Multiple sequence alignment - TraesCS4D01G219600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G219600 chr4D 100.000 3405 0 0 1 3405 375068731 375072135 0.000000e+00 6288
1 TraesCS4D01G219600 chr4D 95.459 1035 32 4 1750 2784 498717570 498716551 0.000000e+00 1637
2 TraesCS4D01G219600 chr4D 93.902 164 10 0 464 627 235796765 235796928 7.300000e-62 248
3 TraesCS4D01G219600 chr1D 96.620 1657 31 3 1750 3405 414450174 414448542 0.000000e+00 2726
4 TraesCS4D01G219600 chr1D 94.626 1656 47 9 1750 3405 444899391 444901004 0.000000e+00 2527
5 TraesCS4D01G219600 chr1D 96.978 1125 31 3 626 1749 414451243 414450121 0.000000e+00 1886
6 TraesCS4D01G219600 chr1D 88.018 1135 105 20 628 1749 335412171 335413287 0.000000e+00 1314
7 TraesCS4D01G219600 chr7D 96.618 1656 29 3 1750 3405 92233468 92231840 0.000000e+00 2723
8 TraesCS4D01G219600 chr7D 96.437 1656 27 4 1750 3405 631817514 631815891 0.000000e+00 2702
9 TraesCS4D01G219600 chr7D 96.400 1139 24 4 627 1749 92234552 92233415 0.000000e+00 1860
10 TraesCS4D01G219600 chr7D 95.698 1139 23 7 627 1749 631818589 631817461 0.000000e+00 1808
11 TraesCS4D01G219600 chr3D 96.558 1656 30 6 1750 3405 45062156 45060528 0.000000e+00 2717
12 TraesCS4D01G219600 chr3D 97.600 1125 24 3 626 1749 45063225 45062103 0.000000e+00 1925
13 TraesCS4D01G219600 chr3D 94.504 928 40 6 628 1554 19766671 19765754 0.000000e+00 1421
14 TraesCS4D01G219600 chr3D 88.215 1154 93 18 628 1749 575254523 575253381 0.000000e+00 1338
15 TraesCS4D01G219600 chr5D 96.316 1656 30 3 1750 3405 408554260 408552636 0.000000e+00 2691
16 TraesCS4D01G219600 chr5D 96.839 1139 19 9 627 1749 408555344 408554207 0.000000e+00 1888
17 TraesCS4D01G219600 chr5D 83.677 1164 128 35 631 1749 459925475 459924329 0.000000e+00 1040
18 TraesCS4D01G219600 chr5D 95.122 164 8 0 464 627 12608228 12608065 3.370000e-65 259
19 TraesCS4D01G219600 chr2D 94.928 1656 45 16 1750 3405 624288195 624289811 0.000000e+00 2556
20 TraesCS4D01G219600 chr2D 94.384 1656 51 5 1750 3405 547545057 547543444 0.000000e+00 2505
21 TraesCS4D01G219600 chr2D 94.199 1655 54 8 1750 3404 489933855 489932243 0.000000e+00 2486
22 TraesCS4D01G219600 chr2D 87.230 1527 115 39 1750 3264 601105624 601104166 0.000000e+00 1666
23 TraesCS4D01G219600 chr2D 94.959 972 40 4 625 1594 624287165 624288129 0.000000e+00 1515
24 TraesCS4D01G219600 chr2D 94.611 167 9 0 461 627 315124213 315124379 3.370000e-65 259
25 TraesCS4D01G219600 chr2D 93.902 164 10 0 464 627 474177296 474177459 7.300000e-62 248
26 TraesCS4D01G219600 chr2D 91.061 179 14 2 450 627 197394131 197394308 1.220000e-59 241
27 TraesCS4D01G219600 chr7A 94.676 1653 63 7 1753 3405 15601084 15599457 0.000000e+00 2542
28 TraesCS4D01G219600 chr7A 86.842 1140 115 23 629 1749 563240953 563239830 0.000000e+00 1242
29 TraesCS4D01G219600 chr1A 93.164 1653 64 17 1750 3400 302912927 302914532 0.000000e+00 2381
30 TraesCS4D01G219600 chr4A 94.671 1520 52 7 1750 3268 521946274 521947765 0.000000e+00 2331
31 TraesCS4D01G219600 chr4A 91.495 388 23 4 1 383 89451466 89451084 3.010000e-145 525
32 TraesCS4D01G219600 chr3A 91.908 1656 60 21 1750 3400 27907621 27906035 0.000000e+00 2248
33 TraesCS4D01G219600 chr7B 85.338 1555 182 31 1750 3277 488249081 488247546 0.000000e+00 1567
34 TraesCS4D01G219600 chr7B 94.512 164 9 0 464 627 96926704 96926867 1.570000e-63 254
35 TraesCS4D01G219600 chr7B 93.902 164 10 0 464 627 393854882 393855045 7.300000e-62 248
36 TraesCS4D01G219600 chr5B 83.914 1492 168 48 1750 3228 358646622 358645190 0.000000e+00 1360
37 TraesCS4D01G219600 chr5A 90.972 864 64 10 895 1749 574041070 574040212 0.000000e+00 1151
38 TraesCS4D01G219600 chr1B 84.573 901 99 27 628 1512 572992371 572991495 0.000000e+00 857
39 TraesCS4D01G219600 chr4B 94.057 387 19 3 1 383 462205562 462205948 4.900000e-163 584
40 TraesCS4D01G219600 chr4B 94.512 164 9 0 464 627 330786923 330786760 1.570000e-63 254
41 TraesCS4D01G219600 chr3B 93.902 164 10 0 464 627 309058579 309058742 7.300000e-62 248


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G219600 chr4D 375068731 375072135 3404 False 6288.0 6288 100.0000 1 3405 1 chr4D.!!$F2 3404
1 TraesCS4D01G219600 chr4D 498716551 498717570 1019 True 1637.0 1637 95.4590 1750 2784 1 chr4D.!!$R1 1034
2 TraesCS4D01G219600 chr1D 444899391 444901004 1613 False 2527.0 2527 94.6260 1750 3405 1 chr1D.!!$F2 1655
3 TraesCS4D01G219600 chr1D 414448542 414451243 2701 True 2306.0 2726 96.7990 626 3405 2 chr1D.!!$R1 2779
4 TraesCS4D01G219600 chr1D 335412171 335413287 1116 False 1314.0 1314 88.0180 628 1749 1 chr1D.!!$F1 1121
5 TraesCS4D01G219600 chr7D 92231840 92234552 2712 True 2291.5 2723 96.5090 627 3405 2 chr7D.!!$R1 2778
6 TraesCS4D01G219600 chr7D 631815891 631818589 2698 True 2255.0 2702 96.0675 627 3405 2 chr7D.!!$R2 2778
7 TraesCS4D01G219600 chr3D 45060528 45063225 2697 True 2321.0 2717 97.0790 626 3405 2 chr3D.!!$R3 2779
8 TraesCS4D01G219600 chr3D 19765754 19766671 917 True 1421.0 1421 94.5040 628 1554 1 chr3D.!!$R1 926
9 TraesCS4D01G219600 chr3D 575253381 575254523 1142 True 1338.0 1338 88.2150 628 1749 1 chr3D.!!$R2 1121
10 TraesCS4D01G219600 chr5D 408552636 408555344 2708 True 2289.5 2691 96.5775 627 3405 2 chr5D.!!$R3 2778
11 TraesCS4D01G219600 chr5D 459924329 459925475 1146 True 1040.0 1040 83.6770 631 1749 1 chr5D.!!$R2 1118
12 TraesCS4D01G219600 chr2D 547543444 547545057 1613 True 2505.0 2505 94.3840 1750 3405 1 chr2D.!!$R2 1655
13 TraesCS4D01G219600 chr2D 489932243 489933855 1612 True 2486.0 2486 94.1990 1750 3404 1 chr2D.!!$R1 1654
14 TraesCS4D01G219600 chr2D 624287165 624289811 2646 False 2035.5 2556 94.9435 625 3405 2 chr2D.!!$F4 2780
15 TraesCS4D01G219600 chr2D 601104166 601105624 1458 True 1666.0 1666 87.2300 1750 3264 1 chr2D.!!$R3 1514
16 TraesCS4D01G219600 chr7A 15599457 15601084 1627 True 2542.0 2542 94.6760 1753 3405 1 chr7A.!!$R1 1652
17 TraesCS4D01G219600 chr7A 563239830 563240953 1123 True 1242.0 1242 86.8420 629 1749 1 chr7A.!!$R2 1120
18 TraesCS4D01G219600 chr1A 302912927 302914532 1605 False 2381.0 2381 93.1640 1750 3400 1 chr1A.!!$F1 1650
19 TraesCS4D01G219600 chr4A 521946274 521947765 1491 False 2331.0 2331 94.6710 1750 3268 1 chr4A.!!$F1 1518
20 TraesCS4D01G219600 chr3A 27906035 27907621 1586 True 2248.0 2248 91.9080 1750 3400 1 chr3A.!!$R1 1650
21 TraesCS4D01G219600 chr7B 488247546 488249081 1535 True 1567.0 1567 85.3380 1750 3277 1 chr7B.!!$R1 1527
22 TraesCS4D01G219600 chr5B 358645190 358646622 1432 True 1360.0 1360 83.9140 1750 3228 1 chr5B.!!$R1 1478
23 TraesCS4D01G219600 chr5A 574040212 574041070 858 True 1151.0 1151 90.9720 895 1749 1 chr5A.!!$R1 854
24 TraesCS4D01G219600 chr1B 572991495 572992371 876 True 857.0 857 84.5730 628 1512 1 chr1B.!!$R1 884

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
135 136 0.025513 CGATAGCTTTCAGTGCGCAC 59.974 55.0 32.79 32.79 35.28 5.34 F
343 344 0.165944 GAAACACAACATCGGAGCCG 59.834 55.0 1.74 1.74 41.35 5.52 F
1020 1081 0.181587 TGCCTTCCTGGAACAACGAA 59.818 50.0 4.68 0.00 38.70 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1020 1081 1.316706 CCTCCTCCGAGCTCGTTTCT 61.317 60.000 32.41 0.0 37.74 2.52 R
2339 2508 2.224992 TGCCATACCCTTCTTTCAGCAA 60.225 45.455 0.00 0.0 0.00 3.91 R
2950 3227 0.614415 CTCCTCCTCCTCTGTGCTGT 60.614 60.000 0.00 0.0 0.00 4.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 1.487231 CGTCGTCGCTTTTGACAGG 59.513 57.895 0.00 0.00 38.84 4.00
19 20 0.937699 CGTCGTCGCTTTTGACAGGA 60.938 55.000 0.00 0.00 38.84 3.86
20 21 1.429463 GTCGTCGCTTTTGACAGGAT 58.571 50.000 0.00 0.00 38.84 3.24
21 22 1.126846 GTCGTCGCTTTTGACAGGATG 59.873 52.381 0.00 0.00 46.00 3.51
22 23 0.179215 CGTCGCTTTTGACAGGATGC 60.179 55.000 0.00 0.00 42.53 3.91
23 24 0.874390 GTCGCTTTTGACAGGATGCA 59.126 50.000 0.00 0.00 42.53 3.96
24 25 1.470098 GTCGCTTTTGACAGGATGCAT 59.530 47.619 0.00 0.00 42.53 3.96
25 26 1.469703 TCGCTTTTGACAGGATGCATG 59.530 47.619 2.46 0.00 42.53 4.06
26 27 1.636988 GCTTTTGACAGGATGCATGC 58.363 50.000 11.82 11.82 42.53 4.06
27 28 1.738030 GCTTTTGACAGGATGCATGCC 60.738 52.381 16.68 10.55 42.53 4.40
28 29 1.822990 CTTTTGACAGGATGCATGCCT 59.177 47.619 16.68 12.68 42.53 4.75
29 30 1.466856 TTTGACAGGATGCATGCCTC 58.533 50.000 16.68 15.19 42.53 4.70
30 31 0.745486 TTGACAGGATGCATGCCTCG 60.745 55.000 16.68 6.46 42.53 4.63
31 32 1.144716 GACAGGATGCATGCCTCGA 59.855 57.895 16.68 0.00 42.53 4.04
32 33 0.879400 GACAGGATGCATGCCTCGAG 60.879 60.000 16.68 12.74 42.53 4.04
33 34 1.145598 CAGGATGCATGCCTCGAGT 59.854 57.895 16.68 0.21 32.12 4.18
34 35 0.463295 CAGGATGCATGCCTCGAGTT 60.463 55.000 16.68 0.00 32.12 3.01
35 36 0.254178 AGGATGCATGCCTCGAGTTT 59.746 50.000 16.68 0.00 0.00 2.66
36 37 0.379669 GGATGCATGCCTCGAGTTTG 59.620 55.000 16.68 6.89 0.00 2.93
37 38 0.379669 GATGCATGCCTCGAGTTTGG 59.620 55.000 16.68 0.00 0.00 3.28
38 39 0.035152 ATGCATGCCTCGAGTTTGGA 60.035 50.000 16.68 7.38 0.00 3.53
39 40 0.955428 TGCATGCCTCGAGTTTGGAC 60.955 55.000 16.68 0.00 0.00 4.02
40 41 0.674895 GCATGCCTCGAGTTTGGACT 60.675 55.000 12.31 0.00 39.32 3.85
41 42 1.405526 GCATGCCTCGAGTTTGGACTA 60.406 52.381 12.31 0.00 35.88 2.59
42 43 2.544685 CATGCCTCGAGTTTGGACTAG 58.455 52.381 12.31 0.00 35.88 2.57
43 44 1.919240 TGCCTCGAGTTTGGACTAGA 58.081 50.000 12.31 0.00 35.88 2.43
48 49 4.086199 CTCGAGTTTGGACTAGAGTGAC 57.914 50.000 3.62 0.00 45.28 3.67
49 50 3.483421 TCGAGTTTGGACTAGAGTGACA 58.517 45.455 0.00 0.00 35.88 3.58
50 51 3.887110 TCGAGTTTGGACTAGAGTGACAA 59.113 43.478 0.00 0.00 35.88 3.18
51 52 3.982058 CGAGTTTGGACTAGAGTGACAAC 59.018 47.826 0.00 0.00 35.88 3.32
52 53 3.978687 AGTTTGGACTAGAGTGACAACG 58.021 45.455 0.00 0.00 33.32 4.10
53 54 3.635373 AGTTTGGACTAGAGTGACAACGA 59.365 43.478 0.00 0.00 33.32 3.85
54 55 3.637998 TTGGACTAGAGTGACAACGAC 57.362 47.619 0.00 0.00 0.00 4.34
55 56 2.578786 TGGACTAGAGTGACAACGACA 58.421 47.619 0.00 0.00 0.00 4.35
56 57 2.953648 TGGACTAGAGTGACAACGACAA 59.046 45.455 0.00 0.00 0.00 3.18
57 58 3.572682 TGGACTAGAGTGACAACGACAAT 59.427 43.478 0.00 0.00 0.00 2.71
58 59 3.921021 GGACTAGAGTGACAACGACAATG 59.079 47.826 0.00 0.00 0.00 2.82
59 60 3.318017 ACTAGAGTGACAACGACAATGC 58.682 45.455 0.00 0.00 0.00 3.56
60 61 1.512926 AGAGTGACAACGACAATGCC 58.487 50.000 0.00 0.00 0.00 4.40
61 62 1.070758 AGAGTGACAACGACAATGCCT 59.929 47.619 0.00 0.00 0.00 4.75
62 63 1.461127 GAGTGACAACGACAATGCCTC 59.539 52.381 0.00 0.00 0.00 4.70
63 64 0.163788 GTGACAACGACAATGCCTCG 59.836 55.000 0.00 0.00 37.17 4.63
64 65 0.032815 TGACAACGACAATGCCTCGA 59.967 50.000 0.25 0.00 35.08 4.04
65 66 0.716108 GACAACGACAATGCCTCGAG 59.284 55.000 5.13 5.13 35.08 4.04
66 67 1.291877 ACAACGACAATGCCTCGAGC 61.292 55.000 6.99 3.23 44.14 5.03
81 82 6.793492 GCCTCGAGCATTTTCTAATCTTAT 57.207 37.500 6.99 0.00 42.97 1.73
82 83 6.597614 GCCTCGAGCATTTTCTAATCTTATG 58.402 40.000 6.99 0.00 42.97 1.90
83 84 6.348050 GCCTCGAGCATTTTCTAATCTTATGG 60.348 42.308 6.99 0.00 42.97 2.74
