Multiple sequence alignment - TraesCS4D01G222700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G222700 chr4D 100.000 3181 0 0 1 3181 379573236 379576416 0.000000e+00 5875.0
1 TraesCS4D01G222700 chr4B 92.172 2376 94 24 39 2361 466785398 466787734 0.000000e+00 3273.0
2 TraesCS4D01G222700 chr4A 91.743 2192 118 19 73 2232 84898631 84896471 0.000000e+00 2987.0
3 TraesCS4D01G222700 chr4A 90.123 324 21 9 2240 2559 84896155 84895839 8.210000e-111 411.0
4 TraesCS4D01G222700 chr4A 90.909 143 12 1 2871 3012 84879656 84879514 1.160000e-44 191.0
5 TraesCS4D01G222700 chr4A 94.737 76 4 0 3014 3089 84879280 84879205 5.570000e-23 119.0
6 TraesCS4D01G222700 chr6D 79.070 215 41 3 2519 2731 90193055 90193267 9.200000e-31 145.0
7 TraesCS4D01G222700 chr3B 79.389 131 22 4 2573 2701 782746220 782746347 1.570000e-13 87.9
8 TraesCS4D01G222700 chr2B 76.316 152 31 5 91 240 93586559 93586411 3.400000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G222700 chr4D 379573236 379576416 3180 False 5875 5875 100.000 1 3181 1 chr4D.!!$F1 3180
1 TraesCS4D01G222700 chr4B 466785398 466787734 2336 False 3273 3273 92.172 39 2361 1 chr4B.!!$F1 2322
2 TraesCS4D01G222700 chr4A 84895839 84898631 2792 True 1699 2987 90.933 73 2559 2 chr4A.!!$R2 2486

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
694 746 0.250038 ATCCATCCGTCCAATCGCAG 60.25 55.0 0.0 0.0 0.0 5.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2225 2300 0.913205 AGTAGACTCCGAGGCTCTGA 59.087 55.0 7.16 10.8 33.88 3.27 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
49 50 7.617041 AGTTGAGAATATTTTACCACTCAGC 57.383 36.000 0.00 0.00 36.13 4.26
56 57 8.270744 AGAATATTTTACCACTCAGCTGAAGAT 58.729 33.333 18.85 2.66 0.00 2.40
119 124 7.333174 TCACGTTAAATCATGTGTCATATGTGT 59.667 33.333 9.16 0.00 35.48 3.72
154 159 8.158132 TGAGTTTATCCCACTGTTTACATGTTA 58.842 33.333 2.30 0.00 0.00 2.41
164 169 9.607285 CCACTGTTTACATGTTAGTTAATGTTC 57.393 33.333 2.30 0.00 38.05 3.18
177 182 9.543018 GTTAGTTAATGTTCTTCTCCAAATTCG 57.457 33.333 0.00 0.00 0.00 3.34
188 193 6.599244 TCTTCTCCAAATTCGCTACAAATGAT 59.401 34.615 0.00 0.00 0.00 2.45
203 208 7.061094 GCTACAAATGATGAAGTTGTTTAGTGC 59.939 37.037 0.00 0.00 44.34 4.40
221 226 2.853594 GTGCGCATATTTGTCATGTTGG 59.146 45.455 15.91 0.00 0.00 3.77
286 291 1.154197 AGCCGACGTAAAGGAAAAGC 58.846 50.000 8.21 0.00 0.00 3.51
301 306 2.465055 AAAGCGGGCAGGACACTACC 62.465 60.000 0.00 0.00 0.00 3.18
320 325 5.995897 ACTACCTCTGTTATGTTGGTTGTTC 59.004 40.000 0.00 0.00 34.23 3.18
321 326 4.787551 ACCTCTGTTATGTTGGTTGTTCA 58.212 39.130 0.00 0.00 0.00 3.18
322 327 4.821805 ACCTCTGTTATGTTGGTTGTTCAG 59.178 41.667 0.00 0.00 0.00 3.02
324 329 5.049405 CCTCTGTTATGTTGGTTGTTCAGTC 60.049 44.000 0.00 0.00 0.00 3.51
325 330 4.509970 TCTGTTATGTTGGTTGTTCAGTCG 59.490 41.667 0.00 0.00 0.00 4.18
326 331 4.193090 TGTTATGTTGGTTGTTCAGTCGT 58.807 39.130 0.00 0.00 0.00 4.34
327 332 4.636648 TGTTATGTTGGTTGTTCAGTCGTT 59.363 37.500 0.00 0.00 0.00 3.85
373 416 5.579718 TGCGAACGGTTTCAAATTTAAGAA 58.420 33.333 0.00 0.00 0.00 2.52
389 432 7.924358 ATTTAAGAAAAACAAAGTAGGGGGT 57.076 32.000 0.00 0.00 0.00 4.95
493 536 2.978010 GGGTGTTGCACGACAGGG 60.978 66.667 0.00 0.00 34.83 4.45
500 543 3.257933 GCACGACAGGGCTGAAAG 58.742 61.111 0.00 0.00 45.11 2.62
501 544 2.328099 GCACGACAGGGCTGAAAGG 61.328 63.158 0.00 0.00 45.11 3.11
647 695 3.199677 CGGAGTATCTATCCCTCGCTAG 58.800 54.545 0.00 0.00 32.86 3.42
671 719 1.721093 TTCCTTTCCCGGCTTTCCCA 61.721 55.000 0.00 0.00 0.00 4.37
689 741 1.074405 CCATCCATCCATCCGTCCAAT 59.926 52.381 0.00 0.00 0.00 3.16
690 742 2.430465 CATCCATCCATCCGTCCAATC 58.570 52.381 0.00 0.00 0.00 2.67
691 743 0.392706 TCCATCCATCCGTCCAATCG 59.607 55.000 0.00 0.00 0.00 3.34
692 744 1.230635 CCATCCATCCGTCCAATCGC 61.231 60.000 0.00 0.00 0.00 4.58
693 745 0.532640 CATCCATCCGTCCAATCGCA 60.533 55.000 0.00 0.00 0.00 5.10
694 746 0.250038 ATCCATCCGTCCAATCGCAG 60.250 55.000 0.00 0.00 0.00 5.18
1361 1430 0.454600 TGATCGTCTACTTCCACGGC 59.545 55.000 0.00 0.00 36.64 5.68
2094 2169 2.659016 CGAGGAGCAGGCTGTGAA 59.341 61.111 17.16 0.00 0.00 3.18
2224 2299 4.459089 GGACTGACGGGCTGAGGC 62.459 72.222 0.00 0.00 37.82 4.70
2225 2300 3.386237 GACTGACGGGCTGAGGCT 61.386 66.667 5.84 0.00 38.73 4.58
2226 2301 3.363844 GACTGACGGGCTGAGGCTC 62.364 68.421 7.79 7.79 38.73 4.70
2227 2302 3.385384 CTGACGGGCTGAGGCTCA 61.385 66.667 17.68 17.68 39.29 4.26
2228 2303 3.368190 CTGACGGGCTGAGGCTCAG 62.368 68.421 34.76 34.76 46.90 3.35
2258 2649 1.226888 CTACTCCTACGCCGGCAAC 60.227 63.158 28.98 0.00 0.00 4.17
2259 2650 1.664321 CTACTCCTACGCCGGCAACT 61.664 60.000 28.98 10.59 0.00 3.16
2260 2651 0.394216 TACTCCTACGCCGGCAACTA 60.394 55.000 28.98 11.24 0.00 2.24
2261 2652 1.226888 CTCCTACGCCGGCAACTAC 60.227 63.158 28.98 0.00 0.00 2.73
2338 2731 6.838806 CGAATGGATTTTTCACGTTTGTTTTC 59.161 34.615 0.00 0.00 0.00 2.29
2397 2791 3.093278 GGCAACTTGAGATCGCCG 58.907 61.111 0.00 0.00 32.14 6.46
2398 2792 2.401195 GCAACTTGAGATCGCCGC 59.599 61.111 0.00 0.00 0.00 6.53
2410 2804 3.707700 CGCCGCGTGCTTGTTACA 61.708 61.111 15.78 0.00 38.05 2.41
2438 2832 3.477210 AGTTCGTGGAGAAAAAGCTCT 57.523 42.857 0.00 0.00 41.10 4.09
2451 2845 7.805542 GGAGAAAAAGCTCTATCTTGTTTTCAC 59.194 37.037 14.92 10.18 30.28 3.18
2457 2851 4.268884 GCTCTATCTTGTTTTCACGGCTAG 59.731 45.833 0.00 0.00 0.00 3.42
2484 2878 2.772515 CCCCTTCCCTCCTAAACTGTAG 59.227 54.545 0.00 0.00 0.00 2.74
2485 2879 2.772515 CCCTTCCCTCCTAAACTGTAGG 59.227 54.545 0.00 0.00 36.06 3.18
2486 2880 2.170817 CCTTCCCTCCTAAACTGTAGGC 59.829 54.545 0.00 0.00 34.74 3.93
2487 2881 2.634639 TCCCTCCTAAACTGTAGGCA 57.365 50.000 0.00 0.00 34.74 4.75
2488 2882 2.185387 TCCCTCCTAAACTGTAGGCAC 58.815 52.381 0.00 0.00 34.74 5.01
2489 2883 1.134788 CCCTCCTAAACTGTAGGCACG 60.135 57.143 0.00 0.00 34.74 5.34
2490 2884 1.641577 CTCCTAAACTGTAGGCACGC 58.358 55.000 0.00 0.00 34.74 5.34
2493 2887 2.000447 CCTAAACTGTAGGCACGCTTC 59.000 52.381 0.00 0.00 0.00 3.86
2497 2891 2.256117 ACTGTAGGCACGCTTCTTTT 57.744 45.000 0.00 0.00 0.00 2.27
2498 2892 2.143925 ACTGTAGGCACGCTTCTTTTC 58.856 47.619 0.00 0.00 0.00 2.29
2546 2941 2.862541 AGGCATGCTTGACTTTACACA 58.137 42.857 18.92 0.00 38.38 3.72
2547 2942 2.816087 AGGCATGCTTGACTTTACACAG 59.184 45.455 18.92 0.00 38.38 3.66
2548 2943 2.554032 GGCATGCTTGACTTTACACAGT 59.446 45.455 18.92 0.00 0.00 3.55
2549 2944 3.365364 GGCATGCTTGACTTTACACAGTC 60.365 47.826 18.92 0.00 43.23 3.51
2559 2954 6.993079 TGACTTTACACAGTCACTCATACAT 58.007 36.000 0.00 0.00 46.76 2.29
2560 2955 6.868339 TGACTTTACACAGTCACTCATACATG 59.132 38.462 0.00 0.00 46.76 3.21
2561 2956 6.993079 ACTTTACACAGTCACTCATACATGA 58.007 36.000 0.00 0.00 35.16 3.07
2562 2957 6.868864 ACTTTACACAGTCACTCATACATGAC 59.131 38.462 0.00 0.00 44.64 3.06
2571 2966 7.783090 GTCACTCATACATGACTTTGATCAT 57.217 36.000 0.00 0.00 41.69 2.45
2572 2967 8.206325 GTCACTCATACATGACTTTGATCATT 57.794 34.615 0.00 0.00 41.69 2.57
2573 2968 9.317936 GTCACTCATACATGACTTTGATCATTA 57.682 33.333 0.00 0.00 41.69 1.90
2574 2969 9.889128 TCACTCATACATGACTTTGATCATTAA 57.111 29.630 0.00 0.00 37.20 1.40
2670 3065 9.814899 TGTTTCATATGCCTTTATACCAATTTG 57.185 29.630 0.00 0.00 0.00 2.32
2671 3066 9.816354 GTTTCATATGCCTTTATACCAATTTGT 57.184 29.630 0.00 0.00 0.00 2.83
2676 3071 9.860650 ATATGCCTTTATACCAATTTGTAGACA 57.139 29.630 0.00 0.00 0.00 3.41
2677 3072 8.766994 ATGCCTTTATACCAATTTGTAGACAT 57.233 30.769 0.00 0.00 0.00 3.06
2678 3073 9.860650 ATGCCTTTATACCAATTTGTAGACATA 57.139 29.630 0.00 0.00 0.00 2.29
2679 3074 9.116067 TGCCTTTATACCAATTTGTAGACATAC 57.884 33.333 0.00 0.00 0.00 2.39
2680 3075 9.116067 GCCTTTATACCAATTTGTAGACATACA 57.884 33.333 0.00 0.00 40.18 2.29
2704 3099 9.950496 ACAATGAGTGAAAAATATAGTCAGAGT 57.050 29.630 0.00 0.00 0.00 3.24
2708 3103 9.996554 TGAGTGAAAAATATAGTCAGAGTTGAA 57.003 29.630 0.00 0.00 34.49 2.69
2710 3105 8.926710 AGTGAAAAATATAGTCAGAGTTGAACG 58.073 33.333 0.00 0.00 34.49 3.95
2711 3106 8.922676 GTGAAAAATATAGTCAGAGTTGAACGA 58.077 33.333 0.00 0.00 34.49 3.85
2712 3107 9.653287 TGAAAAATATAGTCAGAGTTGAACGAT 57.347 29.630 0.00 0.00 34.49 3.73
2718 3113 9.953697 ATATAGTCAGAGTTGAACGATAAAGAC 57.046 33.333 0.00 0.00 34.49 3.01
2719 3114 5.471257 AGTCAGAGTTGAACGATAAAGACC 58.529 41.667 0.00 0.00 34.49 3.85
2720 3115 4.626172 GTCAGAGTTGAACGATAAAGACCC 59.374 45.833 0.00 0.00 34.49 4.46
2721 3116 4.282449 TCAGAGTTGAACGATAAAGACCCA 59.718 41.667 0.00 0.00 0.00 4.51
2722 3117 4.994852 CAGAGTTGAACGATAAAGACCCAA 59.005 41.667 0.00 0.00 0.00 4.12
2723 3118 5.468746 CAGAGTTGAACGATAAAGACCCAAA 59.531 40.000 0.00 0.00 0.00 3.28
2724 3119 6.017440 CAGAGTTGAACGATAAAGACCCAAAA 60.017 38.462 0.00 0.00 0.00 2.44
2725 3120 6.544564 AGAGTTGAACGATAAAGACCCAAAAA 59.455 34.615 0.00 0.00 0.00 1.94
2726 3121 6.735130 AGTTGAACGATAAAGACCCAAAAAG 58.265 36.000 0.00 0.00 0.00 2.27
