Multiple sequence alignment - TraesCS4D01G222300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G222300 chr4D 100.000 5978 0 0 1 5978 379347130 379353107 0.000000e+00 11040
1 TraesCS4D01G222300 chr4D 84.778 427 50 8 1 419 451794611 451795030 1.200000e-111 414
2 TraesCS4D01G222300 chr4B 92.366 5017 262 55 813 5765 466588817 466593776 0.000000e+00 7031
3 TraesCS4D01G222300 chr4B 88.021 192 15 7 1 189 134927774 134927960 2.800000e-53 220
4 TraesCS4D01G222300 chr4A 96.514 2754 68 14 805 3535 85207519 85204771 0.000000e+00 4529
5 TraesCS4D01G222300 chr4A 93.422 2417 108 29 3594 5978 85204772 85202375 0.000000e+00 3535
6 TraesCS4D01G222300 chr7B 83.333 492 51 19 171 656 586699489 586699955 5.540000e-115 425
7 TraesCS4D01G222300 chr7B 79.475 419 58 21 1 393 644297668 644298084 7.630000e-69 272
8 TraesCS4D01G222300 chr2A 81.928 498 70 11 163 643 768684656 768685150 2.590000e-108 403
9 TraesCS4D01G222300 chr2A 85.366 205 24 4 444 642 642973357 642973153 2.180000e-49 207
10 TraesCS4D01G222300 chr1D 81.818 495 74 12 163 645 467241472 467240982 9.330000e-108 401
11 TraesCS4D01G222300 chr1D 82.101 257 29 12 33 279 360437046 360437295 2.820000e-48 204
12 TraesCS4D01G222300 chr3A 82.341 487 61 14 163 630 56211431 56211911 3.360000e-107 399
13 TraesCS4D01G222300 chr3A 82.684 462 60 11 191 640 737403356 737403809 5.620000e-105 392
14 TraesCS4D01G222300 chr7D 82.402 483 59 17 171 640 556216268 556215799 1.210000e-106 398
15 TraesCS4D01G222300 chr6D 81.670 491 72 12 163 643 62200973 62201455 5.620000e-105 392
16 TraesCS4D01G222300 chr1A 82.366 465 66 12 198 651 391243199 391242740 2.020000e-104 390
17 TraesCS4D01G222300 chr1A 82.046 479 67 13 179 643 521562952 521562479 2.020000e-104 390
18 TraesCS4D01G222300 chr5B 84.790 309 32 13 1 296 701165954 701166260 4.530000e-76 296
19 TraesCS4D01G222300 chr5B 83.516 273 34 10 4 268 691454797 691454528 1.660000e-60 244
20 TraesCS4D01G222300 chr3D 88.710 186 16 4 6 189 39312863 39313045 7.800000e-54 222
21 TraesCS4D01G222300 chr1B 88.108 185 14 6 1 182 39625205 39625384 4.690000e-51 213


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G222300 chr4D 379347130 379353107 5977 False 11040 11040 100.000 1 5978 1 chr4D.!!$F1 5977
1 TraesCS4D01G222300 chr4B 466588817 466593776 4959 False 7031 7031 92.366 813 5765 1 chr4B.!!$F2 4952
2 TraesCS4D01G222300 chr4A 85202375 85207519 5144 True 4032 4529 94.968 805 5978 2 chr4A.!!$R1 5173

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
396 397 0.035056 ATGACTCTCGCAAAAGGGGG 60.035 55.0 0.00 0.0 0.00 5.40 F
520 521 0.095417 GCCAAAAACGCGTGCAAAAA 59.905 45.0 14.98 0.0 0.00 1.94 F
669 670 0.102300 AACCAAAGCCGTTTGTGCTC 59.898 50.0 0.00 0.0 41.44 4.26 F
684 685 0.250858 TGCTCAGTCCATGTTGGTGG 60.251 55.0 0.00 0.0 39.03 4.61 F
1344 1361 0.389166 CCAGATCGCCGCTTATCCTC 60.389 60.0 0.00 0.0 0.00 3.71 F
2525 2558 2.512485 TGCCATTCTTTTGCACACTG 57.488 45.0 0.00 0.0 0.00 3.66 F
3544 3600 0.176680 CTTCAGCATCACTAGCGGGT 59.823 55.0 0.00 0.0 37.01 5.28 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2006 2025 1.080025 GTCCTGACACCACGCTACC 60.080 63.158 0.00 0.00 0.00 3.18 R
2258 2283 1.790387 GCATGTCCTGCGTCTGTTC 59.210 57.895 0.00 0.00 41.97 3.18 R
2381 2414 4.204012 TGGAGAATGAAACGAAACCAGTT 58.796 39.130 0.00 0.00 0.00 3.16 R
3530 3586 0.104855 TCATGACCCGCTAGTGATGC 59.895 55.000 4.44 0.00 32.14 3.91 R
3544 3600 7.671302 AGCTAGAAACTAAGTCAAAGTCATGA 58.329 34.615 0.00 0.00 0.00 3.07 R
4935 5000 0.321122 CAGCAGTTGACACCTCCTCC 60.321 60.000 0.00 0.00 0.00 4.30 R
5680 5749 0.103208 GAGCTCCCGTGTCATGGTAG 59.897 60.000 10.28 4.82 0.00 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 3.294079 GGACGAGAAAACCGAACCA 57.706 52.632 0.00 0.00 0.00 3.67
23 24 1.145803 GGACGAGAAAACCGAACCAG 58.854 55.000 0.00 0.00 0.00 4.00
24 25 1.145803 GACGAGAAAACCGAACCAGG 58.854 55.000 0.00 0.00 37.30 4.45
25 26 0.754472 ACGAGAAAACCGAACCAGGA 59.246 50.000 0.00 0.00 34.73 3.86
26 27 1.270147 ACGAGAAAACCGAACCAGGAG 60.270 52.381 0.00 0.00 34.73 3.69
27 28 1.157585 GAGAAAACCGAACCAGGAGC 58.842 55.000 0.00 0.00 34.73 4.70
28 29 0.472471 AGAAAACCGAACCAGGAGCA 59.528 50.000 0.00 0.00 34.73 4.26
29 30 1.073923 AGAAAACCGAACCAGGAGCAT 59.926 47.619 0.00 0.00 34.73 3.79
30 31 1.200020 GAAAACCGAACCAGGAGCATG 59.800 52.381 0.00 0.00 34.73 4.06
31 32 0.609131 AAACCGAACCAGGAGCATGG 60.609 55.000 0.00 0.00 46.47 3.66
32 33 2.124570 CCGAACCAGGAGCATGGG 60.125 66.667 6.11 0.00 45.25 4.00
33 34 2.671070 CGAACCAGGAGCATGGGT 59.329 61.111 6.11 0.00 45.31 4.51
34 35 1.002134 CGAACCAGGAGCATGGGTT 60.002 57.895 6.11 3.29 41.61 4.11
35 36 0.609131 CGAACCAGGAGCATGGGTTT 60.609 55.000 6.11 0.00 41.61 3.27
36 37 1.632589 GAACCAGGAGCATGGGTTTT 58.367 50.000 6.11 0.00 41.61 2.43
37 38 1.970640 GAACCAGGAGCATGGGTTTTT 59.029 47.619 6.11 0.00 41.61 1.94
55 56 1.905637 TTTCCCTTTCCGAAAGAGGC 58.094 50.000 20.43 0.00 41.02 4.70
56 57 0.768622 TTCCCTTTCCGAAAGAGGCA 59.231 50.000 20.43 8.95 41.02 4.75
57 58 0.036306 TCCCTTTCCGAAAGAGGCAC 59.964 55.000 20.43 0.00 41.02 5.01
58 59 1.298859 CCCTTTCCGAAAGAGGCACG 61.299 60.000 20.43 4.41 41.02 5.34
59 60 1.497722 CTTTCCGAAAGAGGCACGC 59.502 57.895 14.72 0.00 41.02 5.34
60 61 1.912371 CTTTCCGAAAGAGGCACGCC 61.912 60.000 14.72 0.00 41.02 5.68
61 62 3.894547 TTCCGAAAGAGGCACGCCC 62.895 63.158 3.95 0.00 36.58 6.13
81 82 1.795768 GTGCCTCTCACGAAATCACA 58.204 50.000 0.00 0.00 35.76 3.58
82 83 2.143122 GTGCCTCTCACGAAATCACAA 58.857 47.619 0.00 0.00 35.76 3.33
83 84 2.096218 GTGCCTCTCACGAAATCACAAC 60.096 50.000 0.00 0.00 35.76 3.32
84 85 1.464997 GCCTCTCACGAAATCACAACC 59.535 52.381 0.00 0.00 0.00 3.77
85 86 1.726791 CCTCTCACGAAATCACAACCG 59.273 52.381 0.00 0.00 0.00 4.44
86 87 2.404215 CTCTCACGAAATCACAACCGT 58.596 47.619 0.00 0.00 35.46 4.83
88 89 3.071495 CACGAAATCACAACCGTGC 57.929 52.632 0.00 0.00 44.24 5.34
89 90 0.385473 CACGAAATCACAACCGTGCC 60.385 55.000 0.00 0.00 44.24 5.01
90 91 0.534203 ACGAAATCACAACCGTGCCT 60.534 50.000 0.00 0.00 43.28 4.75
91 92 0.165944 CGAAATCACAACCGTGCCTC 59.834 55.000 0.00 0.00 43.28 4.70
92 93 1.523758 GAAATCACAACCGTGCCTCT 58.476 50.000 0.00 0.00 43.28 3.69
93 94 1.464997 GAAATCACAACCGTGCCTCTC 59.535 52.381 0.00 0.00 43.28 3.20
94 95 0.670546 AATCACAACCGTGCCTCTCG 60.671 55.000 0.00 0.00 43.28 4.04
95 96 3.414700 CACAACCGTGCCTCTCGC 61.415 66.667 0.00 0.00 36.06 5.03
101 102 4.421479 CGTGCCTCTCGCGGAAGT 62.421 66.667 6.13 0.00 44.36 3.01
102 103 2.882876 GTGCCTCTCGCGGAAGTA 59.117 61.111 6.13 0.00 42.08 2.24
103 104 1.214589 GTGCCTCTCGCGGAAGTAA 59.785 57.895 6.13 0.00 42.08 2.24
104 105 0.389426 GTGCCTCTCGCGGAAGTAAA 60.389 55.000 6.13 0.00 42.08 2.01
105 106 0.319083 TGCCTCTCGCGGAAGTAAAA 59.681 50.000 6.13 0.00 42.08 1.52
106 107 0.720027 GCCTCTCGCGGAAGTAAAAC 59.280 55.000 6.13 0.00 0.00 2.43
107 108 1.356938 CCTCTCGCGGAAGTAAAACC 58.643 55.000 6.13 0.00 0.00 3.27
115 116 2.064014 CGGAAGTAAAACCGTGACTCC 58.936 52.381 0.00 0.00 43.53 3.85
116 117 2.420642 GGAAGTAAAACCGTGACTCCC 58.579 52.381 0.00 0.00 0.00 4.30
117 118 2.064014 GAAGTAAAACCGTGACTCCCG 58.936 52.381 0.00 0.00 0.00 5.14
118 119 0.320160 AGTAAAACCGTGACTCCCGC 60.320 55.000 0.00 0.00 0.00 6.13
125 126 4.667420 GTGACTCCCGCGAAAGAA 57.333 55.556 8.23 0.00 0.00 2.52
126 127 2.908817 GTGACTCCCGCGAAAGAAA 58.091 52.632 8.23 0.00 0.00 2.52
127 128 1.223187 GTGACTCCCGCGAAAGAAAA 58.777 50.000 8.23 0.00 0.00 2.29
128 129 1.600485 GTGACTCCCGCGAAAGAAAAA 59.400 47.619 8.23 0.00 0.00 1.94
175 176 3.432588 ACGGCCGTGACTCTCTCG 61.433 66.667 33.75 0.00 33.67 4.04
176 177 4.838486 CGGCCGTGACTCTCTCGC 62.838 72.222 19.50 0.00 32.67 5.03
183 184 2.333389 GTGACTCTCTCGCGAAAGAA 57.667 50.000 13.99 0.00 0.00 2.52
184 185 2.662700 GTGACTCTCTCGCGAAAGAAA 58.337 47.619 13.99 0.00 0.00 2.52
185 186 3.050619 GTGACTCTCTCGCGAAAGAAAA 58.949 45.455 13.99 0.00 0.00 2.29
186 187 3.489785 GTGACTCTCTCGCGAAAGAAAAA 59.510 43.478 13.99 0.00 0.00 1.94
187 188 3.489785 TGACTCTCTCGCGAAAGAAAAAC 59.510 43.478 13.99 5.86 0.00 2.43
188 189 3.454375 ACTCTCTCGCGAAAGAAAAACA 58.546 40.909 13.99 0.00 0.00 2.83
189 190 3.491267 ACTCTCTCGCGAAAGAAAAACAG 59.509 43.478 13.99 3.13 0.00 3.16
190 191 3.713288 TCTCTCGCGAAAGAAAAACAGA 58.287 40.909 10.27 0.00 0.00 3.41
191 192 4.116961 TCTCTCGCGAAAGAAAAACAGAA 58.883 39.130 10.27 0.00 0.00 3.02
192 193 4.569162 TCTCTCGCGAAAGAAAAACAGAAA 59.431 37.500 10.27 0.00 0.00 2.52
193 194 5.064198 TCTCTCGCGAAAGAAAAACAGAAAA 59.936 36.000 10.27 0.00 0.00 2.29
194 195 5.025826 TCTCGCGAAAGAAAAACAGAAAAC 58.974 37.500 11.33 0.00 0.00 2.43
195 196 4.724303 TCGCGAAAGAAAAACAGAAAACA 58.276 34.783 6.20 0.00 0.00 2.83
196 197 4.555747 TCGCGAAAGAAAAACAGAAAACAC 59.444 37.500 6.20 0.00 0.00 3.32
197 198 4.543658 CGCGAAAGAAAAACAGAAAACACG 60.544 41.667 0.00 0.00 0.00 4.49
198 199 4.322539 GCGAAAGAAAAACAGAAAACACGT 59.677 37.500 0.00 0.00 0.00 4.49
199 200 5.164129 GCGAAAGAAAAACAGAAAACACGTT 60.164 36.000 0.00 0.00 0.00 3.99
200 201 6.614789 GCGAAAGAAAAACAGAAAACACGTTT 60.615 34.615 0.00 0.00 34.42 3.60
201 202 7.277917 CGAAAGAAAAACAGAAAACACGTTTT 58.722 30.769 7.59 7.59 44.59 2.43
227 228 3.129502 CGAGAGGTACGGCCGTGA 61.130 66.667 40.02 21.06 43.70 4.35
228 229 2.488820 GAGAGGTACGGCCGTGAC 59.511 66.667 40.02 30.04 43.70 3.67
229 230 2.035312 AGAGGTACGGCCGTGACT 59.965 61.111 40.02 33.90 43.70 3.41
230 231 1.991099 GAGAGGTACGGCCGTGACTC 61.991 65.000 36.67 36.67 43.70 3.36
231 232 2.035312 AGGTACGGCCGTGACTCT 59.965 61.111 40.02 25.90 43.70 3.24
232 233 1.991099 GAGGTACGGCCGTGACTCTC 61.991 65.000 36.43 30.69 43.70 3.20
233 234 2.099831 GTACGGCCGTGACTCTCG 59.900 66.667 40.02 6.33 0.00 4.04
234 235 3.807538 TACGGCCGTGACTCTCGC 61.808 66.667 40.02 0.00 0.00 5.03
240 241 2.561885 CGTGACTCTCGCGGAAGT 59.438 61.111 6.13 10.41 45.61 3.01
241 242 1.792301 CGTGACTCTCGCGGAAGTA 59.208 57.895 6.13 0.00 45.61 2.24
242 243 0.377554 CGTGACTCTCGCGGAAGTAT 59.622 55.000 6.13 0.00 45.61 2.12
243 244 1.596260 CGTGACTCTCGCGGAAGTATA 59.404 52.381 6.13 0.43 45.61 1.47
244 245 2.031314 CGTGACTCTCGCGGAAGTATAA 59.969 50.000 6.13 0.00 45.61 0.98
