Multiple sequence alignment - TraesCS4D01G220000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G220000 chr4D 100.000 3554 0 0 1696 5249 375124120 375127673 0.000000e+00 6564.0
1 TraesCS4D01G220000 chr4D 100.000 1511 0 0 1 1511 375122425 375123935 0.000000e+00 2791.0
2 TraesCS4D01G220000 chr4A 92.494 1572 93 13 1696 3255 89444058 89442500 0.000000e+00 2226.0
3 TraesCS4D01G220000 chr4A 93.267 1515 80 10 4 1511 89445577 89444078 0.000000e+00 2213.0
4 TraesCS4D01G220000 chr4A 92.102 899 31 15 3282 4157 89442503 89441622 0.000000e+00 1230.0
5 TraesCS4D01G220000 chr4A 86.402 478 44 11 4148 4621 89441589 89441129 2.180000e-138 503.0
6 TraesCS4D01G220000 chr4B 92.750 1531 83 12 1 1511 462215066 462216588 0.000000e+00 2187.0
7 TraesCS4D01G220000 chr4B 89.748 1073 49 24 2578 3632 462217446 462218475 0.000000e+00 1315.0
8 TraesCS4D01G220000 chr4B 93.750 848 41 5 1696 2540 462216608 462217446 0.000000e+00 1262.0
9 TraesCS4D01G220000 chr4B 88.404 664 48 15 3754 4415 462218963 462219599 0.000000e+00 773.0
10 TraesCS4D01G220000 chr4B 94.163 257 13 1 4379 4635 462219601 462219855 1.770000e-104 390.0
11 TraesCS4D01G220000 chr4B 81.941 371 39 17 4899 5248 649124783 649125146 6.650000e-74 289.0
12 TraesCS4D01G220000 chr4B 95.349 172 5 1 4699 4867 462219936 462220107 2.410000e-68 270.0
13 TraesCS4D01G220000 chr2B 87.675 357 31 8 4895 5249 789616513 789616858 2.280000e-108 403.0
14 TraesCS4D01G220000 chr3A 84.492 374 31 7 4895 5249 441582778 441582413 1.400000e-90 344.0
15 TraesCS4D01G220000 chr2A 83.378 373 33 22 4899 5249 103096113 103096478 8.480000e-83 318.0
16 TraesCS4D01G220000 chr1A 83.425 362 25 8 4895 5249 493917993 493917660 2.380000e-78 303.0
17 TraesCS4D01G220000 chr1A 82.133 375 35 18 4899 5249 14794935 14794569 5.140000e-75 292.0
18 TraesCS4D01G220000 chr5B 82.620 374 34 18 4899 5249 54142214 54141849 8.540000e-78 302.0
19 TraesCS4D01G220000 chr7D 85.263 285 26 7 4898 5174 361056924 361057200 4.000000e-71 279.0
20 TraesCS4D01G220000 chr2D 79.128 321 36 19 4895 5214 85733479 85733769 5.360000e-45 193.0
21 TraesCS4D01G220000 chr5D 88.889 72 3 5 5173 5243 402724483 402724550 3.370000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G220000 chr4D 375122425 375127673 5248 False 4677.500000 6564 100.000000 1 5249 2 chr4D.!!$F1 5248
1 TraesCS4D01G220000 chr4A 89441129 89445577 4448 True 1543.000000 2226 91.066250 4 4621 4 chr4A.!!$R1 4617
2 TraesCS4D01G220000 chr4B 462215066 462220107 5041 False 1032.833333 2187 92.360667 1 4867 6 chr4B.!!$F2 4866

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
913 919 0.447406 CATTGATGCCTTTCGTGCGA 59.553 50.000 0.00 0.00 0.00 5.10 F
1115 1137 1.029947 GTTGGAGGGGGTTATGTGCG 61.030 60.000 0.00 0.00 0.00 5.34 F
1281 1303 1.909287 GAGGAGGGAGATACCGGCC 60.909 68.421 0.00 0.00 40.11 6.13 F
2935 2973 1.003580 TCTGGCCTTCAGGATGTGTTC 59.996 52.381 3.32 0.00 43.53 3.18 F
4089 4539 0.843984 TAGGCTGGCCCAGTATTTCC 59.156 55.000 13.35 4.32 36.58 3.13 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2492 2520 1.535833 TCACACCACACCGTTTTTGT 58.464 45.0 0.00 0.0 0.00 2.83 R
2935 2973 0.879090 GCAAACCTAGGGTCAAACCG 59.121 55.0 14.81 0.0 39.83 4.44 R
2943 2981 2.132089 TTGGTCGGGCAAACCTAGGG 62.132 60.0 14.81 0.0 37.69 3.53 R
4179 4674 0.036388 TGCTCATCTTCCCCGTGTTC 60.036 55.0 0.00 0.0 0.00 3.18 R
4944 5521 0.033109 GGGCTCCAATAGGGCACTTT 60.033 55.0 0.00 0.0 33.33 2.66 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
53 54 4.154015 TCGTGTCTTGCATTGTTATCCTTG 59.846 41.667 0.00 0.00 0.00 3.61
152 153 2.362077 GTTGTGCAAAACCTGATCTGGT 59.638 45.455 17.95 17.95 43.11 4.00
220 222 3.126858 CAGTTGATGGGTAACACGATTGG 59.873 47.826 0.00 0.00 39.74 3.16
240 242 7.174946 CGATTGGCTTCAATACACCCTTAATAT 59.825 37.037 0.00 0.00 40.83 1.28
264 266 3.444742 TCTTCCACACATTTGATCATGGC 59.555 43.478 5.98 0.00 0.00 4.40
323 325 5.665812 AGTGGGATGTAGTAATAGCCAAAGA 59.334 40.000 0.00 0.00 0.00 2.52
329 331 7.878127 GGATGTAGTAATAGCCAAAGATAGCAA 59.122 37.037 0.00 0.00 0.00 3.91
364 366 2.093973 CCAGGGCAAGGCTATACGATAG 60.094 54.545 0.00 0.00 46.19 2.08
401 407 8.349983 ACAATCAGGTAGTTTCACATGTAAAAC 58.650 33.333 15.64 15.64 35.97 2.43
407 413 5.678132 AGTTTCACATGTAAAACCGGTAC 57.322 39.130 19.03 2.48 36.29 3.34
526 532 6.215121 CAGAATTTCTATCAGCGTCAGATCT 58.785 40.000 0.00 0.00 0.00 2.75
529 535 3.214696 TCTATCAGCGTCAGATCTCCA 57.785 47.619 0.00 0.00 0.00 3.86
561 567 6.985059 CCCTACTAACAGTACATAAAAGAGCC 59.015 42.308 0.00 0.00 0.00 4.70
610 616 2.434359 CGGGCGTGAAACCTCTCC 60.434 66.667 0.00 0.00 0.00 3.71
689 695 1.291877 GAGTACACCAGCACTTGCCG 61.292 60.000 0.00 0.00 43.38 5.69
726 732 4.302509 TGCTTCCCGTCCGCGAAA 62.303 61.111 8.23 0.00 41.33 3.46
905 911 3.520862 CGCCGCCATTGATGCCTT 61.521 61.111 0.00 0.00 0.00 4.35
906 912 2.894919 GCCGCCATTGATGCCTTT 59.105 55.556 0.00 0.00 0.00 3.11
907 913 1.227060 GCCGCCATTGATGCCTTTC 60.227 57.895 0.00 0.00 0.00 2.62
908 914 1.064621 CCGCCATTGATGCCTTTCG 59.935 57.895 0.00 0.00 0.00 3.46
910 916 0.523968 CGCCATTGATGCCTTTCGTG 60.524 55.000 0.00 0.00 0.00 4.35
911 917 0.803380 GCCATTGATGCCTTTCGTGC 60.803 55.000 0.00 0.00 0.00 5.34
912 918 0.523968 CCATTGATGCCTTTCGTGCG 60.524 55.000 0.00 0.00 0.00 5.34
913 919 0.447406 CATTGATGCCTTTCGTGCGA 59.553 50.000 0.00 0.00 0.00 5.10
914 920 1.064505 CATTGATGCCTTTCGTGCGAT 59.935 47.619 0.00 0.00 0.00 4.58
946 954 2.379907 AGAAGAAATCTGGCTTTGGGGA 59.620 45.455 0.00 0.00 36.88 4.81
1023 1042 6.724893 ATGGTAAATTAGCAAATACACCCC 57.275 37.500 9.04 0.00 39.89 4.95
1026 1045 6.726764 TGGTAAATTAGCAAATACACCCCTTT 59.273 34.615 2.04 0.00 32.06 3.11
1047 1066 7.770897 CCCTTTCTATGAAGCTTATTGTGTACT 59.229 37.037 0.00 0.00 0.00 2.73
1101 1123 2.827322 TCCGAAGAAATCTACGGTTGGA 59.173 45.455 0.00 0.00 44.72 3.53
1115 1137 1.029947 GTTGGAGGGGGTTATGTGCG 61.030 60.000 0.00 0.00 0.00 5.34
1139 1161 6.183359 CGAAACATCAGTTATTTTCCGCTTTG 60.183 38.462 0.00 0.00 36.84 2.77
1159 1181 2.517875 TCCTAGGCGGCGTACTCC 60.518 66.667 9.37 0.00 0.00 3.85
1181 1203 2.824489 TTTGGCGCGGTGTGAACA 60.824 55.556 8.83 0.00 0.00 3.18
1281 1303 1.909287 GAGGAGGGAGATACCGGCC 60.909 68.421 0.00 0.00 40.11 6.13
1478 1500 4.284550 TGTGGCTGGGCTCCAACC 62.285 66.667 6.69 6.69 39.99 3.77
1741 1764 8.842358 TTAGGGTTTATCTGTGTAGAAGTTTG 57.158 34.615 0.00 0.00 36.32 2.93
1755 1778 9.582223 GTGTAGAAGTTTGTCTTTATTTCGAAG 57.418 33.333 0.00 0.00 36.40 3.79
1762 1785 9.665264 AGTTTGTCTTTATTTCGAAGTGAATTC 57.335 29.630 3.04 0.00 36.22 2.17
1779 1802 7.393216 AGTGAATTCTGAGTTCTGCTAGATTT 58.607 34.615 13.11 0.00 0.00 2.17
1803 1826 4.220693 AGCATAACAGTATTCCAGTGCA 57.779 40.909 0.00 0.00 34.01 4.57
1930 1956 6.543831 ACAAGTGAATTTCTGTGCTTCTACTT 59.456 34.615 0.00 0.00 0.00 2.24
2031 2057 5.296035 ACTTTAGCTTATATTGCCGTGTTCC 59.704 40.000 0.00 0.00 0.00 3.62
2155 2181 6.892456 AGACATCTACTATGTTCTTCTCCACA 59.108 38.462 0.00 0.00 31.52 4.17
2246 2272 5.419155 TGATACTATCTCGGCTTATCTTGGG 59.581 44.000 0.00 0.00 0.00 4.12
2262 2288 5.578005 TCTTGGGTCTATCAGAAGTTACG 57.422 43.478 0.00 0.00 0.00 3.18
2331 2359 7.511268 TGTAATTTGTGTGGTAGAGGTTAACT 58.489 34.615 5.42 0.00 0.00 2.24
2455 2483 3.200825 TCTTCTCTCATGGGTGGATTTCC 59.799 47.826 0.00 0.00 0.00 3.13
2463 2491 2.348472 TGGGTGGATTTCCTCAGAACT 58.652 47.619 0.00 0.00 36.82 3.01
2507 2535 4.099380 CTGTTTACAAAAACGGTGTGGT 57.901 40.909 2.36 0.00 46.63 4.16
2513 2541 2.159310 ACAAAAACGGTGTGGTGTGATG 60.159 45.455 0.00 0.00 0.00 3.07
