Multiple sequence alignment - TraesCS4D01G212400

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G212400 chr4D 100.000 2477 0 0 1 2477 365400483 365398007 0.000000e+00 4575.0
1 TraesCS4D01G212400 chr4D 84.314 918 84 24 838 1717 365187754 365188649 0.000000e+00 843.0
2 TraesCS4D01G212400 chr4D 88.470 477 52 2 1001 1477 365864993 365864520 7.680000e-160 573.0
3 TraesCS4D01G212400 chr4D 88.174 482 54 2 998 1479 365217550 365218028 2.760000e-159 571.0
4 TraesCS4D01G212400 chr4D 88.100 479 54 2 1001 1479 366219636 366219161 1.290000e-157 566.0
5 TraesCS4D01G212400 chr4D 90.244 123 9 2 2023 2142 365188819 365188941 9.170000e-35 158.0
6 TraesCS4D01G212400 chr4D 100.000 50 0 0 1745 1794 509340328 509340377 2.620000e-15 93.5
7 TraesCS4D01G212400 chr4D 92.188 64 3 2 1743 1805 147273951 147273889 3.390000e-14 89.8
8 TraesCS4D01G212400 chr4A 96.907 582 17 1 986 1567 100187749 100188329 0.000000e+00 974.0
9 TraesCS4D01G212400 chr4A 87.297 740 55 20 841 1545 100551545 100550810 0.000000e+00 809.0
10 TraesCS4D01G212400 chr4A 87.835 485 57 2 996 1479 98785511 98785994 3.580000e-158 568.0
11 TraesCS4D01G212400 chr4A 87.654 486 57 2 992 1477 99005038 99005520 1.660000e-156 562.0
12 TraesCS4D01G212400 chr4A 92.720 261 18 1 2001 2261 100188802 100189061 2.330000e-100 375.0
13 TraesCS4D01G212400 chr4A 88.163 245 23 3 2023 2266 100550499 100550260 1.120000e-73 287.0
14 TraesCS4D01G212400 chr4A 96.341 82 3 0 1635 1716 100188632 100188713 4.300000e-28 135.0
15 TraesCS4D01G212400 chr4A 83.193 119 10 4 1609 1717 100550789 100550671 1.570000e-17 100.0
16 TraesCS4D01G212400 chr4A 94.915 59 2 1 1792 1850 100188715 100188772 9.430000e-15 91.6
17 TraesCS4D01G212400 chr4A 91.935 62 3 2 1743 1803 467233779 467233719 4.390000e-13 86.1
18 TraesCS4D01G212400 chr6B 94.554 606 28 4 1 604 54896164 54896766 0.000000e+00 931.0
19 TraesCS4D01G212400 chr6B 90.722 194 17 1 648 840 54896765 54896958 8.790000e-65 257.0
20 TraesCS4D01G212400 chr7A 93.412 592 33 5 1 589 271725153 271724565 0.000000e+00 872.0
21 TraesCS4D01G212400 chr7A 85.279 197 12 7 648 843 271724553 271724373 1.170000e-43 187.0
22 TraesCS4D01G212400 chr5D 91.993 612 39 5 1 604 494610115 494609506 0.000000e+00 850.0
23 TraesCS4D01G212400 chr5D 93.717 191 12 0 650 840 494609504 494609314 1.120000e-73 287.0
24 TraesCS4D01G212400 chr1D 89.159 618 31 13 1 607 463053683 463053091 0.000000e+00 737.0
25 TraesCS4D01G212400 chr1B 89.055 603 29 9 1 589 350439786 350440365 0.000000e+00 713.0
26 TraesCS4D01G212400 chr1B 92.386 197 14 1 648 843 350440377 350440573 1.880000e-71 279.0
27 TraesCS4D01G212400 chr1B 98.077 52 1 0 1745 1796 624639921 624639972 9.430000e-15 91.6
28 TraesCS4D01G212400 chr1B 91.935 62 2 3 1734 1793 673452077 673452137 1.580000e-12 84.2
29 TraesCS4D01G212400 chr4B 87.212 477 58 2 1001 1477 450483239 450482766 7.790000e-150 540.0
30 TraesCS4D01G212400 chr4B 89.160 369 29 10 240 604 603180347 603180708 1.350000e-122 449.0
31 TraesCS4D01G212400 chr4B 96.154 78 3 0 1717 1794 453247663 453247586 7.190000e-26 128.0
32 TraesCS4D01G212400 chr4B 93.443 61 3 1 240 299 450089985 450089925 3.390000e-14 89.8
33 TraesCS4D01G212400 chr7D 91.808 354 19 7 240 590 46525943 46526289 3.700000e-133 484.0
