Multiple sequence alignment - TraesCS4D01G215200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G215200 chr4D 100.000 5447 0 0 1 5447 368874878 368869432 0.000000e+00 10059.0
1 TraesCS4D01G215200 chr4D 82.120 783 105 27 38 806 381392517 381391756 5.950000e-179 638.0
2 TraesCS4D01G215200 chr4A 94.034 2900 138 24 2030 4913 96016001 96018881 0.000000e+00 4364.0
3 TraesCS4D01G215200 chr4A 91.153 1232 73 17 809 2029 96014658 96015864 0.000000e+00 1639.0
4 TraesCS4D01G215200 chr4A 88.141 683 57 14 119 793 22531358 22530692 0.000000e+00 791.0
5 TraesCS4D01G215200 chr4A 85.135 148 20 2 4708 4855 136431522 136431377 3.400000e-32 150.0
6 TraesCS4D01G215200 chr4A 92.308 39 3 0 780 818 22530696 22530658 7.620000e-04 56.5
7 TraesCS4D01G215200 chr4B 92.849 2615 116 35 2510 5111 454040296 454037740 0.000000e+00 3727.0
8 TraesCS4D01G215200 chr4B 87.165 1231 82 27 809 2028 454042283 454041118 0.000000e+00 1328.0
9 TraesCS4D01G215200 chr4B 87.452 789 52 23 1 781 289050369 289051118 0.000000e+00 865.0
10 TraesCS4D01G215200 chr4B 92.638 489 26 5 2029 2511 454040983 454040499 0.000000e+00 695.0
11 TraesCS4D01G215200 chr5A 93.112 813 39 9 1 808 76233767 76234567 0.000000e+00 1175.0
12 TraesCS4D01G215200 chr5A 89.801 804 42 14 1 775 699073245 699072453 0.000000e+00 994.0
13 TraesCS4D01G215200 chr5A 91.494 435 27 9 1 430 76233102 76233531 1.690000e-164 590.0
14 TraesCS4D01G215200 chr5A 91.475 434 28 8 1 430 76232438 76232866 6.080000e-164 588.0
15 TraesCS4D01G215200 chr5A 89.693 456 36 10 1 450 76231189 76231639 6.120000e-159 571.0
16 TraesCS4D01G215200 chr5A 89.625 347 24 5 5107 5447 40619928 40620268 1.080000e-116 431.0
17 TraesCS4D01G215200 chr5A 83.125 160 22 4 4707 4862 641734282 641734124 2.050000e-29 141.0
18 TraesCS4D01G215200 chr6B 88.568 831 51 23 1 805 304094782 304095594 0.000000e+00 968.0
19 TraesCS4D01G215200 chr2A 86.517 801 75 20 22 810 446061253 446060474 0.000000e+00 850.0
20 TraesCS4D01G215200 chr2A 90.330 455 33 10 1 450 446061500 446061052 2.190000e-163 586.0
21 TraesCS4D01G215200 chr2D 83.565 718 77 23 119 808 635081842 635081138 7.700000e-178 634.0
22 TraesCS4D01G215200 chr2D 91.787 207 9 3 5162 5366 87364823 87364623 1.160000e-71 281.0
23 TraesCS4D01G215200 chrUn 91.264 435 28 9 1 430 366641672 366642101 7.860000e-163 584.0
24 TraesCS4D01G215200 chrUn 91.264 435 28 9 1 430 424359220 424358791 7.860000e-163 584.0
25 TraesCS4D01G215200 chr1D 97.771 314 7 0 5134 5447 227651652 227651965 4.800000e-150 542.0
26 TraesCS4D01G215200 chr1D 89.655 348 21 9 5106 5447 156136818 156137156 3.900000e-116 429.0
27 TraesCS4D01G215200 chr1B 78.893 777 115 38 42 805 648109045 648109785 1.060000e-131 481.0
28 TraesCS4D01G215200 chr5B 94.231 156 7 2 5106 5260 697179982 697179828 2.540000e-58 237.0
29 TraesCS4D01G215200 chr5B 93.233 133 8 1 5307 5438 697179823 697179691 1.550000e-45 195.0
30 TraesCS4D01G215200 chr7D 77.410 332 45 11 5132 5440 181643376 181643052 2.610000e-38 171.0
31 TraesCS4D01G215200 chr6A 87.075 147 16 2 4707 4851 184388177 184388322 4.370000e-36 163.0
32 TraesCS4D01G215200 chr3D 85.915 142 17 2 4707 4846 610875783 610875923 1.220000e-31 148.0
33 TraesCS4D01G215200 chr3D 85.315 143 19 1 4706 4846 92123276 92123134 4.400000e-31 147.0
34 TraesCS4D01G215200 chr3D 91.209 91 7 1 5169 5258 47346929 47346839 7.410000e-24 122.0
35 TraesCS4D01G215200 chr3A 76.124 356 44 25 5110 5445 725178385 725178719 1.220000e-31 148.0
36 TraesCS4D01G215200 chr3A 75.843 356 45 25 5110 5445 725162992 725163326 5.690000e-30 143.0
37 TraesCS4D01G215200 chr3B 85.315 143 19 1 4706 4846 141862440 141862298 4.400000e-31 147.0
38 TraesCS4D01G215200 chr1A 85.034 147 19 2 4707 4851 555641258 555641113 4.400000e-31 147.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G215200 chr4D 368869432 368874878 5446 True 10059.000000 10059 100.0000 1 5447 1 chr4D.!!$R1 5446
1 TraesCS4D01G215200 chr4D 381391756 381392517 761 True 638.000000 638 82.1200 38 806 1 chr4D.!!$R2 768
2 TraesCS4D01G215200 chr4A 96014658 96018881 4223 False 3001.500000 4364 92.5935 809 4913 2 chr4A.!!$F1 4104
3 TraesCS4D01G215200 chr4A 22530658 22531358 700 True 423.750000 791 90.2245 119 818 2 chr4A.!!$R2 699
4 TraesCS4D01G215200 chr4B 454037740 454042283 4543 True 1916.666667 3727 90.8840 809 5111 3 chr4B.!!$R1 4302
5 TraesCS4D01G215200 chr4B 289050369 289051118 749 False 865.000000 865 87.4520 1 781 1 chr4B.!!$F1 780
6 TraesCS4D01G215200 chr5A 699072453 699073245 792 True 994.000000 994 89.8010 1 775 1 chr5A.!!$R2 774
7 TraesCS4D01G215200 chr5A 76231189 76234567 3378 False 731.000000 1175 91.4435 1 808 4 chr5A.!!$F2 807
8 TraesCS4D01G215200 chr6B 304094782 304095594 812 False 968.000000 968 88.5680 1 805 1 chr6B.!!$F1 804
9 TraesCS4D01G215200 chr2A 446060474 446061500 1026 True 718.000000 850 88.4235 1 810 2 chr2A.!!$R1 809
10 TraesCS4D01G215200 chr2D 635081138 635081842 704 True 634.000000 634 83.5650 119 808 1 chr2D.!!$R2 689
11 TraesCS4D01G215200 chr1B 648109045 648109785 740 False 481.000000 481 78.8930 42 805 1 chr1B.!!$F1 763

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
669 3398 1.876714 GGCGAGCGCAGTATCGAAA 60.877 57.895 19.38 0.0 44.11 3.46 F
1361 4124 0.036010 GGTGGAGGAGGTCATGTGTG 60.036 60.000 0.00 0.0 0.00 3.82 F
2724 5838 0.112412 AGGCACCCCAACCTTGTAAG 59.888 55.000 0.00 0.0 29.74 2.34 F
4033 7149 0.250945 TCGAGTCAGAGCACCAGAGT 60.251 55.000 0.00 0.0 0.00 3.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1928 4696 0.040425 GGTACGCCAGTTTGCTGTTG 60.040 55.0 0.0 0.0 41.02 3.33 R
3118 6232 0.110238 CTGACATTGTTCCCGCAACG 60.110 55.0 0.0 0.0 37.90 4.10 R
4046 7162 0.679505 TAGTCTGTGTGGTGCAGGAC 59.320 55.0 0.0 0.0 34.89 3.85 R
5419 8551 0.249120 CCTGTTGACACCGCCATCTA 59.751 55.0 0.0 0.0 0.00 1.98 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
604 3333 4.341520 GTGAGGACGAGGGTTAGTATTCAT 59.658 45.833 0.00 0.00 0.00 2.57
609 3338 6.837568 AGGACGAGGGTTAGTATTCATAAGAA 59.162 38.462 0.00 0.00 38.31 2.52
669 3398 1.876714 GGCGAGCGCAGTATCGAAA 60.877 57.895 19.38 0.00 44.11 3.46
671 3400 1.917921 CGAGCGCAGTATCGAAACC 59.082 57.895 11.47 0.00 40.31 3.27
903 3650 2.027625 GAAACGTGGACTCGCTGGG 61.028 63.158 0.00 0.00 0.00 4.45
1164 3922 4.020617 CTTCCGGCAGCTCCACCA 62.021 66.667 0.00 0.00 34.01 4.17
1195 3953 4.746309 GCAGCCACCAGCCCATCA 62.746 66.667 0.00 0.00 45.47 3.07
1229 3987 0.912968 AGGTTGGTGCTACTACCCCC 60.913 60.000 7.85 0.00 40.09 5.40
1262 4020 1.168714 GTTGCCCAAAGTCTAGCTGG 58.831 55.000 0.00 0.00 0.00 4.85
1323 4086 0.113190 CTTCCCTGCTTGTTCCCCTT 59.887 55.000 0.00 0.00 0.00 3.95
1353 4116 2.442272 CGATCCGGTGGAGGAGGT 60.442 66.667 0.00 0.00 44.55 3.85
1355 4118 1.381327 GATCCGGTGGAGGAGGTCA 60.381 63.158 0.00 0.00 44.55 4.02
1356 4119 0.760945 GATCCGGTGGAGGAGGTCAT 60.761 60.000 0.00 0.00 44.55 3.06
1357 4120 1.050988 ATCCGGTGGAGGAGGTCATG 61.051 60.000 0.00 0.00 44.55 3.07
1358 4121 1.990060 CCGGTGGAGGAGGTCATGT 60.990 63.158 0.00 0.00 0.00 3.21
1359 4122 1.219124 CGGTGGAGGAGGTCATGTG 59.781 63.158 0.00 0.00 0.00 3.21
1360 4123 1.544825 CGGTGGAGGAGGTCATGTGT 61.545 60.000 0.00 0.00 0.00 3.72
1361 4124 0.036010 GGTGGAGGAGGTCATGTGTG 60.036 60.000 0.00 0.00 0.00 3.82
1362 4125 0.687354 GTGGAGGAGGTCATGTGTGT 59.313 55.000 0.00 0.00 0.00 3.72
1363 4126 1.899814 GTGGAGGAGGTCATGTGTGTA 59.100 52.381 0.00 0.00 0.00 2.90
1375 4142 4.975502 GTCATGTGTGTATGTGTGTTTTGG 59.024 41.667 0.00 0.00 0.00 3.28
1378 4145 6.318900 TCATGTGTGTATGTGTGTTTTGGTTA 59.681 34.615 0.00 0.00 0.00 2.85
1382 4149 5.297278 TGTGTATGTGTGTTTTGGTTACTCC 59.703 40.000 0.00 0.00 0.00 3.85
1414 4181 2.793288 TGGTTAATTTCGTCCCCTCC 57.207 50.000 0.00 0.00 0.00 4.30
1590 4358 4.345859 TCTGGTACGTTTCATTGGTTCT 57.654 40.909 0.00 0.00 0.00 3.01
1591 4359 4.062293 TCTGGTACGTTTCATTGGTTCTG 58.938 43.478 0.00 0.00 0.00 3.02
1600 4368 2.217750 TCATTGGTTCTGTTCGTGTGG 58.782 47.619 0.00 0.00 0.00 4.17
1609 4377 5.640357 GGTTCTGTTCGTGTGGTAATGATTA 59.360 40.000 0.00 0.00 0.00 1.75
1645 4413 6.293027 CCTGCTTAAAGCTTTCCAACATTTTG 60.293 38.462 16.57 0.00 42.97 2.44
1707 4475 1.304713 AGTGGGGGATTTGCTGCAG 60.305 57.895 10.11 10.11 0.00 4.41
1709 4477 1.304381 TGGGGGATTTGCTGCAGAC 60.304 57.895 20.43 9.67 0.00 3.51
