTGTAGT 58.310 39.130 27.98 6.32 45.05 2.73
4079 6197 4.982916 AGAGCGTTTTTGACACTAGTGTAG 59.017 41.667 27.98 13.76 45.05 2.74
4080 6198 4.940463 AGAGCGTTTTTGACACTAGTGTA 58.060 39.130 27.98 11.50 45.05 2.90
4082 6200 4.795970 AAGAGCGTTTTTGACACTAGTG 57.204 40.909 21.44 21.44 0.00 2.74
4083 6201 5.989777 ACATAAGAGCGTTTTTGACACTAGT 59.010 36.000 0.00 0.00 0.00 2.57
4084 6202 6.467723 ACATAAGAGCGTTTTTGACACTAG 57.532 37.500 0.00 0.00 0.00 2.57
4085 6203 6.854496 AACATAAGAGCGTTTTTGACACTA 57.146 33.333 1.95 0.00 0.00 2.74
4086 6204 5.751243 AACATAAGAGCGTTTTTGACACT 57.249 34.783 1.95 0.00 0.00 3.55
4087 6205 6.523201 CCATAACATAAGAGCGTTTTTGACAC 59.477 38.462 0.00 0.00 0.00 3.67
4088 6206 6.348950 CCCATAACATAAGAGCGTTTTTGACA 60.349 38.462 0.00 0.00 0.00 3.58
4089 6207 6.027749 CCCATAACATAAGAGCGTTTTTGAC 58.972 40.000 0.00 0.00 0.00 3.18
4090 6208 5.941058 TCCCATAACATAAGAGCGTTTTTGA 59.059 36.000 0.00 0.00 0.00 2.69
4091 6209 6.027749 GTCCCATAACATAAGAGCGTTTTTG 58.972 40.000 0.00 0.00 0.00 2.44
4092 6210 5.163794 CGTCCCATAACATAAGAGCGTTTTT 60.164 40.000 0.00 0.00 0.00 1.94
4093 6211 4.331717 CGTCCCATAACATAAGAGCGTTTT 59.668 41.667 0.00 0.00 0.00 2.43
4094 6212 3.869246 CGTCCCATAACATAAGAGCGTTT 59.131 43.478 0.00 0.00 0.00 3.60
4095 6213 3.454375 CGTCCCATAACATAAGAGCGTT 58.546 45.455 0.00 0.00 0.00 4.84
4096 6214 2.223971 CCGTCCCATAACATAAGAGCGT 60.224 50.000 0.00 0.00 0.00 5.07
4097 6215 2.035449 TCCGTCCCATAACATAAGAGCG 59.965 50.000 0.00 0.00 0.00 5.03
4098 6216 3.555168 CCTCCGTCCCATAACATAAGAGC 60.555 52.174 0.00 0.00 0.00 4.09
4099 6217 3.006967 CCCTCCGTCCCATAACATAAGAG 59.993 52.174 0.00 0.00 0.00 2.85
4100 6218 2.969950 CCCTCCGTCCCATAACATAAGA 59.030 50.000 0.00 0.00 0.00 2.10
4101 6219 2.969950 TCCCTCCGTCCCATAACATAAG 59.030 50.000 0.00 0.00 0.00 1.73
4102 6220 2.969950 CTCCCTCCGTCCCATAACATAA 59.030 50.000 0.00 0.00 0.00 1.90
4103 6221 2.090943 ACTCCCTCCGTCCCATAACATA 60.091 50.000 0.00 0.00 0.00 2.29
4104 6222 1.344087 ACTCCCTCCGTCCCATAACAT 60.344 52.381 0.00 0.00 0.00 2.71
4105 6223 0.042131 ACTCCCTCCGTCCCATAACA 59.958 55.000 0.00 0.00 0.00 2.41
4106 6224 1.962100 CTACTCCCTCCGTCCCATAAC 59.038 57.143 0.00 0.00 0.00 1.89
4107 6225 1.572415 ACTACTCCCTCCGTCCCATAA 59.428 52.381 0.00 0.00 0.00 1.90
4108 6226 1.229131 ACTACTCCCTCCGTCCCATA 58.771 55.000 0.00 0.00 0.00 2.74
4109 6227 0.338814 AACTACTCCCTCCGTCCCAT 59.661 55.000 0.00 0.00 0.00 4.00