34 TraesCS4D01G212400 chr7D 90.909 121 11 0 1884 2004 42694734 42694854 1.970000e-36 163.0
35 TraesCS4D01G212400 chr7D 91.379 116 10 0 1895 2010 19020443 19020328 2.550000e-35 159.0
36 TraesCS4D01G212400 chr3D 92.879 323 21 2 1 323 589507743 589508063 3.730000e-128 468.0
37 TraesCS4D01G212400 chr3D 92.256 297 20 3 308 604 589508003 589508296 3.810000e-113 418.0
38 TraesCS4D01G212400 chr3D 93.197 147 10 0 673 819 589518499 589518645 1.490000e-52 217.0
39 TraesCS4D01G212400 chr6D 95.142 247 11 1 1 246 472612683 472612437 2.990000e-104 388.0
40 TraesCS4D01G212400 chr6D 94.359 195 10 1 648 841 472582223 472582029 5.180000e-77 298.0
41 TraesCS4D01G212400 chr6D 94.545 110 6 0 1894 2003 467047360 467047469 1.180000e-38 171.0
42 TraesCS4D01G212400 chr6D 96.491 57 1 1 1743 1798 419759845 419759789 2.620000e-15 93.5
43 TraesCS4D01G212400 chrUn 94.758 248 12 1 1 247 211684105 211684352 3.860000e-103 385.0
44 TraesCS4D01G212400 chrUn 94.758 248 12 1 1 247 287556965 287556718 3.860000e-103 385.0
45 TraesCS4D01G212400 chrUn 94.758 248 12 1 1 247 287558560 287558313 3.860000e-103 385.0
46 TraesCS4D01G212400 chr6A 89.259 270 18 4 322 591 591895884 591895626 6.610000e-86 327.0
47 TraesCS4D01G212400 chr2B 90.968 155 9 2 2321 2470 52346082 52346236 1.160000e-48 204.0
48 TraesCS4D01G212400 chr2B 94.495 109 6 0 1895 2003 779369640 779369532 4.240000e-38 169.0
49 TraesCS4D01G212400 chr7B 94.444 108 6 0 1896 2003 670991888 670991781 1.520000e-37 167.0
50 TraesCS4D01G212400 chr7B 94.444 108 6 0 1896 2003 671056814 671056707 1.520000e-37 167.0
51 TraesCS4D01G212400 chr7B 94.828 58 2 1 1740 1796 113133262 113133319 3.390000e-14 89.8
52 TraesCS4D01G212400 chr3B 93.694 111 6 1 1894 2003 578976374 578976264 5.480000e-37 165.0
53 TraesCS4D01G212400 chr5B 90.678 118 11 0 1886 2003 666202110 666201993 9.170000e-35 158.0
54 TraesCS4D01G212400 chr3A 90.756 119 9 2 1895 2013 707105300 707105416 9.170000e-35 158.0
55 TraesCS4D01G212400 chr2D 94.828 58 2 1 1740 1796 93280516 93280573 3.390000e-14 89.8
56 TraesCS4D01G212400 chr1A 100.000 35 0 0 805 839 588380730 588380764 5.720000e-07 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G212400 chr4D 365398007 365400483 2476 True 4575.000000 4575 100.000000 1 2477 1 chr4D.!!$R2 2476
1 TraesCS4D01G212400 chr4D 365187754 365188941 1187 False 500.500000 843 87.279000 838 2142 2 chr4D.!!$F3 1304
2 TraesCS4D01G212400 chr4A 100550260 100551545 1285 True 398.666667 809 86.217667 841 2266 3 chr4A.!!$R2 1425
3 TraesCS4D01G212400 chr4A 100187749 100189061 1312 False 393.900000 974 95.220750 986 2261 4 chr4A.!!$F3 1275
4 TraesCS4D01G212400 chr6B 54896164 54896958 794 False 594.000000 931 92.638000 1 840 2 chr6B.!!$F1 839
5 TraesCS4D01G212400 chr7A 271724373 271725153 780 True 529.500000 872 89.345500 1 843 2 chr7A.!!$R1 842
6 TraesCS4D01G212400 chr5D 494609314 494610115 801 True 568.500000 850 92.855000 1 840 2 chr5D.!!$R1 839
7 TraesCS4D01G212400 chr1D 463053091 463053683 592 True 737.000000 737 89.159000 1 607 1 chr1D.!!$R1 606
8 TraesCS4D01G212400 chr1B 350439786 350440573 787 False 496.000000 713 90.720500 1 843 2 chr1B.!!$F3 842
9 TraesCS4D01G212400 chr3D 589507743 589508296 553 False 443.000000 468 92.567500 1 604 2 chr3D.!!$F2 603
