Multiple sequence alignment - TraesCS4D01G216400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G216400 chr4D 100.000 5247 0 0 1449 6695 370537963 370532717 0.000000e+00 9690
1 TraesCS4D01G216400 chr4D 100.000 1098 0 0 1 1098 370539411 370538314 0.000000e+00 2028
2 TraesCS4D01G216400 chr4B 96.843 3484 95 10 2805 6284 455621445 455617973 0.000000e+00 5810
3 TraesCS4D01G216400 chr4B 97.889 1374 27 2 1451 2823 455623004 455621632 0.000000e+00 2375
4 TraesCS4D01G216400 chr4B 95.296 574 23 4 527 1098 455623994 455623423 0.000000e+00 907
5 TraesCS4D01G216400 chr4B 90.414 532 23 3 3 511 455624505 455623979 0.000000e+00 675
6 TraesCS4D01G216400 chr4A 94.034 2883 128 29 1449 4308 93891074 93893935 0.000000e+00 4331
7 TraesCS4D01G216400 chr4A 92.377 2007 104 26 4307 6284 93894203 93896189 0.000000e+00 2813
8 TraesCS4D01G216400 chr4A 94.759 477 14 6 631 1098 93890519 93890993 0.000000e+00 732
9 TraesCS4D01G216400 chr4A 85.455 440 38 8 98 511 93889935 93890374 1.030000e-117 435
10 TraesCS4D01G216400 chr4A 92.623 122 8 1 527 648 93890359 93890479 2.480000e-39 174
11 TraesCS4D01G216400 chr6D 91.714 350 26 2 6322 6668 41159215 41159564 3.630000e-132 483
12 TraesCS4D01G216400 chr5A 91.908 346 27 1 6322 6666 701968847 701968502 3.630000e-132 483
13 TraesCS4D01G216400 chr5A 89.714 350 34 2 6322 6670 297712992 297712644 4.760000e-121 446
14 TraesCS4D01G216400 chr5A 92.258 155 12 0 1897 2051 675407659 675407505 3.140000e-53 220
15 TraesCS4D01G216400 chr7D 91.667 348 27 2 6322 6668 53333422 53333768 1.310000e-131 481
16 TraesCS4D01G216400 chr3D 91.667 348 28 1 6322 6668 505421087 505420740 1.310000e-131 481
17 TraesCS4D01G216400 chr2D 91.168 351 31 0 6321 6671 21060543 21060193 1.690000e-130 477
18 TraesCS4D01G216400 chr7A 90.778 347 30 2 6323 6668 710728569 710728224 4.730000e-126 462
19 TraesCS4D01G216400 chr6A 89.744 351 32 3 6322 6669 64265123 64264774 4.760000e-121 446
20 TraesCS4D01G216400 chr2A 88.761 347 38 1 6322 6668 615744264 615743919 2.230000e-114 424


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G216400 chr4D 370532717 370539411 6694 True 5859.00 9690 100.0000 1 6695 2 chr4D.!!$R1 6694
1 TraesCS4D01G216400 chr4B 455617973 455624505 6532 True 2441.75 5810 95.1105 3 6284 4 chr4B.!!$R1 6281
2 TraesCS4D01G216400 chr4A 93889935 93896189 6254 False 1697.00 4331 91.8496 98 6284 5 chr4A.!!$F1 6186

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
923 1014 0.110486 GAGCCTTTGACTTCCACCCA 59.890 55.0 0.00 0.0 0.00 4.51 F
1683 1842 0.960364 TTCGAGCTGGGGTTCAATGC 60.960 55.0 0.00 0.0 0.00 3.56 F
1769 1954 0.169672 AACTTGCATGATCAGTGCGC 59.830 50.0 18.79 0.0 45.37 6.09 F
2786 2975 0.538057 CGGCCCTGATGCATAATGGT 60.538 55.0 0.00 0.0 0.00 3.55 F
3949 4348 0.897621 GAAGCCATTTGGGACCCAAG 59.102 55.0 24.95 15.4 44.84 3.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1769 1954 1.135721 GTACACACTTAGGTAGGGGCG 59.864 57.143 0.00 0.0 0.00 6.13 R
3611 4007 1.202710 TGCAGTAACACAACATCCGGT 60.203 47.619 0.00 0.0 0.00 5.28 R
3693 4089 1.264557 CTCTACGGCCTACTCATCACG 59.735 57.143 0.00 0.0 0.00 4.35 R
4771 5443 1.384525 ACAGGCGTGTTTTGTAAGCA 58.615 45.000 6.15 0.0 30.30 3.91 R
5760 6453 0.539986 GGCCCCTTATCACGTCTTGA 59.460 55.000 0.00 0.0 39.11 3.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
39 40 0.680921 TGCAGCTTAGCATTGGTCCC 60.681 55.000 7.07 0.00 40.11 4.46
243 245 0.179145 GATGAGTGGTGGTACGTCGG 60.179 60.000 0.00 0.00 0.00 4.79
312 337 5.010922 AGCAACATTGAGAACATTTGCCTTA 59.989 36.000 0.00 0.00 37.35 2.69
338 363 3.650942 TGTGTAGATGGTGGGGATTATCC 59.349 47.826 1.91 1.91 35.23 2.59
364 389 1.135689 GCTTGATGTTGGTTAGTGGCG 60.136 52.381 0.00 0.00 0.00 5.69
383 408 1.956678 TGCGCGTGACCAAAATCGA 60.957 52.632 8.43 0.00 0.00 3.59
428 453 1.660333 GCTGTTTTCTTCACCTTCGCG 60.660 52.381 0.00 0.00 0.00 5.87
451 476 2.760385 GCCCTGGGTACGCTCTCT 60.760 66.667 15.56 0.00 0.00 3.10
467 492 4.447054 CGCTCTCTCATAATTGTCATGACC 59.553 45.833 22.85 5.91 0.00 4.02
478 504 8.954350 CATAATTGTCATGACCTTTTCTCTCTT 58.046 33.333 22.85 4.56 0.00 2.85
508 536 4.631813 GTGAGATGTTAGCTTGGTTGTAGG 59.368 45.833 0.00 0.00 0.00 3.18
509 537 4.286032 TGAGATGTTAGCTTGGTTGTAGGT 59.714 41.667 0.00 0.00 0.00 3.08
510 538 4.579869 AGATGTTAGCTTGGTTGTAGGTG 58.420 43.478 0.00 0.00 0.00 4.00
511 539 2.500229 TGTTAGCTTGGTTGTAGGTGC 58.500 47.619 0.00 0.00 0.00 5.01
512 540 1.810755 GTTAGCTTGGTTGTAGGTGCC 59.189 52.381 0.00 0.00 0.00 5.01
513 541 0.326927 TAGCTTGGTTGTAGGTGCCC 59.673 55.000 0.00 0.00 0.00 5.36
514 542 1.074951 GCTTGGTTGTAGGTGCCCT 59.925 57.895 0.00 0.00 37.71 5.19
515 543 0.960861 GCTTGGTTGTAGGTGCCCTC 60.961 60.000 0.00 0.00 34.61 4.30
516 544 0.673644 CTTGGTTGTAGGTGCCCTCG 60.674 60.000 0.00 0.00 34.61 4.63
517 545 1.412453 TTGGTTGTAGGTGCCCTCGT 61.412 55.000 0.00 0.00 34.61 4.18
518 546 0.542467 TGGTTGTAGGTGCCCTCGTA 60.542 55.000 0.00 0.00 34.61 3.43
519 547 0.609662 GGTTGTAGGTGCCCTCGTAA 59.390 55.000 0.00 0.00 34.61 3.18
520 548 1.002315 GGTTGTAGGTGCCCTCGTAAA 59.998 52.381 0.00 0.00 34.61 2.01
521 549 2.550639 GGTTGTAGGTGCCCTCGTAAAA 60.551 50.000 0.00 0.00 34.61 1.52
522 550 3.140623 GTTGTAGGTGCCCTCGTAAAAA 58.859 45.455 0.00 0.00 34.61 1.94
865 956 4.430908 GGTCCGAACTTCAACAGTATAGG 58.569 47.826 0.00 0.00 32.94 2.57
918 1009 2.391389 CGGCGAGCCTTTGACTTCC 61.391 63.158 12.70 0.00 0.00 3.46
919 1010 1.302511 GGCGAGCCTTTGACTTCCA 60.303 57.895 6.90 0.00 0.00 3.53
922 1013 0.955919 CGAGCCTTTGACTTCCACCC 60.956 60.000 0.00 0.00 0.00 4.61
923 1014 0.110486 GAGCCTTTGACTTCCACCCA 59.890 55.000 0.00 0.00 0.00 4.51
929 1020 1.071314 TTGACTTCCACCCACCCCAT 61.071 55.000 0.00 0.00 0.00 4.00
936 1027 1.500783 CCACCCACCCCATCTTCAGT 61.501 60.000 0.00 0.00 0.00 3.41
949 1040 6.318900 CCCCATCTTCAGTATAGAACCAAAAC 59.681 42.308 0.00 0.00 0.00 2.43
1639 1798 8.430431 AGTTTGTTTAGAGAGCTTAAACCTACT 58.570 33.333 14.14 13.45 33.97 2.57
1683 1842 0.960364 TTCGAGCTGGGGTTCAATGC 60.960 55.000 0.00 0.00 0.00 3.56
1769 1954 0.169672 AACTTGCATGATCAGTGCGC 59.830 50.000 18.79 0.00 45.37 6.09
1806 1991 6.071334 AGTGTGTACTTGAGCTTAGCTTGATA 60.071 38.462 8.58 0.00 33.90 2.15
1902 2089 6.282199 TGAAGATAAGTCTCCCACACTTAC 57.718 41.667 0.00 0.00 38.79 2.34
1964 2151 2.430465 ACAAGTAGCATCAGCAACCAG 58.570 47.619 0.00 0.00 45.49 4.00
2008 2196 3.190874 GTTGCGAGGATCCTTTAGTCAG 58.809 50.000 17.42 3.22 0.00 3.51
2063 2251 4.873746 TGCTGCTAACAAGACTAGAAGT 57.126 40.909 0.00 0.00 0.00 3.01
2412 2600 2.896168 CCGGTGAGGTAATTCGCTTAA 58.104 47.619 0.00 0.00 34.51 1.85
2440 2628 6.373216 TGTTGCCCTGTTAATACAACTACATC 59.627 38.462 0.00 0.00 40.88 3.06
2597 2785 6.743575 AGTATCTGTACTTTTTGACATGGC 57.256 37.500 0.00 0.00 37.94 4.40
2786 2975 0.538057 CGGCCCTGATGCATAATGGT 60.538 55.000 0.00 0.00 0.00 3.55
2918 3312 6.798766 TGCATAATGGTATTTGGATATGGGA 58.201 36.000 0.00 0.00 0.00 4.37
2990 3384 6.607689 TGTGGTTTATCTTTTCATGTTAGCG 58.392 36.000 0.00 0.00 0.00 4.26
3165 3561 6.641314 AGTGAAGTTTACGTTAGTCATGTGAG 59.359 38.462 0.00 0.00 0.00 3.51
3252 3648 9.817809 CTAATAACTTGTAGTTGAGGCTCAATA 57.182 33.333 30.70 20.17 39.11 1.90
3531 3927 7.752239 CAGCAGTTTATACATCCTGAAAACTTG 59.248 37.037 0.00 0.00 38.08 3.16
3611 4007 9.555727 CTCCCTATTTTCTCAAAATTCCGTATA 57.444 33.333 0.00 0.00 41.16 1.47
3647 4043 2.745821 ACTGCACATGTTGATAGCTGTG 59.254 45.455 14.18 0.00 41.44 3.66
3693 4089 5.107298 GCTGAAATTGAGCTATGGTACGATC 60.107 44.000 0.00 0.00 33.37 3.69
3904 4301 7.197703 TCATGTTGCATTGTAGAGCATTTATG 58.802 34.615 0.00 0.00 40.94 1.90
3906 4303 6.554419 TGTTGCATTGTAGAGCATTTATGAC 58.446 36.000 0.00 0.00 40.94 3.06