2727 3122 6.320418 AGTTGAACGATAAAGACCCAAAAAGT 59.680 34.615 0.00 0.00 0.00 2.66
2728 3123 6.308371 TGAACGATAAAGACCCAAAAAGTC 57.692 37.500 0.00 0.00 34.31 3.01
2729 3124 5.823570 TGAACGATAAAGACCCAAAAAGTCA 59.176 36.000 0.00 0.00 36.68 3.41
2730 3125 6.319152 TGAACGATAAAGACCCAAAAAGTCAA 59.681 34.615 0.00 0.00 36.68 3.18
2731 3126 6.068473 ACGATAAAGACCCAAAAAGTCAAC 57.932 37.500 0.00 0.00 36.68 3.18
2732 3127 5.009310 ACGATAAAGACCCAAAAAGTCAACC 59.991 40.000 0.00 0.00 36.68 3.77
2733 3128 5.240844 CGATAAAGACCCAAAAAGTCAACCT 59.759 40.000 0.00 0.00 36.68 3.50
2734 3129 6.567891 CGATAAAGACCCAAAAAGTCAACCTC 60.568 42.308 0.00 0.00 36.68 3.85
2735 3130 3.662759 AGACCCAAAAAGTCAACCTCA 57.337 42.857 0.00 0.00 36.68 3.86
2736 3131 4.184649 AGACCCAAAAAGTCAACCTCAT 57.815 40.909 0.00 0.00 36.68 2.90
2737 3132 4.145052 AGACCCAAAAAGTCAACCTCATC 58.855 43.478 0.00 0.00 36.68 2.92
2738 3133 4.141158 AGACCCAAAAAGTCAACCTCATCT 60.141 41.667 0.00 0.00 36.68 2.90
2739 3134 4.145052 ACCCAAAAAGTCAACCTCATCTC 58.855 43.478 0.00 0.00 0.00 2.75
2740 3135 3.189287 CCCAAAAAGTCAACCTCATCTCG 59.811 47.826 0.00 0.00 0.00 4.04
2741 3136 3.815401 CCAAAAAGTCAACCTCATCTCGT 59.185 43.478 0.00 0.00 0.00 4.18
2742 3137 4.994852 CCAAAAAGTCAACCTCATCTCGTA 59.005 41.667 0.00 0.00 0.00 3.43
2743 3138 5.643777 CCAAAAAGTCAACCTCATCTCGTAT 59.356 40.000 0.00 0.00 0.00 3.06
2744 3139 6.149474 CCAAAAAGTCAACCTCATCTCGTATT 59.851 38.462 0.00 0.00 0.00 1.89
2745 3140 7.333423 CCAAAAAGTCAACCTCATCTCGTATTA 59.667 37.037 0.00 0.00 0.00 0.98
2746 3141 8.883731 CAAAAAGTCAACCTCATCTCGTATTAT 58.116 33.333 0.00 0.00 0.00 1.28
2747 3142 8.425577 AAAAGTCAACCTCATCTCGTATTATG 57.574 34.615 0.00 0.00 0.00 1.90
2748 3143 5.533482 AGTCAACCTCATCTCGTATTATGC 58.467 41.667 0.00 0.00 0.00 3.14
2749 3144 4.383052 GTCAACCTCATCTCGTATTATGCG 59.617 45.833 0.00 0.00 0.00 4.73
2750 3145 4.277423 TCAACCTCATCTCGTATTATGCGA 59.723 41.667 5.19 5.19 36.85 5.10
2751 3146 4.848562 ACCTCATCTCGTATTATGCGAA 57.151 40.909 6.85 0.00 37.93 4.70
2752 3147 4.547532 ACCTCATCTCGTATTATGCGAAC 58.452 43.478 6.85 0.00 37.93 3.95
2753 3148 4.037565 ACCTCATCTCGTATTATGCGAACA 59.962 41.667 6.85 0.00 37.93 3.18
2754 3149 4.982295 CCTCATCTCGTATTATGCGAACAA 59.018 41.667 6.85 0.00 37.93 2.83
2755 3150 5.117745 CCTCATCTCGTATTATGCGAACAAG 59.882 44.000 6.85 2.79 37.93 3.16
2756 3151 4.982295 TCATCTCGTATTATGCGAACAAGG 59.018 41.667 6.85 0.00 37.93 3.61
2757 3152 3.713288 TCTCGTATTATGCGAACAAGGG 58.287 45.455 6.85 0.00 37.93 3.95
2758 3153 3.382227 TCTCGTATTATGCGAACAAGGGA 59.618 43.478 6.85 0.00 37.93 4.20
2759 3154 4.116961 CTCGTATTATGCGAACAAGGGAA 58.883 43.478 6.85 0.00 37.93 3.97
2760 3155 4.699637 TCGTATTATGCGAACAAGGGAAT 58.300 39.130 2.41 0.00 35.28 3.01
2761 3156 5.845103 TCGTATTATGCGAACAAGGGAATA 58.155 37.500 2.41 0.00 35.28 1.75
2762 3157 6.460781 TCGTATTATGCGAACAAGGGAATAT 58.539 36.000 2.41 0.00 35.28 1.28
2763 3158 6.932400 TCGTATTATGCGAACAAGGGAATATT 59.068 34.615 2.41 0.00 35.28 1.28
2764 3159 7.015289 CGTATTATGCGAACAAGGGAATATTG 58.985 38.462 0.00 0.00 0.00 1.90
2765 3160 6.959639 ATTATGCGAACAAGGGAATATTGT 57.040 33.333 0.00 0.00 42.55 2.71
2766 3161 4.637483 ATGCGAACAAGGGAATATTGTG 57.363 40.909 0.00 0.00 39.91 3.33
2767 3162 3.417101 TGCGAACAAGGGAATATTGTGT 58.583 40.909 0.00 0.00 39.91 3.72
2768 3163 4.580868 TGCGAACAAGGGAATATTGTGTA 58.419 39.130 0.00 0.00 39.91 2.90
2769 3164 5.004448 TGCGAACAAGGGAATATTGTGTAA 58.996 37.500 0.00 0.00 39.91 2.41
2770 3165 5.473846 TGCGAACAAGGGAATATTGTGTAAA 59.526 36.000 0.00 0.00 39.91 2.01
2771 3166 5.798434 GCGAACAAGGGAATATTGTGTAAAC 59.202 40.000 0.00 0.00 39.91 2.01
2772 3167 6.319399 CGAACAAGGGAATATTGTGTAAACC 58.681 40.000 0.00 0.00 39.91 3.27
2773 3168 6.599356 AACAAGGGAATATTGTGTAAACCC 57.401 37.500 0.00 0.00 39.91 4.11
2774 3169 4.703093 ACAAGGGAATATTGTGTAAACCCG 59.297 41.667 0.00 0.00 39.36 5.28
2775 3170 3.284617 AGGGAATATTGTGTAAACCCGC 58.715 45.455 0.00 0.00 40.55 6.13
2776 3171 3.053917 AGGGAATATTGTGTAAACCCGCT 60.054 43.478 0.00 0.00 40.55 5.52
2777 3172 4.164604 AGGGAATATTGTGTAAACCCGCTA 59.835 41.667 0.00 0.00 40.55 4.26
2778 3173 4.883006 GGGAATATTGTGTAAACCCGCTAA 59.117 41.667 0.00 0.00 0.00 3.09
2779 3174 5.533528 GGGAATATTGTGTAAACCCGCTAAT 59.466 40.000 0.00 0.00 0.00 1.73
2780 3175 6.711645 GGGAATATTGTGTAAACCCGCTAATA 59.288 38.462 0.00 0.00 0.00 0.98
2781 3176 7.094933 GGGAATATTGTGTAAACCCGCTAATAG 60.095 40.741 0.00 0.00 0.00 1.73
2782 3177 7.658575 GGAATATTGTGTAAACCCGCTAATAGA 59.341 37.037 0.00 0.00 0.00 1.98
2783 3178 8.967664 AATATTGTGTAAACCCGCTAATAGAA 57.032 30.769 0.00 0.00 0.00 2.10
2784 3179 9.569122 AATATTGTGTAAACCCGCTAATAGAAT 57.431 29.630 0.00 0.00 0.00 2.40
2785 3180 7.875327 ATTGTGTAAACCCGCTAATAGAATT 57.125 32.000 0.00 0.00 0.00 2.17
2786 3181 7.690952 TTGTGTAAACCCGCTAATAGAATTT 57.309 32.000 0.00 0.00 0.00 1.82
2787 3182 7.079182 TGTGTAAACCCGCTAATAGAATTTG 57.921 36.000 0.00 0.00 0.00 2.32
2788 3183 6.879993 TGTGTAAACCCGCTAATAGAATTTGA 59.120 34.615 0.00 0.00 0.00 2.69
2789 3184 7.390996 TGTGTAAACCCGCTAATAGAATTTGAA 59.609 33.333 0.00 0.00 0.00 2.69
2790 3185 7.908601 GTGTAAACCCGCTAATAGAATTTGAAG 59.091 37.037 0.00 0.00 0.00 3.02
2791 3186 5.500645 AACCCGCTAATAGAATTTGAAGC 57.499 39.130 0.00 0.00 0.00 3.86
2792 3187 4.523083 ACCCGCTAATAGAATTTGAAGCA 58.477 39.130 0.00 0.00 0.00 3.91
2793 3188 4.335594 ACCCGCTAATAGAATTTGAAGCAC 59.664 41.667 0.00 0.00 0.00 4.40
2794 3189 4.518217 CCGCTAATAGAATTTGAAGCACG 58.482 43.478 0.00 0.00 0.00 5.34
2795 3190 3.962481 CGCTAATAGAATTTGAAGCACGC 59.038 43.478 0.00 0.00 0.00 5.34
2796 3191 3.962481 GCTAATAGAATTTGAAGCACGCG 59.038 43.478 3.53 3.53 0.00 6.01
2797 3192 4.494199 GCTAATAGAATTTGAAGCACGCGT 60.494 41.667 5.58 5.58 0.00 6.01
2798 3193 2.873170 TAGAATTTGAAGCACGCGTG 57.127 45.000 34.01 34.01 0.00 5.34
2813 3208 4.279043 GTGCTTTGCCCGCCGTTT 62.279 61.111 0.00 0.00 0.00 3.60
2814 3209 3.972276 TGCTTTGCCCGCCGTTTC 61.972 61.111 0.00 0.00 0.00 2.78
2815 3210 3.670377 GCTTTGCCCGCCGTTTCT 61.670 61.111 0.00 0.00 0.00 2.52
2816 3211 2.561373 CTTTGCCCGCCGTTTCTC 59.439 61.111 0.00 0.00 0.00 2.87
2817 3212 3.308878 CTTTGCCCGCCGTTTCTCG 62.309 63.158 0.00 0.00 39.52 4.04
2832 3227 2.589442 TCGCCCGCGAGTGTTTTT 60.589 55.556 8.23 0.00 44.01 1.94
2833 3228 2.426752 CGCCCGCGAGTGTTTTTG 60.427 61.111 8.23 0.00 42.83 2.44
2834 3229 2.729491 GCCCGCGAGTGTTTTTGC 60.729 61.111 8.23 0.00 0.00 3.68
2837 3232 2.426752 CGCGAGTGTTTTTGCGGG 60.427 61.111 0.00 0.00 45.07 6.13
2838 3233 2.719354 GCGAGTGTTTTTGCGGGT 59.281 55.556 0.00 0.00 0.00 5.28
2839 3234 1.065109 GCGAGTGTTTTTGCGGGTT 59.935 52.632 0.00 0.00 0.00 4.11
2840 3235 0.308376 GCGAGTGTTTTTGCGGGTTA 59.692 50.000 0.00 0.00 0.00 2.85
2841 3236 1.068816 GCGAGTGTTTTTGCGGGTTAT 60.069 47.619 0.00 0.00 0.00 1.89
2842 3237 2.606065 GCGAGTGTTTTTGCGGGTTATT 60.606 45.455 0.00 0.00 0.00 1.40
2843 3238 3.231160 CGAGTGTTTTTGCGGGTTATTC 58.769 45.455 0.00 0.00 0.00 1.75
2844 3239 3.571571 GAGTGTTTTTGCGGGTTATTCC 58.428 45.455 0.00 0.00 0.00 3.01
2845 3240 2.959707 AGTGTTTTTGCGGGTTATTCCA 59.040 40.909 0.00 0.00 38.11 3.53
2846 3241 3.385111 AGTGTTTTTGCGGGTTATTCCAA 59.615 39.130 0.00 0.00 38.11 3.53
2847 3242 4.039852 AGTGTTTTTGCGGGTTATTCCAAT 59.960 37.500 0.00 0.00 38.11 3.16
2848 3243 4.752604 GTGTTTTTGCGGGTTATTCCAATT 59.247 37.500 0.00 0.00 38.11 2.32
2849 3244 5.927115 GTGTTTTTGCGGGTTATTCCAATTA 59.073 36.000 0.00 0.00 38.11 1.40
2850 3245 6.090223 GTGTTTTTGCGGGTTATTCCAATTAG 59.910 38.462 0.00 0.00 38.11 1.73
2851 3246 6.015350 TGTTTTTGCGGGTTATTCCAATTAGA 60.015 34.615 0.00 0.00 38.11 2.10
2852 3247 5.828299 TTTGCGGGTTATTCCAATTAGAG 57.172 39.130 0.00 0.00 38.11 2.43
2853 3248 4.764050 TGCGGGTTATTCCAATTAGAGA 57.236 40.909 0.00 0.00 38.11 3.10
2854 3249 5.304686 TGCGGGTTATTCCAATTAGAGAT 57.695 39.130 0.00 0.00 38.11 2.75
2855 3250 5.305585 TGCGGGTTATTCCAATTAGAGATC 58.694 41.667 0.00 0.00 38.11 2.75
2856 3251 5.163248 TGCGGGTTATTCCAATTAGAGATCA 60.163 40.000 0.00 0.00 38.11 2.92
2857 3252 5.763204 GCGGGTTATTCCAATTAGAGATCAA 59.237 40.000 0.00 0.00 38.11 2.57
2858 3253 6.293462 GCGGGTTATTCCAATTAGAGATCAAC 60.293 42.308 0.00 0.00 38.11 3.18
2859 3254 6.765989 CGGGTTATTCCAATTAGAGATCAACA 59.234 38.462 0.00 0.00 38.11 3.33
2860 3255 7.254795 CGGGTTATTCCAATTAGAGATCAACAC 60.255 40.741 0.00 0.00 38.11 3.32
2861 3256 7.775561 GGGTTATTCCAATTAGAGATCAACACT 59.224 37.037 0.00 0.00 38.11 3.55
2862 3257 9.178758 GGTTATTCCAATTAGAGATCAACACTT 57.821 33.333 0.00 0.00 35.97 3.16
2867 3262 9.567776 TTCCAATTAGAGATCAACACTTTTACA 57.432 29.630 0.00 0.00 0.00 2.41
2868 3263 9.739276 TCCAATTAGAGATCAACACTTTTACAT 57.261 29.630 0.00 0.00 0.00 2.29
2894 3289 6.927294 AAAAATGAAGAGTCGAACTGAACT 57.073 33.333 0.00 0.00 0.00 3.01
2895 3290 5.914085 AAATGAAGAGTCGAACTGAACTG 57.086 39.130 0.00 0.00 0.00 3.16