84 85 6.931281 CCTCGAGCATTTTCTAATCTTATGGA 59.069 38.462 6.99 0.00 0.00 3.41
85 86 7.605691 CCTCGAGCATTTTCTAATCTTATGGAT 59.394 37.037 6.99 0.00 35.97 3.41
86 87 8.539770 TCGAGCATTTTCTAATCTTATGGATC 57.460 34.615 0.00 0.00 32.76 3.36
87 88 7.329471 TCGAGCATTTTCTAATCTTATGGATCG 59.671 37.037 0.00 0.00 32.76 3.69
88 89 7.412346 CGAGCATTTTCTAATCTTATGGATCGG 60.412 40.741 0.00 0.00 32.76 4.18
89 90 7.453393 AGCATTTTCTAATCTTATGGATCGGA 58.547 34.615 0.00 0.00 32.76 4.55
90 91 8.105829 AGCATTTTCTAATCTTATGGATCGGAT 58.894 33.333 0.00 0.00 32.76 4.18
91 92 8.180267 GCATTTTCTAATCTTATGGATCGGATG 58.820 37.037 0.00 0.00 32.76 3.51
92 93 9.440773 CATTTTCTAATCTTATGGATCGGATGA 57.559 33.333 0.00 0.00 32.76 2.92
96 97 8.470657 TCTAATCTTATGGATCGGATGATAGG 57.529 38.462 0.00 0.00 34.09 2.57
97 98 5.543507 ATCTTATGGATCGGATGATAGGC 57.456 43.478 0.00 0.00 34.09 3.93
98 99 3.706594 TCTTATGGATCGGATGATAGGCC 59.293 47.826 0.00 0.00 34.09 5.19
100 101 1.153549 GGATCGGATGATAGGCCGC 60.154 63.158 0.00 0.00 46.79 6.53
101 102 1.608717 GGATCGGATGATAGGCCGCT 61.609 60.000 0.00 0.00 46.79 5.52
102 103 0.459237 GATCGGATGATAGGCCGCTG 60.459 60.000 0.00 0.00 46.79 5.18
103 104 0.900182 ATCGGATGATAGGCCGCTGA 60.900 55.000 0.00 0.00 46.79 4.26
104 105 1.112916 TCGGATGATAGGCCGCTGAA 61.113 55.000 0.00 0.00 46.79 3.02
105 106 0.668706 CGGATGATAGGCCGCTGAAG 60.669 60.000 0.00 0.00 41.17 3.02
106 107 0.952984 GGATGATAGGCCGCTGAAGC 60.953 60.000 0.00 0.00 37.78 3.86
112 113 4.760047 GGCCGCTGAAGCCGAAGA 62.760 66.667 0.00 0.00 41.41 2.87
113 114 2.512515 GCCGCTGAAGCCGAAGAT 60.513 61.111 0.00 0.00 37.91 2.40
114 115 2.817423 GCCGCTGAAGCCGAAGATG 61.817 63.158 0.00 0.00 37.91 2.90
115 116 1.153568 CCGCTGAAGCCGAAGATGA 60.154 57.895 0.00 0.00 37.91 2.92
116 117 1.424493 CCGCTGAAGCCGAAGATGAC 61.424 60.000 0.00 0.00 37.91 3.06
117 118 1.746727 CGCTGAAGCCGAAGATGACG 61.747 60.000 0.00 0.00 37.91 4.35
118 119 0.458543 GCTGAAGCCGAAGATGACGA 60.459 55.000 0.00 0.00 34.31 4.20
119 120 1.804372 GCTGAAGCCGAAGATGACGAT 60.804 52.381 0.00 0.00 34.31 3.73
120 121 2.543861 GCTGAAGCCGAAGATGACGATA 60.544 50.000 0.00 0.00 34.31 2.92
121 122 3.304257 CTGAAGCCGAAGATGACGATAG 58.696 50.000 0.00 0.00 46.19 2.08
122 123 2.055100 GAAGCCGAAGATGACGATAGC 58.945 52.381 0.00 0.00 42.67 2.97
123 124 1.323412 AGCCGAAGATGACGATAGCT 58.677 50.000 0.00 0.00 42.67 3.32
124 125 1.683917 AGCCGAAGATGACGATAGCTT 59.316 47.619 0.00 0.00 42.67 3.74
125 126 2.101582 AGCCGAAGATGACGATAGCTTT 59.898 45.455 0.00 0.00 42.67 3.51
126 127 2.473235 GCCGAAGATGACGATAGCTTTC 59.527 50.000 0.00 0.00 42.67 2.62
127 128 3.706698 CCGAAGATGACGATAGCTTTCA 58.293 45.455 5.00 0.00 42.67 2.69
128 129 3.733224 CCGAAGATGACGATAGCTTTCAG 59.267 47.826 5.00 0.55 42.67 3.02
129 130 4.355437 CGAAGATGACGATAGCTTTCAGT 58.645 43.478 5.00 3.59 42.67 3.41
130 131 4.205996 CGAAGATGACGATAGCTTTCAGTG 59.794 45.833 5.00 0.00 42.67 3.66
131 132 3.452474 AGATGACGATAGCTTTCAGTGC 58.548 45.455 5.00 0.00 42.67 4.40
132 133 1.629013 TGACGATAGCTTTCAGTGCG 58.371 50.000 5.00 0.00 42.67 5.34
133 134 0.299003 GACGATAGCTTTCAGTGCGC 59.701 55.000 0.00 0.00 42.67 6.09
134 135 0.389817 ACGATAGCTTTCAGTGCGCA 60.390 50.000 5.66 5.66 42.67 6.09
135 136 0.025513 CGATAGCTTTCAGTGCGCAC 59.974 55.000 32.79 32.79 35.28 5.34
136 137 0.025513 GATAGCTTTCAGTGCGCACG 59.974 55.000 32.94 26.38 36.20 5.34
137 138 0.389817 ATAGCTTTCAGTGCGCACGA 60.390 50.000 32.94 28.05 36.20 4.35
138 139 1.008875 TAGCTTTCAGTGCGCACGAG 61.009 55.000 32.94 28.09 36.20 4.18
139 140 2.856032 CTTTCAGTGCGCACGAGG 59.144 61.111 32.94 25.45 36.20 4.63
140 141 1.664649 CTTTCAGTGCGCACGAGGA 60.665 57.895 32.94 27.14 36.20 3.71
141 142 1.621301 CTTTCAGTGCGCACGAGGAG 61.621 60.000 32.94 25.26 36.20 3.69
142 143 2.082629 TTTCAGTGCGCACGAGGAGA 62.083 55.000 32.94 22.98 36.20 3.71
143 144 2.749110 TTCAGTGCGCACGAGGAGAC 62.749 60.000 32.94 8.66 36.20 3.36
144 145 3.295273 AGTGCGCACGAGGAGACA 61.295 61.111 32.94 0.00 36.20 3.41
145 146 2.355837 GTGCGCACGAGGAGACAA 60.356 61.111 26.77 0.00 0.00 3.18
146 147 1.954146 GTGCGCACGAGGAGACAAA 60.954 57.895 26.77 0.00 0.00 2.83
147 148 1.664649 TGCGCACGAGGAGACAAAG 60.665 57.895 5.66 0.00 0.00 2.77
148 149 1.664965 GCGCACGAGGAGACAAAGT 60.665 57.895 0.30 0.00 0.00 2.66
149 150 1.618640 GCGCACGAGGAGACAAAGTC 61.619 60.000 0.30 0.00 0.00 3.01
150 151 0.318699 CGCACGAGGAGACAAAGTCA 60.319 55.000 0.00 0.00 34.60 3.41
151 152 1.670087 CGCACGAGGAGACAAAGTCAT 60.670 52.381 0.00 0.00 34.60 3.06
152 153 1.996191 GCACGAGGAGACAAAGTCATC 59.004 52.381 0.00 0.00 34.60 2.92
153 154 2.611518 CACGAGGAGACAAAGTCATCC 58.388 52.381 0.00 4.22 34.60 3.51
154 155 1.550976 ACGAGGAGACAAAGTCATCCC 59.449 52.381 0.00 0.00 33.51 3.85
155 156 1.827969 CGAGGAGACAAAGTCATCCCT 59.172 52.381 0.00 3.22 33.51 4.20
156 157 2.159170 CGAGGAGACAAAGTCATCCCTC 60.159 54.545 16.36 16.36 39.78 4.30
157 158 3.103742 GAGGAGACAAAGTCATCCCTCT 58.896 50.000 17.85 2.86 39.90 3.69
158 159 2.836981 AGGAGACAAAGTCATCCCTCTG 59.163 50.000 0.00 0.00 33.51 3.35
159 160 2.626840 GAGACAAAGTCATCCCTCTGC 58.373 52.381 0.00 0.00 34.60 4.26
160 161 1.980765 AGACAAAGTCATCCCTCTGCA 59.019 47.619 0.00 0.00 34.60 4.41
161 162 2.575279 AGACAAAGTCATCCCTCTGCAT 59.425 45.455 0.00 0.00 34.60 3.96
162 163 2.941720 GACAAAGTCATCCCTCTGCATC 59.058 50.000 0.00 0.00 32.09 3.91
163 164 2.575279 ACAAAGTCATCCCTCTGCATCT 59.425 45.455 0.00 0.00 0.00 2.90
164 165 2.943690 CAAAGTCATCCCTCTGCATCTG 59.056 50.000 0.00 0.00 0.00 2.90
165 166 1.129917 AGTCATCCCTCTGCATCTGG 58.870 55.000 0.00 0.00 0.00 3.86
166 167 0.534652 GTCATCCCTCTGCATCTGGC 60.535 60.000 0.00 0.00 45.13 4.85
167 168 1.228184 CATCCCTCTGCATCTGGCC 60.228 63.158 0.00 0.00 43.89 5.36
168 169 2.459086 ATCCCTCTGCATCTGGCCC 61.459 63.158 0.00 0.00 43.89 5.80
169 170 3.414193 CCCTCTGCATCTGGCCCA 61.414 66.667 0.00 0.00 43.89 5.36
170 171 2.679092 CCTCTGCATCTGGCCCAA 59.321 61.111 0.00 0.00 43.89 4.12
171 172 1.000521 CCTCTGCATCTGGCCCAAA 60.001 57.895 0.00 0.00 43.89 3.28
172 173 0.612732 CCTCTGCATCTGGCCCAAAA 60.613 55.000 0.00 0.00 43.89 2.44
173 174 1.481871 CTCTGCATCTGGCCCAAAAT 58.518 50.000 0.00 0.00 43.89 1.82
174 175 1.136305 CTCTGCATCTGGCCCAAAATG 59.864 52.381 0.00 0.00 43.89 2.32
175 176 0.899720 CTGCATCTGGCCCAAAATGT 59.100 50.000 0.00 0.00 43.89 2.71
176 177 2.101783 CTGCATCTGGCCCAAAATGTA 58.898 47.619 0.00 2.93 43.89 2.29
177 178 2.496871 CTGCATCTGGCCCAAAATGTAA 59.503 45.455 0.00 0.00 43.89 2.41
178 179 2.233431 TGCATCTGGCCCAAAATGTAAC 59.767 45.455 0.00 0.00 43.89 2.50
179 180 2.497273 GCATCTGGCCCAAAATGTAACT 59.503 45.455 0.00 0.00 36.11 2.24
180 181 3.676873 GCATCTGGCCCAAAATGTAACTG 60.677 47.826 0.00 0.00 36.11 3.16
181 182 1.892474 TCTGGCCCAAAATGTAACTGC 59.108 47.619 0.00 0.00 0.00 4.40
182 183 1.895131 CTGGCCCAAAATGTAACTGCT 59.105 47.619 0.00 0.00 0.00 4.24
183 184 1.617850 TGGCCCAAAATGTAACTGCTG 59.382 47.619 0.00 0.00 0.00 4.41
184 185 1.618343 GGCCCAAAATGTAACTGCTGT 59.382 47.619 0.00 0.00 0.00 4.40
185 186 2.610232 GGCCCAAAATGTAACTGCTGTG 60.610 50.000 0.00 0.00 0.00 3.66
186 187 2.035832 GCCCAAAATGTAACTGCTGTGT 59.964 45.455 0.00 0.00 0.00 3.72
187 188 3.641648 CCCAAAATGTAACTGCTGTGTG 58.358 45.455 0.00 0.00 0.00 3.82
188 189 3.068024 CCCAAAATGTAACTGCTGTGTGT 59.932 43.478 0.00 0.00 0.00 3.72
189 190 4.277174 CCCAAAATGTAACTGCTGTGTGTA 59.723 41.667 0.00 0.00 0.00 2.90
190 191 5.451908 CCAAAATGTAACTGCTGTGTGTAG 58.548 41.667 0.00 0.00 0.00 2.74
191 192 5.451908 CAAAATGTAACTGCTGTGTGTAGG 58.548 41.667 0.00 0.00 32.41 3.18
192 193 4.351874 AATGTAACTGCTGTGTGTAGGT 57.648 40.909 0.00 0.00 32.41 3.08
193 194 3.830744 TGTAACTGCTGTGTGTAGGTT 57.169 42.857 0.00 0.00 32.41 3.50
194 195 3.724374 TGTAACTGCTGTGTGTAGGTTC 58.276 45.455 0.00 0.00 32.41 3.62
195 196 3.133183 TGTAACTGCTGTGTGTAGGTTCA 59.867 43.478 0.00 0.00 32.41 3.18
196 197 3.275617 AACTGCTGTGTGTAGGTTCAA 57.724 42.857 0.00 0.00 32.41 2.69
197 198 3.275617 ACTGCTGTGTGTAGGTTCAAA 57.724 42.857 0.00 0.00 32.41 2.69
198 199 3.616219 ACTGCTGTGTGTAGGTTCAAAA 58.384 40.909 0.00 0.00 32.41 2.44
199 200 4.207165 ACTGCTGTGTGTAGGTTCAAAAT 58.793 39.130 0.00 0.00 32.41 1.82
200 201 4.644685 ACTGCTGTGTGTAGGTTCAAAATT 59.355 37.500 0.00 0.00 32.41 1.82
201 202 5.825679 ACTGCTGTGTGTAGGTTCAAAATTA 59.174 36.000 0.00 0.00 32.41 1.40
202 203 6.017109 ACTGCTGTGTGTAGGTTCAAAATTAG 60.017 38.462 0.00 0.00 32.41 1.73
203 204 5.825679 TGCTGTGTGTAGGTTCAAAATTAGT 59.174 36.000 0.00 0.00 0.00 2.24
204 205 6.993308 TGCTGTGTGTAGGTTCAAAATTAGTA 59.007 34.615 0.00 0.00 0.00 1.82
205 206 7.663905 TGCTGTGTGTAGGTTCAAAATTAGTAT 59.336 33.333 0.00 0.00 0.00 2.12
206 207 8.175716 GCTGTGTGTAGGTTCAAAATTAGTATC 58.824 37.037 0.00 0.00 0.00 2.24
207 208 8.246908 TGTGTGTAGGTTCAAAATTAGTATCG 57.753 34.615 0.00 0.00 0.00 2.92
208 209 7.332430 TGTGTGTAGGTTCAAAATTAGTATCGG 59.668 37.037 0.00 0.00 0.00 4.18
209 210 7.546667 GTGTGTAGGTTCAAAATTAGTATCGGA 59.453 37.037 0.00 0.00 0.00 4.55
210 211 7.762615 TGTGTAGGTTCAAAATTAGTATCGGAG 59.237 37.037 0.00 0.00 0.00 4.63
211 212 7.224167 GTGTAGGTTCAAAATTAGTATCGGAGG 59.776 40.741 0.00 0.00 0.00 4.30
212 213 6.555463 AGGTTCAAAATTAGTATCGGAGGA 57.445 37.500 0.00 0.00 0.00 3.71
213 214 7.138054 AGGTTCAAAATTAGTATCGGAGGAT 57.862 36.000 0.00 0.00 36.65 3.24
214 215 6.992715 AGGTTCAAAATTAGTATCGGAGGATG 59.007 38.462 0.00 0.00 34.00 3.51
215 216 6.204882 GGTTCAAAATTAGTATCGGAGGATGG 59.795 42.308 0.00 0.00 34.00 3.51
216 217 6.494666 TCAAAATTAGTATCGGAGGATGGT 57.505 37.500 0.00 0.00 34.00 3.55
217 218 6.522054 TCAAAATTAGTATCGGAGGATGGTC 58.478 40.000 0.00 0.00 34.00 4.02
218 219 6.099125 TCAAAATTAGTATCGGAGGATGGTCA 59.901 38.462 0.00 0.00 34.00 4.02
219 220 6.688073 AAATTAGTATCGGAGGATGGTCAT 57.312 37.500 0.00 0.00 34.00 3.06
220 221 5.667539 ATTAGTATCGGAGGATGGTCATG 57.332 43.478 0.00 0.00 34.00 3.07
221 222 3.244887 AGTATCGGAGGATGGTCATGA 57.755 47.619 0.00 0.00 34.00 3.07
222 223 3.576861 AGTATCGGAGGATGGTCATGAA 58.423 45.455 0.00 0.00 34.00 2.57
223 224 3.576118 AGTATCGGAGGATGGTCATGAAG 59.424 47.826 0.00 0.00 34.00 3.02
224 225 2.159179 TCGGAGGATGGTCATGAAGA 57.841 50.000 0.00 0.00 0.00 2.87
225 226 2.466846 TCGGAGGATGGTCATGAAGAA 58.533 47.619 0.00 0.00 0.00 2.52
226 227 2.168521 TCGGAGGATGGTCATGAAGAAC 59.831 50.000 0.00 0.00 0.00 3.01
227 228 2.169352 CGGAGGATGGTCATGAAGAACT 59.831 50.000 0.00 0.00 34.06 3.01
228 229 3.384789 CGGAGGATGGTCATGAAGAACTA 59.615 47.826 0.00 0.00 34.06 2.24
229 230 4.039730 CGGAGGATGGTCATGAAGAACTAT 59.960 45.833 0.00 0.00 34.06 2.12
230 231 5.303971 GGAGGATGGTCATGAAGAACTATG 58.696 45.833 0.00 0.00 34.06 2.23
231 232 5.301835 AGGATGGTCATGAAGAACTATGG 57.698 43.478 0.00 0.00 34.06 2.74
232 233 3.817647 GGATGGTCATGAAGAACTATGGC 59.182 47.826 0.00 0.00 34.06 4.40
233 234 4.445448 GGATGGTCATGAAGAACTATGGCT 60.445 45.833 0.00 0.00 34.06 4.75
234 235 4.142609 TGGTCATGAAGAACTATGGCTC 57.857 45.455 0.00 0.00 34.06 4.70