10 TraesCS4D01G212400 chrUn 287556718 287558560 1842 True 385.000000 385 94.758000 1 247 2 chrUn.!!$R1 246

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
917 2244 0.239879 AACCGGTGCGCTACAAAATG 59.76 50.0 8.52 0.0 0.0 2.32 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1995 3639 0.033699 GGACTACCACGGTACTCCCT 60.034 60.0 9.62 0.0 31.61 4.2 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
201 203 8.560576 ACTTATTTCAGTCATTTCAAAACACG 57.439 30.769 0.00 0.00 0.00 4.49
293 1019 8.940768 TTCAAAAACTTATTTCACTCCTTTGG 57.059 30.769 0.00 0.00 0.00 3.28
457 1638 9.922305 GATTTAAAGATCTTGTCGACCTAAATG 57.078 33.333 14.12 0.00 0.00 2.32
533 1843 9.485591 GCAATTCAAAATGCTAGATTGAAAATG 57.514 29.630 13.66 14.83 43.79 2.32
589 1916 0.393402 AGGACGACATGTGCATGCAT 60.393 50.000 25.64 7.59 42.22 3.96
593 1920 2.609002 GACGACATGTGCATGCATCTAA 59.391 45.455 25.64 10.64 42.39 2.10
596 1923 3.249080 CGACATGTGCATGCATCTAATGA 59.751 43.478 25.64 2.53 42.39 2.57
611 1938 6.393990 CATCTAATGATGTACTACTCCCTGC 58.606 44.000 0.00 0.00 43.68 4.85
612 1939 3.735237 AATGATGTACTACTCCCTGCG 57.265 47.619 0.00 0.00 0.00 5.18
613 1940 2.139323 TGATGTACTACTCCCTGCGT 57.861 50.000 0.00 0.00 0.00 5.24
614 1941 2.453521 TGATGTACTACTCCCTGCGTT 58.546 47.619 0.00 0.00 0.00 4.84
615 1942 2.426024 TGATGTACTACTCCCTGCGTTC 59.574 50.000 0.00 0.00 0.00 3.95
616 1943 1.180029 TGTACTACTCCCTGCGTTCC 58.820 55.000 0.00 0.00 0.00 3.62
617 1944 1.180029 GTACTACTCCCTGCGTTCCA 58.820 55.000 0.00 0.00 0.00 3.53
618 1945 1.547372 GTACTACTCCCTGCGTTCCAA 59.453 52.381 0.00 0.00 0.00 3.53
619 1946 1.053424 ACTACTCCCTGCGTTCCAAA 58.947 50.000 0.00 0.00 0.00 3.28
620 1947 1.418637 ACTACTCCCTGCGTTCCAAAA 59.581 47.619 0.00 0.00 0.00 2.44
621 1948 2.039879 ACTACTCCCTGCGTTCCAAAAT 59.960 45.455 0.00 0.00 0.00 1.82
622 1949 2.871096 ACTCCCTGCGTTCCAAAATA 57.129 45.000 0.00 0.00 0.00 1.40
623 1950 2.711542 ACTCCCTGCGTTCCAAAATAG 58.288 47.619 0.00 0.00 0.00 1.73
624 1951 2.304761 ACTCCCTGCGTTCCAAAATAGA 59.695 45.455 0.00 0.00 0.00 1.98
625 1952 2.678336 CTCCCTGCGTTCCAAAATAGAC 59.322 50.000 0.00 0.00 0.00 2.59
626 1953 2.039216 TCCCTGCGTTCCAAAATAGACA 59.961 45.455 0.00 0.00 0.00 3.41
627 1954 2.161609 CCCTGCGTTCCAAAATAGACAC 59.838 50.000 0.00 0.00 0.00 3.67
628 1955 2.159707 CCTGCGTTCCAAAATAGACACG 60.160 50.000 0.00 0.00 0.00 4.49
629 1956 1.801771 TGCGTTCCAAAATAGACACGG 59.198 47.619 0.00 0.00 0.00 4.94
630 1957 2.070783 GCGTTCCAAAATAGACACGGA 58.929 47.619 0.00 0.00 0.00 4.69
631 1958 2.159747 GCGTTCCAAAATAGACACGGAC 60.160 50.000 0.00 0.00 0.00 4.79
632 1959 3.061322 CGTTCCAAAATAGACACGGACA 58.939 45.455 0.00 0.00 0.00 4.02
633 1960 3.682858 CGTTCCAAAATAGACACGGACAT 59.317 43.478 0.00 0.00 0.00 3.06
634 1961 4.435518 CGTTCCAAAATAGACACGGACATG 60.436 45.833 0.00 0.00 0.00 3.21
635 1962 3.605634 TCCAAAATAGACACGGACATGG 58.394 45.455 0.00 0.00 0.00 3.66
636 1963 3.262151 TCCAAAATAGACACGGACATGGA 59.738 43.478 0.00 0.00 32.33 3.41
637 1964 4.006989 CCAAAATAGACACGGACATGGAA 58.993 43.478 0.00 0.00 0.00 3.53
638 1965 4.142687 CCAAAATAGACACGGACATGGAAC 60.143 45.833 0.00 0.00 0.00 3.62
639 1966 2.579207 ATAGACACGGACATGGAACG 57.421 50.000 0.00 0.63 0.00 3.95
640 1967 0.528924 TAGACACGGACATGGAACGG 59.471 55.000 0.00 0.00 0.00 4.44
641 1968 1.183030 AGACACGGACATGGAACGGA 61.183 55.000 0.00 0.00 0.00 4.69