4110 6228 1.002069 TAACTACTCCCTCCGTCCCA 58.998 55.000 0.00 0.00 0.00 4.37
4111 6229 2.030371 CTTAACTACTCCCTCCGTCCC 58.970 57.143 0.00 0.00 0.00 4.46
4112 6230 3.010200 TCTTAACTACTCCCTCCGTCC 57.990 52.381 0.00 0.00 0.00 4.79
4113 6231 4.202131 CCATTCTTAACTACTCCCTCCGTC 60.202 50.000 0.00 0.00 0.00 4.79
4114 6232 3.705072 CCATTCTTAACTACTCCCTCCGT 59.295 47.826 0.00 0.00 0.00 4.69
4115 6233 3.705072 ACCATTCTTAACTACTCCCTCCG 59.295 47.826 0.00 0.00 0.00 4.63
4116 6234 5.898397 ACTACCATTCTTAACTACTCCCTCC 59.102 44.000 0.00 0.00 0.00 4.30
4117 6235 6.380560 ACACTACCATTCTTAACTACTCCCTC 59.619 42.308 0.00 0.00 0.00 4.30
4118 6236 6.154706 CACACTACCATTCTTAACTACTCCCT 59.845 42.308 0.00 0.00 0.00 4.20
4119 6237 6.070938 ACACACTACCATTCTTAACTACTCCC 60.071 42.308 0.00 0.00 0.00 4.30
4120 6238 6.932947 ACACACTACCATTCTTAACTACTCC 58.067 40.000 0.00 0.00 0.00 3.85
4121 6239 8.189460 CCTACACACTACCATTCTTAACTACTC 58.811 40.741 0.00 0.00 0.00 2.59
4360 6594 2.950309 CAAGGCAAAGATCTCCTCATGG 59.050 50.000 0.00 0.00 0.00 3.66
4669 6903 7.464444 GCAAATAATGATGGAACCGTGAAAATG 60.464 37.037 0.00 0.00 0.00 2.32
5286 7733 8.028938 GCATTGTGATTTTAAAGTGGTAGACAT 58.971 33.333 0.00 0.00 0.00 3.06
5413 7860 6.996509 ACAAGCAATGTTTAACTCAATGGAT 58.003 32.000 0.00 0.00 40.06 3.41
5674 8124 0.183492 AGGAGCAAACCTGTGAAGCA 59.817 50.000 0.00 0.00 39.01 3.91
5758 8208 5.880332 TCAGTACCATATGTTCCAAAAGAGC 59.120 40.000 1.24 0.00 0.00 4.09
6349 8813 1.478105 CAAGCTACAAAAGGATGGGCC 59.522 52.381 0.00 0.00 0.00 5.80
6387 8851 9.619316 GTTACAAATGTGAACAGCAATACAATA 57.381 29.630 0.00 0.00 0.00 1.90
6834 9298 6.985188 TCAGCACAGAAGTAAATATGAACC 57.015 37.500 0.00 0.00 0.00 3.62
7281 9745 7.397476 TGATGATGATGATGATGATGAGAGAGA 59.603 37.037 0.00 0.00 0.00 3.10
7283 9747 7.482169 TGATGATGATGATGATGATGAGAGA 57.518 36.000 0.00 0.00 0.00 3.10
7307 9782 3.941483 CCGAAGCCAATGAGAAGTAACAT 59.059 43.478 0.00 0.00 0.00 2.71
7308 9783 3.007506 TCCGAAGCCAATGAGAAGTAACA 59.992 43.478 0.00 0.00 0.00 2.41
7309 9784 3.596214 TCCGAAGCCAATGAGAAGTAAC 58.404 45.455 0.00 0.00 0.00 2.50
7316 9791 6.226787 ACTCTATTATTCCGAAGCCAATGAG 58.773 40.000 0.00 0.00 0.00 2.90
7530 10005 4.651867 CACCCAATGGAGCCTCAG 57.348 61.111 0.00 0.00 34.81 3.35
7720 10195 3.584733 AGGGGCTGGAGTTTTATGATC 57.415 47.619 0.00 0.00 0.00 2.92
7889 10364 1.180456 TGCACATCACCCAAAGGCAG 61.180 55.000 0.00 0.00 36.11 4.85