1724 4492 0.901124 CAGACCTGTCCTGCTTAGCT 59.099 55.000 5.60 0.00 0.00 3.32
1730 4498 3.201290 CCTGTCCTGCTTAGCTATGTTG 58.799 50.000 5.60 2.31 0.00 3.33
1732 4500 3.861840 TGTCCTGCTTAGCTATGTTGTC 58.138 45.455 5.60 0.00 0.00 3.18
1733 4501 3.198872 GTCCTGCTTAGCTATGTTGTCC 58.801 50.000 5.60 0.00 0.00 4.02
1819 4587 7.009179 TCAATCATGAGAAGTTTAGTGTCCT 57.991 36.000 0.09 0.00 0.00 3.85
1847 4615 6.884836 CCCTAGTTAGTGCCTTGATAAAAGTT 59.115 38.462 0.00 0.00 0.00 2.66
1856 4624 7.814587 AGTGCCTTGATAAAAGTTAATTTCAGC 59.185 33.333 0.00 0.00 0.00 4.26
1857 4625 7.598493 GTGCCTTGATAAAAGTTAATTTCAGCA 59.402 33.333 0.00 0.00 0.00 4.41
1858 4626 8.147058 TGCCTTGATAAAAGTTAATTTCAGCAA 58.853 29.630 0.00 0.00 0.00 3.91
1859 4627 9.154847 GCCTTGATAAAAGTTAATTTCAGCAAT 57.845 29.630 0.00 0.00 0.00 3.56
1862 4630 9.651913 TTGATAAAAGTTAATTTCAGCAATCCC 57.348 29.630 0.00 0.00 0.00 3.85
1863 4631 8.257306 TGATAAAAGTTAATTTCAGCAATCCCC 58.743 33.333 0.00 0.00 0.00 4.81
1873 4641 4.864704 TCAGCAATCCCCTTTTAACAAC 57.135 40.909 0.00 0.00 0.00 3.32
1875 4643 3.254657 CAGCAATCCCCTTTTAACAACGA 59.745 43.478 0.00 0.00 0.00 3.85
1884 4652 5.054477 CCCTTTTAACAACGAGACTGAAGA 58.946 41.667 0.00 0.00 0.00 2.87
1904 4672 7.855375 TGAAGAACAGAGACTTCCATTCATAT 58.145 34.615 0.00 0.00 40.92 1.78
1905 4673 7.767659 TGAAGAACAGAGACTTCCATTCATATG 59.232 37.037 0.00 0.00 40.92 1.78
1920 4688 6.403964 CCATTCATATGAACCACAGAACACTG 60.404 42.308 20.19 9.74 36.80 3.66
2057 4965 5.647658 TGTGTCATAACTCAGGCTTAAATGG 59.352 40.000 0.00 0.00 0.00 3.16
2080 4988 6.473758 GGAACATTTCCTACACTAGAGGTTT 58.526 40.000 0.00 0.00 46.57 3.27
2094 5002 6.093219 CACTAGAGGTTTTGTGATCCAATCAG 59.907 42.308 0.00 0.00 40.53 2.90
2135 5043 6.492429 ACACATCTGGCAATATCATAAGCAAT 59.508 34.615 0.00 0.00 0.00 3.56
2185 5093 5.790593 TGTTTCTTGAACTAGTAAGCCGAT 58.209 37.500 0.00 0.00 39.08 4.18
2225 5133 1.137086 TCTAACTGCGAGGATCTTGGC 59.863 52.381 4.81 4.81 0.00 4.52
2255 5163 3.256704 TGGTACCCTCAAATCCTCAACT 58.743 45.455 10.07 0.00 0.00 3.16
2293 5203 4.120792 TGTTTCAGTGCATTTTTGCTCA 57.879 36.364 0.00 0.00 35.49 4.26
2300 5210 2.874086 GTGCATTTTTGCTCAGCCTTTT 59.126 40.909 0.00 0.00 35.49 2.27
2310 5220 5.806654 TGCTCAGCCTTTTCCTTTTTAAT 57.193 34.783 0.00 0.00 0.00 1.40
2390 5300 6.263344 CGGACGAAATATACAAGTCTTCTCA 58.737 40.000 0.00 0.00 32.86 3.27
2426 5336 2.302260 TCTGCCACACGGAATTTTCAA 58.698 42.857 0.00 0.00 0.00 2.69
2432 5342 4.615949 CCACACGGAATTTTCAAATGACA 58.384 39.130 0.00 0.00 0.00 3.58
2484 5394 6.607198 ACCAGTTTATAAGGTGAATCATTGGG 59.393 38.462 0.00 0.00 33.57 4.12
2549 5663 9.185680 TCACTGCTCATTAGTCATACTTTACTA 57.814 33.333 0.00 0.00 0.00 1.82
2580 5694 8.289618 TGTTCTCTTTTGGAAGAATGAATAACG 58.710 33.333 0.00 0.00 41.19 3.18
2724 5838 0.112412 AGGCACCCCAACCTTGTAAG 59.888 55.000 0.00 0.00 29.74 2.34
2855 5969 3.118408 ACTTGCACAAAGTCTGACCTGTA 60.118 43.478 11.48 0.00 46.60 2.74
3118 6232 1.059369 CACTCACATTAGCACGCGC 59.941 57.895 5.73 0.00 38.99 6.86
3147 6261 4.223032 GGGAACAATGTCAGTCCTCTCTAA 59.777 45.833 2.98 0.00 0.00 2.10
3158 6272 6.937465 GTCAGTCCTCTCTAAATCTTTTGGTT 59.063 38.462 0.00 0.00 0.00 3.67
3161 6275 8.722394 CAGTCCTCTCTAAATCTTTTGGTTTAC 58.278 37.037 0.00 0.00 0.00 2.01
3223 6337 8.044309 TGTAGATTTTCTCCGGAACAAATATCA 58.956 33.333 16.83 13.58 0.00 2.15
3227 6341 4.422073 TCTCCGGAACAAATATCATGCT 57.578 40.909 5.23 0.00 0.00 3.79
3237 6352 9.542462 GGAACAAATATCATGCTGTACTTACTA 57.458 33.333 0.00 0.00 0.00 1.82
3305 6420 5.425217 ACTTTTCTCCCAGTTGAACCAATTT 59.575 36.000 0.00 0.00 0.00 1.82
3306 6421 5.948742 TTTCTCCCAGTTGAACCAATTTT 57.051 34.783 0.00 0.00 0.00 1.82
3325 6440 2.618442 TGACTGTTGTGATGCTGTCA 57.382 45.000 0.00 0.00 39.86 3.58
3376 6491 8.106247 TCCATAACAACAAACTTCTATTGACC 57.894 34.615 0.00 0.00 0.00 4.02
3576 6691 2.457366 TTCACTTTCGCCTCTCCTTC 57.543 50.000 0.00 0.00 0.00 3.46
3581 6696 0.252284 TTTCGCCTCTCCTTCCTCCT 60.252 55.000 0.00 0.00 0.00 3.69
3582 6697 0.684805 TTCGCCTCTCCTTCCTCCTC 60.685 60.000 0.00 0.00 0.00 3.71
3583 6698 1.076339 CGCCTCTCCTTCCTCCTCT 60.076 63.158 0.00 0.00 0.00 3.69
3584 6699 1.106944 CGCCTCTCCTTCCTCCTCTC 61.107 65.000 0.00 0.00 0.00 3.20
3585 6700 0.759060 GCCTCTCCTTCCTCCTCTCC 60.759 65.000 0.00 0.00 0.00 3.71
3586 6701 0.933700 CCTCTCCTTCCTCCTCTCCT 59.066 60.000 0.00 0.00 0.00 3.69
3587 6702 1.290732 CCTCTCCTTCCTCCTCTCCTT 59.709 57.143 0.00 0.00 0.00 3.36
3588 6703 2.292851 CCTCTCCTTCCTCCTCTCCTTT 60.293 54.545 0.00 0.00 0.00 3.11
3589 6704 3.031013 CTCTCCTTCCTCCTCTCCTTTC 58.969 54.545 0.00 0.00 0.00 2.62
3590 6705 2.657459 TCTCCTTCCTCCTCTCCTTTCT 59.343 50.000 0.00 0.00 0.00 2.52
3591 6706 3.031013 CTCCTTCCTCCTCTCCTTTCTC 58.969 54.545 0.00 0.00 0.00 2.87
3592 6707 2.115427 CCTTCCTCCTCTCCTTTCTCC 58.885 57.143 0.00 0.00 0.00 3.71
3595 6710 4.551671 CTTCCTCCTCTCCTTTCTCCATA 58.448 47.826 0.00 0.00 0.00 2.74
3640 6756 5.557866 TCTTGATAGCTGCAGCATCATAAT 58.442 37.500 34.04 21.33 45.16 1.28
3645 6761 2.885266 AGCTGCAGCATCATAATTCTGG 59.115 45.455 38.24 0.00 45.16 3.86
3684 6800 1.043116 TCCCCATGGTAGACTCGCAG 61.043 60.000 11.73 0.00 0.00 5.18
4033 7149 0.250945 TCGAGTCAGAGCACCAGAGT 60.251 55.000 0.00 0.00 0.00 3.24
4039 7155 1.005630 AGAGCACCAGAGTCAACGC 60.006 57.895 0.00 0.00 0.00 4.84
4046 7162 4.379243 AGAGTCAACGCGGCTGGG 62.379 66.667 12.47 8.27 0.00 4.45
4064 7180 1.447643 GTCCTGCACCACACAGACT 59.552 57.895 0.00 0.00 37.32 3.24
4192 7308 1.444383 GATGCGTCGAGTGCTGACA 60.444 57.895 10.57 0.00 36.11 3.58
4199 7315 2.750948 GTCGAGTGCTGACAAGGTTTA 58.249 47.619 0.00 0.00 36.37 2.01
4267 7385 2.324541 GAGATACAGGATGCTGAGGGT 58.675 52.381 22.24 0.25 42.53 4.34
4355 7476 0.319555 GTGCTTGGTGTAGAGACGCA 60.320 55.000 0.00 0.00 37.85 5.24
4357 7478 1.281899 GCTTGGTGTAGAGACGCATC 58.718 55.000 0.00 0.00 37.85 3.91
4359 7480 0.885879 TTGGTGTAGAGACGCATCGT 59.114 50.000 0.00 0.00 45.10 3.73
4448 7570 0.952984 GAACAGCTCCCTCTGTGCAC 60.953 60.000 10.75 10.75 45.77 4.57
4546 7668 4.385825 TGATAAGTTTCTGCAGACCGTTT 58.614 39.130 18.03 11.08 0.00 3.60
4580 7702 5.600484 ACTTTTTGTTCATGGTGGGATGTTA 59.400 36.000 0.00 0.00 0.00 2.41
4585 7707 4.287326 TGTTCATGGTGGGATGTTACAGTA 59.713 41.667 0.00 0.00 0.00 2.74
4623 7745 2.136878 CGCACCTAGAGGAGCCCAT 61.137 63.158 11.76 0.00 46.97 4.00
4646 7768 3.565307 TGGAGCCAAATGTTTTCTCACT 58.435 40.909 0.00 0.00 0.00 3.41
4647 7769 3.960102 TGGAGCCAAATGTTTTCTCACTT 59.040 39.130 0.00 0.00 0.00 3.16
4651 7773 6.165700 AGCCAAATGTTTTCTCACTTGATT 57.834 33.333 0.00 0.00 0.00 2.57
4666 7788 8.131100 TCTCACTTGATTTTTGAATGACAGTTC 58.869 33.333 0.00 0.00 0.00 3.01
4670 7792 5.841810 TGATTTTTGAATGACAGTTCCACC 58.158 37.500 0.00 0.00 0.00 4.61
4733 7857 8.560903 ACTCCCTCCTTTCACAAATATAAGATT 58.439 33.333 0.00 0.00 0.00 2.40
4790 7917 7.175990 AGAGGTTTTAGTGTTTTTGTTCACTCA 59.824 33.333 1.08 0.00 42.77 3.41
4795 7922 9.698309 TTTTAGTGTTTTTGTTCACTCATTTCA 57.302 25.926 1.08 0.00 42.77 2.69
4800 7927 6.760770 TGTTTTTGTTCACTCATTTCAATCCC 59.239 34.615 0.00 0.00 0.00 3.85
4809 7936 7.004086 TCACTCATTTCAATCCCTTTGTAGTT 58.996 34.615 0.00 0.00 36.65 2.24
4853 7980 8.425577 ACATCTTATATTTGTGAACGAAGAGG 57.574 34.615 0.00 0.00 31.48 3.69
4938 8066 6.369340 CCAAATGATTTTGACATTGCAAGCTA 59.631 34.615 4.94 0.00 44.11 3.32
4999 8129 8.925700 GTCAATATGACAATATATGTTCTCGCA 58.074 33.333 5.65 0.00 46.22 5.10
5000 8130 9.487790 TCAATATGACAATATATGTTCTCGCAA 57.512 29.630 0.00 0.00 44.12 4.85
5071 8202 9.337396 TCTATATATTTGAATTCGGTGCAAGTT 57.663 29.630 0.04 0.00 0.00 2.66
5072 8203 9.950680 CTATATATTTGAATTCGGTGCAAGTTT 57.049 29.630 0.04 0.00 0.00 2.66
5074 8205 7.961325 ATATTTGAATTCGGTGCAAGTTTTT 57.039 28.000 0.04 0.00 0.00 1.94
5108 8240 5.065218 GTGAATTCGGTGCAAGTAGAATGAT 59.935 40.000 0.04 0.00 34.06 2.45
5109 8241 5.065090 TGAATTCGGTGCAAGTAGAATGATG 59.935 40.000 0.04 0.00 34.06 3.07
5110 8242 3.610040 TCGGTGCAAGTAGAATGATGT 57.390 42.857 0.00 0.00 0.00 3.06
5112 8244 5.079689 TCGGTGCAAGTAGAATGATGTTA 57.920 39.130 0.00 0.00 0.00 2.41
5113 8245 5.670485 TCGGTGCAAGTAGAATGATGTTAT 58.330 37.500 0.00 0.00 0.00 1.89
5114 8246 6.112734 TCGGTGCAAGTAGAATGATGTTATT 58.887 36.000 0.00 0.00 0.00 1.40
5115 8247 6.597672 TCGGTGCAAGTAGAATGATGTTATTT 59.402 34.615 0.00 0.00 0.00 1.40
5116 8248 7.120579 TCGGTGCAAGTAGAATGATGTTATTTT 59.879 33.333 0.00 0.00 0.00 1.82