2536 2564 2.028876 CTGATGCTCATGCCCATCAAA 58.971 47.619 20.94 7.15 44.97 2.69
2540 2568 3.985019 TGCTCATGCCCATCAAATTTT 57.015 38.095 0.00 0.00 38.71 1.82
2541 2569 4.289238 TGCTCATGCCCATCAAATTTTT 57.711 36.364 0.00 0.00 38.71 1.94
2563 2591 7.558161 TTTCTGGAAGTGCTGTTGATATATG 57.442 36.000 0.00 0.00 33.76 1.78
2570 2598 8.072567 GGAAGTGCTGTTGATATATGTGAAATC 58.927 37.037 0.00 0.00 0.00 2.17
2598 2627 9.958234 GAATATAGATGCATGTACGTCATATCT 57.042 33.333 2.46 5.12 36.45 1.98
2612 2641 6.219473 ACGTCATATCTTTTCTCAGGCTATG 58.781 40.000 0.00 0.00 0.00 2.23
2619 2648 7.951347 ATCTTTTCTCAGGCTATGTCAAAAT 57.049 32.000 0.00 0.00 0.00 1.82
2632 2661 9.284968 GGCTATGTCAAAATACTGTACCATAAT 57.715 33.333 0.00 0.00 0.00 1.28
2649 2678 8.987890 GTACCATAATTGTGTTTTTGAAAGCAT 58.012 29.630 1.26 0.00 31.84 3.79
2758 2793 9.449719 GGTATATTGGATTATTGGTCCTTGTAG 57.550 37.037 0.00 0.00 36.68 2.74
2769 2804 4.993028 TGGTCCTTGTAGGCTATTTTGTT 58.007 39.130 0.00 0.00 34.61 2.83
2935 2973 1.003580 TCTGGCCTTCAGGATGTGTTC 59.996 52.381 3.32 0.00 43.53 3.18
2943 2981 2.489971 TCAGGATGTGTTCGGTTTGAC 58.510 47.619 0.00 0.00 37.40 3.18
3038 3083 2.595558 TCATGAGTCATGACCGGCT 58.404 52.632 28.18 3.38 44.60 5.52
3067 3112 5.931532 ACAAGTTTACTTCTTCATCATGCG 58.068 37.500 0.00 0.00 33.11 4.73
3110 3155 3.621268 GCGTTACCTGCATGAATAGACAA 59.379 43.478 0.00 0.00 0.00 3.18
3212 3260 4.817318 TTTTTCTGTGAAGGCCAACTTT 57.183 36.364 5.01 0.00 40.21 2.66
3252 3300 7.027778 TCTTTTCTTTGAACAAAGTAGCCTC 57.972 36.000 21.39 0.00 45.88 4.70
3253 3301 6.601613 TCTTTTCTTTGAACAAAGTAGCCTCA 59.398 34.615 21.39 3.68 45.88 3.86
3254 3302 6.377327 TTTCTTTGAACAAAGTAGCCTCAG 57.623 37.500 21.39 0.45 45.88 3.35
3255 3303 4.389374 TCTTTGAACAAAGTAGCCTCAGG 58.611 43.478 21.39 0.00 45.88 3.86
3256 3304 3.057946 CTTTGAACAAAGTAGCCTCAGGC 60.058 47.826 8.01 8.01 44.38 4.85
3270 3318 4.757594 GCCTCAGGCTCTTAGATATGATG 58.242 47.826 9.09 0.00 46.69 3.07
3271 3319 4.222588 GCCTCAGGCTCTTAGATATGATGT 59.777 45.833 9.09 0.00 46.69 3.06
3272 3320 5.279910 GCCTCAGGCTCTTAGATATGATGTT 60.280 44.000 9.09 0.00 46.69 2.71
3273 3321 6.743773 GCCTCAGGCTCTTAGATATGATGTTT 60.744 42.308 9.09 0.00 46.69 2.83
3274 3322 6.873076 CCTCAGGCTCTTAGATATGATGTTTC 59.127 42.308 0.00 0.00 0.00 2.78
3275 3323 7.365497 TCAGGCTCTTAGATATGATGTTTCA 57.635 36.000 0.00 0.00 36.00 2.69
3276 3324 7.971201 TCAGGCTCTTAGATATGATGTTTCAT 58.029 34.615 0.00 0.00 44.76 2.57
3277 3325 8.435187 TCAGGCTCTTAGATATGATGTTTCATT 58.565 33.333 0.00 0.00 42.61 2.57
3278 3326 8.504815 CAGGCTCTTAGATATGATGTTTCATTG 58.495 37.037 0.00 0.00 42.61 2.82
3279 3327 8.216423 AGGCTCTTAGATATGATGTTTCATTGT 58.784 33.333 0.00 0.00 42.61 2.71
3280 3328 8.288208 GGCTCTTAGATATGATGTTTCATTGTG 58.712 37.037 0.00 0.00 42.61 3.33
3281 3329 8.834465 GCTCTTAGATATGATGTTTCATTGTGT 58.166 33.333 0.00 0.00 42.61 3.72
3322 3400 9.725019 TCAACTCTCAAGTGTATTGTTATGAAT 57.275 29.630 0.00 0.00 35.36 2.57
3703 4080 9.334693 CTGTGTTGCTTGATAAAAGATTACTTC 57.665 33.333 0.00 0.00 35.05 3.01
3752 4192 5.694006 GCTGATGCTGTGAAGTAGTATTAGG 59.306 44.000 0.00 0.00 36.03 2.69
3790 4240 4.614535 GCTGTTCTCCTTATGCAAACACTG 60.615 45.833 0.00 0.00 0.00 3.66
3794 4244 4.973168 TCTCCTTATGCAAACACTGTCTT 58.027 39.130 0.00 0.00 0.00 3.01
3822 4272 1.165270 GGGAAGATGACGTTGTTGGG 58.835 55.000 0.00 0.00 0.00 4.12
3903 4353 3.338676 GCCGATAAAGCCGCCGAG 61.339 66.667 0.00 0.00 0.00 4.63
3906 4356 1.661821 CGATAAAGCCGCCGAGGAG 60.662 63.158 0.91 0.00 45.00 3.69
3945 4395 2.827921 GCCAAATCTTTGTGGACTGGAT 59.172 45.455 2.29 0.00 37.03 3.41
3966 4416 2.162681 GCAGTTGGTAAGCATGGAGTT 58.837 47.619 0.00 0.00 0.00 3.01
3984 4434 5.761234 TGGAGTTACTAAAATTTCTGCGTGT 59.239 36.000 0.00 0.00 0.00 4.49
3985 4435 6.261381 TGGAGTTACTAAAATTTCTGCGTGTT 59.739 34.615 0.00 0.00 0.00 3.32
3986 4436 7.441760 TGGAGTTACTAAAATTTCTGCGTGTTA 59.558 33.333 0.00 0.00 0.00 2.41
3993 4443 9.308318 ACTAAAATTTCTGCGTGTTAAAACAAT 57.692 25.926 0.00 0.00 41.21 2.71
4016 4466 9.265901 CAATAAACCTTGATCACGAATCTATCT 57.734 33.333 0.00 0.00 35.24 1.98
4017 4467 8.824159 ATAAACCTTGATCACGAATCTATCTG 57.176 34.615 0.00 0.00 35.24 2.90
4027 4477 6.062095 TCACGAATCTATCTGTAGTGGATGA 58.938 40.000 0.00 0.00 0.00 2.92
4057 4507 5.683876 AAGCATGGATAGTGAGTTACTGT 57.316 39.130 0.00 0.00 40.65 3.55
4089 4539 0.843984 TAGGCTGGCCCAGTATTTCC 59.156 55.000 13.35 4.32 36.58 3.13
4107 4557 3.584733 TCCATCTGCTAGCTAGTCTGA 57.415 47.619 21.62 20.18 0.00 3.27
4108 4558 3.218453 TCCATCTGCTAGCTAGTCTGAC 58.782 50.000 21.62 5.55 0.00 3.51
4109 4559 2.954989 CCATCTGCTAGCTAGTCTGACA 59.045 50.000 21.62 9.83 0.00 3.58
4115 4565 7.441890 TCTGCTAGCTAGTCTGACATATAAC 57.558 40.000 21.62 1.31 0.00 1.89
4116 4566 6.998673 TCTGCTAGCTAGTCTGACATATAACA 59.001 38.462 21.62 5.77 0.00 2.41
4135 4588 2.092429 ACAAGTGTGTGTGGATTCCTGT 60.092 45.455 3.95 0.00 36.31 4.00
4239 4734 1.079405 GGACGATGAACCAAGCGGA 60.079 57.895 0.00 0.00 35.59 5.54
4257 4752 1.135024 GGAGACAGCTGAGAGCAGAAG 60.135 57.143 23.35 0.00 45.56 2.85
4260 4755 0.614294 ACAGCTGAGAGCAGAAGCAT 59.386 50.000 23.35 0.00 45.56 3.79
4266 4761 3.822996 CTGAGAGCAGAAGCATTTTGTG 58.177 45.455 0.00 0.00 45.17 3.33
4268 4763 3.251729 TGAGAGCAGAAGCATTTTGTGAC 59.748 43.478 0.00 0.00 45.49 3.67
4269 4764 2.225019 AGAGCAGAAGCATTTTGTGACG 59.775 45.455 0.00 0.00 45.49 4.35
4274 4769 2.033299 AGAAGCATTTTGTGACGGTGTG 59.967 45.455 0.00 0.00 0.00 3.82
4275 4770 1.388547 AGCATTTTGTGACGGTGTGT 58.611 45.000 0.00 0.00 0.00 3.72
4278 4773 3.378742 AGCATTTTGTGACGGTGTGTTAA 59.621 39.130 0.00 0.00 0.00 2.01
4280 4775 4.663166 CATTTTGTGACGGTGTGTTAACA 58.337 39.130 3.59 3.59 0.00 2.41
4290 4785 1.018148 TGTGTTAACAGCCACGGTTG 58.982 50.000 8.98 0.00 34.28 3.77
4293 4788 1.202663 TGTTAACAGCCACGGTTGCTA 60.203 47.619 3.59 0.00 36.81 3.49
4295 4790 2.018542 TAACAGCCACGGTTGCTATC 57.981 50.000 6.38 0.00 36.81 2.08
4299 4794 0.689745 AGCCACGGTTGCTATCCCTA 60.690 55.000 4.72 0.00 37.28 3.53
4306 4801 4.038763 CACGGTTGCTATCCCTAGTCAATA 59.961 45.833 0.00 0.00 0.00 1.90
4308 4803 4.281182 CGGTTGCTATCCCTAGTCAATACT 59.719 45.833 0.00 0.00 39.91 2.12
4312 4807 4.833380 TGCTATCCCTAGTCAATACTGTCC 59.167 45.833 0.00 0.00 36.36 4.02
4318 4813 5.487488 TCCCTAGTCAATACTGTCCACAAAT 59.513 40.000 0.00 0.00 36.36 2.32
4324 4819 5.882557 GTCAATACTGTCCACAAATCAGGAT 59.117 40.000 0.00 0.00 36.11 3.24
4330 4825 3.820467 TGTCCACAAATCAGGATTGTGTC 59.180 43.478 15.71 10.17 36.11 3.67
4342 4837 2.611971 GGATTGTGTCTCGCTGTTACCA 60.612 50.000 0.00 0.00 0.00 3.25
4343 4838 1.860676 TTGTGTCTCGCTGTTACCAC 58.139 50.000 0.00 0.00 0.00 4.16
4344 4839 0.747852 TGTGTCTCGCTGTTACCACA 59.252 50.000 0.00 0.00 0.00 4.17
4502 5039 1.691163 CCCTTGGACTTGGGTTTGGTT 60.691 52.381 0.00 0.00 38.65 3.67
4506 5043 2.104170 TGGACTTGGGTTTGGTTGTTC 58.896 47.619 0.00 0.00 0.00 3.18
4530 5067 4.834892 CCAATCGGCGGCGCAAAG 62.835 66.667 34.36 23.06 0.00 2.77
4574 5111 2.167219 CACGCATGTACGGGCAGAG 61.167 63.158 8.95 0.00 37.37 3.35
4575 5112 2.348104 ACGCATGTACGGGCAGAGA 61.348 57.895 8.95 0.00 37.37 3.10
4584 5121 0.032678 ACGGGCAGAGATATCTTGCG 59.967 55.000 22.42 16.30 0.00 4.85
4626 5200 1.340248 ACTGTCTGTACGTGGGTCTTG 59.660 52.381 0.00 0.00 0.00 3.02
4627 5201 1.340248 CTGTCTGTACGTGGGTCTTGT 59.660 52.381 0.00 0.00 0.00 3.16
4673 5247 4.078516 CGGAGGGGTCGGGTTGTC 62.079 72.222 0.00 0.00 0.00 3.18
4684 5258 1.003839 GGGTTGTCTCGCACATGGA 60.004 57.895 0.00 0.00 33.90 3.41