8002 10478 4.691860 ATGCAATCGTCTCAAGGAAAAG 57.308 40.909 0.00 0.00 0.00 2.27
8004 10480 4.321156 CCAAATGCAATCGTCTCAAGGAAA 60.321 41.667 0.00 0.00 0.00 3.13
8005 10481 3.191162 CCAAATGCAATCGTCTCAAGGAA 59.809 43.478 0.00 0.00 0.00 3.36
8006 10482 2.749076 CCAAATGCAATCGTCTCAAGGA 59.251 45.455 0.00 0.00 0.00 3.36
8007 10483 2.159338 CCCAAATGCAATCGTCTCAAGG 60.159 50.000 0.00 0.00 0.00 3.61
8009 10485 2.789213 TCCCAAATGCAATCGTCTCAA 58.211 42.857 0.00 0.00 0.00 3.02
8010 10486 2.488204 TCCCAAATGCAATCGTCTCA 57.512 45.000 0.00 0.00 0.00 3.27
8013 10489 5.695851 ATCTATTCCCAAATGCAATCGTC 57.304 39.130 0.00 0.00 0.00 4.20
8014 10490 6.293407 CGTAATCTATTCCCAAATGCAATCGT 60.293 38.462 0.00 0.00 0.00 3.73
8015 10491 6.079763 CGTAATCTATTCCCAAATGCAATCG 58.920 40.000 0.00 0.00 0.00 3.34
8016 10492 6.206634 TCCGTAATCTATTCCCAAATGCAATC 59.793 38.462 0.00 0.00 0.00 2.67
8026 10511 7.983484 TGAAACTAACTTCCGTAATCTATTCCC 59.017 37.037 0.00 0.00 0.00 3.97
8039 10524 6.698766 TCTGACTACGTTTGAAACTAACTTCC 59.301 38.462 6.49 0.00 0.00 3.46
8041 10526 6.700520 CCTCTGACTACGTTTGAAACTAACTT 59.299 38.462 6.49 0.00 0.00 2.66
8046 10531 3.391049 GCCTCTGACTACGTTTGAAACT 58.609 45.455 6.49 0.00 0.00 2.66
8086 10578 5.392995 AGCTGACATCAGATGGTAGAGTAT 58.607 41.667 15.13 0.00 46.59 2.12
8109 10601 2.809181 CGCAGCGTCAGTCTTTACA 58.191 52.632 6.65 0.00 0.00 2.41
8123 10615 0.816825 ATGGCATACCTCAAGCGCAG 60.817 55.000 11.47 0.72 36.63 5.18
8126 10618 0.816825 AGCATGGCATACCTCAAGCG 60.817 55.000 0.00 0.00 36.63 4.68
8129 10621 2.368439 GACAAGCATGGCATACCTCAA 58.632 47.619 0.00 0.00 33.41 3.02
8130 10622 1.743431 CGACAAGCATGGCATACCTCA 60.743 52.381 0.00 0.00 32.33 3.86
8131 10623 0.940126 CGACAAGCATGGCATACCTC 59.060 55.000 0.00 0.00 32.33 3.85
8132 10624 0.253044 ACGACAAGCATGGCATACCT 59.747 50.000 0.00 0.00 32.33 3.08
8133 10625 0.657840 GACGACAAGCATGGCATACC 59.342 55.000 0.00 0.00 32.33 2.73
8134 10626 1.368641 TGACGACAAGCATGGCATAC 58.631 50.000 0.00 0.00 32.33 2.39
8135 10627 1.737236 GTTGACGACAAGCATGGCATA 59.263 47.619 0.00 0.00 36.64 3.14
8140 10632 3.363970 GGTAACAGTTGACGACAAGCATG 60.364 47.826 0.00 3.53 36.64 4.06
8157 10649 1.908483 CCCCTCTGGCTCAGGTAAC 59.092 63.158 2.86 0.00 31.51 2.50
8167 10659 0.984230 TTGTTGACTAGCCCCTCTGG 59.016 55.000 0.00 0.00 37.09 3.86
8168 10660 2.237143 TCATTGTTGACTAGCCCCTCTG 59.763 50.000 0.00 0.00 0.00 3.35
8169 10661 2.503356 CTCATTGTTGACTAGCCCCTCT 59.497 50.000 0.00 0.00 0.00 3.69