235 236 3.519107 TGGTCATGAAGAACTATGGCTCA 59.481 43.478 0.00 0.00 34.06 4.26
236 237 3.873952 GGTCATGAAGAACTATGGCTCAC 59.126 47.826 0.00 0.00 0.00 3.51
237 238 4.383552 GGTCATGAAGAACTATGGCTCACT 60.384 45.833 0.00 0.00 0.00 3.41
238 239 5.163405 GGTCATGAAGAACTATGGCTCACTA 60.163 44.000 0.00 0.00 0.00 2.74
239 240 6.463614 GGTCATGAAGAACTATGGCTCACTAT 60.464 42.308 0.00 0.00 0.00 2.12
240 241 7.255977 GGTCATGAAGAACTATGGCTCACTATA 60.256 40.741 0.00 0.00 0.00 1.31
241 242 7.596995 GTCATGAAGAACTATGGCTCACTATAC 59.403 40.741 0.00 0.00 0.00 1.47
242 243 7.287696 TCATGAAGAACTATGGCTCACTATACA 59.712 37.037 0.00 0.00 0.00 2.29
243 244 7.418337 TGAAGAACTATGGCTCACTATACAA 57.582 36.000 0.00 0.00 0.00 2.41
244 245 7.492524 TGAAGAACTATGGCTCACTATACAAG 58.507 38.462 0.00 0.00 0.00 3.16
245 246 7.342026 TGAAGAACTATGGCTCACTATACAAGA 59.658 37.037 0.00 0.00 0.00 3.02
246 247 7.283625 AGAACTATGGCTCACTATACAAGAG 57.716 40.000 0.00 0.00 0.00 2.85
247 248 7.063593 AGAACTATGGCTCACTATACAAGAGA 58.936 38.462 0.00 0.00 0.00 3.10
248 249 7.561722 AGAACTATGGCTCACTATACAAGAGAA 59.438 37.037 0.00 0.00 0.00 2.87
249 250 7.283625 ACTATGGCTCACTATACAAGAGAAG 57.716 40.000 0.00 0.00 0.00 2.85
250 251 5.543507 ATGGCTCACTATACAAGAGAAGG 57.456 43.478 0.00 0.00 0.00 3.46
251 252 3.706594 TGGCTCACTATACAAGAGAAGGG 59.293 47.826 0.00 0.00 0.00 3.95
252 253 3.961408 GGCTCACTATACAAGAGAAGGGA 59.039 47.826 0.00 0.00 0.00 4.20
253 254 4.406003 GGCTCACTATACAAGAGAAGGGAA 59.594 45.833 0.00 0.00 0.00 3.97
254 255 5.452636 GGCTCACTATACAAGAGAAGGGAAG 60.453 48.000 0.00 0.00 0.00 3.46
255 256 5.361285 GCTCACTATACAAGAGAAGGGAAGA 59.639 44.000 0.00 0.00 0.00 2.87
256 257 6.681865 GCTCACTATACAAGAGAAGGGAAGAC 60.682 46.154 0.00 0.00 0.00 3.01
257 258 6.253758 TCACTATACAAGAGAAGGGAAGACA 58.746 40.000 0.00 0.00 0.00 3.41
258 259 6.897966 TCACTATACAAGAGAAGGGAAGACAT 59.102 38.462 0.00 0.00 0.00 3.06
259 260 7.068839 TCACTATACAAGAGAAGGGAAGACATC 59.931 40.741 0.00 0.00 0.00 3.06
260 261 7.069331 CACTATACAAGAGAAGGGAAGACATCT 59.931 40.741 0.00 0.00 0.00 2.90
261 262 4.550076 ACAAGAGAAGGGAAGACATCTG 57.450 45.455 0.00 0.00 0.00 2.90
262 263 3.906846 ACAAGAGAAGGGAAGACATCTGT 59.093 43.478 0.00 0.00 0.00 3.41
263 264 5.087323 ACAAGAGAAGGGAAGACATCTGTA 58.913 41.667 0.00 0.00 0.00 2.74
264 265 5.723887 ACAAGAGAAGGGAAGACATCTGTAT 59.276 40.000 0.00 0.00 0.00 2.29
265 266 6.214412 ACAAGAGAAGGGAAGACATCTGTATT 59.786 38.462 0.00 0.00 31.40 1.89
266 267 6.882768 AGAGAAGGGAAGACATCTGTATTT 57.117 37.500 0.00 0.00 28.51 1.40
267 268 7.264294 AGAGAAGGGAAGACATCTGTATTTT 57.736 36.000 0.00 0.00 28.51 1.82
268 269 8.380742 AGAGAAGGGAAGACATCTGTATTTTA 57.619 34.615 0.00 0.00 28.51 1.52
269 270 8.261522 AGAGAAGGGAAGACATCTGTATTTTAC 58.738 37.037 0.00 0.00 28.51 2.01
270 271 8.152023 AGAAGGGAAGACATCTGTATTTTACT 57.848 34.615 0.00 0.00 28.51 2.24
271 272 8.261522 AGAAGGGAAGACATCTGTATTTTACTC 58.738 37.037 0.00 0.00 28.51 2.59
272 273 7.741554 AGGGAAGACATCTGTATTTTACTCT 57.258 36.000 0.00 0.00 28.51 3.24
273 274 8.152023 AGGGAAGACATCTGTATTTTACTCTT 57.848 34.615 0.00 0.00 28.51 2.85
274 275 8.606830 AGGGAAGACATCTGTATTTTACTCTTT 58.393 33.333 0.00 0.00 28.51 2.52
275 276 9.886132 GGGAAGACATCTGTATTTTACTCTTTA 57.114 33.333 0.00 0.00 28.51 1.85
291 292 8.828688 TTACTCTTTAAAACTAGACCAGAAGC 57.171 34.615 0.00 0.00 0.00 3.86
292 293 7.068686 ACTCTTTAAAACTAGACCAGAAGCT 57.931 36.000 0.00 0.00 0.00 3.74
293 294 7.156000 ACTCTTTAAAACTAGACCAGAAGCTC 58.844 38.462 0.00 0.00 0.00 4.09
294 295 6.465084 TCTTTAAAACTAGACCAGAAGCTCC 58.535 40.000 0.00 0.00 0.00 4.70
295 296 6.270231 TCTTTAAAACTAGACCAGAAGCTCCT 59.730 38.462 0.00 0.00 0.00 3.69
296 297 4.984146 AAAACTAGACCAGAAGCTCCTT 57.016 40.909 0.00 0.00 0.00 3.36
297 298 4.545208 AAACTAGACCAGAAGCTCCTTC 57.455 45.455 0.00 0.00 40.45 3.46
298 299 2.096248 ACTAGACCAGAAGCTCCTTCG 58.904 52.381 0.00 0.00 44.34 3.79
299 300 1.407258 CTAGACCAGAAGCTCCTTCGG 59.593 57.143 11.52 11.52 44.34 4.30
300 301 0.543174 AGACCAGAAGCTCCTTCGGT 60.543 55.000 15.90 15.90 44.34 4.69
301 302 0.321996 GACCAGAAGCTCCTTCGGTT 59.678 55.000 16.57 0.51 44.34 4.44
302 303 0.765510 ACCAGAAGCTCCTTCGGTTT 59.234 50.000 12.43 0.00 44.34 3.27
303 304 1.143073 ACCAGAAGCTCCTTCGGTTTT 59.857 47.619 12.43 0.00 44.34 2.43
304 305 2.370849 ACCAGAAGCTCCTTCGGTTTTA 59.629 45.455 12.43 0.00 44.34 1.52
305 306 3.009143 ACCAGAAGCTCCTTCGGTTTTAT 59.991 43.478 12.43 0.00 44.34 1.40
306 307 4.010349 CCAGAAGCTCCTTCGGTTTTATT 58.990 43.478 0.00 0.00 44.34 1.40
307 308 5.183228 CCAGAAGCTCCTTCGGTTTTATTA 58.817 41.667 0.00 0.00 44.34 0.98
308 309 5.646360 CCAGAAGCTCCTTCGGTTTTATTAA 59.354 40.000 0.00 0.00 44.34 1.40
309 310 6.318900 CCAGAAGCTCCTTCGGTTTTATTAAT 59.681 38.462 0.00 0.00 44.34 1.40
310 311 7.148069 CCAGAAGCTCCTTCGGTTTTATTAATT 60.148 37.037 0.00 0.00 44.34 1.40
311 312 8.889717 CAGAAGCTCCTTCGGTTTTATTAATTA 58.110 33.333 0.00 0.00 44.34 1.40
312 313 9.457436 AGAAGCTCCTTCGGTTTTATTAATTAA 57.543 29.630 0.00 0.00 44.34 1.40
313 314 9.717892 GAAGCTCCTTCGGTTTTATTAATTAAG 57.282 33.333 3.94 0.00 30.62 1.85
314 315 9.457436 AAGCTCCTTCGGTTTTATTAATTAAGA 57.543 29.630 3.94 0.00 0.00 2.10
315 316 9.110502 AGCTCCTTCGGTTTTATTAATTAAGAG 57.889 33.333 3.94 2.02 0.00 2.85
316 317 8.343366 GCTCCTTCGGTTTTATTAATTAAGAGG 58.657 37.037 3.94 0.00 0.00 3.69
317 318 9.609346 CTCCTTCGGTTTTATTAATTAAGAGGA 57.391 33.333 3.94 0.00 0.00 3.71
318 319 9.609346 TCCTTCGGTTTTATTAATTAAGAGGAG 57.391 33.333 3.94 0.00 0.00 3.69
319 320 9.609346 CCTTCGGTTTTATTAATTAAGAGGAGA 57.391 33.333 3.94 0.00 0.00 3.71
341 342 1.601903 TGTGAAACACAACATCGGAGC 59.398 47.619 1.99 0.00 45.67 4.70
342 343 1.069227 GTGAAACACAACATCGGAGCC 60.069 52.381 0.00 0.00 36.32 4.70
343 344 0.165944 GAAACACAACATCGGAGCCG 59.834 55.000 1.74 1.74 41.35 5.52
344 345 1.234615 AAACACAACATCGGAGCCGG 61.235 55.000 9.29 0.00 40.25 6.13
345 346 2.107041 AACACAACATCGGAGCCGGA 62.107 55.000 5.05 0.00 40.25 5.14
346 347 1.375396 CACAACATCGGAGCCGGAA 60.375 57.895 5.05 0.00 40.25 4.30
347 348 1.375523 ACAACATCGGAGCCGGAAC 60.376 57.895 5.05 0.00 40.25 3.62
348 349 1.079127 CAACATCGGAGCCGGAACT 60.079 57.895 5.05 0.00 40.25 3.01
349 350 0.673644 CAACATCGGAGCCGGAACTT 60.674 55.000 5.05 0.00 40.25 2.66
350 351 0.673644 AACATCGGAGCCGGAACTTG 60.674 55.000 5.05 0.00 40.25 3.16
351 352 1.218047 CATCGGAGCCGGAACTTGA 59.782 57.895 5.05 0.00 40.25 3.02
352 353 0.391130 CATCGGAGCCGGAACTTGAA 60.391 55.000 5.05 0.00 40.25 2.69
353 354 0.391263 ATCGGAGCCGGAACTTGAAC 60.391 55.000 5.05 0.00 40.25 3.18
354 355 1.301401 CGGAGCCGGAACTTGAACA 60.301 57.895 5.05 0.00 35.56 3.18
355 356 1.566018 CGGAGCCGGAACTTGAACAC 61.566 60.000 5.05 0.00 35.56 3.32
356 357 1.566018 GGAGCCGGAACTTGAACACG 61.566 60.000 5.05 0.00 0.00 4.49
357 358 2.171489 GAGCCGGAACTTGAACACGC 62.171 60.000 5.05 0.00 0.00 5.34
358 359 2.539338 GCCGGAACTTGAACACGCA 61.539 57.895 5.05 0.00 0.00 5.24
359 360 1.852067 GCCGGAACTTGAACACGCAT 61.852 55.000 5.05 0.00 0.00 4.73
360 361 1.434555 CCGGAACTTGAACACGCATA 58.565 50.000 0.00 0.00 0.00 3.14
361 362 1.393539 CCGGAACTTGAACACGCATAG 59.606 52.381 0.00 0.00 0.00 2.23
362 363 1.393539 CGGAACTTGAACACGCATAGG 59.606 52.381 0.00 0.00 0.00 2.57
363 364 1.130561 GGAACTTGAACACGCATAGGC 59.869 52.381 0.00 0.00 0.00 3.93
364 365 2.076863 GAACTTGAACACGCATAGGCT 58.923 47.619 0.00 0.00 38.10 4.58
365 366 3.259064 GAACTTGAACACGCATAGGCTA 58.741 45.455 0.00 0.00 38.10 3.93
366 367 2.893637 ACTTGAACACGCATAGGCTAG 58.106 47.619 0.00 0.00 38.10 3.42
367 368 2.205074 CTTGAACACGCATAGGCTAGG 58.795 52.381 0.96 0.96 38.10 3.02
368 369 1.480789 TGAACACGCATAGGCTAGGA 58.519 50.000 10.88 0.00 38.10 2.94
369 370 1.409064 TGAACACGCATAGGCTAGGAG 59.591 52.381 10.88 9.55 38.10 3.69
370 371 1.681793 GAACACGCATAGGCTAGGAGA 59.318 52.381 16.61 0.00 38.10 3.71
371 372 1.033574 ACACGCATAGGCTAGGAGAC 58.966 55.000 16.61 0.00 38.10 3.36
372 373 1.032794 CACGCATAGGCTAGGAGACA 58.967 55.000 16.61 0.00 38.10 3.41
373 374 1.033574 ACGCATAGGCTAGGAGACAC 58.966 55.000 16.61 0.00 38.10 3.67
374 375 1.032794 CGCATAGGCTAGGAGACACA 58.967 55.000 10.88 0.00 38.10 3.72
375 376 1.409064 CGCATAGGCTAGGAGACACAA 59.591 52.381 10.88 0.00 38.10 3.33
376 377 2.799917 CGCATAGGCTAGGAGACACAAC 60.800 54.545 10.88 0.00 38.10 3.32
377 378 2.432510 GCATAGGCTAGGAGACACAACT 59.567 50.000 10.88 0.00 36.96 3.16
378 379 3.739519 GCATAGGCTAGGAGACACAACTG 60.740 52.174 10.88 0.00 36.96 3.16
379 380 2.016905 AGGCTAGGAGACACAACTGT 57.983 50.000 0.00 0.00 0.00 3.55
380 381 3.170991 AGGCTAGGAGACACAACTGTA 57.829 47.619 0.00 0.00 0.00 2.74
381 382 3.714144 AGGCTAGGAGACACAACTGTAT 58.286 45.455 0.00 0.00 0.00 2.29
382 383 4.097418 AGGCTAGGAGACACAACTGTATT 58.903 43.478 0.00 0.00 0.00 1.89
383 384 5.269991 AGGCTAGGAGACACAACTGTATTA 58.730 41.667 0.00 0.00 0.00 0.98
384 385 5.127356 AGGCTAGGAGACACAACTGTATTAC 59.873 44.000 0.00 0.00 0.00 1.89
385 386 5.349809 GCTAGGAGACACAACTGTATTACC 58.650 45.833 0.00 0.00 0.00 2.85
386 387 4.820894 AGGAGACACAACTGTATTACCC 57.179 45.455 0.00 0.00 0.00 3.69
387 388 3.518303 AGGAGACACAACTGTATTACCCC 59.482 47.826 0.00 0.00 0.00 4.95
388 389 3.370209 GGAGACACAACTGTATTACCCCC 60.370 52.174 0.00 0.00 0.00 5.40
389 390 2.235402 AGACACAACTGTATTACCCCCG 59.765 50.000 0.00 0.00 0.00 5.73
390 391 1.339342 ACACAACTGTATTACCCCCGC 60.339 52.381 0.00 0.00 0.00 6.13
391 392 0.985760 ACAACTGTATTACCCCCGCA 59.014 50.000 0.00 0.00 0.00 5.69
392 393 1.351683 ACAACTGTATTACCCCCGCAA 59.648 47.619 0.00 0.00 0.00 4.85
393 394 2.224818 ACAACTGTATTACCCCCGCAAA 60.225 45.455 0.00 0.00 0.00 3.68
394 395 2.820787 CAACTGTATTACCCCCGCAAAA 59.179 45.455 0.00 0.00 0.00 2.44
395 396 3.157750 ACTGTATTACCCCCGCAAAAA 57.842 42.857 0.00 0.00 0.00 1.94
418 419 7.639113 AAAAAGGAGACACAACTGTATTTCA 57.361 32.000 0.00 0.00 0.00 2.69
419 420 6.619801 AAAGGAGACACAACTGTATTTCAC 57.380 37.500 0.00 0.00 0.00 3.18
420 421 5.552870 AGGAGACACAACTGTATTTCACT 57.447 39.130 0.00 0.00 0.00 3.41
421 422 5.542779 AGGAGACACAACTGTATTTCACTC 58.457 41.667 0.00 0.00 0.00 3.51
422 423 5.070446 AGGAGACACAACTGTATTTCACTCA 59.930 40.000 0.00 0.00 0.00 3.41
423 424 5.934625 GGAGACACAACTGTATTTCACTCAT 59.065 40.000 0.00 0.00 0.00 2.90
424 425 7.039011 AGGAGACACAACTGTATTTCACTCATA 60.039 37.037 0.00 0.00 0.00 2.15
425 426 7.063544 GGAGACACAACTGTATTTCACTCATAC 59.936 40.741 0.00 0.00 0.00 2.39
426 427 7.441836 AGACACAACTGTATTTCACTCATACA 58.558 34.615 0.00 0.00 36.05 2.29
427 428 7.385205 AGACACAACTGTATTTCACTCATACAC 59.615 37.037 0.00 0.00 34.19 2.90
428 429 7.217200 ACACAACTGTATTTCACTCATACACT 58.783 34.615 0.00 0.00 34.19 3.55
429 430 7.715249 ACACAACTGTATTTCACTCATACACTT 59.285 33.333 0.00 0.00 34.19 3.16
430 431 8.223769 CACAACTGTATTTCACTCATACACTTC 58.776 37.037 0.00 0.00 34.19 3.01
431 432 7.116376 ACAACTGTATTTCACTCATACACTTCG 59.884 37.037 0.00 0.00 34.19 3.79