3949 4348 0.897621 GAAGCCATTTGGGACCCAAG 59.102 55.000 24.95 15.40 44.84 3.61
4246 4645 4.826733 TGTGCTAGGACATGTTGATTGTTT 59.173 37.500 13.71 0.00 0.00 2.83
4247 4646 5.301551 TGTGCTAGGACATGTTGATTGTTTT 59.698 36.000 13.71 0.00 0.00 2.43
4323 4991 6.918022 AGCAGTACTATGTTTTTGTTTCAAGC 59.082 34.615 0.00 0.00 0.00 4.01
4465 5133 1.439353 GGTGTCAGTGCACTGTGTGG 61.439 60.000 38.41 19.18 44.12 4.17
4487 5155 5.648092 TGGCCTAGCTTTGTTATTTCTCTTC 59.352 40.000 3.32 0.00 0.00 2.87
4489 5157 5.220681 GCCTAGCTTTGTTATTTCTCTTCGG 60.221 44.000 0.00 0.00 0.00 4.30
4626 5298 5.594725 CCTACTAGACTTCCTTACATCTGCA 59.405 44.000 0.00 0.00 0.00 4.41
4688 5360 3.547649 AAAACGGTAATCGGCAAAGAC 57.452 42.857 0.00 0.00 44.45 3.01
4704 5376 4.972733 ACGCCCTTGTGCCATGCA 62.973 61.111 0.00 0.00 35.60 3.96
4785 5457 3.175152 TGCTGTTTGCTTACAAAACACG 58.825 40.909 0.00 0.00 46.94 4.49
5440 6112 0.179073 CTCTAAGGGCATGGGTGTCG 60.179 60.000 0.00 0.00 0.00 4.35
5624 6296 4.451096 CAGGAACATTAGTACGCAACAAGT 59.549 41.667 0.00 0.00 0.00 3.16
5745 6435 1.312815 GTGAAAGCACTGCCTTCTGT 58.687 50.000 12.55 0.00 41.84 3.41
5749 6439 2.464157 AAGCACTGCCTTCTGTAGTC 57.536 50.000 0.00 0.00 37.89 2.59
5760 6453 5.597182 TGCCTTCTGTAGTCCGTTCTTATAT 59.403 40.000 0.00 0.00 0.00 0.86
5766 6459 7.928103 TCTGTAGTCCGTTCTTATATCAAGAC 58.072 38.462 0.00 0.00 0.00 3.01
5929 6625 6.276832 AGATCCAGATCCAAACATTTGTTG 57.723 37.500 4.01 0.00 37.13 3.33
6003 6699 6.978080 ACTGCCATTTTTGTAAACTGTTACTG 59.022 34.615 0.00 0.00 40.35 2.74
6032 6728 3.903467 AGAATTTCCATAAGGGCAGGTC 58.097 45.455 0.00 0.00 36.21 3.85
6033 6729 3.269381 AGAATTTCCATAAGGGCAGGTCA 59.731 43.478 0.00 0.00 36.21 4.02
6043 6739 0.179045 GGGCAGGTCATATTCGTGCT 60.179 55.000 16.50 0.00 43.33 4.40
6105 6801 1.966354 TCAGCGCATCCAGTCATATCT 59.034 47.619 11.47 0.00 0.00 1.98
6139 6835 4.263331 GGGTGATGACCTCTTTTACTTCCA 60.263 45.833 0.00 0.00 42.66 3.53
6162 6872 6.320672 CCAAAGAGAACTATTGCCATCATCTT 59.679 38.462 0.00 0.00 0.00 2.40
6163 6873 7.500227 CCAAAGAGAACTATTGCCATCATCTTA 59.500 37.037 0.00 0.00 0.00 2.10
6218 6928 2.033372 TCGATTCAGTTGCGGGGTATA 58.967 47.619 0.00 0.00 0.00 1.47
6285 6995 8.186178 AGTACAGTATTATTTTCAGCTTCACG 57.814 34.615 0.00 0.00 0.00 4.35
6286 6996 6.422776 ACAGTATTATTTTCAGCTTCACGG 57.577 37.500 0.00 0.00 0.00 4.94
6287 6997 5.354234 ACAGTATTATTTTCAGCTTCACGGG 59.646 40.000 0.00 0.00 0.00 5.28
6288 6998 3.782889 ATTATTTTCAGCTTCACGGGC 57.217 42.857 0.00 0.00 0.00 6.13
6289 6999 2.489938 TATTTTCAGCTTCACGGGCT 57.510 45.000 0.00 0.00 41.07 5.19
6290 7000 1.620822 ATTTTCAGCTTCACGGGCTT 58.379 45.000 0.00 0.00 38.03 4.35
6291 7001 0.951558 TTTTCAGCTTCACGGGCTTC 59.048 50.000 0.00 0.00 38.03 3.86
6292 7002 0.179032 TTTCAGCTTCACGGGCTTCA 60.179 50.000 0.00 0.00 38.03 3.02
6293 7003 0.884704 TTCAGCTTCACGGGCTTCAC 60.885 55.000 0.00 0.00 38.03 3.18
6294 7004 1.302033 CAGCTTCACGGGCTTCACT 60.302 57.895 0.00 0.00 38.03 3.41
6295 7005 1.302033 AGCTTCACGGGCTTCACTG 60.302 57.895 0.00 0.00 36.56 3.66
6296 7006 2.970974 GCTTCACGGGCTTCACTGC 61.971 63.158 0.00 0.00 0.00 4.40
6297 7007 1.597854 CTTCACGGGCTTCACTGCA 60.598 57.895 0.00 0.00 34.04 4.41
6298 7008 1.845809 CTTCACGGGCTTCACTGCAC 61.846 60.000 0.00 0.00 34.04 4.57
6299 7009 2.591429 CACGGGCTTCACTGCACA 60.591 61.111 0.00 0.00 35.83 4.57
6300 7010 1.968017 CACGGGCTTCACTGCACAT 60.968 57.895 0.00 0.00 35.83 3.21
6301 7011 1.228245 ACGGGCTTCACTGCACATT 60.228 52.632 0.00 0.00 35.83 2.71
6302 7012 1.210931 CGGGCTTCACTGCACATTG 59.789 57.895 0.00 0.00 35.83 2.82
6303 7013 1.236616 CGGGCTTCACTGCACATTGA 61.237 55.000 0.00 0.00 35.83 2.57
6304 7014 0.524862 GGGCTTCACTGCACATTGAG 59.475 55.000 0.00 0.00 36.18 3.02
6305 7015 1.242076 GGCTTCACTGCACATTGAGT 58.758 50.000 0.00 0.00 34.04 3.41
6306 7016 2.426522 GGCTTCACTGCACATTGAGTA 58.573 47.619 0.00 0.00 34.04 2.59
6307 7017 2.417933 GGCTTCACTGCACATTGAGTAG 59.582 50.000 0.00 0.00 34.04 2.57
6308 7018 3.070018 GCTTCACTGCACATTGAGTAGT 58.930 45.455 0.00 0.00 0.00 2.73
6309 7019 3.499918 GCTTCACTGCACATTGAGTAGTT 59.500 43.478 2.31 0.00 0.00 2.24
6310 7020 4.612259 GCTTCACTGCACATTGAGTAGTTG 60.612 45.833 2.31 0.45 0.00 3.16
6311 7021 4.071961 TCACTGCACATTGAGTAGTTGT 57.928 40.909 2.31 0.00 0.00 3.32
6312 7022 3.809279 TCACTGCACATTGAGTAGTTGTG 59.191 43.478 2.31 0.00 42.80 3.33
6315 7025 2.880822 CACATTGAGTAGTTGTGCCG 57.119 50.000 0.00 0.00 34.89 5.69
6316 7026 2.412870 CACATTGAGTAGTTGTGCCGA 58.587 47.619 0.00 0.00 34.89 5.54
6317 7027 3.002791 CACATTGAGTAGTTGTGCCGAT 58.997 45.455 0.00 0.00 34.89 4.18
6318 7028 3.436704 CACATTGAGTAGTTGTGCCGATT 59.563 43.478 0.00 0.00 34.89 3.34
6319 7029 4.629634 CACATTGAGTAGTTGTGCCGATTA 59.370 41.667 0.00 0.00 34.89 1.75
6320 7030 4.630069 ACATTGAGTAGTTGTGCCGATTAC 59.370 41.667 0.00 0.00 0.00 1.89
6321 7031 2.871133 TGAGTAGTTGTGCCGATTACG 58.129 47.619 0.00 0.00 39.43 3.18
6322 7032 2.229543 TGAGTAGTTGTGCCGATTACGT 59.770 45.455 0.00 0.00 37.88 3.57
6323 7033 2.597305 GAGTAGTTGTGCCGATTACGTG 59.403 50.000 0.00 0.00 37.88 4.49
6324 7034 2.229543 AGTAGTTGTGCCGATTACGTGA 59.770 45.455 0.00 0.00 37.88 4.35
6325 7035 2.157834 AGTTGTGCCGATTACGTGAA 57.842 45.000 0.00 0.00 37.88 3.18
6326 7036 2.485903 AGTTGTGCCGATTACGTGAAA 58.514 42.857 0.00 0.00 37.88 2.69
6327 7037 2.873472 AGTTGTGCCGATTACGTGAAAA 59.127 40.909 0.00 0.00 37.88 2.29
6328 7038 3.500680 AGTTGTGCCGATTACGTGAAAAT 59.499 39.130 0.00 0.00 37.88 1.82
6329 7039 3.463533 TGTGCCGATTACGTGAAAATG 57.536 42.857 0.00 0.00 37.88 2.32
6330 7040 2.160615 TGTGCCGATTACGTGAAAATGG 59.839 45.455 0.00 0.00 37.88 3.16
6331 7041 2.417239 GTGCCGATTACGTGAAAATGGA 59.583 45.455 0.00 0.00 37.88 3.41
6332 7042 2.417239 TGCCGATTACGTGAAAATGGAC 59.583 45.455 0.00 0.00 37.88 4.02
6333 7043 2.417239 GCCGATTACGTGAAAATGGACA 59.583 45.455 0.00 0.00 37.88 4.02
6334 7044 3.120130 GCCGATTACGTGAAAATGGACAA 60.120 43.478 0.00 0.00 37.88 3.18
6335 7045 4.614078 GCCGATTACGTGAAAATGGACAAA 60.614 41.667 0.00 0.00 37.88 2.83
6336 7046 5.453648 CCGATTACGTGAAAATGGACAAAA 58.546 37.500 0.00 0.00 37.88 2.44
6337 7047 5.341196 CCGATTACGTGAAAATGGACAAAAC 59.659 40.000 0.00 0.00 37.88 2.43
6338 7048 6.140110 CGATTACGTGAAAATGGACAAAACT 58.860 36.000 0.00 0.00 34.56 2.66
6339 7049 6.086241 CGATTACGTGAAAATGGACAAAACTG 59.914 38.462 0.00 0.00 34.56 3.16
6340 7050 4.040445 ACGTGAAAATGGACAAAACTGG 57.960 40.909 0.00 0.00 0.00 4.00
6341 7051 2.794350 CGTGAAAATGGACAAAACTGGC 59.206 45.455 0.00 0.00 0.00 4.85
6342 7052 3.130633 GTGAAAATGGACAAAACTGGCC 58.869 45.455 0.00 0.00 37.53 5.36
6343 7053 2.103941 TGAAAATGGACAAAACTGGCCC 59.896 45.455 0.00 0.00 35.66 5.80
6344 7054 1.799933 AAATGGACAAAACTGGCCCA 58.200 45.000 0.00 0.00 35.66 5.36
6345 7055 2.028561 AATGGACAAAACTGGCCCAT 57.971 45.000 0.00 0.00 39.12 4.00
6346 7056 2.917713 ATGGACAAAACTGGCCCATA 57.082 45.000 0.00 0.00 35.66 2.74
6347 7057 2.917713 TGGACAAAACTGGCCCATAT 57.082 45.000 0.00 0.00 35.66 1.78
6348 7058 2.733956 TGGACAAAACTGGCCCATATC 58.266 47.619 0.00 0.00 35.66 1.63
6349 7059 2.311542 TGGACAAAACTGGCCCATATCT 59.688 45.455 0.00 0.00 35.66 1.98
6350 7060 2.689983 GGACAAAACTGGCCCATATCTG 59.310 50.000 0.00 0.00 0.00 2.90
6351 7061 3.620488 GACAAAACTGGCCCATATCTGA 58.380 45.455 0.00 0.00 0.00 3.27
6352 7062 4.016444 GACAAAACTGGCCCATATCTGAA 58.984 43.478 0.00 0.00 0.00 3.02
6353 7063 4.415596 ACAAAACTGGCCCATATCTGAAA 58.584 39.130 0.00 0.00 0.00 2.69
6354 7064 4.220602 ACAAAACTGGCCCATATCTGAAAC 59.779 41.667 0.00 0.00 0.00 2.78
6355 7065 4.322057 AAACTGGCCCATATCTGAAACT 57.678 40.909 0.00 0.00 0.00 2.66