8170 10662 2.420687 CCTCATTGTTGACTAGCCCCTC 60.421 54.545 0.00 0.00 0.00 4.30
8172 10664 1.408822 CCCTCATTGTTGACTAGCCCC 60.409 57.143 0.00 0.00 0.00 5.80
8198 10702 9.496873 CCAAATATGACCCGTATACAAATTAGA 57.503 33.333 3.32 0.00 0.00 2.10
8225 10729 2.167900 AGTAGACCCCGTAATTGTGAGC 59.832 50.000 0.00 0.00 0.00 4.26
8229 10733 2.726821 TCGAGTAGACCCCGTAATTGT 58.273 47.619 0.00 0.00 0.00 2.71
8234 10738 1.210234 TGACATCGAGTAGACCCCGTA 59.790 52.381 0.00 0.00 0.00 4.02
8237 10741 3.821421 AATTGACATCGAGTAGACCCC 57.179 47.619 0.00 0.00 0.00 4.95
8316 10825 7.202016 TGCCTTGTATAGCTGCAAAATATAC 57.798 36.000 1.02 6.17 34.42 1.47
8365 10874 8.407064 CGTTTCTTCTAGATGTACTACTCCATT 58.593 37.037 5.60 0.00 0.00 3.16
8366 10875 7.468906 GCGTTTCTTCTAGATGTACTACTCCAT 60.469 40.741 5.60 0.00 0.00 3.41
8367 10876 6.183360 GCGTTTCTTCTAGATGTACTACTCCA 60.183 42.308 5.60 0.00 0.00 3.86
8368 10877 6.200808 GCGTTTCTTCTAGATGTACTACTCC 58.799 44.000 5.60 0.00 0.00 3.85
8369 10878 5.902981 CGCGTTTCTTCTAGATGTACTACTC 59.097 44.000 0.00 0.00 0.00 2.59
8370 10879 5.583854 TCGCGTTTCTTCTAGATGTACTACT 59.416 40.000 5.77 0.00 0.00 2.57
8371 10880 5.676310 GTCGCGTTTCTTCTAGATGTACTAC 59.324 44.000 5.77 0.00 0.00 2.73
8372 10881 5.501413 CGTCGCGTTTCTTCTAGATGTACTA 60.501 44.000 5.77 0.00 0.00 1.82
8373 10882 4.660105 GTCGCGTTTCTTCTAGATGTACT 58.340 43.478 5.77 0.00 0.00 2.73
8374 10883 3.477802 CGTCGCGTTTCTTCTAGATGTAC 59.522 47.826 5.77 5.03 0.00 2.90
8375 10884 3.125829 ACGTCGCGTTTCTTCTAGATGTA 59.874 43.478 5.77 0.00 36.35 2.29
8376 10885 2.095364 ACGTCGCGTTTCTTCTAGATGT 60.095 45.455 5.77 0.00 36.35 3.06
8377 10886 2.516923 ACGTCGCGTTTCTTCTAGATG 58.483 47.619 5.77 0.00 36.35 2.90
8378 10887 2.915738 ACGTCGCGTTTCTTCTAGAT 57.084 45.000 5.77 0.00 36.35 1.98
8389 10898 1.663702 CCAAGGAAGAACGTCGCGT 60.664 57.895 5.77 0.00 43.97 6.01
8390 10899 1.615107 GACCAAGGAAGAACGTCGCG 61.615 60.000 0.00 0.00 0.00 5.87
8391 10900 1.615107 CGACCAAGGAAGAACGTCGC 61.615 60.000 0.00 0.00 39.72 5.19
8392 10901 2.431539 CGACCAAGGAAGAACGTCG 58.568 57.895 0.00 0.00 40.15 5.12
8393 10902 1.137513 CACGACCAAGGAAGAACGTC 58.862 55.000 0.00 0.00 31.82 4.34
8394 10903 0.748450 TCACGACCAAGGAAGAACGT 59.252 50.000 0.00 0.00 34.40 3.99
8395 10904 1.269621 ACTCACGACCAAGGAAGAACG 60.270 52.381 0.00 0.00 0.00 3.95
8396 10905 2.528041 ACTCACGACCAAGGAAGAAC 57.472 50.000 0.00 0.00 0.00 3.01