4685 5259 1.298859 GGGTTGTCTCGCACATGGAC 61.299 60.000 0.00 0.00 33.90 4.02
4686 5260 0.602638 GGTTGTCTCGCACATGGACA 60.603 55.000 0.00 0.00 38.07 4.02
4687 5261 1.442769 GTTGTCTCGCACATGGACAT 58.557 50.000 0.00 0.00 39.30 3.06
4688 5262 1.129251 GTTGTCTCGCACATGGACATG 59.871 52.381 10.57 10.57 44.15 3.21
4689 5263 0.391528 TGTCTCGCACATGGACATGG 60.392 55.000 15.94 6.79 42.91 3.66
4690 5264 1.450134 TCTCGCACATGGACATGGC 60.450 57.895 15.94 14.09 42.91 4.40
4691 5265 1.450848 CTCGCACATGGACATGGCT 60.451 57.895 15.94 0.00 42.91 4.75
4692 5266 1.434622 CTCGCACATGGACATGGCTC 61.435 60.000 15.94 4.45 42.91 4.70
4693 5267 2.816360 CGCACATGGACATGGCTCG 61.816 63.158 15.94 11.49 42.91 5.03
4694 5268 1.746615 GCACATGGACATGGCTCGT 60.747 57.895 15.94 0.00 42.91 4.18
4695 5269 0.461870 GCACATGGACATGGCTCGTA 60.462 55.000 15.94 0.00 42.91 3.43
4696 5270 1.811558 GCACATGGACATGGCTCGTAT 60.812 52.381 15.94 0.00 42.91 3.06
4697 5271 1.869132 CACATGGACATGGCTCGTATG 59.131 52.381 15.94 1.38 42.91 2.39
4709 5283 3.444034 TGGCTCGTATGTATGGAGATAGC 59.556 47.826 0.00 0.00 0.00 2.97
4736 5310 3.689872 TGGCTTATCTAGGACTCCACT 57.310 47.619 0.00 0.00 0.00 4.00
4769 5343 2.309613 GCCATTGCATTGGATCCTGTA 58.690 47.619 27.72 0.00 39.25 2.74
4829 5406 2.825836 CCAAGGCCATCAGACGCC 60.826 66.667 5.01 2.48 46.09 5.68
4867 5444 3.446161 TCTCACGTTGATGGGGTAGTAAG 59.554 47.826 0.00 0.00 0.00 2.34
4868 5445 3.433343 TCACGTTGATGGGGTAGTAAGA 58.567 45.455 0.00 0.00 0.00 2.10
4869 5446 3.446161 TCACGTTGATGGGGTAGTAAGAG 59.554 47.826 0.00 0.00 0.00 2.85
4870 5447 2.167900 ACGTTGATGGGGTAGTAAGAGC 59.832 50.000 0.00 0.00 0.00 4.09
4871 5448 2.167693 CGTTGATGGGGTAGTAAGAGCA 59.832 50.000 0.00 0.00 0.00 4.26
4872 5449 3.181465 CGTTGATGGGGTAGTAAGAGCAT 60.181 47.826 0.00 0.00 0.00 3.79
4873 5450 4.381411 GTTGATGGGGTAGTAAGAGCATC 58.619 47.826 0.00 0.00 0.00 3.91
4885 5462 3.003740 GAGCATCTCCACTCATGCC 57.996 57.895 0.30 0.00 45.63 4.40
4886 5463 0.534652 GAGCATCTCCACTCATGCCC 60.535 60.000 0.30 0.00 45.63 5.36
4887 5464 0.987081 AGCATCTCCACTCATGCCCT 60.987 55.000 0.30 0.00 45.63 5.19
4888 5465 0.534652 GCATCTCCACTCATGCCCTC 60.535 60.000 0.00 0.00 39.70 4.30
4889 5466 0.835276 CATCTCCACTCATGCCCTCA 59.165 55.000 0.00 0.00 0.00 3.86
4890 5467 1.211212 CATCTCCACTCATGCCCTCAA 59.789 52.381 0.00 0.00 0.00 3.02
4891 5468 1.361204 TCTCCACTCATGCCCTCAAA 58.639 50.000 0.00 0.00 0.00 2.69
4892 5469 1.704628 TCTCCACTCATGCCCTCAAAA 59.295 47.619 0.00 0.00 0.00 2.44
4893 5470 2.089980 CTCCACTCATGCCCTCAAAAG 58.910 52.381 0.00 0.00 0.00 2.27
4894 5471 0.529378 CCACTCATGCCCTCAAAAGC 59.471 55.000 0.00 0.00 0.00 3.51
4895 5472 1.250328 CACTCATGCCCTCAAAAGCA 58.750 50.000 0.00 0.00 44.45 3.91
4899 5476 3.379880 TGCCCTCAAAAGCATGCC 58.620 55.556 15.66 0.00 33.08 4.40
4900 5477 2.285024 TGCCCTCAAAAGCATGCCC 61.285 57.895 15.66 0.00 33.08 5.36
4901 5478 3.022710 GCCCTCAAAAGCATGCCCC 62.023 63.158 15.66 0.00 0.00 5.80
4902 5479 2.361567 CCCTCAAAAGCATGCCCCC 61.362 63.158 15.66 0.00 0.00 5.40
4903 5480 1.610086 CCTCAAAAGCATGCCCCCA 60.610 57.895 15.66 0.00 0.00 4.96
4904 5481 1.193462 CCTCAAAAGCATGCCCCCAA 61.193 55.000 15.66 0.00 0.00 4.12
4905 5482 0.248289 CTCAAAAGCATGCCCCCAAG 59.752 55.000 15.66 3.23 0.00 3.61
4906 5483 0.178938 TCAAAAGCATGCCCCCAAGA 60.179 50.000 15.66 2.43 0.00 3.02
4907 5484 0.686224 CAAAAGCATGCCCCCAAGAA 59.314 50.000 15.66 0.00 0.00 2.52
4908 5485 0.978907 AAAAGCATGCCCCCAAGAAG 59.021 50.000 15.66 0.00 0.00 2.85
4909 5486 1.547472 AAAGCATGCCCCCAAGAAGC 61.547 55.000 15.66 0.00 0.00 3.86
4910 5487 3.464494 GCATGCCCCCAAGAAGCC 61.464 66.667 6.36 0.00 0.00 4.35
4911 5488 2.761213 CATGCCCCCAAGAAGCCC 60.761 66.667 0.00 0.00 0.00 5.19
4912 5489 3.275271 ATGCCCCCAAGAAGCCCA 61.275 61.111 0.00 0.00 0.00 5.36
4913 5490 3.607084 ATGCCCCCAAGAAGCCCAC 62.607 63.158 0.00 0.00 0.00 4.61
4915 5492 4.382541 CCCCCAAGAAGCCCACCC 62.383 72.222 0.00 0.00 0.00 4.61
4916 5493 3.589542 CCCCAAGAAGCCCACCCA 61.590 66.667 0.00 0.00 0.00 4.51
4917 5494 2.525592 CCCAAGAAGCCCACCCAA 59.474 61.111 0.00 0.00 0.00 4.12
4918 5495 1.607467 CCCAAGAAGCCCACCCAAG 60.607 63.158 0.00 0.00 0.00 3.61
4919 5496 2.278330 CCAAGAAGCCCACCCAAGC 61.278 63.158 0.00 0.00 0.00 4.01
4920 5497 2.118294 AAGAAGCCCACCCAAGCC 59.882 61.111 0.00 0.00 0.00 4.35
4921 5498 2.777960 AAGAAGCCCACCCAAGCCA 61.778 57.895 0.00 0.00 0.00 4.75
4922 5499 2.991540 GAAGCCCACCCAAGCCAC 60.992 66.667 0.00 0.00 0.00 5.01
4923 5500 3.511610 AAGCCCACCCAAGCCACT 61.512 61.111 0.00 0.00 0.00 4.00
4924 5501 3.086764 AAGCCCACCCAAGCCACTT 62.087 57.895 0.00 0.00 0.00 3.16
4925 5502 2.524148 GCCCACCCAAGCCACTTT 60.524 61.111 0.00 0.00 0.00 2.66
4926 5503 2.140138 GCCCACCCAAGCCACTTTT 61.140 57.895 0.00 0.00 0.00 2.27
4927 5504 1.695114 GCCCACCCAAGCCACTTTTT 61.695 55.000 0.00 0.00 0.00 1.94
4928 5505 0.106521 CCCACCCAAGCCACTTTTTG 59.893 55.000 0.00 0.00 0.00 2.44
4932 5509 1.693606 ACCCAAGCCACTTTTTGGATG 59.306 47.619 4.89 0.00 46.23 3.51
4933 5510 1.608801 CCCAAGCCACTTTTTGGATGC 60.609 52.381 4.89 0.00 46.23 3.91
4934 5511 1.608801 CCAAGCCACTTTTTGGATGCC 60.609 52.381 0.00 0.00 46.23 4.40
4935 5512 0.318120 AAGCCACTTTTTGGATGCCG 59.682 50.000 0.00 0.00 46.23 5.69
4936 5513 3.039831 AAGCCACTTTTTGGATGCCGG 62.040 52.381 0.00 0.00 46.23 6.13
4937 5514 4.576993 CACTTTTTGGATGCCGGC 57.423 55.556 22.73 22.73 0.00 6.13
4938 5515 1.444212 CACTTTTTGGATGCCGGCG 60.444 57.895 23.90 6.26 0.00 6.46
4939 5516 2.181525 CTTTTTGGATGCCGGCGG 59.818 61.111 24.35 24.35 0.00 6.13
4940 5517 3.355203 CTTTTTGGATGCCGGCGGG 62.355 63.158 29.48 9.71 0.00 6.13
4961 5538 3.236632 CAAAAAGTGCCCTATTGGAGC 57.763 47.619 0.00 0.00 35.39 4.70
4962 5539 1.852633 AAAAGTGCCCTATTGGAGCC 58.147 50.000 0.00 0.00 35.39 4.70
4963 5540 0.033109 AAAGTGCCCTATTGGAGCCC 60.033 55.000 0.00 0.00 35.39 5.19
4964 5541 1.937924 AAGTGCCCTATTGGAGCCCC 61.938 60.000 0.00 0.00 35.39 5.80
4965 5542 2.286808 TGCCCTATTGGAGCCCCA 60.287 61.111 0.00 0.00 41.64 4.96
4966 5543 2.386100 TGCCCTATTGGAGCCCCAG 61.386 63.158 0.00 0.00 44.60 4.45
4967 5544 2.078665 GCCCTATTGGAGCCCCAGA 61.079 63.158 0.00 0.00 44.60 3.86
4968 5545 1.645402 GCCCTATTGGAGCCCCAGAA 61.645 60.000 0.00 0.00 44.60 3.02
4969 5546 0.926293 CCCTATTGGAGCCCCAGAAA 59.074 55.000 0.00 0.00 44.60 2.52
4970 5547 1.410224 CCCTATTGGAGCCCCAGAAAC 60.410 57.143 0.00 0.00 44.60 2.78
4971 5548 1.410224 CCTATTGGAGCCCCAGAAACC 60.410 57.143 0.00 0.00 44.60 3.27
4972 5549 1.566231 CTATTGGAGCCCCAGAAACCT 59.434 52.381 0.00 0.00 44.60 3.50
4973 5550 0.040204 ATTGGAGCCCCAGAAACCTG 59.960 55.000 0.00 0.00 44.60 4.00
4974 5551 1.360393 TTGGAGCCCCAGAAACCTGT 61.360 55.000 0.00 0.00 44.60 4.00
4975 5552 1.360393 TGGAGCCCCAGAAACCTGTT 61.360 55.000 0.00 0.00 37.58 3.16
4976 5553 0.178961 GGAGCCCCAGAAACCTGTTT 60.179 55.000 0.00 0.00 35.14 2.83
4977 5554 1.704641 GAGCCCCAGAAACCTGTTTT 58.295 50.000 0.00 0.00 32.11 2.43
4978 5555 2.490168 GGAGCCCCAGAAACCTGTTTTA 60.490 50.000 0.00 0.00 32.11 1.52
4979 5556 2.557056 GAGCCCCAGAAACCTGTTTTAC 59.443 50.000 0.00 0.00 32.11 2.01
4980 5557 1.268625 GCCCCAGAAACCTGTTTTACG 59.731 52.381 0.00 0.00 32.11 3.18
4981 5558 1.268625 CCCCAGAAACCTGTTTTACGC 59.731 52.381 0.00 0.00 32.11 4.42
4982 5559 1.268625 CCCAGAAACCTGTTTTACGCC 59.731 52.381 0.00 0.00 32.11 5.68
4983 5560 1.069500 CCAGAAACCTGTTTTACGCCG 60.069 52.381 0.00 0.00 32.11 6.46
4984 5561 1.069500 CAGAAACCTGTTTTACGCCGG 60.069 52.381 0.00 0.00 32.11 6.13