5117 8249 7.218773 CGGTGCAAGTAGAATGATGTTATTTTG 59.781 37.037 0.00 0.00 0.00 2.44
5118 8250 7.009540 GGTGCAAGTAGAATGATGTTATTTTGC 59.990 37.037 0.00 0.00 33.71 3.68
5119 8251 7.756722 GTGCAAGTAGAATGATGTTATTTTGCT 59.243 33.333 0.00 0.00 34.00 3.91
5120 8252 7.756272 TGCAAGTAGAATGATGTTATTTTGCTG 59.244 33.333 0.00 0.00 34.00 4.41
5121 8253 7.253883 GCAAGTAGAATGATGTTATTTTGCTGC 60.254 37.037 0.00 0.00 31.90 5.25
5122 8254 6.489675 AGTAGAATGATGTTATTTTGCTGCG 58.510 36.000 0.00 0.00 0.00 5.18
5123 8255 4.675510 AGAATGATGTTATTTTGCTGCGG 58.324 39.130 0.00 0.00 0.00 5.69
5124 8256 4.158394 AGAATGATGTTATTTTGCTGCGGT 59.842 37.500 0.00 0.00 0.00 5.68
5125 8257 3.932545 TGATGTTATTTTGCTGCGGTT 57.067 38.095 0.00 0.00 0.00 4.44
5126 8258 4.250116 TGATGTTATTTTGCTGCGGTTT 57.750 36.364 0.00 0.00 0.00 3.27
5127 8259 4.233789 TGATGTTATTTTGCTGCGGTTTC 58.766 39.130 0.00 0.00 0.00 2.78
5128 8260 4.022416 TGATGTTATTTTGCTGCGGTTTCT 60.022 37.500 0.00 0.00 0.00 2.52
5129 8261 3.637432 TGTTATTTTGCTGCGGTTTCTG 58.363 40.909 0.00 0.00 0.00 3.02
5130 8262 3.067461 TGTTATTTTGCTGCGGTTTCTGT 59.933 39.130 0.00 0.00 0.00 3.41
5131 8263 2.888834 ATTTTGCTGCGGTTTCTGTT 57.111 40.000 0.00 0.00 0.00 3.16
5132 8264 5.216648 GTTATTTTGCTGCGGTTTCTGTTA 58.783 37.500 0.00 0.00 0.00 2.41
5133 8265 3.784701 TTTTGCTGCGGTTTCTGTTAA 57.215 38.095 0.00 0.00 0.00 2.01
5134 8266 4.314740 TTTTGCTGCGGTTTCTGTTAAT 57.685 36.364 0.00 0.00 0.00 1.40
5135 8267 5.440234 TTTTGCTGCGGTTTCTGTTAATA 57.560 34.783 0.00 0.00 0.00 0.98
5136 8268 5.440234 TTTGCTGCGGTTTCTGTTAATAA 57.560 34.783 0.00 0.00 0.00 1.40
5137 8269 4.413495 TGCTGCGGTTTCTGTTAATAAC 57.587 40.909 0.00 0.00 0.00 1.89
5138 8270 4.069304 TGCTGCGGTTTCTGTTAATAACT 58.931 39.130 4.67 0.00 0.00 2.24
5139 8271 5.239351 TGCTGCGGTTTCTGTTAATAACTA 58.761 37.500 4.67 0.00 0.00 2.24
5140 8272 5.121142 TGCTGCGGTTTCTGTTAATAACTAC 59.879 40.000 4.67 0.00 0.00 2.73
5141 8273 5.121142 GCTGCGGTTTCTGTTAATAACTACA 59.879 40.000 4.67 0.00 0.00 2.74
5142 8274 6.183360 GCTGCGGTTTCTGTTAATAACTACAT 60.183 38.462 4.67 0.00 0.00 2.29
5143 8275 7.067532 TGCGGTTTCTGTTAATAACTACATG 57.932 36.000 4.67 0.00 0.00 3.21
5144 8276 6.092944 TGCGGTTTCTGTTAATAACTACATGG 59.907 38.462 4.67 0.00 0.00 3.66
5145 8277 6.483687 CGGTTTCTGTTAATAACTACATGGC 58.516 40.000 4.67 0.00 0.00 4.40
5146 8278 6.457799 CGGTTTCTGTTAATAACTACATGGCC 60.458 42.308 0.00 0.00 0.00 5.36
5147 8279 6.457799 GGTTTCTGTTAATAACTACATGGCCG 60.458 42.308 4.67 0.00 0.00 6.13
5148 8280 5.601583 TCTGTTAATAACTACATGGCCGA 57.398 39.130 4.67 0.00 0.00 5.54
5149 8281 5.979993 TCTGTTAATAACTACATGGCCGAA 58.020 37.500 4.67 0.00 0.00 4.30
5150 8282 6.588204 TCTGTTAATAACTACATGGCCGAAT 58.412 36.000 4.67 0.00 0.00 3.34
5151 8283 7.728148 TCTGTTAATAACTACATGGCCGAATA 58.272 34.615 4.67 0.00 0.00 1.75
5152 8284 7.870954 TCTGTTAATAACTACATGGCCGAATAG 59.129 37.037 4.67 1.51 0.00 1.73
5153 8285 6.425721 TGTTAATAACTACATGGCCGAATAGC 59.574 38.462 4.67 0.00 0.00 2.97
5154 8286 4.617253 ATAACTACATGGCCGAATAGCA 57.383 40.909 0.00 0.00 0.00 3.49
5155 8287 2.240493 ACTACATGGCCGAATAGCAC 57.760 50.000 0.00 0.00 0.00 4.40
5156 8288 1.139989 CTACATGGCCGAATAGCACG 58.860 55.000 0.00 0.00 0.00 5.34
5157 8289 0.462375 TACATGGCCGAATAGCACGT 59.538 50.000 0.00 0.00 0.00 4.49
5158 8290 1.089481 ACATGGCCGAATAGCACGTG 61.089 55.000 12.28 12.28 0.00 4.49
5159 8291 2.180204 ATGGCCGAATAGCACGTGC 61.180 57.895 32.79 32.79 42.49 5.34
5173 8305 3.732943 GCACGTGCTAACTTATCAACAC 58.267 45.455 32.55 0.00 38.21 3.32
5174 8306 3.424433 GCACGTGCTAACTTATCAACACC 60.424 47.826 32.55 0.00 38.21 4.16
5175 8307 3.994392 CACGTGCTAACTTATCAACACCT 59.006 43.478 0.82 0.00 0.00 4.00
5176 8308 5.165676 CACGTGCTAACTTATCAACACCTA 58.834 41.667 0.82 0.00 0.00 3.08
5177 8309 5.636121 CACGTGCTAACTTATCAACACCTAA 59.364 40.000 0.82 0.00 0.00 2.69
5178 8310 6.146510 CACGTGCTAACTTATCAACACCTAAA 59.853 38.462 0.82 0.00 0.00 1.85
5179 8311 6.707161 ACGTGCTAACTTATCAACACCTAAAA 59.293 34.615 0.00 0.00 0.00 1.52
5180 8312 7.227116 ACGTGCTAACTTATCAACACCTAAAAA 59.773 33.333 0.00 0.00 0.00 1.94
5181 8313 7.744715 CGTGCTAACTTATCAACACCTAAAAAG 59.255 37.037 0.00 0.00 0.00 2.27
5182 8314 7.537649 GTGCTAACTTATCAACACCTAAAAAGC 59.462 37.037 0.00 0.00 0.00 3.51
5183 8315 7.229707 TGCTAACTTATCAACACCTAAAAAGCA 59.770 33.333 0.00 0.00 0.00 3.91
5184 8316 8.079809 GCTAACTTATCAACACCTAAAAAGCAA 58.920 33.333 0.00 0.00 0.00 3.91
5185 8317 9.394477 CTAACTTATCAACACCTAAAAAGCAAC 57.606 33.333 0.00 0.00 0.00 4.17
5186 8318 7.341445 ACTTATCAACACCTAAAAAGCAACA 57.659 32.000 0.00 0.00 0.00 3.33
5187 8319 7.951591 ACTTATCAACACCTAAAAAGCAACAT 58.048 30.769 0.00 0.00 0.00 2.71
5188 8320 8.082242 ACTTATCAACACCTAAAAAGCAACATC 58.918 33.333 0.00 0.00 0.00 3.06
5189 8321 5.843673 TCAACACCTAAAAAGCAACATCA 57.156 34.783 0.00 0.00 0.00 3.07
5190 8322 5.587289 TCAACACCTAAAAAGCAACATCAC 58.413 37.500 0.00 0.00 0.00 3.06
5191 8323 4.584327 ACACCTAAAAAGCAACATCACC 57.416 40.909 0.00 0.00 0.00 4.02
5192 8324 3.004315 ACACCTAAAAAGCAACATCACCG 59.996 43.478 0.00 0.00 0.00 4.94
5193 8325 2.556622 ACCTAAAAAGCAACATCACCGG 59.443 45.455 0.00 0.00 0.00 5.28
5194 8326 2.817258 CCTAAAAAGCAACATCACCGGA 59.183 45.455 9.46 0.00 0.00 5.14
5195 8327 3.443681 CCTAAAAAGCAACATCACCGGAT 59.556 43.478 9.46 0.00 0.00 4.18
5196 8328 4.082245 CCTAAAAAGCAACATCACCGGATT 60.082 41.667 9.46 0.00 0.00 3.01
5197 8329 5.124776 CCTAAAAAGCAACATCACCGGATTA 59.875 40.000 9.46 0.00 0.00 1.75
5198 8330 5.461032 AAAAAGCAACATCACCGGATTAA 57.539 34.783 9.46 0.00 0.00 1.40
5199 8331 5.659440 AAAAGCAACATCACCGGATTAAT 57.341 34.783 9.46 0.00 0.00 1.40
5200 8332 4.900635 AAGCAACATCACCGGATTAATC 57.099 40.909 9.46 6.93 0.00 1.75
5201 8333 3.884895 AGCAACATCACCGGATTAATCA 58.115 40.909 17.07 0.00 0.00 2.57
5202 8334 3.879295 AGCAACATCACCGGATTAATCAG 59.121 43.478 17.07 12.75 0.00 2.90
5203 8335 3.548818 GCAACATCACCGGATTAATCAGC 60.549 47.826 17.07 0.00 0.00 4.26
5204 8336 2.483876 ACATCACCGGATTAATCAGCG 58.516 47.619 17.07 11.63 0.00 5.18
5205 8337 2.158957 ACATCACCGGATTAATCAGCGT 60.159 45.455 17.07 10.05 0.00 5.07
5206 8338 1.934589 TCACCGGATTAATCAGCGTG 58.065 50.000 17.07 19.22 0.00 5.34
5207 8339 1.206132 TCACCGGATTAATCAGCGTGT 59.794 47.619 23.06 14.27 31.10 4.49
5208 8340 1.327460 CACCGGATTAATCAGCGTGTG 59.673 52.381 17.07 15.53 0.00 3.82
5209 8341 0.304705 CCGGATTAATCAGCGTGTGC 59.695 55.000 17.07 0.00 43.24 4.57
5221 8353 1.278238 GCGTGTGCTAGTGTATGACC 58.722 55.000 0.00 0.00 38.39 4.02
5222 8354 1.545759 CGTGTGCTAGTGTATGACCG 58.454 55.000 0.00 0.00 0.00 4.79
5223 8355 1.797713 CGTGTGCTAGTGTATGACCGG 60.798 57.143 0.00 0.00 0.00 5.28
5224 8356 1.475280 GTGTGCTAGTGTATGACCGGA 59.525 52.381 9.46 0.00 0.00 5.14
5225 8357 2.100916 GTGTGCTAGTGTATGACCGGAT 59.899 50.000 9.46 0.00 0.00 4.18
5226 8358 2.764010 TGTGCTAGTGTATGACCGGATT 59.236 45.455 9.46 0.00 0.00 3.01
5227 8359 3.955551 TGTGCTAGTGTATGACCGGATTA 59.044 43.478 9.46 0.00 0.00 1.75
5228 8360 4.403113 TGTGCTAGTGTATGACCGGATTAA 59.597 41.667 9.46 0.00 0.00 1.40
5229 8361 5.069914 TGTGCTAGTGTATGACCGGATTAAT 59.930 40.000 9.46 0.00 0.00 1.40
5230 8362 5.634020 GTGCTAGTGTATGACCGGATTAATC 59.366 44.000 9.46 6.93 0.00 1.75
5231 8363 5.303333 TGCTAGTGTATGACCGGATTAATCA 59.697 40.000 17.07 0.00 0.00 2.57
5232 8364 5.634020 GCTAGTGTATGACCGGATTAATCAC 59.366 44.000 17.07 10.18 0.00 3.06
5233 8365 4.957296 AGTGTATGACCGGATTAATCACC 58.043 43.478 17.07 0.49 0.00 4.02
5234 8366 4.654262 AGTGTATGACCGGATTAATCACCT 59.346 41.667 17.07 0.00 0.00 4.00
5235 8367 4.750098 GTGTATGACCGGATTAATCACCTG 59.250 45.833 17.07 4.81 0.00 4.00
5236 8368 2.325583 TGACCGGATTAATCACCTGC 57.674 50.000 17.07 3.28 0.00 4.85
5237 8369 1.557371 TGACCGGATTAATCACCTGCA 59.443 47.619 17.07 5.65 0.00 4.41
5238 8370 2.213499 GACCGGATTAATCACCTGCAG 58.787 52.381 17.07 6.78 0.00 4.41
5239 8371 0.947244 CCGGATTAATCACCTGCAGC 59.053 55.000 17.07 0.00 0.00 5.25
5240 8372 1.475751 CCGGATTAATCACCTGCAGCT 60.476 52.381 17.07 0.00 0.00 4.24
5241 8373 2.224281 CCGGATTAATCACCTGCAGCTA 60.224 50.000 17.07 0.00 0.00 3.32
5242 8374 2.802816 CGGATTAATCACCTGCAGCTAC 59.197 50.000 17.07 0.00 0.00 3.58
5243 8375 3.741075 CGGATTAATCACCTGCAGCTACA 60.741 47.826 17.07 0.00 0.00 2.74
5244 8376 4.392940 GGATTAATCACCTGCAGCTACAT 58.607 43.478 17.07 0.00 0.00 2.29