245 246 3.361414 GTGACTCTCGCGGAAGTATAAC 58.639 50.000 6.13 6.20 0.00 1.89
246 247 2.357009 TGACTCTCGCGGAAGTATAACC 59.643 50.000 6.13 0.00 0.00 2.85
253 254 1.849097 CGGAAGTATAACCGTGCCTC 58.151 55.000 0.00 0.00 43.53 4.70
254 255 1.407979 CGGAAGTATAACCGTGCCTCT 59.592 52.381 0.00 0.00 43.53 3.69
255 256 2.543238 CGGAAGTATAACCGTGCCTCTC 60.543 54.545 0.00 0.00 43.53 3.20
256 257 2.543238 GGAAGTATAACCGTGCCTCTCG 60.543 54.545 0.00 0.00 0.00 4.04
257 258 0.384669 AGTATAACCGTGCCTCTCGC 59.615 55.000 0.00 0.00 38.31 5.03
277 278 3.904136 CGAAAGCAAAACCATGACTCT 57.096 42.857 0.00 0.00 0.00 3.24
278 279 3.814945 CGAAAGCAAAACCATGACTCTC 58.185 45.455 0.00 0.00 0.00 3.20
279 280 3.665323 CGAAAGCAAAACCATGACTCTCG 60.665 47.826 0.00 0.00 0.00 4.04
280 281 1.160137 AGCAAAACCATGACTCTCGC 58.840 50.000 0.00 0.00 0.00 5.03
281 282 0.179215 GCAAAACCATGACTCTCGCG 60.179 55.000 0.00 0.00 0.00 5.87
282 283 1.428448 CAAAACCATGACTCTCGCGA 58.572 50.000 9.26 9.26 0.00 5.87
283 284 1.798223 CAAAACCATGACTCTCGCGAA 59.202 47.619 11.33 0.00 0.00 4.70
284 285 2.163818 AAACCATGACTCTCGCGAAA 57.836 45.000 11.33 0.00 0.00 3.46
285 286 1.714794 AACCATGACTCTCGCGAAAG 58.285 50.000 11.33 9.68 0.00 2.62
286 287 0.888619 ACCATGACTCTCGCGAAAGA 59.111 50.000 17.91 7.21 0.00 2.52
287 288 1.272490 ACCATGACTCTCGCGAAAGAA 59.728 47.619 17.91 4.14 0.00 2.52
288 289 2.288825 ACCATGACTCTCGCGAAAGAAA 60.289 45.455 17.91 3.74 0.00 2.52
289 290 2.736721 CCATGACTCTCGCGAAAGAAAA 59.263 45.455 17.91 1.00 0.00 2.29
290 291 3.186409 CCATGACTCTCGCGAAAGAAAAA 59.814 43.478 17.91 0.00 0.00 1.94
311 312 5.977171 AAAAACAGTAAACGCATTTTCCC 57.023 34.783 0.00 0.00 0.00 3.97
312 313 3.653539 AACAGTAAACGCATTTTCCCC 57.346 42.857 0.00 0.00 0.00 4.81
313 314 1.538075 ACAGTAAACGCATTTTCCCCG 59.462 47.619 0.00 0.00 0.00 5.73
314 315 1.538075 CAGTAAACGCATTTTCCCCGT 59.462 47.619 0.00 0.00 36.68 5.28
315 316 2.030628 CAGTAAACGCATTTTCCCCGTT 60.031 45.455 0.00 0.00 45.84 4.44
317 318 3.877874 AACGCATTTTCCCCGTTTC 57.122 47.368 0.00 0.00 41.81 2.78
318 319 0.315886 AACGCATTTTCCCCGTTTCC 59.684 50.000 0.00 0.00 41.81 3.13
319 320 1.154112 CGCATTTTCCCCGTTTCCG 60.154 57.895 0.00 0.00 0.00 4.30
320 321 1.579084 CGCATTTTCCCCGTTTCCGA 61.579 55.000 0.00 0.00 35.63 4.55
321 322 0.170339 GCATTTTCCCCGTTTCCGAG 59.830 55.000 0.00 0.00 35.63 4.63
322 323 1.816074 CATTTTCCCCGTTTCCGAGA 58.184 50.000 0.00 0.00 35.63 4.04
323 324 2.156098 CATTTTCCCCGTTTCCGAGAA 58.844 47.619 0.00 0.00 35.63 2.87
324 325 1.886886 TTTTCCCCGTTTCCGAGAAG 58.113 50.000 0.00 0.00 35.63 2.85
325 326 0.604511 TTTCCCCGTTTCCGAGAAGC 60.605 55.000 0.00 0.00 35.63 3.86
326 327 1.760479 TTCCCCGTTTCCGAGAAGCA 61.760 55.000 0.00 0.00 35.63 3.91
327 328 1.078426 CCCCGTTTCCGAGAAGCAT 60.078 57.895 0.00 0.00 35.63 3.79
328 329 1.369091 CCCCGTTTCCGAGAAGCATG 61.369 60.000 0.00 0.00 35.63 4.06
329 330 1.369091 CCCGTTTCCGAGAAGCATGG 61.369 60.000 0.00 0.00 35.63 3.66
330 331 1.425428 CGTTTCCGAGAAGCATGGC 59.575 57.895 0.00 0.00 35.63 4.40
331 332 1.021390 CGTTTCCGAGAAGCATGGCT 61.021 55.000 0.00 0.00 36.91 4.75
332 333 0.449388 GTTTCCGAGAAGCATGGCTG 59.551 55.000 0.00 0.00 39.62 4.85
333 334 0.036732 TTTCCGAGAAGCATGGCTGT 59.963 50.000 0.00 0.00 39.62 4.40
334 335 0.674581 TTCCGAGAAGCATGGCTGTG 60.675 55.000 0.00 0.00 39.62 3.66
335 336 1.078918 CCGAGAAGCATGGCTGTGA 60.079 57.895 0.00 0.00 39.62 3.58
336 337 0.463295 CCGAGAAGCATGGCTGTGAT 60.463 55.000 0.00 0.00 39.62 3.06
337 338 1.376543 CGAGAAGCATGGCTGTGATT 58.623 50.000 0.00 0.00 39.62 2.57
338 339 1.329906 CGAGAAGCATGGCTGTGATTC 59.670 52.381 11.63 11.63 43.03 2.52
339 340 2.803030 AGAAGCATGGCTGTGATTCT 57.197 45.000 14.95 14.95 46.62 2.40
341 342 2.362736 GAAGCATGGCTGTGATTCTCA 58.637 47.619 12.09 0.00 40.39 3.27
354 355 3.975035 GTGATTCTCACGAAAGCAAAACC 59.025 43.478 0.00 0.00 37.67 3.27
355 356 2.748461 TTCTCACGAAAGCAAAACCG 57.252 45.000 0.00 0.00 0.00 4.44
356 357 1.658994 TCTCACGAAAGCAAAACCGT 58.341 45.000 0.00 0.00 35.46 4.83
357 358 2.823984 TCTCACGAAAGCAAAACCGTA 58.176 42.857 0.00 0.00 33.62 4.02
358 359 2.540931 TCTCACGAAAGCAAAACCGTAC 59.459 45.455 0.00 0.00 33.62 3.67
359 360 1.598601 TCACGAAAGCAAAACCGTACC 59.401 47.619 0.00 0.00 33.62 3.34
360 361 1.600485 CACGAAAGCAAAACCGTACCT 59.400 47.619 0.00 0.00 33.62 3.08
361 362 1.869132 ACGAAAGCAAAACCGTACCTC 59.131 47.619 0.00 0.00 33.13 3.85
362 363 2.140717 CGAAAGCAAAACCGTACCTCT 58.859 47.619 0.00 0.00 0.00 3.69
363 364 2.157085 CGAAAGCAAAACCGTACCTCTC 59.843 50.000 0.00 0.00 0.00 3.20
364 365 2.922740 AAGCAAAACCGTACCTCTCA 57.077 45.000 0.00 0.00 0.00 3.27
365 366 2.165319 AGCAAAACCGTACCTCTCAC 57.835 50.000 0.00 0.00 0.00 3.51
366 367 0.788391 GCAAAACCGTACCTCTCACG 59.212 55.000 0.00 0.00 39.10 4.35
367 368 1.603678 GCAAAACCGTACCTCTCACGA 60.604 52.381 0.00 0.00 41.91 4.35
368 369 2.746269 CAAAACCGTACCTCTCACGAA 58.254 47.619 0.00 0.00 41.91 3.85
369 370 2.719426 AAACCGTACCTCTCACGAAG 57.281 50.000 0.00 0.00 41.91 3.79
370 371 0.243095 AACCGTACCTCTCACGAAGC 59.757 55.000 0.00 0.00 41.91 3.86
371 372 0.892358 ACCGTACCTCTCACGAAGCA 60.892 55.000 0.00 0.00 41.91 3.91
372 373 0.242825 CCGTACCTCTCACGAAGCAA 59.757 55.000 0.00 0.00 41.91 3.91
373 374 1.336517 CCGTACCTCTCACGAAGCAAA 60.337 52.381 0.00 0.00 41.91 3.68
374 375 2.400399 CGTACCTCTCACGAAGCAAAA 58.600 47.619 0.00 0.00 41.91 2.44
375 376 2.155155 CGTACCTCTCACGAAGCAAAAC 59.845 50.000 0.00 0.00 41.91 2.43
376 377 1.594331 ACCTCTCACGAAGCAAAACC 58.406 50.000 0.00 0.00 0.00 3.27
377 378 1.134220 ACCTCTCACGAAGCAAAACCA 60.134 47.619 0.00 0.00 0.00 3.67
378 379 2.154462 CCTCTCACGAAGCAAAACCAT 58.846 47.619 0.00 0.00 0.00 3.55
379 380 2.095567 CCTCTCACGAAGCAAAACCATG 60.096 50.000 0.00 0.00 0.00 3.66
380 381 2.807967 CTCTCACGAAGCAAAACCATGA 59.192 45.455 0.00 0.00 0.00 3.07
381 382 2.548057 TCTCACGAAGCAAAACCATGAC 59.452 45.455 0.00 0.00 0.00 3.06
382 383 2.549754 CTCACGAAGCAAAACCATGACT 59.450 45.455 0.00 0.00 0.00 3.41
383 384 2.548057 TCACGAAGCAAAACCATGACTC 59.452 45.455 0.00 0.00 0.00 3.36
384 385 2.549754 CACGAAGCAAAACCATGACTCT 59.450 45.455 0.00 0.00 0.00 3.24
385 386 2.808543 ACGAAGCAAAACCATGACTCTC 59.191 45.455 0.00 0.00 0.00 3.20
386 387 2.159787 CGAAGCAAAACCATGACTCTCG 60.160 50.000 0.00 0.00 0.00 4.04
387 388 1.160137 AGCAAAACCATGACTCTCGC 58.840 50.000 0.00 0.00 0.00 5.03
388 389 0.874390 GCAAAACCATGACTCTCGCA 59.126 50.000 0.00 0.00 0.00 5.10
389 390 1.266718 GCAAAACCATGACTCTCGCAA 59.733 47.619 0.00 0.00 0.00 4.85
390 391 2.287547 GCAAAACCATGACTCTCGCAAA 60.288 45.455 0.00 0.00 0.00 3.68
391 392 3.795150 GCAAAACCATGACTCTCGCAAAA 60.795 43.478 0.00 0.00 0.00 2.44
392 393 3.904136 AAACCATGACTCTCGCAAAAG 57.096 42.857 0.00 0.00 0.00 2.27
393 394 1.813513 ACCATGACTCTCGCAAAAGG 58.186 50.000 0.00 0.00 0.00 3.11
394 395 1.089920 CCATGACTCTCGCAAAAGGG 58.910 55.000 0.00 0.00 0.00 3.95
395 396 1.089920 CATGACTCTCGCAAAAGGGG 58.910 55.000 0.00 0.00 0.00 4.79
396 397 0.035056 ATGACTCTCGCAAAAGGGGG 60.035 55.000 0.00 0.00 0.00 5.40
411 412 3.188773 GGGGGAAAAAGAAAACGCG 57.811 52.632 3.53 3.53 0.00 6.01
412 413 0.386476 GGGGGAAAAAGAAAACGCGT 59.614 50.000 5.58 5.58 0.00 6.01
413 414 1.202440 GGGGGAAAAAGAAAACGCGTT 60.202 47.619 20.79 20.79 0.00 4.84
414 415 2.542597 GGGGAAAAAGAAAACGCGTTT 58.457 42.857 30.36 30.36 0.00 3.60
415 416 2.931325 GGGGAAAAAGAAAACGCGTTTT 59.069 40.909 41.02 41.02 44.59 2.43
416 417 3.371591 GGGGAAAAAGAAAACGCGTTTTT 59.628 39.130 40.53 28.75 42.26 1.94
462 463 7.462571 TTTTAATCAAAAGCTAGGGAAGACC 57.537 36.000 0.00 0.00 40.67 3.85
463 464 2.762535 TCAAAAGCTAGGGAAGACCG 57.237 50.000 0.00 0.00 46.96 4.79
464 465 1.278127 TCAAAAGCTAGGGAAGACCGG 59.722 52.381 0.00 0.00 46.96 5.28
465 466 1.003233 CAAAAGCTAGGGAAGACCGGT 59.997 52.381 6.92 6.92 46.96 5.28
466 467 0.613777 AAAGCTAGGGAAGACCGGTG 59.386 55.000 14.63 0.00 46.96 4.94
467 468 1.265454 AAGCTAGGGAAGACCGGTGG 61.265 60.000 14.63 0.00 46.96 4.61
468 469 1.684734 GCTAGGGAAGACCGGTGGA 60.685 63.158 14.63 0.00 46.96 4.02
469 470 1.262640 GCTAGGGAAGACCGGTGGAA 61.263 60.000 14.63 0.00 46.96 3.53
470 471 1.272807 CTAGGGAAGACCGGTGGAAA 58.727 55.000 14.63 0.00 46.96 3.13
471 472 1.626825 CTAGGGAAGACCGGTGGAAAA 59.373 52.381 14.63 0.00 46.96 2.29
472 473 1.073098 AGGGAAGACCGGTGGAAAAT 58.927 50.000 14.63 0.00 46.96 1.82
473 474 1.004394 AGGGAAGACCGGTGGAAAATC 59.996 52.381 14.63 0.00 46.96 2.17
474 475 1.271707 GGGAAGACCGGTGGAAAATCA 60.272 52.381 14.63 0.00 36.97 2.57
475 476 2.510613 GGAAGACCGGTGGAAAATCAA 58.489 47.619 14.63 0.00 0.00 2.57
476 477 2.888414 GGAAGACCGGTGGAAAATCAAA 59.112 45.455 14.63 0.00 0.00 2.69
477 478 3.319689 GGAAGACCGGTGGAAAATCAAAA 59.680 43.478 14.63 0.00 0.00 2.44
478 479 4.295870 GAAGACCGGTGGAAAATCAAAAC 58.704 43.478 14.63 0.00 0.00 2.43
479 480 2.292292 AGACCGGTGGAAAATCAAAACG 59.708 45.455 14.63 0.00 0.00 3.60
480 481 2.025898 ACCGGTGGAAAATCAAAACGT 58.974 42.857 6.12 0.00 0.00 3.99
481 482 2.033675 ACCGGTGGAAAATCAAAACGTC 59.966 45.455 6.12 0.00 0.00 4.34
482 483 2.303537 CGGTGGAAAATCAAAACGTCG 58.696 47.619 0.00 0.00 0.00 5.12
483 484 2.032722 CGGTGGAAAATCAAAACGTCGA 60.033 45.455 0.00 0.00 0.00 4.20
484 485 3.546417 CGGTGGAAAATCAAAACGTCGAA 60.546 43.478 0.00 0.00 0.00 3.71
485 486 4.352887 GGTGGAAAATCAAAACGTCGAAA 58.647 39.130 0.00 0.00 0.00 3.46
486 487 4.799428 GGTGGAAAATCAAAACGTCGAAAA 59.201 37.500 0.00 0.00 0.00 2.29
487 488 5.288952 GGTGGAAAATCAAAACGTCGAAAAA 59.711 36.000 0.00 0.00 0.00 1.94
508 509 7.482169 AAAAACCCATTAAAAAGGCCAAAAA 57.518 28.000 5.01 0.00 0.00 1.94
509 510 6.458232 AAACCCATTAAAAAGGCCAAAAAC 57.542 33.333 5.01 0.00 0.00 2.43
510 511 4.130857 ACCCATTAAAAAGGCCAAAAACG 58.869 39.130 5.01 0.00 0.00 3.60
511 512 3.058570 CCCATTAAAAAGGCCAAAAACGC 60.059 43.478 5.01 0.00 0.00 4.84
512 513 3.363477 CCATTAAAAAGGCCAAAAACGCG 60.363 43.478 5.01 3.53 0.00 6.01
513 514 2.580966 TAAAAAGGCCAAAAACGCGT 57.419 40.000 5.58 5.58 0.00 6.01
514 515 1.003108 AAAAAGGCCAAAAACGCGTG 58.997 45.000 14.98 0.00 0.00 5.34
515 516 1.425267 AAAAGGCCAAAAACGCGTGC 61.425 50.000 14.98 11.86 0.00 5.34