6356 7066 4.322057 AACTGGCCCATATCTGAAACTT 57.678 40.909 0.00 0.00 0.00 2.66
6357 7067 3.891049 ACTGGCCCATATCTGAAACTTC 58.109 45.455 0.00 0.00 0.00 3.01
6358 7068 3.266772 ACTGGCCCATATCTGAAACTTCA 59.733 43.478 0.00 0.00 35.57 3.02
6359 7069 4.263905 ACTGGCCCATATCTGAAACTTCAA 60.264 41.667 0.00 0.00 36.64 2.69
6360 7070 4.016444 TGGCCCATATCTGAAACTTCAAC 58.984 43.478 0.00 0.00 36.64 3.18
6361 7071 4.016444 GGCCCATATCTGAAACTTCAACA 58.984 43.478 0.00 0.00 36.64 3.33
6362 7072 4.142381 GGCCCATATCTGAAACTTCAACAC 60.142 45.833 0.00 0.00 36.64 3.32
6363 7073 4.458989 GCCCATATCTGAAACTTCAACACA 59.541 41.667 0.00 0.00 36.64 3.72
6364 7074 5.048083 GCCCATATCTGAAACTTCAACACAA 60.048 40.000 0.00 0.00 36.64 3.33
6365 7075 6.516527 GCCCATATCTGAAACTTCAACACAAA 60.517 38.462 0.00 0.00 36.64 2.83
6366 7076 7.432869 CCCATATCTGAAACTTCAACACAAAA 58.567 34.615 0.00 0.00 36.64 2.44
6367 7077 8.090214 CCCATATCTGAAACTTCAACACAAAAT 58.910 33.333 0.00 0.00 36.64 1.82
6368 7078 8.918658 CCATATCTGAAACTTCAACACAAAATG 58.081 33.333 0.00 0.00 36.64 2.32
6369 7079 8.918658 CATATCTGAAACTTCAACACAAAATGG 58.081 33.333 0.00 0.00 36.64 3.16
6370 7080 5.108517 TCTGAAACTTCAACACAAAATGGC 58.891 37.500 0.00 0.00 36.64 4.40
6371 7081 4.187694 TGAAACTTCAACACAAAATGGCC 58.812 39.130 0.00 0.00 33.55 5.36
6372 7082 2.908688 ACTTCAACACAAAATGGCCC 57.091 45.000 0.00 0.00 0.00 5.80
6373 7083 1.416030 ACTTCAACACAAAATGGCCCC 59.584 47.619 0.00 0.00 0.00 5.80
6374 7084 1.415659 CTTCAACACAAAATGGCCCCA 59.584 47.619 0.00 0.00 0.00 4.96
6375 7085 1.500474 TCAACACAAAATGGCCCCAA 58.500 45.000 0.00 0.00 0.00 4.12
6376 7086 2.053244 TCAACACAAAATGGCCCCAAT 58.947 42.857 0.00 0.00 0.00 3.16
6377 7087 2.038295 TCAACACAAAATGGCCCCAATC 59.962 45.455 0.00 0.00 0.00 2.67
6378 7088 2.028561 ACACAAAATGGCCCCAATCT 57.971 45.000 0.00 0.00 0.00 2.40
6379 7089 1.624813 ACACAAAATGGCCCCAATCTG 59.375 47.619 0.00 0.00 0.00 2.90
6380 7090 1.901159 CACAAAATGGCCCCAATCTGA 59.099 47.619 0.00 0.00 0.00 3.27
6381 7091 2.302445 CACAAAATGGCCCCAATCTGAA 59.698 45.455 0.00 0.00 0.00 3.02
6382 7092 2.978278 ACAAAATGGCCCCAATCTGAAA 59.022 40.909 0.00 0.00 0.00 2.69
6383 7093 3.393941 ACAAAATGGCCCCAATCTGAAAA 59.606 39.130 0.00 0.00 0.00 2.29
6384 7094 4.141298 ACAAAATGGCCCCAATCTGAAAAA 60.141 37.500 0.00 0.00 0.00 1.94
6385 7095 4.932911 AAATGGCCCCAATCTGAAAAAT 57.067 36.364 0.00 0.00 0.00 1.82
6386 7096 4.932911 AATGGCCCCAATCTGAAAAATT 57.067 36.364 0.00 0.00 0.00 1.82
6387 7097 4.932911 ATGGCCCCAATCTGAAAAATTT 57.067 36.364 0.00 0.00 0.00 1.82
6388 7098 4.284829 TGGCCCCAATCTGAAAAATTTC 57.715 40.909 0.00 0.00 37.69 2.17
6389 7099 3.649981 TGGCCCCAATCTGAAAAATTTCA 59.350 39.130 0.00 8.21 44.31 2.69
6390 7100 4.002982 GGCCCCAATCTGAAAAATTTCAC 58.997 43.478 4.52 0.00 41.88 3.18
6391 7101 3.679502 GCCCCAATCTGAAAAATTTCACG 59.320 43.478 4.52 2.68 41.88 4.35
6392 7102 4.560513 GCCCCAATCTGAAAAATTTCACGA 60.561 41.667 4.52 7.29 41.88 4.35
6393 7103 5.537188 CCCCAATCTGAAAAATTTCACGAA 58.463 37.500 4.52 0.00 41.88 3.85
6394 7104 5.988561 CCCCAATCTGAAAAATTTCACGAAA 59.011 36.000 4.52 0.00 41.88 3.46
6395 7105 6.650390 CCCCAATCTGAAAAATTTCACGAAAT 59.350 34.615 4.52 0.00 41.88 2.17
6396 7106 7.360269 CCCCAATCTGAAAAATTTCACGAAATG 60.360 37.037 5.80 9.43 41.88 2.32
6397 7107 7.360269 CCCAATCTGAAAAATTTCACGAAATGG 60.360 37.037 19.78 19.78 41.88 3.16
6398 7108 6.710692 ATCTGAAAAATTTCACGAAATGGC 57.289 33.333 5.80 0.00 41.88 4.40
6399 7109 4.987912 TCTGAAAAATTTCACGAAATGGCC 59.012 37.500 5.80 0.00 41.88 5.36
6400 7110 4.061596 TGAAAAATTTCACGAAATGGCCC 58.938 39.130 0.00 0.00 41.88 5.80
6401 7111 4.202305 TGAAAAATTTCACGAAATGGCCCT 60.202 37.500 0.00 0.00 41.88 5.19
6402 7112 4.350368 AAAATTTCACGAAATGGCCCTT 57.650 36.364 0.00 0.00 40.57 3.95
6403 7113 4.350368 AAATTTCACGAAATGGCCCTTT 57.650 36.364 5.61 5.61 40.57 3.11
6404 7114 4.350368 AATTTCACGAAATGGCCCTTTT 57.650 36.364 7.49 3.95 40.57 2.27
6405 7115 3.828875 TTTCACGAAATGGCCCTTTTT 57.171 38.095 7.49 1.32 0.00 1.94
6406 7116 2.810439 TCACGAAATGGCCCTTTTTG 57.190 45.000 7.49 10.13 0.00 2.44
6407 7117 1.147473 CACGAAATGGCCCTTTTTGC 58.853 50.000 7.49 0.00 0.00 3.68
6408 7118 0.755686 ACGAAATGGCCCTTTTTGCA 59.244 45.000 7.49 0.00 0.00 4.08
6409 7119 1.347378 ACGAAATGGCCCTTTTTGCAT 59.653 42.857 7.49 0.00 0.00 3.96
6410 7120 1.733360 CGAAATGGCCCTTTTTGCATG 59.267 47.619 7.49 0.00 0.00 4.06
6411 7121 2.612471 CGAAATGGCCCTTTTTGCATGA 60.612 45.455 7.49 0.00 0.00 3.07
6412 7122 2.477845 AATGGCCCTTTTTGCATGAC 57.522 45.000 0.00 0.00 0.00 3.06
6413 7123 0.247185 ATGGCCCTTTTTGCATGACG 59.753 50.000 0.00 0.00 0.00 4.35
6414 7124 1.737735 GGCCCTTTTTGCATGACGC 60.738 57.895 0.00 0.00 42.89 5.19
6415 7125 1.737735 GCCCTTTTTGCATGACGCC 60.738 57.895 0.00 0.00 41.33 5.68
6416 7126 1.966762 CCCTTTTTGCATGACGCCT 59.033 52.632 0.00 0.00 41.33 5.52
6417 7127 0.388907 CCCTTTTTGCATGACGCCTG 60.389 55.000 0.00 0.00 41.33 4.85
6418 7128 0.388907 CCTTTTTGCATGACGCCTGG 60.389 55.000 0.00 0.00 41.33 4.45
6419 7129 0.388907 CTTTTTGCATGACGCCTGGG 60.389 55.000 0.00 0.00 41.33 4.45
6420 7130 1.814772 TTTTTGCATGACGCCTGGGG 61.815 55.000 9.49 9.49 41.33 4.96
6437 7147 2.358003 GCTAGGGCGCCATGCTAG 60.358 66.667 30.85 27.56 45.43 3.42
6438 7148 2.872388 GCTAGGGCGCCATGCTAGA 61.872 63.158 30.84 10.87 45.43 2.43
6439 7149 1.978473 CTAGGGCGCCATGCTAGAT 59.022 57.895 30.85 5.35 45.43 1.98
6440 7150 1.186200 CTAGGGCGCCATGCTAGATA 58.814 55.000 30.85 2.36 45.43 1.98
6441 7151 1.135915 CTAGGGCGCCATGCTAGATAG 59.864 57.143 30.85 9.89 45.43 2.08
6442 7152 1.078848 GGGCGCCATGCTAGATAGG 60.079 63.158 30.85 0.00 45.43 2.57
6443 7153 1.544825 GGGCGCCATGCTAGATAGGA 61.545 60.000 30.85 0.00 45.43 2.94
6444 7154 0.539051 GGCGCCATGCTAGATAGGAT 59.461 55.000 24.80 0.00 45.43 3.24
6451 7161 1.257743 TGCTAGATAGGATGACGCCC 58.742 55.000 0.00 0.00 0.00 6.13
6452 7162 0.533032 GCTAGATAGGATGACGCCCC 59.467 60.000 0.00 0.00 0.00 5.80
6453 7163 0.811915 CTAGATAGGATGACGCCCCG 59.188 60.000 0.00 0.00 0.00 5.73
6454 7164 0.611062 TAGATAGGATGACGCCCCGG 60.611 60.000 0.00 0.00 0.00 5.73
6455 7165 2.923035 ATAGGATGACGCCCCGGG 60.923 66.667 15.80 15.80 0.00 5.73
6468 7178 4.609018 CCGGGCTAGGGCGTCATG 62.609 72.222 0.00 0.00 39.81 3.07
6470 7180 3.866582 GGGCTAGGGCGTCATGCT 61.867 66.667 0.00 0.00 45.43 3.79
6471 7181 2.507854 GGGCTAGGGCGTCATGCTA 61.508 63.158 0.00 0.00 45.43 3.49
6472 7182 1.301009 GGCTAGGGCGTCATGCTAC 60.301 63.158 0.00 0.00 45.43 3.58
6473 7183 1.742768 GCTAGGGCGTCATGCTACT 59.257 57.895 0.00 0.00 45.43 2.57
6474 7184 0.105039 GCTAGGGCGTCATGCTACTT 59.895 55.000 0.00 0.00 45.43 2.24
6475 7185 1.858091 CTAGGGCGTCATGCTACTTG 58.142 55.000 0.00 0.00 45.43 3.16
6476 7186 0.464036 TAGGGCGTCATGCTACTTGG 59.536 55.000 0.00 0.00 45.43 3.61
6477 7187 2.472909 GGGCGTCATGCTACTTGGC 61.473 63.158 0.00 0.00 45.43 4.52
6478 7188 1.745115 GGCGTCATGCTACTTGGCA 60.745 57.895 0.00 0.00 46.63 4.92
6484 7194 4.001248 TGCTACTTGGCATGGTGC 57.999 55.556 5.31 8.71 44.08 5.01
6509 7219 4.935495 CGGGGCGCCATGCTACAT 62.935 66.667 30.85 0.00 45.43 2.29
6510 7220 3.289834 GGGGCGCCATGCTACATG 61.290 66.667 30.85 0.48 45.43 3.21
6511 7221 2.516930 GGGCGCCATGCTACATGT 60.517 61.111 30.85 2.69 45.43 3.21
6512 7222 2.546494 GGGCGCCATGCTACATGTC 61.546 63.158 30.85 1.22 45.43 3.06
6513 7223 2.628106 GCGCCATGCTACATGTCG 59.372 61.111 0.00 6.64 41.73 4.35
6514 7224 2.628106 CGCCATGCTACATGTCGC 59.372 61.111 15.06 15.06 0.00 5.19
6515 7225 1.884464 CGCCATGCTACATGTCGCT 60.884 57.895 21.42 6.26 0.00 4.93
6516 7226 0.597377 CGCCATGCTACATGTCGCTA 60.597 55.000 21.42 9.79 0.00 4.26