432 433 6.920817 ACTGTATTTCACTCATACACTTCGA 58.079 36.000 0.00 0.00 34.19 3.71
433 434 7.548097 ACTGTATTTCACTCATACACTTCGAT 58.452 34.615 0.00 0.00 34.19 3.59
434 435 8.035394 ACTGTATTTCACTCATACACTTCGATT 58.965 33.333 0.00 0.00 34.19 3.34
435 436 9.516314 CTGTATTTCACTCATACACTTCGATTA 57.484 33.333 0.00 0.00 34.19 1.75
461 462 9.783081 ATAAAATTTGAAAGTTCTTTGGCATCT 57.217 25.926 2.38 0.00 0.00 2.90
462 463 7.486802 AAATTTGAAAGTTCTTTGGCATCTG 57.513 32.000 2.38 0.00 0.00 2.90
463 464 3.648339 TGAAAGTTCTTTGGCATCTGC 57.352 42.857 2.38 0.00 41.14 4.26
464 465 3.225104 TGAAAGTTCTTTGGCATCTGCT 58.775 40.909 2.38 0.00 41.70 4.24
465 466 3.254166 TGAAAGTTCTTTGGCATCTGCTC 59.746 43.478 2.38 0.00 41.70 4.26
466 467 1.831580 AGTTCTTTGGCATCTGCTCC 58.168 50.000 1.70 0.00 41.70 4.70
467 468 0.813821 GTTCTTTGGCATCTGCTCCC 59.186 55.000 1.70 0.00 41.70 4.30
468 469 0.700564 TTCTTTGGCATCTGCTCCCT 59.299 50.000 1.70 0.00 41.70 4.20
469 470 0.254178 TCTTTGGCATCTGCTCCCTC 59.746 55.000 1.70 0.00 41.70 4.30
470 471 0.750911 CTTTGGCATCTGCTCCCTCC 60.751 60.000 1.70 0.00 41.70 4.30
471 472 1.210204 TTTGGCATCTGCTCCCTCCT 61.210 55.000 1.70 0.00 41.70 3.69
472 473 1.210204 TTGGCATCTGCTCCCTCCTT 61.210 55.000 1.70 0.00 41.70 3.36
473 474 1.148048 GGCATCTGCTCCCTCCTTC 59.852 63.158 1.70 0.00 41.70 3.46
474 475 1.148048 GCATCTGCTCCCTCCTTCC 59.852 63.158 0.00 0.00 38.21 3.46
475 476 1.835693 CATCTGCTCCCTCCTTCCC 59.164 63.158 0.00 0.00 0.00 3.97
476 477 1.764054 ATCTGCTCCCTCCTTCCCG 60.764 63.158 0.00 0.00 0.00 5.14
477 478 3.474570 CTGCTCCCTCCTTCCCGG 61.475 72.222 0.00 0.00 0.00 5.73
478 479 4.332543 TGCTCCCTCCTTCCCGGT 62.333 66.667 0.00 0.00 0.00 5.28
479 480 3.009714 GCTCCCTCCTTCCCGGTT 61.010 66.667 0.00 0.00 0.00 4.44
480 481 2.603652 GCTCCCTCCTTCCCGGTTT 61.604 63.158 0.00 0.00 0.00 3.27
481 482 1.269703 GCTCCCTCCTTCCCGGTTTA 61.270 60.000 0.00 0.00 0.00 2.01
482 483 1.508256 CTCCCTCCTTCCCGGTTTAT 58.492 55.000 0.00 0.00 0.00 1.40
483 484 2.686119 CTCCCTCCTTCCCGGTTTATA 58.314 52.381 0.00 0.00 0.00 0.98
484 485 2.633481 CTCCCTCCTTCCCGGTTTATAG 59.367 54.545 0.00 0.00 0.00 1.31
485 486 1.697982 CCCTCCTTCCCGGTTTATAGG 59.302 57.143 0.00 1.24 0.00 2.57
494 495 4.203654 CCCGGTTTATAGGGCTTATCTC 57.796 50.000 0.00 0.00 41.34 2.75
495 496 3.581332 CCCGGTTTATAGGGCTTATCTCA 59.419 47.826 0.00 0.00 41.34 3.27
496 497 4.041198 CCCGGTTTATAGGGCTTATCTCAA 59.959 45.833 0.00 0.00 41.34 3.02
497 498 5.455612 CCCGGTTTATAGGGCTTATCTCAAA 60.456 44.000 0.00 0.00 41.34 2.69
498 499 6.059484 CCGGTTTATAGGGCTTATCTCAAAA 58.941 40.000 0.00 0.00 0.00 2.44
499 500 6.544564 CCGGTTTATAGGGCTTATCTCAAAAA 59.455 38.462 0.00 0.00 0.00 1.94
500 501 7.230712 CCGGTTTATAGGGCTTATCTCAAAAAT 59.769 37.037 0.00 0.00 0.00 1.82
501 502 8.630037 CGGTTTATAGGGCTTATCTCAAAAATT 58.370 33.333 0.00 0.00 0.00 1.82
505 506 9.621629 TTATAGGGCTTATCTCAAAAATTTCGA 57.378 29.630 0.00 0.00 0.00 3.71
506 507 8.697507 ATAGGGCTTATCTCAAAAATTTCGAT 57.302 30.769 0.00 0.00 0.00 3.59
507 508 7.410120 AGGGCTTATCTCAAAAATTTCGATT 57.590 32.000 0.00 0.00 0.00 3.34
508 509 7.840931 AGGGCTTATCTCAAAAATTTCGATTT 58.159 30.769 0.00 0.00 0.00 2.17
509 510 7.976175 AGGGCTTATCTCAAAAATTTCGATTTC 59.024 33.333 0.00 0.00 0.00 2.17
510 511 7.222805 GGGCTTATCTCAAAAATTTCGATTTCC 59.777 37.037 0.00 0.00 0.00 3.13
511 512 7.222805 GGCTTATCTCAAAAATTTCGATTTCCC 59.777 37.037 0.00 0.00 0.00 3.97
512 513 7.044052 GCTTATCTCAAAAATTTCGATTTCCCG 60.044 37.037 0.00 0.00 0.00 5.14
513 514 5.699097 TCTCAAAAATTTCGATTTCCCGT 57.301 34.783 0.00 0.00 0.00 5.28
514 515 6.079424 TCTCAAAAATTTCGATTTCCCGTT 57.921 33.333 0.00 0.00 0.00 4.44
515 516 6.508777 TCTCAAAAATTTCGATTTCCCGTTT 58.491 32.000 0.00 0.00 0.00 3.60
516 517 6.981559 TCTCAAAAATTTCGATTTCCCGTTTT 59.018 30.769 0.00 0.00 0.00 2.43
517 518 8.136165 TCTCAAAAATTTCGATTTCCCGTTTTA 58.864 29.630 0.00 0.00 0.00 1.52
518 519 8.819643 TCAAAAATTTCGATTTCCCGTTTTAT 57.180 26.923 0.00 0.00 0.00 1.40
519 520 9.909644 TCAAAAATTTCGATTTCCCGTTTTATA 57.090 25.926 0.00 0.00 0.00 0.98
522 523 9.917129 AAAATTTCGATTTCCCGTTTTATAAGT 57.083 25.926 0.00 0.00 0.00 2.24
523 524 9.563898 AAATTTCGATTTCCCGTTTTATAAGTC 57.436 29.630 0.00 0.00 0.00 3.01
524 525 7.910441 TTTCGATTTCCCGTTTTATAAGTCT 57.090 32.000 0.00 0.00 0.00 3.24
525 526 7.529880 TTCGATTTCCCGTTTTATAAGTCTC 57.470 36.000 0.00 0.00 0.00 3.36
526 527 6.632909 TCGATTTCCCGTTTTATAAGTCTCA 58.367 36.000 0.00 0.00 0.00 3.27
527 528 7.098477 TCGATTTCCCGTTTTATAAGTCTCAA 58.902 34.615 0.00 0.00 0.00 3.02
528 529 7.767198 TCGATTTCCCGTTTTATAAGTCTCAAT 59.233 33.333 0.00 0.00 0.00 2.57
529 530 8.395633 CGATTTCCCGTTTTATAAGTCTCAATT 58.604 33.333 0.00 0.00 0.00 2.32
531 532 9.855021 ATTTCCCGTTTTATAAGTCTCAATTTG 57.145 29.630 0.00 0.00 0.00 2.32
532 533 8.624367 TTCCCGTTTTATAAGTCTCAATTTGA 57.376 30.769 0.00 0.00 0.00 2.69
533 534 8.801882 TCCCGTTTTATAAGTCTCAATTTGAT 57.198 30.769 0.00 0.00 0.00 2.57
534 535 9.238368 TCCCGTTTTATAAGTCTCAATTTGATT 57.762 29.630 0.00 0.00 0.00 2.57
535 536 9.289303 CCCGTTTTATAAGTCTCAATTTGATTG 57.711 33.333 0.00 0.00 41.57 2.67
536 537 9.840427 CCGTTTTATAAGTCTCAATTTGATTGT 57.160 29.630 0.00 0.00 41.02 2.71
541 542 5.728637 AAGTCTCAATTTGATTGTTCCCC 57.271 39.130 0.00 0.00 41.02 4.81
542 543 4.739793 AGTCTCAATTTGATTGTTCCCCA 58.260 39.130 0.00 0.00 41.02 4.96
543 544 5.336102 AGTCTCAATTTGATTGTTCCCCAT 58.664 37.500 0.00 0.00 41.02 4.00
544 545 5.420104 AGTCTCAATTTGATTGTTCCCCATC 59.580 40.000 0.00 0.00 41.02 3.51
545 546 5.185635 GTCTCAATTTGATTGTTCCCCATCA 59.814 40.000 0.00 0.00 41.02 3.07
546 547 5.185635 TCTCAATTTGATTGTTCCCCATCAC 59.814 40.000 0.00 0.00 41.02 3.06
547 548 4.837298 TCAATTTGATTGTTCCCCATCACA 59.163 37.500 0.00 0.00 41.02 3.58
548 549 5.484644 TCAATTTGATTGTTCCCCATCACAT 59.515 36.000 0.00 0.00 41.02 3.21
549 550 4.804868 TTTGATTGTTCCCCATCACATG 57.195 40.909 0.00 0.00 0.00 3.21
550 551 2.101783 TGATTGTTCCCCATCACATGC 58.898 47.619 0.00 0.00 0.00 4.06
551 552 2.291735 TGATTGTTCCCCATCACATGCT 60.292 45.455 0.00 0.00 0.00 3.79
552 553 1.838112 TTGTTCCCCATCACATGCTC 58.162 50.000 0.00 0.00 0.00 4.26
553 554 0.697658 TGTTCCCCATCACATGCTCA 59.302 50.000 0.00 0.00 0.00 4.26
554 555 1.340308 TGTTCCCCATCACATGCTCAG 60.340 52.381 0.00 0.00 0.00 3.35
555 556 1.065199 GTTCCCCATCACATGCTCAGA 60.065 52.381 0.00 0.00 0.00 3.27
556 557 1.514983 TCCCCATCACATGCTCAGAT 58.485 50.000 0.00 0.00 0.00 2.90
557 558 1.848388 TCCCCATCACATGCTCAGATT 59.152 47.619 0.00 0.00 0.00 2.40
558 559 2.242965 TCCCCATCACATGCTCAGATTT 59.757 45.455 0.00 0.00 0.00 2.17
559 560 3.028850 CCCCATCACATGCTCAGATTTT 58.971 45.455 0.00 0.00 0.00 1.82
560 561 4.079844 TCCCCATCACATGCTCAGATTTTA 60.080 41.667 0.00 0.00 0.00 1.52
561 562 4.646040 CCCCATCACATGCTCAGATTTTAA 59.354 41.667 0.00 0.00 0.00 1.52
562 563 5.127519 CCCCATCACATGCTCAGATTTTAAA 59.872 40.000 0.00 0.00 0.00 1.52
563 564 6.183360 CCCCATCACATGCTCAGATTTTAAAT 60.183 38.462 0.00 0.00 0.00 1.40
564 565 7.270047 CCCATCACATGCTCAGATTTTAAATT 58.730 34.615 0.00 0.00 0.00 1.82
565 566 7.223971 CCCATCACATGCTCAGATTTTAAATTG 59.776 37.037 0.00 0.00 0.00 2.32
566 567 7.254319 CCATCACATGCTCAGATTTTAAATTGC 60.254 37.037 0.00 0.00 0.00 3.56
567 568 6.689554 TCACATGCTCAGATTTTAAATTGCA 58.310 32.000 0.00 9.50 0.00 4.08
568 569 7.324935 TCACATGCTCAGATTTTAAATTGCAT 58.675 30.769 12.03 12.03 39.99 3.96
569 570 7.820386 TCACATGCTCAGATTTTAAATTGCATT 59.180 29.630 13.85 0.00 37.74 3.56
570 571 9.089601 CACATGCTCAGATTTTAAATTGCATTA 57.910 29.630 13.85 0.00 37.74 1.90
571 572 9.656040 ACATGCTCAGATTTTAAATTGCATTAA 57.344 25.926 13.85 0.00 37.74 1.40
587 588 7.773864 TTGCATTAATTCATTACATGCAAGG 57.226 32.000 22.14 0.00 42.77 3.61
588 589 7.110043 TGCATTAATTCATTACATGCAAGGA 57.890 32.000 17.66 0.00 40.05 3.36
589 590 7.728148 TGCATTAATTCATTACATGCAAGGAT 58.272 30.769 17.66 0.00 40.05 3.24
590 591 8.205512 TGCATTAATTCATTACATGCAAGGATT 58.794 29.630 17.66 0.00 40.05 3.01
591 592 9.695526 GCATTAATTCATTACATGCAAGGATTA 57.304 29.630 14.93 0.00 37.09 1.75
596 597 8.929260 ATTCATTACATGCAAGGATTATGAGA 57.071 30.769 0.00 0.00 0.00 3.27
597 598 8.750515 TTCATTACATGCAAGGATTATGAGAA 57.249 30.769 0.00 0.00 0.00 2.87
598 599 8.750515 TCATTACATGCAAGGATTATGAGAAA 57.249 30.769 0.00 0.00 0.00 2.52
599 600 8.623903 TCATTACATGCAAGGATTATGAGAAAC 58.376 33.333 0.00 0.00 0.00 2.78
600 601 8.627403 CATTACATGCAAGGATTATGAGAAACT 58.373 33.333 0.00 0.00 0.00 2.66
601 602 8.579850 TTACATGCAAGGATTATGAGAAACTT 57.420 30.769 0.00 0.00 0.00 2.66
602 603 6.860080 ACATGCAAGGATTATGAGAAACTTG 58.140 36.000 0.00 0.00 38.57 3.16
603 604 6.660521 ACATGCAAGGATTATGAGAAACTTGA 59.339 34.615 10.44 0.00 37.98 3.02
604 605 6.500684 TGCAAGGATTATGAGAAACTTGAC 57.499 37.500 10.44 4.50 37.98 3.18
605 606 5.415701 TGCAAGGATTATGAGAAACTTGACC 59.584 40.000 10.44 0.00 37.98 4.02
606 607 5.415701 GCAAGGATTATGAGAAACTTGACCA 59.584 40.000 10.44 0.00 37.98 4.02
607 608 6.071952 GCAAGGATTATGAGAAACTTGACCAA 60.072 38.462 10.44 0.00 37.98 3.67
608 609 7.363268 GCAAGGATTATGAGAAACTTGACCAAT 60.363 37.037 10.44 0.00 37.98 3.16
609 610 7.636150 AGGATTATGAGAAACTTGACCAATG 57.364 36.000 0.00 0.00 0.00 2.82
610 611 6.096001 AGGATTATGAGAAACTTGACCAATGC 59.904 38.462 0.00 0.00 0.00 3.56
611 612 6.127647 GGATTATGAGAAACTTGACCAATGCA 60.128 38.462 0.00 0.00 0.00 3.96
612 613 6.839124 TTATGAGAAACTTGACCAATGCAT 57.161 33.333 0.00 0.00 0.00 3.96
613 614 7.936496 TTATGAGAAACTTGACCAATGCATA 57.064 32.000 0.00 0.00 0.00 3.14
614 615 8.523915 TTATGAGAAACTTGACCAATGCATAT 57.476 30.769 0.00 0.00 0.00 1.78
615 616 9.625747 TTATGAGAAACTTGACCAATGCATATA 57.374 29.630 0.00 0.00 0.00 0.86
616 617 7.936496 TGAGAAACTTGACCAATGCATATAA 57.064 32.000 0.00 0.00 0.00 0.98
617 618 8.523915 TGAGAAACTTGACCAATGCATATAAT 57.476 30.769 0.00 0.00 0.00 1.28
618 619 8.970020 TGAGAAACTTGACCAATGCATATAATT 58.030 29.630 0.00 0.00 0.00 1.40
619 620 9.455847 GAGAAACTTGACCAATGCATATAATTC 57.544 33.333 0.00 0.00 0.00 2.17
620 621 8.970020 AGAAACTTGACCAATGCATATAATTCA 58.030 29.630 0.00 0.00 0.00 2.57
621 622 9.754382 GAAACTTGACCAATGCATATAATTCAT 57.246 29.630 0.00 0.00 0.00 2.57
622 623 9.537192 AAACTTGACCAATGCATATAATTCATG 57.463 29.630 0.00 4.20 0.00 3.07
773 777 6.867816 TGACTAGCGATTTAACCGTTTTTCTA 59.132 34.615 0.00 0.00 0.00 2.10
899 943 2.930019 CCACCCTGCTCCCACTCA 60.930 66.667 0.00 0.00 0.00 3.41
980 1041 1.285023 CGTCTTTGAGGTCGGTCGT 59.715 57.895 0.00 0.00 0.00 4.34
1020 1081 0.181587 TGCCTTCCTGGAACAACGAA 59.818 50.000 4.68 0.00 38.70 3.85
1714 1817 9.468532 GTTAATCATGGAATTGAAATAAGCTCC 57.531 33.333 0.00 0.00 0.00 4.70
1715 1818 7.909485 AATCATGGAATTGAAATAAGCTCCT 57.091 32.000 0.00 0.00 0.00 3.69
1717 1820 8.632906 ATCATGGAATTGAAATAAGCTCCTAG 57.367 34.615 0.00 0.00 0.00 3.02
1718 1821 7.577303 TCATGGAATTGAAATAAGCTCCTAGT 58.423 34.615 0.00 0.00 0.00 2.57
1719 1822 7.716998 TCATGGAATTGAAATAAGCTCCTAGTC 59.283 37.037 0.00 0.00 0.00 2.59