5245 8377 4.214971 GGATTAATCACCTGCAGCTACATG 59.785 45.833 17.07 1.03 0.00 3.21
5246 8378 2.048444 AATCACCTGCAGCTACATGG 57.952 50.000 8.66 0.00 0.00 3.66
5247 8379 0.465097 ATCACCTGCAGCTACATGGC 60.465 55.000 8.66 0.00 0.00 4.40
5248 8380 2.117156 CACCTGCAGCTACATGGCC 61.117 63.158 8.66 0.00 0.00 5.36
5249 8381 2.273123 CCTGCAGCTACATGGCCA 59.727 61.111 8.56 8.56 0.00 5.36
5250 8382 1.152819 CCTGCAGCTACATGGCCAT 60.153 57.895 14.09 14.09 0.00 4.40
5251 8383 1.452953 CCTGCAGCTACATGGCCATG 61.453 60.000 38.53 38.53 44.15 3.66
5252 8384 2.071844 CTGCAGCTACATGGCCATGC 62.072 60.000 39.74 28.87 42.39 4.06
5253 8385 2.122797 GCAGCTACATGGCCATGCA 61.123 57.895 39.74 29.41 42.39 3.96
5254 8386 1.731700 CAGCTACATGGCCATGCAC 59.268 57.895 39.74 29.28 42.39 4.57
5255 8387 1.820906 AGCTACATGGCCATGCACG 60.821 57.895 39.74 28.73 42.39 5.34
5256 8388 1.819208 GCTACATGGCCATGCACGA 60.819 57.895 39.74 23.59 42.39 4.35
5257 8389 1.779025 GCTACATGGCCATGCACGAG 61.779 60.000 39.74 30.44 42.39 4.18
5258 8390 0.462581 CTACATGGCCATGCACGAGT 60.463 55.000 39.74 24.34 42.39 4.18
5259 8391 0.461870 TACATGGCCATGCACGAGTC 60.462 55.000 39.74 0.00 42.39 3.36
5260 8392 1.746239 CATGGCCATGCACGAGTCA 60.746 57.895 31.95 0.00 31.39 3.41
5261 8393 1.002257 ATGGCCATGCACGAGTCAA 60.002 52.632 20.04 0.00 0.00 3.18
5262 8394 1.308069 ATGGCCATGCACGAGTCAAC 61.308 55.000 20.04 0.00 0.00 3.18
5263 8395 2.690778 GGCCATGCACGAGTCAACC 61.691 63.158 0.00 0.00 0.00 3.77
5264 8396 1.672356 GCCATGCACGAGTCAACCT 60.672 57.895 0.00 0.00 0.00 3.50
5265 8397 1.639298 GCCATGCACGAGTCAACCTC 61.639 60.000 0.00 0.00 36.80 3.85
5266 8398 1.021390 CCATGCACGAGTCAACCTCC 61.021 60.000 0.00 0.00 36.82 4.30
5267 8399 0.036952 CATGCACGAGTCAACCTCCT 60.037 55.000 0.00 0.00 36.82 3.69
5268 8400 0.036952 ATGCACGAGTCAACCTCCTG 60.037 55.000 0.00 0.00 36.82 3.86
5269 8401 1.367840 GCACGAGTCAACCTCCTGT 59.632 57.895 0.00 0.00 36.82 4.00
5270 8402 0.946221 GCACGAGTCAACCTCCTGTG 60.946 60.000 0.00 0.00 36.82 3.66
5271 8403 0.389391 CACGAGTCAACCTCCTGTGT 59.611 55.000 0.00 0.00 36.82 3.72
5272 8404 1.611977 CACGAGTCAACCTCCTGTGTA 59.388 52.381 0.00 0.00 36.82 2.90
5273 8405 1.612463 ACGAGTCAACCTCCTGTGTAC 59.388 52.381 0.00 0.00 36.82 2.90
5274 8406 1.401148 CGAGTCAACCTCCTGTGTACG 60.401 57.143 0.00 0.00 36.82 3.67
5275 8407 1.884579 GAGTCAACCTCCTGTGTACGA 59.115 52.381 0.00 0.00 33.79 3.43
5276 8408 1.887198 AGTCAACCTCCTGTGTACGAG 59.113 52.381 0.00 0.00 0.00 4.18
5277 8409 1.612463 GTCAACCTCCTGTGTACGAGT 59.388 52.381 0.00 0.00 0.00 4.18
5278 8410 1.611977 TCAACCTCCTGTGTACGAGTG 59.388 52.381 0.00 0.00 0.00 3.51
5279 8411 1.340248 CAACCTCCTGTGTACGAGTGT 59.660 52.381 0.00 0.00 0.00 3.55
5280 8412 0.959553 ACCTCCTGTGTACGAGTGTG 59.040 55.000 0.00 0.00 0.00 3.82
5281 8413 0.388649 CCTCCTGTGTACGAGTGTGC 60.389 60.000 0.00 0.00 0.00 4.57
5282 8414 0.598562 CTCCTGTGTACGAGTGTGCT 59.401 55.000 0.00 0.00 0.00 4.40
5283 8415 0.596577 TCCTGTGTACGAGTGTGCTC 59.403 55.000 0.00 0.00 38.35 4.26
5284 8416 0.388649 CCTGTGTACGAGTGTGCTCC 60.389 60.000 0.00 0.00 38.49 4.70
5285 8417 0.313987 CTGTGTACGAGTGTGCTCCA 59.686 55.000 0.00 0.00 38.49 3.86
5286 8418 0.747852 TGTGTACGAGTGTGCTCCAA 59.252 50.000 0.00 0.00 38.49 3.53
5287 8419 1.343142 TGTGTACGAGTGTGCTCCAAT 59.657 47.619 0.00 0.00 38.49 3.16
5288 8420 1.726791 GTGTACGAGTGTGCTCCAATG 59.273 52.381 0.00 0.00 38.49 2.82
5289 8421 1.616374 TGTACGAGTGTGCTCCAATGA 59.384 47.619 0.00 0.00 38.49 2.57
5290 8422 1.993370 GTACGAGTGTGCTCCAATGAC 59.007 52.381 0.00 0.00 38.49 3.06
5291 8423 0.320771 ACGAGTGTGCTCCAATGACC 60.321 55.000 0.00 0.00 38.49 4.02
5292 8424 0.320683 CGAGTGTGCTCCAATGACCA 60.321 55.000 0.00 0.00 38.49 4.02
5293 8425 1.877680 CGAGTGTGCTCCAATGACCAA 60.878 52.381 0.00 0.00 38.49 3.67
5294 8426 2.440409 GAGTGTGCTCCAATGACCAAT 58.560 47.619 0.00 0.00 35.76 3.16
5295 8427 2.421424 GAGTGTGCTCCAATGACCAATC 59.579 50.000 0.00 0.00 35.76 2.67
5296 8428 2.040813 AGTGTGCTCCAATGACCAATCT 59.959 45.455 0.00 0.00 0.00 2.40
5297 8429 3.264193 AGTGTGCTCCAATGACCAATCTA 59.736 43.478 0.00 0.00 0.00 1.98
5298 8430 4.080129 AGTGTGCTCCAATGACCAATCTAT 60.080 41.667 0.00 0.00 0.00 1.98
5299 8431 4.641989 GTGTGCTCCAATGACCAATCTATT 59.358 41.667 0.00 0.00 0.00 1.73
5300 8432 5.126061 GTGTGCTCCAATGACCAATCTATTT 59.874 40.000 0.00 0.00 0.00 1.40
5301 8433 6.318648 GTGTGCTCCAATGACCAATCTATTTA 59.681 38.462 0.00 0.00 0.00 1.40
5302 8434 6.543465 TGTGCTCCAATGACCAATCTATTTAG 59.457 38.462 0.00 0.00 0.00 1.85
5303 8435 5.532406 TGCTCCAATGACCAATCTATTTAGC 59.468 40.000 0.00 0.00 0.00 3.09
5304 8436 5.532406 GCTCCAATGACCAATCTATTTAGCA 59.468 40.000 0.00 0.00 0.00 3.49
5305 8437 6.039717 GCTCCAATGACCAATCTATTTAGCAA 59.960 38.462 0.00 0.00 0.00 3.91
5306 8438 7.572523 TCCAATGACCAATCTATTTAGCAAG 57.427 36.000 0.00 0.00 0.00 4.01
5307 8439 6.039717 TCCAATGACCAATCTATTTAGCAAGC 59.960 38.462 0.00 0.00 0.00 4.01
5308 8440 6.040166 CCAATGACCAATCTATTTAGCAAGCT 59.960 38.462 0.00 0.00 0.00 3.74
5309 8441 7.229306 CCAATGACCAATCTATTTAGCAAGCTA 59.771 37.037 0.00 0.00 0.00 3.32
5310 8442 7.976135 ATGACCAATCTATTTAGCAAGCTAG 57.024 36.000 1.68 0.00 0.00 3.42
5311 8443 5.760253 TGACCAATCTATTTAGCAAGCTAGC 59.240 40.000 6.62 6.62 0.00 3.42
5313 8445 6.360618 ACCAATCTATTTAGCAAGCTAGCTT 58.639 36.000 24.42 24.42 43.70 3.74
5314 8446 6.830838 ACCAATCTATTTAGCAAGCTAGCTTT 59.169 34.615 27.34 16.49 43.70 3.51
5315 8447 7.137426 CCAATCTATTTAGCAAGCTAGCTTTG 58.863 38.462 27.34 21.44 43.70 2.77
5316 8448 7.201767 CCAATCTATTTAGCAAGCTAGCTTTGT 60.202 37.037 27.34 18.70 43.70 2.83
5317 8449 7.872113 ATCTATTTAGCAAGCTAGCTTTGTT 57.128 32.000 27.34 20.49 43.70 2.83
5318 8450 7.308782 TCTATTTAGCAAGCTAGCTTTGTTC 57.691 36.000 27.34 15.70 43.70 3.18
5319 8451 4.404507 TTTAGCAAGCTAGCTTTGTTCG 57.595 40.909 27.34 16.36 43.70 3.95
5320 8452 2.169832 AGCAAGCTAGCTTTGTTCGA 57.830 45.000 27.34 0.00 43.70 3.71
5321 8453 2.072298 AGCAAGCTAGCTTTGTTCGAG 58.928 47.619 27.34 14.94 43.70 4.04
5322 8454 2.069273 GCAAGCTAGCTTTGTTCGAGA 58.931 47.619 27.34 0.00 33.42 4.04
5323 8455 2.675348 GCAAGCTAGCTTTGTTCGAGAT 59.325 45.455 27.34 0.00 33.42 2.75
5324 8456 3.484886 GCAAGCTAGCTTTGTTCGAGATG 60.485 47.826 27.34 13.70 33.42 2.90
5325 8457 3.601443 AGCTAGCTTTGTTCGAGATGT 57.399 42.857 12.68 0.00 0.00 3.06
5326 8458 3.257393 AGCTAGCTTTGTTCGAGATGTG 58.743 45.455 12.68 0.00 0.00 3.21
5327 8459 2.222908 GCTAGCTTTGTTCGAGATGTGC 60.223 50.000 7.70 0.00 0.00 4.57
5328 8460 1.882912 AGCTTTGTTCGAGATGTGCA 58.117 45.000 0.00 0.00 0.00 4.57
5329 8461 1.802960 AGCTTTGTTCGAGATGTGCAG 59.197 47.619 0.00 0.00 0.00 4.41
5330 8462 1.800586 GCTTTGTTCGAGATGTGCAGA 59.199 47.619 0.00 0.00 0.00 4.26
5331 8463 2.224079 GCTTTGTTCGAGATGTGCAGAA 59.776 45.455 0.00 0.00 0.00 3.02
5332 8464 3.303990 GCTTTGTTCGAGATGTGCAGAAA 60.304 43.478 0.00 0.00 0.00 2.52
5333 8465 3.878086 TTGTTCGAGATGTGCAGAAAC 57.122 42.857 0.00 0.00 0.00 2.78
5334 8466 3.111853 TGTTCGAGATGTGCAGAAACT 57.888 42.857 0.00 0.00 0.00 2.66
5335 8467 4.251543 TGTTCGAGATGTGCAGAAACTA 57.748 40.909 0.00 0.00 0.00 2.24
5336 8468 4.820897 TGTTCGAGATGTGCAGAAACTAT 58.179 39.130 0.00 0.00 0.00 2.12
5337 8469 5.237815 TGTTCGAGATGTGCAGAAACTATT 58.762 37.500 0.00 0.00 0.00 1.73
5338 8470 5.348724 TGTTCGAGATGTGCAGAAACTATTC 59.651 40.000 0.00 0.00 35.70 1.75
5339 8471 4.105486 TCGAGATGTGCAGAAACTATTCG 58.895 43.478 0.00 0.00 40.63 3.34
5340 8472 3.243877 CGAGATGTGCAGAAACTATTCGG 59.756 47.826 0.00 0.00 40.63 4.30
5347 8479 3.747099 CAGAAACTATTCGGCAACCAG 57.253 47.619 0.00 0.00 40.63 4.00
5348 8480 3.074412 CAGAAACTATTCGGCAACCAGT 58.926 45.455 0.00 0.00 40.63 4.00
5349 8481 3.074412 AGAAACTATTCGGCAACCAGTG 58.926 45.455 0.00 0.00 40.63 3.66
5350 8482 2.851263 AACTATTCGGCAACCAGTGA 57.149 45.000 0.00 0.00 0.00 3.41
5351 8483 2.851263 ACTATTCGGCAACCAGTGAA 57.149 45.000 0.00 0.00 0.00 3.18
5352 8484 3.350219 ACTATTCGGCAACCAGTGAAT 57.650 42.857 0.00 0.00 35.40 2.57
5353 8485 3.686016 ACTATTCGGCAACCAGTGAATT 58.314 40.909 0.00 0.00 33.42 2.17
5354 8486 3.689649 ACTATTCGGCAACCAGTGAATTC 59.310 43.478 0.00 0.00 33.42 2.17
5355 8487 1.974265 TTCGGCAACCAGTGAATTCA 58.026 45.000 3.38 3.38 0.00 2.57
5356 8488 2.198827 TCGGCAACCAGTGAATTCAT 57.801 45.000 12.12 0.00 0.00 2.57