6517 7227 0.861837 GCCATGCTACATGTCGCTAC 59.138 55.000 21.42 6.37 0.00 3.58
6518 7228 1.502231 CCATGCTACATGTCGCTACC 58.498 55.000 21.42 0.00 0.00 3.18
6519 7229 1.202521 CCATGCTACATGTCGCTACCA 60.203 52.381 21.42 3.45 0.00 3.25
6520 7230 2.548707 CCATGCTACATGTCGCTACCAT 60.549 50.000 21.42 5.62 0.00 3.55
6521 7231 2.223537 TGCTACATGTCGCTACCATG 57.776 50.000 21.42 0.00 44.17 3.66
6522 7232 1.754226 TGCTACATGTCGCTACCATGA 59.246 47.619 21.42 0.00 41.78 3.07
6523 7233 2.128035 GCTACATGTCGCTACCATGAC 58.872 52.381 14.69 0.00 41.78 3.06
6524 7234 2.385315 CTACATGTCGCTACCATGACG 58.615 52.381 0.00 0.00 41.78 4.35
6525 7235 0.530744 ACATGTCGCTACCATGACGT 59.469 50.000 12.32 0.00 41.78 4.34
6526 7236 1.200483 CATGTCGCTACCATGACGTC 58.800 55.000 9.11 9.11 41.78 4.34
6527 7237 0.102481 ATGTCGCTACCATGACGTCC 59.898 55.000 14.12 0.00 37.94 4.79
6528 7238 0.963856 TGTCGCTACCATGACGTCCT 60.964 55.000 14.12 0.00 37.94 3.85
6529 7239 1.019673 GTCGCTACCATGACGTCCTA 58.980 55.000 14.12 0.00 0.00 2.94
6530 7240 1.002684 GTCGCTACCATGACGTCCTAG 60.003 57.143 14.12 7.58 0.00 3.02
6531 7241 0.317938 CGCTACCATGACGTCCTAGC 60.318 60.000 14.12 15.39 0.00 3.42
6532 7242 0.032267 GCTACCATGACGTCCTAGCC 59.968 60.000 14.12 0.58 0.00 3.93
6533 7243 0.674534 CTACCATGACGTCCTAGCCC 59.325 60.000 14.12 0.00 0.00 5.19
6534 7244 1.105167 TACCATGACGTCCTAGCCCG 61.105 60.000 14.12 0.00 0.00 6.13
6535 7245 2.417516 CATGACGTCCTAGCCCGG 59.582 66.667 14.12 0.00 0.00 5.73
6536 7246 2.838225 ATGACGTCCTAGCCCGGG 60.838 66.667 19.09 19.09 0.00 5.73
6549 7259 4.899239 CCGGGGCGTCATGCTCTC 62.899 72.222 0.00 0.00 46.29 3.20
6550 7260 3.842923 CGGGGCGTCATGCTCTCT 61.843 66.667 0.00 0.00 46.29 3.10
6551 7261 2.490148 CGGGGCGTCATGCTCTCTA 61.490 63.158 0.00 0.00 46.29 2.43
6552 7262 1.365633 GGGGCGTCATGCTCTCTAG 59.634 63.158 0.00 0.00 46.29 2.43
6553 7263 2.707529 GGGGCGTCATGCTCTCTAGC 62.708 65.000 0.00 0.00 46.29 3.42
6566 7276 2.295909 CTCTCTAGCATGACACCCTAGC 59.704 54.545 0.00 0.00 0.00 3.42
6567 7277 1.342819 CTCTAGCATGACACCCTAGCC 59.657 57.143 0.00 0.00 0.00 3.93
6568 7278 0.394565 CTAGCATGACACCCTAGCCC 59.605 60.000 0.00 0.00 0.00 5.19
6569 7279 1.054406 TAGCATGACACCCTAGCCCC 61.054 60.000 0.00 0.00 0.00 5.80
6570 7280 2.505982 CATGACACCCTAGCCCCG 59.494 66.667 0.00 0.00 0.00 5.73
6571 7281 2.040606 ATGACACCCTAGCCCCGT 59.959 61.111 0.00 0.00 0.00 5.28
6572 7282 2.367202 ATGACACCCTAGCCCCGTG 61.367 63.158 0.00 0.00 0.00 4.94
6573 7283 4.468689 GACACCCTAGCCCCGTGC 62.469 72.222 0.00 0.00 41.71 5.34
6590 7300 2.716988 GCGTCATGCAAAAGTGAGC 58.283 52.632 0.00 0.00 45.45 4.26
6591 7301 0.730494 GCGTCATGCAAAAGTGAGCC 60.730 55.000 0.00 0.00 45.45 4.70
6592 7302 0.592637 CGTCATGCAAAAGTGAGCCA 59.407 50.000 0.00 0.00 0.00 4.75
6593 7303 1.200716 CGTCATGCAAAAGTGAGCCAT 59.799 47.619 0.00 0.00 0.00 4.40
6594 7304 2.352030 CGTCATGCAAAAGTGAGCCATT 60.352 45.455 0.00 0.00 0.00 3.16
6595 7305 3.656559 GTCATGCAAAAGTGAGCCATTT 58.343 40.909 0.00 0.00 0.00 2.32
6596 7306 3.676646 GTCATGCAAAAGTGAGCCATTTC 59.323 43.478 0.00 0.00 0.00 2.17
6597 7307 3.321396 TCATGCAAAAGTGAGCCATTTCA 59.679 39.130 0.00 0.00 0.00 2.69
6598 7308 4.020928 TCATGCAAAAGTGAGCCATTTCAT 60.021 37.500 0.00 0.00 0.00 2.57
6599 7309 3.655486 TGCAAAAGTGAGCCATTTCATG 58.345 40.909 0.00 0.00 0.00 3.07
6600 7310 3.321396 TGCAAAAGTGAGCCATTTCATGA 59.679 39.130 0.00 0.00 0.00 3.07
6601 7311 4.202233 TGCAAAAGTGAGCCATTTCATGAA 60.202 37.500 3.38 3.38 0.00 2.57
6602 7312 4.751098 GCAAAAGTGAGCCATTTCATGAAA 59.249 37.500 22.52 22.52 34.46 2.69
6603 7313 5.410439 GCAAAAGTGAGCCATTTCATGAAAT 59.590 36.000 24.83 24.83 41.33 2.17
6604 7314 6.591062 GCAAAAGTGAGCCATTTCATGAAATA 59.409 34.615 28.61 13.65 38.84 1.40
6605 7315 7.279313 GCAAAAGTGAGCCATTTCATGAAATAT 59.721 33.333 28.61 19.06 38.84 1.28
6606 7316 9.158233 CAAAAGTGAGCCATTTCATGAAATATT 57.842 29.630 28.61 18.38 38.84 1.28
6607 7317 9.729281 AAAAGTGAGCCATTTCATGAAATATTT 57.271 25.926 28.61 18.07 38.84 1.40
6608 7318 9.729281 AAAGTGAGCCATTTCATGAAATATTTT 57.271 25.926 28.61 19.28 38.84 1.82
6609 7319 8.937634 AGTGAGCCATTTCATGAAATATTTTC 57.062 30.769 28.61 22.31 38.84 2.29
6610 7320 8.533657 AGTGAGCCATTTCATGAAATATTTTCA 58.466 29.630 28.61 24.02 38.84 2.69
6611 7321 8.814235 GTGAGCCATTTCATGAAATATTTTCAG 58.186 33.333 28.61 16.46 38.84 3.02
6612 7322 8.751242 TGAGCCATTTCATGAAATATTTTCAGA 58.249 29.630 28.61 9.39 38.84 3.27
6613 7323 9.760077 GAGCCATTTCATGAAATATTTTCAGAT 57.240 29.630 28.61 12.97 38.84 2.90
6618 7328 9.841295 ATTTCATGAAATATTTTCAGATTGGGG 57.159 29.630 28.17 0.00 39.08 4.96
6619 7329 7.976414 TCATGAAATATTTTCAGATTGGGGT 57.024 32.000 1.43 0.00 0.00 4.95
6620 7330 8.010733 TCATGAAATATTTTCAGATTGGGGTC 57.989 34.615 1.43 0.00 0.00 4.46
6621 7331 7.618907 TCATGAAATATTTTCAGATTGGGGTCA 59.381 33.333 1.43 0.00 0.00 4.02
6622 7332 7.976414 TGAAATATTTTCAGATTGGGGTCAT 57.024 32.000 1.43 0.00 0.00 3.06
6623 7333 8.378115 TGAAATATTTTCAGATTGGGGTCATT 57.622 30.769 1.43 0.00 0.00 2.57
6624 7334 8.824783 TGAAATATTTTCAGATTGGGGTCATTT 58.175 29.630 1.43 0.00 0.00 2.32
6625 7335 9.671279 GAAATATTTTCAGATTGGGGTCATTTT 57.329 29.630 1.43 0.00 0.00 1.82
6626 7336 9.452287 AAATATTTTCAGATTGGGGTCATTTTG 57.548 29.630 0.00 0.00 0.00 2.44
6627 7337 5.885449 TTTTCAGATTGGGGTCATTTTGT 57.115 34.783 0.00 0.00 0.00 2.83
6628 7338 4.870123 TTCAGATTGGGGTCATTTTGTG 57.130 40.909 0.00 0.00 0.00 3.33
6629 7339 3.843422 TCAGATTGGGGTCATTTTGTGT 58.157 40.909 0.00 0.00 0.00 3.72
6630 7340 4.222336 TCAGATTGGGGTCATTTTGTGTT 58.778 39.130 0.00 0.00 0.00 3.32
6631 7341 4.039004 TCAGATTGGGGTCATTTTGTGTTG 59.961 41.667 0.00 0.00 0.00 3.33
6632 7342 4.039004 CAGATTGGGGTCATTTTGTGTTGA 59.961 41.667 0.00 0.00 0.00 3.18
6633 7343 4.653341 AGATTGGGGTCATTTTGTGTTGAA 59.347 37.500 0.00 0.00 0.00 2.69
6634 7344 4.399004 TTGGGGTCATTTTGTGTTGAAG 57.601 40.909 0.00 0.00 0.00 3.02
6635 7345 3.370104 TGGGGTCATTTTGTGTTGAAGT 58.630 40.909 0.00 0.00 0.00 3.01
6636 7346 3.772025 TGGGGTCATTTTGTGTTGAAGTT 59.228 39.130 0.00 0.00 0.00 2.66
6637 7347 4.223923 TGGGGTCATTTTGTGTTGAAGTTT 59.776 37.500 0.00 0.00 0.00 2.66
6638 7348 4.808895 GGGGTCATTTTGTGTTGAAGTTTC 59.191 41.667 0.00 0.00 0.00 2.78
6639 7349 5.415221 GGGTCATTTTGTGTTGAAGTTTCA 58.585 37.500 0.00 0.00 34.92 2.69
6640 7350 5.872070 GGGTCATTTTGTGTTGAAGTTTCAA 59.128 36.000 3.28 3.28 44.31 2.69
6654 7364 8.650143 TTGAAGTTTCAAATAAGGGCTAGATT 57.350 30.769 4.89 0.00 43.62 2.40
6655 7365 8.650143 TGAAGTTTCAAATAAGGGCTAGATTT 57.350 30.769 0.00 0.00 33.55 2.17
6656 7366 8.522830 TGAAGTTTCAAATAAGGGCTAGATTTG 58.477 33.333 0.00 0.57 40.40 2.32
6657 7367 8.422577 AAGTTTCAAATAAGGGCTAGATTTGT 57.577 30.769 11.49 0.00 40.11 2.83
6658 7368 8.422577 AGTTTCAAATAAGGGCTAGATTTGTT 57.577 30.769 11.49 0.00 40.11 2.83
6659 7369 8.523658 AGTTTCAAATAAGGGCTAGATTTGTTC 58.476 33.333 11.49 6.02 40.11 3.18
6660 7370 8.303876 GTTTCAAATAAGGGCTAGATTTGTTCA 58.696 33.333 11.49 0.00 40.11 3.18
6661 7371 8.593945 TTCAAATAAGGGCTAGATTTGTTCAT 57.406 30.769 11.49 0.00 40.11 2.57
6662 7372 8.593945 TCAAATAAGGGCTAGATTTGTTCATT 57.406 30.769 11.49 0.00 40.11 2.57
6663 7373 9.034800 TCAAATAAGGGCTAGATTTGTTCATTT 57.965 29.630 11.49 0.00 40.11 2.32
6664 7374 9.657419 CAAATAAGGGCTAGATTTGTTCATTTT 57.343 29.630 0.00 0.00 36.33 1.82
6665 7375 9.875691 AAATAAGGGCTAGATTTGTTCATTTTC 57.124 29.630 0.00 0.00 0.00 2.29
6666 7376 6.916360 AAGGGCTAGATTTGTTCATTTTCA 57.084 33.333 0.00 0.00 0.00 2.69
6667 7377 6.272822 AGGGCTAGATTTGTTCATTTTCAC 57.727 37.500 0.00 0.00 0.00 3.18
6668 7378 5.095490 GGGCTAGATTTGTTCATTTTCACG 58.905 41.667 0.00 0.00 0.00 4.35