1720 1823 6.357367 TGGAATTGAAATAAGCTCCTAGTCC 58.643 40.000 0.00 0.00 0.00 3.85
1721 1824 6.069673 TGGAATTGAAATAAGCTCCTAGTCCA 60.070 38.462 0.00 0.00 0.00 4.02
1722 1825 7.001073 GGAATTGAAATAAGCTCCTAGTCCAT 58.999 38.462 0.00 0.00 0.00 3.41
1723 1826 7.503902 GGAATTGAAATAAGCTCCTAGTCCATT 59.496 37.037 0.00 0.00 0.00 3.16
1724 1827 8.829373 AATTGAAATAAGCTCCTAGTCCATTT 57.171 30.769 0.00 0.00 0.00 2.32
1725 1828 7.630242 TTGAAATAAGCTCCTAGTCCATTTG 57.370 36.000 0.00 0.00 0.00 2.32
1726 1829 6.721318 TGAAATAAGCTCCTAGTCCATTTGT 58.279 36.000 0.00 0.00 0.00 2.83
1727 1830 7.857456 TGAAATAAGCTCCTAGTCCATTTGTA 58.143 34.615 0.00 0.00 0.00 2.41
1728 1831 8.325787 TGAAATAAGCTCCTAGTCCATTTGTAA 58.674 33.333 0.00 0.00 0.00 2.41
1729 1832 9.343539 GAAATAAGCTCCTAGTCCATTTGTAAT 57.656 33.333 0.00 0.00 0.00 1.89
1732 1835 9.780186 ATAAGCTCCTAGTCCATTTGTAATAAC 57.220 33.333 0.00 0.00 0.00 1.89
1733 1836 7.439108 AGCTCCTAGTCCATTTGTAATAACT 57.561 36.000 0.00 0.00 0.00 2.24
1734 1837 7.862675 AGCTCCTAGTCCATTTGTAATAACTT 58.137 34.615 0.00 0.00 0.00 2.66
1735 1838 8.989131 AGCTCCTAGTCCATTTGTAATAACTTA 58.011 33.333 0.00 0.00 0.00 2.24
1736 1839 9.780186 GCTCCTAGTCCATTTGTAATAACTTAT 57.220 33.333 0.00 0.00 0.00 1.73
1939 2099 3.207044 AGGGTACAGGACAAGGAGAAT 57.793 47.619 0.00 0.00 0.00 2.40
2004 2164 0.609131 TTGGCCAAGCTTAGGACTGC 60.609 55.000 16.05 6.92 34.31 4.40
2093 2253 1.429930 TTGTAGGGTGGACAAGCAGA 58.570 50.000 0.00 0.00 33.03 4.26
2101 2261 2.552155 GGTGGACAAGCAGATGTACCAA 60.552 50.000 0.00 0.00 33.81 3.67
2134 2294 5.478407 GAGGAGGAAGAACTTGAGAAGAAG 58.522 45.833 0.00 0.00 0.00 2.85
2135 2295 5.151454 AGGAGGAAGAACTTGAGAAGAAGA 58.849 41.667 0.00 0.00 0.00 2.87
2136 2296 5.604650 AGGAGGAAGAACTTGAGAAGAAGAA 59.395 40.000 0.00 0.00 0.00 2.52
2137 2297 5.931724 GGAGGAAGAACTTGAGAAGAAGAAG 59.068 44.000 0.00 0.00 0.00 2.85
2138 2298 6.239458 GGAGGAAGAACTTGAGAAGAAGAAGA 60.239 42.308 0.00 0.00 0.00 2.87
2139 2299 7.130681 AGGAAGAACTTGAGAAGAAGAAGAA 57.869 36.000 0.00 0.00 0.00 2.52
2140 2300 7.216494 AGGAAGAACTTGAGAAGAAGAAGAAG 58.784 38.462 0.00 0.00 0.00 2.85
2141 2301 7.070571 AGGAAGAACTTGAGAAGAAGAAGAAGA 59.929 37.037 0.00 0.00 0.00 2.87
2142 2302 7.713073 GGAAGAACTTGAGAAGAAGAAGAAGAA 59.287 37.037 0.00 0.00 0.00 2.52
2143 2303 8.661352 AAGAACTTGAGAAGAAGAAGAAGAAG 57.339 34.615 0.00 0.00 0.00 2.85
2144 2304 8.017418 AGAACTTGAGAAGAAGAAGAAGAAGA 57.983 34.615 0.00 0.00 0.00 2.87
2145 2305 8.482128 AGAACTTGAGAAGAAGAAGAAGAAGAA 58.518 33.333 0.00 0.00 0.00 2.52
2279 2448 4.103153 CCAGGAAGGCTATGAAGGATGTTA 59.897 45.833 0.00 0.00 0.00 2.41
2339 2508 2.042686 TGAGCTTGTTGTTGCTGAGT 57.957 45.000 0.00 0.00 39.91 3.41
2950 3227 0.324943 GGAGGTTAGGACAGCAGCAA 59.675 55.000 0.00 0.00 0.00 3.91
2958 3244 1.281960 GACAGCAGCAACAGCACAG 59.718 57.895 0.00 0.00 0.00 3.66
2959 3245 1.153107 ACAGCAGCAACAGCACAGA 60.153 52.632 0.00 0.00 0.00 3.41
2960 3246 1.164662 ACAGCAGCAACAGCACAGAG 61.165 55.000 0.00 0.00 0.00 3.35
2961 3247 1.600076 AGCAGCAACAGCACAGAGG 60.600 57.895 0.00 0.00 0.00 3.69
2962 3248 1.598962 GCAGCAACAGCACAGAGGA 60.599 57.895 0.00 0.00 0.00 3.71
2963 3249 1.575576 GCAGCAACAGCACAGAGGAG 61.576 60.000 0.00 0.00 0.00 3.69
2964 3250 0.954449 CAGCAACAGCACAGAGGAGG 60.954 60.000 0.00 0.00 0.00 4.30
2965 3251 1.123861 AGCAACAGCACAGAGGAGGA 61.124 55.000 0.00 0.00 0.00 3.71
2966 3252 0.673022 GCAACAGCACAGAGGAGGAG 60.673 60.000 0.00 0.00 0.00 3.69
2967 3253 0.036577 CAACAGCACAGAGGAGGAGG 60.037 60.000 0.00 0.00 0.00 4.30
2968 3254 0.178921 AACAGCACAGAGGAGGAGGA 60.179 55.000 0.00 0.00 0.00 3.71
2969 3255 0.614415 ACAGCACAGAGGAGGAGGAG 60.614 60.000 0.00 0.00 0.00 3.69
3295 3601 8.421784 TCTATGTTGGTGTTCTATGTAAGATCC 58.578 37.037 0.00 0.00 33.05 3.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 1.126846 CATCCTGTCAAAAGCGACGAC 59.873 52.381 0.00 0.00 38.84 4.34
2 3 1.428448 CATCCTGTCAAAAGCGACGA 58.572 50.000 0.00 0.00 38.84 4.20
3 4 0.179215 GCATCCTGTCAAAAGCGACG 60.179 55.000 0.00 0.00 38.84 5.12
4 5 0.874390 TGCATCCTGTCAAAAGCGAC 59.126 50.000 0.00 0.00 36.40 5.19
5 6 1.469703 CATGCATCCTGTCAAAAGCGA 59.530 47.619 0.00 0.00 0.00 4.93
6 7 1.904144 CATGCATCCTGTCAAAAGCG 58.096 50.000 0.00 0.00 0.00 4.68
7 8 1.636988 GCATGCATCCTGTCAAAAGC 58.363 50.000 14.21 0.00 0.00 3.51
8 9 1.822990 AGGCATGCATCCTGTCAAAAG 59.177 47.619 21.36 0.00 31.53 2.27
9 10 1.820519 GAGGCATGCATCCTGTCAAAA 59.179 47.619 21.41 0.00 33.24 2.44
10 11 1.466856 GAGGCATGCATCCTGTCAAA 58.533 50.000 21.41 0.00 33.24 2.69
11 12 0.745486 CGAGGCATGCATCCTGTCAA 60.745 55.000 25.30 0.00 33.24 3.18
12 13 1.153309 CGAGGCATGCATCCTGTCA 60.153 57.895 25.30 0.00 33.24 3.58
13 14 0.879400 CTCGAGGCATGCATCCTGTC 60.879 60.000 25.30 2.21 33.24 3.51
14 15 1.145598 CTCGAGGCATGCATCCTGT 59.854 57.895 25.30 0.00 33.24 4.00
15 16 0.463295 AACTCGAGGCATGCATCCTG 60.463 55.000 25.30 19.47 33.24 3.86
16 17 0.254178 AAACTCGAGGCATGCATCCT 59.746 50.000 25.30 10.74 36.46 3.24
17 18 0.379669 CAAACTCGAGGCATGCATCC 59.620 55.000 25.30 9.68 0.00 3.51
18 19 0.379669 CCAAACTCGAGGCATGCATC 59.620 55.000 22.03 22.03 0.00 3.91
19 20 0.035152 TCCAAACTCGAGGCATGCAT 60.035 50.000 21.36 13.78 0.00 3.96
20 21 0.955428 GTCCAAACTCGAGGCATGCA 60.955 55.000 21.36 0.00 0.00 3.96
21 22 0.674895 AGTCCAAACTCGAGGCATGC 60.675 55.000 18.41 9.90 0.00 4.06
22 23 2.166459 TCTAGTCCAAACTCGAGGCATG 59.834 50.000 18.41 11.92 36.92 4.06
23 24 2.428890 CTCTAGTCCAAACTCGAGGCAT 59.571 50.000 18.41 0.00 40.13 4.40
24 25 1.819288 CTCTAGTCCAAACTCGAGGCA 59.181 52.381 18.41 0.00 40.13 4.75
25 26 1.819903 ACTCTAGTCCAAACTCGAGGC 59.180 52.381 18.41 0.00 45.23 4.70
26 27 3.082548 TCACTCTAGTCCAAACTCGAGG 58.917 50.000 18.41 0.00 45.23 4.63
27 28 3.502595 TGTCACTCTAGTCCAAACTCGAG 59.497 47.826 11.84 11.84 45.98 4.04
28 29 3.483421 TGTCACTCTAGTCCAAACTCGA 58.517 45.455 0.00 0.00 36.92 4.04
29 30 3.917329 TGTCACTCTAGTCCAAACTCG 57.083 47.619 0.00 0.00 36.92 4.18
30 31 3.982058 CGTTGTCACTCTAGTCCAAACTC 59.018 47.826 0.00 0.00 36.92 3.01
31 32 3.635373 TCGTTGTCACTCTAGTCCAAACT 59.365 43.478 0.00 0.00 39.66 2.66
32 33 3.734735 GTCGTTGTCACTCTAGTCCAAAC 59.265 47.826 0.00 0.00 0.00 2.93
33 34 3.382227 TGTCGTTGTCACTCTAGTCCAAA 59.618 43.478 0.00 0.00 0.00 3.28
34 35 2.953648 TGTCGTTGTCACTCTAGTCCAA 59.046 45.455 0.00 0.00 0.00 3.53
35 36 2.578786 TGTCGTTGTCACTCTAGTCCA 58.421 47.619 0.00 0.00 0.00 4.02
36 37 3.637998 TTGTCGTTGTCACTCTAGTCC 57.362 47.619 0.00 0.00 0.00 3.85
37 38 3.365220 GCATTGTCGTTGTCACTCTAGTC 59.635 47.826 0.00 0.00 0.00 2.59
38 39 3.318017 GCATTGTCGTTGTCACTCTAGT 58.682 45.455 0.00 0.00 0.00 2.57
39 40 2.668457 GGCATTGTCGTTGTCACTCTAG 59.332 50.000 0.00 0.00 0.00 2.43
40 41 2.299013 AGGCATTGTCGTTGTCACTCTA 59.701 45.455 0.00 0.00 0.00 2.43
41 42 1.070758 AGGCATTGTCGTTGTCACTCT 59.929 47.619 0.00 0.00 0.00 3.24
42 43 1.461127 GAGGCATTGTCGTTGTCACTC 59.539 52.381 0.00 0.00 0.00 3.51
43 44 1.512926 GAGGCATTGTCGTTGTCACT 58.487 50.000 0.00 0.00 0.00 3.41
44 45 0.163788 CGAGGCATTGTCGTTGTCAC 59.836 55.000 0.00 0.00 32.62 3.67
45 46 0.032815 TCGAGGCATTGTCGTTGTCA 59.967 50.000 0.00 0.00 38.60 3.58
46 47 0.716108 CTCGAGGCATTGTCGTTGTC 59.284 55.000 3.91 0.00 38.60 3.18
47 48 1.291877 GCTCGAGGCATTGTCGTTGT 61.292 55.000 15.58 0.00 41.35 3.32
48 49 1.421485 GCTCGAGGCATTGTCGTTG 59.579 57.895 15.58 0.00 41.35 4.10
49 50 3.876300 GCTCGAGGCATTGTCGTT 58.124 55.556 15.58 0.00 41.35 3.85
58 59 6.348050 CCATAAGATTAGAAAATGCTCGAGGC 60.348 42.308 15.58 7.24 42.22 4.70
59 60 6.931281 TCCATAAGATTAGAAAATGCTCGAGG 59.069 38.462 15.58 0.00 0.00 4.63
60 61 7.953158 TCCATAAGATTAGAAAATGCTCGAG 57.047 36.000 8.45 8.45 0.00 4.04
61 62 7.329471 CGATCCATAAGATTAGAAAATGCTCGA 59.671 37.037 0.00 0.00 34.42 4.04
62 63 7.412346 CCGATCCATAAGATTAGAAAATGCTCG 60.412 40.741 0.00 0.00 34.42 5.03
63 64 7.604164 TCCGATCCATAAGATTAGAAAATGCTC 59.396 37.037 0.00 0.00 34.42 4.26
64 65 7.453393 TCCGATCCATAAGATTAGAAAATGCT 58.547 34.615 0.00 0.00 34.42 3.79
65 66 7.672983 TCCGATCCATAAGATTAGAAAATGC 57.327 36.000 0.00 0.00 34.42 3.56
66 67 9.440773 TCATCCGATCCATAAGATTAGAAAATG 57.559 33.333 0.00 0.00 34.42 2.32
70 71 8.918116 CCTATCATCCGATCCATAAGATTAGAA 58.082 37.037 0.00 0.00 34.42 2.10
71 72 7.014711 GCCTATCATCCGATCCATAAGATTAGA 59.985 40.741 0.00 0.00 34.42 2.10
72 73 7.151308 GCCTATCATCCGATCCATAAGATTAG 58.849 42.308 0.00 0.00 34.42 1.73
73 74 6.042093 GGCCTATCATCCGATCCATAAGATTA 59.958 42.308 0.00 0.00 34.42 1.75
74 75 5.163258 GGCCTATCATCCGATCCATAAGATT 60.163 44.000 0.00 0.00 34.42 2.40
75 76 4.346418 GGCCTATCATCCGATCCATAAGAT 59.654 45.833 0.00 0.00 38.17 2.40
76 77 3.706594 GGCCTATCATCCGATCCATAAGA 59.293 47.826 0.00 0.00 32.73 2.10
77 78 4.065321 GGCCTATCATCCGATCCATAAG 57.935 50.000 0.00 0.00 32.73 1.73
87 88 0.952984 GCTTCAGCGGCCTATCATCC 60.953 60.000 0.00 0.00 0.00 3.51
88 89 0.952984 GGCTTCAGCGGCCTATCATC 60.953 60.000 0.00 0.00 45.57 2.92
89 90 1.072159 GGCTTCAGCGGCCTATCAT 59.928 57.895 0.00 0.00 45.57 2.45
90 91 2.505982 GGCTTCAGCGGCCTATCA 59.494 61.111 0.00 0.00 45.57 2.15
91 92 2.644555 TTCGGCTTCAGCGGCCTATC 62.645 60.000 0.00 0.00 46.73 2.08
92 93 2.650813 CTTCGGCTTCAGCGGCCTAT 62.651 60.000 0.00 0.00 46.73 2.57
93 94 3.371097 CTTCGGCTTCAGCGGCCTA 62.371 63.158 0.00 0.00 46.73 3.93
94 95 4.767255 CTTCGGCTTCAGCGGCCT 62.767 66.667 0.00 0.00 46.73 5.19
95 96 4.760047 TCTTCGGCTTCAGCGGCC 62.760 66.667 0.00 0.00 45.57 6.13
96 97 2.512515 ATCTTCGGCTTCAGCGGC 60.513 61.111 1.56 0.00 43.26 6.53
97 98 1.153568 TCATCTTCGGCTTCAGCGG 60.154 57.895 0.00 0.00 43.26 5.52
98 99 1.746727 CGTCATCTTCGGCTTCAGCG 61.747 60.000 0.00 0.00 43.26 5.18
99 100 0.458543 TCGTCATCTTCGGCTTCAGC 60.459 55.000 0.00 0.00 41.14 4.26
100 101 2.215907 ATCGTCATCTTCGGCTTCAG 57.784 50.000 0.00 0.00 0.00 3.02
101 102 2.543861 GCTATCGTCATCTTCGGCTTCA 60.544 50.000 0.00 0.00 0.00 3.02
102 103 2.055100 GCTATCGTCATCTTCGGCTTC 58.945 52.381 0.00 0.00 0.00 3.86
103 104 1.683917 AGCTATCGTCATCTTCGGCTT 59.316 47.619 0.00 0.00 0.00 4.35
104 105 1.323412 AGCTATCGTCATCTTCGGCT 58.677 50.000 0.00 0.00 0.00 5.52
105 106 2.141535 AAGCTATCGTCATCTTCGGC 57.858 50.000 0.00 0.00 0.00 5.54
106 107 3.706698 TGAAAGCTATCGTCATCTTCGG 58.293 45.455 0.00 0.00 0.00 4.30
107 108 4.205996 CACTGAAAGCTATCGTCATCTTCG 59.794 45.833 0.00 0.00 37.60 3.79
108 109 4.026145 GCACTGAAAGCTATCGTCATCTTC 60.026 45.833 0.00 0.00 37.60 2.87
109 110 3.868077 GCACTGAAAGCTATCGTCATCTT 59.132 43.478 0.00 0.00 37.60 2.40
110 111 3.452474 GCACTGAAAGCTATCGTCATCT 58.548 45.455 0.00 0.00 37.60 2.90
111 112 2.217393 CGCACTGAAAGCTATCGTCATC 59.783 50.000 0.00 0.00 37.60 2.92
112 113 2.196749 CGCACTGAAAGCTATCGTCAT 58.803 47.619 0.00 0.00 37.60 3.06
113 114 1.629013 CGCACTGAAAGCTATCGTCA 58.371 50.000 0.00 0.00 37.60 4.35
114 115 0.299003 GCGCACTGAAAGCTATCGTC 59.701 55.000 0.30 0.00 37.60 4.20
115 116 0.389817 TGCGCACTGAAAGCTATCGT 60.390 50.000 5.66 0.00 37.60 3.73
116 117 0.025513 GTGCGCACTGAAAGCTATCG 59.974 55.000 32.55 0.00 37.60 2.92