8397 10906 4.884668 ATAACTCACGACCAAGGAAGAA 57.115 40.909 0.00 0.00 0.00 2.52
8398 10907 4.401519 CCTATAACTCACGACCAAGGAAGA 59.598 45.833 0.00 0.00 0.00 2.87
8399 10908 4.441634 CCCTATAACTCACGACCAAGGAAG 60.442 50.000 0.00 0.00 0.00 3.46
8400 10909 3.449737 CCCTATAACTCACGACCAAGGAA 59.550 47.826 0.00 0.00 0.00 3.36
8401 10910 3.028850 CCCTATAACTCACGACCAAGGA 58.971 50.000 0.00 0.00 0.00 3.36
8402 10911 2.483188 GCCCTATAACTCACGACCAAGG 60.483 54.545 0.00 0.00 0.00 3.61
8403 10912 2.798499 CGCCCTATAACTCACGACCAAG 60.798 54.545 0.00 0.00 0.00 3.61
8404 10913 1.135527 CGCCCTATAACTCACGACCAA 59.864 52.381 0.00 0.00 0.00 3.67
8405 10914 0.742505 CGCCCTATAACTCACGACCA 59.257 55.000 0.00 0.00 0.00 4.02
8406 10915 0.743097 ACGCCCTATAACTCACGACC 59.257 55.000 0.00 0.00 0.00 4.79
8407 10916 1.133790 ACACGCCCTATAACTCACGAC 59.866 52.381 0.00 0.00 0.00 4.34
8408 10917 1.466856 ACACGCCCTATAACTCACGA 58.533 50.000 0.00 0.00 0.00 4.35
8409 10918 2.288961 AACACGCCCTATAACTCACG 57.711 50.000 0.00 0.00 0.00 4.35
8410 10919 2.676342 CCAAACACGCCCTATAACTCAC 59.324 50.000 0.00 0.00 0.00 3.51
8411 10920 2.303600 ACCAAACACGCCCTATAACTCA 59.696 45.455 0.00 0.00 0.00 3.41
8412 10921 2.981898 ACCAAACACGCCCTATAACTC 58.018 47.619 0.00 0.00 0.00 3.01
8413 10922 3.078837 CAACCAAACACGCCCTATAACT 58.921 45.455 0.00 0.00 0.00 2.24
8414 10923 2.414957 GCAACCAAACACGCCCTATAAC 60.415 50.000 0.00 0.00 0.00 1.89
8415 10924 1.813786 GCAACCAAACACGCCCTATAA 59.186 47.619 0.00 0.00 0.00 0.98
8416 10925 1.455248 GCAACCAAACACGCCCTATA 58.545 50.000 0.00 0.00 0.00 1.31
8417 10926 1.248101 GGCAACCAAACACGCCCTAT 61.248 55.000 0.00 0.00 38.67 2.57
8418 10927 1.899534 GGCAACCAAACACGCCCTA 60.900 57.895 0.00 0.00 38.67 3.53
8419 10928 3.223589 GGCAACCAAACACGCCCT 61.224 61.111 0.00 0.00 38.67 5.19
8420 10929 4.639171 CGGCAACCAAACACGCCC 62.639 66.667 0.00 0.00 41.71 6.13
8421 10930 3.894947 ACGGCAACCAAACACGCC 61.895 61.111 0.00 0.00 41.30 5.68
8422 10931 2.653766 CACGGCAACCAAACACGC 60.654 61.111 0.00 0.00 0.00 5.34
8423 10932 2.653766 GCACGGCAACCAAACACG 60.654 61.111 0.00 0.00 0.00 4.49
8424 10933 2.653766 CGCACGGCAACCAAACAC 60.654 61.111 0.00 0.00 0.00 3.32
8425 10934 4.560856 GCGCACGGCAACCAAACA 62.561 61.111 0.30 0.00 42.87 2.83
8434 10943 3.479269 GACACTGTAGCGCACGGC 61.479 66.667 11.47 0.00 44.05 5.68
8435 10944 2.809601 GGACACTGTAGCGCACGG 60.810 66.667 11.47 13.51 39.65 4.94