516 517 2.564553 AAAGGCCAAAAACGCGTGCA 62.565 50.000 14.98 0.00 0.00 4.57
517 518 2.564553 AAGGCCAAAAACGCGTGCAA 62.565 50.000 14.98 0.00 0.00 4.08
518 519 2.167861 GGCCAAAAACGCGTGCAAA 61.168 52.632 14.98 0.00 0.00 3.68
519 520 1.696832 GGCCAAAAACGCGTGCAAAA 61.697 50.000 14.98 0.00 0.00 2.44
520 521 0.095417 GCCAAAAACGCGTGCAAAAA 59.905 45.000 14.98 0.00 0.00 1.94
547 548 4.505313 AAAAACAGAATTCGAAGGGAGC 57.495 40.909 3.35 0.00 0.00 4.70
548 549 2.859165 AACAGAATTCGAAGGGAGCA 57.141 45.000 3.35 0.00 0.00 4.26
549 550 2.100605 ACAGAATTCGAAGGGAGCAC 57.899 50.000 3.35 0.00 0.00 4.40
550 551 1.339151 ACAGAATTCGAAGGGAGCACC 60.339 52.381 3.35 0.00 40.67 5.01
560 561 3.695606 GGAGCACCCAGAGCACGA 61.696 66.667 0.00 0.00 34.14 4.35
561 562 2.433318 GAGCACCCAGAGCACGAC 60.433 66.667 0.00 0.00 0.00 4.34
562 563 2.919856 AGCACCCAGAGCACGACT 60.920 61.111 0.00 0.00 0.00 4.18
563 564 2.433318 GCACCCAGAGCACGACTC 60.433 66.667 0.00 0.00 46.66 3.36
573 574 3.856104 GAGCACGACTCATGATGAATG 57.144 47.619 0.00 0.00 45.49 2.67
574 575 2.543012 GAGCACGACTCATGATGAATGG 59.457 50.000 0.00 0.00 45.49 3.16
575 576 1.003116 GCACGACTCATGATGAATGGC 60.003 52.381 0.00 0.00 36.86 4.40
576 577 2.558378 CACGACTCATGATGAATGGCT 58.442 47.619 0.00 0.00 36.86 4.75
577 578 2.287103 CACGACTCATGATGAATGGCTG 59.713 50.000 0.00 0.00 36.86 4.85
578 579 2.169144 ACGACTCATGATGAATGGCTGA 59.831 45.455 0.00 0.00 36.86 4.26
579 580 2.801111 CGACTCATGATGAATGGCTGAG 59.199 50.000 0.00 0.00 39.35 3.35
580 581 3.492137 CGACTCATGATGAATGGCTGAGA 60.492 47.826 0.00 0.00 37.39 3.27
581 582 4.059511 GACTCATGATGAATGGCTGAGAG 58.940 47.826 0.00 0.00 37.39 3.20
582 583 2.809119 CTCATGATGAATGGCTGAGAGC 59.191 50.000 0.00 0.00 41.46 4.09
583 584 1.531578 CATGATGAATGGCTGAGAGCG 59.468 52.381 0.00 0.00 43.62 5.03
584 585 0.812811 TGATGAATGGCTGAGAGCGC 60.813 55.000 0.00 0.00 43.62 5.92
585 586 1.829349 GATGAATGGCTGAGAGCGCG 61.829 60.000 0.00 0.00 43.62 6.86
586 587 3.934684 GAATGGCTGAGAGCGCGC 61.935 66.667 26.66 26.66 43.62 6.86
587 588 4.463879 AATGGCTGAGAGCGCGCT 62.464 61.111 37.28 37.28 43.62 5.92
588 589 2.960957 GAATGGCTGAGAGCGCGCTA 62.961 60.000 36.69 18.72 43.62 4.26
589 590 2.578163 AATGGCTGAGAGCGCGCTAA 62.578 55.000 36.69 21.47 43.62 3.09
590 591 2.959071 GGCTGAGAGCGCGCTAAG 60.959 66.667 36.69 29.82 43.62 2.18
591 592 2.202676 GCTGAGAGCGCGCTAAGT 60.203 61.111 36.69 22.12 0.00 2.24
592 593 2.512301 GCTGAGAGCGCGCTAAGTG 61.512 63.158 36.69 24.23 0.00 3.16
593 594 1.875813 CTGAGAGCGCGCTAAGTGG 60.876 63.158 36.69 18.91 0.00 4.00
594 595 3.258290 GAGAGCGCGCTAAGTGGC 61.258 66.667 36.69 20.78 0.00 5.01
602 603 3.313750 GCTAAGTGGCGCTGATCG 58.686 61.111 7.64 0.00 42.12 3.69
603 604 1.519455 GCTAAGTGGCGCTGATCGT 60.519 57.895 7.64 0.00 41.07 3.73
604 605 1.084370 GCTAAGTGGCGCTGATCGTT 61.084 55.000 7.64 0.00 41.07 3.85
605 606 0.647410 CTAAGTGGCGCTGATCGTTG 59.353 55.000 7.64 0.00 41.07 4.10
606 607 1.358725 TAAGTGGCGCTGATCGTTGC 61.359 55.000 7.64 0.00 41.07 4.17
612 613 2.510238 GCTGATCGTTGCGAGGCT 60.510 61.111 0.00 0.00 39.91 4.58
613 614 2.520904 GCTGATCGTTGCGAGGCTC 61.521 63.158 3.87 3.87 39.91 4.70
614 615 1.880340 CTGATCGTTGCGAGGCTCC 60.880 63.158 9.32 2.37 39.91 4.70
615 616 2.586357 GATCGTTGCGAGGCTCCC 60.586 66.667 9.32 0.00 39.91 4.30
616 617 4.514577 ATCGTTGCGAGGCTCCCG 62.515 66.667 9.32 6.56 39.91 5.14
618 619 4.735132 CGTTGCGAGGCTCCCGAA 62.735 66.667 9.32 0.00 0.00 4.30
619 620 2.815647 GTTGCGAGGCTCCCGAAG 60.816 66.667 9.32 0.00 0.00 3.79
620 621 2.994995 TTGCGAGGCTCCCGAAGA 60.995 61.111 9.32 0.00 0.00 2.87
621 622 2.579657 TTGCGAGGCTCCCGAAGAA 61.580 57.895 9.32 0.00 0.00 2.52
622 623 2.202810 GCGAGGCTCCCGAAGAAG 60.203 66.667 9.32 0.00 0.00 2.85
623 624 2.202810 CGAGGCTCCCGAAGAAGC 60.203 66.667 9.32 0.00 0.00 3.86
624 625 2.202810 GAGGCTCCCGAAGAAGCG 60.203 66.667 2.15 0.00 0.00 4.68
625 626 4.459089 AGGCTCCCGAAGAAGCGC 62.459 66.667 0.00 0.00 0.00 5.92
626 627 4.459089 GGCTCCCGAAGAAGCGCT 62.459 66.667 2.64 2.64 0.00 5.92
627 628 2.888051 GCTCCCGAAGAAGCGCTC 60.888 66.667 12.06 4.30 0.00 5.03
628 629 2.580867 CTCCCGAAGAAGCGCTCG 60.581 66.667 12.06 10.54 0.00 5.03
629 630 3.343788 CTCCCGAAGAAGCGCTCGT 62.344 63.158 12.06 2.20 0.00 4.18
630 631 2.432628 CCCGAAGAAGCGCTCGTT 60.433 61.111 12.06 7.24 0.00 3.85
631 632 1.153901 CCCGAAGAAGCGCTCGTTA 60.154 57.895 12.06 0.00 0.00 3.18
632 633 0.734942 CCCGAAGAAGCGCTCGTTAA 60.735 55.000 12.06 0.00 0.00 2.01
633 634 1.278238 CCGAAGAAGCGCTCGTTAAT 58.722 50.000 12.06 0.00 0.00 1.40
634 635 1.659098 CCGAAGAAGCGCTCGTTAATT 59.341 47.619 12.06 0.00 0.00 1.40
635 636 2.855963 CCGAAGAAGCGCTCGTTAATTA 59.144 45.455 12.06 0.00 0.00 1.40
636 637 3.061139 CCGAAGAAGCGCTCGTTAATTAG 60.061 47.826 12.06 0.10 0.00 1.73
637 638 3.546670 CGAAGAAGCGCTCGTTAATTAGT 59.453 43.478 12.06 0.00 0.00 2.24
638 639 4.031426 CGAAGAAGCGCTCGTTAATTAGTT 59.969 41.667 12.06 0.00 0.00 2.24
639 640 4.842139 AGAAGCGCTCGTTAATTAGTTG 57.158 40.909 12.06 0.00 0.00 3.16
640 641 3.062234 AGAAGCGCTCGTTAATTAGTTGC 59.938 43.478 12.06 0.00 0.00 4.17
641 642 2.618053 AGCGCTCGTTAATTAGTTGCT 58.382 42.857 2.64 0.00 0.00 3.91
642 643 2.603560 AGCGCTCGTTAATTAGTTGCTC 59.396 45.455 2.64 0.00 0.00 4.26
643 644 2.603560 GCGCTCGTTAATTAGTTGCTCT 59.396 45.455 0.00 0.00 0.00 4.09
644 645 3.301899 GCGCTCGTTAATTAGTTGCTCTC 60.302 47.826 0.00 0.00 0.00 3.20
645 646 3.243177 CGCTCGTTAATTAGTTGCTCTCC 59.757 47.826 0.00 0.00 0.00 3.71
646 647 4.434520 GCTCGTTAATTAGTTGCTCTCCT 58.565 43.478 0.00 0.00 0.00 3.69
647 648 4.504826 GCTCGTTAATTAGTTGCTCTCCTC 59.495 45.833 0.00 0.00 0.00 3.71
648 649 5.651530 CTCGTTAATTAGTTGCTCTCCTCA 58.348 41.667 0.00 0.00 0.00 3.86
649 650 6.032956 TCGTTAATTAGTTGCTCTCCTCAA 57.967 37.500 0.00 0.00 0.00 3.02
650 651 6.460781 TCGTTAATTAGTTGCTCTCCTCAAA 58.539 36.000 0.00 0.00 0.00 2.69
651 652 6.932400 TCGTTAATTAGTTGCTCTCCTCAAAA 59.068 34.615 0.00 0.00 0.00 2.44
652 653 7.015877 CGTTAATTAGTTGCTCTCCTCAAAAC 58.984 38.462 0.00 0.00 0.00 2.43
653 654 5.966742 AATTAGTTGCTCTCCTCAAAACC 57.033 39.130 0.00 0.00 0.00 3.27
654 655 4.431416 TTAGTTGCTCTCCTCAAAACCA 57.569 40.909 0.00 0.00 0.00 3.67
655 656 3.297134 AGTTGCTCTCCTCAAAACCAA 57.703 42.857 0.00 0.00 0.00 3.67
656 657 3.631250 AGTTGCTCTCCTCAAAACCAAA 58.369 40.909 0.00 0.00 0.00 3.28
657 658 3.633986 AGTTGCTCTCCTCAAAACCAAAG 59.366 43.478 0.00 0.00 0.00 2.77
658 659 1.956477 TGCTCTCCTCAAAACCAAAGC 59.044 47.619 0.00 0.00 0.00 3.51
659 660 1.270826 GCTCTCCTCAAAACCAAAGCC 59.729 52.381 0.00 0.00 0.00 4.35
660 661 1.537202 CTCTCCTCAAAACCAAAGCCG 59.463 52.381 0.00 0.00 0.00 5.52
661 662 1.133915 TCTCCTCAAAACCAAAGCCGT 60.134 47.619 0.00 0.00 0.00 5.68
662 663 1.681264 CTCCTCAAAACCAAAGCCGTT 59.319 47.619 0.00 0.00 0.00 4.44
663 664 2.100749 CTCCTCAAAACCAAAGCCGTTT 59.899 45.455 0.00 0.00 34.95 3.60
664 665 2.159170 TCCTCAAAACCAAAGCCGTTTG 60.159 45.455 0.00 0.00 42.49 2.93
665 666 2.418060 CCTCAAAACCAAAGCCGTTTGT 60.418 45.455 0.00 0.00 41.44 2.83
666 667 2.602660 CTCAAAACCAAAGCCGTTTGTG 59.397 45.455 0.00 0.00 41.44 3.33
667 668 1.061857 CAAAACCAAAGCCGTTTGTGC 59.938 47.619 0.00 0.00 41.44 4.57
668 669 0.534873 AAACCAAAGCCGTTTGTGCT 59.465 45.000 0.00 0.00 41.44 4.40
669 670 0.102300 AACCAAAGCCGTTTGTGCTC 59.898 50.000 0.00 0.00 41.44 4.26
670 671 1.034838 ACCAAAGCCGTTTGTGCTCA 61.035 50.000 0.00 0.00 41.44 4.26
671 672 0.318107 CCAAAGCCGTTTGTGCTCAG 60.318 55.000 0.00 0.00 41.44 3.35
672 673 0.381801 CAAAGCCGTTTGTGCTCAGT 59.618 50.000 0.00 0.00 38.34 3.41
673 674 0.663153 AAAGCCGTTTGTGCTCAGTC 59.337 50.000 0.00 0.00 38.34 3.51
674 675 1.166531 AAGCCGTTTGTGCTCAGTCC 61.167 55.000 0.00 0.00 38.34 3.85
675 676 1.891919 GCCGTTTGTGCTCAGTCCA 60.892 57.895 0.00 0.00 0.00 4.02
676 677 1.237285 GCCGTTTGTGCTCAGTCCAT 61.237 55.000 0.00 0.00 0.00 3.41
677 678 0.518636 CCGTTTGTGCTCAGTCCATG 59.481 55.000 0.00 0.00 0.00 3.66
678 679 1.229428 CGTTTGTGCTCAGTCCATGT 58.771 50.000 0.00 0.00 0.00 3.21
679 680 1.603802 CGTTTGTGCTCAGTCCATGTT 59.396 47.619 0.00 0.00 0.00 2.71
680 681 2.602933 CGTTTGTGCTCAGTCCATGTTG 60.603 50.000 0.00 0.00 0.00 3.33
681 682 1.608055 TTGTGCTCAGTCCATGTTGG 58.392 50.000 0.00 0.00 39.43 3.77
682 683 0.473755 TGTGCTCAGTCCATGTTGGT 59.526 50.000 0.00 0.00 39.03 3.67
683 684 0.877071 GTGCTCAGTCCATGTTGGTG 59.123 55.000 0.00 0.00 39.03 4.17
684 685 0.250858 TGCTCAGTCCATGTTGGTGG 60.251 55.000 0.00 0.00 39.03 4.61
685 686 0.962356 GCTCAGTCCATGTTGGTGGG 60.962 60.000 0.00 0.00 39.03 4.61
686 687 0.962356 CTCAGTCCATGTTGGTGGGC 60.962 60.000 0.00 0.00 44.30 5.36
688 689 4.002797 GTCCATGTTGGTGGGCTC 57.997 61.111 0.00 0.00 40.74 4.70
689 690 2.040544 GTCCATGTTGGTGGGCTCG 61.041 63.158 0.00 0.00 40.74 5.03
690 691 2.034066 CCATGTTGGTGGGCTCGT 59.966 61.111 0.00 0.00 35.55 4.18
691 692 2.334946 CCATGTTGGTGGGCTCGTG 61.335 63.158 0.00 0.00 35.55 4.35
692 693 2.034066 ATGTTGGTGGGCTCGTGG 59.966 61.111 0.00 0.00 0.00 4.94
693 694 4.947147 TGTTGGTGGGCTCGTGGC 62.947 66.667 1.89 1.89 40.90 5.01
702 703 3.851128 GCTCGTGGCCTCCTACCC 61.851 72.222 3.32 0.00 34.27 3.69
703 704 3.155167 CTCGTGGCCTCCTACCCC 61.155 72.222 3.32 0.00 0.00 4.95
704 705 4.791069 TCGTGGCCTCCTACCCCC 62.791 72.222 3.32 0.00 0.00 5.40
718 719 4.856801 CCCCCGCCCATCAACGAG 62.857 72.222 0.00 0.00 0.00 4.18
719 720 3.781307 CCCCGCCCATCAACGAGA 61.781 66.667 0.00 0.00 0.00 4.04
720 721 2.505982 CCCGCCCATCAACGAGAT 59.494 61.111 0.00 0.00 37.48 2.75
721 722 1.595382 CCCGCCCATCAACGAGATC 60.595 63.158 0.00 0.00 33.72 2.75
722 723 1.951130 CCGCCCATCAACGAGATCG 60.951 63.158 0.00 0.00 46.33 3.69
723 724 1.065764 CGCCCATCAACGAGATCGA 59.934 57.895 9.58 0.00 43.02 3.59
724 725 0.527600 CGCCCATCAACGAGATCGAA 60.528 55.000 9.58 0.00 43.02 3.71
725 726 0.931005 GCCCATCAACGAGATCGAAC 59.069 55.000 9.58 0.00 43.02 3.95
726 727 1.571919 CCCATCAACGAGATCGAACC 58.428 55.000 9.58 0.00 43.02 3.62
727 728 1.571919 CCATCAACGAGATCGAACCC 58.428 55.000 9.58 0.00 43.02 4.11
728 729 1.134818 CCATCAACGAGATCGAACCCA 60.135 52.381 9.58 0.00 43.02 4.51