4985 5562 1.202675 AGAAACCTGTTTTACGCCGGA 60.203 47.619 5.05 0.00 32.11 5.14
4986 5563 1.808343 GAAACCTGTTTTACGCCGGAT 59.192 47.619 5.05 0.00 32.11 4.18
4987 5564 1.900245 AACCTGTTTTACGCCGGATT 58.100 45.000 5.05 0.00 0.00 3.01
4988 5565 1.900245 ACCTGTTTTACGCCGGATTT 58.100 45.000 5.05 0.00 0.00 2.17
4989 5566 1.538075 ACCTGTTTTACGCCGGATTTG 59.462 47.619 5.05 0.00 0.00 2.32
4990 5567 1.135517 CCTGTTTTACGCCGGATTTGG 60.136 52.381 5.05 0.00 0.00 3.28
4997 5574 3.274067 GCCGGATTTGGCGAAAGT 58.726 55.556 5.05 0.00 46.75 2.66
4998 5575 1.584495 GCCGGATTTGGCGAAAGTT 59.416 52.632 5.05 0.00 46.75 2.66
4999 5576 0.806241 GCCGGATTTGGCGAAAGTTA 59.194 50.000 5.05 0.00 46.75 2.24
5000 5577 1.466866 GCCGGATTTGGCGAAAGTTAC 60.467 52.381 5.05 0.00 46.75 2.50
5001 5578 1.131693 CCGGATTTGGCGAAAGTTACC 59.868 52.381 0.00 0.69 0.00 2.85
5002 5579 1.201987 CGGATTTGGCGAAAGTTACCG 60.202 52.381 13.57 13.57 0.00 4.02
5007 5584 4.156622 GCGAAAGTTACCGCCGGC 62.157 66.667 19.07 19.07 45.06 6.13
5008 5585 2.739287 CGAAAGTTACCGCCGGCA 60.739 61.111 28.98 3.37 0.00 5.69
5009 5586 2.865308 GAAAGTTACCGCCGGCAC 59.135 61.111 28.98 17.32 0.00 5.01
5010 5587 1.962306 GAAAGTTACCGCCGGCACA 60.962 57.895 28.98 7.48 0.00 4.57
5011 5588 2.178892 GAAAGTTACCGCCGGCACAC 62.179 60.000 28.98 16.29 0.00 3.82
5012 5589 4.692475 AGTTACCGCCGGCACACC 62.692 66.667 28.98 9.70 0.00 4.16
5021 5598 4.904590 CGGCACACCCACCCCAAA 62.905 66.667 0.00 0.00 0.00 3.28
5022 5599 3.230990 GGCACACCCACCCCAAAC 61.231 66.667 0.00 0.00 0.00 2.93
5023 5600 3.230990 GCACACCCACCCCAAACC 61.231 66.667 0.00 0.00 0.00 3.27
5024 5601 2.523168 CACACCCACCCCAAACCC 60.523 66.667 0.00 0.00 0.00 4.11
5025 5602 3.030611 ACACCCACCCCAAACCCA 61.031 61.111 0.00 0.00 0.00 4.51
5026 5603 2.203625 CACCCACCCCAAACCCAG 60.204 66.667 0.00 0.00 0.00 4.45
5027 5604 4.233558 ACCCACCCCAAACCCAGC 62.234 66.667 0.00 0.00 0.00 4.85
5063 5640 4.778143 GCTGGGGACGCCGACATT 62.778 66.667 3.81 0.00 0.00 2.71
5064 5641 2.046314 CTGGGGACGCCGACATTT 60.046 61.111 3.81 0.00 0.00 2.32
5065 5642 2.046700 TGGGGACGCCGACATTTC 60.047 61.111 3.81 0.00 0.00 2.17
5066 5643 2.267961 GGGGACGCCGACATTTCT 59.732 61.111 0.00 0.00 0.00 2.52
5067 5644 1.376812 GGGGACGCCGACATTTCTT 60.377 57.895 0.00 0.00 0.00 2.52
5068 5645 0.958876 GGGGACGCCGACATTTCTTT 60.959 55.000 0.00 0.00 0.00 2.52
5069 5646 0.879090 GGGACGCCGACATTTCTTTT 59.121 50.000 0.00 0.00 0.00 2.27
5070 5647 1.268625 GGGACGCCGACATTTCTTTTT 59.731 47.619 0.00 0.00 0.00 1.94
5086 5663 2.831859 TTTTTCATGCACAGGCCCA 58.168 47.368 0.00 0.00 40.13 5.36
5087 5664 1.350071 TTTTTCATGCACAGGCCCAT 58.650 45.000 0.00 0.00 40.13 4.00
5088 5665 1.350071 TTTTCATGCACAGGCCCATT 58.650 45.000 0.00 0.00 40.13 3.16
5089 5666 1.350071 TTTCATGCACAGGCCCATTT 58.650 45.000 0.00 0.00 40.13 2.32
5090 5667 0.609151 TTCATGCACAGGCCCATTTG 59.391 50.000 0.00 0.00 40.13 2.32
5091 5668 1.448893 CATGCACAGGCCCATTTGC 60.449 57.895 0.00 3.51 40.13 3.68
5100 5677 2.761213 CCCATTTGCCAGCCCCTC 60.761 66.667 0.00 0.00 0.00 4.30
5101 5678 2.361771 CCATTTGCCAGCCCCTCT 59.638 61.111 0.00 0.00 0.00 3.69
5102 5679 1.755783 CCATTTGCCAGCCCCTCTC 60.756 63.158 0.00 0.00 0.00 3.20
5103 5680 1.305623 CATTTGCCAGCCCCTCTCT 59.694 57.895 0.00 0.00 0.00 3.10
5104 5681 0.750911 CATTTGCCAGCCCCTCTCTC 60.751 60.000 0.00 0.00 0.00 3.20
5105 5682 0.918310 ATTTGCCAGCCCCTCTCTCT 60.918 55.000 0.00 0.00 0.00 3.10
5106 5683 1.557269 TTTGCCAGCCCCTCTCTCTC 61.557 60.000 0.00 0.00 0.00 3.20
5107 5684 3.160748 GCCAGCCCCTCTCTCTCC 61.161 72.222 0.00 0.00 0.00 3.71
5108 5685 2.695597 CCAGCCCCTCTCTCTCCT 59.304 66.667 0.00 0.00 0.00 3.69
5109 5686 1.457455 CCAGCCCCTCTCTCTCCTC 60.457 68.421 0.00 0.00 0.00 3.71
5110 5687 1.620259 CAGCCCCTCTCTCTCCTCT 59.380 63.158 0.00 0.00 0.00 3.69
5111 5688 0.468029 CAGCCCCTCTCTCTCCTCTC 60.468 65.000 0.00 0.00 0.00 3.20
5112 5689 1.152546 GCCCCTCTCTCTCCTCTCC 60.153 68.421 0.00 0.00 0.00 3.71
5113 5690 1.655114 GCCCCTCTCTCTCCTCTCCT 61.655 65.000 0.00 0.00 0.00 3.69
5114 5691 0.933700 CCCCTCTCTCTCCTCTCCTT 59.066 60.000 0.00 0.00 0.00 3.36
5115 5692 1.290732 CCCCTCTCTCTCCTCTCCTTT 59.709 57.143 0.00 0.00 0.00 3.11
5116 5693 2.666317 CCCTCTCTCTCCTCTCCTTTC 58.334 57.143 0.00 0.00 0.00 2.62
5117 5694 2.244769 CCCTCTCTCTCCTCTCCTTTCT 59.755 54.545 0.00 0.00 0.00 2.52
5118 5695 3.555966 CCTCTCTCTCCTCTCCTTTCTC 58.444 54.545 0.00 0.00 0.00 2.87
5119 5696 3.203040 CCTCTCTCTCCTCTCCTTTCTCT 59.797 52.174 0.00 0.00 0.00 3.10
5120 5697 4.455606 CTCTCTCTCCTCTCCTTTCTCTC 58.544 52.174 0.00 0.00 0.00 3.20
5121 5698 4.111577 TCTCTCTCCTCTCCTTTCTCTCT 58.888 47.826 0.00 0.00 0.00 3.10
5122 5699 4.540099 TCTCTCTCCTCTCCTTTCTCTCTT 59.460 45.833 0.00 0.00 0.00 2.85
5123 5700 5.015178 TCTCTCTCCTCTCCTTTCTCTCTTT 59.985 44.000 0.00 0.00 0.00 2.52
5124 5701 5.650283 TCTCTCCTCTCCTTTCTCTCTTTT 58.350 41.667 0.00 0.00 0.00 2.27
5125 5702 5.714806 TCTCTCCTCTCCTTTCTCTCTTTTC 59.285 44.000 0.00 0.00 0.00 2.29
5126 5703 5.650283 TCTCCTCTCCTTTCTCTCTTTTCT 58.350 41.667 0.00 0.00 0.00 2.52
5127 5704 6.081356 TCTCCTCTCCTTTCTCTCTTTTCTT 58.919 40.000 0.00 0.00 0.00 2.52
5128 5705 6.556874 TCTCCTCTCCTTTCTCTCTTTTCTTT 59.443 38.462 0.00 0.00 0.00 2.52
5129 5706 6.764379 TCCTCTCCTTTCTCTCTTTTCTTTC 58.236 40.000 0.00 0.00 0.00 2.62
5130 5707 6.556874 TCCTCTCCTTTCTCTCTTTTCTTTCT 59.443 38.462 0.00 0.00 0.00 2.52
5131 5708 6.873605 CCTCTCCTTTCTCTCTTTTCTTTCTC 59.126 42.308 0.00 0.00 0.00 2.87
5132 5709 6.764379 TCTCCTTTCTCTCTTTTCTTTCTCC 58.236 40.000 0.00 0.00 0.00 3.71
5133 5710 6.556874 TCTCCTTTCTCTCTTTTCTTTCTCCT 59.443 38.462 0.00 0.00 0.00 3.69
5134 5711 6.764379 TCCTTTCTCTCTTTTCTTTCTCCTC 58.236 40.000 0.00 0.00 0.00 3.71
5135 5712 6.556874 TCCTTTCTCTCTTTTCTTTCTCCTCT 59.443 38.462 0.00 0.00 0.00 3.69
5136 5713 6.873605 CCTTTCTCTCTTTTCTTTCTCCTCTC 59.126 42.308 0.00 0.00 0.00 3.20
5137 5714 7.256296 CCTTTCTCTCTTTTCTTTCTCCTCTCT 60.256 40.741 0.00 0.00 0.00 3.10
5138 5715 6.834168 TCTCTCTTTTCTTTCTCCTCTCTC 57.166 41.667 0.00 0.00 0.00 3.20
5139 5716 5.714806 TCTCTCTTTTCTTTCTCCTCTCTCC 59.285 44.000 0.00 0.00 0.00 3.71
5140 5717 5.650283 TCTCTTTTCTTTCTCCTCTCTCCT 58.350 41.667 0.00 0.00 0.00 3.69
5141 5718 5.714806 TCTCTTTTCTTTCTCCTCTCTCCTC 59.285 44.000 0.00 0.00 0.00 3.71
5142 5719 5.650283 TCTTTTCTTTCTCCTCTCTCCTCT 58.350 41.667 0.00 0.00 0.00 3.69
5143 5720 5.714806 TCTTTTCTTTCTCCTCTCTCCTCTC 59.285 44.000 0.00 0.00 0.00 3.20
5144 5721 3.662759 TCTTTCTCCTCTCTCCTCTCC 57.337 52.381 0.00 0.00 0.00 3.71
5145 5722 3.197983 TCTTTCTCCTCTCTCCTCTCCT 58.802 50.000 0.00 0.00 0.00 3.69
5146 5723 3.596046 TCTTTCTCCTCTCTCCTCTCCTT 59.404 47.826 0.00 0.00 0.00 3.36
5147 5724 4.045334 TCTTTCTCCTCTCTCCTCTCCTTT 59.955 45.833 0.00 0.00 0.00 3.11
5148 5725 4.412060 TTCTCCTCTCTCCTCTCCTTTT 57.588 45.455 0.00 0.00 0.00 2.27
5149 5726 3.976015 TCTCCTCTCTCCTCTCCTTTTC 58.024 50.000 0.00 0.00 0.00 2.29
5150 5727 3.031013 CTCCTCTCTCCTCTCCTTTTCC 58.969 54.545 0.00 0.00 0.00 3.13
5151 5728 2.657459 TCCTCTCTCCTCTCCTTTTCCT 59.343 50.000 0.00 0.00 0.00 3.36
5152 5729 3.078305 TCCTCTCTCCTCTCCTTTTCCTT 59.922 47.826 0.00 0.00 0.00 3.36
5153 5730 3.450817 CCTCTCTCCTCTCCTTTTCCTTC 59.549 52.174 0.00 0.00 0.00 3.46
5154 5731 3.445987 TCTCTCCTCTCCTTTTCCTTCC 58.554 50.000 0.00 0.00 0.00 3.46
5155 5732 3.177228 CTCTCCTCTCCTTTTCCTTCCA 58.823 50.000 0.00 0.00 0.00 3.53
5156 5733 2.907042 TCTCCTCTCCTTTTCCTTCCAC 59.093 50.000 0.00 0.00 0.00 4.02