8436 10945 3.172575 CGGACACTGTAGCGCACG 61.173 66.667 11.47 5.37 0.00 5.34
8437 10946 3.479269 GCGGACACTGTAGCGCAC 61.479 66.667 11.47 6.60 0.00 5.34
8438 10947 2.779951 AATGCGGACACTGTAGCGCA 62.780 55.000 11.47 0.00 36.80 6.09
8439 10948 2.100631 AATGCGGACACTGTAGCGC 61.101 57.895 0.00 0.00 0.00 5.92
8440 10949 1.709760 CAATGCGGACACTGTAGCG 59.290 57.895 5.08 0.00 0.00 4.26
8441 10950 1.298157 TGCAATGCGGACACTGTAGC 61.298 55.000 0.00 2.94 0.00 3.58
8442 10951 1.063027 CATGCAATGCGGACACTGTAG 59.937 52.381 0.00 0.00 37.62 2.74
8443 10952 1.085893 CATGCAATGCGGACACTGTA 58.914 50.000 0.00 0.00 37.62 2.74
8444 10953 1.878070 CATGCAATGCGGACACTGT 59.122 52.632 0.00 0.00 37.62 3.55
8445 10954 4.777781 CATGCAATGCGGACACTG 57.222 55.556 0.00 0.00 37.62 3.66
8455 10964 1.180029 GGTGGAGAAGTGCATGCAAT 58.820 50.000 24.58 20.35 0.00 3.56
8456 10965 0.895100 GGGTGGAGAAGTGCATGCAA 60.895 55.000 24.58 0.96 0.00 4.08
8457 10966 1.303561 GGGTGGAGAAGTGCATGCA 60.304 57.895 18.46 18.46 0.00 3.96
8458 10967 0.895100 TTGGGTGGAGAAGTGCATGC 60.895 55.000 11.82 11.82 0.00 4.06
8459 10968 0.883833 GTTGGGTGGAGAAGTGCATG 59.116 55.000 0.00 0.00 0.00 4.06
8460 10969 0.251341 GGTTGGGTGGAGAAGTGCAT 60.251 55.000 0.00 0.00 0.00 3.96
8461 10970 1.150536 GGTTGGGTGGAGAAGTGCA 59.849 57.895 0.00 0.00 0.00 4.57
8462 10971 0.890996 CAGGTTGGGTGGAGAAGTGC 60.891 60.000 0.00 0.00 0.00 4.40
8463 10972 0.250901 CCAGGTTGGGTGGAGAAGTG 60.251 60.000 0.00 0.00 37.23 3.16
8464 10973 0.697854 ACCAGGTTGGGTGGAGAAGT 60.698 55.000 0.00 0.00 43.37 3.01
8465 10974 0.478507 AACCAGGTTGGGTGGAGAAG 59.521 55.000 3.18 0.00 43.37 2.85
8466 10975 1.822425 TAACCAGGTTGGGTGGAGAA 58.178 50.000 15.82 0.00 38.40 2.87
8467 10976 1.633432 CATAACCAGGTTGGGTGGAGA 59.367 52.381 15.82 0.00 38.40 3.71
8468 10977 1.955208 GCATAACCAGGTTGGGTGGAG 60.955 57.143 15.82 0.00 38.40 3.86
8469 10978 0.039035 GCATAACCAGGTTGGGTGGA 59.961 55.000 15.82 0.00 38.40 4.02
8470 10979 0.251564 TGCATAACCAGGTTGGGTGG 60.252 55.000 15.82 0.00 38.40 4.61
8471 10980 1.626686 TTGCATAACCAGGTTGGGTG 58.373 50.000 15.82 11.68 38.40 4.61
8472 10981 2.390225 TTTGCATAACCAGGTTGGGT 57.610 45.000 15.82 0.00 43.37 4.51
8473 10982 2.677613 GCATTTGCATAACCAGGTTGGG 60.678 50.000 15.82 7.84 40.79 4.12
8474 10983 2.620242 GCATTTGCATAACCAGGTTGG 58.380 47.619 15.82 8.20 41.68 3.77
8487 10996 3.865164 GGTACATTTAAGGCTGCATTTGC 59.135 43.478 4.39 0.00 42.50 3.68