729 730 2.483714 CCATCAACGAGATCGAACCCAT 60.484 50.000 9.58 0.00 43.02 4.00
730 731 2.579207 TCAACGAGATCGAACCCATC 57.421 50.000 9.58 0.00 43.02 3.51
731 732 2.100197 TCAACGAGATCGAACCCATCT 58.900 47.619 9.58 0.00 43.02 2.90
732 733 2.099263 TCAACGAGATCGAACCCATCTC 59.901 50.000 9.58 3.36 42.03 2.75
733 734 1.763968 ACGAGATCGAACCCATCTCA 58.236 50.000 9.58 0.00 44.61 3.27
734 735 1.678627 ACGAGATCGAACCCATCTCAG 59.321 52.381 9.58 7.98 44.61 3.35
735 736 1.950216 CGAGATCGAACCCATCTCAGA 59.050 52.381 12.22 0.00 44.61 3.27
736 737 2.031245 CGAGATCGAACCCATCTCAGAG 60.031 54.545 12.22 0.00 44.61 3.35
737 738 3.218453 GAGATCGAACCCATCTCAGAGA 58.782 50.000 1.54 1.54 44.04 3.10
738 739 3.221771 AGATCGAACCCATCTCAGAGAG 58.778 50.000 6.24 0.00 0.00 3.20
739 740 2.808906 TCGAACCCATCTCAGAGAGA 57.191 50.000 6.24 1.59 43.20 3.10
740 741 3.087370 TCGAACCCATCTCAGAGAGAA 57.913 47.619 6.24 0.00 42.27 2.87
741 742 3.636679 TCGAACCCATCTCAGAGAGAAT 58.363 45.455 6.24 0.00 42.27 2.40
742 743 3.634448 TCGAACCCATCTCAGAGAGAATC 59.366 47.826 6.24 0.00 42.27 2.52
743 744 3.382865 CGAACCCATCTCAGAGAGAATCA 59.617 47.826 6.24 0.00 42.27 2.57
744 745 4.692228 GAACCCATCTCAGAGAGAATCAC 58.308 47.826 6.24 0.00 42.27 3.06
745 746 3.037549 ACCCATCTCAGAGAGAATCACC 58.962 50.000 6.24 0.00 42.27 4.02
746 747 3.307506 CCCATCTCAGAGAGAATCACCT 58.692 50.000 6.24 0.00 42.27 4.00
747 748 3.321682 CCCATCTCAGAGAGAATCACCTC 59.678 52.174 6.24 0.00 42.27 3.85
748 749 3.959449 CCATCTCAGAGAGAATCACCTCA 59.041 47.826 6.24 0.00 42.27 3.86
749 750 4.405036 CCATCTCAGAGAGAATCACCTCAA 59.595 45.833 6.24 0.00 42.27 3.02
750 751 5.105023 CCATCTCAGAGAGAATCACCTCAAA 60.105 44.000 6.24 0.00 42.27 2.69
751 752 6.404708 CATCTCAGAGAGAATCACCTCAAAA 58.595 40.000 6.24 0.00 42.27 2.44
752 753 6.035368 TCTCAGAGAGAATCACCTCAAAAG 57.965 41.667 0.00 1.33 35.59 2.27
753 754 5.777223 TCTCAGAGAGAATCACCTCAAAAGA 59.223 40.000 0.00 3.10 35.59 2.52
754 755 6.268617 TCTCAGAGAGAATCACCTCAAAAGAA 59.731 38.462 0.00 0.00 35.59 2.52
755 756 6.830912 TCAGAGAGAATCACCTCAAAAGAAA 58.169 36.000 5.70 0.00 37.82 2.52
756 757 7.282585 TCAGAGAGAATCACCTCAAAAGAAAA 58.717 34.615 5.70 0.00 37.82 2.29
757 758 7.775093 TCAGAGAGAATCACCTCAAAAGAAAAA 59.225 33.333 5.70 0.00 37.82 1.94
794 795 1.726853 AAAAACGAGATCGAGCCAGG 58.273 50.000 9.58 0.00 43.02 4.45
795 796 0.741221 AAAACGAGATCGAGCCAGGC 60.741 55.000 1.84 1.84 43.02 4.85
796 797 2.579684 AAACGAGATCGAGCCAGGCC 62.580 60.000 8.22 0.00 43.02 5.19
797 798 4.292178 CGAGATCGAGCCAGGCCC 62.292 72.222 8.22 0.00 43.02 5.80
798 799 3.157252 GAGATCGAGCCAGGCCCA 61.157 66.667 8.22 0.00 0.00 5.36
799 800 3.160047 AGATCGAGCCAGGCCCAG 61.160 66.667 8.22 0.00 0.00 4.45
800 801 4.247380 GATCGAGCCAGGCCCAGG 62.247 72.222 8.22 7.48 0.00 4.45
839 840 2.123683 TGCCGGGCCAAACTGAAA 60.124 55.556 17.97 0.00 0.00 2.69
840 841 2.338620 GCCGGGCCAAACTGAAAC 59.661 61.111 8.12 0.00 0.00 2.78
841 842 3.047735 CCGGGCCAAACTGAAACC 58.952 61.111 4.39 0.00 0.00 3.27
848 849 1.106944 CCAAACTGAAACCCCGCACT 61.107 55.000 0.00 0.00 0.00 4.40
873 874 1.389204 CGTCGTCGAAAGTCTCTGCG 61.389 60.000 0.00 0.00 39.71 5.18
989 1006 2.487428 CACTCCAGTCGCCGAGAG 59.513 66.667 0.82 0.82 0.00 3.20
1019 1036 0.959553 ATGGAAGTGTGAGTCGTCGT 59.040 50.000 0.00 0.00 0.00 4.34
1128 1145 4.657824 CCCGCTCGGTCGTGTGTT 62.658 66.667 7.59 0.00 0.00 3.32
1224 1241 4.008933 GTCCTCAGCACCACCGCT 62.009 66.667 0.00 0.00 45.21 5.52
1308 1325 2.043450 CCGAGCTCTCCCCAGTCT 60.043 66.667 12.85 0.00 0.00 3.24
1321 1338 0.949105 CCAGTCTTCCGGTTTCCGTG 60.949 60.000 0.00 0.00 46.80 4.94
1344 1361 0.389166 CCAGATCGCCGCTTATCCTC 60.389 60.000 0.00 0.00 0.00 3.71
1982 2001 8.871125 GGGTCTCCTAATCTTATCTTGAACATA 58.129 37.037 0.00 0.00 0.00 2.29
2006 2025 5.935789 AGCATTCCCACATTGAAATGAAAAG 59.064 36.000 9.94 0.00 39.67 2.27
2013 2032 5.460646 CACATTGAAATGAAAAGGTAGCGT 58.539 37.500 9.94 0.00 39.67 5.07
2136 2160 5.940192 ATTATTGTTTCAGTCACAAGCGA 57.060 34.783 0.00 0.00 37.55 4.93
2258 2283 6.787085 AGAGGAAATTACTTGTGAACTTCG 57.213 37.500 0.00 0.00 0.00 3.79
2314 2341 9.764363 TGTGACATAGGATGTGTATAAATTCTC 57.236 33.333 0.00 0.00 45.03 2.87
2381 2414 7.476667 ACAGTTCGTGATGTTCAAAAATTACA 58.523 30.769 0.00 0.00 0.00 2.41
2525 2558 2.512485 TGCCATTCTTTTGCACACTG 57.488 45.000 0.00 0.00 0.00 3.66
3260 3295 5.126061 GCCTTGTAAGTTGGATGATTGATGT 59.874 40.000 0.00 0.00 0.00 3.06
3544 3600 0.176680 CTTCAGCATCACTAGCGGGT 59.823 55.000 0.00 0.00 37.01 5.28
3566 3622 7.159372 GGGTCATGACTTTGACTTAGTTTCTA 58.841 38.462 24.50 0.00 44.39 2.10
4437 4501 5.295292 GCTACTAATCAGCAGCAAGAATTGA 59.705 40.000 0.00 0.00 43.14 2.57
4555 4619 9.882996 GCTCGATTGATGAAATTATGATTGTTA 57.117 29.630 0.00 0.00 0.00 2.41
4624 4688 4.972751 TGCCATAGTTATGCCTACATGA 57.027 40.909 0.00 0.00 37.04 3.07
4935 5000 1.021390 AAGCTGGCGATCCAAGAACG 61.021 55.000 0.00 0.00 42.91 3.95
4950 5015 0.680061 GAACGGAGGAGGTGTCAACT 59.320 55.000 0.00 0.00 0.00 3.16
5021 5086 9.661563 ATTCTGTAATTTTTCTACGGTGTATCA 57.338 29.630 0.00 0.00 0.00 2.15
5026 5091 5.554822 TTTTTCTACGGTGTATCATTGGC 57.445 39.130 0.00 0.00 0.00 4.52
5129 5194 4.683832 AGATGGTACGATGTAGTTTGAGC 58.316 43.478 0.00 0.00 0.00 4.26
5133 5198 3.612860 GGTACGATGTAGTTTGAGCACAG 59.387 47.826 0.00 0.00 0.00 3.66
5252 5320 9.458374 TTTTTCAATAAACTCGGACTTGAATTC 57.542 29.630 0.00 0.00 36.17 2.17
5290 5358 2.605818 TCGTTATTACAGTTCGCCATGC 59.394 45.455 0.00 0.00 0.00 4.06
5299 5367 2.935849 CAGTTCGCCATGCTATGTGTTA 59.064 45.455 0.00 0.00 0.00 2.41
5357 5425 5.451798 GCTTTTGTTGTGGAAAGGATGAGAA 60.452 40.000 0.00 0.00 34.30 2.87
5433 5501 2.159382 GGCTTTTCGGAAATGTCCAGA 58.841 47.619 15.20 0.00 45.26 3.86
5536 5605 2.205074 CTATTGCTTAGGTCAGTGGCG 58.795 52.381 0.00 0.00 0.00 5.69
5541 5610 1.876416 GCTTAGGTCAGTGGCGTCAAA 60.876 52.381 0.00 0.00 0.00 2.69
5622 5691 0.104304 AACCGTGAGAGCGTGAAAGT 59.896 50.000 0.00 0.00 0.00 2.66
5623 5692 0.318784 ACCGTGAGAGCGTGAAAGTC 60.319 55.000 0.00 0.00 0.00 3.01
5624 5693 0.318699 CCGTGAGAGCGTGAAAGTCA 60.319 55.000 0.00 0.00 0.00 3.41
5625 5694 1.056103 CGTGAGAGCGTGAAAGTCAG 58.944 55.000 0.00 0.00 0.00 3.51
5626 5695 1.423395 GTGAGAGCGTGAAAGTCAGG 58.577 55.000 0.00 0.00 35.54 3.86
5627 5696 1.040646 TGAGAGCGTGAAAGTCAGGT 58.959 50.000 0.51 0.00 34.95 4.00
5628 5697 1.269778 TGAGAGCGTGAAAGTCAGGTG 60.270 52.381 0.51 0.00 34.95 4.00
5629 5698 0.601311 AGAGCGTGAAAGTCAGGTGC 60.601 55.000 0.51 0.00 34.95 5.01
5630 5699 0.601311 GAGCGTGAAAGTCAGGTGCT 60.601 55.000 0.51 0.59 34.95 4.40
5631 5700 0.179045 AGCGTGAAAGTCAGGTGCTT 60.179 50.000 0.51 0.00 34.95 3.91
5632 5701 0.235926 GCGTGAAAGTCAGGTGCTTC 59.764 55.000 0.51 0.00 34.95 3.86
5633 5702 0.868406 CGTGAAAGTCAGGTGCTTCC 59.132 55.000 0.00 0.00 0.00 3.46
5634 5703 1.810031 CGTGAAAGTCAGGTGCTTCCA 60.810 52.381 1.79 0.00 39.02 3.53
5635 5704 2.297701 GTGAAAGTCAGGTGCTTCCAA 58.702 47.619 1.79 0.00 39.02 3.53
5636 5705 2.291741 GTGAAAGTCAGGTGCTTCCAAG 59.708 50.000 1.79 0.00 39.02 3.61
5637 5706 2.092429 TGAAAGTCAGGTGCTTCCAAGT 60.092 45.455 1.79 0.00 39.02 3.16
5638 5707 3.135712 TGAAAGTCAGGTGCTTCCAAGTA 59.864 43.478 1.79 0.00 39.02 2.24
5639 5708 4.202461 TGAAAGTCAGGTGCTTCCAAGTAT 60.202 41.667 1.79 0.00 39.02 2.12
5651 5720 5.934625 TGCTTCCAAGTATTCACTCTCTTTC 59.065 40.000 0.00 0.00 32.29 2.62
5656 5725 7.279615 TCCAAGTATTCACTCTCTTTCAAACA 58.720 34.615 0.00 0.00 32.29 2.83
5665 5734 6.260936 TCACTCTCTTTCAAACAATTCAGGAC 59.739 38.462 0.00 0.00 0.00 3.85
5680 5749 2.158813 TCAGGACGGGAAAATATCAGGC 60.159 50.000 0.00 0.00 0.00 4.85
5681 5750 2.127708 AGGACGGGAAAATATCAGGCT 58.872 47.619 0.00 0.00 0.00 4.58
5682 5751 3.071023 CAGGACGGGAAAATATCAGGCTA 59.929 47.826 0.00 0.00 0.00 3.93
5770 5856 5.239525 CCTTTGAAGAGGTCTGAAATTTCGT 59.760 40.000 13.34 0.00 31.89 3.85
5772 5858 5.924475 TGAAGAGGTCTGAAATTTCGTTC 57.076 39.130 13.34 5.87 0.00 3.95
5773 5859 5.364778 TGAAGAGGTCTGAAATTTCGTTCA 58.635 37.500 13.34 9.74 36.15 3.18
5780 5866 1.885887 TGAAATTTCGTTCAGGCCCAG 59.114 47.619 13.34 0.00 32.56 4.45
5784 5870 1.415672 TTTCGTTCAGGCCCAGAGGT 61.416 55.000 0.00 0.00 34.57 3.85
5786 5872 1.376037 CGTTCAGGCCCAGAGGTTC 60.376 63.158 0.00 0.00 34.57 3.62
5790 5876 2.041265 AGGCCCAGAGGTTCCGAT 59.959 61.111 0.00 0.00 34.57 4.18
5808 5894 1.789464 GATGCTCATCGTTCGATCCAC 59.211 52.381 4.67 0.00 0.00 4.02
5823 5910 2.359354 CACGATCCAACGGCCCAA 60.359 61.111 0.00 0.00 37.61 4.12
5826 5913 1.376683 CGATCCAACGGCCCAAGAA 60.377 57.895 0.00 0.00 0.00 2.52
5831 5918 1.971695 CAACGGCCCAAGAACTCCC 60.972 63.158 0.00 0.00 0.00 4.30
5832 5919 2.457323 AACGGCCCAAGAACTCCCA 61.457 57.895 0.00 0.00 0.00 4.37
5837 5924 1.494721 GGCCCAAGAACTCCCATATCA 59.505 52.381 0.00 0.00 0.00 2.15
5854 5941 1.755395 CATGGGTGCATGGGAGTGG 60.755 63.158 0.00 0.00 0.00 4.00
5865 5952 1.668826 TGGGAGTGGTAGGAGCAAAT 58.331 50.000 0.00 0.00 0.00 2.32
5871 5958 5.059833 GGAGTGGTAGGAGCAAATTCTATG 58.940 45.833 0.00 0.00 0.00 2.23
5873 5960 6.313519 AGTGGTAGGAGCAAATTCTATGAA 57.686 37.500 0.00 0.00 0.00 2.57
5875 5962 6.995091 AGTGGTAGGAGCAAATTCTATGAATC 59.005 38.462 0.00 0.00 0.00 2.52
5878 5965 8.150945 TGGTAGGAGCAAATTCTATGAATCTAC 58.849 37.037 0.00 0.00 0.00 2.59
5879 5966 8.371699 GGTAGGAGCAAATTCTATGAATCTACT 58.628 37.037 0.00 6.23 0.00 2.57
5880 5967 9.771534 GTAGGAGCAAATTCTATGAATCTACTT 57.228 33.333 0.00 0.00 0.00 2.24
5881 5968 8.900983 AGGAGCAAATTCTATGAATCTACTTC 57.099 34.615 0.00 0.00 0.00 3.01
5884 5971 9.323985 GAGCAAATTCTATGAATCTACTTCAGT 57.676 33.333 0.00 0.00 46.71 3.41
5885 5972 9.678260 AGCAAATTCTATGAATCTACTTCAGTT 57.322 29.630 0.00 0.00 46.71 3.16
5886 5973 9.713740 GCAAATTCTATGAATCTACTTCAGTTG 57.286 33.333 0.00 0.00 46.71 3.16
5907 6013 0.108019 AAACTTGGTCACGGTCTCCC 59.892 55.000 0.00 0.00 0.00 4.30
5909 6015 0.763223 ACTTGGTCACGGTCTCCCTT 60.763 55.000 0.00 0.00 0.00 3.95
5911 6017 1.204941 CTTGGTCACGGTCTCCCTTAG 59.795 57.143 0.00 0.00 0.00 2.18
5945 6051 1.810532 CACTCTCGTCCTGTAGGCC 59.189 63.158 0.00 0.00 34.44 5.19
5953 6059 2.746277 CCTGTAGGCCGCAACACC 60.746 66.667 0.00 0.00 0.00 4.16