6669 7379 4.558860 GGCTAGATTTGTTCATTTTCACGC 59.441 41.667 0.00 0.00 0.00 5.34
6670 7380 4.558860 GCTAGATTTGTTCATTTTCACGCC 59.441 41.667 0.00 0.00 0.00 5.68
6671 7381 3.564511 AGATTTGTTCATTTTCACGCCG 58.435 40.909 0.00 0.00 0.00 6.46
6672 7382 3.252215 AGATTTGTTCATTTTCACGCCGA 59.748 39.130 0.00 0.00 0.00 5.54
6673 7383 3.634568 TTTGTTCATTTTCACGCCGAT 57.365 38.095 0.00 0.00 0.00 4.18
6674 7384 3.634568 TTGTTCATTTTCACGCCGATT 57.365 38.095 0.00 0.00 0.00 3.34
6675 7385 4.750952 TTGTTCATTTTCACGCCGATTA 57.249 36.364 0.00 0.00 0.00 1.75
6676 7386 4.073169 TGTTCATTTTCACGCCGATTAC 57.927 40.909 0.00 0.00 0.00 1.89
6677 7387 3.749088 TGTTCATTTTCACGCCGATTACT 59.251 39.130 0.00 0.00 0.00 2.24
6678 7388 4.930405 TGTTCATTTTCACGCCGATTACTA 59.070 37.500 0.00 0.00 0.00 1.82
6679 7389 5.583061 TGTTCATTTTCACGCCGATTACTAT 59.417 36.000 0.00 0.00 0.00 2.12
6680 7390 5.900339 TCATTTTCACGCCGATTACTATC 57.100 39.130 0.00 0.00 0.00 2.08
6681 7391 5.353111 TCATTTTCACGCCGATTACTATCA 58.647 37.500 0.00 0.00 0.00 2.15
6682 7392 5.462068 TCATTTTCACGCCGATTACTATCAG 59.538 40.000 0.00 0.00 0.00 2.90
6683 7393 3.364889 TTCACGCCGATTACTATCAGG 57.635 47.619 0.00 0.00 0.00 3.86
6684 7394 2.578786 TCACGCCGATTACTATCAGGA 58.421 47.619 0.00 0.00 30.72 3.86
6685 7395 2.953648 TCACGCCGATTACTATCAGGAA 59.046 45.455 0.00 0.00 30.72 3.36
6686 7396 3.572682 TCACGCCGATTACTATCAGGAAT 59.427 43.478 0.00 0.00 30.72 3.01
6687 7397 4.763279 TCACGCCGATTACTATCAGGAATA 59.237 41.667 0.00 0.00 30.72 1.75
6688 7398 5.242171 TCACGCCGATTACTATCAGGAATAA 59.758 40.000 0.00 0.00 30.72 1.40
6689 7399 5.924254 CACGCCGATTACTATCAGGAATAAA 59.076 40.000 0.00 0.00 30.72 1.40
6690 7400 6.089551 CACGCCGATTACTATCAGGAATAAAG 59.910 42.308 0.00 0.00 30.72 1.85
6691 7401 6.015688 ACGCCGATTACTATCAGGAATAAAGA 60.016 38.462 0.00 0.00 30.72 2.52
6692 7402 6.528423 CGCCGATTACTATCAGGAATAAAGAG 59.472 42.308 0.00 0.00 30.72 2.85
6693 7403 7.575155 CGCCGATTACTATCAGGAATAAAGAGA 60.575 40.741 0.00 0.00 30.72 3.10
6694 7404 8.254508 GCCGATTACTATCAGGAATAAAGAGAT 58.745 37.037 0.00 0.00 30.72 2.75
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
39 40 2.320587 GCTGCTCAAGGTCACCACG 61.321 63.158 0.00 0.00 0.00 4.94
67 68 1.598962 TCAACCGAGTCGACGACCT 60.599 57.895 23.76 11.59 32.18 3.85
243 245 0.463654 TAGAACCCATGACGCCATGC 60.464 55.000 6.14 0.00 46.73 4.06
312 337 2.274542 TCCCCACCATCTACACAACAT 58.725 47.619 0.00 0.00 0.00 2.71
338 363 5.396484 CACTAACCAACATCAAGCATCAAG 58.604 41.667 0.00 0.00 0.00 3.02
364 389 1.792057 CGATTTTGGTCACGCGCAC 60.792 57.895 5.73 2.39 0.00 5.34
383 408 1.895131 CACAAGCCCTAGTGCCAAAAT 59.105 47.619 0.00 0.00 0.00 1.82
412 437 0.107081 TCCCGCGAAGGTGAAGAAAA 59.893 50.000 8.23 0.00 38.74 2.29
443 468 5.046529 GTCATGACAATTATGAGAGAGCGT 58.953 41.667 21.07 0.00 35.39 5.07
451 476 8.324306 AGAGAGAAAAGGTCATGACAATTATGA 58.676 33.333 26.47 0.00 32.44 2.15
467 492 9.868277 ACATCTCACTATTGTAAGAGAGAAAAG 57.132 33.333 5.35 2.73 43.44 2.27
478 504 7.182817 ACCAAGCTAACATCTCACTATTGTA 57.817 36.000 0.00 0.00 0.00 2.41
479 505 6.054860 ACCAAGCTAACATCTCACTATTGT 57.945 37.500 0.00 0.00 0.00 2.71
522 550 3.767131 ACACACCTACAACCAAGCTTTTT 59.233 39.130 0.00 0.00 0.00 1.94
523 551 3.130340 CACACACCTACAACCAAGCTTTT 59.870 43.478 0.00 0.00 0.00 2.27
524 552 2.687935 CACACACCTACAACCAAGCTTT 59.312 45.455 0.00 0.00 0.00 3.51
525 553 2.297701 CACACACCTACAACCAAGCTT 58.702 47.619 0.00 0.00 0.00 3.74
526 554 1.211949 ACACACACCTACAACCAAGCT 59.788 47.619 0.00 0.00 0.00 3.74
527 555 1.675552 ACACACACCTACAACCAAGC 58.324 50.000 0.00 0.00 0.00 4.01
528 556 4.879545 ACTAAACACACACCTACAACCAAG 59.120 41.667 0.00 0.00 0.00 3.61
529 557 4.846040 ACTAAACACACACCTACAACCAA 58.154 39.130 0.00 0.00 0.00 3.67
530 558 4.490899 ACTAAACACACACCTACAACCA 57.509 40.909 0.00 0.00 0.00 3.67
531 559 5.049886 GCTAACTAAACACACACCTACAACC 60.050 44.000 0.00 0.00 0.00 3.77
532 560 5.332808 CGCTAACTAAACACACACCTACAAC 60.333 44.000 0.00 0.00 0.00 3.32
533 561 4.746115 CGCTAACTAAACACACACCTACAA 59.254 41.667 0.00 0.00 0.00 2.41
534 562 4.202141 ACGCTAACTAAACACACACCTACA 60.202 41.667 0.00 0.00 0.00 2.74
535 563 4.301628 ACGCTAACTAAACACACACCTAC 58.698 43.478 0.00 0.00 0.00 3.18
536 564 4.279169 AGACGCTAACTAAACACACACCTA 59.721 41.667 0.00 0.00 0.00 3.08
537 565 3.069158 AGACGCTAACTAAACACACACCT 59.931 43.478 0.00 0.00 0.00 4.00
538 566 3.387397 AGACGCTAACTAAACACACACC 58.613 45.455 0.00 0.00 0.00 4.16
579 607 3.682858 GCCTAGTTAATTGCGAACACTCA 59.317 43.478 0.00 0.00 0.00 3.41
584 612 4.083484 ACTGTTGCCTAGTTAATTGCGAAC 60.083 41.667 0.00 0.00 0.00 3.95
587 615 3.684788 AGACTGTTGCCTAGTTAATTGCG 59.315 43.478 0.00 0.00 0.00 4.85
589 617 5.182001 AGCAAGACTGTTGCCTAGTTAATTG 59.818 40.000 7.27 0.00 45.98 2.32
590 618 5.316987 AGCAAGACTGTTGCCTAGTTAATT 58.683 37.500 7.27 0.00 45.98 1.40
853 944 6.700081 CGATTTTCGGATTCCTATACTGTTGA 59.300 38.462 0.30 0.00 36.00 3.18
865 956 1.367665 CGCGGCGATTTTCGGATTC 60.368 57.895 19.16 0.00 40.84 2.52
918 1009 1.285280 TACTGAAGATGGGGTGGGTG 58.715 55.000 0.00 0.00 0.00 4.61
919 1010 2.286935 ATACTGAAGATGGGGTGGGT 57.713 50.000 0.00 0.00 0.00 4.51
922 1013 4.408921 TGGTTCTATACTGAAGATGGGGTG 59.591 45.833 0.00 0.00 0.00 4.61
923 1014 4.631234 TGGTTCTATACTGAAGATGGGGT 58.369 43.478 0.00 0.00 0.00 4.95
929 1020 6.713450 GGGTTGTTTTGGTTCTATACTGAAGA 59.287 38.462 0.00 0.00 0.00 2.87
936 1027 3.754323 CAGCGGGTTGTTTTGGTTCTATA 59.246 43.478 0.00 0.00 0.00 1.31
949 1040 2.106683 GGTTCGGATCAGCGGGTTG 61.107 63.158 0.00 0.00 0.00 3.77
1639 1798 7.575414 ATTACATAAACGATGGTTGGCAATA 57.425 32.000 1.92 0.00 40.18 1.90
1683 1842 3.005540 GCAGGGCAAACCGGAATGG 62.006 63.158 9.46 0.00 46.96 3.16
1769 1954 1.135721 GTACACACTTAGGTAGGGGCG 59.864 57.143 0.00 0.00 0.00 6.13
1902 2089 4.837860 ACCCAGCCTTCATCTATCTCTAAG 59.162 45.833 0.00 0.00 0.00 2.18
1964 2151 1.330655 TGGAGCTCAGGATTCGACCC 61.331 60.000 17.19 0.00 0.00 4.46
2008 2196 6.849588 AAAACAAAGGCATTGATCAGTTTC 57.150 33.333 9.74 0.00 41.85 2.78
2063 2251 4.504864 CGGCATTAATTCACTGATAGGGGA 60.505 45.833 0.00 0.00 0.00 4.81
2412 2600 8.050325 TGTAGTTGTATTAACAGGGCAACATAT 58.950 33.333 0.00 0.00 41.07 1.78
2440 2628 4.163427 TGCTAATCCTTATCCCTCTGGAG 58.837 47.826 0.00 0.00 46.08 3.86
2597 2785 5.986501 ACCTAGTCAAAGTCTTAGTCCAG 57.013 43.478 0.00 0.00 0.00 3.86
2918 3312 7.661040 CCTGTCCAAGAATAAAACATTTCACT 58.339 34.615 0.00 0.00 0.00 3.41
2990 3384 4.496507 GCCGGTTATTGAGATTTTGAGAGC 60.497 45.833 1.90 0.00 0.00 4.09
3089 3483 9.910511 CACTTTTTGTTCAGAAGAAATGAAATG 57.089 29.630 6.32 0.00 38.34 2.32
3107 3501 9.520204 AGAAAGTATGACATCAAACACTTTTTG 57.480 29.630 12.37 0.00 36.60 2.44
3165 3561 5.584649 TGGCATTCAACACTGCTAGTATTAC 59.415 40.000 0.00 0.00 38.45 1.89
3252 3648 7.499232 GCACCTACAGATACAAAGATTTACCAT 59.501 37.037 0.00 0.00 0.00 3.55
3271 3667 4.941873 AGCAACTAAAGTAATGGCACCTAC 59.058 41.667 0.00 0.00 0.00 3.18
3518 3914 8.893563 TGGTTTTATATCCAAGTTTTCAGGAT 57.106 30.769 0.00 0.00 44.09 3.24
3611 4007 1.202710 TGCAGTAACACAACATCCGGT 60.203 47.619 0.00 0.00 0.00 5.28
3647 4043 7.862372 TCAGCTTGAAAACAATCATCTGTAAAC 59.138 33.333 0.00 0.00 34.55 2.01
3693 4089 1.264557 CTCTACGGCCTACTCATCACG 59.735 57.143 0.00 0.00 0.00 4.35
3904 4301 4.559251 CGTTATGTGTGTCAGCTCTAAGTC 59.441 45.833 0.00 0.00 0.00 3.01
3906 4303 3.859961 CCGTTATGTGTGTCAGCTCTAAG 59.140 47.826 0.00 0.00 0.00 2.18
3949 4348 2.368439 TGCATGCTATTGGAACAGTCC 58.632 47.619 20.33 0.00 42.39 3.85
4465 5133 5.220681 CCGAAGAGAAATAACAAAGCTAGGC 60.221 44.000 0.00 0.00 0.00 3.93
4766 5438 2.533942 GGCGTGTTTTGTAAGCAAACAG 59.466 45.455 0.00 0.00 43.47 3.16