8488 10997 5.070770 TGGTACATTTAAGGCTGCATTTG 57.929 39.130 4.39 0.00 0.00 2.32
8505 11014 2.415357 CCAAACAACATGCCGATGGTAC 60.415 50.000 0.00 0.00 33.39 3.34
8506 11015 1.815613 CCAAACAACATGCCGATGGTA 59.184 47.619 0.00 0.00 33.39 3.25
8507 11016 0.602562 CCAAACAACATGCCGATGGT 59.397 50.000 0.00 0.00 33.39 3.55
8508 11017 0.602562 ACCAAACAACATGCCGATGG 59.397 50.000 0.00 0.00 33.39 3.51
8509 11018 1.728825 CGACCAAACAACATGCCGATG 60.729 52.381 0.00 0.00 35.49 3.84
8510 11019 0.521291 CGACCAAACAACATGCCGAT 59.479 50.000 0.00 0.00 0.00 4.18
8511 11020 1.945522 CGACCAAACAACATGCCGA 59.054 52.632 0.00 0.00 0.00 5.54
8512 11021 1.729131 GCGACCAAACAACATGCCG 60.729 57.895 0.00 0.00 0.00 5.69
8513 11022 1.372872 GGCGACCAAACAACATGCC 60.373 57.895 0.00 0.00 0.00 4.40
8514 11023 0.664166 CAGGCGACCAAACAACATGC 60.664 55.000 0.00 0.00 0.00 4.06
8515 11024 0.664166 GCAGGCGACCAAACAACATG 60.664 55.000 0.00 0.00 0.00 3.21
8516 11025 1.106351 TGCAGGCGACCAAACAACAT 61.106 50.000 0.00 0.00 0.00 2.71
8517 11026 1.106351 ATGCAGGCGACCAAACAACA 61.106 50.000 0.00 0.00 0.00 3.33
8518 11027 0.664166 CATGCAGGCGACCAAACAAC 60.664 55.000 0.00 0.00 0.00 3.32
8519 11028 1.659233 CATGCAGGCGACCAAACAA 59.341 52.632 0.00 0.00 0.00 2.83
8520 11029 2.267351 CCATGCAGGCGACCAAACA 61.267 57.895 0.00 0.00 0.00 2.83
8521 11030 2.568090 CCATGCAGGCGACCAAAC 59.432 61.111 0.00 0.00 0.00 2.93
8538 11047 3.145551 CCCATGCAGGCAAGAGGC 61.146 66.667 0.00 0.00 43.74 4.70
8555 11064 1.078848 CCAGGTAGTGTGGCTCTGC 60.079 63.158 0.00 0.00 0.00 4.26
8556 11065 0.036952 CACCAGGTAGTGTGGCTCTG 60.037 60.000 0.00 0.00 38.83 3.35
8557 11066 2.366469 CACCAGGTAGTGTGGCTCT 58.634 57.895 0.00 0.00 38.83 4.09
8564 11073 1.336755 GCAACCAAACACCAGGTAGTG 59.663 52.381 0.00 0.00 43.65 2.74
8565 11074 1.687563 GCAACCAAACACCAGGTAGT 58.312 50.000 0.00 0.00 37.07 2.73
8566 11075 0.958822 GGCAACCAAACACCAGGTAG 59.041 55.000 0.00 0.00 37.07 3.18
8567 11076 0.553819 AGGCAACCAAACACCAGGTA 59.446 50.000 0.00 0.00 37.07 3.08
8568 11077 1.042559 CAGGCAACCAAACACCAGGT 61.043 55.000 0.00 0.00 40.61 4.00
8569 11078 1.741525 CAGGCAACCAAACACCAGG 59.258 57.895 0.00 0.00 37.17 4.45
8570 11079 1.067916 GCAGGCAACCAAACACCAG 59.932 57.895 0.00 0.00 37.17 4.00
8571 11080 1.047596 ATGCAGGCAACCAAACACCA 61.048 50.000 0.00 0.00 37.17 4.17
8572 11081 0.600782 CATGCAGGCAACCAAACACC 60.601 55.000 0.00 0.00 37.17 4.16