2896 3291 4.855715 ATGAAGAGTCGAACTGAACTGA 57.144 40.909 0.00 0.00 0.00 3.41
2897 3292 4.230314 TGAAGAGTCGAACTGAACTGAG 57.770 45.455 0.00 0.00 0.00 3.35
2898 3293 3.632604 TGAAGAGTCGAACTGAACTGAGT 59.367 43.478 0.00 0.00 0.00 3.41
2899 3294 4.098044 TGAAGAGTCGAACTGAACTGAGTT 59.902 41.667 0.00 0.00 38.94 3.01
2900 3295 3.971150 AGAGTCGAACTGAACTGAGTTG 58.029 45.455 0.90 0.00 36.27 3.16
2901 3296 3.632604 AGAGTCGAACTGAACTGAGTTGA 59.367 43.478 0.90 0.00 36.27 3.18
2902 3297 4.279671 AGAGTCGAACTGAACTGAGTTGAT 59.720 41.667 0.90 0.00 36.27 2.57
2903 3298 4.551388 AGTCGAACTGAACTGAGTTGATC 58.449 43.478 0.90 0.00 36.27 2.92
2904 3299 3.362237 GTCGAACTGAACTGAGTTGATCG 59.638 47.826 0.90 5.80 36.27 3.69
2905 3300 3.252458 TCGAACTGAACTGAGTTGATCGA 59.748 43.478 0.90 8.18 36.27 3.59
2906 3301 4.082733 TCGAACTGAACTGAGTTGATCGAT 60.083 41.667 0.90 0.00 36.27 3.59
2907 3302 5.123344 TCGAACTGAACTGAGTTGATCGATA 59.877 40.000 0.90 0.00 36.27 2.92
2908 3303 5.974158 CGAACTGAACTGAGTTGATCGATAT 59.026 40.000 0.90 0.00 36.27 1.63
2909 3304 6.473778 CGAACTGAACTGAGTTGATCGATATT 59.526 38.462 0.90 0.00 36.27 1.28
2910 3305 7.009631 CGAACTGAACTGAGTTGATCGATATTT 59.990 37.037 0.90 0.00 36.27 1.40
2911 3306 8.553459 AACTGAACTGAGTTGATCGATATTTT 57.447 30.769 0.90 0.00 34.79 1.82
2912 3307 7.968246 ACTGAACTGAGTTGATCGATATTTTG 58.032 34.615 0.90 0.00 0.00 2.44
2913 3308 7.065085 ACTGAACTGAGTTGATCGATATTTTGG 59.935 37.037 0.90 0.00 0.00 3.28
2914 3309 7.102993 TGAACTGAGTTGATCGATATTTTGGA 58.897 34.615 0.90 0.00 0.00 3.53
2915 3310 7.770433 TGAACTGAGTTGATCGATATTTTGGAT 59.230 33.333 0.90 0.00 0.00 3.41
2916 3311 8.511604 AACTGAGTTGATCGATATTTTGGATT 57.488 30.769 0.00 0.00 0.00 3.01
2917 3312 8.147642 ACTGAGTTGATCGATATTTTGGATTC 57.852 34.615 0.00 0.00 0.00 2.52
2918 3313 7.770433 ACTGAGTTGATCGATATTTTGGATTCA 59.230 33.333 0.00 0.00 0.00 2.57
2919 3314 8.681486 TGAGTTGATCGATATTTTGGATTCAT 57.319 30.769 0.00 0.00 0.00 2.57
2920 3315 9.123902 TGAGTTGATCGATATTTTGGATTCATT 57.876 29.630 0.00 0.00 0.00 2.57
2923 3318 9.831737 GTTGATCGATATTTTGGATTCATTAGG 57.168 33.333 0.00 0.00 0.00 2.69
2924 3319 9.573166 TTGATCGATATTTTGGATTCATTAGGT 57.427 29.630 0.00 0.00 0.00 3.08
2925 3320 9.573166 TGATCGATATTTTGGATTCATTAGGTT 57.427 29.630 0.00 0.00 0.00 3.50
2928 3323 8.984764 TCGATATTTTGGATTCATTAGGTTACG 58.015 33.333 0.00 0.00 0.00 3.18
2929 3324 8.984764 CGATATTTTGGATTCATTAGGTTACGA 58.015 33.333 0.00 0.00 0.00 3.43
2932 3327 7.931578 TTTTGGATTCATTAGGTTACGATGT 57.068 32.000 0.00 0.00 0.00 3.06
2933 3328 7.931578 TTTGGATTCATTAGGTTACGATGTT 57.068 32.000 0.00 0.00 0.00 2.71
2934 3329 7.548196 TTGGATTCATTAGGTTACGATGTTC 57.452 36.000 0.00 0.00 0.00 3.18
2935 3330 5.751509 TGGATTCATTAGGTTACGATGTTCG 59.248 40.000 0.00 0.00 46.93 3.95
2936 3331 5.981315 GGATTCATTAGGTTACGATGTTCGA 59.019 40.000 3.62 0.00 43.74 3.71
2937 3332 6.645415 GGATTCATTAGGTTACGATGTTCGAT 59.355 38.462 3.62 0.00 43.74 3.59
2938 3333 6.822073 TTCATTAGGTTACGATGTTCGATG 57.178 37.500 3.62 0.00 43.74 3.84
2939 3334 5.286438 TCATTAGGTTACGATGTTCGATGG 58.714 41.667 3.62 0.00 43.74 3.51
2940 3335 4.724074 TTAGGTTACGATGTTCGATGGT 57.276 40.909 3.62 0.00 43.74 3.55
2941 3336 2.888594 AGGTTACGATGTTCGATGGTG 58.111 47.619 3.62 0.00 43.74 4.17
2942 3337 2.232941 AGGTTACGATGTTCGATGGTGT 59.767 45.455 3.62 0.00 43.74 4.16
2943 3338 2.997986 GGTTACGATGTTCGATGGTGTT 59.002 45.455 3.62 0.00 43.74 3.32
2944 3339 3.434299 GGTTACGATGTTCGATGGTGTTT 59.566 43.478 3.62 0.00 43.74 2.83
2945 3340 4.435121 GGTTACGATGTTCGATGGTGTTTC 60.435 45.833 3.62 0.00 43.74 2.78
2946 3341 2.073816 ACGATGTTCGATGGTGTTTCC 58.926 47.619 3.62 0.00 43.74 3.13
2947 3342 2.549134 ACGATGTTCGATGGTGTTTCCA 60.549 45.455 3.62 0.00 46.32 3.53
2957 3352 3.433306 TGGTGTTTCCATCCCTAGTTG 57.567 47.619 0.00 0.00 41.93 3.16
2958 3353 2.714250 TGGTGTTTCCATCCCTAGTTGT 59.286 45.455 0.00 0.00 41.93 3.32
2959 3354 3.139397 TGGTGTTTCCATCCCTAGTTGTT 59.861 43.478 0.00 0.00 41.93 2.83
2960 3355 4.149598 GGTGTTTCCATCCCTAGTTGTTT 58.850 43.478 0.00 0.00 35.97 2.83
2961 3356 4.022329 GGTGTTTCCATCCCTAGTTGTTTG 60.022 45.833 0.00 0.00 35.97 2.93
2962 3357 4.583073 GTGTTTCCATCCCTAGTTGTTTGT 59.417 41.667 0.00 0.00 0.00 2.83
2963 3358 5.068591 GTGTTTCCATCCCTAGTTGTTTGTT 59.931 40.000 0.00 0.00 0.00 2.83
2964 3359 5.659079 TGTTTCCATCCCTAGTTGTTTGTTT 59.341 36.000 0.00 0.00 0.00 2.83
2965 3360 6.155393 TGTTTCCATCCCTAGTTGTTTGTTTT 59.845 34.615 0.00 0.00 0.00 2.43
2966 3361 6.399639 TTCCATCCCTAGTTGTTTGTTTTC 57.600 37.500 0.00 0.00 0.00 2.29
2967 3362 4.517453 TCCATCCCTAGTTGTTTGTTTTCG 59.483 41.667 0.00 0.00 0.00 3.46
2968 3363 4.320935 CCATCCCTAGTTGTTTGTTTTCGG 60.321 45.833 0.00 0.00 0.00 4.30
2969 3364 3.888583 TCCCTAGTTGTTTGTTTTCGGT 58.111 40.909 0.00 0.00 0.00 4.69
2970 3365 3.628487 TCCCTAGTTGTTTGTTTTCGGTG 59.372 43.478 0.00 0.00 0.00 4.94
2971 3366 3.368495 CCTAGTTGTTTGTTTTCGGTGC 58.632 45.455 0.00 0.00 0.00 5.01
2972 3367 3.181495 CCTAGTTGTTTGTTTTCGGTGCA 60.181 43.478 0.00 0.00 0.00 4.57
2973 3368 3.305398 AGTTGTTTGTTTTCGGTGCAA 57.695 38.095 0.00 0.00 0.00 4.08
2974 3369 2.990514 AGTTGTTTGTTTTCGGTGCAAC 59.009 40.909 0.00 0.00 36.12 4.17
2975 3370 2.724977 TGTTTGTTTTCGGTGCAACA 57.275 40.000 0.98 0.00 39.98 3.33
2976 3371 3.238108 TGTTTGTTTTCGGTGCAACAT 57.762 38.095 0.98 0.00 39.98 2.71
2977 3372 3.589988 TGTTTGTTTTCGGTGCAACATT 58.410 36.364 0.98 0.00 39.98 2.71
2978 3373 4.744570 TGTTTGTTTTCGGTGCAACATTA 58.255 34.783 0.98 0.00 39.98 1.90
2979 3374 4.563184 TGTTTGTTTTCGGTGCAACATTAC 59.437 37.500 0.98 0.00 39.98 1.89
2980 3375 4.640789 TTGTTTTCGGTGCAACATTACT 57.359 36.364 0.98 0.00 39.98 2.24
2981 3376 4.217754 TGTTTTCGGTGCAACATTACTC 57.782 40.909 0.98 0.00 39.98 2.59
2982 3377 3.880490 TGTTTTCGGTGCAACATTACTCT 59.120 39.130 0.98 0.00 39.98 3.24
2983 3378 4.336993 TGTTTTCGGTGCAACATTACTCTT 59.663 37.500 0.98 0.00 39.98 2.85
2984 3379 5.163602 TGTTTTCGGTGCAACATTACTCTTT 60.164 36.000 0.98 0.00 39.98 2.52
2985 3380 6.038382 TGTTTTCGGTGCAACATTACTCTTTA 59.962 34.615 0.98 0.00 39.98 1.85
2986 3381 6.811253 TTTCGGTGCAACATTACTCTTTAT 57.189 33.333 0.98 0.00 39.98 1.40
2987 3382 6.417191 TTCGGTGCAACATTACTCTTTATC 57.583 37.500 0.98 0.00 39.98 1.75
2988 3383 4.873827 TCGGTGCAACATTACTCTTTATCC 59.126 41.667 0.98 0.00 39.98 2.59
2989 3384 4.634004 CGGTGCAACATTACTCTTTATCCA 59.366 41.667 0.98 0.00 39.98 3.41
2990 3385 5.123186 CGGTGCAACATTACTCTTTATCCAA 59.877 40.000 0.98 0.00 39.98 3.53
2991 3386 6.322491 GGTGCAACATTACTCTTTATCCAAC 58.678 40.000 0.00 0.00 39.98 3.77
2992 3387 6.072175 GGTGCAACATTACTCTTTATCCAACA 60.072 38.462 0.00 0.00 39.98 3.33
2993 3388 7.362920 GGTGCAACATTACTCTTTATCCAACAT 60.363 37.037 0.00 0.00 39.98 2.71
2994 3389 8.673711 GTGCAACATTACTCTTTATCCAACATA 58.326 33.333 0.00 0.00 36.32 2.29
2995 3390 9.237187 TGCAACATTACTCTTTATCCAACATAA 57.763 29.630 0.00 0.00 0.00 1.90
2999 3394 8.889717 ACATTACTCTTTATCCAACATAAACCG 58.110 33.333 0.00 0.00 0.00 4.44
3000 3395 7.852971 TTACTCTTTATCCAACATAAACCGG 57.147 36.000 0.00 0.00 0.00 5.28
3001 3396 6.057321 ACTCTTTATCCAACATAAACCGGA 57.943 37.500 9.46 0.00 0.00 5.14
3002 3397 6.659824 ACTCTTTATCCAACATAAACCGGAT 58.340 36.000 9.46 0.00 41.20 4.18
3003 3398 7.116736 ACTCTTTATCCAACATAAACCGGATT 58.883 34.615 9.46 4.89 39.07 3.01
3004 3399 7.067008 ACTCTTTATCCAACATAAACCGGATTG 59.933 37.037 9.46 1.95 39.07 2.67
3005 3400 7.113437 TCTTTATCCAACATAAACCGGATTGA 58.887 34.615 9.46 0.00 39.07 2.57
3006 3401 6.687081 TTATCCAACATAAACCGGATTGAC 57.313 37.500 9.46 0.00 39.07 3.18
3007 3402 3.349022 TCCAACATAAACCGGATTGACC 58.651 45.455 9.46 0.00 0.00 4.02
3008 3403 3.085533 CCAACATAAACCGGATTGACCA 58.914 45.455 9.46 0.00 38.90 4.02
3009 3404 3.699038 CCAACATAAACCGGATTGACCAT 59.301 43.478 9.46 0.00 38.90 3.55
3010 3405 4.159506 CCAACATAAACCGGATTGACCATT 59.840 41.667 9.46 0.00 38.90 3.16
3011 3406 5.358442 CCAACATAAACCGGATTGACCATTA 59.642 40.000 9.46 0.00 38.90 1.90
3012 3407 6.459573 CCAACATAAACCGGATTGACCATTAG 60.460 42.308 9.46 0.00 38.90 1.73
3013 3408 5.996644 ACATAAACCGGATTGACCATTAGA 58.003 37.500 9.46 0.00 38.90 2.10
3014 3409 5.820947 ACATAAACCGGATTGACCATTAGAC 59.179 40.000 9.46 0.00 38.90 2.59
3015 3410 3.277142 AACCGGATTGACCATTAGACC 57.723 47.619 9.46 0.00 38.90 3.85
3016 3411 2.193127 ACCGGATTGACCATTAGACCA 58.807 47.619 9.46 0.00 38.90 4.02
3017 3412 2.777692 ACCGGATTGACCATTAGACCAT 59.222 45.455 9.46 0.00 38.90 3.55
3018 3413 3.971305 ACCGGATTGACCATTAGACCATA 59.029 43.478 9.46 0.00 38.90 2.74
3019 3414 4.597507 ACCGGATTGACCATTAGACCATAT 59.402 41.667 9.46 0.00 38.90 1.78
3020 3415 5.783360 ACCGGATTGACCATTAGACCATATA 59.217 40.000 9.46 0.00 38.90 0.86
3021 3416 6.106673 CCGGATTGACCATTAGACCATATAC 58.893 44.000 0.00 0.00 38.90 1.47
3022 3417 6.295632 CCGGATTGACCATTAGACCATATACA 60.296 42.308 0.00 0.00 38.90 2.29