4771 5443 1.384525 ACAGGCGTGTTTTGTAAGCA 58.615 45.000 6.15 0.00 30.30 3.91
5440 6112 2.034221 AAGAGGCGTTTCAGGGGC 59.966 61.111 0.00 0.00 0.00 5.80
5604 6276 4.611366 GCAACTTGTTGCGTACTAATGTTC 59.389 41.667 20.36 0.00 38.26 3.18
5624 6296 1.955778 CACCACTTGGATCAACAGCAA 59.044 47.619 1.14 0.00 38.94 3.91
5637 6309 5.808366 TTAGTGTCTTCTGATCACCACTT 57.192 39.130 10.60 0.69 35.08 3.16
5745 6435 6.539826 TCACGTCTTGATATAAGAACGGACTA 59.460 38.462 0.00 0.00 0.00 2.59
5749 6439 7.326305 CCTTATCACGTCTTGATATAAGAACGG 59.674 40.741 0.25 0.00 45.02 4.44
5760 6453 0.539986 GGCCCCTTATCACGTCTTGA 59.460 55.000 0.00 0.00 39.11 3.02
6003 6699 6.826741 TGCCCTTATGGAAATTCTAGTTACAC 59.173 38.462 0.00 0.00 35.39 2.90
6105 6801 2.285818 ATCACCCCGGGCTGGTAA 60.286 61.111 17.73 0.00 33.84 2.85
6218 6928 0.179001 CCGTGGAGGTTCTTGGGTTT 60.179 55.000 0.00 0.00 34.51 3.27
6284 6994 1.210931 CAATGTGCAGTGAAGCCCG 59.789 57.895 0.00 0.00 0.00 6.13
6285 6995 0.524862 CTCAATGTGCAGTGAAGCCC 59.475 55.000 3.95 0.00 34.84 5.19
6286 6996 1.242076 ACTCAATGTGCAGTGAAGCC 58.758 50.000 3.95 0.00 34.84 4.35
6287 6997 3.070018 ACTACTCAATGTGCAGTGAAGC 58.930 45.455 3.95 0.00 34.84 3.86
6288 6998 4.512944 ACAACTACTCAATGTGCAGTGAAG 59.487 41.667 3.95 2.52 34.84 3.02
6289 6999 4.273235 CACAACTACTCAATGTGCAGTGAA 59.727 41.667 3.95 0.00 38.14 3.18
6290 7000 3.809279 CACAACTACTCAATGTGCAGTGA 59.191 43.478 0.00 2.38 38.14 3.41
6291 7001 4.137849 CACAACTACTCAATGTGCAGTG 57.862 45.455 0.00 0.00 38.14 3.66
6296 7006 2.412870 TCGGCACAACTACTCAATGTG 58.587 47.619 0.97 0.97 45.54 3.21
6297 7007 2.831685 TCGGCACAACTACTCAATGT 57.168 45.000 0.00 0.00 0.00 2.71
6298 7008 4.259810 CGTAATCGGCACAACTACTCAATG 60.260 45.833 0.00 0.00 0.00 2.82
6299 7009 3.863424 CGTAATCGGCACAACTACTCAAT 59.137 43.478 0.00 0.00 0.00 2.57
6300 7010 3.247442 CGTAATCGGCACAACTACTCAA 58.753 45.455 0.00 0.00 0.00 3.02
6301 7011 2.229543 ACGTAATCGGCACAACTACTCA 59.770 45.455 0.00 0.00 41.85 3.41
6302 7012 2.597305 CACGTAATCGGCACAACTACTC 59.403 50.000 0.00 0.00 41.85 2.59
6303 7013 2.229543 TCACGTAATCGGCACAACTACT 59.770 45.455 0.00 0.00 41.85 2.57
6304 7014 2.598589 TCACGTAATCGGCACAACTAC 58.401 47.619 0.00 0.00 41.85 2.73
6305 7015 3.300852 TTCACGTAATCGGCACAACTA 57.699 42.857 0.00 0.00 41.85 2.24
6306 7016 2.157834 TTCACGTAATCGGCACAACT 57.842 45.000 0.00 0.00 41.85 3.16
6307 7017 2.953640 TTTCACGTAATCGGCACAAC 57.046 45.000 0.00 0.00 41.85 3.32
6308 7018 3.365465 CCATTTTCACGTAATCGGCACAA 60.365 43.478 0.00 0.00 41.85 3.33
6309 7019 2.160615 CCATTTTCACGTAATCGGCACA 59.839 45.455 0.00 0.00 41.85 4.57
6310 7020 2.417239 TCCATTTTCACGTAATCGGCAC 59.583 45.455 0.00 0.00 41.85 5.01
6311 7021 2.417239 GTCCATTTTCACGTAATCGGCA 59.583 45.455 0.00 0.00 41.85 5.69
6312 7022 2.417239 TGTCCATTTTCACGTAATCGGC 59.583 45.455 0.00 0.00 41.85 5.54
6313 7023 4.671880 TTGTCCATTTTCACGTAATCGG 57.328 40.909 0.00 0.00 41.85 4.18
6314 7024 6.086241 CAGTTTTGTCCATTTTCACGTAATCG 59.914 38.462 0.00 0.00 43.34 3.34
6315 7025 6.362283 CCAGTTTTGTCCATTTTCACGTAATC 59.638 38.462 0.00 0.00 0.00 1.75
6316 7026 6.212955 CCAGTTTTGTCCATTTTCACGTAAT 58.787 36.000 0.00 0.00 0.00 1.89
6317 7027 5.583495 CCAGTTTTGTCCATTTTCACGTAA 58.417 37.500 0.00 0.00 0.00 3.18
6318 7028 4.498345 GCCAGTTTTGTCCATTTTCACGTA 60.498 41.667 0.00 0.00 0.00 3.57
6319 7029 3.736740 GCCAGTTTTGTCCATTTTCACGT 60.737 43.478 0.00 0.00 0.00 4.49
6320 7030 2.794350 GCCAGTTTTGTCCATTTTCACG 59.206 45.455 0.00 0.00 0.00 4.35
6321 7031 3.130633 GGCCAGTTTTGTCCATTTTCAC 58.869 45.455 0.00 0.00 0.00 3.18
6322 7032 2.103941 GGGCCAGTTTTGTCCATTTTCA 59.896 45.455 4.39 0.00 0.00 2.69
6323 7033 2.103941 TGGGCCAGTTTTGTCCATTTTC 59.896 45.455 0.00 0.00 0.00 2.29
6324 7034 2.122768 TGGGCCAGTTTTGTCCATTTT 58.877 42.857 0.00 0.00 0.00 1.82
6325 7035 1.799933 TGGGCCAGTTTTGTCCATTT 58.200 45.000 0.00 0.00 0.00 2.32
6326 7036 2.028561 ATGGGCCAGTTTTGTCCATT 57.971 45.000 13.78 0.00 34.70 3.16
6327 7037 2.917713 TATGGGCCAGTTTTGTCCAT 57.082 45.000 13.78 1.65 38.83 3.41
6328 7038 2.311542 AGATATGGGCCAGTTTTGTCCA 59.688 45.455 13.78 0.00 32.65 4.02
6329 7039 2.689983 CAGATATGGGCCAGTTTTGTCC 59.310 50.000 13.78 0.00 0.00 4.02
6330 7040 3.620488 TCAGATATGGGCCAGTTTTGTC 58.380 45.455 13.78 2.60 0.00 3.18
6331 7041 3.737559 TCAGATATGGGCCAGTTTTGT 57.262 42.857 13.78 0.00 0.00 2.83
6332 7042 4.463891 AGTTTCAGATATGGGCCAGTTTTG 59.536 41.667 13.78 7.52 0.00 2.44
6333 7043 4.677182 AGTTTCAGATATGGGCCAGTTTT 58.323 39.130 13.78 0.00 0.00 2.43
6334 7044 4.322057 AGTTTCAGATATGGGCCAGTTT 57.678 40.909 13.78 0.00 0.00 2.66
6335 7045 4.263905 TGAAGTTTCAGATATGGGCCAGTT 60.264 41.667 13.78 0.48 32.50 3.16
6336 7046 3.266772 TGAAGTTTCAGATATGGGCCAGT 59.733 43.478 13.78 2.47 32.50 4.00
6337 7047 3.889815 TGAAGTTTCAGATATGGGCCAG 58.110 45.455 13.78 0.00 32.50 4.85
6338 7048 4.016444 GTTGAAGTTTCAGATATGGGCCA 58.984 43.478 9.61 9.61 38.61 5.36
6339 7049 4.016444 TGTTGAAGTTTCAGATATGGGCC 58.984 43.478 0.00 0.00 38.61 5.80
6340 7050 4.458989 TGTGTTGAAGTTTCAGATATGGGC 59.541 41.667 0.00 0.00 38.61 5.36
6341 7051 6.573664 TTGTGTTGAAGTTTCAGATATGGG 57.426 37.500 0.00 0.00 38.61 4.00
6342 7052 8.918658 CATTTTGTGTTGAAGTTTCAGATATGG 58.081 33.333 0.00 0.00 38.61 2.74
6343 7053 8.918658 CCATTTTGTGTTGAAGTTTCAGATATG 58.081 33.333 0.00 0.00 38.61 1.78
6344 7054 7.599998 GCCATTTTGTGTTGAAGTTTCAGATAT 59.400 33.333 0.00 0.00 38.61 1.63
6345 7055 6.922957 GCCATTTTGTGTTGAAGTTTCAGATA 59.077 34.615 0.00 0.00 38.61 1.98
6346 7056 5.754890 GCCATTTTGTGTTGAAGTTTCAGAT 59.245 36.000 0.00 0.00 38.61 2.90
6347 7057 5.108517 GCCATTTTGTGTTGAAGTTTCAGA 58.891 37.500 0.00 0.00 38.61 3.27
6348 7058 4.270808 GGCCATTTTGTGTTGAAGTTTCAG 59.729 41.667 0.00 0.00 38.61 3.02
6349 7059 4.187694 GGCCATTTTGTGTTGAAGTTTCA 58.812 39.130 0.00 0.00 34.92 2.69
6350 7060 3.559655 GGGCCATTTTGTGTTGAAGTTTC 59.440 43.478 4.39 0.00 0.00 2.78
6351 7061 3.540617 GGGCCATTTTGTGTTGAAGTTT 58.459 40.909 4.39 0.00 0.00 2.66
6352 7062 2.158827 GGGGCCATTTTGTGTTGAAGTT 60.159 45.455 4.39 0.00 0.00 2.66
6353 7063 1.416030 GGGGCCATTTTGTGTTGAAGT 59.584 47.619 4.39 0.00 0.00 3.01
6354 7064 1.415659 TGGGGCCATTTTGTGTTGAAG 59.584 47.619 4.39 0.00 0.00 3.02
6355 7065 1.500474 TGGGGCCATTTTGTGTTGAA 58.500 45.000 4.39 0.00 0.00 2.69
6356 7066 1.500474 TTGGGGCCATTTTGTGTTGA 58.500 45.000 4.39 0.00 0.00 3.18
6357 7067 2.038820 AGATTGGGGCCATTTTGTGTTG 59.961 45.455 4.39 0.00 0.00 3.33
6358 7068 2.038820 CAGATTGGGGCCATTTTGTGTT 59.961 45.455 4.39 0.00 0.00 3.32
6359 7069 1.624813 CAGATTGGGGCCATTTTGTGT 59.375 47.619 4.39 0.00 0.00 3.72
6360 7070 1.901159 TCAGATTGGGGCCATTTTGTG 59.099 47.619 4.39 0.00 0.00 3.33
6361 7071 2.323999 TCAGATTGGGGCCATTTTGT 57.676 45.000 4.39 0.00 0.00 2.83
6362 7072 3.699411 TTTCAGATTGGGGCCATTTTG 57.301 42.857 4.39 0.00 0.00 2.44
6363 7073 4.720775 TTTTTCAGATTGGGGCCATTTT 57.279 36.364 4.39 0.00 0.00 1.82
6364 7074 4.932911 ATTTTTCAGATTGGGGCCATTT 57.067 36.364 4.39 0.00 0.00 2.32
6365 7075 4.932911 AATTTTTCAGATTGGGGCCATT 57.067 36.364 4.39 0.00 0.00 3.16
6366 7076 4.289148 TGAAATTTTTCAGATTGGGGCCAT 59.711 37.500 4.39 0.00 41.88 4.40
6367 7077 3.649981 TGAAATTTTTCAGATTGGGGCCA 59.350 39.130 4.39 0.00 41.88 5.36
6368 7078 4.002982 GTGAAATTTTTCAGATTGGGGCC 58.997 43.478 5.99 0.00 46.80 5.80
6369 7079 3.679502 CGTGAAATTTTTCAGATTGGGGC 59.320 43.478 5.99 0.00 46.80 5.80
6370 7080 5.132897 TCGTGAAATTTTTCAGATTGGGG 57.867 39.130 5.99 0.00 46.80 4.96
6371 7081 7.360269 CCATTTCGTGAAATTTTTCAGATTGGG 60.360 37.037 5.99 1.81 46.80 4.12
6372 7082 7.512297 CCATTTCGTGAAATTTTTCAGATTGG 58.488 34.615 5.99 10.84 46.80 3.16