642 1969 0.736325 GACACGGACATGGAACGGAG 60.736 60.000 0.00 0.00 0.00 4.63
643 1970 1.447838 CACGGACATGGAACGGAGG 60.448 63.158 0.00 0.00 0.00 4.30
644 1971 2.186903 CGGACATGGAACGGAGGG 59.813 66.667 0.00 0.00 0.00 4.30
645 1972 2.355986 CGGACATGGAACGGAGGGA 61.356 63.158 0.00 0.00 0.00 4.20
646 1973 1.522569 GGACATGGAACGGAGGGAG 59.477 63.158 0.00 0.00 0.00 4.30
647 1974 1.265454 GGACATGGAACGGAGGGAGT 61.265 60.000 0.00 0.00 0.00 3.85
648 1975 1.481871 GACATGGAACGGAGGGAGTA 58.518 55.000 0.00 0.00 0.00 2.59
649 1976 2.040178 GACATGGAACGGAGGGAGTAT 58.960 52.381 0.00 0.00 0.00 2.12
650 1977 2.434702 GACATGGAACGGAGGGAGTATT 59.565 50.000 0.00 0.00 0.00 1.89
668 1995 6.059787 AGTATTTGAGTGAAAGCATCCTCT 57.940 37.500 0.00 0.00 0.00 3.69
676 2003 7.063593 TGAGTGAAAGCATCCTCTACTAGTAT 58.936 38.462 2.33 0.00 0.00 2.12
726 2053 6.816640 GTCAGTTGTATTAGCTGTGTATTCCA 59.183 38.462 0.00 0.00 38.61 3.53
740 2067 6.582636 TGTGTATTCCATCTGTATCTCCAAC 58.417 40.000 0.00 0.00 0.00 3.77
785 2112 6.327279 TCACACGAATCTTAAAGTCTGAGA 57.673 37.500 0.00 0.00 0.00 3.27
855 2182 2.639286 CGGCAGTTTCCAGCACAC 59.361 61.111 0.00 0.00 0.00 3.82
898 2225 2.933287 ACCCATCACCGGCCTTCA 60.933 61.111 0.00 0.00 0.00 3.02
911 2238 2.388232 CCTTCAACCGGTGCGCTAC 61.388 63.158 8.52 5.08 0.00 3.58
917 2244 0.239879 AACCGGTGCGCTACAAAATG 59.760 50.000 8.52 0.00 0.00 2.32
930 2257 3.237268 ACAAAATGTGGCCTAGGACAA 57.763 42.857 22.11 10.59 33.39 3.18
931 2258 3.571590 ACAAAATGTGGCCTAGGACAAA 58.428 40.909 22.11 16.54 33.39 2.83
976 2343 3.194755 TGACAGCTTCCTAATCGCAGTTA 59.805 43.478 0.00 0.00 0.00 2.24
1026 2393 4.740822 ATTCCCCGCGGCAAAGCT 62.741 61.111 22.85 0.00 34.40 3.74
1239 2615 1.276705 GAGGAAGTGAAGGTGGAGGTC 59.723 57.143 0.00 0.00 0.00 3.85
1441 2817 0.322906 GCCCAAGAAGGAGGTCAAGG 60.323 60.000 0.00 0.00 41.22 3.61
1446 2822 1.219393 GAAGGAGGTCAAGGAGCCG 59.781 63.158 0.00 0.00 0.00 5.52
1490 2866 1.147153 GCTAGGCTGCTTCGGGATT 59.853 57.895 0.00 0.00 0.00 3.01
1491 2867 1.162800 GCTAGGCTGCTTCGGGATTG 61.163 60.000 0.00 0.00 0.00 2.67
1498 2879 0.391130 TGCTTCGGGATTGAGGTTCG 60.391 55.000 0.00 0.00 0.00 3.95
1517 2898 1.005340 GATTCGCTGCTCTGAGGTTG 58.995 55.000 6.83 0.00 0.00 3.77
1527 2908 1.216710 CTGAGGTTGGACTCGCTCC 59.783 63.158 0.00 0.00 40.39 4.70
1531 2912 0.321996 AGGTTGGACTCGCTCCTTTC 59.678 55.000 1.21 0.00 40.26 2.62
1539 2920 1.336056 ACTCGCTCCTTTCGTGACTTC 60.336 52.381 0.00 0.00 0.00 3.01
1582 3031 0.538516 TGGATTTGGGTCCGTGTTGG 60.539 55.000 0.00 0.00 41.35 3.77
1655 3272 5.954296 ATAGTCATGTAATGCAAGCATCC 57.046 39.130 8.14 3.14 46.21 3.51
1665 3292 1.090052 GCAAGCATCCAGTCCGTACC 61.090 60.000 0.00 0.00 0.00 3.34
1717 3344 2.946329 GAGCGAGTCATGGTTCTCTCTA 59.054 50.000 8.97 0.00 0.00 2.43
1718 3345 2.685897 AGCGAGTCATGGTTCTCTCTAC 59.314 50.000 0.00 0.00 0.00 2.59
1719 3346 2.685897 GCGAGTCATGGTTCTCTCTACT 59.314 50.000 0.00 0.00 0.00 2.57
1720 3347 3.242936 GCGAGTCATGGTTCTCTCTACTC 60.243 52.174 0.00 0.00 0.00 2.59
1721 3348 3.314080 CGAGTCATGGTTCTCTCTACTCC 59.686 52.174 0.00 0.00 30.52 3.85
1722 3349 3.634910 GAGTCATGGTTCTCTCTACTCCC 59.365 52.174 0.00 0.00 0.00 4.30
1723 3350 3.270960 AGTCATGGTTCTCTCTACTCCCT 59.729 47.826 0.00 0.00 0.00 4.20
1724 3351 3.634910 GTCATGGTTCTCTCTACTCCCTC 59.365 52.174 0.00 0.00 0.00 4.30