3023 3418 7.331026 CGGATTGACCATTAGACCATATACAT 58.669 38.462 0.00 0.00 38.90 2.29
3024 3419 7.492669 CGGATTGACCATTAGACCATATACATC 59.507 40.741 0.00 0.00 38.90 3.06
3025 3420 8.321353 GGATTGACCATTAGACCATATACATCA 58.679 37.037 0.00 0.00 38.79 3.07
3026 3421 9.725019 GATTGACCATTAGACCATATACATCAA 57.275 33.333 0.00 0.00 0.00 2.57
3028 3423 9.913310 TTGACCATTAGACCATATACATCAAAA 57.087 29.630 0.00 0.00 0.00 2.44
3066 3461 7.492352 TCTCTAACTTTTCTACTTTGTTGGC 57.508 36.000 0.00 0.00 0.00 4.52
3067 3462 7.051623 TCTCTAACTTTTCTACTTTGTTGGCA 58.948 34.615 0.00 0.00 0.00 4.92
3068 3463 7.226720 TCTCTAACTTTTCTACTTTGTTGGCAG 59.773 37.037 0.00 0.00 0.00 4.85
3069 3464 4.918810 ACTTTTCTACTTTGTTGGCAGG 57.081 40.909 0.00 0.00 0.00 4.85
3070 3465 4.278310 ACTTTTCTACTTTGTTGGCAGGT 58.722 39.130 0.00 0.00 0.00 4.00
3071 3466 4.709886 ACTTTTCTACTTTGTTGGCAGGTT 59.290 37.500 0.00 0.00 0.00 3.50
3072 3467 5.186992 ACTTTTCTACTTTGTTGGCAGGTTT 59.813 36.000 0.00 0.00 0.00 3.27
3073 3468 6.378848 ACTTTTCTACTTTGTTGGCAGGTTTA 59.621 34.615 0.00 0.00 0.00 2.01
3074 3469 6.385649 TTTCTACTTTGTTGGCAGGTTTAG 57.614 37.500 0.00 0.00 0.00 1.85
3075 3470 4.394729 TCTACTTTGTTGGCAGGTTTAGG 58.605 43.478 0.00 0.00 0.00 2.69
3076 3471 3.026707 ACTTTGTTGGCAGGTTTAGGT 57.973 42.857 0.00 0.00 0.00 3.08
3077 3472 4.173290 ACTTTGTTGGCAGGTTTAGGTA 57.827 40.909 0.00 0.00 0.00 3.08
3078 3473 4.736473 ACTTTGTTGGCAGGTTTAGGTAT 58.264 39.130 0.00 0.00 0.00 2.73
3079 3474 4.522789 ACTTTGTTGGCAGGTTTAGGTATG 59.477 41.667 0.00 0.00 0.00 2.39
3080 3475 4.374689 TTGTTGGCAGGTTTAGGTATGA 57.625 40.909 0.00 0.00 0.00 2.15
3081 3476 4.584638 TGTTGGCAGGTTTAGGTATGAT 57.415 40.909 0.00 0.00 0.00 2.45
3082 3477 4.523083 TGTTGGCAGGTTTAGGTATGATC 58.477 43.478 0.00 0.00 0.00 2.92
3083 3478 3.857157 TGGCAGGTTTAGGTATGATCC 57.143 47.619 0.00 0.00 0.00 3.36
3084 3479 3.393687 TGGCAGGTTTAGGTATGATCCT 58.606 45.455 0.00 0.00 41.20 3.24
3085 3480 4.562767 TGGCAGGTTTAGGTATGATCCTA 58.437 43.478 0.00 0.00 38.86 2.94
3086 3481 4.347000 TGGCAGGTTTAGGTATGATCCTAC 59.653 45.833 0.00 0.00 39.46 3.18
3087 3482 4.557205 GCAGGTTTAGGTATGATCCTACG 58.443 47.826 2.55 0.00 39.46 3.51
3088 3483 4.557205 CAGGTTTAGGTATGATCCTACGC 58.443 47.826 2.55 0.00 39.46 4.42
3089 3484 4.281182 CAGGTTTAGGTATGATCCTACGCT 59.719 45.833 2.55 4.04 39.46 5.07
3090 3485 4.523558 AGGTTTAGGTATGATCCTACGCTC 59.476 45.833 2.55 0.00 39.46 5.03
3091 3486 4.280174 GGTTTAGGTATGATCCTACGCTCA 59.720 45.833 2.55 0.00 39.46 4.26
3092 3487 5.047235 GGTTTAGGTATGATCCTACGCTCAT 60.047 44.000 2.55 0.00 39.46 2.90
3093 3488 5.644977 TTAGGTATGATCCTACGCTCATG 57.355 43.478 2.55 0.00 39.46 3.07
3094 3489 3.501349 AGGTATGATCCTACGCTCATGT 58.499 45.455 2.55 0.00 35.87 3.21
3095 3490 4.663334 AGGTATGATCCTACGCTCATGTA 58.337 43.478 2.55 0.00 35.87 2.29
3096 3491 4.459685 AGGTATGATCCTACGCTCATGTAC 59.540 45.833 2.55 0.00 35.87 2.90
3097 3492 3.560902 ATGATCCTACGCTCATGTACG 57.439 47.619 8.27 8.27 31.04 3.67
3098 3493 2.567985 TGATCCTACGCTCATGTACGA 58.432 47.619 15.22 1.27 0.00 3.43
3099 3494 3.146847 TGATCCTACGCTCATGTACGAT 58.853 45.455 15.22 0.72 0.00 3.73
3100 3495 3.058224 TGATCCTACGCTCATGTACGATG 60.058 47.826 15.22 8.05 0.00 3.84
3101 3496 1.001706 TCCTACGCTCATGTACGATGC 60.002 52.381 15.22 1.56 0.00 3.91
3102 3497 1.269051 CCTACGCTCATGTACGATGCA 60.269 52.381 15.22 0.00 0.00 3.96
3103 3498 2.608016 CCTACGCTCATGTACGATGCAT 60.608 50.000 15.22 0.00 0.00 3.96
3104 3499 1.211743 ACGCTCATGTACGATGCATG 58.788 50.000 2.46 0.00 43.55 4.06
3105 3500 0.110956 CGCTCATGTACGATGCATGC 60.111 55.000 11.82 11.82 42.34 4.06
3106 3501 0.236711 GCTCATGTACGATGCATGCC 59.763 55.000 16.68 0.00 42.34 4.40
3107 3502 0.870393 CTCATGTACGATGCATGCCC 59.130 55.000 16.68 6.16 42.34 5.36
3108 3503 0.534877 TCATGTACGATGCATGCCCC 60.535 55.000 16.68 5.76 42.34 5.80
3109 3504 0.818852 CATGTACGATGCATGCCCCA 60.819 55.000 16.68 0.00 37.50 4.96
3110 3505 0.819259 ATGTACGATGCATGCCCCAC 60.819 55.000 16.68 6.64 0.00 4.61
3111 3506 1.451207 GTACGATGCATGCCCCACA 60.451 57.895 16.68 0.00 0.00 4.17
3112 3507 1.451207 TACGATGCATGCCCCACAC 60.451 57.895 16.68 0.00 0.00 3.82
3113 3508 2.190488 TACGATGCATGCCCCACACA 62.190 55.000 16.68 0.00 0.00 3.72
3114 3509 2.341875 CGATGCATGCCCCACACAA 61.342 57.895 16.68 0.00 0.00 3.33
3115 3510 1.216178 GATGCATGCCCCACACAAC 59.784 57.895 16.68 0.00 0.00 3.32
3116 3511 2.229690 GATGCATGCCCCACACAACC 62.230 60.000 16.68 0.00 0.00 3.77
3117 3512 3.694538 GCATGCCCCACACAACCC 61.695 66.667 6.36 0.00 0.00 4.11
3118 3513 2.203611 CATGCCCCACACAACCCA 60.204 61.111 0.00 0.00 0.00 4.51
3119 3514 1.836158 CATGCCCCACACAACCCAA 60.836 57.895 0.00 0.00 0.00 4.12
3120 3515 1.158227 ATGCCCCACACAACCCAAT 59.842 52.632 0.00 0.00 0.00 3.16
3121 3516 0.473501 ATGCCCCACACAACCCAATT 60.474 50.000 0.00 0.00 0.00 2.32
3122 3517 1.118356 TGCCCCACACAACCCAATTC 61.118 55.000 0.00 0.00 0.00 2.17
3123 3518 1.118356 GCCCCACACAACCCAATTCA 61.118 55.000 0.00 0.00 0.00 2.57
3124 3519 0.678950 CCCCACACAACCCAATTCAC 59.321 55.000 0.00 0.00 0.00 3.18
3125 3520 1.703411 CCCACACAACCCAATTCACT 58.297 50.000 0.00 0.00 0.00 3.41
3126 3521 1.613437 CCCACACAACCCAATTCACTC 59.387 52.381 0.00 0.00 0.00 3.51
3127 3522 2.305928 CCACACAACCCAATTCACTCA 58.694 47.619 0.00 0.00 0.00 3.41
3128 3523 2.034558 CCACACAACCCAATTCACTCAC 59.965 50.000 0.00 0.00 0.00 3.51
3129 3524 1.946768 ACACAACCCAATTCACTCACG 59.053 47.619 0.00 0.00 0.00 4.35
3130 3525 0.951558 ACAACCCAATTCACTCACGC 59.048 50.000 0.00 0.00 0.00 5.34
3131 3526 0.240945 CAACCCAATTCACTCACGCC 59.759 55.000 0.00 0.00 0.00 5.68
3132 3527 0.110486 AACCCAATTCACTCACGCCT 59.890 50.000 0.00 0.00 0.00 5.52
3133 3528 0.321653 ACCCAATTCACTCACGCCTC 60.322 55.000 0.00 0.00 0.00 4.70
3134 3529 0.036010 CCCAATTCACTCACGCCTCT 60.036 55.000 0.00 0.00 0.00 3.69
3135 3530 1.363744 CCAATTCACTCACGCCTCTC 58.636 55.000 0.00 0.00 0.00 3.20
3136 3531 1.363744 CAATTCACTCACGCCTCTCC 58.636 55.000 0.00 0.00 0.00 3.71
3137 3532 1.066573 CAATTCACTCACGCCTCTCCT 60.067 52.381 0.00 0.00 0.00 3.69
3138 3533 1.270907 ATTCACTCACGCCTCTCCTT 58.729 50.000 0.00 0.00 0.00 3.36
3139 3534 0.603569 TTCACTCACGCCTCTCCTTC 59.396 55.000 0.00 0.00 0.00 3.46
3140 3535 0.251386 TCACTCACGCCTCTCCTTCT 60.251 55.000 0.00 0.00 0.00 2.85
3141 3536 0.172352 CACTCACGCCTCTCCTTCTC 59.828 60.000 0.00 0.00 0.00 2.87
3142 3537 0.251386 ACTCACGCCTCTCCTTCTCA 60.251 55.000 0.00 0.00 0.00 3.27
3143 3538 0.455410 CTCACGCCTCTCCTTCTCAG 59.545 60.000 0.00 0.00 0.00 3.35
3144 3539 1.153667 CACGCCTCTCCTTCTCAGC 60.154 63.158 0.00 0.00 0.00 4.26
3145 3540 1.607756 ACGCCTCTCCTTCTCAGCA 60.608 57.895 0.00 0.00 0.00 4.41
3146 3541 0.975040 ACGCCTCTCCTTCTCAGCAT 60.975 55.000 0.00 0.00 0.00 3.79
3147 3542 0.530211 CGCCTCTCCTTCTCAGCATG 60.530 60.000 0.00 0.00 37.54 4.06
3149 3544 1.473080 GCCTCTCCTTCTCAGCATGAC 60.473 57.143 0.00 0.00 42.56 3.06
3150 3545 2.109774 CCTCTCCTTCTCAGCATGACT 58.890 52.381 0.00 0.00 42.56 3.41
3151 3546 2.500910 CCTCTCCTTCTCAGCATGACTT 59.499 50.000 0.00 0.00 42.56 3.01
3152 3547 3.430651 CCTCTCCTTCTCAGCATGACTTC 60.431 52.174 0.00 0.00 42.56 3.01
3153 3548 3.439154 TCTCCTTCTCAGCATGACTTCT 58.561 45.455 0.00 0.00 42.56 2.85
3154 3549 3.195182 TCTCCTTCTCAGCATGACTTCTG 59.805 47.826 0.00 0.00 42.56 3.02
3155 3550 2.235650 TCCTTCTCAGCATGACTTCTGG 59.764 50.000 0.00 0.00 42.56 3.86
3156 3551 2.008329 CTTCTCAGCATGACTTCTGGC 58.992 52.381 0.00 0.00 42.56 4.85
3157 3552 0.978907 TCTCAGCATGACTTCTGGCA 59.021 50.000 0.00 0.00 42.56 4.92
3158 3553 1.085091 CTCAGCATGACTTCTGGCAC 58.915 55.000 0.00 0.00 42.56 5.01
3159 3554 0.689055 TCAGCATGACTTCTGGCACT 59.311 50.000 0.00 0.00 42.56 4.40
3160 3555 0.803117 CAGCATGACTTCTGGCACTG 59.197 55.000 0.00 0.00 39.69 3.66
3161 3556 0.959372 AGCATGACTTCTGGCACTGC 60.959 55.000 0.00 0.00 0.00 4.40
3162 3557 0.959372 GCATGACTTCTGGCACTGCT 60.959 55.000 0.00 0.00 0.00 4.24
3163 3558 1.531423 CATGACTTCTGGCACTGCTT 58.469 50.000 0.00 0.00 0.00 3.91
3164 3559 1.884579 CATGACTTCTGGCACTGCTTT 59.115 47.619 0.00 0.00 0.00 3.51
3165 3560 2.057137 TGACTTCTGGCACTGCTTTT 57.943 45.000 0.00 0.00 0.00 2.27
3166 3561 1.949525 TGACTTCTGGCACTGCTTTTC 59.050 47.619 0.00 0.00 0.00 2.29
3167 3562 2.225467 GACTTCTGGCACTGCTTTTCT 58.775 47.619 0.00 0.00 0.00 2.52
3168 3563 2.620585 GACTTCTGGCACTGCTTTTCTT 59.379 45.455 0.00 0.00 0.00 2.52
3169 3564 2.620585 ACTTCTGGCACTGCTTTTCTTC 59.379 45.455 0.00 0.00 0.00 2.87
3170 3565 2.645838 TCTGGCACTGCTTTTCTTCT 57.354 45.000 0.00 0.00 0.00 2.85
3171 3566 2.498167 TCTGGCACTGCTTTTCTTCTC 58.502 47.619 0.00 0.00 0.00 2.87
3172 3567 2.158769 TCTGGCACTGCTTTTCTTCTCA 60.159 45.455 0.00 0.00 0.00 3.27
3173 3568 2.620115 CTGGCACTGCTTTTCTTCTCAA 59.380 45.455 0.00 0.00 0.00 3.02
3174 3569 3.023119 TGGCACTGCTTTTCTTCTCAAA 58.977 40.909 0.00 0.00 0.00 2.69