6373 7083 7.011189 GCCATTTCGTGAAATTTTTCAGATTG 58.989 34.615 5.99 7.17 46.80 2.67
6374 7084 6.147656 GGCCATTTCGTGAAATTTTTCAGATT 59.852 34.615 5.99 0.00 46.80 2.40
6375 7085 5.639082 GGCCATTTCGTGAAATTTTTCAGAT 59.361 36.000 5.99 0.00 46.80 2.90
6376 7086 4.987912 GGCCATTTCGTGAAATTTTTCAGA 59.012 37.500 5.99 4.17 46.80 3.27
6377 7087 4.152223 GGGCCATTTCGTGAAATTTTTCAG 59.848 41.667 4.39 2.12 46.80 3.02
6378 7088 4.061596 GGGCCATTTCGTGAAATTTTTCA 58.938 39.130 4.39 1.66 44.31 2.69
6379 7089 4.314961 AGGGCCATTTCGTGAAATTTTTC 58.685 39.130 6.18 0.00 38.84 2.29
6380 7090 4.350368 AGGGCCATTTCGTGAAATTTTT 57.650 36.364 6.18 0.00 38.84 1.94
6381 7091 4.350368 AAGGGCCATTTCGTGAAATTTT 57.650 36.364 6.18 0.00 38.84 1.82
6382 7092 4.350368 AAAGGGCCATTTCGTGAAATTT 57.650 36.364 10.16 0.00 38.84 1.82
6383 7093 4.350368 AAAAGGGCCATTTCGTGAAATT 57.650 36.364 16.98 0.00 38.84 1.82
6384 7094 4.064388 CAAAAAGGGCCATTTCGTGAAAT 58.936 39.130 16.98 2.04 41.33 2.17
6385 7095 3.462021 CAAAAAGGGCCATTTCGTGAAA 58.538 40.909 16.98 0.00 34.46 2.69
6386 7096 2.804933 GCAAAAAGGGCCATTTCGTGAA 60.805 45.455 23.37 0.00 0.00 3.18
6387 7097 1.270041 GCAAAAAGGGCCATTTCGTGA 60.270 47.619 23.37 0.00 0.00 4.35
6388 7098 1.147473 GCAAAAAGGGCCATTTCGTG 58.853 50.000 16.98 17.40 0.00 4.35
6389 7099 0.755686 TGCAAAAAGGGCCATTTCGT 59.244 45.000 16.98 4.44 0.00 3.85
6390 7100 1.733360 CATGCAAAAAGGGCCATTTCG 59.267 47.619 16.98 11.59 0.00 3.46
6391 7101 2.743664 GTCATGCAAAAAGGGCCATTTC 59.256 45.455 16.98 4.40 0.00 2.17
6392 7102 2.781923 GTCATGCAAAAAGGGCCATTT 58.218 42.857 10.16 10.16 0.00 2.32
6393 7103 1.338011 CGTCATGCAAAAAGGGCCATT 60.338 47.619 6.18 0.00 0.00 3.16
6394 7104 0.247185 CGTCATGCAAAAAGGGCCAT 59.753 50.000 6.18 0.00 0.00 4.40
6395 7105 1.664873 CGTCATGCAAAAAGGGCCA 59.335 52.632 6.18 0.00 0.00 5.36
6396 7106 1.737735 GCGTCATGCAAAAAGGGCC 60.738 57.895 0.00 0.00 45.45 5.80
6397 7107 3.860717 GCGTCATGCAAAAAGGGC 58.139 55.556 0.00 0.00 45.45 5.19
6420 7130 2.177594 ATCTAGCATGGCGCCCTAGC 62.178 60.000 26.77 24.28 44.04 3.42
6421 7131 1.135915 CTATCTAGCATGGCGCCCTAG 59.864 57.143 26.77 25.32 44.04 3.02
6422 7132 1.186200 CTATCTAGCATGGCGCCCTA 58.814 55.000 26.77 17.07 44.04 3.53
6423 7133 1.548357 CCTATCTAGCATGGCGCCCT 61.548 60.000 26.77 16.82 44.04 5.19
6424 7134 1.078848 CCTATCTAGCATGGCGCCC 60.079 63.158 26.77 8.84 44.04 6.13
6425 7135 0.539051 ATCCTATCTAGCATGGCGCC 59.461 55.000 22.73 22.73 44.04 6.53
6426 7136 1.205655 TCATCCTATCTAGCATGGCGC 59.794 52.381 0.00 0.00 42.91 6.53
6427 7137 2.733542 CGTCATCCTATCTAGCATGGCG 60.734 54.545 1.17 1.17 37.94 5.69
6428 7138 2.886081 CGTCATCCTATCTAGCATGGC 58.114 52.381 0.00 0.00 0.00 4.40
6429 7139 2.417924 GGCGTCATCCTATCTAGCATGG 60.418 54.545 0.00 0.00 0.00 3.66
6430 7140 2.417924 GGGCGTCATCCTATCTAGCATG 60.418 54.545 0.00 0.00 0.00 4.06
6431 7141 1.827969 GGGCGTCATCCTATCTAGCAT 59.172 52.381 0.00 0.00 0.00 3.79
6432 7142 1.257743 GGGCGTCATCCTATCTAGCA 58.742 55.000 0.00 0.00 0.00 3.49
6433 7143 0.533032 GGGGCGTCATCCTATCTAGC 59.467 60.000 0.00 0.00 0.00 3.42
6434 7144 0.811915 CGGGGCGTCATCCTATCTAG 59.188 60.000 0.00 0.00 0.00 2.43
6435 7145 0.611062 CCGGGGCGTCATCCTATCTA 60.611 60.000 0.00 0.00 0.00 1.98
6436 7146 1.908793 CCGGGGCGTCATCCTATCT 60.909 63.158 0.00 0.00 0.00 1.98
6437 7147 2.657237 CCGGGGCGTCATCCTATC 59.343 66.667 0.00 0.00 0.00 2.08
6438 7148 2.923035 CCCGGGGCGTCATCCTAT 60.923 66.667 14.71 0.00 0.00 2.57
6451 7161 4.609018 CATGACGCCCTAGCCCGG 62.609 72.222 0.00 0.00 34.57 5.73
6453 7163 2.507854 TAGCATGACGCCCTAGCCC 61.508 63.158 0.00 0.00 44.04 5.19
6454 7164 1.301009 GTAGCATGACGCCCTAGCC 60.301 63.158 0.00 0.00 44.04 3.93
6455 7165 0.105039 AAGTAGCATGACGCCCTAGC 59.895 55.000 0.00 0.00 44.04 3.42
6456 7166 1.539065 CCAAGTAGCATGACGCCCTAG 60.539 57.143 0.00 0.00 44.04 3.02
6457 7167 0.464036 CCAAGTAGCATGACGCCCTA 59.536 55.000 0.00 0.00 44.04 3.53
6458 7168 1.221840 CCAAGTAGCATGACGCCCT 59.778 57.895 0.00 0.00 44.04 5.19
6459 7169 2.472909 GCCAAGTAGCATGACGCCC 61.473 63.158 0.00 0.00 44.04 6.13
6460 7170 1.745115 TGCCAAGTAGCATGACGCC 60.745 57.895 0.00 0.00 44.04 5.68
6461 7171 3.889227 TGCCAAGTAGCATGACGC 58.111 55.556 0.00 0.00 38.00 5.19
6492 7202 4.935495 ATGTAGCATGGCGCCCCG 62.935 66.667 26.77 16.48 44.04 5.73
6493 7203 3.289834 CATGTAGCATGGCGCCCC 61.290 66.667 26.77 12.64 44.04 5.80
6494 7204 2.516930 ACATGTAGCATGGCGCCC 60.517 61.111 26.77 8.84 44.04 6.13
6495 7205 2.885676 CGACATGTAGCATGGCGCC 61.886 63.158 22.73 22.73 43.99 6.53
6496 7206 2.628106 CGACATGTAGCATGGCGC 59.372 61.111 21.77 0.00 43.99 6.53
6498 7208 0.861837 GTAGCGACATGTAGCATGGC 59.138 55.000 29.04 13.95 33.49 4.40
6499 7209 1.202521 TGGTAGCGACATGTAGCATGG 60.203 52.381 29.04 3.37 33.49 3.66
6500 7210 2.223537 TGGTAGCGACATGTAGCATG 57.776 50.000 29.04 7.48 33.49 4.06
6501 7211 2.365293 TCATGGTAGCGACATGTAGCAT 59.635 45.455 29.04 17.40 44.57 3.79
6502 7212 1.754226 TCATGGTAGCGACATGTAGCA 59.246 47.619 29.04 15.95 44.57 3.49
6503 7213 2.128035 GTCATGGTAGCGACATGTAGC 58.872 52.381 21.79 21.79 44.57 3.58
6504 7214 2.223502 ACGTCATGGTAGCGACATGTAG 60.224 50.000 0.00 0.00 44.57 2.74
6505 7215 1.746787 ACGTCATGGTAGCGACATGTA 59.253 47.619 0.00 3.59 44.57 2.29
6506 7216 0.530744 ACGTCATGGTAGCGACATGT 59.469 50.000 0.00 0.00 44.57 3.21
6507 7217 1.200483 GACGTCATGGTAGCGACATG 58.800 55.000 11.55 10.73 45.39 3.21
6508 7218 0.102481 GGACGTCATGGTAGCGACAT 59.898 55.000 18.91 0.00 32.24 3.06
6509 7219 0.963856 AGGACGTCATGGTAGCGACA 60.964 55.000 18.91 0.00 32.24 4.35
6510 7220 1.002684 CTAGGACGTCATGGTAGCGAC 60.003 57.143 18.91 0.00 0.00 5.19
6511 7221 1.306148 CTAGGACGTCATGGTAGCGA 58.694 55.000 18.91 0.00 0.00 4.93
6512 7222 0.317938 GCTAGGACGTCATGGTAGCG 60.318 60.000 18.91 0.00 0.00 4.26
6513 7223 0.032267 GGCTAGGACGTCATGGTAGC 59.968 60.000 18.91 20.37 36.23 3.58
6514 7224 0.674534 GGGCTAGGACGTCATGGTAG 59.325 60.000 18.91 12.53 0.00 3.18
6515 7225 1.105167 CGGGCTAGGACGTCATGGTA 61.105 60.000 18.91 2.12 0.00 3.25
6516 7226 2.423898 CGGGCTAGGACGTCATGGT 61.424 63.158 18.91 0.90 0.00 3.55
6517 7227 2.417516 CGGGCTAGGACGTCATGG 59.582 66.667 18.91 14.10 0.00 3.66
6518 7228 2.417516 CCGGGCTAGGACGTCATG 59.582 66.667 18.91 7.57 0.00 3.07
6519 7229 2.838225 CCCGGGCTAGGACGTCAT 60.838 66.667 18.91 13.80 0.00 3.06
6532 7242 4.899239 GAGAGCATGACGCCCCGG 62.899 72.222 0.00 0.00 44.04 5.73
6533 7243 2.413437 CTAGAGAGCATGACGCCCCG 62.413 65.000 0.00 0.00 44.04 5.73
6534 7244 1.365633 CTAGAGAGCATGACGCCCC 59.634 63.158 0.00 0.00 44.04 5.80
6545 7255 2.295909 GCTAGGGTGTCATGCTAGAGAG 59.704 54.545 8.10 0.00 0.00 3.20
6546 7256 2.311463 GCTAGGGTGTCATGCTAGAGA 58.689 52.381 8.10 0.00 0.00 3.10
6547 7257 1.342819 GGCTAGGGTGTCATGCTAGAG 59.657 57.143 8.10 0.00 0.00 2.43
6548 7258 1.414158 GGCTAGGGTGTCATGCTAGA 58.586 55.000 8.10 0.00 0.00 2.43
6549 7259 0.394565 GGGCTAGGGTGTCATGCTAG 59.605 60.000 0.00 0.00 0.00 3.42
6550 7260 1.054406 GGGGCTAGGGTGTCATGCTA 61.054 60.000 0.00 0.00 0.00 3.49
6551 7261 2.378634 GGGGCTAGGGTGTCATGCT 61.379 63.158 0.00 0.00 0.00 3.79
6552 7262 2.193248 GGGGCTAGGGTGTCATGC 59.807 66.667 0.00 0.00 0.00 4.06
6553 7263 2.367202 ACGGGGCTAGGGTGTCATG 61.367 63.158 0.00 0.00 0.00 3.07
6554 7264 2.040606 ACGGGGCTAGGGTGTCAT 59.959 61.111 0.00 0.00 0.00 3.06
6555 7265 3.000819 CACGGGGCTAGGGTGTCA 61.001 66.667 0.00 0.00 0.00 3.58
6556 7266 4.468689 GCACGGGGCTAGGGTGTC 62.469 72.222 0.00 0.00 40.25 3.67
6561 7271 3.849951 ATGACGCACGGGGCTAGG 61.850 66.667 0.00 0.00 41.67 3.02
6562 7272 2.586079 CATGACGCACGGGGCTAG 60.586 66.667 0.00 0.00 41.67 3.42