5967 6077 2.223618 GCAACACCTTGTAGCGGAAAAA 60.224 45.455 0.00 0.00 0.00 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 1.211743 GTTCGGTTTTCTCGTCCGTT 58.788 50.000 0.00 0.00 43.94 4.44
2 3 0.598419 GGTTCGGTTTTCTCGTCCGT 60.598 55.000 0.00 0.00 43.94 4.69
3 4 0.598158 TGGTTCGGTTTTCTCGTCCG 60.598 55.000 0.00 0.00 44.76 4.79
4 5 1.145803 CTGGTTCGGTTTTCTCGTCC 58.854 55.000 0.00 0.00 0.00 4.79
5 6 1.145803 CCTGGTTCGGTTTTCTCGTC 58.854 55.000 0.00 0.00 0.00 4.20
6 7 0.754472 TCCTGGTTCGGTTTTCTCGT 59.246 50.000 0.00 0.00 0.00 4.18
7 8 1.429463 CTCCTGGTTCGGTTTTCTCG 58.571 55.000 0.00 0.00 0.00 4.04
8 9 1.157585 GCTCCTGGTTCGGTTTTCTC 58.842 55.000 0.00 0.00 0.00 2.87
9 10 0.472471 TGCTCCTGGTTCGGTTTTCT 59.528 50.000 0.00 0.00 0.00 2.52
10 11 1.200020 CATGCTCCTGGTTCGGTTTTC 59.800 52.381 0.00 0.00 0.00 2.29
11 12 1.247567 CATGCTCCTGGTTCGGTTTT 58.752 50.000 0.00 0.00 0.00 2.43
12 13 0.609131 CCATGCTCCTGGTTCGGTTT 60.609 55.000 0.00 0.00 0.00 3.27
13 14 1.002134 CCATGCTCCTGGTTCGGTT 60.002 57.895 0.00 0.00 0.00 4.44
14 15 2.671070 CCATGCTCCTGGTTCGGT 59.329 61.111 0.00 0.00 0.00 4.69
15 16 2.124570 CCCATGCTCCTGGTTCGG 60.125 66.667 0.00 0.00 34.23 4.30
16 17 0.609131 AAACCCATGCTCCTGGTTCG 60.609 55.000 4.10 0.00 41.40 3.95
17 18 1.632589 AAAACCCATGCTCCTGGTTC 58.367 50.000 4.10 0.00 41.40 3.62
18 19 2.101640 AAAAACCCATGCTCCTGGTT 57.898 45.000 0.00 0.00 44.04 3.67
19 20 3.869493 AAAAACCCATGCTCCTGGT 57.131 47.368 0.00 0.00 34.23 4.00
34 35 2.626266 GCCTCTTTCGGAAAGGGAAAAA 59.374 45.455 27.71 9.07 41.66 1.94
35 36 2.235891 GCCTCTTTCGGAAAGGGAAAA 58.764 47.619 27.71 9.72 41.66 2.29
36 37 1.144093 TGCCTCTTTCGGAAAGGGAAA 59.856 47.619 27.71 14.52 41.66 3.13
37 38 0.768622 TGCCTCTTTCGGAAAGGGAA 59.231 50.000 27.71 19.29 41.66 3.97
38 39 0.036306 GTGCCTCTTTCGGAAAGGGA 59.964 55.000 27.71 14.21 41.66 4.20
39 40 1.298859 CGTGCCTCTTTCGGAAAGGG 61.299 60.000 25.66 23.41 38.75 3.95
40 41 1.912371 GCGTGCCTCTTTCGGAAAGG 61.912 60.000 25.66 15.57 39.01 3.11
41 42 1.497722 GCGTGCCTCTTTCGGAAAG 59.502 57.895 21.64 21.64 39.88 2.62
42 43 1.964373 GGCGTGCCTCTTTCGGAAA 60.964 57.895 2.98 2.78 0.00 3.13
43 44 2.358247 GGCGTGCCTCTTTCGGAA 60.358 61.111 2.98 0.00 0.00 4.30
44 45 4.388499 GGGCGTGCCTCTTTCGGA 62.388 66.667 11.25 0.00 36.10 4.55
47 48 3.423154 CACGGGCGTGCCTCTTTC 61.423 66.667 11.25 0.00 39.39 2.62
62 63 1.795768 TGTGATTTCGTGAGAGGCAC 58.204 50.000 0.00 0.00 43.69 5.01
63 64 2.143122 GTTGTGATTTCGTGAGAGGCA 58.857 47.619 0.00 0.00 43.69 4.75
64 65 1.464997 GGTTGTGATTTCGTGAGAGGC 59.535 52.381 0.00 0.00 43.69 4.70
65 66 1.726791 CGGTTGTGATTTCGTGAGAGG 59.273 52.381 0.00 0.00 43.69 3.69
66 67 2.404215 ACGGTTGTGATTTCGTGAGAG 58.596 47.619 0.00 0.00 43.69 3.20
67 68 2.519377 ACGGTTGTGATTTCGTGAGA 57.481 45.000 0.00 0.00 34.40 3.27
84 85 2.537792 TTACTTCCGCGAGAGGCACG 62.538 60.000 8.23 0.00 43.84 5.34
85 86 0.389426 TTTACTTCCGCGAGAGGCAC 60.389 55.000 8.23 0.00 43.84 5.01
86 87 0.319083 TTTTACTTCCGCGAGAGGCA 59.681 50.000 8.23 0.00 43.84 4.75
87 88 0.720027 GTTTTACTTCCGCGAGAGGC 59.280 55.000 8.23 0.00 38.69 4.70
88 89 1.356938 GGTTTTACTTCCGCGAGAGG 58.643 55.000 8.23 6.41 0.00 3.69
89 90 0.989890 CGGTTTTACTTCCGCGAGAG 59.010 55.000 8.23 7.50 40.28 3.20
90 91 3.111536 CGGTTTTACTTCCGCGAGA 57.888 52.632 8.23 0.00 40.28 4.04
96 97 2.420642 GGGAGTCACGGTTTTACTTCC 58.579 52.381 0.00 0.00 31.80 3.46
97 98 2.064014 CGGGAGTCACGGTTTTACTTC 58.936 52.381 6.97 0.00 0.00 3.01
98 99 1.875157 GCGGGAGTCACGGTTTTACTT 60.875 52.381 18.04 0.00 0.00 2.24
99 100 0.320160 GCGGGAGTCACGGTTTTACT 60.320 55.000 18.04 0.00 0.00 2.24
100 101 1.620413 CGCGGGAGTCACGGTTTTAC 61.620 60.000 18.04 0.00 0.00 2.01
101 102 1.373246 CGCGGGAGTCACGGTTTTA 60.373 57.895 18.04 0.00 0.00 1.52
102 103 2.647680 TTCGCGGGAGTCACGGTTTT 62.648 55.000 18.04 0.00 0.00 2.43
103 104 2.647680 TTTCGCGGGAGTCACGGTTT 62.648 55.000 18.04 0.00 0.00 3.27
104 105 3.154584 TTTCGCGGGAGTCACGGTT 62.155 57.895 18.04 0.00 0.00 4.44
105 106 3.569049 CTTTCGCGGGAGTCACGGT 62.569 63.158 18.04 0.00 0.00 4.83
106 107 2.758770 TTCTTTCGCGGGAGTCACGG 62.759 60.000 18.04 6.93 0.00 4.94
107 108 0.942410 TTTCTTTCGCGGGAGTCACG 60.942 55.000 11.33 11.33 0.00 4.35
108 109 1.223187 TTTTCTTTCGCGGGAGTCAC 58.777 50.000 6.13 0.00 0.00 3.67
109 110 1.956297 TTTTTCTTTCGCGGGAGTCA 58.044 45.000 6.13 0.00 0.00 3.41
150 151 3.733960 TCACGGCCGTGTCTCTCG 61.734 66.667 46.56 27.35 45.55 4.04
151 152 2.126424 GTCACGGCCGTGTCTCTC 60.126 66.667 46.56 30.56 45.55 3.20
152 153 2.597805 AGTCACGGCCGTGTCTCT 60.598 61.111 46.56 37.63 45.55 3.10
154 155 2.597805 AGAGTCACGGCCGTGTCT 60.598 61.111 43.83 43.83 44.52 3.41
155 156 2.126424 GAGAGTCACGGCCGTGTC 60.126 66.667 46.56 41.99 45.55 3.67
156 157 2.597805 AGAGAGTCACGGCCGTGT 60.598 61.111 46.56 34.60 45.55 4.49
157 158 2.179517 GAGAGAGTCACGGCCGTG 59.820 66.667 45.04 45.04 46.64 4.94
158 159 3.432588 CGAGAGAGTCACGGCCGT 61.433 66.667 28.70 28.70 0.00 5.68
159 160 4.838486 GCGAGAGAGTCACGGCCG 62.838 72.222 26.86 26.86 31.23 6.13
160 161 4.838486 CGCGAGAGAGTCACGGCC 62.838 72.222 0.00 0.00 31.23 6.13
161 162 2.797866 TTTCGCGAGAGAGTCACGGC 62.798 60.000 9.59 0.00 43.69 5.68
162 163 0.794981 CTTTCGCGAGAGAGTCACGG 60.795 60.000 21.21 0.00 43.69 4.94
163 164 0.166161 TCTTTCGCGAGAGAGTCACG 59.834 55.000 23.95 0.00 42.50 4.35
164 165 2.333389 TTCTTTCGCGAGAGAGTCAC 57.667 50.000 25.80 0.00 42.50 3.67
165 166 3.364889 TTTTCTTTCGCGAGAGAGTCA 57.635 42.857 25.80 11.82 42.50 3.41
166 167 3.489785 TGTTTTTCTTTCGCGAGAGAGTC 59.510 43.478 25.80 17.80 42.50 3.36
167 168 3.454375 TGTTTTTCTTTCGCGAGAGAGT 58.546 40.909 25.80 0.00 42.50 3.24
168 169 3.736252 TCTGTTTTTCTTTCGCGAGAGAG 59.264 43.478 25.80 17.24 43.21 3.20
169 170 3.713288 TCTGTTTTTCTTTCGCGAGAGA 58.287 40.909 23.95 23.95 43.69 3.10
170 171 4.452890 TTCTGTTTTTCTTTCGCGAGAG 57.547 40.909 19.89 19.89 43.69 3.20
171 172 4.868450 TTTCTGTTTTTCTTTCGCGAGA 57.132 36.364 9.59 3.35 39.20 4.04
172 173 4.791163 TGTTTTCTGTTTTTCTTTCGCGAG 59.209 37.500 9.59 0.00 0.00 5.03
173 174 4.555747 GTGTTTTCTGTTTTTCTTTCGCGA 59.444 37.500 3.71 3.71 0.00 5.87
174 175 4.543658 CGTGTTTTCTGTTTTTCTTTCGCG 60.544 41.667 0.00 0.00 0.00 5.87
175 176 4.322539 ACGTGTTTTCTGTTTTTCTTTCGC 59.677 37.500 0.00 0.00 0.00 4.70
176 177 5.985526 ACGTGTTTTCTGTTTTTCTTTCG 57.014 34.783 0.00 0.00 0.00 3.46
177 178 8.981370 AAAAACGTGTTTTCTGTTTTTCTTTC 57.019 26.923 10.83 0.00 46.91 2.62
210 211 3.129502 TCACGGCCGTACCTCTCG 61.130 66.667 33.70 17.31 35.61 4.04
211 212 1.991099 GAGTCACGGCCGTACCTCTC 61.991 65.000 32.95 28.55 35.61 3.20
212 213 2.035312 AGTCACGGCCGTACCTCT 59.965 61.111 33.70 22.10 35.61 3.69
213 214 1.991099 GAGAGTCACGGCCGTACCTC 61.991 65.000 33.12 33.12 35.61 3.85
214 215 2.035312 AGAGTCACGGCCGTACCT 59.965 61.111 33.70 28.14 35.61 3.08
215 216 2.488820 GAGAGTCACGGCCGTACC 59.511 66.667 33.70 23.72 0.00 3.34
216 217 2.099831 CGAGAGTCACGGCCGTAC 59.900 66.667 33.70 26.66 0.00 3.67
217 218 3.807538 GCGAGAGTCACGGCCGTA 61.808 66.667 33.70 16.87 0.00 4.02
221 222 4.415332 TTCCGCGAGAGTCACGGC 62.415 66.667 8.23 3.61 46.49 5.68
223 224 0.377554 ATACTTCCGCGAGAGTCACG 59.622 55.000 8.23 5.53 0.00 4.35
224 225 3.361414 GTTATACTTCCGCGAGAGTCAC 58.639 50.000 8.23 5.47 0.00 3.67
225 226 2.357009 GGTTATACTTCCGCGAGAGTCA 59.643 50.000 8.23 0.00 0.00 3.41
226 227 2.601741 CGGTTATACTTCCGCGAGAGTC 60.602 54.545 8.23 0.00 40.28 3.36
227 228 1.332997 CGGTTATACTTCCGCGAGAGT 59.667 52.381 8.23 13.72 40.28 3.24
228 229 2.033793 CGGTTATACTTCCGCGAGAG 57.966 55.000 8.23 7.50 40.28 3.20
235 236 2.543238 CGAGAGGCACGGTTATACTTCC 60.543 54.545 0.00 0.00 0.00 3.46
236 237 2.728922 CGAGAGGCACGGTTATACTTC 58.271 52.381 0.00 0.00 0.00 3.01
237 238 1.202382 GCGAGAGGCACGGTTATACTT 60.202 52.381 0.00 0.00 42.87 2.24
238 239 0.384669 GCGAGAGGCACGGTTATACT 59.615 55.000 0.00 0.00 42.87 2.12
239 240 0.933509 CGCGAGAGGCACGGTTATAC 60.934 60.000 0.00 0.00 43.84 1.47
240 241 1.096967 TCGCGAGAGGCACGGTTATA 61.097 55.000 3.71 0.00 43.84 0.98
241 242 1.940883 TTCGCGAGAGGCACGGTTAT 61.941 55.000 9.59 0.00 43.84 1.89
242 243 2.144833 TTTCGCGAGAGGCACGGTTA 62.145 55.000 9.59 0.00 43.84 2.85
243 244 3.509137 TTTCGCGAGAGGCACGGTT 62.509 57.895 9.59 0.00 43.84 4.44
244 245 3.916392 CTTTCGCGAGAGGCACGGT 62.916 63.158 18.35 0.00 43.84 4.83
245 246 3.181967 CTTTCGCGAGAGGCACGG 61.182 66.667 18.35 0.00 43.84 4.94
246 247 3.843240 GCTTTCGCGAGAGGCACG 61.843 66.667 25.84 3.72 43.84 5.34
247 248 1.841663 TTTGCTTTCGCGAGAGGCAC 61.842 55.000 25.84 11.56 45.26 5.01
248 249 1.163420 TTTTGCTTTCGCGAGAGGCA 61.163 50.000 25.84 23.78 44.45 4.75
249 250 0.726118 GTTTTGCTTTCGCGAGAGGC 60.726 55.000 25.84 21.76 43.69 4.70
250 251 0.110192 GGTTTTGCTTTCGCGAGAGG 60.110 55.000 25.84 13.55 43.69 3.69
251 252 0.586319 TGGTTTTGCTTTCGCGAGAG 59.414 50.000 21.42 21.42 43.69 3.20
252 253 1.069296 CATGGTTTTGCTTTCGCGAGA 60.069 47.619 9.59 3.35 39.65 4.04
253 254 1.069296 TCATGGTTTTGCTTTCGCGAG 60.069 47.619 9.59 0.00 39.65 5.03
254 255 0.947960 TCATGGTTTTGCTTTCGCGA 59.052 45.000 3.71 3.71 39.65 5.87
255 256 1.052287 GTCATGGTTTTGCTTTCGCG 58.948 50.000 0.00 0.00 39.65 5.87
256 257 2.030805 AGAGTCATGGTTTTGCTTTCGC 60.031 45.455 0.00 0.00 0.00 4.70
257 258 3.665323 CGAGAGTCATGGTTTTGCTTTCG 60.665 47.826 0.00 0.00 0.00 3.46
258 259 3.814945 CGAGAGTCATGGTTTTGCTTTC 58.185 45.455 0.00 0.00 0.00 2.62
259 260 2.030805 GCGAGAGTCATGGTTTTGCTTT 60.031 45.455 0.00 0.00 0.00 3.51
260 261 1.537202 GCGAGAGTCATGGTTTTGCTT 59.463 47.619 0.00 0.00 0.00 3.91
261 262 1.160137 GCGAGAGTCATGGTTTTGCT 58.840 50.000 0.00 0.00 0.00 3.91
262 263 0.179215 CGCGAGAGTCATGGTTTTGC 60.179 55.000 0.00 0.00 0.00 3.68
263 264 1.428448 TCGCGAGAGTCATGGTTTTG 58.572 50.000 3.71 0.00 34.84 2.44
264 265 2.163818 TTCGCGAGAGTCATGGTTTT 57.836 45.000 9.59 0.00 43.69 2.43
265 266 2.069273 CTTTCGCGAGAGTCATGGTTT 58.931 47.619 17.92 0.00 43.69 3.27
266 267 1.272490 TCTTTCGCGAGAGTCATGGTT 59.728 47.619 24.05 0.00 43.69 3.67
267 268 0.888619 TCTTTCGCGAGAGTCATGGT 59.111 50.000 24.05 0.00 43.69 3.55
268 269 1.996292 TTCTTTCGCGAGAGTCATGG 58.004 50.000 24.05 0.86 43.69 3.66