3175 3570 3.446873 TGGCACTGCTTTTCTTCTCAAAA 59.553 39.130 0.00 0.00 0.00 2.44
3176 3571 4.081752 TGGCACTGCTTTTCTTCTCAAAAA 60.082 37.500 0.00 0.00 0.00 1.94
3177 3572 4.268644 GGCACTGCTTTTCTTCTCAAAAAC 59.731 41.667 0.00 0.00 0.00 2.43
3178 3573 4.864247 GCACTGCTTTTCTTCTCAAAAACA 59.136 37.500 0.00 0.00 0.00 2.83
3179 3574 5.348451 GCACTGCTTTTCTTCTCAAAAACAA 59.652 36.000 0.00 0.00 0.00 2.83
3180 3575 6.670689 GCACTGCTTTTCTTCTCAAAAACAAC 60.671 38.462 0.00 0.00 0.00 3.32
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 9.162764 GCTGAGTGGTAAAATATTCTCAACTTA 57.837 33.333 4.44 0.00 32.76 2.24
24 25 7.885399 AGCTGAGTGGTAAAATATTCTCAACTT 59.115 33.333 4.44 0.00 32.76 2.66
25 26 7.335422 CAGCTGAGTGGTAAAATATTCTCAACT 59.665 37.037 8.42 2.99 32.76 3.16
26 27 7.334421 TCAGCTGAGTGGTAAAATATTCTCAAC 59.666 37.037 13.74 1.13 32.76 3.18
27 28 7.394016 TCAGCTGAGTGGTAAAATATTCTCAA 58.606 34.615 13.74 0.00 32.76 3.02
28 29 6.946340 TCAGCTGAGTGGTAAAATATTCTCA 58.054 36.000 13.74 3.18 0.00 3.27
29 30 7.766278 TCTTCAGCTGAGTGGTAAAATATTCTC 59.234 37.037 17.43 0.00 0.00 2.87
30 31 7.624549 TCTTCAGCTGAGTGGTAAAATATTCT 58.375 34.615 17.43 0.00 0.00 2.40
31 32 7.849804 TCTTCAGCTGAGTGGTAAAATATTC 57.150 36.000 17.43 0.00 0.00 1.75
32 33 8.814038 AATCTTCAGCTGAGTGGTAAAATATT 57.186 30.769 17.43 1.39 0.00 1.28
33 34 8.814038 AAATCTTCAGCTGAGTGGTAAAATAT 57.186 30.769 17.43 0.00 0.00 1.28
34 35 8.635765 AAAATCTTCAGCTGAGTGGTAAAATA 57.364 30.769 17.43 0.00 0.00 1.40
35 36 7.530426 AAAATCTTCAGCTGAGTGGTAAAAT 57.470 32.000 17.43 1.01 0.00 1.82
36 37 6.959639 AAAATCTTCAGCTGAGTGGTAAAA 57.040 33.333 17.43 0.00 0.00 1.52
37 38 6.959639 AAAAATCTTCAGCTGAGTGGTAAA 57.040 33.333 17.43 0.00 0.00 2.01
85 90 8.728088 ACACATGATTTAACGTGAAAAGAATC 57.272 30.769 1.27 0.00 33.56 2.52
89 94 9.773328 ATATGACACATGATTTAACGTGAAAAG 57.227 29.630 1.27 0.00 33.56 2.27
93 98 7.333174 ACACATATGACACATGATTTAACGTGA 59.667 33.333 10.38 0.00 33.56 4.35
119 124 7.001674 ACAGTGGGATAAACTCAAACAACATA 58.998 34.615 0.00 0.00 0.00 2.29
137 142 8.106247 ACATTAACTAACATGTAAACAGTGGG 57.894 34.615 0.00 0.00 31.60 4.61
154 159 6.431234 AGCGAATTTGGAGAAGAACATTAACT 59.569 34.615 0.00 0.00 0.00 2.24
164 169 6.182039 TCATTTGTAGCGAATTTGGAGAAG 57.818 37.500 0.00 0.00 0.00 2.85
166 171 5.879777 TCATCATTTGTAGCGAATTTGGAGA 59.120 36.000 0.00 0.00 0.00 3.71
177 182 7.061094 GCACTAAACAACTTCATCATTTGTAGC 59.939 37.037 0.00 0.00 33.10 3.58
188 193 5.621197 AATATGCGCACTAAACAACTTCA 57.379 34.783 14.90 0.00 0.00 3.02
203 208 4.354071 TCACCAACATGACAAATATGCG 57.646 40.909 0.00 0.00 0.00 4.73
286 291 1.682684 AGAGGTAGTGTCCTGCCCG 60.683 63.158 0.00 0.00 44.01 6.13
301 306 5.333339 CGACTGAACAACCAACATAACAGAG 60.333 44.000 0.00 0.00 0.00 3.35
320 325 4.482386 TCTCGGTCTCAAATTAACGACTG 58.518 43.478 0.00 0.00 34.81 3.51
321 326 4.778534 TCTCGGTCTCAAATTAACGACT 57.221 40.909 0.00 0.00 0.00 4.18
322 327 7.695869 ATTATCTCGGTCTCAAATTAACGAC 57.304 36.000 0.00 0.00 0.00 4.34
327 332 8.708742 CGCATTTATTATCTCGGTCTCAAATTA 58.291 33.333 0.00 0.00 0.00 1.40
350 378 5.171147 TCTTAAATTTGAAACCGTTCGCA 57.829 34.783 0.00 0.00 36.46 5.10
352 380 8.373992 TGTTTTTCTTAAATTTGAAACCGTTCG 58.626 29.630 0.00 0.00 36.46 3.95
373 416 3.204831 TGTACCACCCCCTACTTTGTTTT 59.795 43.478 0.00 0.00 0.00 2.43
382 425 1.700739 CAACAAGTGTACCACCCCCTA 59.299 52.381 0.00 0.00 34.49 3.53
389 432 0.179070 TGCTCGCAACAAGTGTACCA 60.179 50.000 0.00 0.00 0.00 3.25
489 532 0.615331 TACTCTGCCTTTCAGCCCTG 59.385 55.000 0.00 0.00 42.56 4.45
490 533 0.908198 CTACTCTGCCTTTCAGCCCT 59.092 55.000 0.00 0.00 42.56 5.19
491 534 0.746204 GCTACTCTGCCTTTCAGCCC 60.746 60.000 0.00 0.00 42.56 5.19
492 535 0.036010 TGCTACTCTGCCTTTCAGCC 60.036 55.000 0.00 0.00 42.56 4.85
493 536 1.338579 ACTGCTACTCTGCCTTTCAGC 60.339 52.381 0.00 0.00 42.56 4.26
494 537 2.758736 ACTGCTACTCTGCCTTTCAG 57.241 50.000 0.00 0.00 44.21 3.02
495 538 3.614150 CGTTACTGCTACTCTGCCTTTCA 60.614 47.826 0.00 0.00 0.00 2.69
496 539 2.924290 CGTTACTGCTACTCTGCCTTTC 59.076 50.000 0.00 0.00 0.00 2.62
497 540 2.353803 CCGTTACTGCTACTCTGCCTTT 60.354 50.000 0.00 0.00 0.00 3.11
498 541 1.204941 CCGTTACTGCTACTCTGCCTT 59.795 52.381 0.00 0.00 0.00 4.35
499 542 0.818296 CCGTTACTGCTACTCTGCCT 59.182 55.000 0.00 0.00 0.00 4.75
500 543 0.806492 GCCGTTACTGCTACTCTGCC 60.806 60.000 0.00 0.00 0.00 4.85
501 544 0.108804 TGCCGTTACTGCTACTCTGC 60.109 55.000 0.00 0.00 0.00 4.26
502 545 1.630148 GTGCCGTTACTGCTACTCTG 58.370 55.000 0.00 0.00 0.00 3.35
647 695 0.327259 AAGCCGGGAAAGGAACCTAC 59.673 55.000 2.18 0.00 0.00 3.18
671 719 1.002430 CGATTGGACGGATGGATGGAT 59.998 52.381 0.00 0.00 0.00 3.41
691 743 1.221414 GGATTCATACCTGCGACTGC 58.779 55.000 0.00 0.00 43.20 4.40
692 744 1.869754 CGGGATTCATACCTGCGACTG 60.870 57.143 0.00 0.00 0.00 3.51
693 745 0.389391 CGGGATTCATACCTGCGACT 59.611 55.000 0.00 0.00 0.00 4.18
694 746 2.900528 CGGGATTCATACCTGCGAC 58.099 57.895 0.00 0.00 0.00 5.19
957 1020 2.602456 CGAATATATAGCTCGCGCGGAT 60.602 50.000 31.69 21.36 42.32 4.18
1090 1159 2.727392 TACGGGTCCATCGCCCTTG 61.727 63.158 0.00 0.00 43.92 3.61
1091 1160 2.364579 TACGGGTCCATCGCCCTT 60.365 61.111 0.00 0.00 43.92 3.95
1094 1163 1.520787 CTTGTACGGGTCCATCGCC 60.521 63.158 0.00 0.00 0.00 5.54
1159 1228 4.168291 GGAGGAGCTTCGCCTGGG 62.168 72.222 7.69 0.00 32.83 4.45
1865 1934 2.588439 GGGTCCTTCTTACGGCCC 59.412 66.667 0.00 0.00 33.04 5.80
2094 2169 1.279271 CTCCTCTTTTGGATCCACCGT 59.721 52.381 15.91 0.00 42.61 4.83
2224 2299 1.134220 AGTAGACTCCGAGGCTCTGAG 60.134 57.143 27.84 27.84 33.88 3.35
2225 2300 0.913205 AGTAGACTCCGAGGCTCTGA 59.087 55.000 7.16 10.80 33.88 3.27
2226 2301 1.305201 GAGTAGACTCCGAGGCTCTG 58.695 60.000 7.16 6.23 33.88 3.35
2227 2302 3.792712 GAGTAGACTCCGAGGCTCT 57.207 57.895 7.16 4.99 33.88 4.09
2259 2650 5.293814 GCTCGACACTCTACTGATTGTAGTA 59.706 44.000 0.00 0.00 46.50 1.82
2260 2651 4.095185 GCTCGACACTCTACTGATTGTAGT 59.905 45.833 0.00 0.00 46.50 2.73
2397 2791 3.536158 TTCTGATTGTAACAAGCACGC 57.464 42.857 0.00 0.00 0.00 5.34
2398 2792 5.095691 ACTTTCTGATTGTAACAAGCACG 57.904 39.130 0.00 0.00 0.00 5.34
2410 2804 6.693315 TTTTTCTCCACGAACTTTCTGATT 57.307 33.333 0.00 0.00 0.00 2.57
2438 2832 3.682858 GCACTAGCCGTGAAAACAAGATA 59.317 43.478 7.84 0.00 46.81 1.98
2457 2851 4.048470 GGAGGGAAGGGGGTGCAC 62.048 72.222 8.80 8.80 0.00 4.57
2462 2856 0.919710 CAGTTTAGGAGGGAAGGGGG 59.080 60.000 0.00 0.00 0.00 5.40
2484 2878 3.355626 AGAAAAGAAAAGAAGCGTGCC 57.644 42.857 0.00 0.00 0.00 5.01
2485 2879 5.702622 AAAAGAAAAGAAAAGAAGCGTGC 57.297 34.783 0.00 0.00 0.00 5.34
2520 2915 7.339212 TGTGTAAAGTCAAGCATGCCTTATATT 59.661 33.333 15.66 6.33 31.00 1.28
2547 2942 7.783090 ATGATCAAAGTCATGTATGAGTGAC 57.217 36.000 0.00 0.00 43.85 3.67
2548 2943 9.889128 TTAATGATCAAAGTCATGTATGAGTGA 57.111 29.630 0.00 4.63 40.20 3.41
2644 3039 9.814899 CAAATTGGTATAAAGGCATATGAAACA 57.185 29.630 6.97 0.00 0.00 2.83
2645 3040 9.816354 ACAAATTGGTATAAAGGCATATGAAAC 57.184 29.630 6.97 0.00 0.00 2.78
2650 3045 9.860650 TGTCTACAAATTGGTATAAAGGCATAT 57.139 29.630 0.00 0.00 0.00 1.78
2651 3046 9.860650 ATGTCTACAAATTGGTATAAAGGCATA 57.139 29.630 0.00 0.00 0.00 3.14
2652 3047 8.766994 ATGTCTACAAATTGGTATAAAGGCAT 57.233 30.769 0.00 0.00 0.00 4.40
2653 3048 9.116067 GTATGTCTACAAATTGGTATAAAGGCA 57.884 33.333 0.00 0.00 0.00 4.75
2654 3049 9.116067 TGTATGTCTACAAATTGGTATAAAGGC 57.884 33.333 0.00 0.00 34.92 4.35
2678 3073 9.950496 ACTCTGACTATATTTTTCACTCATTGT 57.050 29.630 0.00 0.00 0.00 2.71
2682 3077 9.996554 TTCAACTCTGACTATATTTTTCACTCA 57.003 29.630 0.00 0.00 0.00 3.41
2684 3079 8.926710 CGTTCAACTCTGACTATATTTTTCACT 58.073 33.333 0.00 0.00 0.00 3.41
2685 3080 8.922676 TCGTTCAACTCTGACTATATTTTTCAC 58.077 33.333 0.00 0.00 0.00 3.18
2686 3081 9.653287 ATCGTTCAACTCTGACTATATTTTTCA 57.347 29.630 0.00 0.00 0.00 2.69
2692 3087 9.953697 GTCTTTATCGTTCAACTCTGACTATAT 57.046 33.333 0.00 0.00 0.00 0.86
2693 3088 8.404000 GGTCTTTATCGTTCAACTCTGACTATA 58.596 37.037 0.00 0.00 0.00 1.31
2694 3089 7.259161 GGTCTTTATCGTTCAACTCTGACTAT 58.741 38.462 0.00 0.00 0.00 2.12
2695 3090 6.349944 GGGTCTTTATCGTTCAACTCTGACTA 60.350 42.308 0.00 0.00 0.00 2.59
2696 3091 5.471257 GGTCTTTATCGTTCAACTCTGACT 58.529 41.667 0.00 0.00 0.00 3.41
2697 3092 4.626172 GGGTCTTTATCGTTCAACTCTGAC 59.374 45.833 0.00 0.00 0.00 3.51
2698 3093 4.282449 TGGGTCTTTATCGTTCAACTCTGA 59.718 41.667 0.00 0.00 0.00 3.27
2699 3094 4.566004 TGGGTCTTTATCGTTCAACTCTG 58.434 43.478 0.00 0.00 0.00 3.35
2700 3095 4.884668 TGGGTCTTTATCGTTCAACTCT 57.115 40.909 0.00 0.00 0.00 3.24
2701 3096 5.934935 TTTGGGTCTTTATCGTTCAACTC 57.065 39.130 0.00 0.00 0.00 3.01
2702 3097 6.320418 ACTTTTTGGGTCTTTATCGTTCAACT 59.680 34.615 0.00 0.00 0.00 3.16
2703 3098 6.500910 ACTTTTTGGGTCTTTATCGTTCAAC 58.499 36.000 0.00 0.00 0.00 3.18