5157 5734 1.985895 TCCTCTCCTTTTCCTTCCACC 59.014 52.381 0.00 0.00 0.00 4.61
5158 5735 1.705186 CCTCTCCTTTTCCTTCCACCA 59.295 52.381 0.00 0.00 0.00 4.17
5159 5736 2.553247 CCTCTCCTTTTCCTTCCACCAC 60.553 54.545 0.00 0.00 0.00 4.16
5160 5737 1.423921 TCTCCTTTTCCTTCCACCACC 59.576 52.381 0.00 0.00 0.00 4.61
5161 5738 1.425448 CTCCTTTTCCTTCCACCACCT 59.575 52.381 0.00 0.00 0.00 4.00
5162 5739 2.642807 CTCCTTTTCCTTCCACCACCTA 59.357 50.000 0.00 0.00 0.00 3.08
5163 5740 2.374170 TCCTTTTCCTTCCACCACCTAC 59.626 50.000 0.00 0.00 0.00 3.18
5164 5741 2.554564 CCTTTTCCTTCCACCACCTACC 60.555 54.545 0.00 0.00 0.00 3.18
5165 5742 1.822425 TTTCCTTCCACCACCTACCA 58.178 50.000 0.00 0.00 0.00 3.25
5166 5743 1.061546 TTCCTTCCACCACCTACCAC 58.938 55.000 0.00 0.00 0.00 4.16
5167 5744 0.104882 TCCTTCCACCACCTACCACA 60.105 55.000 0.00 0.00 0.00 4.17
5168 5745 0.036306 CCTTCCACCACCTACCACAC 59.964 60.000 0.00 0.00 0.00 3.82
5169 5746 0.762418 CTTCCACCACCTACCACACA 59.238 55.000 0.00 0.00 0.00 3.72
5170 5747 0.470766 TTCCACCACCTACCACACAC 59.529 55.000 0.00 0.00 0.00 3.82
5171 5748 0.691413 TCCACCACCTACCACACACA 60.691 55.000 0.00 0.00 0.00 3.72
5172 5749 0.250295 CCACCACCTACCACACACAG 60.250 60.000 0.00 0.00 0.00 3.66
5173 5750 0.884704 CACCACCTACCACACACAGC 60.885 60.000 0.00 0.00 0.00 4.40
5174 5751 1.302511 CCACCTACCACACACAGCC 60.303 63.158 0.00 0.00 0.00 4.85
5175 5752 1.667830 CACCTACCACACACAGCCG 60.668 63.158 0.00 0.00 0.00 5.52
5176 5753 2.047274 CCTACCACACACAGCCGG 60.047 66.667 0.00 0.00 0.00 6.13
5177 5754 2.579657 CCTACCACACACAGCCGGA 61.580 63.158 5.05 0.00 0.00 5.14
5178 5755 1.079819 CTACCACACACAGCCGGAG 60.080 63.158 5.05 0.00 0.00 4.63
5179 5756 3.234630 TACCACACACAGCCGGAGC 62.235 63.158 5.05 0.00 40.32 4.70
5205 5782 3.813724 CATGGCTGGGGAGGGGAC 61.814 72.222 0.00 0.00 0.00 4.46
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
53 54 3.802948 ATGTCCTGATCCGTACAAGAC 57.197 47.619 0.00 0.00 31.70 3.01
133 134 2.363306 ACCAGATCAGGTTTTGCACA 57.637 45.000 3.50 0.00 39.34 4.57
152 153 1.143277 TCCTCGGTTACAAGGCCAAAA 59.857 47.619 5.01 0.00 32.37 2.44
220 222 9.952188 GAAGAAATATTAAGGGTGTATTGAAGC 57.048 33.333 0.00 0.00 0.00 3.86
240 242 5.567224 GCCATGATCAAATGTGTGGAAGAAA 60.567 40.000 13.76 0.00 0.00 2.52
264 266 1.066858 ACTCCATACTTGTCGTGCTGG 60.067 52.381 0.00 0.00 33.42 4.85
329 331 1.893808 CCTGGTGTTCTTGCAGCGT 60.894 57.895 0.00 0.00 39.49 5.07
364 366 5.246307 ACTACCTGATTGTGGCTTTAGAAC 58.754 41.667 0.00 0.00 0.00 3.01
415 421 9.218359 CGCAAATTAATGATCATGATACTATGC 57.782 33.333 9.46 12.65 0.00 3.14
526 532 9.664777 ATGTACTGTTAGTAGGGTTATTATGGA 57.335 33.333 0.00 0.00 30.12 3.41
689 695 4.357279 AGCTGGAGGTGGCCAAGC 62.357 66.667 17.05 17.05 37.52 4.01
897 903 0.390998 TCATCGCACGAAAGGCATCA 60.391 50.000 0.00 0.00 0.00 3.07
904 910 0.516877 CAGCCTTTCATCGCACGAAA 59.483 50.000 0.00 0.00 0.00 3.46
905 911 1.298157 CCAGCCTTTCATCGCACGAA 61.298 55.000 0.00 0.00 0.00 3.85
906 912 1.741401 CCAGCCTTTCATCGCACGA 60.741 57.895 0.00 0.00 0.00 4.35
907 913 1.699656 CTCCAGCCTTTCATCGCACG 61.700 60.000 0.00 0.00 0.00 5.34
908 914 0.391661 TCTCCAGCCTTTCATCGCAC 60.392 55.000 0.00 0.00 0.00 5.34
910 916 1.012841 CTTCTCCAGCCTTTCATCGC 58.987 55.000 0.00 0.00 0.00 4.58
911 917 2.680312 TCTTCTCCAGCCTTTCATCG 57.320 50.000 0.00 0.00 0.00 3.84
912 918 5.066246 CAGATTTCTTCTCCAGCCTTTCATC 59.934 44.000 0.00 0.00 29.93 2.92
913 919 4.948621 CAGATTTCTTCTCCAGCCTTTCAT 59.051 41.667 0.00 0.00 29.93 2.57
914 920 4.330250 CAGATTTCTTCTCCAGCCTTTCA 58.670 43.478 0.00 0.00 29.93 2.69
946 954 0.114364 AAATCCCCAAAGCCCTCGTT 59.886 50.000 0.00 0.00 0.00 3.85
1047 1066 3.649502 GCTTTACTGGGCTAAGGGGTATA 59.350 47.826 0.00 0.00 0.00 1.47
1090 1112 0.413037 TAACCCCCTCCAACCGTAGA 59.587 55.000 0.00 0.00 0.00 2.59
1101 1123 0.402504 TGTTTCGCACATAACCCCCT 59.597 50.000 0.00 0.00 0.00 4.79
1115 1137 6.089417 CCAAAGCGGAAAATAACTGATGTTTC 59.911 38.462 0.00 0.00 35.66 2.78
1123 1145 2.492088 GGAGCCAAAGCGGAAAATAACT 59.508 45.455 0.00 0.00 46.67 2.24
1128 1150 1.613255 CCTAGGAGCCAAAGCGGAAAA 60.613 52.381 1.05 0.00 46.67 2.29
1139 1161 4.281947 GTACGCCGCCTAGGAGCC 62.282 72.222 14.75 0.00 44.30 4.70
1166 1188 2.593148 ATTGTTCACACCGCGCCA 60.593 55.556 0.00 0.00 0.00 5.69
1181 1203 0.616111 AGTCCGACAGAGAGCCCATT 60.616 55.000 0.40 0.00 0.00 3.16
1281 1303 1.227089 CGACGCCCTCCATCTTCTG 60.227 63.158 0.00 0.00 0.00 3.02
1394 1416 2.599677 AGAAGGGTGAACGAAGAGAGT 58.400 47.619 0.00 0.00 0.00 3.24
1478 1500 3.091203 CAAACGATTGAAGCGAGATGCG 61.091 50.000 10.69 0.00 43.57 4.73
1741 1764 8.713271 ACTCAGAATTCACTTCGAAATAAAGAC 58.287 33.333 8.44 0.00 38.98 3.01
1755 1778 7.548780 AGAAATCTAGCAGAACTCAGAATTCAC 59.451 37.037 8.44 0.00 32.00 3.18
1779 1802 5.128663 TGCACTGGAATACTGTTATGCTAGA 59.871 40.000 0.00 0.00 28.35 2.43
1803 1826 7.570132 TGTAACAGGTTATGGCATATTACACT 58.430 34.615 19.30 9.20 0.00 3.55
1930 1956 2.037901 TGCAAAAGACAATGGAAGCCA 58.962 42.857 0.00 0.00 38.19 4.75
2138 2164 7.680730 ACATACTTTGTGGAGAAGAACATAGT 58.319 34.615 4.71 4.71 40.31 2.12
2139 2165 9.823647 ATACATACTTTGTGGAGAAGAACATAG 57.176 33.333 0.00 0.00 39.48 2.23
2303 2329 5.937111 ACCTCTACCACACAAATTACAAGT 58.063 37.500 0.00 0.00 0.00 3.16
2304 2330 6.877611 AACCTCTACCACACAAATTACAAG 57.122 37.500 0.00 0.00 0.00 3.16
2310 2338 7.120726 GCATAAGTTAACCTCTACCACACAAAT 59.879 37.037 0.88 0.00 0.00 2.32
2312 2340 5.935789 GCATAAGTTAACCTCTACCACACAA 59.064 40.000 0.88 0.00 0.00 3.33
2331 2359 4.467438 TCTTCCTCTGTCACATGAGCATAA 59.533 41.667 0.00 0.00 0.00 1.90
2478 2506 7.218583 ACACCGTTTTTGTAAACAGTAAATTCG 59.781 33.333 0.00 0.00 43.05 3.34
2492 2520 1.535833 TCACACCACACCGTTTTTGT 58.464 45.000 0.00 0.00 0.00 2.83
2507 2535 3.940229 TGAGCATCAGCACATCACA 57.060 47.368 0.00 0.00 42.56 3.58
2536 2564 5.796424 ATCAACAGCACTTCCAGAAAAAT 57.204 34.783 0.00 0.00 0.00 1.82
2540 2568 6.539826 CACATATATCAACAGCACTTCCAGAA 59.460 38.462 0.00 0.00 0.00 3.02
2541 2569 6.051074 CACATATATCAACAGCACTTCCAGA 58.949 40.000 0.00 0.00 0.00 3.86
2570 2598 9.741647 ATATGACGTACATGCATCTATATTCAG 57.258 33.333 0.00 0.00 39.77 3.02
2598 2627 7.665559 ACAGTATTTTGACATAGCCTGAGAAAA 59.334 33.333 0.00 0.00 0.00 2.29
2707 2736 6.040842 CCTGTTTCATCGGATTATTCCCATTT 59.959 38.462 0.00 0.00 39.01 2.32
2781 2816 9.699703 GTGTTTTGGCCTTAATTAATTACTTGA 57.300 29.630 3.32 0.00 0.00 3.02
2841 2877 4.082571 CCAGTGAGGCAAGGTAATTTTCAG 60.083 45.833 0.00 0.00 0.00 3.02
2935 2973 0.879090 GCAAACCTAGGGTCAAACCG 59.121 55.000 14.81 0.00 39.83 4.44
2943 2981 2.132089 TTGGTCGGGCAAACCTAGGG 62.132 60.000 14.81 0.00 37.69 3.53
2993 3038 7.826690 ACATTTGACAATACCAAACCATCTAC 58.173 34.615 0.00 0.00 36.48 2.59
3038 3083 4.193090 TGAAGAAGTAAACTTGTCGCCAA 58.807 39.130 0.00 0.00 36.11 4.52
3067 3112 3.242446 GCTTGATTTACGGCTGCTTAGTC 60.242 47.826 0.00 0.00 0.00 2.59
3079 3124 4.094294 TCATGCAGGTAACGCTTGATTTAC 59.906 41.667 0.00 0.00 41.49 2.01
3170 3218 3.923273 AAGGGGAGGGACTTGAATTTT 57.077 42.857 0.00 0.00 41.55 1.82
3171 3219 3.923273 AAAGGGGAGGGACTTGAATTT 57.077 42.857 0.00 0.00 41.55 1.82
3252 3300 8.504815 CAATGAAACATCATATCTAAGAGCCTG 58.495 37.037 0.00 0.00 0.00 4.85
3253 3301 8.216423 ACAATGAAACATCATATCTAAGAGCCT 58.784 33.333 0.00 0.00 0.00 4.58
3254 3302 8.288208 CACAATGAAACATCATATCTAAGAGCC 58.712 37.037 0.00 0.00 0.00 4.70
3255 3303 8.834465 ACACAATGAAACATCATATCTAAGAGC 58.166 33.333 0.00 0.00 0.00 4.09
3261 3309 9.671279 TCACTAACACAATGAAACATCATATCT 57.329 29.630 0.00 0.00 0.00 1.98