1725 3352 2.830651 TGGTTCTCTCTACTCCCTCC 57.169 55.000 0.00 0.00 0.00 4.30
1726 3353 1.064611 TGGTTCTCTCTACTCCCTCCG 60.065 57.143 0.00 0.00 0.00 4.63
1727 3354 1.064537 GGTTCTCTCTACTCCCTCCGT 60.065 57.143 0.00 0.00 0.00 4.69
1728 3355 2.621147 GGTTCTCTCTACTCCCTCCGTT 60.621 54.545 0.00 0.00 0.00 4.44
1729 3356 3.090790 GTTCTCTCTACTCCCTCCGTTT 58.909 50.000 0.00 0.00 0.00 3.60
1730 3357 3.002038 TCTCTCTACTCCCTCCGTTTC 57.998 52.381 0.00 0.00 0.00 2.78
1731 3358 1.671845 CTCTCTACTCCCTCCGTTTCG 59.328 57.143 0.00 0.00 0.00 3.46
1749 3376 7.433873 CGTTTCGGAATTACTTGTAGTCTAG 57.566 40.000 0.00 0.00 0.00 2.43
1750 3377 7.246311 CGTTTCGGAATTACTTGTAGTCTAGA 58.754 38.462 0.00 0.00 0.00 2.43
1751 3378 7.914346 CGTTTCGGAATTACTTGTAGTCTAGAT 59.086 37.037 0.00 0.00 0.00 1.98
1754 3381 8.969260 TCGGAATTACTTGTAGTCTAGATACA 57.031 34.615 0.00 3.52 0.00 2.29
1755 3382 9.570468 TCGGAATTACTTGTAGTCTAGATACAT 57.430 33.333 12.73 5.42 33.36 2.29
1756 3383 9.828852 CGGAATTACTTGTAGTCTAGATACATC 57.171 37.037 12.73 8.26 33.36 3.06
1763 3390 8.643324 ACTTGTAGTCTAGATACATCCATTTCC 58.357 37.037 12.73 0.00 33.36 3.13
1764 3391 7.215719 TGTAGTCTAGATACATCCATTTCCG 57.784 40.000 0.00 0.00 0.00 4.30
1765 3392 6.776116 TGTAGTCTAGATACATCCATTTCCGT 59.224 38.462 0.00 0.00 0.00 4.69
1766 3393 6.090483 AGTCTAGATACATCCATTTCCGTG 57.910 41.667 0.00 0.00 0.00 4.94
1767 3394 5.833667 AGTCTAGATACATCCATTTCCGTGA 59.166 40.000 0.00 0.00 0.00 4.35
1768 3395 5.921408 GTCTAGATACATCCATTTCCGTGAC 59.079 44.000 0.00 0.00 0.00 3.67
1769 3396 4.753516 AGATACATCCATTTCCGTGACA 57.246 40.909 0.00 0.00 0.00 3.58
1770 3397 5.097742 AGATACATCCATTTCCGTGACAA 57.902 39.130 0.00 0.00 0.00 3.18
1771 3398 5.118990 AGATACATCCATTTCCGTGACAAG 58.881 41.667 0.00 0.00 0.00 3.16
1772 3399 3.140325 ACATCCATTTCCGTGACAAGT 57.860 42.857 0.00 0.00 0.00 3.16
1773 3400 4.280436 ACATCCATTTCCGTGACAAGTA 57.720 40.909 0.00 0.00 0.00 2.24
1774 3401 4.647611 ACATCCATTTCCGTGACAAGTAA 58.352 39.130 0.00 0.00 0.00 2.24
1775 3402 5.253330 ACATCCATTTCCGTGACAAGTAAT 58.747 37.500 0.00 0.00 0.00 1.89
1776 3403 5.710099 ACATCCATTTCCGTGACAAGTAATT 59.290 36.000 0.00 0.00 0.00 1.40
1777 3404 5.873179 TCCATTTCCGTGACAAGTAATTC 57.127 39.130 0.00 0.00 0.00 2.17
1778 3405 4.698304 TCCATTTCCGTGACAAGTAATTCC 59.302 41.667 0.00 0.00 0.00 3.01
1779 3406 4.436852 CCATTTCCGTGACAAGTAATTCCG 60.437 45.833 0.00 0.00 0.00 4.30
1780 3407 3.663995 TTCCGTGACAAGTAATTCCGA 57.336 42.857 0.00 0.00 0.00 4.55
1781 3408 3.663995 TCCGTGACAAGTAATTCCGAA 57.336 42.857 0.00 0.00 0.00 4.30
1782 3409 3.319755 TCCGTGACAAGTAATTCCGAAC 58.680 45.455 0.00 0.00 0.00 3.95
1783 3410 2.091588 CCGTGACAAGTAATTCCGAACG 59.908 50.000 0.00 0.00 0.00 3.95
1784 3411 2.091588 CGTGACAAGTAATTCCGAACGG 59.908 50.000 6.94 6.94 0.00 4.44
1785 3412 3.319755 GTGACAAGTAATTCCGAACGGA 58.680 45.455 12.04 12.04 43.52 4.69
1786 3413 3.367025 GTGACAAGTAATTCCGAACGGAG 59.633 47.826 15.34 5.60 46.06 4.63
1787 3414 2.928116 GACAAGTAATTCCGAACGGAGG 59.072 50.000 15.34 4.52 46.06 4.30
1788 3415 2.277084 CAAGTAATTCCGAACGGAGGG 58.723 52.381 15.34 0.00 46.06 4.30
1789 3416 1.856629 AGTAATTCCGAACGGAGGGA 58.143 50.000 15.34 2.49 46.06 4.20
1790 3417 1.755380 AGTAATTCCGAACGGAGGGAG 59.245 52.381 15.34 0.00 46.06 4.30