2704 3099 6.319152 TGACTTTTTGGGTCTTTATCGTTCAA 59.681 34.615 0.00 0.00 35.04 2.69
2705 3100 5.823570 TGACTTTTTGGGTCTTTATCGTTCA 59.176 36.000 0.00 0.00 35.04 3.18
2706 3101 6.308371 TGACTTTTTGGGTCTTTATCGTTC 57.692 37.500 0.00 0.00 35.04 3.95
2707 3102 6.460537 GGTTGACTTTTTGGGTCTTTATCGTT 60.461 38.462 0.00 0.00 35.04 3.85
2708 3103 5.009310 GGTTGACTTTTTGGGTCTTTATCGT 59.991 40.000 0.00 0.00 35.04 3.73
2709 3104 5.240844 AGGTTGACTTTTTGGGTCTTTATCG 59.759 40.000 0.00 0.00 35.04 2.92
2710 3105 6.264518 TGAGGTTGACTTTTTGGGTCTTTATC 59.735 38.462 0.00 0.00 35.04 1.75
2711 3106 6.133356 TGAGGTTGACTTTTTGGGTCTTTAT 58.867 36.000 0.00 0.00 35.04 1.40
2712 3107 5.511363 TGAGGTTGACTTTTTGGGTCTTTA 58.489 37.500 0.00 0.00 35.04 1.85
2713 3108 4.349365 TGAGGTTGACTTTTTGGGTCTTT 58.651 39.130 0.00 0.00 35.04 2.52
2714 3109 3.976015 TGAGGTTGACTTTTTGGGTCTT 58.024 40.909 0.00 0.00 35.04 3.01
2715 3110 3.662759 TGAGGTTGACTTTTTGGGTCT 57.337 42.857 0.00 0.00 35.04 3.85
2716 3111 4.145052 AGATGAGGTTGACTTTTTGGGTC 58.855 43.478 0.00 0.00 0.00 4.46
2717 3112 4.145052 GAGATGAGGTTGACTTTTTGGGT 58.855 43.478 0.00 0.00 0.00 4.51
2718 3113 3.189287 CGAGATGAGGTTGACTTTTTGGG 59.811 47.826 0.00 0.00 0.00 4.12
2719 3114 3.815401 ACGAGATGAGGTTGACTTTTTGG 59.185 43.478 0.00 0.00 0.00 3.28
2720 3115 6.727824 ATACGAGATGAGGTTGACTTTTTG 57.272 37.500 0.00 0.00 0.00 2.44
2721 3116 8.883731 CATAATACGAGATGAGGTTGACTTTTT 58.116 33.333 0.00 0.00 0.00 1.94
2722 3117 7.011482 GCATAATACGAGATGAGGTTGACTTTT 59.989 37.037 0.00 0.00 0.00 2.27
2723 3118 6.480320 GCATAATACGAGATGAGGTTGACTTT 59.520 38.462 0.00 0.00 0.00 2.66
2724 3119 5.986135 GCATAATACGAGATGAGGTTGACTT 59.014 40.000 0.00 0.00 0.00 3.01
2725 3120 5.533482 GCATAATACGAGATGAGGTTGACT 58.467 41.667 0.00 0.00 0.00 3.41
2726 3121 4.383052 CGCATAATACGAGATGAGGTTGAC 59.617 45.833 0.00 0.00 0.00 3.18
2727 3122 4.277423 TCGCATAATACGAGATGAGGTTGA 59.723 41.667 0.00 0.00 33.96 3.18
2728 3123 4.546570 TCGCATAATACGAGATGAGGTTG 58.453 43.478 0.00 0.00 33.96 3.77
2729 3124 4.848562 TCGCATAATACGAGATGAGGTT 57.151 40.909 0.00 0.00 33.96 3.50
2730 3125 4.037565 TGTTCGCATAATACGAGATGAGGT 59.962 41.667 0.00 0.00 41.18 3.85
2731 3126 4.546570 TGTTCGCATAATACGAGATGAGG 58.453 43.478 0.00 0.00 41.18 3.86
2732 3127 5.117745 CCTTGTTCGCATAATACGAGATGAG 59.882 44.000 0.00 0.00 41.18 2.90
2733 3128 4.982295 CCTTGTTCGCATAATACGAGATGA 59.018 41.667 0.00 0.00 41.18 2.92
2734 3129 4.150627 CCCTTGTTCGCATAATACGAGATG 59.849 45.833 0.00 0.00 41.18 2.90
2735 3130 4.038763 TCCCTTGTTCGCATAATACGAGAT 59.961 41.667 0.00 0.00 41.18 2.75
2736 3131 3.382227 TCCCTTGTTCGCATAATACGAGA 59.618 43.478 0.00 0.00 41.18 4.04
2737 3132 3.713288 TCCCTTGTTCGCATAATACGAG 58.287 45.455 0.00 0.00 41.18 4.18
2738 3133 3.804786 TCCCTTGTTCGCATAATACGA 57.195 42.857 0.00 0.00 37.86 3.43
2739 3134 6.721571 ATATTCCCTTGTTCGCATAATACG 57.278 37.500 0.00 0.00 0.00 3.06
2740 3135 7.803189 CACAATATTCCCTTGTTCGCATAATAC 59.197 37.037 0.00 0.00 34.69 1.89
2741 3136 7.500892 ACACAATATTCCCTTGTTCGCATAATA 59.499 33.333 0.00 0.00 34.69 0.98
2742 3137 6.321181 ACACAATATTCCCTTGTTCGCATAAT 59.679 34.615 0.00 0.00 34.69 1.28
2743 3138 5.650266 ACACAATATTCCCTTGTTCGCATAA 59.350 36.000 0.00 0.00 34.69 1.90
2744 3139 5.189928 ACACAATATTCCCTTGTTCGCATA 58.810 37.500 0.00 0.00 34.69 3.14
2745 3140 4.016444 ACACAATATTCCCTTGTTCGCAT 58.984 39.130 0.00 0.00 34.69 4.73
2746 3141 3.417101 ACACAATATTCCCTTGTTCGCA 58.583 40.909 0.00 0.00 34.69 5.10
2747 3142 5.554822 TTACACAATATTCCCTTGTTCGC 57.445 39.130 0.00 0.00 34.69 4.70
2748 3143 6.319399 GGTTTACACAATATTCCCTTGTTCG 58.681 40.000 0.00 0.00 34.69 3.95
2749 3144 6.624204 CGGGTTTACACAATATTCCCTTGTTC 60.624 42.308 5.00 0.00 34.69 3.18
2750 3145 5.184287 CGGGTTTACACAATATTCCCTTGTT 59.816 40.000 5.00 0.00 34.69 2.83
2751 3146 4.703093 CGGGTTTACACAATATTCCCTTGT 59.297 41.667 5.00 0.84 37.31 3.16
2752 3147 4.439563 GCGGGTTTACACAATATTCCCTTG 60.440 45.833 5.00 0.00 0.00 3.61
2753 3148 3.697542 GCGGGTTTACACAATATTCCCTT 59.302 43.478 5.00 0.00 0.00 3.95
2754 3149 3.053917 AGCGGGTTTACACAATATTCCCT 60.054 43.478 5.00 0.00 0.00 4.20
2755 3150 3.284617 AGCGGGTTTACACAATATTCCC 58.715 45.455 0.00 0.00 0.00 3.97
2756 3151 6.628919 ATTAGCGGGTTTACACAATATTCC 57.371 37.500 0.00 0.00 0.00 3.01
2757 3152 8.597662 TCTATTAGCGGGTTTACACAATATTC 57.402 34.615 0.00 0.00 0.00 1.75
2758 3153 8.967664 TTCTATTAGCGGGTTTACACAATATT 57.032 30.769 0.00 0.00 0.00 1.28
2759 3154 9.569122 AATTCTATTAGCGGGTTTACACAATAT 57.431 29.630 0.00 0.00 0.00 1.28
2760 3155 8.967664 AATTCTATTAGCGGGTTTACACAATA 57.032 30.769 0.00 0.00 0.00 1.90
2761 3156 7.875327 AATTCTATTAGCGGGTTTACACAAT 57.125 32.000 0.00 0.00 0.00 2.71
2762 3157 7.390996 TCAAATTCTATTAGCGGGTTTACACAA 59.609 33.333 0.00 0.00 0.00 3.33
2763 3158 6.879993 TCAAATTCTATTAGCGGGTTTACACA 59.120 34.615 0.00 0.00 0.00 3.72
2764 3159 7.311364 TCAAATTCTATTAGCGGGTTTACAC 57.689 36.000 0.00 0.00 0.00 2.90
2765 3160 7.414762 GCTTCAAATTCTATTAGCGGGTTTACA 60.415 37.037 0.00 0.00 0.00 2.41
2766 3161 6.910972 GCTTCAAATTCTATTAGCGGGTTTAC 59.089 38.462 0.00 0.00 0.00 2.01
2767 3162 6.600032 TGCTTCAAATTCTATTAGCGGGTTTA 59.400 34.615 0.00 0.00 0.00 2.01
2768 3163 5.417580 TGCTTCAAATTCTATTAGCGGGTTT 59.582 36.000 0.00 0.00 0.00 3.27
2769 3164 4.947388 TGCTTCAAATTCTATTAGCGGGTT 59.053 37.500 0.00 0.00 0.00 4.11
2770 3165 4.335594 GTGCTTCAAATTCTATTAGCGGGT 59.664 41.667 0.00 0.00 0.00 5.28
2771 3166 4.552767 CGTGCTTCAAATTCTATTAGCGGG 60.553 45.833 0.00 0.00 0.00 6.13
2772 3167 4.518217 CGTGCTTCAAATTCTATTAGCGG 58.482 43.478 0.00 0.00 0.00 5.52
2773 3168 3.962481 GCGTGCTTCAAATTCTATTAGCG 59.038 43.478 0.00 0.00 0.00 4.26
2774 3169 3.962481 CGCGTGCTTCAAATTCTATTAGC 59.038 43.478 0.00 0.00 0.00 3.09
2775 3170 4.957967 CACGCGTGCTTCAAATTCTATTAG 59.042 41.667 28.16 0.00 0.00 1.73
2776 3171 4.892655 CACGCGTGCTTCAAATTCTATTA 58.107 39.130 28.16 0.00 0.00 0.98
2777 3172 3.747193 CACGCGTGCTTCAAATTCTATT 58.253 40.909 28.16 0.00 0.00 1.73
2778 3173 3.389687 CACGCGTGCTTCAAATTCTAT 57.610 42.857 28.16 0.00 0.00 1.98
2779 3174 2.873170 CACGCGTGCTTCAAATTCTA 57.127 45.000 28.16 0.00 0.00 2.10
2780 3175 3.753774 CACGCGTGCTTCAAATTCT 57.246 47.368 28.16 0.00 0.00 2.40
2796 3191 4.279043 AAACGGCGGGCAAAGCAC 62.279 61.111 13.24 0.00 36.08 4.40
2797 3192 3.972276 GAAACGGCGGGCAAAGCA 61.972 61.111 13.24 0.00 36.08 3.91
2798 3193 3.610791 GAGAAACGGCGGGCAAAGC 62.611 63.158 13.24 0.00 0.00 3.51
2799 3194 2.561373 GAGAAACGGCGGGCAAAG 59.439 61.111 13.24 0.00 0.00 2.77
2800 3195 3.350612 CGAGAAACGGCGGGCAAA 61.351 61.111 13.24 0.00 38.46 3.68
2815 3210 2.589442 AAAAACACTCGCGGGCGA 60.589 55.556 15.55 15.55 46.87 5.54
2816 3211 2.426752 CAAAAACACTCGCGGGCG 60.427 61.111 5.51 6.74 41.35 6.13
2817 3212 2.729491 GCAAAAACACTCGCGGGC 60.729 61.111 5.51 0.00 0.00 6.13
2818 3213 2.426752 CGCAAAAACACTCGCGGG 60.427 61.111 3.27 3.27 43.84 6.13
2820 3215 2.426752 CCCGCAAAAACACTCGCG 60.427 61.111 0.00 0.00 46.96 5.87
2821 3216 0.308376 TAACCCGCAAAAACACTCGC 59.692 50.000 0.00 0.00 0.00 5.03
2822 3217 2.981400 ATAACCCGCAAAAACACTCG 57.019 45.000 0.00 0.00 0.00 4.18
2823 3218 3.004944 TGGAATAACCCGCAAAAACACTC 59.995 43.478 0.00 0.00 38.00 3.51
2824 3219 2.959707 TGGAATAACCCGCAAAAACACT 59.040 40.909 0.00 0.00 38.00 3.55
2825 3220 3.372660 TGGAATAACCCGCAAAAACAC 57.627 42.857 0.00 0.00 38.00 3.32
2826 3221 4.608948 ATTGGAATAACCCGCAAAAACA 57.391 36.364 0.00 0.00 38.00 2.83
2827 3222 6.391537 TCTAATTGGAATAACCCGCAAAAAC 58.608 36.000 0.00 0.00 38.00 2.43
2828 3223 6.434652 TCTCTAATTGGAATAACCCGCAAAAA 59.565 34.615 0.00 0.00 38.00 1.94
2829 3224 5.946972 TCTCTAATTGGAATAACCCGCAAAA 59.053 36.000 0.00 0.00 38.00 2.44
2830 3225 5.502079 TCTCTAATTGGAATAACCCGCAAA 58.498 37.500 0.00 0.00 38.00 3.68
2831 3226 5.105567 TCTCTAATTGGAATAACCCGCAA 57.894 39.130 0.00 0.00 38.00 4.85
2832 3227 4.764050 TCTCTAATTGGAATAACCCGCA 57.236 40.909 0.00 0.00 38.00 5.69
2833 3228 5.305585 TGATCTCTAATTGGAATAACCCGC 58.694 41.667 0.00 0.00 38.00 6.13
2834 3229 6.765989 TGTTGATCTCTAATTGGAATAACCCG 59.234 38.462 0.00 0.00 38.00 5.28
2835 3230 7.775561 AGTGTTGATCTCTAATTGGAATAACCC 59.224 37.037 0.00 0.00 38.00 4.11
2836 3231 8.738645 AGTGTTGATCTCTAATTGGAATAACC 57.261 34.615 0.00 0.00 39.54 2.85
2841 3236 9.567776 TGTAAAAGTGTTGATCTCTAATTGGAA 57.432 29.630 0.00 0.00 0.00 3.53
2842 3237 9.739276 ATGTAAAAGTGTTGATCTCTAATTGGA 57.261 29.630 0.00 0.00 0.00 3.53
2871 3266 6.538742 TCAGTTCAGTTCGACTCTTCATTTTT 59.461 34.615 0.00 0.00 0.00 1.94
2872 3267 6.049149 TCAGTTCAGTTCGACTCTTCATTTT 58.951 36.000 0.00 0.00 0.00 1.82
2873 3268 5.601662 TCAGTTCAGTTCGACTCTTCATTT 58.398 37.500 0.00 0.00 0.00 2.32
2874 3269 5.201713 TCAGTTCAGTTCGACTCTTCATT 57.798 39.130 0.00 0.00 0.00 2.57
2875 3270 4.279671 ACTCAGTTCAGTTCGACTCTTCAT 59.720 41.667 0.00 0.00 0.00 2.57