3265 3313 9.630098 GAAATCACTAACACAATGAAACATCAT 57.370 29.630 0.00 0.00 0.00 2.45
3266 3314 8.628280 TGAAATCACTAACACAATGAAACATCA 58.372 29.630 0.00 0.00 0.00 3.07
3267 3315 9.630098 ATGAAATCACTAACACAATGAAACATC 57.370 29.630 0.00 0.00 0.00 3.06
3268 3316 9.414295 CATGAAATCACTAACACAATGAAACAT 57.586 29.630 0.00 0.00 0.00 2.71
3269 3317 8.412456 ACATGAAATCACTAACACAATGAAACA 58.588 29.630 0.00 0.00 0.00 2.83
3270 3318 8.801715 ACATGAAATCACTAACACAATGAAAC 57.198 30.769 0.00 0.00 0.00 2.78
3271 3319 9.462174 GAACATGAAATCACTAACACAATGAAA 57.538 29.630 0.00 0.00 0.00 2.69
3272 3320 8.628280 TGAACATGAAATCACTAACACAATGAA 58.372 29.630 0.00 0.00 0.00 2.57
3273 3321 8.164058 TGAACATGAAATCACTAACACAATGA 57.836 30.769 0.00 0.00 0.00 2.57
3274 3322 8.693504 GTTGAACATGAAATCACTAACACAATG 58.306 33.333 0.00 0.00 0.00 2.82
3275 3323 8.632679 AGTTGAACATGAAATCACTAACACAAT 58.367 29.630 0.00 0.00 0.00 2.71
3276 3324 7.995289 AGTTGAACATGAAATCACTAACACAA 58.005 30.769 0.00 0.00 0.00 3.33
3277 3325 7.498900 AGAGTTGAACATGAAATCACTAACACA 59.501 33.333 0.00 0.00 0.00 3.72
3278 3326 7.865707 AGAGTTGAACATGAAATCACTAACAC 58.134 34.615 0.00 0.00 0.00 3.32
3279 3327 7.714813 TGAGAGTTGAACATGAAATCACTAACA 59.285 33.333 0.00 3.61 0.00 2.41
3280 3328 8.087982 TGAGAGTTGAACATGAAATCACTAAC 57.912 34.615 0.00 0.00 0.00 2.34
3281 3329 8.675705 TTGAGAGTTGAACATGAAATCACTAA 57.324 30.769 0.00 0.00 0.00 2.24
3322 3400 3.460340 TGTACCTCTCCTCAAAACCCAAA 59.540 43.478 0.00 0.00 0.00 3.28
3363 3441 0.831307 ATCTACTTTGCCTCCCGTCC 59.169 55.000 0.00 0.00 0.00 4.79
3364 3442 1.480954 TCATCTACTTTGCCTCCCGTC 59.519 52.381 0.00 0.00 0.00 4.79
3365 3443 1.568504 TCATCTACTTTGCCTCCCGT 58.431 50.000 0.00 0.00 0.00 5.28
3366 3444 2.093447 AGTTCATCTACTTTGCCTCCCG 60.093 50.000 0.00 0.00 0.00 5.14
3367 3445 3.636153 AGTTCATCTACTTTGCCTCCC 57.364 47.619 0.00 0.00 0.00 4.30
3752 4192 4.981794 AGAACAGCACAAAACAACAGTAC 58.018 39.130 0.00 0.00 0.00 2.73
3790 4240 4.012374 TCATCTTCCCATCTGCAAAAGAC 58.988 43.478 0.00 0.00 37.88 3.01
3794 4244 2.290260 ACGTCATCTTCCCATCTGCAAA 60.290 45.455 0.00 0.00 0.00 3.68
3822 4272 5.017294 TCCCATGTTTCTTTTGAACCAAC 57.983 39.130 0.00 0.00 34.57 3.77
3900 4350 7.691430 CATATACTTGCTAATATGCTCCTCG 57.309 40.000 0.00 0.00 31.34 4.63
3945 4395 1.073763 ACTCCATGCTTACCAACTGCA 59.926 47.619 0.00 0.00 41.13 4.41
3966 4416 9.784680 TTGTTTTAACACGCAGAAATTTTAGTA 57.215 25.926 0.00 0.00 38.92 1.82
3985 4435 9.834628 GATTCGTGATCAAGGTTTATTGTTTTA 57.165 29.630 8.84 0.00 34.75 1.52
3986 4436 8.576442 AGATTCGTGATCAAGGTTTATTGTTTT 58.424 29.630 8.84 0.00 37.22 2.43
3993 4443 7.782049 ACAGATAGATTCGTGATCAAGGTTTA 58.218 34.615 8.84 0.00 37.22 2.01
3996 4446 5.860941 ACAGATAGATTCGTGATCAAGGT 57.139 39.130 8.84 0.00 37.22 3.50
4016 4466 6.538945 TGCTTACTAATGTCATCCACTACA 57.461 37.500 0.00 0.00 0.00 2.74
4017 4467 6.425114 CCATGCTTACTAATGTCATCCACTAC 59.575 42.308 0.00 0.00 0.00 2.73
4027 4477 7.366847 ACTCACTATCCATGCTTACTAATGT 57.633 36.000 0.00 0.00 0.00 2.71
4057 4507 1.486310 CCAGCCTATTGGTGCTCAGTA 59.514 52.381 0.00 0.00 41.21 2.74
4089 4539 4.852134 ATGTCAGACTAGCTAGCAGATG 57.148 45.455 20.91 13.47 0.00 2.90
4107 4557 6.374333 GGAATCCACACACACTTGTTATATGT 59.626 38.462 0.00 0.00 31.66 2.29
4108 4558 6.599244 AGGAATCCACACACACTTGTTATATG 59.401 38.462 0.61 0.00 31.66 1.78
4109 4559 6.599244 CAGGAATCCACACACACTTGTTATAT 59.401 38.462 0.61 0.00 31.66 0.86
4115 4565 2.575532 ACAGGAATCCACACACACTTG 58.424 47.619 0.61 0.00 0.00 3.16
4116 4566 2.951642 CAACAGGAATCCACACACACTT 59.048 45.455 0.61 0.00 0.00 3.16
4135 4588 4.318332 CAATGAGCTAACAGGACAGACAA 58.682 43.478 0.00 0.00 0.00 3.18
4179 4674 0.036388 TGCTCATCTTCCCCGTGTTC 60.036 55.000 0.00 0.00 0.00 3.18
4239 4734 0.247185 GCTTCTGCTCTCAGCTGTCT 59.753 55.000 14.67 0.00 42.97 3.41
4257 4752 2.202295 AACACACCGTCACAAAATGC 57.798 45.000 0.00 0.00 0.00 3.56
4260 4755 3.426426 GCTGTTAACACACCGTCACAAAA 60.426 43.478 3.59 0.00 0.00 2.44
4266 4761 0.584876 GTGGCTGTTAACACACCGTC 59.415 55.000 15.17 4.54 37.54 4.79
4268 4763 1.567537 CGTGGCTGTTAACACACCG 59.432 57.895 18.52 12.27 37.45 4.94
4269 4764 0.816421 ACCGTGGCTGTTAACACACC 60.816 55.000 18.52 16.23 37.45 4.16
4274 4769 1.515081 TAGCAACCGTGGCTGTTAAC 58.485 50.000 10.94 0.00 42.62 2.01
4275 4770 2.352388 GATAGCAACCGTGGCTGTTAA 58.648 47.619 10.94 0.00 42.62 2.01
4278 4773 1.078426 GGATAGCAACCGTGGCTGT 60.078 57.895 10.94 3.41 42.62 4.40
4280 4775 0.689745 TAGGGATAGCAACCGTGGCT 60.690 55.000 5.55 5.55 45.18 4.75
4283 4778 1.754803 TGACTAGGGATAGCAACCGTG 59.245 52.381 0.00 0.00 0.00 4.94
4290 4785 4.833380 TGGACAGTATTGACTAGGGATAGC 59.167 45.833 0.00 0.00 33.32 2.97
4293 4788 4.620723 TGTGGACAGTATTGACTAGGGAT 58.379 43.478 0.00 0.00 33.32 3.85
4295 4790 4.819105 TTGTGGACAGTATTGACTAGGG 57.181 45.455 0.00 0.00 33.32 3.53
4299 4794 5.013079 TCCTGATTTGTGGACAGTATTGACT 59.987 40.000 0.00 0.00 35.80 3.41
4306 4801 3.822735 CACAATCCTGATTTGTGGACAGT 59.177 43.478 8.33 0.00 34.90 3.55
4308 4803 3.820467 GACACAATCCTGATTTGTGGACA 59.180 43.478 17.77 0.00 35.80 4.02
4312 4807 3.425359 GCGAGACACAATCCTGATTTGTG 60.425 47.826 13.38 13.38 36.65 3.33
4318 4813 0.969149 ACAGCGAGACACAATCCTGA 59.031 50.000 0.00 0.00 0.00 3.86
4342 4837 3.366679 GCATAAAACTCATGCAGTGCTGT 60.367 43.478 17.60 7.20 46.47 4.40
4343 4838 3.176708 GCATAAAACTCATGCAGTGCTG 58.823 45.455 17.60 11.99 46.47 4.41
4344 4839 3.498927 GCATAAAACTCATGCAGTGCT 57.501 42.857 17.60 0.00 46.47 4.40
4502 5039 2.359354 CGATTGGCCCACCGAACA 60.359 61.111 0.00 0.00 39.70 3.18
4574 5111 3.487544 GGAAACAGGCAACGCAAGATATC 60.488 47.826 0.00 0.00 46.39 1.63
4575 5112 2.423538 GGAAACAGGCAACGCAAGATAT 59.576 45.455 0.00 0.00 46.39 1.63
4626 5200 1.002250 CACGGTCGCACAGTACTCAC 61.002 60.000 0.00 0.00 0.00 3.51
4627 5201 1.167781 TCACGGTCGCACAGTACTCA 61.168 55.000 0.00 0.00 0.00 3.41
4656 5230 4.078516 GACAACCCGACCCCTCCG 62.079 72.222 0.00 0.00 0.00 4.63
4657 5231 2.606826 AGACAACCCGACCCCTCC 60.607 66.667 0.00 0.00 0.00 4.30
4658 5232 2.979649 GAGACAACCCGACCCCTC 59.020 66.667 0.00 0.00 0.00 4.30
4659 5233 2.995574 CGAGACAACCCGACCCCT 60.996 66.667 0.00 0.00 0.00 4.79
4660 5234 4.754667 GCGAGACAACCCGACCCC 62.755 72.222 0.00 0.00 0.00 4.95
4661 5235 3.998672 TGCGAGACAACCCGACCC 61.999 66.667 0.00 0.00 0.00 4.46
4662 5236 2.737376 GTGCGAGACAACCCGACC 60.737 66.667 0.00 0.00 0.00 4.79
4663 5237 1.374252 ATGTGCGAGACAACCCGAC 60.374 57.895 0.00 0.00 38.36 4.79
4664 5238 1.374125 CATGTGCGAGACAACCCGA 60.374 57.895 0.00 0.00 38.36 5.14
4671 5245 1.709147 GCCATGTCCATGTGCGAGAC 61.709 60.000 6.53 0.00 37.11 3.36
4673 5247 1.434622 GAGCCATGTCCATGTGCGAG 61.435 60.000 6.53 0.00 38.85 5.03
4684 5258 3.230976 TCTCCATACATACGAGCCATGT 58.769 45.455 0.00 0.00 39.82 3.21
4685 5259 3.942130 TCTCCATACATACGAGCCATG 57.058 47.619 0.00 0.00 0.00 3.66
4686 5260 4.098654 GCTATCTCCATACATACGAGCCAT 59.901 45.833 0.00 0.00 0.00 4.40
4687 5261 3.444034 GCTATCTCCATACATACGAGCCA 59.556 47.826 0.00 0.00 0.00 4.75
4688 5262 3.444034 TGCTATCTCCATACATACGAGCC 59.556 47.826 0.00 0.00 0.00 4.70
4689 5263 4.439426 CCTGCTATCTCCATACATACGAGC 60.439 50.000 0.00 0.00 0.00 5.03
4690 5264 4.944317 TCCTGCTATCTCCATACATACGAG 59.056 45.833 0.00 0.00 0.00 4.18
4691 5265 4.918588 TCCTGCTATCTCCATACATACGA 58.081 43.478 0.00 0.00 0.00 3.43
4692 5266 4.702612 ACTCCTGCTATCTCCATACATACG 59.297 45.833 0.00 0.00 0.00 3.06
4693 5267 6.393990 CAACTCCTGCTATCTCCATACATAC 58.606 44.000 0.00 0.00 0.00 2.39