117 118 0.025513 CGTGCGCACTGAAAGCTATC 59.974 55.000 35.27 7.56 37.60 2.08
118 119 0.389817 TCGTGCGCACTGAAAGCTAT 60.390 50.000 35.27 0.00 37.60 2.97
119 120 1.006688 TCGTGCGCACTGAAAGCTA 60.007 52.632 35.27 11.21 37.60 3.32
120 121 2.280119 TCGTGCGCACTGAAAGCT 60.280 55.556 35.27 0.00 37.60 3.74
121 122 2.171940 CTCGTGCGCACTGAAAGC 59.828 61.111 35.27 10.44 37.60 3.51
122 123 1.621301 CTCCTCGTGCGCACTGAAAG 61.621 60.000 35.27 25.54 42.29 2.62
123 124 1.664649 CTCCTCGTGCGCACTGAAA 60.665 57.895 35.27 21.78 0.00 2.69
124 125 2.049156 CTCCTCGTGCGCACTGAA 60.049 61.111 35.27 20.52 0.00 3.02
125 126 2.983592 TCTCCTCGTGCGCACTGA 60.984 61.111 35.27 29.75 0.00 3.41
126 127 2.807045 GTCTCCTCGTGCGCACTG 60.807 66.667 35.27 27.59 0.00 3.66
127 128 2.363711 TTTGTCTCCTCGTGCGCACT 62.364 55.000 35.27 0.00 0.00 4.40
128 129 1.891060 CTTTGTCTCCTCGTGCGCAC 61.891 60.000 30.42 30.42 0.00 5.34
129 130 1.664649 CTTTGTCTCCTCGTGCGCA 60.665 57.895 5.66 5.66 0.00 6.09
130 131 1.618640 GACTTTGTCTCCTCGTGCGC 61.619 60.000 0.00 0.00 0.00 6.09
131 132 0.318699 TGACTTTGTCTCCTCGTGCG 60.319 55.000 0.00 0.00 33.15 5.34
132 133 1.996191 GATGACTTTGTCTCCTCGTGC 59.004 52.381 0.00 0.00 33.15 5.34
133 134 2.611518 GGATGACTTTGTCTCCTCGTG 58.388 52.381 0.00 0.00 33.15 4.35
134 135 1.550976 GGGATGACTTTGTCTCCTCGT 59.449 52.381 12.39 0.00 33.55 4.18
135 136 1.827969 AGGGATGACTTTGTCTCCTCG 59.172 52.381 12.39 0.00 33.55 4.63
136 137 3.103742 AGAGGGATGACTTTGTCTCCTC 58.896 50.000 18.01 18.01 40.88 3.71
137 138 2.836981 CAGAGGGATGACTTTGTCTCCT 59.163 50.000 12.39 9.95 33.55 3.69
138 139 2.679349 GCAGAGGGATGACTTTGTCTCC 60.679 54.545 0.00 4.13 33.15 3.71
139 140 2.027745 TGCAGAGGGATGACTTTGTCTC 60.028 50.000 0.00 0.00 33.15 3.36
140 141 1.980765 TGCAGAGGGATGACTTTGTCT 59.019 47.619 0.00 0.00 33.15 3.41
141 142 2.479566 TGCAGAGGGATGACTTTGTC 57.520 50.000 0.00 0.00 0.00 3.18
142 143 2.575279 AGATGCAGAGGGATGACTTTGT 59.425 45.455 0.00 0.00 0.00 2.83
143 144 2.943690 CAGATGCAGAGGGATGACTTTG 59.056 50.000 0.00 0.00 0.00 2.77
144 145 2.092538 CCAGATGCAGAGGGATGACTTT 60.093 50.000 0.00 0.00 0.00 2.66
145 146 1.489649 CCAGATGCAGAGGGATGACTT 59.510 52.381 0.00 0.00 0.00 3.01
146 147 1.129917 CCAGATGCAGAGGGATGACT 58.870 55.000 0.00 0.00 0.00 3.41
147 148 0.534652 GCCAGATGCAGAGGGATGAC 60.535 60.000 4.63 0.00 40.77 3.06
148 149 1.703014 GGCCAGATGCAGAGGGATGA 61.703 60.000 0.00 0.00 43.89 2.92
149 150 1.228184 GGCCAGATGCAGAGGGATG 60.228 63.158 0.00 0.00 43.89 3.51
150 151 2.459086 GGGCCAGATGCAGAGGGAT 61.459 63.158 4.39 0.00 43.89 3.85
151 152 3.092511 GGGCCAGATGCAGAGGGA 61.093 66.667 4.39 0.00 43.89 4.20
152 153 2.503846 TTTGGGCCAGATGCAGAGGG 62.504 60.000 6.23 0.00 43.89 4.30
153 154 0.612732 TTTTGGGCCAGATGCAGAGG 60.613 55.000 6.23 0.00 43.89 3.69
154 155 1.136305 CATTTTGGGCCAGATGCAGAG 59.864 52.381 16.01 0.00 43.89 3.35
155 156 1.187974 CATTTTGGGCCAGATGCAGA 58.812 50.000 16.01 0.00 43.89 4.26
156 157 0.899720 ACATTTTGGGCCAGATGCAG 59.100 50.000 23.84 10.39 43.89 4.41
157 158 2.228545 TACATTTTGGGCCAGATGCA 57.771 45.000 23.84 13.82 43.89 3.96
158 159 2.497273 AGTTACATTTTGGGCCAGATGC 59.503 45.455 23.84 12.90 40.16 3.91
159 160 3.676873 GCAGTTACATTTTGGGCCAGATG 60.677 47.826 22.86 22.86 0.00 2.90
160 161 2.497273 GCAGTTACATTTTGGGCCAGAT 59.503 45.455 6.23 2.05 0.00 2.90
161 162 1.892474 GCAGTTACATTTTGGGCCAGA 59.108 47.619 6.23 0.00 0.00 3.86
162 163 1.895131 AGCAGTTACATTTTGGGCCAG 59.105 47.619 6.23 0.00 0.00 4.85
163 164 1.617850 CAGCAGTTACATTTTGGGCCA 59.382 47.619 0.00 0.00 0.00 5.36
164 165 1.618343 ACAGCAGTTACATTTTGGGCC 59.382 47.619 0.00 0.00 0.00 5.80
165 166 2.035832 ACACAGCAGTTACATTTTGGGC 59.964 45.455 0.00 0.00 0.00 5.36
166 167 3.068024 ACACACAGCAGTTACATTTTGGG 59.932 43.478 0.00 0.00 0.00 4.12
167 168 4.305989 ACACACAGCAGTTACATTTTGG 57.694 40.909 0.00 0.00 0.00 3.28
168 169 5.008613 ACCTACACACAGCAGTTACATTTTG 59.991 40.000 0.00 0.00 0.00 2.44
169 170 5.130350 ACCTACACACAGCAGTTACATTTT 58.870 37.500 0.00 0.00 0.00 1.82
170 171 4.714632 ACCTACACACAGCAGTTACATTT 58.285 39.130 0.00 0.00 0.00 2.32
171 172 4.351874 ACCTACACACAGCAGTTACATT 57.648 40.909 0.00 0.00 0.00 2.71
172 173 4.202315 TGAACCTACACACAGCAGTTACAT 60.202 41.667 0.00 0.00 0.00 2.29
173 174 3.133183 TGAACCTACACACAGCAGTTACA 59.867 43.478 0.00 0.00 0.00 2.41
174 175 3.724374 TGAACCTACACACAGCAGTTAC 58.276 45.455 0.00 0.00 0.00 2.50
175 176 4.409718 TTGAACCTACACACAGCAGTTA 57.590 40.909 0.00 0.00 0.00 2.24
176 177 3.275617 TTGAACCTACACACAGCAGTT 57.724 42.857 0.00 0.00 0.00 3.16
177 178 3.275617 TTTGAACCTACACACAGCAGT 57.724 42.857 0.00 0.00 0.00 4.40
178 179 4.836125 ATTTTGAACCTACACACAGCAG 57.164 40.909 0.00 0.00 0.00 4.24
179 180 5.825679 ACTAATTTTGAACCTACACACAGCA 59.174 36.000 0.00 0.00 0.00 4.41
180 181 6.313744 ACTAATTTTGAACCTACACACAGC 57.686 37.500 0.00 0.00 0.00 4.40
181 182 8.380644 CGATACTAATTTTGAACCTACACACAG 58.619 37.037 0.00 0.00 0.00 3.66
182 183 7.332430 CCGATACTAATTTTGAACCTACACACA 59.668 37.037 0.00 0.00 0.00 3.72
183 184 7.546667 TCCGATACTAATTTTGAACCTACACAC 59.453 37.037 0.00 0.00 0.00 3.82
184 185 7.613585 TCCGATACTAATTTTGAACCTACACA 58.386 34.615 0.00 0.00 0.00 3.72
185 186 7.224167 CCTCCGATACTAATTTTGAACCTACAC 59.776 40.741 0.00 0.00 0.00 2.90
186 187 7.124599 TCCTCCGATACTAATTTTGAACCTACA 59.875 37.037 0.00 0.00 0.00 2.74
187 188 7.495055 TCCTCCGATACTAATTTTGAACCTAC 58.505 38.462 0.00 0.00 0.00 3.18
188 189 7.664552 TCCTCCGATACTAATTTTGAACCTA 57.335 36.000 0.00 0.00 0.00 3.08
189 190 6.555463 TCCTCCGATACTAATTTTGAACCT 57.445 37.500 0.00 0.00 0.00 3.50
190 191 6.204882 CCATCCTCCGATACTAATTTTGAACC 59.795 42.308 0.00 0.00 0.00 3.62
191 192 6.766467 ACCATCCTCCGATACTAATTTTGAAC 59.234 38.462 0.00 0.00 0.00 3.18
192 193 6.895782 ACCATCCTCCGATACTAATTTTGAA 58.104 36.000 0.00 0.00 0.00 2.69
193 194 6.099125 TGACCATCCTCCGATACTAATTTTGA 59.901 38.462 0.00 0.00 0.00 2.69
194 195 6.288294 TGACCATCCTCCGATACTAATTTTG 58.712 40.000 0.00 0.00 0.00 2.44
195 196 6.494666 TGACCATCCTCCGATACTAATTTT 57.505 37.500 0.00 0.00 0.00 1.82
196 197 6.270000 TCATGACCATCCTCCGATACTAATTT 59.730 38.462 0.00 0.00 0.00 1.82
197 198 5.780282 TCATGACCATCCTCCGATACTAATT 59.220 40.000 0.00 0.00 0.00 1.40
198 199 5.333581 TCATGACCATCCTCCGATACTAAT 58.666 41.667 0.00 0.00 0.00 1.73
199 200 4.736473 TCATGACCATCCTCCGATACTAA 58.264 43.478 0.00 0.00 0.00 2.24
200 201 4.382386 TCATGACCATCCTCCGATACTA 57.618 45.455 0.00 0.00 0.00 1.82
201 202 3.244887 TCATGACCATCCTCCGATACT 57.755 47.619 0.00 0.00 0.00 2.12
202 203 3.574396 TCTTCATGACCATCCTCCGATAC 59.426 47.826 0.00 0.00 0.00 2.24
203 204 3.844640 TCTTCATGACCATCCTCCGATA 58.155 45.455 0.00 0.00 0.00 2.92
204 205 2.682594 TCTTCATGACCATCCTCCGAT 58.317 47.619 0.00 0.00 0.00 4.18
205 206 2.159179 TCTTCATGACCATCCTCCGA 57.841 50.000 0.00 0.00 0.00 4.55
206 207 2.169352 AGTTCTTCATGACCATCCTCCG 59.831 50.000 0.00 0.00 0.00 4.63
207 208 3.922171 AGTTCTTCATGACCATCCTCC 57.078 47.619 0.00 0.00 0.00 4.30
208 209 5.303971 CCATAGTTCTTCATGACCATCCTC 58.696 45.833 0.00 0.00 0.00 3.71
209 210 4.445448 GCCATAGTTCTTCATGACCATCCT 60.445 45.833 0.00 0.00 0.00 3.24
210 211 3.817647 GCCATAGTTCTTCATGACCATCC 59.182 47.826 0.00 0.00 0.00 3.51
211 212 4.712476 AGCCATAGTTCTTCATGACCATC 58.288 43.478 0.00 0.00 0.00 3.51
212 213 4.164796 TGAGCCATAGTTCTTCATGACCAT 59.835 41.667 0.00 0.00 0.00 3.55
213 214 3.519107 TGAGCCATAGTTCTTCATGACCA 59.481 43.478 0.00 0.00 0.00 4.02
214 215 3.873952 GTGAGCCATAGTTCTTCATGACC 59.126 47.826 0.00 0.00 0.00 4.02
215 216 4.764172 AGTGAGCCATAGTTCTTCATGAC 58.236 43.478 0.00 0.00 0.00 3.06
216 217 6.737720 ATAGTGAGCCATAGTTCTTCATGA 57.262 37.500 0.00 0.00 0.00 3.07
217 218 7.436933 TGTATAGTGAGCCATAGTTCTTCATG 58.563 38.462 0.00 0.00 0.00 3.07
218 219 7.603180 TGTATAGTGAGCCATAGTTCTTCAT 57.397 36.000 0.00 0.00 0.00 2.57
219 220 7.342026 TCTTGTATAGTGAGCCATAGTTCTTCA 59.658 37.037 0.00 0.00 0.00 3.02
220 221 7.717568 TCTTGTATAGTGAGCCATAGTTCTTC 58.282 38.462 0.00 0.00 0.00 2.87
221 222 7.561722 TCTCTTGTATAGTGAGCCATAGTTCTT 59.438 37.037 0.00 0.00 0.00 2.52
222 223 7.063593 TCTCTTGTATAGTGAGCCATAGTTCT 58.936 38.462 0.00 0.00 0.00 3.01
223 224 7.278461 TCTCTTGTATAGTGAGCCATAGTTC 57.722 40.000 0.00 0.00 0.00 3.01
224 225 7.201956 CCTTCTCTTGTATAGTGAGCCATAGTT 60.202 40.741 0.00 0.00 0.00 2.24
225 226 6.266558 CCTTCTCTTGTATAGTGAGCCATAGT 59.733 42.308 0.00 0.00 0.00 2.12
226 227 6.295011 CCCTTCTCTTGTATAGTGAGCCATAG 60.295 46.154 0.00 0.00 0.00 2.23
227 228 5.540337 CCCTTCTCTTGTATAGTGAGCCATA 59.460 44.000 0.00 0.00 0.00 2.74
228 229 4.346418 CCCTTCTCTTGTATAGTGAGCCAT 59.654 45.833 0.00 0.00 0.00 4.40
229 230 3.706594 CCCTTCTCTTGTATAGTGAGCCA 59.293 47.826 0.00 0.00 0.00 4.75
230 231 3.961408 TCCCTTCTCTTGTATAGTGAGCC 59.039 47.826 0.00 0.00 0.00 4.70
231 232 5.361285 TCTTCCCTTCTCTTGTATAGTGAGC 59.639 44.000 0.00 0.00 0.00 4.26
232 233 6.378564 TGTCTTCCCTTCTCTTGTATAGTGAG 59.621 42.308 0.00 0.00 0.00 3.51
233 234 6.253758 TGTCTTCCCTTCTCTTGTATAGTGA 58.746 40.000 0.00 0.00 0.00 3.41
234 235 6.531503 TGTCTTCCCTTCTCTTGTATAGTG 57.468 41.667 0.00 0.00 0.00 2.74
235 236 7.069331 CAGATGTCTTCCCTTCTCTTGTATAGT 59.931 40.741 0.00 0.00 0.00 2.12
236 237 7.069331 ACAGATGTCTTCCCTTCTCTTGTATAG 59.931 40.741 0.00 0.00 0.00 1.31
237 238 6.897966 ACAGATGTCTTCCCTTCTCTTGTATA 59.102 38.462 0.00 0.00 0.00 1.47
238 239 5.723887 ACAGATGTCTTCCCTTCTCTTGTAT 59.276 40.000 0.00 0.00 0.00 2.29
239 240 5.087323 ACAGATGTCTTCCCTTCTCTTGTA 58.913 41.667 0.00 0.00 0.00 2.41
240 241 3.906846 ACAGATGTCTTCCCTTCTCTTGT 59.093 43.478 0.00 0.00 0.00 3.16
241 242 4.550076 ACAGATGTCTTCCCTTCTCTTG 57.450 45.455 0.00 0.00 0.00 3.02
242 243 6.882768 AATACAGATGTCTTCCCTTCTCTT 57.117 37.500 0.00 0.00 0.00 2.85
243 244 6.882768 AAATACAGATGTCTTCCCTTCTCT 57.117 37.500 0.00 0.00 0.00 3.10
244 245 8.261522 AGTAAAATACAGATGTCTTCCCTTCTC 58.738 37.037 0.00 0.00 0.00 2.87
245 246 8.152023 AGTAAAATACAGATGTCTTCCCTTCT 57.848 34.615 0.00 0.00 0.00 2.85
246 247 8.261522 AGAGTAAAATACAGATGTCTTCCCTTC 58.738 37.037 0.00 0.00 0.00 3.46
247 248 8.152023 AGAGTAAAATACAGATGTCTTCCCTT 57.848 34.615 0.00 0.00 0.00 3.95
248 249 7.741554 AGAGTAAAATACAGATGTCTTCCCT 57.258 36.000 0.00 0.00 0.00 4.20
249 250 8.794335 AAAGAGTAAAATACAGATGTCTTCCC 57.206 34.615 0.00 0.00 0.00 3.97
265 266 9.269453 GCTTCTGGTCTAGTTTTAAAGAGTAAA 57.731 33.333 0.00 0.00 0.00 2.01
266 267 8.648693 AGCTTCTGGTCTAGTTTTAAAGAGTAA 58.351 33.333 0.00 0.00 0.00 2.24
267 268 8.191534 AGCTTCTGGTCTAGTTTTAAAGAGTA 57.808 34.615 0.00 0.00 0.00 2.59
268 269 7.068686 AGCTTCTGGTCTAGTTTTAAAGAGT 57.931 36.000 0.00 0.00 0.00 3.24
269 270 6.592220 GGAGCTTCTGGTCTAGTTTTAAAGAG 59.408 42.308 0.00 0.00 40.29 2.85
270 271 6.270231 AGGAGCTTCTGGTCTAGTTTTAAAGA 59.730 38.462 0.00 0.00 40.29 2.52
271 272 6.468543 AGGAGCTTCTGGTCTAGTTTTAAAG 58.531 40.000 0.00 0.00 40.29 1.85