1828 3455 3.861276 TCGATTCTATGTCCGTGTTGT 57.139 42.857 0.00 0.00 0.00 3.32
1841 3468 1.576246 CGTGTTGTAGTCGTACGCATC 59.424 52.381 11.24 3.64 30.95 3.91
1842 3469 2.726989 CGTGTTGTAGTCGTACGCATCT 60.727 50.000 11.24 11.04 30.95 2.90
1843 3470 2.592897 GTGTTGTAGTCGTACGCATCTG 59.407 50.000 11.24 0.00 30.95 2.90
1844 3471 2.485038 TGTTGTAGTCGTACGCATCTGA 59.515 45.455 11.24 0.00 30.95 3.27
1845 3472 3.128068 TGTTGTAGTCGTACGCATCTGAT 59.872 43.478 11.24 0.00 30.95 2.90
1855 3482 5.470437 TCGTACGCATCTGATCTCTAATTCT 59.530 40.000 11.24 0.00 0.00 2.40
1859 3486 5.068329 ACGCATCTGATCTCTAATTCTGTCA 59.932 40.000 0.00 0.00 0.00 3.58
1900 3544 5.234543 GGAACTCTGTTCTTGTGTTGTACTC 59.765 44.000 9.81 0.00 0.00 2.59
1901 3545 4.694339 ACTCTGTTCTTGTGTTGTACTCC 58.306 43.478 0.00 0.00 0.00 3.85
1902 3546 4.058817 CTCTGTTCTTGTGTTGTACTCCC 58.941 47.826 0.00 0.00 0.00 4.30
1903 3547 3.709653 TCTGTTCTTGTGTTGTACTCCCT 59.290 43.478 0.00 0.00 0.00 4.20
1904 3548 4.163458 TCTGTTCTTGTGTTGTACTCCCTT 59.837 41.667 0.00 0.00 0.00 3.95
1905 3549 4.448210 TGTTCTTGTGTTGTACTCCCTTC 58.552 43.478 0.00 0.00 0.00 3.46
1906 3550 3.380479 TCTTGTGTTGTACTCCCTTCG 57.620 47.619 0.00 0.00 0.00 3.79
1907 3551 2.696707 TCTTGTGTTGTACTCCCTTCGT 59.303 45.455 0.00 0.00 0.00 3.85
1908 3552 3.133362 TCTTGTGTTGTACTCCCTTCGTT 59.867 43.478 0.00 0.00 0.00 3.85
1909 3553 3.102052 TGTGTTGTACTCCCTTCGTTC 57.898 47.619 0.00 0.00 0.00 3.95
1910 3554 2.224113 TGTGTTGTACTCCCTTCGTTCC 60.224 50.000 0.00 0.00 0.00 3.62
1911 3555 1.000060 TGTTGTACTCCCTTCGTTCCG 60.000 52.381 0.00 0.00 0.00 4.30
1912 3556 1.270550 GTTGTACTCCCTTCGTTCCGA 59.729 52.381 0.00 0.00 0.00 4.55
1913 3557 1.619654 TGTACTCCCTTCGTTCCGAA 58.380 50.000 0.00 0.00 43.75 4.30
1914 3558 2.173519 TGTACTCCCTTCGTTCCGAAT 58.826 47.619 0.00 0.00 44.85 3.34
1915 3559 2.564062 TGTACTCCCTTCGTTCCGAATT 59.436 45.455 0.00 0.00 44.85 2.17
1916 3560 3.763360 TGTACTCCCTTCGTTCCGAATTA 59.237 43.478 0.00 0.00 44.85 1.40
1917 3561 3.242549 ACTCCCTTCGTTCCGAATTAC 57.757 47.619 0.00 0.00 44.85 1.89
1918 3562 2.830321 ACTCCCTTCGTTCCGAATTACT 59.170 45.455 0.00 0.00 44.85 2.24
1919 3563 3.260128 ACTCCCTTCGTTCCGAATTACTT 59.740 43.478 0.00 0.00 44.85 2.24
1920 3564 3.592059 TCCCTTCGTTCCGAATTACTTG 58.408 45.455 0.00 0.00 44.85 3.16
1921 3565 3.007182 TCCCTTCGTTCCGAATTACTTGT 59.993 43.478 0.00 0.00 44.85 3.16
1922 3566 3.370061 CCCTTCGTTCCGAATTACTTGTC 59.630 47.826 0.00 0.00 44.85 3.18
1923 3567 3.991773 CCTTCGTTCCGAATTACTTGTCA 59.008 43.478 0.00 0.00 44.85 3.58
1924 3568 4.630069 CCTTCGTTCCGAATTACTTGTCAT 59.370 41.667 0.00 0.00 44.85 3.06
1925 3569 5.808540 CCTTCGTTCCGAATTACTTGTCATA 59.191 40.000 0.00 0.00 44.85 2.15
1926 3570 6.237755 CCTTCGTTCCGAATTACTTGTCATAC 60.238 42.308 0.00 0.00 44.85 2.39
1927 3571 4.794762 TCGTTCCGAATTACTTGTCATACG 59.205 41.667 0.00 0.00 31.06 3.06
1928 3572 4.560035 CGTTCCGAATTACTTGTCATACGT 59.440 41.667 0.00 0.00 0.00 3.57
1929 3573 5.738693 CGTTCCGAATTACTTGTCATACGTA 59.261 40.000 0.00 0.00 0.00 3.57
1930 3574 6.415867 CGTTCCGAATTACTTGTCATACGTAT 59.584 38.462 1.14 1.14 0.00 3.06
1931 3575 7.553034 GTTCCGAATTACTTGTCATACGTATG 58.447 38.462 26.35 26.35 35.04 2.39
1932 3576 6.210796 TCCGAATTACTTGTCATACGTATGG 58.789 40.000 30.07 18.66 34.50 2.74