4694 5268 5.481824 CCAACTCCTGCTATCTCCATACATA 59.518 44.000 0.00 0.00 0.00 2.29
4695 5269 4.285517 CCAACTCCTGCTATCTCCATACAT 59.714 45.833 0.00 0.00 0.00 2.29
4696 5270 3.643320 CCAACTCCTGCTATCTCCATACA 59.357 47.826 0.00 0.00 0.00 2.29
4697 5271 3.556004 GCCAACTCCTGCTATCTCCATAC 60.556 52.174 0.00 0.00 0.00 2.39
4709 5283 3.964031 AGTCCTAGATAAGCCAACTCCTG 59.036 47.826 0.00 0.00 0.00 3.86
4769 5343 4.888239 AGTAGTACATGGCAACGATACTCT 59.112 41.667 2.52 0.00 42.51 3.24
4867 5444 0.534652 GGGCATGAGTGGAGATGCTC 60.535 60.000 0.00 0.00 43.77 4.26
4868 5445 0.987081 AGGGCATGAGTGGAGATGCT 60.987 55.000 0.00 0.00 43.77 3.79
4869 5446 0.534652 GAGGGCATGAGTGGAGATGC 60.535 60.000 0.00 0.00 43.60 3.91
4870 5447 0.835276 TGAGGGCATGAGTGGAGATG 59.165 55.000 0.00 0.00 0.00 2.90
4871 5448 1.588239 TTGAGGGCATGAGTGGAGAT 58.412 50.000 0.00 0.00 0.00 2.75
4872 5449 1.361204 TTTGAGGGCATGAGTGGAGA 58.639 50.000 0.00 0.00 0.00 3.71
4873 5450 2.089980 CTTTTGAGGGCATGAGTGGAG 58.910 52.381 0.00 0.00 0.00 3.86
4874 5451 1.887956 GCTTTTGAGGGCATGAGTGGA 60.888 52.381 0.00 0.00 0.00 4.02
4875 5452 0.529378 GCTTTTGAGGGCATGAGTGG 59.471 55.000 0.00 0.00 0.00 4.00
4876 5453 1.250328 TGCTTTTGAGGGCATGAGTG 58.750 50.000 0.00 0.00 33.23 3.51
4877 5454 2.226962 ATGCTTTTGAGGGCATGAGT 57.773 45.000 0.00 0.00 45.81 3.41
4882 5459 2.285024 GGGCATGCTTTTGAGGGCA 61.285 57.895 18.92 0.00 42.80 5.36
4883 5460 2.580815 GGGCATGCTTTTGAGGGC 59.419 61.111 18.92 0.00 0.00 5.19
4884 5461 2.361567 GGGGGCATGCTTTTGAGGG 61.362 63.158 18.92 0.00 0.00 4.30
4885 5462 1.193462 TTGGGGGCATGCTTTTGAGG 61.193 55.000 18.92 0.00 0.00 3.86
4886 5463 0.248289 CTTGGGGGCATGCTTTTGAG 59.752 55.000 18.92 7.06 0.00 3.02
4887 5464 0.178938 TCTTGGGGGCATGCTTTTGA 60.179 50.000 18.92 6.14 0.00 2.69
4888 5465 0.686224 TTCTTGGGGGCATGCTTTTG 59.314 50.000 18.92 3.81 0.00 2.44
4889 5466 0.978907 CTTCTTGGGGGCATGCTTTT 59.021 50.000 18.92 0.00 0.00 2.27
4890 5467 1.547472 GCTTCTTGGGGGCATGCTTT 61.547 55.000 18.92 0.00 0.00 3.51
4891 5468 1.986210 GCTTCTTGGGGGCATGCTT 60.986 57.895 18.92 0.00 0.00 3.91
4892 5469 2.363406 GCTTCTTGGGGGCATGCT 60.363 61.111 18.92 0.00 0.00 3.79
4893 5470 3.464494 GGCTTCTTGGGGGCATGC 61.464 66.667 9.90 9.90 0.00 4.06
4894 5471 2.761213 GGGCTTCTTGGGGGCATG 60.761 66.667 0.00 0.00 0.00 4.06
4895 5472 3.275271 TGGGCTTCTTGGGGGCAT 61.275 61.111 0.00 0.00 0.00 4.40
4896 5473 4.299796 GTGGGCTTCTTGGGGGCA 62.300 66.667 0.00 0.00 0.00 5.36
4898 5475 4.382541 GGGTGGGCTTCTTGGGGG 62.383 72.222 0.00 0.00 0.00 5.40
4899 5476 3.159104 TTGGGTGGGCTTCTTGGGG 62.159 63.158 0.00 0.00 0.00 4.96
4900 5477 1.607467 CTTGGGTGGGCTTCTTGGG 60.607 63.158 0.00 0.00 0.00 4.12
4901 5478 2.278330 GCTTGGGTGGGCTTCTTGG 61.278 63.158 0.00 0.00 0.00 3.61
4902 5479 2.278330 GGCTTGGGTGGGCTTCTTG 61.278 63.158 0.00 0.00 0.00 3.02
4903 5480 2.118294 GGCTTGGGTGGGCTTCTT 59.882 61.111 0.00 0.00 0.00 2.52
4904 5481 3.185203 TGGCTTGGGTGGGCTTCT 61.185 61.111 0.00 0.00 0.00 2.85
4905 5482 2.991540 GTGGCTTGGGTGGGCTTC 60.992 66.667 0.00 0.00 0.00 3.86
4906 5483 2.603933 AAAGTGGCTTGGGTGGGCTT 62.604 55.000 0.00 0.00 0.00 4.35
4907 5484 2.603933 AAAAGTGGCTTGGGTGGGCT 62.604 55.000 0.00 0.00 0.00 5.19
4908 5485 1.695114 AAAAAGTGGCTTGGGTGGGC 61.695 55.000 0.00 0.00 0.00 5.36
4909 5486 0.106521 CAAAAAGTGGCTTGGGTGGG 59.893 55.000 0.00 0.00 0.00 4.61
4910 5487 0.106521 CCAAAAAGTGGCTTGGGTGG 59.893 55.000 0.00 0.00 41.72 4.61
4911 5488 3.684693 CCAAAAAGTGGCTTGGGTG 57.315 52.632 0.00 0.00 41.72 4.61
4920 5497 1.444212 CGCCGGCATCCAAAAAGTG 60.444 57.895 28.98 0.37 0.00 3.16
4921 5498 2.635443 CCGCCGGCATCCAAAAAGT 61.635 57.895 28.98 0.00 0.00 2.66
4922 5499 2.181525 CCGCCGGCATCCAAAAAG 59.818 61.111 28.98 6.19 0.00 2.27
4923 5500 3.377759 CCCGCCGGCATCCAAAAA 61.378 61.111 28.98 0.00 0.00 1.94
4941 5518 2.094026 GGCTCCAATAGGGCACTTTTTG 60.094 50.000 0.00 0.00 36.21 2.44
4942 5519 2.179427 GGCTCCAATAGGGCACTTTTT 58.821 47.619 0.00 0.00 36.21 1.94
4943 5520 1.619704 GGGCTCCAATAGGGCACTTTT 60.620 52.381 0.00 0.00 33.33 2.27
4944 5521 0.033109 GGGCTCCAATAGGGCACTTT 60.033 55.000 0.00 0.00 33.33 2.66
4945 5522 1.615262 GGGCTCCAATAGGGCACTT 59.385 57.895 0.00 0.00 33.33 3.16
4946 5523 2.386935 GGGGCTCCAATAGGGCACT 61.387 63.158 0.00 0.00 35.55 4.40
4947 5524 2.195956 GGGGCTCCAATAGGGCAC 59.804 66.667 0.00 0.00 34.77 5.01
4948 5525 2.286808 TGGGGCTCCAATAGGGCA 60.287 61.111 0.25 0.00 40.73 5.36
4949 5526 1.645402 TTCTGGGGCTCCAATAGGGC 61.645 60.000 6.84 0.00 43.51 5.19
4950 5527 0.926293 TTTCTGGGGCTCCAATAGGG 59.074 55.000 6.84 0.00 43.51 3.53
4951 5528 1.410224 GGTTTCTGGGGCTCCAATAGG 60.410 57.143 6.84 0.00 43.51 2.57
4952 5529 1.566231 AGGTTTCTGGGGCTCCAATAG 59.434 52.381 6.84 0.00 43.51 1.73
4953 5530 1.284785 CAGGTTTCTGGGGCTCCAATA 59.715 52.381 6.84 0.00 43.51 1.90
4954 5531 0.040204 CAGGTTTCTGGGGCTCCAAT 59.960 55.000 6.84 0.00 43.51 3.16
4955 5532 1.360393 ACAGGTTTCTGGGGCTCCAA 61.360 55.000 6.84 0.00 44.99 3.53
4956 5533 1.360393 AACAGGTTTCTGGGGCTCCA 61.360 55.000 4.49 4.49 44.99 3.86
4957 5534 0.178961 AAACAGGTTTCTGGGGCTCC 60.179 55.000 0.00 0.00 44.99 4.70
4958 5535 1.704641 AAAACAGGTTTCTGGGGCTC 58.295 50.000 0.00 0.00 44.99 4.70
4959 5536 2.594131 GTAAAACAGGTTTCTGGGGCT 58.406 47.619 0.00 0.00 44.99 5.19
4960 5537 1.268625 CGTAAAACAGGTTTCTGGGGC 59.731 52.381 0.00 0.00 44.99 5.80
4961 5538 1.268625 GCGTAAAACAGGTTTCTGGGG 59.731 52.381 0.00 0.00 44.99 4.96
4962 5539 1.268625 GGCGTAAAACAGGTTTCTGGG 59.731 52.381 0.00 0.00 44.99 4.45
4963 5540 1.069500 CGGCGTAAAACAGGTTTCTGG 60.069 52.381 0.00 0.00 44.99 3.86
4964 5541 1.069500 CCGGCGTAAAACAGGTTTCTG 60.069 52.381 6.01 0.00 46.10 3.02
4965 5542 1.202675 TCCGGCGTAAAACAGGTTTCT 60.203 47.619 6.01 0.00 31.45 2.52
4966 5543 1.228533 TCCGGCGTAAAACAGGTTTC 58.771 50.000 6.01 0.00 31.45 2.78
4967 5544 1.900245 ATCCGGCGTAAAACAGGTTT 58.100 45.000 6.01 0.00 0.00 3.27
4968 5545 1.900245 AATCCGGCGTAAAACAGGTT 58.100 45.000 6.01 0.00 0.00 3.50
4969 5546 1.538075 CAAATCCGGCGTAAAACAGGT 59.462 47.619 6.01 0.00 0.00 4.00
4970 5547 1.135517 CCAAATCCGGCGTAAAACAGG 60.136 52.381 6.01 0.00 0.00 4.00
4971 5548 1.731098 GCCAAATCCGGCGTAAAACAG 60.731 52.381 6.01 0.00 43.52 3.16
4972 5549 0.241481 GCCAAATCCGGCGTAAAACA 59.759 50.000 6.01 0.00 43.52 2.83
4973 5550 3.024423 GCCAAATCCGGCGTAAAAC 57.976 52.632 6.01 0.00 43.52 2.43
4981 5558 1.131693 GGTAACTTTCGCCAAATCCGG 59.868 52.381 0.00 0.00 0.00 5.14
4982 5559 1.201987 CGGTAACTTTCGCCAAATCCG 60.202 52.381 0.00 0.00 0.00 4.18
4983 5560 1.466866 GCGGTAACTTTCGCCAAATCC 60.467 52.381 0.00 0.00 45.42 3.01
4984 5561 1.891178 GCGGTAACTTTCGCCAAATC 58.109 50.000 0.00 0.00 45.42 2.17
4991 5568 2.739287 TGCCGGCGGTAACTTTCG 60.739 61.111 28.82 0.00 0.00 3.46
4992 5569 1.962306 TGTGCCGGCGGTAACTTTC 60.962 57.895 28.82 11.31 0.00 2.62
4993 5570 2.111460 TGTGCCGGCGGTAACTTT 59.889 55.556 28.82 0.00 0.00 2.66
4994 5571 2.667199 GTGTGCCGGCGGTAACTT 60.667 61.111 28.82 0.00 0.00 2.66
4995 5572 4.692475 GGTGTGCCGGCGGTAACT 62.692 66.667 28.82 0.00 0.00 2.24
5004 5581 4.904590 TTTGGGGTGGGTGTGCCG 62.905 66.667 0.00 0.00 34.97 5.69
5005 5582 3.230990 GTTTGGGGTGGGTGTGCC 61.231 66.667 0.00 0.00 0.00 5.01
5006 5583 3.230990 GGTTTGGGGTGGGTGTGC 61.231 66.667 0.00 0.00 0.00 4.57
5007 5584 2.523168 GGGTTTGGGGTGGGTGTG 60.523 66.667 0.00 0.00 0.00 3.82
5008 5585 3.030611 TGGGTTTGGGGTGGGTGT 61.031 61.111 0.00 0.00 0.00 4.16