272 273 6.435292 AGGAGCTTCTGGTCTAGTTTTAAA 57.565 37.500 0.00 0.00 40.29 1.52
273 274 6.435292 AAGGAGCTTCTGGTCTAGTTTTAA 57.565 37.500 0.00 0.00 40.29 1.52
274 275 5.336531 CGAAGGAGCTTCTGGTCTAGTTTTA 60.337 44.000 0.00 0.00 38.24 1.52
275 276 4.561734 CGAAGGAGCTTCTGGTCTAGTTTT 60.562 45.833 0.00 0.00 38.24 2.43
276 277 3.056465 CGAAGGAGCTTCTGGTCTAGTTT 60.056 47.826 0.00 0.00 38.24 2.66
277 278 2.494073 CGAAGGAGCTTCTGGTCTAGTT 59.506 50.000 0.00 0.00 38.24 2.24
278 279 2.096248 CGAAGGAGCTTCTGGTCTAGT 58.904 52.381 0.00 0.00 38.24 2.57
279 280 2.861462 CGAAGGAGCTTCTGGTCTAG 57.139 55.000 0.00 0.00 38.24 2.43
305 306 9.567776 TGTGTTTCACATTCTCCTCTTAATTAA 57.432 29.630 0.00 0.00 39.62 1.40
306 307 9.567776 TTGTGTTTCACATTCTCCTCTTAATTA 57.432 29.630 3.43 0.00 44.16 1.40
307 308 8.352942 GTTGTGTTTCACATTCTCCTCTTAATT 58.647 33.333 3.43 0.00 44.16 1.40
308 309 7.502226 TGTTGTGTTTCACATTCTCCTCTTAAT 59.498 33.333 3.43 0.00 44.16 1.40
309 310 6.826231 TGTTGTGTTTCACATTCTCCTCTTAA 59.174 34.615 3.43 0.00 44.16 1.85
310 311 6.353323 TGTTGTGTTTCACATTCTCCTCTTA 58.647 36.000 3.43 0.00 44.16 2.10
311 312 5.192927 TGTTGTGTTTCACATTCTCCTCTT 58.807 37.500 3.43 0.00 44.16 2.85
312 313 4.780815 TGTTGTGTTTCACATTCTCCTCT 58.219 39.130 3.43 0.00 44.16 3.69
313 314 5.615544 CGATGTTGTGTTTCACATTCTCCTC 60.616 44.000 3.43 0.00 44.16 3.71
314 315 4.214119 CGATGTTGTGTTTCACATTCTCCT 59.786 41.667 3.43 0.00 44.16 3.69
315 316 4.466828 CGATGTTGTGTTTCACATTCTCC 58.533 43.478 3.43 0.00 44.16 3.71
316 317 4.213270 TCCGATGTTGTGTTTCACATTCTC 59.787 41.667 3.43 1.20 44.16 2.87
317 318 4.133820 TCCGATGTTGTGTTTCACATTCT 58.866 39.130 3.43 0.00 44.16 2.40
318 319 4.466828 CTCCGATGTTGTGTTTCACATTC 58.533 43.478 3.43 2.09 44.16 2.67
319 320 3.304659 GCTCCGATGTTGTGTTTCACATT 60.305 43.478 3.43 0.00 44.16 2.71
320 321 2.226437 GCTCCGATGTTGTGTTTCACAT 59.774 45.455 3.43 0.00 44.16 3.21
321 322 1.601903 GCTCCGATGTTGTGTTTCACA 59.398 47.619 0.00 0.00 43.02 3.58
322 323 1.069227 GGCTCCGATGTTGTGTTTCAC 60.069 52.381 0.00 0.00 34.56 3.18
323 324 1.234821 GGCTCCGATGTTGTGTTTCA 58.765 50.000 0.00 0.00 0.00 2.69
324 325 0.165944 CGGCTCCGATGTTGTGTTTC 59.834 55.000 1.35 0.00 42.83 2.78
325 326 1.234615 CCGGCTCCGATGTTGTGTTT 61.235 55.000 10.28 0.00 42.83 2.83
326 327 1.671054 CCGGCTCCGATGTTGTGTT 60.671 57.895 10.28 0.00 42.83 3.32
327 328 2.047274 CCGGCTCCGATGTTGTGT 60.047 61.111 10.28 0.00 42.83 3.72
328 329 1.375396 TTCCGGCTCCGATGTTGTG 60.375 57.895 10.28 0.00 42.83 3.33
329 330 1.375523 GTTCCGGCTCCGATGTTGT 60.376 57.895 10.28 0.00 42.83 3.32
330 331 0.673644 AAGTTCCGGCTCCGATGTTG 60.674 55.000 10.28 0.00 42.83 3.33
331 332 0.673644 CAAGTTCCGGCTCCGATGTT 60.674 55.000 10.28 0.00 42.83 2.71
332 333 1.079127 CAAGTTCCGGCTCCGATGT 60.079 57.895 10.28 0.00 42.83 3.06
333 334 0.391130 TTCAAGTTCCGGCTCCGATG 60.391 55.000 10.28 1.50 42.83 3.84
334 335 0.391263 GTTCAAGTTCCGGCTCCGAT 60.391 55.000 10.28 0.00 42.83 4.18
335 336 1.005394 GTTCAAGTTCCGGCTCCGA 60.005 57.895 10.28 0.00 42.83 4.55
336 337 1.301401 TGTTCAAGTTCCGGCTCCG 60.301 57.895 0.00 0.48 39.44 4.63
337 338 1.566018 CGTGTTCAAGTTCCGGCTCC 61.566 60.000 0.00 0.00 0.00 4.70
338 339 1.860078 CGTGTTCAAGTTCCGGCTC 59.140 57.895 0.00 0.00 0.00 4.70
339 340 2.251642 GCGTGTTCAAGTTCCGGCT 61.252 57.895 0.00 0.00 0.00 5.52
340 341 1.852067 ATGCGTGTTCAAGTTCCGGC 61.852 55.000 0.00 0.00 0.00 6.13
341 342 1.393539 CTATGCGTGTTCAAGTTCCGG 59.606 52.381 0.00 0.00 0.00 5.14
342 343 1.393539 CCTATGCGTGTTCAAGTTCCG 59.606 52.381 0.00 0.00 0.00 4.30
343 344 1.130561 GCCTATGCGTGTTCAAGTTCC 59.869 52.381 0.00 0.00 0.00 3.62
344 345 2.076863 AGCCTATGCGTGTTCAAGTTC 58.923 47.619 0.00 0.00 44.33 3.01
345 346 2.185004 AGCCTATGCGTGTTCAAGTT 57.815 45.000 0.00 0.00 44.33 2.66
346 347 2.418746 CCTAGCCTATGCGTGTTCAAGT 60.419 50.000 0.00 0.00 44.33 3.16
347 348 2.159099 TCCTAGCCTATGCGTGTTCAAG 60.159 50.000 0.00 0.00 44.33 3.02
348 349 1.828595 TCCTAGCCTATGCGTGTTCAA 59.171 47.619 0.00 0.00 44.33 2.69
349 350 1.409064 CTCCTAGCCTATGCGTGTTCA 59.591 52.381 0.00 0.00 44.33 3.18
350 351 1.681793 TCTCCTAGCCTATGCGTGTTC 59.318 52.381 0.00 0.00 44.33 3.18
351 352 1.409427 GTCTCCTAGCCTATGCGTGTT 59.591 52.381 0.00 0.00 44.33 3.32
352 353 1.033574 GTCTCCTAGCCTATGCGTGT 58.966 55.000 0.00 0.00 44.33 4.49
353 354 1.032794 TGTCTCCTAGCCTATGCGTG 58.967 55.000 0.00 0.00 44.33 5.34
354 355 1.033574 GTGTCTCCTAGCCTATGCGT 58.966 55.000 0.00 0.00 44.33 5.24
355 356 1.032794 TGTGTCTCCTAGCCTATGCG 58.967 55.000 0.00 0.00 44.33 4.73
356 357 2.432510 AGTTGTGTCTCCTAGCCTATGC 59.567 50.000 0.00 0.00 37.95 3.14
357 358 3.449018 ACAGTTGTGTCTCCTAGCCTATG 59.551 47.826 0.00 0.00 26.76 2.23
358 359 3.714144 ACAGTTGTGTCTCCTAGCCTAT 58.286 45.455 0.00 0.00 26.76 2.57
359 360 3.170991 ACAGTTGTGTCTCCTAGCCTA 57.829 47.619 0.00 0.00 26.76 3.93
360 361 2.016905 ACAGTTGTGTCTCCTAGCCT 57.983 50.000 0.00 0.00 26.76 4.58
361 362 4.473477 AATACAGTTGTGTCTCCTAGCC 57.527 45.455 0.00 0.00 38.19 3.93
362 363 5.349809 GGTAATACAGTTGTGTCTCCTAGC 58.650 45.833 0.00 0.00 38.19 3.42
363 364 5.163437 GGGGTAATACAGTTGTGTCTCCTAG 60.163 48.000 0.00 0.00 38.19 3.02
364 365 4.713321 GGGGTAATACAGTTGTGTCTCCTA 59.287 45.833 0.00 0.00 38.19 2.94
365 366 3.518303 GGGGTAATACAGTTGTGTCTCCT 59.482 47.826 0.00 0.00 38.19 3.69
366 367 3.370209 GGGGGTAATACAGTTGTGTCTCC 60.370 52.174 0.00 0.00 38.19 3.71
367 368 3.677976 CGGGGGTAATACAGTTGTGTCTC 60.678 52.174 0.00 0.00 38.19 3.36
368 369 2.235402 CGGGGGTAATACAGTTGTGTCT 59.765 50.000 0.00 0.00 38.19 3.41
369 370 2.624636 CGGGGGTAATACAGTTGTGTC 58.375 52.381 0.00 0.00 38.19 3.67
370 371 1.339342 GCGGGGGTAATACAGTTGTGT 60.339 52.381 0.00 0.00 41.06 3.72
371 372 1.339247 TGCGGGGGTAATACAGTTGTG 60.339 52.381 0.00 0.00 0.00 3.33
372 373 0.985760 TGCGGGGGTAATACAGTTGT 59.014 50.000 0.00 0.00 0.00 3.32
373 374 2.116827 TTGCGGGGGTAATACAGTTG 57.883 50.000 0.00 0.00 0.00 3.16
374 375 2.883122 TTTGCGGGGGTAATACAGTT 57.117 45.000 0.00 0.00 0.00 3.16
375 376 2.883122 TTTTGCGGGGGTAATACAGT 57.117 45.000 0.00 0.00 0.00 3.55
394 395 7.339466 AGTGAAATACAGTTGTGTCTCCTTTTT 59.661 33.333 0.00 0.00 38.19 1.94
395 396 6.828785 AGTGAAATACAGTTGTGTCTCCTTTT 59.171 34.615 0.00 0.00 38.19 2.27
396 397 6.357367 AGTGAAATACAGTTGTGTCTCCTTT 58.643 36.000 0.00 0.00 38.19 3.11
397 398 5.930135 AGTGAAATACAGTTGTGTCTCCTT 58.070 37.500 0.00 0.00 38.19 3.36
398 399 5.070446 TGAGTGAAATACAGTTGTGTCTCCT 59.930 40.000 0.00 0.00 38.19 3.69
399 400 5.297547 TGAGTGAAATACAGTTGTGTCTCC 58.702 41.667 0.00 0.00 38.19 3.71
400 401 7.598869 TGTATGAGTGAAATACAGTTGTGTCTC 59.401 37.037 0.00 0.00 35.97 3.36
401 402 7.385205 GTGTATGAGTGAAATACAGTTGTGTCT 59.615 37.037 0.00 0.00 40.30 3.41
402 403 7.385205 AGTGTATGAGTGAAATACAGTTGTGTC 59.615 37.037 0.00 0.00 39.89 3.67
403 404 7.217200 AGTGTATGAGTGAAATACAGTTGTGT 58.783 34.615 0.00 0.00 39.89 3.72
404 405 7.658179 AGTGTATGAGTGAAATACAGTTGTG 57.342 36.000 0.00 0.00 39.89 3.33
405 406 7.116376 CGAAGTGTATGAGTGAAATACAGTTGT 59.884 37.037 17.10 0.14 46.64 3.32
406 407 7.328493 TCGAAGTGTATGAGTGAAATACAGTTG 59.672 37.037 17.10 11.38 46.64 3.16
408 409 6.920817 TCGAAGTGTATGAGTGAAATACAGT 58.079 36.000 0.00 0.00 43.03 3.55
409 410 7.993821 ATCGAAGTGTATGAGTGAAATACAG 57.006 36.000 0.00 0.00 40.30 2.74
435 436 9.783081 AGATGCCAAAGAACTTTCAAATTTTAT 57.217 25.926 0.00 0.00 0.00 1.40
436 437 9.044150 CAGATGCCAAAGAACTTTCAAATTTTA 57.956 29.630 0.00 0.00 0.00 1.52
437 438 7.467675 GCAGATGCCAAAGAACTTTCAAATTTT 60.468 33.333 0.00 0.00 34.31 1.82
438 439 6.017687 GCAGATGCCAAAGAACTTTCAAATTT 60.018 34.615 0.00 0.00 34.31 1.82
439 440 5.467735 GCAGATGCCAAAGAACTTTCAAATT 59.532 36.000 0.00 0.00 34.31 1.82
440 441 4.992951 GCAGATGCCAAAGAACTTTCAAAT 59.007 37.500 0.00 0.00 34.31 2.32
441 442 4.099881 AGCAGATGCCAAAGAACTTTCAAA 59.900 37.500 0.14 0.00 43.38 2.69
442 443 3.638160 AGCAGATGCCAAAGAACTTTCAA 59.362 39.130 0.14 0.00 43.38 2.69
443 444 3.225104 AGCAGATGCCAAAGAACTTTCA 58.775 40.909 0.14 0.00 43.38 2.69
444 445 3.366781 GGAGCAGATGCCAAAGAACTTTC 60.367 47.826 0.14 0.00 43.38 2.62
445 446 2.560105 GGAGCAGATGCCAAAGAACTTT 59.440 45.455 0.14 0.00 43.38 2.66
446 447 2.165998 GGAGCAGATGCCAAAGAACTT 58.834 47.619 0.14 0.00 43.38 2.66
447 448 1.615384 GGGAGCAGATGCCAAAGAACT 60.615 52.381 0.14 0.00 43.38 3.01
448 449 0.813821 GGGAGCAGATGCCAAAGAAC 59.186 55.000 0.14 0.00 43.38 3.01
449 450 0.700564 AGGGAGCAGATGCCAAAGAA 59.299 50.000 0.00 0.00 43.31 2.52
450 451 0.254178 GAGGGAGCAGATGCCAAAGA 59.746 55.000 0.00 0.00 43.31 2.52
451 452 0.750911 GGAGGGAGCAGATGCCAAAG 60.751 60.000 0.00 0.00 43.31 2.77
452 453 1.210204 AGGAGGGAGCAGATGCCAAA 61.210 55.000 0.00 0.00 43.31 3.28
453 454 1.210204 AAGGAGGGAGCAGATGCCAA 61.210 55.000 0.00 0.00 43.31 4.52
454 455 1.617536 AAGGAGGGAGCAGATGCCA 60.618 57.895 0.00 0.00 43.31 4.92
455 456 1.148048 GAAGGAGGGAGCAGATGCC 59.852 63.158 0.14 0.00 43.38 4.40
456 457 1.148048 GGAAGGAGGGAGCAGATGC 59.852 63.158 0.00 0.00 42.49 3.91
457 458 1.835693 GGGAAGGAGGGAGCAGATG 59.164 63.158 0.00 0.00 0.00 2.90
458 459 1.764054 CGGGAAGGAGGGAGCAGAT 60.764 63.158 0.00 0.00 0.00 2.90
459 460 2.364317 CGGGAAGGAGGGAGCAGA 60.364 66.667 0.00 0.00 0.00 4.26
460 461 3.474570 CCGGGAAGGAGGGAGCAG 61.475 72.222 0.00 0.00 45.00 4.24
461 462 3.864983 AACCGGGAAGGAGGGAGCA 62.865 63.158 6.32 0.00 45.00 4.26
462 463 1.269703 TAAACCGGGAAGGAGGGAGC 61.270 60.000 6.32 0.00 45.00 4.70
463 464 1.508256 ATAAACCGGGAAGGAGGGAG 58.492 55.000 6.32 0.00 45.00 4.30
464 465 2.686119 CTATAAACCGGGAAGGAGGGA 58.314 52.381 6.32 0.00 45.00 4.20
465 466 1.697982 CCTATAAACCGGGAAGGAGGG 59.302 57.143 6.32 0.00 45.00 4.30
466 467 1.697982 CCCTATAAACCGGGAAGGAGG 59.302 57.143 6.32 6.70 43.44 4.30
467 468 1.071857 GCCCTATAAACCGGGAAGGAG 59.928 57.143 6.32 0.00 43.44 3.69
468 469 1.134228 GCCCTATAAACCGGGAAGGA 58.866 55.000 6.32 0.00 43.44 3.36
469 470 1.137697 AGCCCTATAAACCGGGAAGG 58.862 55.000 6.32 4.57 43.44 3.46
470 471 4.286291 AGATAAGCCCTATAAACCGGGAAG 59.714 45.833 6.32 0.00 43.44 3.46
471 472 4.237018 AGATAAGCCCTATAAACCGGGAA 58.763 43.478 6.32 0.00 43.44 3.97
472 473 3.836562 GAGATAAGCCCTATAAACCGGGA 59.163 47.826 6.32 0.00 43.44 5.14
473 474 3.581332 TGAGATAAGCCCTATAAACCGGG 59.419 47.826 6.32 0.00 43.60 5.73
474 475 4.884668 TGAGATAAGCCCTATAAACCGG 57.115 45.455 0.00 0.00 0.00 5.28
475 476 7.562454 TTTTTGAGATAAGCCCTATAAACCG 57.438 36.000 0.00 0.00 0.00 4.44
479 480 9.621629 TCGAAATTTTTGAGATAAGCCCTATAA 57.378 29.630 0.00 0.00 0.00 0.98
480 481 9.793259 ATCGAAATTTTTGAGATAAGCCCTATA 57.207 29.630 5.37 0.00 0.00 1.31
481 482 8.697507 ATCGAAATTTTTGAGATAAGCCCTAT 57.302 30.769 5.37 0.00 0.00 2.57
482 483 8.519799 AATCGAAATTTTTGAGATAAGCCCTA 57.480 30.769 5.37 0.00 0.00 3.53
483 484 7.410120 AATCGAAATTTTTGAGATAAGCCCT 57.590 32.000 5.37 0.00 0.00 5.19
484 485 7.222805 GGAAATCGAAATTTTTGAGATAAGCCC 59.777 37.037 5.37 0.00 35.21 5.19