8573 11082 0.104671 ACATGCAGGCAACCAAACAC 59.895 50.000 0.00 0.00 37.17 3.32
8574 11083 0.829333 AACATGCAGGCAACCAAACA 59.171 45.000 0.00 0.00 37.17 2.83
8575 11084 2.035832 ACTAACATGCAGGCAACCAAAC 59.964 45.455 0.00 0.00 37.17 2.93
8576 11085 2.035704 CACTAACATGCAGGCAACCAAA 59.964 45.455 0.00 0.00 37.17 3.28
8577 11086 1.612950 CACTAACATGCAGGCAACCAA 59.387 47.619 0.00 0.00 37.17 3.67
8578 11087 1.246649 CACTAACATGCAGGCAACCA 58.753 50.000 0.00 0.00 37.17 3.67
8579 11088 0.527565 CCACTAACATGCAGGCAACC 59.472 55.000 0.00 0.00 37.17 3.77
8580 11089 1.200020 GTCCACTAACATGCAGGCAAC 59.800 52.381 0.00 0.00 0.00 4.17
8581 11090 1.202867 TGTCCACTAACATGCAGGCAA 60.203 47.619 0.00 0.00 0.00 4.52
8582 11091 0.399833 TGTCCACTAACATGCAGGCA 59.600 50.000 0.00 0.00 0.00 4.75
8583 11092 1.533625 TTGTCCACTAACATGCAGGC 58.466 50.000 0.00 0.00 0.00 4.85
8584 11093 2.228822 GGTTTGTCCACTAACATGCAGG 59.771 50.000 0.00 0.00 34.16 4.85
8585 11094 2.228822 GGGTTTGTCCACTAACATGCAG 59.771 50.000 6.41 0.00 38.11 4.41
8586 11095 2.235016 GGGTTTGTCCACTAACATGCA 58.765 47.619 6.41 0.00 38.11 3.96
8587 11096 2.235016 TGGGTTTGTCCACTAACATGC 58.765 47.619 6.41 0.00 38.11 4.06
8588 11097 3.255642 CCTTGGGTTTGTCCACTAACATG 59.744 47.826 6.41 0.00 36.38 3.21
8589 11098 3.496331 CCTTGGGTTTGTCCACTAACAT 58.504 45.455 6.41 0.00 36.38 2.71
8590 11099 2.938838 CCTTGGGTTTGTCCACTAACA 58.061 47.619 6.41 0.00 36.38 2.41
8591 11100 1.611977 GCCTTGGGTTTGTCCACTAAC 59.388 52.381 0.00 0.00 36.38 2.34
8592 11101 1.215673 TGCCTTGGGTTTGTCCACTAA 59.784 47.619 0.00 0.00 36.38 2.24
8593 11102 0.847373 TGCCTTGGGTTTGTCCACTA 59.153 50.000 0.00 0.00 36.38 2.74
8594 11103 0.188342 ATGCCTTGGGTTTGTCCACT 59.812 50.000 0.00 0.00 36.38 4.00
8595 11104 0.318120 CATGCCTTGGGTTTGTCCAC 59.682 55.000 0.00 0.00 36.38 4.02
8596 11105 0.831288 CCATGCCTTGGGTTTGTCCA 60.831 55.000 0.00 0.00 42.33 4.02
8597 11106 1.974543 CCATGCCTTGGGTTTGTCC 59.025 57.895 0.00 0.00 42.33 4.02
8606 11115 3.959535 ATAACCAAACACCATGCCTTG 57.040 42.857 0.00 0.00 0.00 3.61
8607 11116 4.141959 GCATATAACCAAACACCATGCCTT 60.142 41.667 0.00 0.00 33.00 4.35
8608 11117 3.384467 GCATATAACCAAACACCATGCCT 59.616 43.478 0.00 0.00 33.00 4.75
8609 11118 3.131933 TGCATATAACCAAACACCATGCC 59.868 43.478 0.00 0.00 37.17 4.40
8610 11119 4.383850 TGCATATAACCAAACACCATGC 57.616 40.909 0.00 0.00 38.19 4.06


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.