5009 5586 2.203625 CTGGGTTTGGGGTGGGTG 60.204 66.667 0.00 0.00 0.00 4.61
5010 5587 4.233558 GCTGGGTTTGGGGTGGGT 62.234 66.667 0.00 0.00 0.00 4.51
5046 5623 4.778143 AATGTCGGCGTCCCCAGC 62.778 66.667 6.85 0.00 0.00 4.85
5047 5624 2.046314 AAATGTCGGCGTCCCCAG 60.046 61.111 6.85 0.00 0.00 4.45
5048 5625 2.046700 GAAATGTCGGCGTCCCCA 60.047 61.111 6.85 0.00 0.00 4.96
5049 5626 0.958876 AAAGAAATGTCGGCGTCCCC 60.959 55.000 6.85 0.00 0.00 4.81
5050 5627 0.879090 AAAAGAAATGTCGGCGTCCC 59.121 50.000 6.85 0.00 0.00 4.46
5051 5628 2.699251 AAAAAGAAATGTCGGCGTCC 57.301 45.000 6.85 0.00 0.00 4.79
5068 5645 1.350071 ATGGGCCTGTGCATGAAAAA 58.650 45.000 4.53 0.00 40.13 1.94
5069 5646 1.350071 AATGGGCCTGTGCATGAAAA 58.650 45.000 4.53 0.00 40.13 2.29
5070 5647 1.002201 CAAATGGGCCTGTGCATGAAA 59.998 47.619 4.53 0.00 40.13 2.69
5071 5648 0.609151 CAAATGGGCCTGTGCATGAA 59.391 50.000 4.53 0.00 40.13 2.57
5072 5649 1.890625 GCAAATGGGCCTGTGCATGA 61.891 55.000 17.92 0.00 40.13 3.07
5073 5650 1.448893 GCAAATGGGCCTGTGCATG 60.449 57.895 17.92 5.23 40.13 4.06
5074 5651 2.983791 GCAAATGGGCCTGTGCAT 59.016 55.556 17.92 0.00 40.13 3.96
5083 5660 2.761213 GAGGGGCTGGCAAATGGG 60.761 66.667 2.88 0.00 0.00 4.00
5084 5661 1.755783 GAGAGGGGCTGGCAAATGG 60.756 63.158 2.88 0.00 0.00 3.16
5085 5662 0.750911 GAGAGAGGGGCTGGCAAATG 60.751 60.000 2.88 0.00 0.00 2.32
5086 5663 0.918310 AGAGAGAGGGGCTGGCAAAT 60.918 55.000 2.88 0.00 0.00 2.32
5087 5664 1.539869 AGAGAGAGGGGCTGGCAAA 60.540 57.895 2.88 0.00 0.00 3.68
5088 5665 1.992277 GAGAGAGAGGGGCTGGCAA 60.992 63.158 2.88 0.00 0.00 4.52
5089 5666 2.364842 GAGAGAGAGGGGCTGGCA 60.365 66.667 2.88 0.00 0.00 4.92
5090 5667 3.160748 GGAGAGAGAGGGGCTGGC 61.161 72.222 0.00 0.00 0.00 4.85
5091 5668 1.457455 GAGGAGAGAGAGGGGCTGG 60.457 68.421 0.00 0.00 0.00 4.85
5092 5669 0.468029 GAGAGGAGAGAGAGGGGCTG 60.468 65.000 0.00 0.00 0.00 4.85
5093 5670 1.655114 GGAGAGGAGAGAGAGGGGCT 61.655 65.000 0.00 0.00 0.00 5.19
5094 5671 1.152546 GGAGAGGAGAGAGAGGGGC 60.153 68.421 0.00 0.00 0.00 5.80
5095 5672 0.933700 AAGGAGAGGAGAGAGAGGGG 59.066 60.000 0.00 0.00 0.00 4.79
5096 5673 2.244769 AGAAAGGAGAGGAGAGAGAGGG 59.755 54.545 0.00 0.00 0.00 4.30
5097 5674 3.203040 AGAGAAAGGAGAGGAGAGAGAGG 59.797 52.174 0.00 0.00 0.00 3.69
5098 5675 4.164988 AGAGAGAAAGGAGAGGAGAGAGAG 59.835 50.000 0.00 0.00 0.00 3.20
5099 5676 4.111577 AGAGAGAAAGGAGAGGAGAGAGA 58.888 47.826 0.00 0.00 0.00 3.10
5100 5677 4.510167 AGAGAGAAAGGAGAGGAGAGAG 57.490 50.000 0.00 0.00 0.00 3.20
5101 5678 4.946160 AAGAGAGAAAGGAGAGGAGAGA 57.054 45.455 0.00 0.00 0.00 3.10
5102 5679 5.716703 AGAAAAGAGAGAAAGGAGAGGAGAG 59.283 44.000 0.00 0.00 0.00 3.20
5103 5680 5.650283 AGAAAAGAGAGAAAGGAGAGGAGA 58.350 41.667 0.00 0.00 0.00 3.71
5104 5681 6.358974 AAGAAAAGAGAGAAAGGAGAGGAG 57.641 41.667 0.00 0.00 0.00 3.69
5105 5682 6.556874 AGAAAGAAAAGAGAGAAAGGAGAGGA 59.443 38.462 0.00 0.00 0.00 3.71
5106 5683 6.768483 AGAAAGAAAAGAGAGAAAGGAGAGG 58.232 40.000 0.00 0.00 0.00 3.69
5107 5684 6.873605 GGAGAAAGAAAAGAGAGAAAGGAGAG 59.126 42.308 0.00 0.00 0.00 3.20
5108 5685 6.556874 AGGAGAAAGAAAAGAGAGAAAGGAGA 59.443 38.462 0.00 0.00 0.00 3.71
5109 5686 6.768483 AGGAGAAAGAAAAGAGAGAAAGGAG 58.232 40.000 0.00 0.00 0.00 3.69
5110 5687 6.556874 AGAGGAGAAAGAAAAGAGAGAAAGGA 59.443 38.462 0.00 0.00 0.00 3.36
5111 5688 6.768483 AGAGGAGAAAGAAAAGAGAGAAAGG 58.232 40.000 0.00 0.00 0.00 3.11
5112 5689 7.670364 AGAGAGGAGAAAGAAAAGAGAGAAAG 58.330 38.462 0.00 0.00 0.00 2.62
5113 5690 7.256154 GGAGAGAGGAGAAAGAAAAGAGAGAAA 60.256 40.741 0.00 0.00 0.00 2.52
5114 5691 6.210584 GGAGAGAGGAGAAAGAAAAGAGAGAA 59.789 42.308 0.00 0.00 0.00 2.87
5115 5692 5.714806 GGAGAGAGGAGAAAGAAAAGAGAGA 59.285 44.000 0.00 0.00 0.00 3.10
5116 5693 5.716703 AGGAGAGAGGAGAAAGAAAAGAGAG 59.283 44.000 0.00 0.00 0.00 3.20
5117 5694 5.650283 AGGAGAGAGGAGAAAGAAAAGAGA 58.350 41.667 0.00 0.00 0.00 3.10
5118 5695 5.716703 AGAGGAGAGAGGAGAAAGAAAAGAG 59.283 44.000 0.00 0.00 0.00 2.85
5119 5696 5.650283 AGAGGAGAGAGGAGAAAGAAAAGA 58.350 41.667 0.00 0.00 0.00 2.52
5120 5697 5.105351 GGAGAGGAGAGAGGAGAAAGAAAAG 60.105 48.000 0.00 0.00 0.00 2.27
5121 5698 4.775253 GGAGAGGAGAGAGGAGAAAGAAAA 59.225 45.833 0.00 0.00 0.00 2.29
5122 5699 4.045334 AGGAGAGGAGAGAGGAGAAAGAAA 59.955 45.833 0.00 0.00 0.00 2.52
5123 5700 3.596046 AGGAGAGGAGAGAGGAGAAAGAA 59.404 47.826 0.00 0.00 0.00 2.52
5124 5701 3.197983 AGGAGAGGAGAGAGGAGAAAGA 58.802 50.000 0.00 0.00 0.00 2.52
5125 5702 3.669939 AGGAGAGGAGAGAGGAGAAAG 57.330 52.381 0.00 0.00 0.00 2.62
5126 5703 4.412060 AAAGGAGAGGAGAGAGGAGAAA 57.588 45.455 0.00 0.00 0.00 2.52
5127 5704 4.349365 GAAAAGGAGAGGAGAGAGGAGAA 58.651 47.826 0.00 0.00 0.00 2.87
5128 5705 3.309556 GGAAAAGGAGAGGAGAGAGGAGA 60.310 52.174 0.00 0.00 0.00 3.71
5129 5706 3.031013 GGAAAAGGAGAGGAGAGAGGAG 58.969 54.545 0.00 0.00 0.00 3.69
5130 5707 2.657459 AGGAAAAGGAGAGGAGAGAGGA 59.343 50.000 0.00 0.00 0.00 3.71
5131 5708 3.114643 AGGAAAAGGAGAGGAGAGAGG 57.885 52.381 0.00 0.00 0.00 3.69
5132 5709 3.450817 GGAAGGAAAAGGAGAGGAGAGAG 59.549 52.174 0.00 0.00 0.00 3.20
5133 5710 3.181406 TGGAAGGAAAAGGAGAGGAGAGA 60.181 47.826 0.00 0.00 0.00 3.10
5134 5711 3.055458 GTGGAAGGAAAAGGAGAGGAGAG 60.055 52.174 0.00 0.00 0.00 3.20
5135 5712 2.907042 GTGGAAGGAAAAGGAGAGGAGA 59.093 50.000 0.00 0.00 0.00 3.71
5136 5713 2.026729 GGTGGAAGGAAAAGGAGAGGAG 60.027 54.545 0.00 0.00 0.00 3.69
5137 5714 1.985895 GGTGGAAGGAAAAGGAGAGGA 59.014 52.381 0.00 0.00 0.00 3.71
5138 5715 1.705186 TGGTGGAAGGAAAAGGAGAGG 59.295 52.381 0.00 0.00 0.00 3.69
5139 5716 2.553247 GGTGGTGGAAGGAAAAGGAGAG 60.553 54.545 0.00 0.00 0.00 3.20
5140 5717 1.423921 GGTGGTGGAAGGAAAAGGAGA 59.576 52.381 0.00 0.00 0.00 3.71
5141 5718 1.425448 AGGTGGTGGAAGGAAAAGGAG 59.575 52.381 0.00 0.00 0.00 3.69
5142 5719 1.529744 AGGTGGTGGAAGGAAAAGGA 58.470 50.000 0.00 0.00 0.00 3.36
5143 5720 2.554564 GGTAGGTGGTGGAAGGAAAAGG 60.555 54.545 0.00 0.00 0.00 3.11
5144 5721 2.107552 TGGTAGGTGGTGGAAGGAAAAG 59.892 50.000 0.00 0.00 0.00 2.27
5145 5722 2.136863 TGGTAGGTGGTGGAAGGAAAA 58.863 47.619 0.00 0.00 0.00 2.29
5146 5723 1.422402 GTGGTAGGTGGTGGAAGGAAA 59.578 52.381 0.00 0.00 0.00 3.13
5147 5724 1.061546 GTGGTAGGTGGTGGAAGGAA 58.938 55.000 0.00 0.00 0.00 3.36
5148 5725 0.104882 TGTGGTAGGTGGTGGAAGGA 60.105 55.000 0.00 0.00 0.00 3.36
5149 5726 0.036306 GTGTGGTAGGTGGTGGAAGG 59.964 60.000 0.00 0.00 0.00 3.46
5150 5727 0.762418 TGTGTGGTAGGTGGTGGAAG 59.238 55.000 0.00 0.00 0.00 3.46
5151 5728 0.470766 GTGTGTGGTAGGTGGTGGAA 59.529 55.000 0.00 0.00 0.00 3.53
5152 5729 0.691413 TGTGTGTGGTAGGTGGTGGA 60.691 55.000 0.00 0.00 0.00 4.02
5153 5730 0.250295 CTGTGTGTGGTAGGTGGTGG 60.250 60.000 0.00 0.00 0.00 4.61
5154 5731 0.884704 GCTGTGTGTGGTAGGTGGTG 60.885 60.000 0.00 0.00 0.00 4.17
5155 5732 1.450211 GCTGTGTGTGGTAGGTGGT 59.550 57.895 0.00 0.00 0.00 4.16
5156 5733 1.302511 GGCTGTGTGTGGTAGGTGG 60.303 63.158 0.00 0.00 0.00 4.61
5157 5734 1.667830 CGGCTGTGTGTGGTAGGTG 60.668 63.158 0.00 0.00 0.00 4.00
5158 5735 2.741092 CGGCTGTGTGTGGTAGGT 59.259 61.111 0.00 0.00 0.00 3.08
5159 5736 2.047274 CCGGCTGTGTGTGGTAGG 60.047 66.667 0.00 0.00 0.00 3.18
5160 5737 1.079819 CTCCGGCTGTGTGTGGTAG 60.080 63.158 0.00 0.00 0.00 3.18
5161 5738 3.056458 CTCCGGCTGTGTGTGGTA 58.944 61.111 0.00 0.00 0.00 3.25
5162 5739 4.626081 GCTCCGGCTGTGTGTGGT 62.626 66.667 0.00 0.00 35.22 4.16
5188 5765 3.813724 GTCCCCTCCCCAGCCATG 61.814 72.222 0.00 0.00 0.00 3.66


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.