485 486 7.222805 GGGAAATCGAAATTTTTGAGATAAGCC 59.777 37.037 5.37 1.77 35.21 4.35
486 487 7.044052 CGGGAAATCGAAATTTTTGAGATAAGC 60.044 37.037 5.37 0.00 35.21 3.09
487 488 7.968405 ACGGGAAATCGAAATTTTTGAGATAAG 59.032 33.333 5.37 0.00 35.21 1.73
488 489 7.822658 ACGGGAAATCGAAATTTTTGAGATAA 58.177 30.769 5.37 0.00 35.21 1.75
489 490 7.385778 ACGGGAAATCGAAATTTTTGAGATA 57.614 32.000 5.37 0.00 35.21 1.98
490 491 6.267496 ACGGGAAATCGAAATTTTTGAGAT 57.733 33.333 5.37 0.00 35.21 2.75
491 492 5.699097 ACGGGAAATCGAAATTTTTGAGA 57.301 34.783 5.37 0.00 35.21 3.27
492 493 6.763303 AAACGGGAAATCGAAATTTTTGAG 57.237 33.333 5.37 0.00 35.21 3.02
493 494 8.819643 ATAAAACGGGAAATCGAAATTTTTGA 57.180 26.923 1.58 1.58 35.21 2.69
496 497 9.917129 ACTTATAAAACGGGAAATCGAAATTTT 57.083 25.926 0.00 0.00 35.21 1.82
497 498 9.563898 GACTTATAAAACGGGAAATCGAAATTT 57.436 29.630 0.00 0.00 37.80 1.82
498 499 8.953313 AGACTTATAAAACGGGAAATCGAAATT 58.047 29.630 0.00 0.00 0.00 1.82
499 500 8.502105 AGACTTATAAAACGGGAAATCGAAAT 57.498 30.769 0.00 0.00 0.00 2.17
500 501 7.603404 TGAGACTTATAAAACGGGAAATCGAAA 59.397 33.333 0.00 0.00 0.00 3.46
501 502 7.098477 TGAGACTTATAAAACGGGAAATCGAA 58.902 34.615 0.00 0.00 0.00 3.71
502 503 6.632909 TGAGACTTATAAAACGGGAAATCGA 58.367 36.000 0.00 0.00 0.00 3.59
503 504 6.897259 TGAGACTTATAAAACGGGAAATCG 57.103 37.500 0.00 0.00 0.00 3.34
505 506 9.855021 CAAATTGAGACTTATAAAACGGGAAAT 57.145 29.630 0.00 0.00 0.00 2.17
506 507 9.069082 TCAAATTGAGACTTATAAAACGGGAAA 57.931 29.630 0.00 0.00 0.00 3.13
507 508 8.624367 TCAAATTGAGACTTATAAAACGGGAA 57.376 30.769 0.00 0.00 0.00 3.97
508 509 8.801882 ATCAAATTGAGACTTATAAAACGGGA 57.198 30.769 1.10 0.00 0.00 5.14
509 510 9.289303 CAATCAAATTGAGACTTATAAAACGGG 57.711 33.333 1.10 0.00 42.83 5.28
510 511 9.840427 ACAATCAAATTGAGACTTATAAAACGG 57.160 29.630 1.10 0.00 42.83 4.44
515 516 8.966868 GGGGAACAATCAAATTGAGACTTATAA 58.033 33.333 1.10 0.00 42.83 0.98
516 517 8.112822 TGGGGAACAATCAAATTGAGACTTATA 58.887 33.333 1.10 0.00 42.83 0.98
517 518 6.953520 TGGGGAACAATCAAATTGAGACTTAT 59.046 34.615 1.10 0.00 42.83 1.73
518 519 6.310941 TGGGGAACAATCAAATTGAGACTTA 58.689 36.000 1.10 0.00 42.83 2.24
519 520 5.147032 TGGGGAACAATCAAATTGAGACTT 58.853 37.500 1.10 0.00 42.83 3.01
520 521 4.739793 TGGGGAACAATCAAATTGAGACT 58.260 39.130 1.10 0.00 42.83 3.24
521 522 5.185635 TGATGGGGAACAATCAAATTGAGAC 59.814 40.000 1.10 0.00 42.83 3.36
522 523 5.185635 GTGATGGGGAACAATCAAATTGAGA 59.814 40.000 1.10 0.00 42.83 3.27
523 524 5.047164 TGTGATGGGGAACAATCAAATTGAG 60.047 40.000 1.10 0.00 42.83 3.02
524 525 4.837298 TGTGATGGGGAACAATCAAATTGA 59.163 37.500 0.00 0.00 42.83 2.57
525 526 5.149973 TGTGATGGGGAACAATCAAATTG 57.850 39.130 0.00 0.00 45.59 2.32
526 527 5.736813 CATGTGATGGGGAACAATCAAATT 58.263 37.500 0.00 0.00 0.00 1.82
527 528 4.383335 GCATGTGATGGGGAACAATCAAAT 60.383 41.667 0.00 0.00 0.00 2.32
528 529 3.055963 GCATGTGATGGGGAACAATCAAA 60.056 43.478 0.00 0.00 0.00 2.69
529 530 2.496871 GCATGTGATGGGGAACAATCAA 59.503 45.455 0.00 0.00 0.00 2.57
530 531 2.101783 GCATGTGATGGGGAACAATCA 58.898 47.619 0.00 0.00 0.00 2.57
531 532 2.360165 GAGCATGTGATGGGGAACAATC 59.640 50.000 0.00 0.00 0.00 2.67
532 533 2.291735 TGAGCATGTGATGGGGAACAAT 60.292 45.455 0.00 0.00 0.00 2.71
533 534 1.075212 TGAGCATGTGATGGGGAACAA 59.925 47.619 0.00 0.00 0.00 2.83
534 535 0.697658 TGAGCATGTGATGGGGAACA 59.302 50.000 0.00 0.00 0.00 3.18
535 536 1.065199 TCTGAGCATGTGATGGGGAAC 60.065 52.381 0.00 0.00 0.00 3.62
536 537 1.288188 TCTGAGCATGTGATGGGGAA 58.712 50.000 0.00 0.00 0.00 3.97
537 538 1.514983 ATCTGAGCATGTGATGGGGA 58.485 50.000 0.00 0.00 0.00 4.81
538 539 2.359981 AATCTGAGCATGTGATGGGG 57.640 50.000 0.00 0.00 0.00 4.96
539 540 5.840243 TTAAAATCTGAGCATGTGATGGG 57.160 39.130 0.00 0.00 0.00 4.00
540 541 7.254319 GCAATTTAAAATCTGAGCATGTGATGG 60.254 37.037 0.00 0.00 0.00 3.51
541 542 7.276878 TGCAATTTAAAATCTGAGCATGTGATG 59.723 33.333 0.00 0.00 0.00 3.07
542 543 7.324935 TGCAATTTAAAATCTGAGCATGTGAT 58.675 30.769 0.00 0.00 0.00 3.06
543 544 6.689554 TGCAATTTAAAATCTGAGCATGTGA 58.310 32.000 0.00 0.00 0.00 3.58
544 545 6.954616 TGCAATTTAAAATCTGAGCATGTG 57.045 33.333 0.00 0.00 0.00 3.21
545 546 9.656040 TTAATGCAATTTAAAATCTGAGCATGT 57.344 25.926 0.00 0.00 40.86 3.21
575 576 8.757982 AGTTTCTCATAATCCTTGCATGTAAT 57.242 30.769 0.00 0.00 0.00 1.89
576 577 8.461222 CAAGTTTCTCATAATCCTTGCATGTAA 58.539 33.333 0.00 0.00 0.00 2.41
577 578 7.828717 TCAAGTTTCTCATAATCCTTGCATGTA 59.171 33.333 0.00 0.00 31.64 2.29
578 579 6.660521 TCAAGTTTCTCATAATCCTTGCATGT 59.339 34.615 0.00 0.00 31.64 3.21
579 580 6.971184 GTCAAGTTTCTCATAATCCTTGCATG 59.029 38.462 0.00 0.00 31.64 4.06
580 581 6.096001 GGTCAAGTTTCTCATAATCCTTGCAT 59.904 38.462 0.00 0.00 31.64 3.96
581 582 5.415701 GGTCAAGTTTCTCATAATCCTTGCA 59.584 40.000 0.00 0.00 31.64 4.08
582 583 5.415701 TGGTCAAGTTTCTCATAATCCTTGC 59.584 40.000 0.00 0.00 31.64 4.01
583 584 7.452880 TTGGTCAAGTTTCTCATAATCCTTG 57.547 36.000 0.00 0.00 0.00 3.61
584 585 7.363268 GCATTGGTCAAGTTTCTCATAATCCTT 60.363 37.037 0.00 0.00 0.00 3.36
585 586 6.096001 GCATTGGTCAAGTTTCTCATAATCCT 59.904 38.462 0.00 0.00 0.00 3.24
586 587 6.127647 TGCATTGGTCAAGTTTCTCATAATCC 60.128 38.462 0.00 0.00 0.00 3.01
587 588 6.855836 TGCATTGGTCAAGTTTCTCATAATC 58.144 36.000 0.00 0.00 0.00 1.75
588 589 6.839124 TGCATTGGTCAAGTTTCTCATAAT 57.161 33.333 0.00 0.00 0.00 1.28
589 590 6.839124 ATGCATTGGTCAAGTTTCTCATAA 57.161 33.333 0.00 0.00 0.00 1.90
590 591 9.625747 TTATATGCATTGGTCAAGTTTCTCATA 57.374 29.630 3.54 0.00 0.00 2.15
591 592 8.523915 TTATATGCATTGGTCAAGTTTCTCAT 57.476 30.769 3.54 0.00 0.00 2.90
592 593 7.936496 TTATATGCATTGGTCAAGTTTCTCA 57.064 32.000 3.54 0.00 0.00 3.27
593 594 9.455847 GAATTATATGCATTGGTCAAGTTTCTC 57.544 33.333 3.54 0.00 0.00 2.87
594 595 8.970020 TGAATTATATGCATTGGTCAAGTTTCT 58.030 29.630 3.54 0.00 0.00 2.52
595 596 9.754382 ATGAATTATATGCATTGGTCAAGTTTC 57.246 29.630 3.54 0.00 0.00 2.78
596 597 9.537192 CATGAATTATATGCATTGGTCAAGTTT 57.463 29.630 3.54 0.00 0.00 2.66
612 613 9.737844 TGCTATTTACTCCATGCATGAATTATA 57.262 29.630 28.31 14.65 0.00 0.98
613 614 8.640063 TGCTATTTACTCCATGCATGAATTAT 57.360 30.769 28.31 14.33 0.00 1.28
614 615 8.462589 TTGCTATTTACTCCATGCATGAATTA 57.537 30.769 28.31 11.99 0.00 1.40
615 616 6.964807 TGCTATTTACTCCATGCATGAATT 57.035 33.333 28.31 12.98 0.00 2.17
616 617 6.964807 TTGCTATTTACTCCATGCATGAAT 57.035 33.333 28.31 19.58 0.00 2.57
617 618 6.772360 TTTGCTATTTACTCCATGCATGAA 57.228 33.333 28.31 13.90 0.00 2.57
618 619 6.772360 TTTTGCTATTTACTCCATGCATGA 57.228 33.333 28.31 12.81 0.00 3.07
773 777 1.374947 CATGTGGGTCCAGACGGTT 59.625 57.895 0.00 0.00 0.00 4.44
899 943 3.386237 GGGGAGTGAGCGAGCAGT 61.386 66.667 0.00 0.00 0.00 4.40
980 1041 3.744719 CGGCAAGGAGGTCGACGA 61.745 66.667 9.92 0.00 38.35 4.20
1020 1081 1.316706 CCTCCTCCGAGCTCGTTTCT 61.317 60.000 32.41 0.00 37.74 2.52
1695 1798 7.001073 GGACTAGGAGCTTATTTCAATTCCAT 58.999 38.462 0.00 0.00 0.00 3.41
1696 1799 6.069673 TGGACTAGGAGCTTATTTCAATTCCA 60.070 38.462 0.00 0.00 0.00 3.53
1697 1800 6.357367 TGGACTAGGAGCTTATTTCAATTCC 58.643 40.000 0.00 0.00 0.00 3.01
1698 1801 8.457238 AATGGACTAGGAGCTTATTTCAATTC 57.543 34.615 0.00 0.00 0.00 2.17
1699 1802 8.689972 CAAATGGACTAGGAGCTTATTTCAATT 58.310 33.333 0.00 0.00 0.00 2.32
1700 1803 7.836183 ACAAATGGACTAGGAGCTTATTTCAAT 59.164 33.333 0.00 0.00 0.00 2.57
1701 1804 7.175104 ACAAATGGACTAGGAGCTTATTTCAA 58.825 34.615 0.00 0.00 0.00 2.69
1702 1805 6.721318 ACAAATGGACTAGGAGCTTATTTCA 58.279 36.000 0.00 0.00 0.00 2.69
1703 1806 8.732746 TTACAAATGGACTAGGAGCTTATTTC 57.267 34.615 0.00 0.00 0.00 2.17
1706 1809 9.780186 GTTATTACAAATGGACTAGGAGCTTAT 57.220 33.333 0.00 0.00 0.00 1.73
1707 1810 8.989131 AGTTATTACAAATGGACTAGGAGCTTA 58.011 33.333 0.00 0.00 0.00 3.09
1708 1811 7.862675 AGTTATTACAAATGGACTAGGAGCTT 58.137 34.615 0.00 0.00 0.00 3.74
1709 1812 7.439108 AGTTATTACAAATGGACTAGGAGCT 57.561 36.000 0.00 0.00 0.00 4.09
1710 1813 9.780186 ATAAGTTATTACAAATGGACTAGGAGC 57.220 33.333 0.00 0.00 0.00 4.70
1748 1851 8.854117 GGACTATGAGCTTATTTCAATTCCATT 58.146 33.333 0.00 0.00 0.00 3.16
1860 2017 4.639755 TGCACAAACATCTCTGAAGAACAA 59.360 37.500 0.00 0.00 34.49 2.83
1939 2099 2.586425 CTGGCCAACTCCTTCTCAAAA 58.414 47.619 7.01 0.00 0.00 2.44
2004 2164 4.748102 ACTCAATGCAAAGCTTGTCATTTG 59.252 37.500 18.39 16.35 36.20 2.32
2093 2253 4.798882 TCCTCCACTTGTTTTTGGTACAT 58.201 39.130 0.00 0.00 39.30 2.29
2101 2261 4.079730 AGTTCTTCCTCCTCCACTTGTTTT 60.080 41.667 0.00 0.00 0.00 2.43
2134 2294 5.793817 AGCTCCTTCTTCTTCTTCTTCTTC 58.206 41.667 0.00 0.00 0.00 2.87
2135 2295 5.823861 AGCTCCTTCTTCTTCTTCTTCTT 57.176 39.130 0.00 0.00 0.00 2.52
2136 2296 6.252995 TCTAGCTCCTTCTTCTTCTTCTTCT 58.747 40.000 0.00 0.00 0.00 2.85
2137 2297 6.405842 CCTCTAGCTCCTTCTTCTTCTTCTTC 60.406 46.154 0.00 0.00 0.00 2.87
2138 2298 5.422012 CCTCTAGCTCCTTCTTCTTCTTCTT 59.578 44.000 0.00 0.00 0.00 2.52
2139 2299 4.956075 CCTCTAGCTCCTTCTTCTTCTTCT 59.044 45.833 0.00 0.00 0.00 2.85
2140 2300 4.953579 TCCTCTAGCTCCTTCTTCTTCTTC 59.046 45.833 0.00 0.00 0.00 2.87
2141 2301 4.941713 TCCTCTAGCTCCTTCTTCTTCTT 58.058 43.478 0.00 0.00 0.00 2.52
2142 2302 4.229582 TCTCCTCTAGCTCCTTCTTCTTCT 59.770 45.833 0.00 0.00 0.00 2.85
2143 2303 4.532834 TCTCCTCTAGCTCCTTCTTCTTC 58.467 47.826 0.00 0.00 0.00 2.87
2144 2304 4.601406 TCTCCTCTAGCTCCTTCTTCTT 57.399 45.455 0.00 0.00 0.00 2.52
2145 2305 4.601406 TTCTCCTCTAGCTCCTTCTTCT 57.399 45.455 0.00 0.00 0.00 2.85
2279 2448 8.964476 TTCTTAAGAACATCTCTGTCAACTTT 57.036 30.769 13.99 0.00 33.36 2.66
2339 2508 2.224992 TGCCATACCCTTCTTTCAGCAA 60.225 45.455 0.00 0.00 0.00 3.91
2950 3227 0.614415 CTCCTCCTCCTCTGTGCTGT 60.614 60.000 0.00 0.00 0.00 4.40
2958 3244 0.996762 TCCTCCTCCTCCTCCTCCTC 60.997 65.000 0.00 0.00 0.00 3.71
2959 3245 0.998945 CTCCTCCTCCTCCTCCTCCT 60.999 65.000 0.00 0.00 0.00 3.69
2960 3246 1.541672 CTCCTCCTCCTCCTCCTCC 59.458 68.421 0.00 0.00 0.00 4.30
2961 3247 0.996762 TCCTCCTCCTCCTCCTCCTC 60.997 65.000 0.00 0.00 0.00 3.71
2962 3248 0.998945 CTCCTCCTCCTCCTCCTCCT 60.999 65.000 0.00 0.00 0.00 3.69
2963 3249 1.541672 CTCCTCCTCCTCCTCCTCC 59.458 68.421 0.00 0.00 0.00 4.30
2964 3250 0.996762 TCCTCCTCCTCCTCCTCCTC 60.997 65.000 0.00 0.00 0.00 3.71
2965 3251 0.998945 CTCCTCCTCCTCCTCCTCCT 60.999 65.000 0.00 0.00 0.00 3.69
2966 3252 1.541672 CTCCTCCTCCTCCTCCTCC 59.458 68.421 0.00 0.00 0.00 4.30
2967 3253 0.996762 TCCTCCTCCTCCTCCTCCTC 60.997 65.000 0.00 0.00 0.00 3.71
2968 3254 0.998945 CTCCTCCTCCTCCTCCTCCT 60.999 65.000 0.00 0.00 0.00 3.69
2969 3255 1.541672 CTCCTCCTCCTCCTCCTCC 59.458 68.421 0.00 0.00 0.00 4.30
3001 3296 3.077556 CTGGGCCGCCTCTAGTGT 61.078 66.667 9.86 0.00 0.00 3.55
3295 3601 7.966246 AGAGTAGATCTTACATAGTACACCG 57.034 40.000 0.00 0.00 32.99 4.94
3379 3685 8.162878 CCACTGCATAATTTCATTGAGAGTAT 57.837 34.615 0.00 0.00 0.00 2.12


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.