5357 8489 2.513753 TCGGCAACCAGTGAATTCATT 58.486 42.857 12.12 4.21 0.00 2.57
5358 8490 3.680490 TCGGCAACCAGTGAATTCATTA 58.320 40.909 12.12 0.00 0.00 1.90
5359 8491 4.269183 TCGGCAACCAGTGAATTCATTAT 58.731 39.130 12.12 0.00 0.00 1.28
5360 8492 5.432645 TCGGCAACCAGTGAATTCATTATA 58.567 37.500 12.12 0.00 0.00 0.98
5361 8493 5.883115 TCGGCAACCAGTGAATTCATTATAA 59.117 36.000 12.12 0.00 0.00 0.98
5362 8494 6.375736 TCGGCAACCAGTGAATTCATTATAAA 59.624 34.615 12.12 0.00 0.00 1.40
5363 8495 7.032580 CGGCAACCAGTGAATTCATTATAAAA 58.967 34.615 12.12 0.00 0.00 1.52
5364 8496 7.706179 CGGCAACCAGTGAATTCATTATAAAAT 59.294 33.333 12.12 0.00 0.00 1.82
5386 8518 9.698309 AAAATATACAACAGATAGATGAGTCGG 57.302 33.333 0.00 0.00 0.00 4.79
5387 8519 3.444703 ACAACAGATAGATGAGTCGGC 57.555 47.619 0.00 0.00 0.00 5.54
5388 8520 2.223595 ACAACAGATAGATGAGTCGGCG 60.224 50.000 0.00 0.00 0.00 6.46
5389 8521 0.955178 ACAGATAGATGAGTCGGCGG 59.045 55.000 7.21 0.00 0.00 6.13
5390 8522 0.387878 CAGATAGATGAGTCGGCGGC 60.388 60.000 1.71 1.71 0.00 6.53
5391 8523 1.080434 GATAGATGAGTCGGCGGCC 60.080 63.158 8.37 9.54 0.00 6.13
5406 8538 3.799755 GCCGCGGCGACTGATTTT 61.800 61.111 37.24 0.00 0.00 1.82
5407 8539 2.399611 CCGCGGCGACTGATTTTC 59.600 61.111 25.92 0.00 0.00 2.29
5408 8540 2.100631 CCGCGGCGACTGATTTTCT 61.101 57.895 25.92 0.00 0.00 2.52
5409 8541 0.804544 CCGCGGCGACTGATTTTCTA 60.805 55.000 25.92 0.00 0.00 2.10
5410 8542 0.996462 CGCGGCGACTGATTTTCTAA 59.004 50.000 19.16 0.00 0.00 2.10
5411 8543 1.593006 CGCGGCGACTGATTTTCTAAT 59.407 47.619 19.16 0.00 0.00 1.73
5412 8544 2.347661 CGCGGCGACTGATTTTCTAATC 60.348 50.000 19.16 0.00 40.50 1.75
5413 8545 2.607635 GCGGCGACTGATTTTCTAATCA 59.392 45.455 12.98 0.00 45.99 2.57
5424 8556 7.468922 TGATTTTCTAATCAGTGCGTAGATG 57.531 36.000 4.13 0.00 43.93 2.90
5425 8557 6.479990 TGATTTTCTAATCAGTGCGTAGATGG 59.520 38.462 4.13 0.00 43.93 3.51
5426 8558 3.371102 TCTAATCAGTGCGTAGATGGC 57.629 47.619 0.00 0.00 0.00 4.40
5427 8559 2.054363 CTAATCAGTGCGTAGATGGCG 58.946 52.381 0.00 0.00 0.00 5.69
5428 8560 0.530650 AATCAGTGCGTAGATGGCGG 60.531 55.000 0.00 0.00 0.00 6.13
5429 8561 1.676678 ATCAGTGCGTAGATGGCGGT 61.677 55.000 0.00 0.00 0.00 5.68
5430 8562 2.167219 CAGTGCGTAGATGGCGGTG 61.167 63.158 0.00 0.00 0.00 4.94
5431 8563 2.125673 GTGCGTAGATGGCGGTGT 60.126 61.111 0.00 0.00 0.00 4.16
5432 8564 2.165301 GTGCGTAGATGGCGGTGTC 61.165 63.158 0.00 0.00 0.00 3.67
5433 8565 2.183300 GCGTAGATGGCGGTGTCA 59.817 61.111 0.00 0.00 0.00 3.58
5434 8566 1.447140 GCGTAGATGGCGGTGTCAA 60.447 57.895 0.00 0.00 0.00 3.18
5435 8567 1.693083 GCGTAGATGGCGGTGTCAAC 61.693 60.000 0.00 0.00 0.00 3.18
5436 8568 0.389296 CGTAGATGGCGGTGTCAACA 60.389 55.000 0.00 0.00 0.00 3.33
5437 8569 1.359848 GTAGATGGCGGTGTCAACAG 58.640 55.000 0.00 0.00 0.00 3.16
5438 8570 0.249120 TAGATGGCGGTGTCAACAGG 59.751 55.000 0.00 0.00 0.00 4.00
5439 8571 2.672996 ATGGCGGTGTCAACAGGC 60.673 61.111 0.00 0.00 45.40 4.85
5440 8572 3.196207 ATGGCGGTGTCAACAGGCT 62.196 57.895 7.54 0.00 45.40 4.58
5441 8573 2.594592 GGCGGTGTCAACAGGCTT 60.595 61.111 6.20 0.00 42.56 4.35
5442 8574 1.302192 GGCGGTGTCAACAGGCTTA 60.302 57.895 6.20 0.00 42.56 3.09
5443 8575 1.298859 GGCGGTGTCAACAGGCTTAG 61.299 60.000 6.20 0.00 42.56 2.18
5444 8576 1.912371 GCGGTGTCAACAGGCTTAGC 61.912 60.000 0.00 0.00 0.00 3.09
5445 8577 0.602638 CGGTGTCAACAGGCTTAGCA 60.603 55.000 6.53 0.00 0.00 3.49
5446 8578 0.875059 GGTGTCAACAGGCTTAGCAC 59.125 55.000 6.53 0.00 0.00 4.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
430 3133 4.664150 TGTTTCTCAAATTTGGTGACCC 57.336 40.909 17.90 9.64 0.00 4.46
529 3243 9.594478 TCCTTTTCTTTTTGTCATTTAGTTTCC 57.406 29.630 0.00 0.00 0.00 3.13
604 3333 4.214545 CCACCACGCTAACAACATTTCTTA 59.785 41.667 0.00 0.00 0.00 2.10
609 3338 1.975660 ACCACCACGCTAACAACATT 58.024 45.000 0.00 0.00 0.00 2.71
662 3391 2.809706 CGGCGAGGGGTTTCGATA 59.190 61.111 0.00 0.00 43.03 2.92
671 3400 3.625082 AAAAATTGCGCGGCGAGGG 62.625 57.895 28.54 0.00 0.00 4.30
903 3650 3.561120 TTGACCATGTGACCCGCCC 62.561 63.158 0.00 0.00 0.00 6.13
1149 3907 3.329542 GATTGGTGGAGCTGCCGGA 62.330 63.158 5.05 0.00 40.66 5.14
1181 3939 1.826921 CAGATGATGGGCTGGTGGC 60.827 63.158 0.00 0.00 40.90 5.01
1183 3941 0.818445 GAGCAGATGATGGGCTGGTG 60.818 60.000 0.00 0.00 42.32 4.17
1190 3948 0.033228 GGTCGAGGAGCAGATGATGG 59.967 60.000 0.00 0.00 0.00 3.51
1249 4007 5.482908 ACACTAATCACCAGCTAGACTTTG 58.517 41.667 0.00 0.00 0.00 2.77
1262 4020 2.267188 TGTACGGCGACACTAATCAC 57.733 50.000 16.62 0.00 0.00 3.06
1349 4112 3.664107 ACACACATACACACATGACCTC 58.336 45.455 0.00 0.00 0.00 3.85
1353 4116 4.642437 ACCAAAACACACATACACACATGA 59.358 37.500 0.00 0.00 0.00 3.07
1355 4118 5.590530 AACCAAAACACACATACACACAT 57.409 34.783 0.00 0.00 0.00 3.21
1356 4119 5.648526 AGTAACCAAAACACACATACACACA 59.351 36.000 0.00 0.00 0.00 3.72
1357 4120 6.126568 AGTAACCAAAACACACATACACAC 57.873 37.500 0.00 0.00 0.00 3.82
1358 4121 5.297278 GGAGTAACCAAAACACACATACACA 59.703 40.000 0.00 0.00 38.79 3.72
1359 4122 5.297278 TGGAGTAACCAAAACACACATACAC 59.703 40.000 0.00 0.00 46.75 2.90
1360 4123 5.437946 TGGAGTAACCAAAACACACATACA 58.562 37.500 0.00 0.00 46.75 2.29
1375 4142 2.941453 TCTCAGCACGATGGAGTAAC 57.059 50.000 0.00 0.00 0.00 2.50
1382 4149 5.490139 AAATTAACCATCTCAGCACGATG 57.510 39.130 0.00 3.69 38.35 3.84
1434 4201 2.289565 CCTTTATCCGAAGCCAGTTCC 58.710 52.381 0.00 0.00 0.00 3.62
1590 4358 8.100508 TCAATTTAATCATTACCACACGAACA 57.899 30.769 0.00 0.00 0.00 3.18
1609 4377 7.709149 AAGCTTTAAGCAGGACTATCAATTT 57.291 32.000 19.63 0.00 45.56 1.82
1645 4413 9.543018 CAAGTATGTTCTTAAAATTCGAAGACC 57.457 33.333 3.35 0.00 34.32 3.85
1674 4442 3.834231 CCCCCACTCTTTTCATGTCAAAT 59.166 43.478 0.00 0.00 0.00 2.32
1707 4475 2.432510 ACATAGCTAAGCAGGACAGGTC 59.567 50.000 0.00 0.00 0.00 3.85
1709 4477 3.201290 CAACATAGCTAAGCAGGACAGG 58.799 50.000 0.00 0.00 0.00 4.00
1768 4536 7.606456 GTCCCTCTGTAACACTTGAATAATTGA 59.394 37.037 0.00 0.00 0.00 2.57
1796 4564 7.678947 AAGGACACTAAACTTCTCATGATTG 57.321 36.000 0.00 0.00 0.00 2.67
1800 4568 5.412904 GGGAAAGGACACTAAACTTCTCATG 59.587 44.000 0.00 0.00 0.00 3.07
1808 4576 6.872547 CACTAACTAGGGAAAGGACACTAAAC 59.127 42.308 0.00 0.00 0.00 2.01
1814 4582 2.570302 GGCACTAACTAGGGAAAGGACA 59.430 50.000 0.00 0.00 0.00 4.02
1817 4585 3.263425 TCAAGGCACTAACTAGGGAAAGG 59.737 47.826 0.00 0.00 38.49 3.11
1819 4587 6.630203 TTATCAAGGCACTAACTAGGGAAA 57.370 37.500 0.00 0.00 38.49 3.13
1847 4615 7.546250 TGTTAAAAGGGGATTGCTGAAATTA 57.454 32.000 0.00 0.00 0.00 1.40
1850 4618 5.606505 GTTGTTAAAAGGGGATTGCTGAAA 58.393 37.500 0.00 0.00 0.00 2.69
1851 4619 4.261825 CGTTGTTAAAAGGGGATTGCTGAA 60.262 41.667 0.00 0.00 0.00 3.02
1852 4620 3.254657 CGTTGTTAAAAGGGGATTGCTGA 59.745 43.478 0.00 0.00 0.00 4.26
1853 4621 3.254657 TCGTTGTTAAAAGGGGATTGCTG 59.745 43.478 0.00 0.00 0.00 4.41
1854 4622 3.492337 TCGTTGTTAAAAGGGGATTGCT 58.508 40.909 0.00 0.00 0.00 3.91
1855 4623 3.504520 TCTCGTTGTTAAAAGGGGATTGC 59.495 43.478 0.00 0.00 0.00 3.56
1856 4624 4.760204 AGTCTCGTTGTTAAAAGGGGATTG 59.240 41.667 0.00 0.00 0.00 2.67
1857 4625 4.760204 CAGTCTCGTTGTTAAAAGGGGATT 59.240 41.667 0.00 0.00 0.00 3.01
1858 4626 4.041198 TCAGTCTCGTTGTTAAAAGGGGAT 59.959 41.667 0.00 0.00 0.00 3.85
1859 4627 3.388676 TCAGTCTCGTTGTTAAAAGGGGA 59.611 43.478 0.00 0.00 0.00 4.81
1860 4628 3.735591 TCAGTCTCGTTGTTAAAAGGGG 58.264 45.455 0.00 0.00 0.00 4.79
1861 4629 5.054477 TCTTCAGTCTCGTTGTTAAAAGGG 58.946 41.667 0.00 0.00 0.00 3.95
1862 4630 6.036735 TGTTCTTCAGTCTCGTTGTTAAAAGG 59.963 38.462 0.00 0.00 0.00 3.11
1863 4631 7.000575 TGTTCTTCAGTCTCGTTGTTAAAAG 57.999 36.000 0.00 0.00 0.00 2.27
1873 4641 4.472286 GAAGTCTCTGTTCTTCAGTCTCG 58.528 47.826 0.00 0.00 43.97 4.04
1875 4643 4.219115 TGGAAGTCTCTGTTCTTCAGTCT 58.781 43.478 7.12 0.00 43.97 3.24
1884 4652 6.825721 GGTTCATATGAATGGAAGTCTCTGTT 59.174 38.462 20.65 0.00 36.33 3.16
1920 4688 3.383761 CCAGTTTGCTGTTGGAATTCAC 58.616 45.455 7.93 0.00 41.02 3.18
1928 4696 0.040425 GGTACGCCAGTTTGCTGTTG 60.040 55.000 0.00 0.00 41.02 3.33
1942 4710 7.424227 TCCTGTTACAAAACATTAAGGTACG 57.576 36.000 0.00 0.00 44.43 3.67
1972 4740 6.876789 TGAAAAAGCCGACAAACATCTAGATA 59.123 34.615 4.54 0.00 0.00 1.98
2057 4965 7.444487 ACAAAACCTCTAGTGTAGGAAATGTTC 59.556 37.037 3.05 0.00 37.57 3.18