6563 7273 4.830765 GCATGACGCACGGGGCTA 62.831 66.667 0.00 0.00 41.67 3.93
6572 7282 0.730494 GGCTCACTTTTGCATGACGC 60.730 55.000 0.00 0.00 42.89 5.19
6573 7283 0.592637 TGGCTCACTTTTGCATGACG 59.407 50.000 0.00 0.00 0.00 4.35
6574 7284 3.308438 AATGGCTCACTTTTGCATGAC 57.692 42.857 0.00 0.00 0.00 3.06
6575 7285 3.321396 TGAAATGGCTCACTTTTGCATGA 59.679 39.130 0.00 0.00 0.00 3.07
6576 7286 3.655486 TGAAATGGCTCACTTTTGCATG 58.345 40.909 0.00 0.00 0.00 4.06
6577 7287 4.020928 TCATGAAATGGCTCACTTTTGCAT 60.021 37.500 0.00 0.00 46.73 3.96
6578 7288 3.321396 TCATGAAATGGCTCACTTTTGCA 59.679 39.130 0.00 0.00 46.73 4.08
6579 7289 3.916761 TCATGAAATGGCTCACTTTTGC 58.083 40.909 0.00 0.00 46.73 3.68
6580 7290 8.712285 ATATTTCATGAAATGGCTCACTTTTG 57.288 30.769 33.94 0.00 46.73 2.44
6581 7291 9.729281 AAATATTTCATGAAATGGCTCACTTTT 57.271 25.926 33.94 19.51 46.73 2.27
6582 7292 9.729281 AAAATATTTCATGAAATGGCTCACTTT 57.271 25.926 33.94 18.36 46.73 2.66
6583 7293 9.374838 GAAAATATTTCATGAAATGGCTCACTT 57.625 29.630 33.94 20.08 46.73 3.16
6584 7294 8.533657 TGAAAATATTTCATGAAATGGCTCACT 58.466 29.630 33.94 15.59 46.73 3.41
6585 7295 8.706492 TGAAAATATTTCATGAAATGGCTCAC 57.294 30.769 33.94 22.49 46.73 3.51
6586 7296 8.751242 TCTGAAAATATTTCATGAAATGGCTCA 58.249 29.630 33.94 27.12 46.73 4.26
6587 7297 9.760077 ATCTGAAAATATTTCATGAAATGGCTC 57.240 29.630 33.94 24.99 46.73 4.70
6592 7302 9.841295 CCCCAATCTGAAAATATTTCATGAAAT 57.159 29.630 30.80 30.80 42.95 2.17
6593 7303 8.824783 ACCCCAATCTGAAAATATTTCATGAAA 58.175 29.630 22.52 22.52 34.46 2.69
6594 7304 8.378115 ACCCCAATCTGAAAATATTTCATGAA 57.622 30.769 3.38 3.38 0.00 2.57
6595 7305 7.618907 TGACCCCAATCTGAAAATATTTCATGA 59.381 33.333 0.10 0.00 0.00 3.07
6596 7306 7.784037 TGACCCCAATCTGAAAATATTTCATG 58.216 34.615 0.10 2.80 0.00 3.07
6597 7307 7.976414 TGACCCCAATCTGAAAATATTTCAT 57.024 32.000 0.10 0.00 0.00 2.57
6598 7308 7.976414 ATGACCCCAATCTGAAAATATTTCA 57.024 32.000 0.10 5.50 0.00 2.69
6599 7309 9.671279 AAAATGACCCCAATCTGAAAATATTTC 57.329 29.630 0.10 0.00 0.00 2.17
6600 7310 9.452287 CAAAATGACCCCAATCTGAAAATATTT 57.548 29.630 0.00 0.00 0.00 1.40
6601 7311 8.605065 ACAAAATGACCCCAATCTGAAAATATT 58.395 29.630 0.00 0.00 0.00 1.28
6602 7312 8.042515 CACAAAATGACCCCAATCTGAAAATAT 58.957 33.333 0.00 0.00 0.00 1.28
6603 7313 7.016072 ACACAAAATGACCCCAATCTGAAAATA 59.984 33.333 0.00 0.00 0.00 1.40
6604 7314 6.183361 ACACAAAATGACCCCAATCTGAAAAT 60.183 34.615 0.00 0.00 0.00 1.82
6605 7315 5.130145 ACACAAAATGACCCCAATCTGAAAA 59.870 36.000 0.00 0.00 0.00 2.29
6606 7316 4.653341 ACACAAAATGACCCCAATCTGAAA 59.347 37.500 0.00 0.00 0.00 2.69
6607 7317 4.222336 ACACAAAATGACCCCAATCTGAA 58.778 39.130 0.00 0.00 0.00 3.02
6608 7318 3.843422 ACACAAAATGACCCCAATCTGA 58.157 40.909 0.00 0.00 0.00 3.27
6609 7319 4.039004 TCAACACAAAATGACCCCAATCTG 59.961 41.667 0.00 0.00 0.00 2.90
6610 7320 4.222336 TCAACACAAAATGACCCCAATCT 58.778 39.130 0.00 0.00 0.00 2.40
6611 7321 4.599047 TCAACACAAAATGACCCCAATC 57.401 40.909 0.00 0.00 0.00 2.67
6612 7322 4.408596 ACTTCAACACAAAATGACCCCAAT 59.591 37.500 0.00 0.00 0.00 3.16
6613 7323 3.772025 ACTTCAACACAAAATGACCCCAA 59.228 39.130 0.00 0.00 0.00 4.12
6614 7324 3.370104 ACTTCAACACAAAATGACCCCA 58.630 40.909 0.00 0.00 0.00 4.96
6615 7325 4.400529 AACTTCAACACAAAATGACCCC 57.599 40.909 0.00 0.00 0.00 4.95
6616 7326 5.415221 TGAAACTTCAACACAAAATGACCC 58.585 37.500 0.00 0.00 33.55 4.46
6617 7327 6.959671 TTGAAACTTCAACACAAAATGACC 57.040 33.333 0.69 0.00 41.88 4.02
6620 7330 9.919348 CCTTATTTGAAACTTCAACACAAAATG 57.081 29.630 4.38 0.00 45.99 2.32
6621 7331 9.108284 CCCTTATTTGAAACTTCAACACAAAAT 57.892 29.630 4.38 0.00 45.99 1.82
6622 7332 7.065204 GCCCTTATTTGAAACTTCAACACAAAA 59.935 33.333 4.38 0.00 45.99 2.44
6623 7333 6.536941 GCCCTTATTTGAAACTTCAACACAAA 59.463 34.615 4.38 0.00 45.99 2.83
6624 7334 6.045955 GCCCTTATTTGAAACTTCAACACAA 58.954 36.000 4.38 0.00 45.99 3.33
6625 7335 5.362430 AGCCCTTATTTGAAACTTCAACACA 59.638 36.000 4.38 0.00 45.99 3.72
6626 7336 5.842907 AGCCCTTATTTGAAACTTCAACAC 58.157 37.500 4.38 0.00 45.99 3.32
6627 7337 7.001674 TCTAGCCCTTATTTGAAACTTCAACA 58.998 34.615 4.38 0.00 45.99 3.33
6628 7338 7.448748 TCTAGCCCTTATTTGAAACTTCAAC 57.551 36.000 4.38 0.00 45.99 3.18
6629 7339 8.650143 AATCTAGCCCTTATTTGAAACTTCAA 57.350 30.769 0.69 0.69 44.78 2.69
6630 7340 8.522830 CAAATCTAGCCCTTATTTGAAACTTCA 58.477 33.333 7.68 0.00 41.14 3.02
6631 7341 8.523658 ACAAATCTAGCCCTTATTTGAAACTTC 58.476 33.333 16.54 0.00 41.14 3.01
6632 7342 8.422577 ACAAATCTAGCCCTTATTTGAAACTT 57.577 30.769 16.54 0.00 41.14 2.66
6633 7343 8.422577 AACAAATCTAGCCCTTATTTGAAACT 57.577 30.769 16.54 0.00 41.14 2.66
6634 7344 8.303876 TGAACAAATCTAGCCCTTATTTGAAAC 58.696 33.333 16.54 9.73 41.14 2.78
6635 7345 8.415950 TGAACAAATCTAGCCCTTATTTGAAA 57.584 30.769 16.54 3.73 41.14 2.69
6636 7346 8.593945 ATGAACAAATCTAGCCCTTATTTGAA 57.406 30.769 16.54 6.19 41.14 2.69
6637 7347 8.593945 AATGAACAAATCTAGCCCTTATTTGA 57.406 30.769 16.54 0.66 41.14 2.69
6638 7348 9.657419 AAAATGAACAAATCTAGCCCTTATTTG 57.343 29.630 10.67 10.67 43.18 2.32
6639 7349 9.875691 GAAAATGAACAAATCTAGCCCTTATTT 57.124 29.630 0.00 0.00 0.00 1.40
6640 7350 9.034800 TGAAAATGAACAAATCTAGCCCTTATT 57.965 29.630 0.00 0.00 0.00 1.40
6641 7351 8.470002 GTGAAAATGAACAAATCTAGCCCTTAT 58.530 33.333 0.00 0.00 0.00 1.73
6642 7352 7.361713 CGTGAAAATGAACAAATCTAGCCCTTA 60.362 37.037 0.00 0.00 0.00 2.69
6643 7353 6.570378 CGTGAAAATGAACAAATCTAGCCCTT 60.570 38.462 0.00 0.00 0.00 3.95
6644 7354 5.106157 CGTGAAAATGAACAAATCTAGCCCT 60.106 40.000 0.00 0.00 0.00 5.19
6645 7355 5.095490 CGTGAAAATGAACAAATCTAGCCC 58.905 41.667 0.00 0.00 0.00 5.19
6646 7356 4.558860 GCGTGAAAATGAACAAATCTAGCC 59.441 41.667 0.00 0.00 0.00 3.93
6647 7357 4.558860 GGCGTGAAAATGAACAAATCTAGC 59.441 41.667 0.00 0.00 0.00 3.42
6648 7358 4.788100 CGGCGTGAAAATGAACAAATCTAG 59.212 41.667 0.00 0.00 0.00 2.43
6649 7359 4.452795 TCGGCGTGAAAATGAACAAATCTA 59.547 37.500 6.85 0.00 0.00 1.98
6650 7360 3.252215 TCGGCGTGAAAATGAACAAATCT 59.748 39.130 6.85 0.00 0.00 2.40
6651 7361 3.560503 TCGGCGTGAAAATGAACAAATC 58.439 40.909 6.85 0.00 0.00 2.17
6652 7362 3.634568 TCGGCGTGAAAATGAACAAAT 57.365 38.095 6.85 0.00 0.00 2.32
6653 7363 3.634568 ATCGGCGTGAAAATGAACAAA 57.365 38.095 6.85 0.00 0.00 2.83
6654 7364 3.634568 AATCGGCGTGAAAATGAACAA 57.365 38.095 6.85 0.00 0.00 2.83
6655 7365 3.749088 AGTAATCGGCGTGAAAATGAACA 59.251 39.130 6.85 0.00 0.00 3.18
6656 7366 4.336532 AGTAATCGGCGTGAAAATGAAC 57.663 40.909 6.85 0.00 0.00 3.18
6657 7367 5.813157 TGATAGTAATCGGCGTGAAAATGAA 59.187 36.000 6.85 0.00 34.60 2.57
6658 7368 5.353111 TGATAGTAATCGGCGTGAAAATGA 58.647 37.500 6.85 0.00 34.60 2.57
6659 7369 5.333339 CCTGATAGTAATCGGCGTGAAAATG 60.333 44.000 6.85 0.00 37.20 2.32
6660 7370 4.750098 CCTGATAGTAATCGGCGTGAAAAT 59.250 41.667 6.85 0.00 37.20 1.82
6661 7371 4.116961 CCTGATAGTAATCGGCGTGAAAA 58.883 43.478 6.85 0.00 37.20 2.29
6662 7372 3.382227 TCCTGATAGTAATCGGCGTGAAA 59.618 43.478 6.85 0.00 37.20 2.69
6663 7373 2.953648 TCCTGATAGTAATCGGCGTGAA 59.046 45.455 6.85 0.00 37.20 3.18
6664 7374 2.578786 TCCTGATAGTAATCGGCGTGA 58.421 47.619 6.85 0.00 37.20 4.35
6665 7375 3.364889 TTCCTGATAGTAATCGGCGTG 57.635 47.619 6.85 0.00 37.20 5.34
6666 7376 5.717078 TTATTCCTGATAGTAATCGGCGT 57.283 39.130 6.85 0.00 37.20 5.68
6667 7377 6.387465 TCTTTATTCCTGATAGTAATCGGCG 58.613 40.000 0.00 0.00 37.20 6.46
6668 7378 7.603651 TCTCTTTATTCCTGATAGTAATCGGC 58.396 38.462 0.00 0.00 37.20 5.54


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.