1933 3577 6.039605 TCCGAATTACTTGTCATACGTATGGA 59.960 38.462 30.07 17.28 34.50 3.41
1934 3578 6.866770 CCGAATTACTTGTCATACGTATGGAT 59.133 38.462 30.07 16.02 34.50 3.41
1935 3579 7.148804 CCGAATTACTTGTCATACGTATGGATG 60.149 40.741 30.07 21.07 34.50 3.51
1936 3580 7.381408 CGAATTACTTGTCATACGTATGGATGT 59.619 37.037 30.07 24.33 34.50 3.06
1937 3581 9.687210 GAATTACTTGTCATACGTATGGATGTA 57.313 33.333 30.07 23.56 34.50 2.29
1939 3583 9.856488 ATTACTTGTCATACGTATGGATGTATC 57.144 33.333 30.07 14.69 35.90 2.24
1940 3584 7.526142 ACTTGTCATACGTATGGATGTATCT 57.474 36.000 30.07 7.61 35.90 1.98
1941 3585 8.631480 ACTTGTCATACGTATGGATGTATCTA 57.369 34.615 30.07 9.32 35.90 1.98
1942 3586 8.731605 ACTTGTCATACGTATGGATGTATCTAG 58.268 37.037 30.07 18.94 35.90 2.43
1943 3587 8.857694 TTGTCATACGTATGGATGTATCTAGA 57.142 34.615 30.07 8.04 35.90 2.43
1944 3588 9.462606 TTGTCATACGTATGGATGTATCTAGAT 57.537 33.333 30.07 10.73 35.90 1.98
1945 3589 8.893727 TGTCATACGTATGGATGTATCTAGATG 58.106 37.037 30.07 6.60 35.90 2.90
1946 3590 8.894731 GTCATACGTATGGATGTATCTAGATGT 58.105 37.037 30.07 3.16 35.90 3.06
1978 3622 9.250624 AGTTTTAGATACATCTATTTCAGCGAC 57.749 33.333 0.00 0.00 39.02 5.19
1979 3623 7.853377 TTTAGATACATCTATTTCAGCGACG 57.147 36.000 0.00 0.00 39.02 5.12
1980 3624 5.690997 AGATACATCTATTTCAGCGACGA 57.309 39.130 0.00 0.00 34.85 4.20
1981 3625 5.694816 AGATACATCTATTTCAGCGACGAG 58.305 41.667 0.00 0.00 34.85 4.18
1982 3626 3.784701 ACATCTATTTCAGCGACGAGT 57.215 42.857 0.00 0.00 0.00 4.18
1983 3627 4.895224 ACATCTATTTCAGCGACGAGTA 57.105 40.909 0.00 0.00 0.00 2.59
1984 3628 5.244785 ACATCTATTTCAGCGACGAGTAA 57.755 39.130 0.00 0.00 0.00 2.24
1985 3629 5.833082 ACATCTATTTCAGCGACGAGTAAT 58.167 37.500 0.00 0.00 0.00 1.89
1986 3630 6.273825 ACATCTATTTCAGCGACGAGTAATT 58.726 36.000 0.00 0.00 0.00 1.40
1987 3631 6.757010 ACATCTATTTCAGCGACGAGTAATTT 59.243 34.615 0.00 0.00 0.00 1.82
1988 3632 6.569228 TCTATTTCAGCGACGAGTAATTTG 57.431 37.500 0.00 0.00 0.00 2.32
1989 3633 4.600012 ATTTCAGCGACGAGTAATTTGG 57.400 40.909 0.00 0.00 0.00 3.28
1990 3634 2.004583 TCAGCGACGAGTAATTTGGG 57.995 50.000 0.00 0.00 0.00 4.12
1991 3635 1.546923 TCAGCGACGAGTAATTTGGGA 59.453 47.619 0.00 0.00 0.00 4.37
1992 3636 1.659098 CAGCGACGAGTAATTTGGGAC 59.341 52.381 0.00 0.00 0.00 4.46
1993 3637 1.274167 AGCGACGAGTAATTTGGGACA 59.726 47.619 0.00 0.00 0.00 4.02
2030 3710 1.171308 GTCCACATGCACAGCAGAAT 58.829 50.000 0.00 0.00 43.65 2.40
2033 3713 2.749076 TCCACATGCACAGCAGAATTAC 59.251 45.455 0.00 0.00 43.65 1.89
2036 3716 4.577693 CCACATGCACAGCAGAATTACTAT 59.422 41.667 0.00 0.00 43.65 2.12
2076 3757 7.780008 TCGAGTATTTCTTTTCAAAGACACA 57.220 32.000 1.28 0.00 44.18 3.72
2084 3765 4.570772 TCTTTTCAAAGACACAGGAGAACG 59.429 41.667 0.00 0.00 39.95 3.95
2103 3784 3.411446 ACGGCTGTGATTTCATTGAAGA 58.589 40.909 0.00 0.00 0.00 2.87
2186 3870 3.164479 AGCTTTGCTCAGCCCTCA 58.836 55.556 0.00 0.00 41.12 3.86
2240 3924 2.749839 CCGAAATTGGGCAGCCGA 60.750 61.111 5.00 0.00 0.00 5.54
2266 3950 2.031012 CAGGTTGCTGCCTCGTCA 59.969 61.111 0.00 0.00 36.58 4.35
2267 3951 1.597854 CAGGTTGCTGCCTCGTCAA 60.598 57.895 0.00 0.00 36.58 3.18
2268 3952 1.302033 AGGTTGCTGCCTCGTCAAG 60.302 57.895 0.00 0.00 32.39 3.02
2279 3963 1.983972 CTCGTCAAGGAAGAAGTCGG 58.016 55.000 0.00 0.00 0.00 4.79