2080 4988 7.629157 TGGTATAGTTTCTGATTGGATCACAA 58.371 34.615 0.00 0.00 44.54 3.33
2094 5002 6.258727 CCAGATGTGTGTCATGGTATAGTTTC 59.741 42.308 0.00 0.00 36.83 2.78
2213 5121 1.140852 TGGTTATGGCCAAGATCCTCG 59.859 52.381 10.96 0.00 35.25 4.63
2237 5145 8.331931 ACATTATAGTTGAGGATTTGAGGGTA 57.668 34.615 0.00 0.00 0.00 3.69
2293 5203 5.303259 TGGCAATTAAAAAGGAAAAGGCT 57.697 34.783 0.00 0.00 0.00 4.58
2300 5210 9.985730 GATATCATCATTGGCAATTAAAAAGGA 57.014 29.630 10.65 3.25 0.00 3.36
2310 5220 6.358991 TCAGAGTTGATATCATCATTGGCAA 58.641 36.000 14.67 0.68 39.39 4.52
2343 5253 4.946157 GGATCTTGATAATACATGGCCTGG 59.054 45.833 3.32 0.00 0.00 4.45
2390 5300 5.827797 TGTGGCAGATTTCAACTCTTTTAGT 59.172 36.000 0.00 0.00 41.49 2.24
2426 5336 1.337074 CGGCCAATGCAGTTTGTCATT 60.337 47.619 2.24 0.00 40.13 2.57
2432 5342 2.573083 CCCACGGCCAATGCAGTTT 61.573 57.895 2.24 0.00 43.70 2.66
2484 5394 3.522553 AGTAAGAAGGCAGCAATACGAC 58.477 45.455 0.00 0.00 0.00 4.34
2549 5663 6.550854 TCATTCTTCCAAAAGAGAACATTGGT 59.449 34.615 3.92 0.00 42.36 3.67
2580 5694 2.027100 CCCTAAGTGAAGGAGAACCACC 60.027 54.545 0.00 0.00 39.15 4.61
2610 5724 0.469705 TGCAACTTGGGTGCCATCTT 60.470 50.000 5.08 0.00 31.53 2.40
2683 5797 6.072838 GCCTGACATTTGATATGACATCGATT 60.073 38.462 0.00 0.00 0.00 3.34
2724 5838 0.242017 GACACAGCAACCAATGAGCC 59.758 55.000 0.00 0.00 0.00 4.70
3046 6160 7.256296 CCAAAATCTCCAATTTTAGGAACCAGT 60.256 37.037 0.00 0.00 34.08 4.00
3118 6232 0.110238 CTGACATTGTTCCCGCAACG 60.110 55.000 0.00 0.00 37.90 4.10
3158 6272 9.116067 ACTCACACTGTAAAAGCAAATAAGTAA 57.884 29.630 0.00 0.00 0.00 2.24
3165 6279 7.148154 ACACATAACTCACACTGTAAAAGCAAA 60.148 33.333 0.00 0.00 0.00 3.68
3223 6337 9.811995 TTTCATCGTTAATAGTAAGTACAGCAT 57.188 29.630 0.00 0.00 0.00 3.79
3227 6341 9.642327 TTGCTTTCATCGTTAATAGTAAGTACA 57.358 29.630 0.00 0.00 0.00 2.90
3255 6370 5.298777 ACTGAAGGCAGCTGATTGAAATATC 59.701 40.000 20.43 2.39 46.26 1.63
3305 6420 2.916640 TGACAGCATCACAACAGTCAA 58.083 42.857 0.00 0.00 33.55 3.18
3306 6421 2.618442 TGACAGCATCACAACAGTCA 57.382 45.000 0.00 0.00 34.02 3.41
3354 6469 9.965824 CAAAGGTCAATAGAAGTTTGTTGTTAT 57.034 29.630 0.00 0.00 29.99 1.89
3359 6474 5.507315 CCGCAAAGGTCAATAGAAGTTTGTT 60.507 40.000 0.00 0.00 33.96 2.83
3376 6491 4.244066 CAGGAGAGATCATATCCGCAAAG 58.756 47.826 0.00 0.00 44.59 2.77
3576 6691 3.647636 TGTATGGAGAAAGGAGAGGAGG 58.352 50.000 0.00 0.00 0.00 4.30
3581 6696 6.688922 GCATGGTATTGTATGGAGAAAGGAGA 60.689 42.308 0.00 0.00 0.00 3.71
3582 6697 5.471456 GCATGGTATTGTATGGAGAAAGGAG 59.529 44.000 0.00 0.00 0.00 3.69
3583 6698 5.132648 AGCATGGTATTGTATGGAGAAAGGA 59.867 40.000 0.00 0.00 0.00 3.36
3584 6699 5.380043 AGCATGGTATTGTATGGAGAAAGG 58.620 41.667 0.00 0.00 0.00 3.11
3585 6700 6.319658 ACAAGCATGGTATTGTATGGAGAAAG 59.680 38.462 0.00 0.00 37.85 2.62
3586 6701 6.186957 ACAAGCATGGTATTGTATGGAGAAA 58.813 36.000 0.00 0.00 37.85 2.52
3587 6702 5.754782 ACAAGCATGGTATTGTATGGAGAA 58.245 37.500 0.00 0.00 37.85 2.87
3588 6703 5.372343 ACAAGCATGGTATTGTATGGAGA 57.628 39.130 0.00 0.00 37.85 3.71
3595 6710 6.418101 AGAGTTCATACAAGCATGGTATTGT 58.582 36.000 7.35 7.35 42.15 2.71
3640 6756 1.140312 AGGACTCTTTGTGCCCAGAA 58.860 50.000 0.00 0.00 37.77 3.02
3645 6761 3.942115 GGAAATCTAGGACTCTTTGTGCC 59.058 47.826 0.00 0.00 37.77 5.01
3684 6800 3.254166 GGATCACCATCACCAATATGTGC 59.746 47.826 0.00 0.00 34.73 4.57
3926 7042 1.153353 GGACGGCGTTTTGAAGATCA 58.847 50.000 16.19 0.00 0.00 2.92
4046 7162 0.679505 TAGTCTGTGTGGTGCAGGAC 59.320 55.000 0.00 0.00 34.89 3.85
4064 7180 9.371136 CTAAAATTACAGCTGTTCATGTCTCTA 57.629 33.333 27.06 0.00 0.00 2.43
4151 7267 1.576577 ACCTCATGGCACTCTGATGA 58.423 50.000 0.00 0.00 36.63 2.92
4192 7308 8.567104 GCAATTTTCCATTTCAACATAAACCTT 58.433 29.630 0.00 0.00 0.00 3.50
4199 7315 8.618702 TTATGTGCAATTTTCCATTTCAACAT 57.381 26.923 0.00 0.00 0.00 2.71
4267 7385 3.264947 CAGCAGCAATTCACAGCTACTA 58.735 45.455 0.00 0.00 39.50 1.82
4355 7476 4.270084 CCAACGACATAATGCTTGTACGAT 59.730 41.667 0.00 0.00 0.00 3.73
4357 7478 3.615056 TCCAACGACATAATGCTTGTACG 59.385 43.478 0.00 0.00 0.00 3.67
4359 7480 3.621268 GCTCCAACGACATAATGCTTGTA 59.379 43.478 0.00 0.00 0.00 2.41
4435 7557 1.407437 GGGTTATGTGCACAGAGGGAG 60.407 57.143 25.84 0.00 0.00 4.30
4442 7564 2.635427 TGTGACTAGGGTTATGTGCACA 59.365 45.455 24.08 24.08 33.18 4.57
4526 7648 7.101054 TGTATAAACGGTCTGCAGAAACTTAT 58.899 34.615 20.19 18.88 0.00 1.73
4528 7650 5.302360 TGTATAAACGGTCTGCAGAAACTT 58.698 37.500 20.19 11.85 0.00 2.66
4646 7768 6.098124 AGGTGGAACTGTCATTCAAAAATCAA 59.902 34.615 0.00 0.00 36.74 2.57
4647 7769 5.598005 AGGTGGAACTGTCATTCAAAAATCA 59.402 36.000 0.00 0.00 36.74 2.57
4651 7773 4.916983 CAGGTGGAACTGTCATTCAAAA 57.083 40.909 0.00 0.00 36.74 2.44
4666 7788 3.954258 AGTTTTTCTTTCCTGACAGGTGG 59.046 43.478 21.06 12.01 36.53 4.61
4670 7792 6.442513 ACAGAAGTTTTTCTTTCCTGACAG 57.557 37.500 0.00 0.00 41.71 3.51
4778 7905 6.729690 AGGGATTGAAATGAGTGAACAAAA 57.270 33.333 0.00 0.00 0.00 2.44
4845 7972 2.233271 TCGTTTCAGTACCCTCTTCGT 58.767 47.619 0.00 0.00 0.00 3.85
4891 8019 9.906660 TTTGGTGTTGACAATATATCTTTGTTC 57.093 29.630 5.67 1.89 37.43 3.18
5040 8171 9.760660 GCACCGAATTCAAATATATAGATGAAC 57.239 33.333 12.64 4.18 34.88 3.18
5074 8205 3.491792 GCACCGAATTCACCCTTCAAAAA 60.492 43.478 6.22 0.00 0.00 1.94
5075 8206 2.035321 GCACCGAATTCACCCTTCAAAA 59.965 45.455 6.22 0.00 0.00 2.44
5077 8208 1.243902 GCACCGAATTCACCCTTCAA 58.756 50.000 6.22 0.00 0.00 2.69
5108 8240 3.067461 ACAGAAACCGCAGCAAAATAACA 59.933 39.130 0.00 0.00 0.00 2.41
5109 8241 3.638484 ACAGAAACCGCAGCAAAATAAC 58.362 40.909 0.00 0.00 0.00 1.89
5110 8242 4.314740 AACAGAAACCGCAGCAAAATAA 57.685 36.364 0.00 0.00 0.00 1.40
5112 8244 2.888834 AACAGAAACCGCAGCAAAAT 57.111 40.000 0.00 0.00 0.00 1.82
5113 8245 3.784701 TTAACAGAAACCGCAGCAAAA 57.215 38.095 0.00 0.00 0.00 2.44
5114 8246 5.009210 AGTTATTAACAGAAACCGCAGCAAA 59.991 36.000 9.15 0.00 0.00 3.68
5115 8247 4.517453 AGTTATTAACAGAAACCGCAGCAA 59.483 37.500 9.15 0.00 0.00 3.91
5116 8248 4.069304 AGTTATTAACAGAAACCGCAGCA 58.931 39.130 9.15 0.00 0.00 4.41
5117 8249 4.680171 AGTTATTAACAGAAACCGCAGC 57.320 40.909 9.15 0.00 0.00 5.25
5118 8250 6.715344 TGTAGTTATTAACAGAAACCGCAG 57.285 37.500 9.15 0.00 0.00 5.18
5119 8251 6.092944 CCATGTAGTTATTAACAGAAACCGCA 59.907 38.462 9.15 0.00 0.00 5.69
5120 8252 6.483687 CCATGTAGTTATTAACAGAAACCGC 58.516 40.000 9.15 0.00 0.00 5.68
5121 8253 6.457799 GGCCATGTAGTTATTAACAGAAACCG 60.458 42.308 9.15 0.00 0.00 4.44
5122 8254 6.457799 CGGCCATGTAGTTATTAACAGAAACC 60.458 42.308 2.24 1.47 0.00 3.27
5123 8255 6.314400 TCGGCCATGTAGTTATTAACAGAAAC 59.686 38.462 2.24 2.84 0.00 2.78
5124 8256 6.408035 TCGGCCATGTAGTTATTAACAGAAA 58.592 36.000 2.24 0.00 0.00 2.52
5125 8257 5.979993 TCGGCCATGTAGTTATTAACAGAA 58.020 37.500 2.24 0.00 0.00 3.02
5126 8258 5.601583 TCGGCCATGTAGTTATTAACAGA 57.398 39.130 2.24 0.00 0.00 3.41
5127 8259 6.861065 ATTCGGCCATGTAGTTATTAACAG 57.139 37.500 2.24 0.00 0.00 3.16
5128 8260 6.425721 GCTATTCGGCCATGTAGTTATTAACA 59.574 38.462 2.24 0.00 0.00 2.41
5129 8261 6.425721 TGCTATTCGGCCATGTAGTTATTAAC 59.574 38.462 2.24 0.00 0.00 2.01
5130 8262 6.425721 GTGCTATTCGGCCATGTAGTTATTAA 59.574 38.462 2.24 0.00 0.00 1.40
5131 8263 5.929992 GTGCTATTCGGCCATGTAGTTATTA 59.070 40.000 2.24 0.00 0.00 0.98
5132 8264 4.755123 GTGCTATTCGGCCATGTAGTTATT 59.245 41.667 2.24 0.00 0.00 1.40
5133 8265 4.315803 GTGCTATTCGGCCATGTAGTTAT 58.684 43.478 2.24 0.00 0.00 1.89
5134 8266 3.724374 GTGCTATTCGGCCATGTAGTTA 58.276 45.455 2.24 0.00 0.00 2.24
5135 8267 2.561569 GTGCTATTCGGCCATGTAGTT 58.438 47.619 2.24 0.00 0.00 2.24
5136 8268 1.538204 CGTGCTATTCGGCCATGTAGT 60.538 52.381 2.24 0.00 0.00 2.73
5137 8269 1.139989 CGTGCTATTCGGCCATGTAG 58.860 55.000 2.24 2.01 0.00 2.74
5138 8270 0.462375 ACGTGCTATTCGGCCATGTA 59.538 50.000 2.24 0.00 0.00 2.29
5139 8271 1.089481 CACGTGCTATTCGGCCATGT 61.089 55.000 0.82 0.00 0.00 3.21
5140 8272 1.643292 CACGTGCTATTCGGCCATG 59.357 57.895 0.82 0.00 0.00 3.66
5141 8273 2.180204 GCACGTGCTATTCGGCCAT 61.180 57.895 32.55 0.00 38.21 4.40
5142 8274 2.817834 GCACGTGCTATTCGGCCA 60.818 61.111 32.55 0.00 38.21 5.36
5152 8284 3.424433 GGTGTTGATAAGTTAGCACGTGC 60.424 47.826 32.79 32.79 42.49 5.34