269 270 4.389664 TTTTTCTTTCGCGAGAGTCATG 57.610 40.909 24.05 5.51 43.69 3.07
289 290 4.812091 GGGGAAAATGCGTTTACTGTTTTT 59.188 37.500 3.90 0.00 29.85 1.94
290 291 4.373527 GGGGAAAATGCGTTTACTGTTTT 58.626 39.130 3.90 0.00 29.85 2.43
291 292 3.551250 CGGGGAAAATGCGTTTACTGTTT 60.551 43.478 3.90 0.00 29.85 2.83
292 293 2.030628 CGGGGAAAATGCGTTTACTGTT 60.031 45.455 3.90 0.00 29.85 3.16
293 294 1.538075 CGGGGAAAATGCGTTTACTGT 59.462 47.619 3.90 0.00 29.85 3.55
294 295 1.538075 ACGGGGAAAATGCGTTTACTG 59.462 47.619 3.90 6.19 29.85 2.74
295 296 1.900245 ACGGGGAAAATGCGTTTACT 58.100 45.000 3.90 0.00 29.85 2.24
296 297 2.710220 AACGGGGAAAATGCGTTTAC 57.290 45.000 3.90 0.98 0.00 2.01
297 298 2.030096 GGAAACGGGGAAAATGCGTTTA 60.030 45.455 3.90 0.00 33.72 2.01
298 299 1.269883 GGAAACGGGGAAAATGCGTTT 60.270 47.619 0.00 0.00 35.82 3.60
299 300 0.315886 GGAAACGGGGAAAATGCGTT 59.684 50.000 0.00 0.00 0.00 4.84
300 301 1.961378 GGAAACGGGGAAAATGCGT 59.039 52.632 0.00 0.00 0.00 5.24
301 302 4.880899 GGAAACGGGGAAAATGCG 57.119 55.556 0.00 0.00 0.00 4.73
313 314 0.449388 CAGCCATGCTTCTCGGAAAC 59.551 55.000 0.00 0.00 36.40 2.78
314 315 0.036732 ACAGCCATGCTTCTCGGAAA 59.963 50.000 0.00 0.00 36.40 3.13
315 316 0.674581 CACAGCCATGCTTCTCGGAA 60.675 55.000 0.00 0.00 36.40 4.30
316 317 1.078918 CACAGCCATGCTTCTCGGA 60.079 57.895 0.00 0.00 36.40 4.55
317 318 0.463295 ATCACAGCCATGCTTCTCGG 60.463 55.000 0.00 0.00 36.40 4.63
318 319 1.329906 GAATCACAGCCATGCTTCTCG 59.670 52.381 0.00 0.00 36.40 4.04
319 320 2.613133 GAGAATCACAGCCATGCTTCTC 59.387 50.000 12.86 12.86 32.63 2.87
320 321 2.026542 TGAGAATCACAGCCATGCTTCT 60.027 45.455 4.12 4.12 42.56 2.85
321 322 2.362736 TGAGAATCACAGCCATGCTTC 58.637 47.619 0.00 0.00 42.56 3.86
322 323 2.502142 TGAGAATCACAGCCATGCTT 57.498 45.000 0.00 0.00 42.56 3.91
337 338 1.658994 ACGGTTTTGCTTTCGTGAGA 58.341 45.000 0.00 0.00 34.40 3.27
338 339 2.349155 GGTACGGTTTTGCTTTCGTGAG 60.349 50.000 0.00 0.00 37.10 3.51
339 340 1.598601 GGTACGGTTTTGCTTTCGTGA 59.401 47.619 0.00 0.00 37.10 4.35
340 341 1.600485 AGGTACGGTTTTGCTTTCGTG 59.400 47.619 0.00 0.00 37.10 4.35
341 342 1.869132 GAGGTACGGTTTTGCTTTCGT 59.131 47.619 0.00 0.00 39.30 3.85
342 343 2.140717 AGAGGTACGGTTTTGCTTTCG 58.859 47.619 0.00 0.00 0.00 3.46
343 344 3.059120 GTGAGAGGTACGGTTTTGCTTTC 60.059 47.826 0.00 0.00 0.00 2.62
344 345 2.876550 GTGAGAGGTACGGTTTTGCTTT 59.123 45.455 0.00 0.00 0.00 3.51
345 346 2.490991 GTGAGAGGTACGGTTTTGCTT 58.509 47.619 0.00 0.00 0.00 3.91
346 347 1.604693 CGTGAGAGGTACGGTTTTGCT 60.605 52.381 0.00 0.00 37.86 3.91
347 348 0.788391 CGTGAGAGGTACGGTTTTGC 59.212 55.000 0.00 0.00 37.86 3.68
348 349 2.427232 TCGTGAGAGGTACGGTTTTG 57.573 50.000 0.00 0.00 41.58 2.44
349 350 2.865276 GCTTCGTGAGAGGTACGGTTTT 60.865 50.000 0.00 0.00 43.69 2.43
350 351 1.336609 GCTTCGTGAGAGGTACGGTTT 60.337 52.381 0.00 0.00 43.69 3.27
351 352 0.243095 GCTTCGTGAGAGGTACGGTT 59.757 55.000 0.00 0.00 43.69 4.44
352 353 0.892358 TGCTTCGTGAGAGGTACGGT 60.892 55.000 0.00 0.00 43.69 4.83
353 354 0.242825 TTGCTTCGTGAGAGGTACGG 59.757 55.000 0.00 0.00 43.69 4.02
354 355 2.060326 TTTGCTTCGTGAGAGGTACG 57.940 50.000 0.00 0.00 43.69 3.67
355 356 2.479275 GGTTTTGCTTCGTGAGAGGTAC 59.521 50.000 0.00 0.00 43.69 3.34
356 357 2.103432 TGGTTTTGCTTCGTGAGAGGTA 59.897 45.455 0.00 0.00 43.69 3.08
357 358 1.134220 TGGTTTTGCTTCGTGAGAGGT 60.134 47.619 0.00 0.00 43.69 3.85
358 359 1.593196 TGGTTTTGCTTCGTGAGAGG 58.407 50.000 0.00 0.00 43.69 3.69
359 360 2.807967 TCATGGTTTTGCTTCGTGAGAG 59.192 45.455 0.00 0.00 43.69 3.20
360 361 2.548057 GTCATGGTTTTGCTTCGTGAGA 59.452 45.455 0.00 0.00 39.20 3.27
361 362 2.549754 AGTCATGGTTTTGCTTCGTGAG 59.450 45.455 0.00 0.00 0.00 3.51
362 363 2.548057 GAGTCATGGTTTTGCTTCGTGA 59.452 45.455 0.00 0.00 0.00 4.35
363 364 2.549754 AGAGTCATGGTTTTGCTTCGTG 59.450 45.455 0.00 0.00 0.00 4.35
364 365 2.808543 GAGAGTCATGGTTTTGCTTCGT 59.191 45.455 0.00 0.00 0.00 3.85
365 366 2.159787 CGAGAGTCATGGTTTTGCTTCG 60.160 50.000 0.00 0.00 0.00 3.79
366 367 2.413371 GCGAGAGTCATGGTTTTGCTTC 60.413 50.000 0.00 0.00 0.00 3.86
367 368 1.537202 GCGAGAGTCATGGTTTTGCTT 59.463 47.619 0.00 0.00 0.00 3.91
368 369 1.160137 GCGAGAGTCATGGTTTTGCT 58.840 50.000 0.00 0.00 0.00 3.91
369 370 0.874390 TGCGAGAGTCATGGTTTTGC 59.126 50.000 0.00 0.00 0.00 3.68
370 371 3.624326 TTTGCGAGAGTCATGGTTTTG 57.376 42.857 0.00 0.00 0.00 2.44
371 372 3.004734 CCTTTTGCGAGAGTCATGGTTTT 59.995 43.478 0.00 0.00 0.00 2.43
372 373 2.554032 CCTTTTGCGAGAGTCATGGTTT 59.446 45.455 0.00 0.00 0.00 3.27
373 374 2.154462 CCTTTTGCGAGAGTCATGGTT 58.846 47.619 0.00 0.00 0.00 3.67
374 375 1.611673 CCCTTTTGCGAGAGTCATGGT 60.612 52.381 0.00 0.00 0.00 3.55
375 376 1.089920 CCCTTTTGCGAGAGTCATGG 58.910 55.000 0.00 0.00 0.00 3.66
376 377 1.089920 CCCCTTTTGCGAGAGTCATG 58.910 55.000 0.00 0.00 0.00 3.07
377 378 0.035056 CCCCCTTTTGCGAGAGTCAT 60.035 55.000 0.00 0.00 0.00 3.06
378 379 1.374947 CCCCCTTTTGCGAGAGTCA 59.625 57.895 0.00 0.00 0.00 3.41
379 380 4.303257 CCCCCTTTTGCGAGAGTC 57.697 61.111 0.00 0.00 0.00 3.36
393 394 0.386476 ACGCGTTTTCTTTTTCCCCC 59.614 50.000 5.58 0.00 0.00 5.40
394 395 2.212869 AACGCGTTTTCTTTTTCCCC 57.787 45.000 20.79 0.00 0.00 4.81
395 396 4.587211 AAAAACGCGTTTTCTTTTTCCC 57.413 36.364 40.39 0.00 41.45 3.97
437 438 7.308951 CGGTCTTCCCTAGCTTTTGATTAAAAA 60.309 37.037 0.00 0.00 35.50 1.94
438 439 6.150474 CGGTCTTCCCTAGCTTTTGATTAAAA 59.850 38.462 0.00 0.00 34.75 1.52
439 440 5.646360 CGGTCTTCCCTAGCTTTTGATTAAA 59.354 40.000 0.00 0.00 0.00 1.52
440 441 5.183228 CGGTCTTCCCTAGCTTTTGATTAA 58.817 41.667 0.00 0.00 0.00 1.40
441 442 4.383770 CCGGTCTTCCCTAGCTTTTGATTA 60.384 45.833 0.00 0.00 0.00 1.75
442 443 3.610911 CGGTCTTCCCTAGCTTTTGATT 58.389 45.455 0.00 0.00 0.00 2.57
443 444 2.092914 CCGGTCTTCCCTAGCTTTTGAT 60.093 50.000 0.00 0.00 0.00 2.57
444 445 1.278127 CCGGTCTTCCCTAGCTTTTGA 59.722 52.381 0.00 0.00 0.00 2.69
445 446 1.003233 ACCGGTCTTCCCTAGCTTTTG 59.997 52.381 0.00 0.00 0.00 2.44
446 447 1.003233 CACCGGTCTTCCCTAGCTTTT 59.997 52.381 2.59 0.00 0.00 2.27
447 448 0.613777 CACCGGTCTTCCCTAGCTTT 59.386 55.000 2.59 0.00 0.00 3.51
448 449 1.265454 CCACCGGTCTTCCCTAGCTT 61.265 60.000 2.59 0.00 0.00 3.74
449 450 1.686110 CCACCGGTCTTCCCTAGCT 60.686 63.158 2.59 0.00 0.00 3.32
450 451 1.262640 TTCCACCGGTCTTCCCTAGC 61.263 60.000 2.59 0.00 0.00 3.42
451 452 1.272807 TTTCCACCGGTCTTCCCTAG 58.727 55.000 2.59 0.00 0.00 3.02
452 453 1.732117 TTTTCCACCGGTCTTCCCTA 58.268 50.000 2.59 0.00 0.00 3.53
453 454 1.004394 GATTTTCCACCGGTCTTCCCT 59.996 52.381 2.59 0.00 0.00 4.20
454 455 1.271707 TGATTTTCCACCGGTCTTCCC 60.272 52.381 2.59 0.00 0.00 3.97
455 456 2.194201 TGATTTTCCACCGGTCTTCC 57.806 50.000 2.59 0.00 0.00 3.46
456 457 4.295870 GTTTTGATTTTCCACCGGTCTTC 58.704 43.478 2.59 0.00 0.00 2.87
457 458 3.243267 CGTTTTGATTTTCCACCGGTCTT 60.243 43.478 2.59 0.00 0.00 3.01
458 459 2.292292 CGTTTTGATTTTCCACCGGTCT 59.708 45.455 2.59 0.00 0.00 3.85
459 460 2.033675 ACGTTTTGATTTTCCACCGGTC 59.966 45.455 2.59 0.00 0.00 4.79
460 461 2.025898 ACGTTTTGATTTTCCACCGGT 58.974 42.857 0.00 0.00 0.00 5.28
461 462 2.657184 GACGTTTTGATTTTCCACCGG 58.343 47.619 0.00 0.00 0.00 5.28
462 463 2.032722 TCGACGTTTTGATTTTCCACCG 60.033 45.455 0.00 0.00 0.00 4.94
463 464 3.612472 TCGACGTTTTGATTTTCCACC 57.388 42.857 0.00 0.00 0.00 4.61
464 465 5.935448 TTTTCGACGTTTTGATTTTCCAC 57.065 34.783 0.00 0.00 0.00 4.02
484 485 7.324178 GTTTTTGGCCTTTTTAATGGGTTTTT 58.676 30.769 3.32 0.00 0.00 1.94
485 486 6.404844 CGTTTTTGGCCTTTTTAATGGGTTTT 60.405 34.615 3.32 0.00 0.00 2.43
486 487 5.066634 CGTTTTTGGCCTTTTTAATGGGTTT 59.933 36.000 3.32 0.00 0.00 3.27
487 488 4.576873 CGTTTTTGGCCTTTTTAATGGGTT 59.423 37.500 3.32 0.00 0.00 4.11
488 489 4.130857 CGTTTTTGGCCTTTTTAATGGGT 58.869 39.130 3.32 0.00 0.00 4.51
489 490 3.058570 GCGTTTTTGGCCTTTTTAATGGG 60.059 43.478 3.32 0.00 0.00 4.00
490 491 3.363477 CGCGTTTTTGGCCTTTTTAATGG 60.363 43.478 3.32 0.00 0.00 3.16
491 492 3.246463 ACGCGTTTTTGGCCTTTTTAATG 59.754 39.130 5.58 0.00 0.00 1.90
492 493 3.246463 CACGCGTTTTTGGCCTTTTTAAT 59.754 39.130 10.22 0.00 0.00 1.40
493 494 2.603560 CACGCGTTTTTGGCCTTTTTAA 59.396 40.909 10.22 0.00 0.00 1.52
494 495 2.194271 CACGCGTTTTTGGCCTTTTTA 58.806 42.857 10.22 0.00 0.00 1.52
495 496 1.003108 CACGCGTTTTTGGCCTTTTT 58.997 45.000 10.22 0.00 0.00 1.94
496 497 1.425267 GCACGCGTTTTTGGCCTTTT 61.425 50.000 10.22 0.00 0.00 2.27
497 498 1.880796 GCACGCGTTTTTGGCCTTT 60.881 52.632 10.22 0.00 0.00 3.11
498 499 2.279186 GCACGCGTTTTTGGCCTT 60.279 55.556 10.22 0.00 0.00 4.35
499 500 2.564553 TTTGCACGCGTTTTTGGCCT 62.565 50.000 10.22 0.00 0.00 5.19
500 501 1.696832 TTTTGCACGCGTTTTTGGCC 61.697 50.000 10.22 0.00 0.00 5.36
501 502 0.095417 TTTTTGCACGCGTTTTTGGC 59.905 45.000 10.22 10.82 0.00 4.52
526 527 3.888930 TGCTCCCTTCGAATTCTGTTTTT 59.111 39.130 0.00 0.00 0.00 1.94
527 528 3.253432 GTGCTCCCTTCGAATTCTGTTTT 59.747 43.478 0.00 0.00 0.00 2.43
528 529 2.814336 GTGCTCCCTTCGAATTCTGTTT 59.186 45.455 0.00 0.00 0.00 2.83
529 530 2.427506 GTGCTCCCTTCGAATTCTGTT 58.572 47.619 0.00 0.00 0.00 3.16
530 531 1.339151 GGTGCTCCCTTCGAATTCTGT 60.339 52.381 0.00 0.00 0.00 3.41
531 532 1.373570 GGTGCTCCCTTCGAATTCTG 58.626 55.000 0.00 0.00 0.00 3.02
532 533 3.863407 GGTGCTCCCTTCGAATTCT 57.137 52.632 0.00 0.00 0.00 2.40
543 544 3.695606 TCGTGCTCTGGGTGCTCC 61.696 66.667 0.00 0.00 0.00 4.70
544 545 2.433318 GTCGTGCTCTGGGTGCTC 60.433 66.667 0.00 0.00 0.00 4.26
545 546 2.919856 AGTCGTGCTCTGGGTGCT 60.920 61.111 0.00 0.00 0.00 4.40
546 547 2.433318 GAGTCGTGCTCTGGGTGC 60.433 66.667 3.24 0.00 40.98 5.01
547 548 0.738762 CATGAGTCGTGCTCTGGGTG 60.739 60.000 0.00 2.83 44.41 4.61
548 549 0.900182 TCATGAGTCGTGCTCTGGGT 60.900 55.000 7.52 0.00 44.41 4.51
549 550 0.463204 ATCATGAGTCGTGCTCTGGG 59.537 55.000 7.52 2.29 44.41 4.45
550 551 1.135721 TCATCATGAGTCGTGCTCTGG 59.864 52.381 7.52 0.00 44.41 3.86
551 552 2.573941 TCATCATGAGTCGTGCTCTG 57.426 50.000 7.52 5.46 44.41 3.35
552 553 3.455327 CATTCATCATGAGTCGTGCTCT 58.545 45.455 7.52 0.00 44.41 4.09