2876 3271 3.632604 ACTCAGTTCAGTTCGACTCTTCA 59.367 43.478 0.00 0.00 0.00 3.02
2877 3272 4.231718 ACTCAGTTCAGTTCGACTCTTC 57.768 45.455 0.00 0.00 0.00 2.87
2878 3273 4.098044 TCAACTCAGTTCAGTTCGACTCTT 59.902 41.667 0.00 0.00 34.17 2.85
2879 3274 3.632604 TCAACTCAGTTCAGTTCGACTCT 59.367 43.478 0.00 0.00 34.17 3.24
2880 3275 3.966154 TCAACTCAGTTCAGTTCGACTC 58.034 45.455 0.00 0.00 34.17 3.36
2881 3276 4.551388 GATCAACTCAGTTCAGTTCGACT 58.449 43.478 0.00 0.00 34.17 4.18
2882 3277 3.362237 CGATCAACTCAGTTCAGTTCGAC 59.638 47.826 3.38 0.00 34.17 4.20
2883 3278 3.252458 TCGATCAACTCAGTTCAGTTCGA 59.748 43.478 6.86 6.86 34.17 3.71
2884 3279 3.565516 TCGATCAACTCAGTTCAGTTCG 58.434 45.455 0.00 0.00 34.17 3.95
2885 3280 7.763172 AATATCGATCAACTCAGTTCAGTTC 57.237 36.000 0.00 0.00 34.17 3.01
2886 3281 8.446273 CAAAATATCGATCAACTCAGTTCAGTT 58.554 33.333 0.00 0.00 37.05 3.16
2887 3282 7.065085 CCAAAATATCGATCAACTCAGTTCAGT 59.935 37.037 0.00 0.00 0.00 3.41
2888 3283 7.278646 TCCAAAATATCGATCAACTCAGTTCAG 59.721 37.037 0.00 0.00 0.00 3.02
2889 3284 7.102993 TCCAAAATATCGATCAACTCAGTTCA 58.897 34.615 0.00 0.00 0.00 3.18
2890 3285 7.539712 TCCAAAATATCGATCAACTCAGTTC 57.460 36.000 0.00 0.00 0.00 3.01
2891 3286 8.511604 AATCCAAAATATCGATCAACTCAGTT 57.488 30.769 0.00 0.00 0.00 3.16
2892 3287 7.770433 TGAATCCAAAATATCGATCAACTCAGT 59.230 33.333 0.00 0.00 0.00 3.41
2893 3288 8.146479 TGAATCCAAAATATCGATCAACTCAG 57.854 34.615 0.00 0.00 0.00 3.35
2894 3289 8.681486 ATGAATCCAAAATATCGATCAACTCA 57.319 30.769 0.00 0.00 0.00 3.41
2897 3292 9.831737 CCTAATGAATCCAAAATATCGATCAAC 57.168 33.333 0.00 0.00 0.00 3.18
2898 3293 9.573166 ACCTAATGAATCCAAAATATCGATCAA 57.427 29.630 0.00 0.00 0.00 2.57
2899 3294 9.573166 AACCTAATGAATCCAAAATATCGATCA 57.427 29.630 0.00 0.00 0.00 2.92
2902 3297 8.984764 CGTAACCTAATGAATCCAAAATATCGA 58.015 33.333 0.00 0.00 0.00 3.59
2903 3298 8.984764 TCGTAACCTAATGAATCCAAAATATCG 58.015 33.333 0.00 0.00 0.00 2.92
2906 3301 9.621629 ACATCGTAACCTAATGAATCCAAAATA 57.378 29.630 0.00 0.00 0.00 1.40
2907 3302 8.519799 ACATCGTAACCTAATGAATCCAAAAT 57.480 30.769 0.00 0.00 0.00 1.82
2908 3303 7.931578 ACATCGTAACCTAATGAATCCAAAA 57.068 32.000 0.00 0.00 0.00 2.44
2909 3304 7.201574 CGAACATCGTAACCTAATGAATCCAAA 60.202 37.037 0.00 0.00 34.72 3.28
2910 3305 6.256975 CGAACATCGTAACCTAATGAATCCAA 59.743 38.462 0.00 0.00 34.72 3.53
2911 3306 5.751509 CGAACATCGTAACCTAATGAATCCA 59.248 40.000 0.00 0.00 34.72 3.41
2912 3307 5.981315 TCGAACATCGTAACCTAATGAATCC 59.019 40.000 0.00 0.00 41.35 3.01
2913 3308 7.359264 CCATCGAACATCGTAACCTAATGAATC 60.359 40.741 0.00 0.00 41.35 2.52
2914 3309 6.423905 CCATCGAACATCGTAACCTAATGAAT 59.576 38.462 0.00 0.00 41.35 2.57
2915 3310 5.751509 CCATCGAACATCGTAACCTAATGAA 59.248 40.000 0.00 0.00 41.35 2.57
2916 3311 5.163488 ACCATCGAACATCGTAACCTAATGA 60.163 40.000 0.00 0.00 41.35 2.57
2917 3312 5.047847 ACCATCGAACATCGTAACCTAATG 58.952 41.667 0.00 0.00 41.35 1.90
2918 3313 5.047847 CACCATCGAACATCGTAACCTAAT 58.952 41.667 0.00 0.00 41.35 1.73
2919 3314 4.082081 ACACCATCGAACATCGTAACCTAA 60.082 41.667 0.00 0.00 41.35 2.69
2920 3315 3.444742 ACACCATCGAACATCGTAACCTA 59.555 43.478 0.00 0.00 41.35 3.08
2921 3316 2.232941 ACACCATCGAACATCGTAACCT 59.767 45.455 0.00 0.00 41.35 3.50
2922 3317 2.613691 ACACCATCGAACATCGTAACC 58.386 47.619 0.00 0.00 41.35 2.85
2923 3318 4.435121 GGAAACACCATCGAACATCGTAAC 60.435 45.833 0.00 0.00 38.71 2.50
2924 3319 3.680937 GGAAACACCATCGAACATCGTAA 59.319 43.478 0.00 0.00 38.71 3.18
2925 3320 3.255725 GGAAACACCATCGAACATCGTA 58.744 45.455 0.00 0.00 38.71 3.43
2926 3321 2.073816 GGAAACACCATCGAACATCGT 58.926 47.619 0.00 0.00 38.71 3.73
2927 3322 2.073056 TGGAAACACCATCGAACATCG 58.927 47.619 0.00 0.00 44.64 3.84
2941 3336 5.784578 AACAAACAACTAGGGATGGAAAC 57.215 39.130 0.00 0.00 0.00 2.78
2942 3337 6.460399 CGAAAACAAACAACTAGGGATGGAAA 60.460 38.462 0.00 0.00 0.00 3.13
2943 3338 5.009210 CGAAAACAAACAACTAGGGATGGAA 59.991 40.000 0.00 0.00 0.00 3.53
2944 3339 4.517453 CGAAAACAAACAACTAGGGATGGA 59.483 41.667 0.00 0.00 0.00 3.41
2945 3340 4.320935 CCGAAAACAAACAACTAGGGATGG 60.321 45.833 0.00 0.00 0.00 3.51
2946 3341 4.277423 ACCGAAAACAAACAACTAGGGATG 59.723 41.667 0.00 0.00 0.00 3.51
2947 3342 4.277423 CACCGAAAACAAACAACTAGGGAT 59.723 41.667 0.00 0.00 0.00 3.85
2948 3343 3.628487 CACCGAAAACAAACAACTAGGGA 59.372 43.478 0.00 0.00 0.00 4.20
2949 3344 3.794138 GCACCGAAAACAAACAACTAGGG 60.794 47.826 0.00 0.00 0.00 3.53
2950 3345 3.181495 TGCACCGAAAACAAACAACTAGG 60.181 43.478 0.00 0.00 0.00 3.02
2951 3346 4.022464 TGCACCGAAAACAAACAACTAG 57.978 40.909 0.00 0.00 0.00 2.57
2952 3347 4.167268 GTTGCACCGAAAACAAACAACTA 58.833 39.130 0.00 0.00 34.55 2.24
2953 3348 2.990514 GTTGCACCGAAAACAAACAACT 59.009 40.909 0.00 0.00 34.55 3.16
2954 3349 2.731976 TGTTGCACCGAAAACAAACAAC 59.268 40.909 0.00 0.00 37.14 3.32
2955 3350 3.026630 TGTTGCACCGAAAACAAACAA 57.973 38.095 0.00 0.00 33.50 2.83
2956 3351 2.724977 TGTTGCACCGAAAACAAACA 57.275 40.000 0.00 0.00 33.50 2.83
2957 3352 4.801516 AGTAATGTTGCACCGAAAACAAAC 59.198 37.500 0.00 0.00 39.57 2.93
2958 3353 5.000012 AGTAATGTTGCACCGAAAACAAA 58.000 34.783 0.00 0.00 39.57 2.83
2959 3354 4.336993 AGAGTAATGTTGCACCGAAAACAA 59.663 37.500 0.00 0.00 39.57 2.83
2960 3355 3.880490 AGAGTAATGTTGCACCGAAAACA 59.120 39.130 0.00 0.00 40.36 2.83
2961 3356 4.483476 AGAGTAATGTTGCACCGAAAAC 57.517 40.909 0.00 0.00 0.00 2.43
2962 3357 5.508200 AAAGAGTAATGTTGCACCGAAAA 57.492 34.783 0.00 0.00 0.00 2.29
2963 3358 6.128117 GGATAAAGAGTAATGTTGCACCGAAA 60.128 38.462 0.00 0.00 0.00 3.46
2964 3359 5.353123 GGATAAAGAGTAATGTTGCACCGAA 59.647 40.000 0.00 0.00 0.00 4.30
2965 3360 4.873827 GGATAAAGAGTAATGTTGCACCGA 59.126 41.667 0.00 0.00 0.00 4.69
2966 3361 4.634004 TGGATAAAGAGTAATGTTGCACCG 59.366 41.667 0.00 0.00 0.00 4.94
2967 3362 6.072175 TGTTGGATAAAGAGTAATGTTGCACC 60.072 38.462 0.00 0.00 0.00 5.01
2968 3363 6.908825 TGTTGGATAAAGAGTAATGTTGCAC 58.091 36.000 0.00 0.00 0.00 4.57
2969 3364 7.701539 ATGTTGGATAAAGAGTAATGTTGCA 57.298 32.000 0.00 0.00 0.00 4.08
2973 3368 8.889717 CGGTTTATGTTGGATAAAGAGTAATGT 58.110 33.333 0.00 0.00 0.00 2.71
2974 3369 8.342634 CCGGTTTATGTTGGATAAAGAGTAATG 58.657 37.037 0.00 0.00 0.00 1.90
2975 3370 8.269317 TCCGGTTTATGTTGGATAAAGAGTAAT 58.731 33.333 0.00 0.00 0.00 1.89
2976 3371 7.622713 TCCGGTTTATGTTGGATAAAGAGTAA 58.377 34.615 0.00 0.00 0.00 2.24
2977 3372 7.185318 TCCGGTTTATGTTGGATAAAGAGTA 57.815 36.000 0.00 0.00 0.00 2.59
2978 3373 6.057321 TCCGGTTTATGTTGGATAAAGAGT 57.943 37.500 0.00 0.00 0.00 3.24
2979 3374 7.282224 TCAATCCGGTTTATGTTGGATAAAGAG 59.718 37.037 0.00 0.00 40.27 2.85
2980 3375 7.066525 GTCAATCCGGTTTATGTTGGATAAAGA 59.933 37.037 0.00 0.00 40.27 2.52
2981 3376 7.193595 GTCAATCCGGTTTATGTTGGATAAAG 58.806 38.462 0.00 0.00 40.27 1.85
2982 3377 6.095720 GGTCAATCCGGTTTATGTTGGATAAA 59.904 38.462 0.00 0.00 40.27 1.40
2983 3378 5.591067 GGTCAATCCGGTTTATGTTGGATAA 59.409 40.000 0.00 0.00 40.27 1.75
2984 3379 5.127491 GGTCAATCCGGTTTATGTTGGATA 58.873 41.667 0.00 0.00 40.27 2.59
2985 3380 3.951680 GGTCAATCCGGTTTATGTTGGAT 59.048 43.478 0.00 0.00 42.93 3.41
2986 3381 3.244946 TGGTCAATCCGGTTTATGTTGGA 60.245 43.478 0.00 0.00 39.52 3.53
2987 3382 3.085533 TGGTCAATCCGGTTTATGTTGG 58.914 45.455 0.00 0.00 39.52 3.77
2988 3383 4.981806 ATGGTCAATCCGGTTTATGTTG 57.018 40.909 0.00 0.00 39.52 3.33
2989 3384 6.317893 GTCTAATGGTCAATCCGGTTTATGTT 59.682 38.462 0.00 0.00 39.52 2.71
2990 3385 5.820947 GTCTAATGGTCAATCCGGTTTATGT 59.179 40.000 0.00 0.00 39.52 2.29
2991 3386 5.238650 GGTCTAATGGTCAATCCGGTTTATG 59.761 44.000 0.00 0.00 39.52 1.90
2992 3387 5.104277 TGGTCTAATGGTCAATCCGGTTTAT 60.104 40.000 0.00 0.00 39.52 1.40
2993 3388 4.225492 TGGTCTAATGGTCAATCCGGTTTA 59.775 41.667 0.00 0.00 39.52 2.01
2994 3389 3.009695 TGGTCTAATGGTCAATCCGGTTT 59.990 43.478 0.00 0.00 39.52 3.27
2995 3390 2.574369 TGGTCTAATGGTCAATCCGGTT 59.426 45.455 0.00 0.00 39.52 4.44
2996 3391 2.193127 TGGTCTAATGGTCAATCCGGT 58.807 47.619 0.00 0.00 39.52 5.28
2997 3392 3.492102 ATGGTCTAATGGTCAATCCGG 57.508 47.619 0.00 0.00 39.52 5.14
2998 3393 6.697395 TGTATATGGTCTAATGGTCAATCCG 58.303 40.000 0.00 0.00 39.52 4.18
2999 3394 8.321353 TGATGTATATGGTCTAATGGTCAATCC 58.679 37.037 0.00 0.00 0.00 3.01
3000 3395 9.725019 TTGATGTATATGGTCTAATGGTCAATC 57.275 33.333 0.00 0.00 0.00 2.67
3002 3397 9.913310 TTTTGATGTATATGGTCTAATGGTCAA 57.087 29.630 0.00 0.00 0.00 3.18
3040 3435 8.403236 GCCAACAAAGTAGAAAAGTTAGAGAAA 58.597 33.333 0.00 0.00 0.00 2.52
3041 3436 7.554835 TGCCAACAAAGTAGAAAAGTTAGAGAA 59.445 33.333 0.00 0.00 0.00 2.87
3042 3437 7.051623 TGCCAACAAAGTAGAAAAGTTAGAGA 58.948 34.615 0.00 0.00 0.00 3.10
3043 3438 7.259290 TGCCAACAAAGTAGAAAAGTTAGAG 57.741 36.000 0.00 0.00 0.00 2.43
3044 3439 6.262273 CCTGCCAACAAAGTAGAAAAGTTAGA 59.738 38.462 0.00 0.00 0.00 2.10