5153 8285 3.994392 AGGTGTTGATAAGTTAGCACGTG 59.006 43.478 12.28 12.28 0.00 4.49
5154 8286 4.267349 AGGTGTTGATAAGTTAGCACGT 57.733 40.909 0.00 0.72 0.00 4.49
5155 8287 6.715344 TTTAGGTGTTGATAAGTTAGCACG 57.285 37.500 0.00 0.00 0.00 5.34
5156 8288 7.537649 GCTTTTTAGGTGTTGATAAGTTAGCAC 59.462 37.037 0.00 1.46 0.00 4.40
5157 8289 7.229707 TGCTTTTTAGGTGTTGATAAGTTAGCA 59.770 33.333 0.00 0.00 0.00 3.49
5158 8290 7.590279 TGCTTTTTAGGTGTTGATAAGTTAGC 58.410 34.615 0.00 0.00 0.00 3.09
5159 8291 9.394477 GTTGCTTTTTAGGTGTTGATAAGTTAG 57.606 33.333 0.00 0.00 0.00 2.34
5160 8292 8.904834 TGTTGCTTTTTAGGTGTTGATAAGTTA 58.095 29.630 0.00 0.00 0.00 2.24
5161 8293 7.777095 TGTTGCTTTTTAGGTGTTGATAAGTT 58.223 30.769 0.00 0.00 0.00 2.66
5162 8294 7.341445 TGTTGCTTTTTAGGTGTTGATAAGT 57.659 32.000 0.00 0.00 0.00 2.24
5163 8295 8.081633 TGATGTTGCTTTTTAGGTGTTGATAAG 58.918 33.333 0.00 0.00 0.00 1.73
5164 8296 7.865385 GTGATGTTGCTTTTTAGGTGTTGATAA 59.135 33.333 0.00 0.00 0.00 1.75
5165 8297 7.367285 GTGATGTTGCTTTTTAGGTGTTGATA 58.633 34.615 0.00 0.00 0.00 2.15
5166 8298 6.215845 GTGATGTTGCTTTTTAGGTGTTGAT 58.784 36.000 0.00 0.00 0.00 2.57
5167 8299 5.451242 GGTGATGTTGCTTTTTAGGTGTTGA 60.451 40.000 0.00 0.00 0.00 3.18
5168 8300 4.744631 GGTGATGTTGCTTTTTAGGTGTTG 59.255 41.667 0.00 0.00 0.00 3.33
5169 8301 4.499019 CGGTGATGTTGCTTTTTAGGTGTT 60.499 41.667 0.00 0.00 0.00 3.32
5170 8302 3.004315 CGGTGATGTTGCTTTTTAGGTGT 59.996 43.478 0.00 0.00 0.00 4.16
5171 8303 3.564511 CGGTGATGTTGCTTTTTAGGTG 58.435 45.455 0.00 0.00 0.00 4.00
5172 8304 2.556622 CCGGTGATGTTGCTTTTTAGGT 59.443 45.455 0.00 0.00 0.00 3.08
5173 8305 2.817258 TCCGGTGATGTTGCTTTTTAGG 59.183 45.455 0.00 0.00 0.00 2.69
5174 8306 4.701956 ATCCGGTGATGTTGCTTTTTAG 57.298 40.909 0.00 0.00 0.00 1.85
5175 8307 6.576662 TTAATCCGGTGATGTTGCTTTTTA 57.423 33.333 0.00 0.00 0.00 1.52
5176 8308 5.461032 TTAATCCGGTGATGTTGCTTTTT 57.539 34.783 0.00 0.00 0.00 1.94
5177 8309 5.184864 TGATTAATCCGGTGATGTTGCTTTT 59.815 36.000 12.90 0.00 0.00 2.27
5178 8310 4.704540 TGATTAATCCGGTGATGTTGCTTT 59.295 37.500 12.90 0.00 0.00 3.51
5179 8311 4.269183 TGATTAATCCGGTGATGTTGCTT 58.731 39.130 12.90 0.00 0.00 3.91
5180 8312 3.879295 CTGATTAATCCGGTGATGTTGCT 59.121 43.478 12.90 0.00 0.00 3.91
5181 8313 3.548818 GCTGATTAATCCGGTGATGTTGC 60.549 47.826 12.90 0.00 0.00 4.17
5182 8314 3.303329 CGCTGATTAATCCGGTGATGTTG 60.303 47.826 12.90 0.00 0.00 3.33
5183 8315 2.872245 CGCTGATTAATCCGGTGATGTT 59.128 45.455 12.90 0.00 0.00 2.71
5184 8316 2.158957 ACGCTGATTAATCCGGTGATGT 60.159 45.455 19.17 5.77 0.00 3.06
5185 8317 2.221749 CACGCTGATTAATCCGGTGATG 59.778 50.000 18.46 12.13 0.00 3.07
5186 8318 2.158957 ACACGCTGATTAATCCGGTGAT 60.159 45.455 25.09 13.70 0.00 3.06
5187 8319 1.206132 ACACGCTGATTAATCCGGTGA 59.794 47.619 25.09 5.33 0.00 4.02
5188 8320 1.327460 CACACGCTGATTAATCCGGTG 59.673 52.381 20.26 20.26 0.00 4.94
5189 8321 1.651987 CACACGCTGATTAATCCGGT 58.348 50.000 12.90 5.32 0.00 5.28
5190 8322 0.304705 GCACACGCTGATTAATCCGG 59.695 55.000 12.90 0.00 34.30 5.14
5191 8323 3.806257 GCACACGCTGATTAATCCG 57.194 52.632 12.90 11.93 34.30 4.18
5202 8334 1.278238 GGTCATACACTAGCACACGC 58.722 55.000 0.00 0.00 38.99 5.34
5203 8335 1.545759 CGGTCATACACTAGCACACG 58.454 55.000 0.00 0.00 0.00 4.49
5204 8336 1.475280 TCCGGTCATACACTAGCACAC 59.525 52.381 0.00 0.00 0.00 3.82
5205 8337 1.842052 TCCGGTCATACACTAGCACA 58.158 50.000 0.00 0.00 0.00 4.57
5206 8338 3.454371 AATCCGGTCATACACTAGCAC 57.546 47.619 0.00 0.00 0.00 4.40
5207 8339 5.303333 TGATTAATCCGGTCATACACTAGCA 59.697 40.000 12.90 0.00 0.00 3.49
5208 8340 5.634020 GTGATTAATCCGGTCATACACTAGC 59.366 44.000 12.90 0.00 0.00 3.42
5209 8341 6.015350 AGGTGATTAATCCGGTCATACACTAG 60.015 42.308 12.90 0.00 0.00 2.57
5210 8342 5.836898 AGGTGATTAATCCGGTCATACACTA 59.163 40.000 12.90 0.00 0.00 2.74
5211 8343 4.654262 AGGTGATTAATCCGGTCATACACT 59.346 41.667 12.90 0.54 0.00 3.55
5212 8344 4.750098 CAGGTGATTAATCCGGTCATACAC 59.250 45.833 12.90 6.62 0.00 2.90
5213 8345 4.742440 GCAGGTGATTAATCCGGTCATACA 60.742 45.833 12.90 0.00 0.00 2.29
5214 8346 3.746492 GCAGGTGATTAATCCGGTCATAC 59.254 47.826 12.90 2.53 0.00 2.39
5215 8347 3.389656 TGCAGGTGATTAATCCGGTCATA 59.610 43.478 12.90 0.00 0.00 2.15
5216 8348 2.172505 TGCAGGTGATTAATCCGGTCAT 59.827 45.455 12.90 0.00 0.00 3.06
5217 8349 1.557371 TGCAGGTGATTAATCCGGTCA 59.443 47.619 12.90 0.00 0.00 4.02
5218 8350 2.213499 CTGCAGGTGATTAATCCGGTC 58.787 52.381 12.90 0.00 0.00 4.79
5219 8351 1.747206 GCTGCAGGTGATTAATCCGGT 60.747 52.381 17.12 0.00 0.00 5.28
5220 8352 0.947244 GCTGCAGGTGATTAATCCGG 59.053 55.000 17.12 0.00 0.00 5.14
5221 8353 1.959042 AGCTGCAGGTGATTAATCCG 58.041 50.000 19.45 0.64 0.00 4.18
5222 8354 3.808728 TGTAGCTGCAGGTGATTAATCC 58.191 45.455 28.10 0.29 0.00 3.01
5223 8355 4.214971 CCATGTAGCTGCAGGTGATTAATC 59.785 45.833 28.10 8.60 0.00 1.75
5224 8356 4.139786 CCATGTAGCTGCAGGTGATTAAT 58.860 43.478 28.10 11.02 0.00 1.40
5225 8357 3.544684 CCATGTAGCTGCAGGTGATTAA 58.455 45.455 28.10 4.80 0.00 1.40
5226 8358 2.746142 GCCATGTAGCTGCAGGTGATTA 60.746 50.000 28.10 11.59 0.00 1.75
5227 8359 2.020694 GCCATGTAGCTGCAGGTGATT 61.021 52.381 28.10 9.41 0.00 2.57
5228 8360 0.465097 GCCATGTAGCTGCAGGTGAT 60.465 55.000 28.10 16.36 0.00 3.06
5229 8361 1.078214 GCCATGTAGCTGCAGGTGA 60.078 57.895 28.10 14.76 0.00 4.02
5230 8362 2.117156 GGCCATGTAGCTGCAGGTG 61.117 63.158 28.10 12.06 0.00 4.00
5231 8363 1.929860 ATGGCCATGTAGCTGCAGGT 61.930 55.000 23.72 23.72 0.00 4.00
5232 8364 1.152819 ATGGCCATGTAGCTGCAGG 60.153 57.895 20.04 10.35 0.00 4.85
5233 8365 2.030551 CATGGCCATGTAGCTGCAG 58.969 57.895 33.68 10.11 34.23 4.41
5234 8366 2.122797 GCATGGCCATGTAGCTGCA 61.123 57.895 39.08 7.05 40.80 4.41
5235 8367 2.122797 TGCATGGCCATGTAGCTGC 61.123 57.895 39.08 28.91 40.80 5.25
5236 8368 1.731700 GTGCATGGCCATGTAGCTG 59.268 57.895 39.08 20.93 40.80 4.24
5237 8369 1.820906 CGTGCATGGCCATGTAGCT 60.821 57.895 39.08 8.14 40.80 3.32
5238 8370 1.779025 CTCGTGCATGGCCATGTAGC 61.779 60.000 39.08 28.57 40.80 3.58
5239 8371 0.462581 ACTCGTGCATGGCCATGTAG 60.463 55.000 39.08 31.12 40.80 2.74
5240 8372 0.461870 GACTCGTGCATGGCCATGTA 60.462 55.000 39.08 34.91 40.80 2.29
5241 8373 1.746615 GACTCGTGCATGGCCATGT 60.747 57.895 39.08 23.34 40.80 3.21
5242 8374 1.307355 TTGACTCGTGCATGGCCATG 61.307 55.000 36.80 36.80 41.60 3.66
5243 8375 1.002257 TTGACTCGTGCATGGCCAT 60.002 52.632 14.09 14.09 0.00 4.40
5244 8376 1.965930 GTTGACTCGTGCATGGCCA 60.966 57.895 8.56 8.56 0.00 5.36
5245 8377 2.690778 GGTTGACTCGTGCATGGCC 61.691 63.158 5.98 0.00 0.00 5.36
5246 8378 1.639298 GAGGTTGACTCGTGCATGGC 61.639 60.000 5.98 0.00 36.29 4.40
5247 8379 2.460330 GAGGTTGACTCGTGCATGG 58.540 57.895 5.98 0.00 36.29 3.66
5255 8387 1.884579 TCGTACACAGGAGGTTGACTC 59.115 52.381 0.00 0.00 45.84 3.36
5256 8388 1.887198 CTCGTACACAGGAGGTTGACT 59.113 52.381 0.00 0.00 33.83 3.41
5257 8389 1.612463 ACTCGTACACAGGAGGTTGAC 59.388 52.381 0.00 0.00 40.31 3.18
5258 8390 1.611977 CACTCGTACACAGGAGGTTGA 59.388 52.381 0.00 0.00 40.31 3.18
5259 8391 1.340248 ACACTCGTACACAGGAGGTTG 59.660 52.381 0.00 0.00 40.31 3.77
5260 8392 1.340248 CACACTCGTACACAGGAGGTT 59.660 52.381 0.00 0.00 40.31 3.50
5261 8393 0.959553 CACACTCGTACACAGGAGGT 59.040 55.000 0.00 0.00 40.31 3.85
5262 8394 0.388649 GCACACTCGTACACAGGAGG 60.389 60.000 0.00 0.00 40.31 4.30
5263 8395 0.598562 AGCACACTCGTACACAGGAG 59.401 55.000 0.00 0.00 41.49 3.69
5264 8396 0.596577 GAGCACACTCGTACACAGGA 59.403 55.000 0.00 0.00 32.04 3.86
5265 8397 0.388649 GGAGCACACTCGTACACAGG 60.389 60.000 0.00 0.00 44.48 4.00
5266 8398 0.313987 TGGAGCACACTCGTACACAG 59.686 55.000 0.00 0.00 44.48 3.66
5267 8399 0.747852 TTGGAGCACACTCGTACACA 59.252 50.000 0.00 0.00 44.48 3.72
5268 8400 1.726791 CATTGGAGCACACTCGTACAC 59.273 52.381 0.00 0.00 44.48 2.90
5269 8401 1.616374 TCATTGGAGCACACTCGTACA 59.384 47.619 0.00 0.00 44.48 2.90
5270 8402 1.993370 GTCATTGGAGCACACTCGTAC 59.007 52.381 0.00 0.00 44.48 3.67
5271 8403 1.067142 GGTCATTGGAGCACACTCGTA 60.067 52.381 0.00 0.00 44.48 3.43
5272 8404 0.320771 GGTCATTGGAGCACACTCGT 60.321 55.000 0.00 0.00 44.48 4.18
5273 8405 0.320683 TGGTCATTGGAGCACACTCG 60.321 55.000 0.00 0.00 45.96 4.18
5274 8406 3.631453 TGGTCATTGGAGCACACTC 57.369 52.632 0.00 0.00 45.96 3.51
5280 8412 5.532406 TGCTAAATAGATTGGTCATTGGAGC 59.468 40.000 0.00 0.00 41.89 4.70