553 554 2.543012 CCATTCATCATGAGTCGTGCTC 59.457 50.000 7.52 3.46 44.36 4.26
554 555 2.558378 CCATTCATCATGAGTCGTGCT 58.442 47.619 7.52 0.00 34.31 4.40
555 556 1.003116 GCCATTCATCATGAGTCGTGC 60.003 52.381 7.52 0.00 34.31 5.34
556 557 2.287103 CAGCCATTCATCATGAGTCGTG 59.713 50.000 5.96 5.96 34.31 4.35
557 558 2.169144 TCAGCCATTCATCATGAGTCGT 59.831 45.455 0.09 0.00 34.31 4.34
558 559 2.801111 CTCAGCCATTCATCATGAGTCG 59.199 50.000 0.09 0.00 34.31 4.18
559 560 4.059511 CTCTCAGCCATTCATCATGAGTC 58.940 47.826 0.09 0.00 38.76 3.36
560 561 3.744846 GCTCTCAGCCATTCATCATGAGT 60.745 47.826 0.09 0.00 38.76 3.41
561 562 2.809119 GCTCTCAGCCATTCATCATGAG 59.191 50.000 0.09 0.00 38.97 2.90
562 563 2.805657 CGCTCTCAGCCATTCATCATGA 60.806 50.000 0.00 0.00 38.18 3.07
563 564 1.531578 CGCTCTCAGCCATTCATCATG 59.468 52.381 0.00 0.00 38.18 3.07
564 565 1.880271 CGCTCTCAGCCATTCATCAT 58.120 50.000 0.00 0.00 38.18 2.45
565 566 0.812811 GCGCTCTCAGCCATTCATCA 60.813 55.000 0.00 0.00 38.18 3.07
566 567 1.829349 CGCGCTCTCAGCCATTCATC 61.829 60.000 5.56 0.00 38.18 2.92
567 568 1.886313 CGCGCTCTCAGCCATTCAT 60.886 57.895 5.56 0.00 38.18 2.57
568 569 2.510012 CGCGCTCTCAGCCATTCA 60.510 61.111 5.56 0.00 38.18 2.57
569 570 2.960957 TAGCGCGCTCTCAGCCATTC 62.961 60.000 40.23 0.00 38.18 2.67
570 571 2.578163 TTAGCGCGCTCTCAGCCATT 62.578 55.000 40.23 12.72 38.18 3.16
571 572 2.967929 CTTAGCGCGCTCTCAGCCAT 62.968 60.000 40.23 13.60 38.18 4.40
572 573 3.706563 CTTAGCGCGCTCTCAGCCA 62.707 63.158 40.23 16.36 38.18 4.75
573 574 2.959071 CTTAGCGCGCTCTCAGCC 60.959 66.667 40.23 1.45 38.18 4.85
574 575 2.202676 ACTTAGCGCGCTCTCAGC 60.203 61.111 40.23 2.23 38.02 4.26
575 576 1.875813 CCACTTAGCGCGCTCTCAG 60.876 63.158 40.23 31.08 0.00 3.35
576 577 2.181777 CCACTTAGCGCGCTCTCA 59.818 61.111 40.23 19.10 0.00 3.27
577 578 3.258290 GCCACTTAGCGCGCTCTC 61.258 66.667 40.23 16.86 0.00 3.20
585 586 1.084370 AACGATCAGCGCCACTTAGC 61.084 55.000 2.29 0.00 46.04 3.09
586 587 0.647410 CAACGATCAGCGCCACTTAG 59.353 55.000 2.29 0.00 46.04 2.18
587 588 1.358725 GCAACGATCAGCGCCACTTA 61.359 55.000 2.29 0.00 46.04 2.24
588 589 2.680913 GCAACGATCAGCGCCACTT 61.681 57.895 2.29 0.00 46.04 3.16
589 590 3.121030 GCAACGATCAGCGCCACT 61.121 61.111 2.29 0.00 46.04 4.00
595 596 2.510238 AGCCTCGCAACGATCAGC 60.510 61.111 0.00 0.00 34.61 4.26
596 597 1.880340 GGAGCCTCGCAACGATCAG 60.880 63.158 0.00 0.00 34.61 2.90
597 598 2.184322 GGAGCCTCGCAACGATCA 59.816 61.111 0.00 0.00 34.61 2.92
598 599 2.586357 GGGAGCCTCGCAACGATC 60.586 66.667 3.57 0.00 34.61 3.69
599 600 4.514577 CGGGAGCCTCGCAACGAT 62.515 66.667 9.61 0.00 34.61 3.73
601 602 4.735132 TTCGGGAGCCTCGCAACG 62.735 66.667 9.61 0.36 0.00 4.10
602 603 2.781595 TTCTTCGGGAGCCTCGCAAC 62.782 60.000 9.61 0.00 0.00 4.17
603 604 2.507110 CTTCTTCGGGAGCCTCGCAA 62.507 60.000 9.61 2.18 0.00 4.85
604 605 2.994995 TTCTTCGGGAGCCTCGCA 60.995 61.111 9.61 0.00 0.00 5.10
605 606 2.202810 CTTCTTCGGGAGCCTCGC 60.203 66.667 0.00 0.00 0.00 5.03
606 607 2.202810 GCTTCTTCGGGAGCCTCG 60.203 66.667 0.00 0.00 0.00 4.63
607 608 2.202810 CGCTTCTTCGGGAGCCTC 60.203 66.667 0.00 0.00 0.00 4.70
608 609 4.459089 GCGCTTCTTCGGGAGCCT 62.459 66.667 0.00 0.00 0.00 4.58
609 610 4.459089 AGCGCTTCTTCGGGAGCC 62.459 66.667 2.64 0.00 0.00 4.70
610 611 2.888051 GAGCGCTTCTTCGGGAGC 60.888 66.667 13.26 0.00 0.00 4.70
611 612 2.580867 CGAGCGCTTCTTCGGGAG 60.581 66.667 13.26 0.00 0.00 4.30
612 613 1.588824 TAACGAGCGCTTCTTCGGGA 61.589 55.000 13.26 0.00 0.00 5.14
613 614 0.734942 TTAACGAGCGCTTCTTCGGG 60.735 55.000 13.26 0.00 0.00 5.14
614 615 1.278238 ATTAACGAGCGCTTCTTCGG 58.722 50.000 13.26 0.00 0.00 4.30
615 616 3.546670 ACTAATTAACGAGCGCTTCTTCG 59.453 43.478 13.26 13.91 0.00 3.79
616 617 5.248834 CAACTAATTAACGAGCGCTTCTTC 58.751 41.667 13.26 0.00 0.00 2.87
617 618 4.435651 GCAACTAATTAACGAGCGCTTCTT 60.436 41.667 13.26 8.66 0.00 2.52
618 619 3.062234 GCAACTAATTAACGAGCGCTTCT 59.938 43.478 13.26 1.05 0.00 2.85
619 620 3.062234 AGCAACTAATTAACGAGCGCTTC 59.938 43.478 13.26 3.81 0.00 3.86
620 621 3.000727 AGCAACTAATTAACGAGCGCTT 58.999 40.909 13.26 0.00 0.00 4.68
621 622 2.603560 GAGCAACTAATTAACGAGCGCT 59.396 45.455 11.27 11.27 0.00 5.92
622 623 2.603560 AGAGCAACTAATTAACGAGCGC 59.396 45.455 0.00 0.00 0.00 5.92
623 624 3.243177 GGAGAGCAACTAATTAACGAGCG 59.757 47.826 0.00 0.00 0.00 5.03
624 625 4.434520 AGGAGAGCAACTAATTAACGAGC 58.565 43.478 0.00 0.00 0.00 5.03
625 626 5.651530 TGAGGAGAGCAACTAATTAACGAG 58.348 41.667 0.00 0.00 0.00 4.18
626 627 5.654603 TGAGGAGAGCAACTAATTAACGA 57.345 39.130 0.00 0.00 0.00 3.85
627 628 6.721571 TTTGAGGAGAGCAACTAATTAACG 57.278 37.500 0.00 0.00 0.00 3.18
628 629 7.040686 TGGTTTTGAGGAGAGCAACTAATTAAC 60.041 37.037 0.00 0.00 0.00 2.01
629 630 7.001674 TGGTTTTGAGGAGAGCAACTAATTAA 58.998 34.615 0.00 0.00 0.00 1.40
630 631 6.539173 TGGTTTTGAGGAGAGCAACTAATTA 58.461 36.000 0.00 0.00 0.00 1.40
631 632 5.385198 TGGTTTTGAGGAGAGCAACTAATT 58.615 37.500 0.00 0.00 0.00 1.40
632 633 4.985538 TGGTTTTGAGGAGAGCAACTAAT 58.014 39.130 0.00 0.00 0.00 1.73
633 634 4.431416 TGGTTTTGAGGAGAGCAACTAA 57.569 40.909 0.00 0.00 0.00 2.24
634 635 4.431416 TTGGTTTTGAGGAGAGCAACTA 57.569 40.909 0.00 0.00 0.00 2.24
635 636 3.297134 TTGGTTTTGAGGAGAGCAACT 57.703 42.857 0.00 0.00 0.00 3.16
636 637 3.796844 GCTTTGGTTTTGAGGAGAGCAAC 60.797 47.826 0.00 0.00 31.35 4.17
637 638 2.362077 GCTTTGGTTTTGAGGAGAGCAA 59.638 45.455 0.00 0.00 0.00 3.91
638 639 1.956477 GCTTTGGTTTTGAGGAGAGCA 59.044 47.619 0.00 0.00 0.00 4.26
639 640 1.270826 GGCTTTGGTTTTGAGGAGAGC 59.729 52.381 0.00 0.00 0.00 4.09
640 641 1.537202 CGGCTTTGGTTTTGAGGAGAG 59.463 52.381 0.00 0.00 0.00 3.20
641 642 1.133915 ACGGCTTTGGTTTTGAGGAGA 60.134 47.619 0.00 0.00 0.00 3.71
642 643 1.318576 ACGGCTTTGGTTTTGAGGAG 58.681 50.000 0.00 0.00 0.00 3.69
643 644 1.770294 AACGGCTTTGGTTTTGAGGA 58.230 45.000 0.00 0.00 0.00 3.71
644 645 2.200899 CAAACGGCTTTGGTTTTGAGG 58.799 47.619 0.00 0.00 35.53 3.86
645 646 2.602660 CACAAACGGCTTTGGTTTTGAG 59.397 45.455 12.03 0.00 41.12 3.02
646 647 2.611518 CACAAACGGCTTTGGTTTTGA 58.388 42.857 12.03 0.00 41.12 2.69
647 648 1.061857 GCACAAACGGCTTTGGTTTTG 59.938 47.619 12.03 0.00 41.12 2.44
648 649 1.066502 AGCACAAACGGCTTTGGTTTT 60.067 42.857 12.03 0.00 41.12 2.43
649 650 0.534873 AGCACAAACGGCTTTGGTTT 59.465 45.000 12.03 0.00 41.12 3.27
650 651 0.102300 GAGCACAAACGGCTTTGGTT 59.898 50.000 12.03 0.00 42.78 3.67
651 652 1.034838 TGAGCACAAACGGCTTTGGT 61.035 50.000 12.03 0.00 42.78 3.67
652 653 0.318107 CTGAGCACAAACGGCTTTGG 60.318 55.000 12.03 0.00 42.78 3.28
653 654 0.381801 ACTGAGCACAAACGGCTTTG 59.618 50.000 7.56 7.56 42.78 2.77
654 655 0.663153 GACTGAGCACAAACGGCTTT 59.337 50.000 0.00 0.00 42.78 3.51
655 656 1.166531 GGACTGAGCACAAACGGCTT 61.167 55.000 0.00 0.00 42.78 4.35
656 657 1.598130 GGACTGAGCACAAACGGCT 60.598 57.895 0.00 0.00 46.07 5.52
657 658 1.237285 ATGGACTGAGCACAAACGGC 61.237 55.000 0.00 0.00 0.00 5.68
658 659 0.518636 CATGGACTGAGCACAAACGG 59.481 55.000 0.00 0.00 0.00 4.44
659 660 1.229428 ACATGGACTGAGCACAAACG 58.771 50.000 0.00 0.00 0.00 3.60
660 661 2.287788 CCAACATGGACTGAGCACAAAC 60.288 50.000 0.00 0.00 40.96 2.93
661 662 1.955778 CCAACATGGACTGAGCACAAA 59.044 47.619 0.00 0.00 40.96 2.83
662 663 1.133823 ACCAACATGGACTGAGCACAA 60.134 47.619 2.85 0.00 40.96 3.33
663 664 0.473755 ACCAACATGGACTGAGCACA 59.526 50.000 2.85 0.00 40.96 4.57
664 665 0.877071 CACCAACATGGACTGAGCAC 59.123 55.000 2.85 0.00 40.96 4.40
665 666 0.250858 CCACCAACATGGACTGAGCA 60.251 55.000 2.85 0.00 43.02 4.26
666 667 0.962356 CCCACCAACATGGACTGAGC 60.962 60.000 2.85 0.00 43.02 4.26
667 668 0.962356 GCCCACCAACATGGACTGAG 60.962 60.000 2.85 0.00 43.02 3.35
668 669 1.074775 GCCCACCAACATGGACTGA 59.925 57.895 2.85 0.00 43.02 3.41
669 670 0.962356 GAGCCCACCAACATGGACTG 60.962 60.000 2.85 0.00 43.02 3.51
670 671 1.380302 GAGCCCACCAACATGGACT 59.620 57.895 2.85 0.00 43.02 3.85
671 672 2.040544 CGAGCCCACCAACATGGAC 61.041 63.158 2.85 0.00 43.02 4.02
672 673 2.350895 CGAGCCCACCAACATGGA 59.649 61.111 2.85 0.00 43.02 3.41
673 674 2.034066 ACGAGCCCACCAACATGG 59.966 61.111 0.00 0.00 45.02 3.66
674 675 2.334946 CCACGAGCCCACCAACATG 61.335 63.158 0.00 0.00 0.00 3.21
675 676 2.034066 CCACGAGCCCACCAACAT 59.966 61.111 0.00 0.00 0.00 2.71
676 677 4.947147 GCCACGAGCCCACCAACA 62.947 66.667 0.00 0.00 34.35 3.33
685 686 3.851128 GGGTAGGAGGCCACGAGC 61.851 72.222 5.01 3.11 42.60 5.03
686 687 3.155167 GGGGTAGGAGGCCACGAG 61.155 72.222 5.01 0.00 0.00 4.18
687 688 4.791069 GGGGGTAGGAGGCCACGA 62.791 72.222 5.01 0.00 0.00 4.35
701 702 4.856801 CTCGTTGATGGGCGGGGG 62.857 72.222 0.00 0.00 0.00 5.40
702 703 2.996168 GATCTCGTTGATGGGCGGGG 62.996 65.000 0.00 0.00 35.14 5.73
703 704 1.595382 GATCTCGTTGATGGGCGGG 60.595 63.158 0.00 0.00 35.14 6.13
704 705 1.951130 CGATCTCGTTGATGGGCGG 60.951 63.158 0.00 0.00 35.14 6.13
705 706 0.527600 TTCGATCTCGTTGATGGGCG 60.528 55.000 0.00 0.00 40.80 6.13
706 707 0.931005 GTTCGATCTCGTTGATGGGC 59.069 55.000 0.00 0.00 40.80 5.36
707 708 1.571919 GGTTCGATCTCGTTGATGGG 58.428 55.000 0.00 0.00 40.80 4.00
708 709 1.134818 TGGGTTCGATCTCGTTGATGG 60.135 52.381 0.00 0.00 40.80 3.51
709 710 2.293677 TGGGTTCGATCTCGTTGATG 57.706 50.000 0.00 0.00 40.80 3.07
710 711 2.695666 AGATGGGTTCGATCTCGTTGAT 59.304 45.455 0.00 0.00 40.80 2.57
711 712 2.099263 GAGATGGGTTCGATCTCGTTGA 59.901 50.000 4.62 0.00 37.25 3.18
712 713 2.159240 TGAGATGGGTTCGATCTCGTTG 60.159 50.000 12.76 0.00 46.10 4.10
713 714 2.099921 CTGAGATGGGTTCGATCTCGTT 59.900 50.000 12.76 0.00 46.10 3.85
714 715 1.678627 CTGAGATGGGTTCGATCTCGT 59.321 52.381 12.76 0.00 46.10 4.18
715 716 1.950216 TCTGAGATGGGTTCGATCTCG 59.050 52.381 12.76 9.07 46.10 4.04
716 717 3.218453 TCTCTGAGATGGGTTCGATCTC 58.782 50.000 2.58 11.34 44.24 2.75
717 718 3.117701 TCTCTCTGAGATGGGTTCGATCT 60.118 47.826 8.00 0.00 33.35 2.75
718 719 3.218453 TCTCTCTGAGATGGGTTCGATC 58.782 50.000 8.00 0.00 33.35 3.69
719 720 3.304911 TCTCTCTGAGATGGGTTCGAT 57.695 47.619 8.00 0.00 33.35 3.59
720 721 2.808906 TCTCTCTGAGATGGGTTCGA 57.191 50.000 8.00 0.00 33.35 3.71