3045 3440 6.039382 ACCTGCCAACAAAGTAGAAAAGTTAG 59.961 38.462 0.00 0.00 0.00 2.34
3046 3441 5.889289 ACCTGCCAACAAAGTAGAAAAGTTA 59.111 36.000 0.00 0.00 0.00 2.24
3047 3442 4.709886 ACCTGCCAACAAAGTAGAAAAGTT 59.290 37.500 0.00 0.00 0.00 2.66
3048 3443 4.278310 ACCTGCCAACAAAGTAGAAAAGT 58.722 39.130 0.00 0.00 0.00 2.66
3049 3444 4.918810 ACCTGCCAACAAAGTAGAAAAG 57.081 40.909 0.00 0.00 0.00 2.27
3050 3445 5.669164 AAACCTGCCAACAAAGTAGAAAA 57.331 34.783 0.00 0.00 0.00 2.29
3051 3446 5.300792 CCTAAACCTGCCAACAAAGTAGAAA 59.699 40.000 0.00 0.00 0.00 2.52
3052 3447 4.825085 CCTAAACCTGCCAACAAAGTAGAA 59.175 41.667 0.00 0.00 0.00 2.10
3053 3448 4.141344 ACCTAAACCTGCCAACAAAGTAGA 60.141 41.667 0.00 0.00 0.00 2.59
3054 3449 4.142038 ACCTAAACCTGCCAACAAAGTAG 58.858 43.478 0.00 0.00 0.00 2.57
3055 3450 4.173290 ACCTAAACCTGCCAACAAAGTA 57.827 40.909 0.00 0.00 0.00 2.24
3056 3451 3.026707 ACCTAAACCTGCCAACAAAGT 57.973 42.857 0.00 0.00 0.00 2.66
3057 3452 4.764823 TCATACCTAAACCTGCCAACAAAG 59.235 41.667 0.00 0.00 0.00 2.77
3058 3453 4.730966 TCATACCTAAACCTGCCAACAAA 58.269 39.130 0.00 0.00 0.00 2.83
3059 3454 4.374689 TCATACCTAAACCTGCCAACAA 57.625 40.909 0.00 0.00 0.00 2.83
3060 3455 4.523083 GATCATACCTAAACCTGCCAACA 58.477 43.478 0.00 0.00 0.00 3.33
3061 3456 3.883489 GGATCATACCTAAACCTGCCAAC 59.117 47.826 0.00 0.00 0.00 3.77
3062 3457 3.785887 AGGATCATACCTAAACCTGCCAA 59.214 43.478 0.00 0.00 38.65 4.52
3063 3458 3.393687 AGGATCATACCTAAACCTGCCA 58.606 45.455 0.00 0.00 38.65 4.92
3064 3459 4.560919 CGTAGGATCATACCTAAACCTGCC 60.561 50.000 11.70 0.00 43.06 4.85
3065 3460 4.557205 CGTAGGATCATACCTAAACCTGC 58.443 47.826 11.70 0.00 43.06 4.85
3066 3461 4.281182 AGCGTAGGATCATACCTAAACCTG 59.719 45.833 11.70 0.00 43.06 4.00
3067 3462 4.481072 AGCGTAGGATCATACCTAAACCT 58.519 43.478 11.70 0.00 43.06 3.50
3068 3463 4.280174 TGAGCGTAGGATCATACCTAAACC 59.720 45.833 11.70 0.44 43.06 3.27
3069 3464 5.449107 TGAGCGTAGGATCATACCTAAAC 57.551 43.478 11.70 1.13 43.06 2.01
3070 3465 5.538813 ACATGAGCGTAGGATCATACCTAAA 59.461 40.000 15.16 3.56 46.98 1.85
3071 3466 5.077564 ACATGAGCGTAGGATCATACCTAA 58.922 41.667 15.16 4.17 46.98 2.69
3072 3467 4.663334 ACATGAGCGTAGGATCATACCTA 58.337 43.478 15.16 0.00 46.98 3.08
3073 3468 3.501349 ACATGAGCGTAGGATCATACCT 58.499 45.455 15.16 9.56 46.98 3.08
3074 3469 3.944055 ACATGAGCGTAGGATCATACC 57.056 47.619 15.16 5.15 46.98 2.73
3075 3470 4.153655 TCGTACATGAGCGTAGGATCATAC 59.846 45.833 15.16 10.36 46.98 2.39
3076 3471 4.320870 TCGTACATGAGCGTAGGATCATA 58.679 43.478 15.16 0.00 46.98 2.15
3078 3473 2.567985 TCGTACATGAGCGTAGGATCA 58.432 47.619 5.77 5.77 43.70 2.92
3079 3474 3.493272 CATCGTACATGAGCGTAGGATC 58.507 50.000 0.00 0.00 42.25 3.36
3080 3475 2.351835 GCATCGTACATGAGCGTAGGAT 60.352 50.000 0.00 0.00 43.97 3.24
3081 3476 1.001706 GCATCGTACATGAGCGTAGGA 60.002 52.381 0.00 0.00 39.72 2.94
3082 3477 1.269051 TGCATCGTACATGAGCGTAGG 60.269 52.381 0.00 0.00 0.00 3.18
3083 3478 2.119671 TGCATCGTACATGAGCGTAG 57.880 50.000 0.00 2.31 0.00 3.51
3084 3479 2.393764 CATGCATCGTACATGAGCGTA 58.606 47.619 0.00 0.00 46.33 4.42
3085 3480 1.211743 CATGCATCGTACATGAGCGT 58.788 50.000 0.00 0.00 46.33 5.07
3086 3481 0.110956 GCATGCATCGTACATGAGCG 60.111 55.000 14.21 3.30 46.33 5.03
3087 3482 0.236711 GGCATGCATCGTACATGAGC 59.763 55.000 21.36 0.00 46.33 4.26
3088 3483 0.870393 GGGCATGCATCGTACATGAG 59.130 55.000 21.36 0.00 46.33 2.90
3089 3484 0.534877 GGGGCATGCATCGTACATGA 60.535 55.000 21.36 0.00 46.33 3.07
3090 3485 0.818852 TGGGGCATGCATCGTACATG 60.819 55.000 21.36 9.64 46.19 3.21
3091 3486 0.819259 GTGGGGCATGCATCGTACAT 60.819 55.000 21.36 0.00 0.00 2.29
3092 3487 1.451207 GTGGGGCATGCATCGTACA 60.451 57.895 21.36 5.60 0.00 2.90
3093 3488 1.451207 TGTGGGGCATGCATCGTAC 60.451 57.895 21.36 13.11 0.00 3.67
3094 3489 1.451207 GTGTGGGGCATGCATCGTA 60.451 57.895 21.36 0.00 0.00 3.43
3095 3490 2.751436 GTGTGGGGCATGCATCGT 60.751 61.111 21.36 0.00 0.00 3.73
3096 3491 2.341875 TTGTGTGGGGCATGCATCG 61.342 57.895 21.36 0.00 0.00 3.84
3097 3492 1.216178 GTTGTGTGGGGCATGCATC 59.784 57.895 21.36 11.24 0.00 3.91
3098 3493 2.285024 GGTTGTGTGGGGCATGCAT 61.285 57.895 21.36 0.00 0.00 3.96
3099 3494 2.916703 GGTTGTGTGGGGCATGCA 60.917 61.111 21.36 0.00 0.00 3.96
3100 3495 3.694538 GGGTTGTGTGGGGCATGC 61.695 66.667 9.90 9.90 0.00 4.06
3101 3496 1.193462 ATTGGGTTGTGTGGGGCATG 61.193 55.000 0.00 0.00 0.00 4.06
3102 3497 0.473501 AATTGGGTTGTGTGGGGCAT 60.474 50.000 0.00 0.00 0.00 4.40
3103 3498 1.074926 AATTGGGTTGTGTGGGGCA 60.075 52.632 0.00 0.00 0.00 5.36
3104 3499 1.118356 TGAATTGGGTTGTGTGGGGC 61.118 55.000 0.00 0.00 0.00 5.80
3105 3500 0.678950 GTGAATTGGGTTGTGTGGGG 59.321 55.000 0.00 0.00 0.00 4.96
3106 3501 1.613437 GAGTGAATTGGGTTGTGTGGG 59.387 52.381 0.00 0.00 0.00 4.61
3107 3502 2.034558 GTGAGTGAATTGGGTTGTGTGG 59.965 50.000 0.00 0.00 0.00 4.17
3108 3503 2.286950 CGTGAGTGAATTGGGTTGTGTG 60.287 50.000 0.00 0.00 0.00 3.82
3109 3504 1.946768 CGTGAGTGAATTGGGTTGTGT 59.053 47.619 0.00 0.00 0.00 3.72
3110 3505 1.334960 GCGTGAGTGAATTGGGTTGTG 60.335 52.381 0.00 0.00 0.00 3.33
3111 3506 0.951558 GCGTGAGTGAATTGGGTTGT 59.048 50.000 0.00 0.00 0.00 3.32
3112 3507 0.240945 GGCGTGAGTGAATTGGGTTG 59.759 55.000 0.00 0.00 0.00 3.77
3113 3508 0.110486 AGGCGTGAGTGAATTGGGTT 59.890 50.000 0.00 0.00 0.00 4.11
3114 3509 0.321653 GAGGCGTGAGTGAATTGGGT 60.322 55.000 0.00 0.00 0.00 4.51
3115 3510 0.036010 AGAGGCGTGAGTGAATTGGG 60.036 55.000 0.00 0.00 0.00 4.12
3116 3511 1.363744 GAGAGGCGTGAGTGAATTGG 58.636 55.000 0.00 0.00 0.00 3.16
3117 3512 1.066573 AGGAGAGGCGTGAGTGAATTG 60.067 52.381 0.00 0.00 0.00 2.32
3118 3513 1.270907 AGGAGAGGCGTGAGTGAATT 58.729 50.000 0.00 0.00 0.00 2.17
3119 3514 1.205893 GAAGGAGAGGCGTGAGTGAAT 59.794 52.381 0.00 0.00 0.00 2.57
3120 3515 0.603569 GAAGGAGAGGCGTGAGTGAA 59.396 55.000 0.00 0.00 0.00 3.18
3121 3516 0.251386 AGAAGGAGAGGCGTGAGTGA 60.251 55.000 0.00 0.00 0.00 3.41
3122 3517 0.172352 GAGAAGGAGAGGCGTGAGTG 59.828 60.000 0.00 0.00 0.00 3.51
3123 3518 0.251386 TGAGAAGGAGAGGCGTGAGT 60.251 55.000 0.00 0.00 0.00 3.41
3124 3519 0.455410 CTGAGAAGGAGAGGCGTGAG 59.545 60.000 0.00 0.00 0.00 3.51
3125 3520 1.599606 GCTGAGAAGGAGAGGCGTGA 61.600 60.000 0.00 0.00 0.00 4.35
3126 3521 1.153667 GCTGAGAAGGAGAGGCGTG 60.154 63.158 0.00 0.00 0.00 5.34
3127 3522 0.975040 ATGCTGAGAAGGAGAGGCGT 60.975 55.000 0.00 0.00 0.00 5.68
3128 3523 0.530211 CATGCTGAGAAGGAGAGGCG 60.530 60.000 0.00 0.00 0.00 5.52
3129 3524 0.829333 TCATGCTGAGAAGGAGAGGC 59.171 55.000 0.00 0.00 0.00 4.70
3130 3525 2.109774 AGTCATGCTGAGAAGGAGAGG 58.890 52.381 0.00 0.00 0.00 3.69
3131 3526 3.448301 AGAAGTCATGCTGAGAAGGAGAG 59.552 47.826 0.00 0.00 0.00 3.20
3132 3527 3.195182 CAGAAGTCATGCTGAGAAGGAGA 59.805 47.826 0.00 0.00 34.06 3.71
3133 3528 3.523547 CAGAAGTCATGCTGAGAAGGAG 58.476 50.000 0.00 0.00 34.06 3.69
3134 3529 2.235650 CCAGAAGTCATGCTGAGAAGGA 59.764 50.000 0.00 0.00 34.06 3.36
3135 3530 2.630158 CCAGAAGTCATGCTGAGAAGG 58.370 52.381 0.00 0.00 34.06 3.46
3136 3531 2.008329 GCCAGAAGTCATGCTGAGAAG 58.992 52.381 0.00 0.00 34.06 2.85
3137 3532 1.348696 TGCCAGAAGTCATGCTGAGAA 59.651 47.619 0.00 0.00 34.06 2.87
3138 3533 0.978907 TGCCAGAAGTCATGCTGAGA 59.021 50.000 0.00 0.00 34.06 3.27
3139 3534 1.085091 GTGCCAGAAGTCATGCTGAG 58.915 55.000 0.00 0.00 34.06 3.35
3140 3535 0.689055 AGTGCCAGAAGTCATGCTGA 59.311 50.000 0.00 0.00 34.06 4.26
3141 3536 0.803117 CAGTGCCAGAAGTCATGCTG 59.197 55.000 0.00 0.00 0.00 4.41
3142 3537 0.959372 GCAGTGCCAGAAGTCATGCT 60.959 55.000 2.85 0.00 0.00 3.79
3143 3538 0.959372 AGCAGTGCCAGAAGTCATGC 60.959 55.000 12.58 0.00 0.00 4.06
3144 3539 1.531423 AAGCAGTGCCAGAAGTCATG 58.469 50.000 12.58 0.00 0.00 3.07
3145 3540 2.283145 AAAGCAGTGCCAGAAGTCAT 57.717 45.000 12.58 0.00 0.00 3.06
3146 3541 1.949525 GAAAAGCAGTGCCAGAAGTCA 59.050 47.619 12.58 0.00 0.00 3.41
3147 3542 2.225467 AGAAAAGCAGTGCCAGAAGTC 58.775 47.619 12.58 1.16 0.00 3.01
3148 3543 2.355010 AGAAAAGCAGTGCCAGAAGT 57.645 45.000 12.58 0.00 0.00 3.01
3149 3544 2.883386 AGAAGAAAAGCAGTGCCAGAAG 59.117 45.455 12.58 0.00 0.00 2.85
3150 3545 2.880890 GAGAAGAAAAGCAGTGCCAGAA 59.119 45.455 12.58 0.00 0.00 3.02
3151 3546 2.158769 TGAGAAGAAAAGCAGTGCCAGA 60.159 45.455 12.58 0.00 0.00 3.86
3152 3547 2.224606 TGAGAAGAAAAGCAGTGCCAG 58.775 47.619 12.58 0.00 0.00 4.85
3153 3548 2.346766 TGAGAAGAAAAGCAGTGCCA 57.653 45.000 12.58 0.00 0.00 4.92
3154 3549 3.715628 TTTGAGAAGAAAAGCAGTGCC 57.284 42.857 12.58 0.00 0.00 5.01
3155 3550 4.864247 TGTTTTTGAGAAGAAAAGCAGTGC 59.136 37.500 7.13 7.13 32.92 4.40
3156 3551 6.755190 GTTGTTTTTGAGAAGAAAAGCAGTG 58.245 36.000 0.00 0.00 37.35 3.66
3157 3552 6.951256 GTTGTTTTTGAGAAGAAAAGCAGT 57.049 33.333 0.00 0.00 37.35 4.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.