5281 8413 7.572523 TTGCTAAATAGATTGGTCATTGGAG 57.427 36.000 0.00 0.00 0.00 3.86
5282 8414 6.039717 GCTTGCTAAATAGATTGGTCATTGGA 59.960 38.462 0.00 0.00 0.00 3.53
5283 8415 6.040166 AGCTTGCTAAATAGATTGGTCATTGG 59.960 38.462 0.00 0.00 0.00 3.16
5284 8416 7.035840 AGCTTGCTAAATAGATTGGTCATTG 57.964 36.000 0.00 0.00 0.00 2.82
5285 8417 7.040823 GCTAGCTTGCTAAATAGATTGGTCATT 60.041 37.037 13.17 0.00 0.00 2.57
5286 8418 6.429385 GCTAGCTTGCTAAATAGATTGGTCAT 59.571 38.462 13.17 0.00 0.00 3.06
5287 8419 5.760253 GCTAGCTTGCTAAATAGATTGGTCA 59.240 40.000 13.17 0.00 0.00 4.02
5288 8420 5.994668 AGCTAGCTTGCTAAATAGATTGGTC 59.005 40.000 21.42 0.00 42.10 4.02
5289 8421 5.934781 AGCTAGCTTGCTAAATAGATTGGT 58.065 37.500 21.42 0.00 42.10 3.67
5290 8422 6.874288 AAGCTAGCTTGCTAAATAGATTGG 57.126 37.500 28.83 0.00 43.24 3.16
5291 8423 7.701445 ACAAAGCTAGCTTGCTAAATAGATTG 58.299 34.615 29.94 21.04 43.24 2.67
5292 8424 7.872113 ACAAAGCTAGCTTGCTAAATAGATT 57.128 32.000 29.94 8.96 43.24 2.40
5293 8425 7.254590 CGAACAAAGCTAGCTTGCTAAATAGAT 60.255 37.037 29.94 7.93 43.24 1.98
5294 8426 6.036083 CGAACAAAGCTAGCTTGCTAAATAGA 59.964 38.462 29.94 0.00 43.24 1.98
5295 8427 6.036083 TCGAACAAAGCTAGCTTGCTAAATAG 59.964 38.462 29.94 15.95 43.24 1.73
5296 8428 5.872617 TCGAACAAAGCTAGCTTGCTAAATA 59.127 36.000 29.94 10.99 43.24 1.40
5297 8429 4.695455 TCGAACAAAGCTAGCTTGCTAAAT 59.305 37.500 29.94 11.00 43.24 1.40
5298 8430 4.062293 TCGAACAAAGCTAGCTTGCTAAA 58.938 39.130 29.94 11.93 43.24 1.85
5299 8431 3.659786 TCGAACAAAGCTAGCTTGCTAA 58.340 40.909 29.94 11.41 43.24 3.09
5300 8432 3.056821 TCTCGAACAAAGCTAGCTTGCTA 60.057 43.478 29.94 11.85 43.24 3.49
5301 8433 2.072298 CTCGAACAAAGCTAGCTTGCT 58.928 47.619 29.94 17.30 46.40 3.91
5302 8434 2.069273 TCTCGAACAAAGCTAGCTTGC 58.931 47.619 29.94 17.72 36.26 4.01
5303 8435 3.681897 ACATCTCGAACAAAGCTAGCTTG 59.318 43.478 29.94 23.56 36.26 4.01
5304 8436 3.681897 CACATCTCGAACAAAGCTAGCTT 59.318 43.478 24.42 24.42 37.98 3.74
5305 8437 3.257393 CACATCTCGAACAAAGCTAGCT 58.743 45.455 12.68 12.68 0.00 3.32
5306 8438 2.222908 GCACATCTCGAACAAAGCTAGC 60.223 50.000 6.62 6.62 0.00 3.42
5307 8439 2.995939 TGCACATCTCGAACAAAGCTAG 59.004 45.455 0.00 0.00 0.00 3.42
5308 8440 2.995939 CTGCACATCTCGAACAAAGCTA 59.004 45.455 0.00 0.00 0.00 3.32
5309 8441 1.802960 CTGCACATCTCGAACAAAGCT 59.197 47.619 0.00 0.00 0.00 3.74
5310 8442 1.800586 TCTGCACATCTCGAACAAAGC 59.199 47.619 0.00 0.00 0.00 3.51
5311 8443 4.024556 AGTTTCTGCACATCTCGAACAAAG 60.025 41.667 0.00 0.00 0.00 2.77
5312 8444 3.876914 AGTTTCTGCACATCTCGAACAAA 59.123 39.130 0.00 0.00 0.00 2.83
5313 8445 3.466836 AGTTTCTGCACATCTCGAACAA 58.533 40.909 0.00 0.00 0.00 2.83
5314 8446 3.111853 AGTTTCTGCACATCTCGAACA 57.888 42.857 0.00 0.00 0.00 3.18
5315 8447 5.499334 CGAATAGTTTCTGCACATCTCGAAC 60.499 44.000 0.00 0.00 0.00 3.95
5316 8448 4.562789 CGAATAGTTTCTGCACATCTCGAA 59.437 41.667 0.00 0.00 0.00 3.71
5317 8449 4.105486 CGAATAGTTTCTGCACATCTCGA 58.895 43.478 0.00 0.00 0.00 4.04
5318 8450 3.243877 CCGAATAGTTTCTGCACATCTCG 59.756 47.826 0.00 0.00 0.00 4.04
5319 8451 3.001736 GCCGAATAGTTTCTGCACATCTC 59.998 47.826 0.00 0.00 40.58 2.75
5320 8452 2.939103 GCCGAATAGTTTCTGCACATCT 59.061 45.455 0.00 0.00 40.58 2.90
5321 8453 2.677836 TGCCGAATAGTTTCTGCACATC 59.322 45.455 1.42 0.00 44.11 3.06
5322 8454 2.710377 TGCCGAATAGTTTCTGCACAT 58.290 42.857 1.42 0.00 44.11 3.21
5323 8455 2.177394 TGCCGAATAGTTTCTGCACA 57.823 45.000 1.42 0.00 44.11 4.57
5325 8457 1.810151 GGTTGCCGAATAGTTTCTGCA 59.190 47.619 1.42 1.42 46.28 4.41
5326 8458 1.810151 TGGTTGCCGAATAGTTTCTGC 59.190 47.619 0.00 0.00 41.07 4.26
5327 8459 3.074412 ACTGGTTGCCGAATAGTTTCTG 58.926 45.455 0.00 0.00 0.00 3.02
5328 8460 3.074412 CACTGGTTGCCGAATAGTTTCT 58.926 45.455 0.00 0.00 0.00 2.52
5329 8461 3.071479 TCACTGGTTGCCGAATAGTTTC 58.929 45.455 0.00 0.00 0.00 2.78
5330 8462 3.134574 TCACTGGTTGCCGAATAGTTT 57.865 42.857 0.00 0.00 0.00 2.66
5331 8463 2.851263 TCACTGGTTGCCGAATAGTT 57.149 45.000 0.00 0.00 0.00 2.24
5332 8464 2.851263 TTCACTGGTTGCCGAATAGT 57.149 45.000 0.00 0.00 0.00 2.12
5333 8465 3.689161 TGAATTCACTGGTTGCCGAATAG 59.311 43.478 3.38 0.00 0.00 1.73
5334 8466 3.680490 TGAATTCACTGGTTGCCGAATA 58.320 40.909 3.38 0.00 0.00 1.75
5335 8467 2.513753 TGAATTCACTGGTTGCCGAAT 58.486 42.857 3.38 0.00 0.00 3.34
5336 8468 1.974265 TGAATTCACTGGTTGCCGAA 58.026 45.000 3.38 0.00 0.00 4.30
5337 8469 2.198827 ATGAATTCACTGGTTGCCGA 57.801 45.000 11.07 0.00 0.00 5.54
5338 8470 4.637483 ATAATGAATTCACTGGTTGCCG 57.363 40.909 11.07 0.00 0.00 5.69
5339 8471 8.947055 ATTTTATAATGAATTCACTGGTTGCC 57.053 30.769 11.07 0.00 0.00 4.52
5360 8492 9.698309 CCGACTCATCTATCTGTTGTATATTTT 57.302 33.333 0.00 0.00 0.00 1.82
5361 8493 7.815068 GCCGACTCATCTATCTGTTGTATATTT 59.185 37.037 0.00 0.00 0.00 1.40
5362 8494 7.316640 GCCGACTCATCTATCTGTTGTATATT 58.683 38.462 0.00 0.00 0.00 1.28
5363 8495 6.403746 CGCCGACTCATCTATCTGTTGTATAT 60.404 42.308 0.00 0.00 0.00 0.86
5364 8496 5.106673 CGCCGACTCATCTATCTGTTGTATA 60.107 44.000 0.00 0.00 0.00 1.47
5365 8497 4.320567 CGCCGACTCATCTATCTGTTGTAT 60.321 45.833 0.00 0.00 0.00 2.29
5366 8498 3.003378 CGCCGACTCATCTATCTGTTGTA 59.997 47.826 0.00 0.00 0.00 2.41
5367 8499 2.223595 CGCCGACTCATCTATCTGTTGT 60.224 50.000 0.00 0.00 0.00 3.32
5368 8500 2.389059 CGCCGACTCATCTATCTGTTG 58.611 52.381 0.00 0.00 0.00 3.33
5369 8501 1.338337 CCGCCGACTCATCTATCTGTT 59.662 52.381 0.00 0.00 0.00 3.16
5370 8502 0.955178 CCGCCGACTCATCTATCTGT 59.045 55.000 0.00 0.00 0.00 3.41
5371 8503 0.387878 GCCGCCGACTCATCTATCTG 60.388 60.000 0.00 0.00 0.00 2.90
5372 8504 1.528292 GGCCGCCGACTCATCTATCT 61.528 60.000 0.00 0.00 0.00 1.98
5373 8505 1.080434 GGCCGCCGACTCATCTATC 60.080 63.158 0.00 0.00 0.00 2.08
5374 8506 3.052081 GGCCGCCGACTCATCTAT 58.948 61.111 0.00 0.00 0.00 1.98
5389 8521 3.718480 GAAAATCAGTCGCCGCGGC 62.718 63.158 39.82 39.82 37.85 6.53
5390 8522 0.804544 TAGAAAATCAGTCGCCGCGG 60.805 55.000 24.05 24.05 0.00 6.46
5391 8523 0.996462 TTAGAAAATCAGTCGCCGCG 59.004 50.000 6.39 6.39 0.00 6.46
5392 8524 2.607635 TGATTAGAAAATCAGTCGCCGC 59.392 45.455 0.00 0.00 45.17 6.53
5401 8533 6.564873 GCCATCTACGCACTGATTAGAAAATC 60.565 42.308 0.00 0.00 41.69 2.17
5402 8534 5.237344 GCCATCTACGCACTGATTAGAAAAT 59.763 40.000 0.00 0.00 0.00 1.82
5403 8535 4.570772 GCCATCTACGCACTGATTAGAAAA 59.429 41.667 0.00 0.00 0.00 2.29
5404 8536 4.119862 GCCATCTACGCACTGATTAGAAA 58.880 43.478 0.00 0.00 0.00 2.52
5405 8537 3.717707 GCCATCTACGCACTGATTAGAA 58.282 45.455 0.00 0.00 0.00 2.10
5406 8538 2.287608 CGCCATCTACGCACTGATTAGA 60.288 50.000 0.00 0.00 0.00 2.10
5407 8539 2.054363 CGCCATCTACGCACTGATTAG 58.946 52.381 0.00 0.00 0.00 1.73
5408 8540 1.269569 CCGCCATCTACGCACTGATTA 60.270 52.381 0.00 0.00 0.00 1.75
5409 8541 0.530650 CCGCCATCTACGCACTGATT 60.531 55.000 0.00 0.00 0.00 2.57
5410 8542 1.068083 CCGCCATCTACGCACTGAT 59.932 57.895 0.00 0.00 0.00 2.90
5411 8543 2.348104 ACCGCCATCTACGCACTGA 61.348 57.895 0.00 0.00 0.00 3.41
5412 8544 2.167219 CACCGCCATCTACGCACTG 61.167 63.158 0.00 0.00 0.00 3.66
5413 8545 2.184322 CACCGCCATCTACGCACT 59.816 61.111 0.00 0.00 0.00 4.40
5414 8546 2.125673 ACACCGCCATCTACGCAC 60.126 61.111 0.00 0.00 0.00 5.34
5415 8547 2.161078 TTGACACCGCCATCTACGCA 62.161 55.000 0.00 0.00 0.00 5.24
5416 8548 1.447140 TTGACACCGCCATCTACGC 60.447 57.895 0.00 0.00 0.00 4.42
5417 8549 0.389296 TGTTGACACCGCCATCTACG 60.389 55.000 0.00 0.00 0.00 3.51
5418 8550 1.359848 CTGTTGACACCGCCATCTAC 58.640 55.000 0.00 0.00 0.00 2.59
5419 8551 0.249120 CCTGTTGACACCGCCATCTA 59.751 55.000 0.00 0.00 0.00 1.98
5420 8552 1.003355 CCTGTTGACACCGCCATCT 60.003 57.895 0.00 0.00 0.00 2.90
5421 8553 2.690778 GCCTGTTGACACCGCCATC 61.691 63.158 0.00 0.00 0.00 3.51
5422 8554 2.672996 GCCTGTTGACACCGCCAT 60.673 61.111 0.00 0.00 0.00 4.40
5423 8555 2.046009 TAAGCCTGTTGACACCGCCA 62.046 55.000 0.00 0.00 0.00 5.69
5424 8556 1.298859 CTAAGCCTGTTGACACCGCC 61.299 60.000 0.00 0.00 0.00 6.13
5425 8557 1.912371 GCTAAGCCTGTTGACACCGC 61.912 60.000 0.00 0.00 0.00 5.68
5426 8558 0.602638 TGCTAAGCCTGTTGACACCG 60.603 55.000 0.00 0.00 0.00 4.94
5427 8559 0.875059 GTGCTAAGCCTGTTGACACC 59.125 55.000 0.00 0.00 0.00 4.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.