721 722 3.382865 TGATTCTCTCTGAGATGGGTTCG 59.617 47.826 8.00 0.00 38.56 3.95
722 723 4.442753 GGTGATTCTCTCTGAGATGGGTTC 60.443 50.000 8.00 2.72 38.56 3.62
723 724 3.454082 GGTGATTCTCTCTGAGATGGGTT 59.546 47.826 8.00 0.00 38.56 4.11
724 725 3.037549 GGTGATTCTCTCTGAGATGGGT 58.962 50.000 8.00 0.00 38.56 4.51
725 726 3.307506 AGGTGATTCTCTCTGAGATGGG 58.692 50.000 8.00 0.00 38.56 4.00
726 727 3.959449 TGAGGTGATTCTCTCTGAGATGG 59.041 47.826 8.00 0.00 38.56 3.51
727 728 5.595257 TTGAGGTGATTCTCTCTGAGATG 57.405 43.478 8.00 3.08 38.56 2.90
728 729 6.440010 TCTTTTGAGGTGATTCTCTCTGAGAT 59.560 38.462 8.00 0.00 38.56 2.75
729 730 5.777223 TCTTTTGAGGTGATTCTCTCTGAGA 59.223 40.000 7.24 7.24 36.86 3.27
730 731 6.035368 TCTTTTGAGGTGATTCTCTCTGAG 57.965 41.667 0.00 0.00 34.98 3.35
731 732 6.425210 TTCTTTTGAGGTGATTCTCTCTGA 57.575 37.500 8.35 0.00 34.98 3.27
732 733 7.502120 TTTTCTTTTGAGGTGATTCTCTCTG 57.498 36.000 8.35 0.00 34.98 3.35
775 776 1.726853 CCTGGCTCGATCTCGTTTTT 58.273 50.000 0.00 0.00 40.80 1.94
776 777 0.741221 GCCTGGCTCGATCTCGTTTT 60.741 55.000 12.43 0.00 40.80 2.43
777 778 1.153549 GCCTGGCTCGATCTCGTTT 60.154 57.895 12.43 0.00 40.80 3.60
778 779 2.496817 GCCTGGCTCGATCTCGTT 59.503 61.111 12.43 0.00 40.80 3.85
779 780 3.532155 GGCCTGGCTCGATCTCGT 61.532 66.667 19.68 0.00 40.80 4.18
780 781 4.292178 GGGCCTGGCTCGATCTCG 62.292 72.222 19.68 0.00 41.45 4.04
781 782 3.157252 TGGGCCTGGCTCGATCTC 61.157 66.667 19.68 0.00 0.00 2.75
782 783 3.160047 CTGGGCCTGGCTCGATCT 61.160 66.667 19.68 0.00 0.00 2.75
783 784 4.247380 CCTGGGCCTGGCTCGATC 62.247 72.222 19.68 0.39 0.00 3.69
791 792 4.133373 CACATCCCCCTGGGCCTG 62.133 72.222 7.39 3.68 43.94 4.85
792 793 4.701437 ACACATCCCCCTGGGCCT 62.701 66.667 7.39 0.00 43.94 5.19
793 794 4.447342 CACACATCCCCCTGGGCC 62.447 72.222 7.39 0.00 43.94 5.80
794 795 3.661648 ACACACATCCCCCTGGGC 61.662 66.667 7.39 0.00 43.94 5.36
795 796 1.574526 ATCACACACATCCCCCTGGG 61.575 60.000 5.50 5.50 46.11 4.45
796 797 1.141657 CTATCACACACATCCCCCTGG 59.858 57.143 0.00 0.00 0.00 4.45
797 798 1.141657 CCTATCACACACATCCCCCTG 59.858 57.143 0.00 0.00 0.00 4.45
798 799 1.511613 CCTATCACACACATCCCCCT 58.488 55.000 0.00 0.00 0.00 4.79
799 800 0.179018 GCCTATCACACACATCCCCC 60.179 60.000 0.00 0.00 0.00 5.40
800 801 0.546122 TGCCTATCACACACATCCCC 59.454 55.000 0.00 0.00 0.00 4.81
801 802 1.668419 GTGCCTATCACACACATCCC 58.332 55.000 0.00 0.00 44.98 3.85
802 803 1.290203 CGTGCCTATCACACACATCC 58.710 55.000 0.00 0.00 45.92 3.51
803 804 1.660607 CACGTGCCTATCACACACATC 59.339 52.381 0.82 0.00 45.92 3.06
804 805 1.725641 CACGTGCCTATCACACACAT 58.274 50.000 0.82 0.00 45.92 3.21
805 806 0.948623 GCACGTGCCTATCACACACA 60.949 55.000 30.12 0.00 45.92 3.72
806 807 1.787847 GCACGTGCCTATCACACAC 59.212 57.895 30.12 0.00 45.92 3.82
807 808 4.277239 GCACGTGCCTATCACACA 57.723 55.556 30.12 0.00 45.92 3.72
833 834 2.594592 GCAGTGCGGGGTTTCAGT 60.595 61.111 0.00 0.00 0.00 3.41
834 835 3.365265 GGCAGTGCGGGGTTTCAG 61.365 66.667 9.45 0.00 0.00 3.02
957 958 2.899838 GTGGAGTGCAACACGGCA 60.900 61.111 0.00 0.00 41.43 5.69
964 965 1.367471 CGACTGGAGTGGAGTGCAA 59.633 57.895 0.00 0.00 0.00 4.08
965 966 3.051210 CGACTGGAGTGGAGTGCA 58.949 61.111 0.00 0.00 0.00 4.57
989 1006 2.280079 CTTCCATGGCCTTCCCCC 59.720 66.667 6.96 0.00 0.00 5.40
1019 1036 4.461781 GGGTAGGCGAAATCTAGCAGTATA 59.538 45.833 0.00 0.00 37.06 1.47
1321 1338 2.996168 ATAAGCGGCGATCTGGTGGC 62.996 60.000 12.98 0.00 0.00 5.01
1344 1361 2.743183 GCCTGATACAGCACAAGGGTAG 60.743 54.545 0.00 0.00 0.00 3.18
1982 2001 5.486735 TTTCATTTCAATGTGGGAATGCT 57.513 34.783 0.00 0.00 37.65 3.79
2006 2025 1.080025 GTCCTGACACCACGCTACC 60.080 63.158 0.00 0.00 0.00 3.18
2013 2032 3.907474 TCTTAGATTTGGTCCTGACACCA 59.093 43.478 0.00 0.00 45.25 4.17
2085 2109 6.364706 GTCATAGAAGCTAAGACCATCATTCG 59.635 42.308 0.00 0.00 0.00 3.34
2258 2283 1.790387 GCATGTCCTGCGTCTGTTC 59.210 57.895 0.00 0.00 41.97 3.18
2314 2341 4.759782 TCTAGAAAGGGAGAAAGAATGCG 58.240 43.478 0.00 0.00 0.00 4.73
2381 2414 4.204012 TGGAGAATGAAACGAAACCAGTT 58.796 39.130 0.00 0.00 0.00 3.16
3530 3586 0.104855 TCATGACCCGCTAGTGATGC 59.895 55.000 4.44 0.00 32.14 3.91
3544 3600 7.671302 AGCTAGAAACTAAGTCAAAGTCATGA 58.329 34.615 0.00 0.00 0.00 3.07
4266 4325 4.106029 TCTAAAGACTACACGGTCATGC 57.894 45.455 0.00 0.00 38.57 4.06
4315 4377 4.406069 CACGTGATGACAAATTGATGACC 58.594 43.478 10.90 0.00 0.00 4.02
4437 4501 5.045215 CGCAGCCAATAATGATTTGACAAT 58.955 37.500 0.00 0.00 0.00 2.71
4624 4688 8.417106 CAGTTCCATGACTATGACTATGTAAGT 58.583 37.037 0.00 0.00 42.80 2.24
4878 4943 4.408694 GAGAGTCTTCTCGAACAAGTAGC 58.591 47.826 0.00 0.00 44.65 3.58
4935 5000 0.321122 CAGCAGTTGACACCTCCTCC 60.321 60.000 0.00 0.00 0.00 4.30
4950 5015 1.253100 TCTGTATGGACGACACAGCA 58.747 50.000 0.00 0.00 39.60 4.41
5021 5086 6.371278 ACTCCTAAATGAATGAGATGCCAAT 58.629 36.000 0.00 0.00 0.00 3.16
5026 5091 6.988580 TGTGCTACTCCTAAATGAATGAGATG 59.011 38.462 0.00 0.00 0.00 2.90
5129 5194 1.667236 TTCCACACTCTTGCACTGTG 58.333 50.000 2.76 2.76 35.95 3.66
5133 5198 2.288395 CCCATTTTCCACACTCTTGCAC 60.288 50.000 0.00 0.00 0.00 4.57
5141 5206 0.608130 GGGCTTCCCATTTTCCACAC 59.392 55.000 0.00 0.00 44.65 3.82
5142 5207 3.065462 GGGCTTCCCATTTTCCACA 57.935 52.632 0.00 0.00 44.65 4.17
5299 5367 4.415596 TGCCACAAATTACCTCCATTTCT 58.584 39.130 0.00 0.00 0.00 2.52
5433 5501 5.180117 GCACGCTATGAAATATTCCATGACT 59.820 40.000 0.00 0.00 0.00 3.41
5523 5592 1.689813 TCTTTGACGCCACTGACCTAA 59.310 47.619 0.00 0.00 0.00 2.69
5536 5605 3.124297 CGCCTCAAGTCTTGATCTTTGAC 59.876 47.826 15.60 0.00 39.30 3.18
5541 5610 0.107945 GCCGCCTCAAGTCTTGATCT 60.108 55.000 15.60 0.00 39.30 2.75
5622 5691 3.327757 AGTGAATACTTGGAAGCACCTGA 59.672 43.478 0.00 0.00 39.86 3.86
5623 5692 3.679389 AGTGAATACTTGGAAGCACCTG 58.321 45.455 0.00 0.00 39.86 4.00
5624 5693 3.584848 AGAGTGAATACTTGGAAGCACCT 59.415 43.478 0.00 0.00 37.25 4.00
5625 5694 3.935828 GAGAGTGAATACTTGGAAGCACC 59.064 47.826 0.00 0.00 37.25 5.01
5626 5695 4.826556 AGAGAGTGAATACTTGGAAGCAC 58.173 43.478 0.00 0.00 37.25 4.40
5627 5696 5.489792 AAGAGAGTGAATACTTGGAAGCA 57.510 39.130 0.00 0.00 37.25 3.91
5628 5697 5.934625 TGAAAGAGAGTGAATACTTGGAAGC 59.065 40.000 0.00 0.00 37.25 3.86
5629 5698 7.969536 TTGAAAGAGAGTGAATACTTGGAAG 57.030 36.000 0.00 0.00 37.25 3.46
5630 5699 7.773224 TGTTTGAAAGAGAGTGAATACTTGGAA 59.227 33.333 0.00 0.00 37.25 3.53
5631 5700 7.279615 TGTTTGAAAGAGAGTGAATACTTGGA 58.720 34.615 0.00 0.00 37.25 3.53
5632 5701 7.496529 TGTTTGAAAGAGAGTGAATACTTGG 57.503 36.000 0.00 0.00 37.25 3.61
5633 5702 9.956720 AATTGTTTGAAAGAGAGTGAATACTTG 57.043 29.630 0.00 0.00 37.25 3.16
5635 5704 9.342308 TGAATTGTTTGAAAGAGAGTGAATACT 57.658 29.630 0.00 0.00 40.66 2.12
5636 5705 9.604626 CTGAATTGTTTGAAAGAGAGTGAATAC 57.395 33.333 0.00 0.00 0.00 1.89
5637 5706 8.786898 CCTGAATTGTTTGAAAGAGAGTGAATA 58.213 33.333 0.00 0.00 0.00 1.75
5638 5707 7.503566 TCCTGAATTGTTTGAAAGAGAGTGAAT 59.496 33.333 0.00 0.00 0.00 2.57
5639 5708 6.828273 TCCTGAATTGTTTGAAAGAGAGTGAA 59.172 34.615 0.00 0.00 0.00 3.18
5651 5720 4.314740 TTTTCCCGTCCTGAATTGTTTG 57.685 40.909 0.00 0.00 0.00 2.93
5656 5725 5.133221 CCTGATATTTTCCCGTCCTGAATT 58.867 41.667 0.00 0.00 0.00 2.17
5665 5734 3.485463 TGGTAGCCTGATATTTTCCCG 57.515 47.619 0.00 0.00 0.00 5.14
5680 5749 0.103208 GAGCTCCCGTGTCATGGTAG 59.897 60.000 10.28 4.82 0.00 3.18
5681 5750 0.324368 AGAGCTCCCGTGTCATGGTA 60.324 55.000 10.93 0.00 0.00 3.25
5682 5751 1.194781 AAGAGCTCCCGTGTCATGGT 61.195 55.000 10.93 0.00 0.00 3.55
5722 5808 2.975410 TCTCAATTTGTCGCAAGCTG 57.025 45.000 0.00 0.00 37.18 4.24
5732 5818 6.703165 CCTCTTCAAAGGGTTTTCTCAATTTG 59.297 38.462 0.00 0.00 32.35 2.32
5770 5856 2.592993 CGGAACCTCTGGGCCTGAA 61.593 63.158 14.44 0.00 35.63 3.02
5772 5858 2.370445 ATCGGAACCTCTGGGCCTG 61.370 63.158 4.53 4.06 35.63 4.85
5773 5859 2.041265 ATCGGAACCTCTGGGCCT 59.959 61.111 4.53 0.00 35.63 5.19
5774 5860 2.190578 CATCGGAACCTCTGGGCC 59.809 66.667 0.00 0.00 35.63 5.80
5775 5861 2.514824 GCATCGGAACCTCTGGGC 60.515 66.667 0.00 0.00 35.63 5.36
5776 5862 1.144936 GAGCATCGGAACCTCTGGG 59.855 63.158 0.00 0.00 38.88 4.45
5790 5876 0.525455 CGTGGATCGAACGATGAGCA 60.525 55.000 14.33 0.00 43.68 4.26
5802 5888 1.887707 GGCCGTTGGATCGTGGATC 60.888 63.158 0.00 0.00 38.25 3.36
5805 5891 3.910914 TTGGGCCGTTGGATCGTGG 62.911 63.158 0.00 0.00 0.00 4.94
5808 5894 1.376683 TTCTTGGGCCGTTGGATCG 60.377 57.895 0.00 0.00 0.00 3.69
5812 5898 1.971695 GGAGTTCTTGGGCCGTTGG 60.972 63.158 0.00 0.00 0.00 3.77
5837 5924 0.918799 TACCACTCCCATGCACCCAT 60.919 55.000 0.00 0.00 0.00 4.00
5854 5941 9.771534 AAGTAGATTCATAGAATTTGCTCCTAC 57.228 33.333 2.39 0.00 0.00 3.18
5871 5958 7.931275 ACCAAGTTTTCAACTGAAGTAGATTC 58.069 34.615 0.00 0.00 41.91 2.52
5873 5960 7.012421 GTGACCAAGTTTTCAACTGAAGTAGAT 59.988 37.037 0.00 0.00 41.91 1.98
5875 5962 6.487103 GTGACCAAGTTTTCAACTGAAGTAG 58.513 40.000 0.00 0.00 41.91 2.57
5878 5965 4.342772 CGTGACCAAGTTTTCAACTGAAG 58.657 43.478 0.00 0.00 41.91 3.02
5879 5966 3.127895 CCGTGACCAAGTTTTCAACTGAA 59.872 43.478 0.00 0.00 41.91 3.02
5880 5967 2.680841 CCGTGACCAAGTTTTCAACTGA 59.319 45.455 0.00 0.00 41.91 3.41
5881 5968 2.422127 ACCGTGACCAAGTTTTCAACTG 59.578 45.455 0.00 0.00 41.91 3.16
5884 5971 2.940410 GAGACCGTGACCAAGTTTTCAA 59.060 45.455 0.00 0.00 0.00 2.69
5885 5972 2.557317 GAGACCGTGACCAAGTTTTCA 58.443 47.619 0.00 0.00 0.00 2.69
5886 5973 1.871676 GGAGACCGTGACCAAGTTTTC 59.128 52.381 0.00 0.00 0.00 2.29
5888 5975 0.108019 GGGAGACCGTGACCAAGTTT 59.892 55.000 0.00 0.00 43.64 2.66
5889 5976 1.752833 GGGAGACCGTGACCAAGTT 59.247 57.895 0.00 0.00 43.64 2.66
5890 5977 3.468063 GGGAGACCGTGACCAAGT 58.532 61.111 0.00 0.00 43.64 3.16
5907 6013 5.997385 AGTGCGGTTGTGATTTTTACTAAG 58.003 37.500 0.00 0.00 0.00 2.18
5909 6015 5.302360 AGAGTGCGGTTGTGATTTTTACTA 58.698 37.500 0.00 0.00 0.00 1.82
5911 6017 4.464112 GAGAGTGCGGTTGTGATTTTTAC 58.536 43.478 0.00 0.00 0.00 2.01
5953 6059 6.496338 AATTACTCCTTTTTCCGCTACAAG 57.504 37.500 0.00 0.00 0.00 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.