2280 3964 1.269998 CTCGTCAAGGAAGAAGTCGGT 59.730 52.381 0.00 0.00 0.00 4.69
2281 3965 1.268899 TCGTCAAGGAAGAAGTCGGTC 59.731 52.381 0.00 0.00 0.00 4.79
2282 3966 1.000607 CGTCAAGGAAGAAGTCGGTCA 60.001 52.381 0.00 0.00 0.00 4.02
2283 3967 2.405172 GTCAAGGAAGAAGTCGGTCAC 58.595 52.381 0.00 0.00 0.00 3.67
2284 3968 1.343465 TCAAGGAAGAAGTCGGTCACC 59.657 52.381 0.00 0.00 0.00 4.02
2285 3969 0.685660 AAGGAAGAAGTCGGTCACCC 59.314 55.000 0.00 0.00 0.00 4.61
2286 3970 0.178929 AGGAAGAAGTCGGTCACCCT 60.179 55.000 0.00 0.00 0.00 4.34
2287 3971 0.685660 GGAAGAAGTCGGTCACCCTT 59.314 55.000 0.00 0.00 0.00 3.95
2288 3972 1.608283 GGAAGAAGTCGGTCACCCTTG 60.608 57.143 0.00 0.00 0.00 3.61
2289 3973 0.250338 AAGAAGTCGGTCACCCTTGC 60.250 55.000 0.00 0.00 0.00 4.01
2290 3974 1.122019 AGAAGTCGGTCACCCTTGCT 61.122 55.000 0.00 0.00 0.00 3.91
2291 3975 0.250338 GAAGTCGGTCACCCTTGCTT 60.250 55.000 0.00 0.00 0.00 3.91
2292 3976 1.001633 GAAGTCGGTCACCCTTGCTTA 59.998 52.381 0.00 0.00 0.00 3.09
2293 3977 1.053424 AGTCGGTCACCCTTGCTTAA 58.947 50.000 0.00 0.00 0.00 1.85
2294 3978 1.002087 AGTCGGTCACCCTTGCTTAAG 59.998 52.381 0.00 0.00 0.00 1.85
2295 3979 1.053424 TCGGTCACCCTTGCTTAAGT 58.947 50.000 4.02 0.00 0.00 2.24
2296 3980 2.028748 GTCGGTCACCCTTGCTTAAGTA 60.029 50.000 4.02 0.00 0.00 2.24
2297 3981 2.232941 TCGGTCACCCTTGCTTAAGTAG 59.767 50.000 4.02 2.33 0.00 2.57
2298 3982 2.232941 CGGTCACCCTTGCTTAAGTAGA 59.767 50.000 4.02 0.00 0.00 2.59
2299 3983 3.676324 CGGTCACCCTTGCTTAAGTAGAG 60.676 52.174 4.02 0.77 0.00 2.43
2300 3984 3.369576 GGTCACCCTTGCTTAAGTAGAGG 60.370 52.174 4.02 9.07 0.00 3.69
2301 3985 3.261137 GTCACCCTTGCTTAAGTAGAGGT 59.739 47.826 9.78 9.78 0.00 3.85
2302 3986 3.260884 TCACCCTTGCTTAAGTAGAGGTG 59.739 47.826 25.36 25.36 43.89 4.00
2303 3987 2.572104 ACCCTTGCTTAAGTAGAGGTGG 59.428 50.000 13.45 6.88 0.00 4.61
2304 3988 2.572104 CCCTTGCTTAAGTAGAGGTGGT 59.428 50.000 15.35 0.00 0.00 4.16
2305 3989 3.369576 CCCTTGCTTAAGTAGAGGTGGTC 60.370 52.174 15.35 0.00 0.00 4.02
2306 3990 3.369576 CCTTGCTTAAGTAGAGGTGGTCC 60.370 52.174 4.02 0.00 0.00 4.46
2307 3991 2.897350 TGCTTAAGTAGAGGTGGTCCA 58.103 47.619 4.02 0.00 35.89 4.02
2308 3992 2.565834 TGCTTAAGTAGAGGTGGTCCAC 59.434 50.000 14.13 14.13 35.89 4.02
2309 3993 2.832733 GCTTAAGTAGAGGTGGTCCACT 59.167 50.000 21.40 7.76 38.21 4.00
2310 3994 3.368531 GCTTAAGTAGAGGTGGTCCACTG 60.369 52.174 21.40 1.60 36.19 3.66
2311 3995 1.645710 AAGTAGAGGTGGTCCACTGG 58.354 55.000 21.40 0.00 36.19 4.00
2312 3996 0.252284 AGTAGAGGTGGTCCACTGGG 60.252 60.000 21.40 0.00 36.19 4.45
2313 3997 1.080354 TAGAGGTGGTCCACTGGGG 59.920 63.158 21.40 0.00 36.19 4.96
2314 3998 4.035102 GAGGTGGTCCACTGGGGC 62.035 72.222 21.40 4.57 38.40 5.80
2321 4005 4.642488 TCCACTGGGGCCCACGTA 62.642 66.667 24.76 7.33 36.21 3.57
2322 4006 3.407967 CCACTGGGGCCCACGTAT 61.408 66.667 24.76 4.36 0.00 3.06
2323 4007 2.674754 CACTGGGGCCCACGTATT 59.325 61.111 24.76 0.00 0.00 1.89
2324 4008 1.001393 CACTGGGGCCCACGTATTT 60.001 57.895 24.76 0.00 0.00 1.40
2325 4009 1.001393 ACTGGGGCCCACGTATTTG 60.001 57.895 24.76 13.14 0.00 2.32
2326 4010 1.752694 CTGGGGCCCACGTATTTGG 60.753 63.158 24.76 5.29 36.26 3.28
2327 4011 2.204865 CTGGGGCCCACGTATTTGGA 62.205 60.000 24.76 0.00 39.24 3.53
2328 4012 1.000646 GGGGCCCACGTATTTGGAA 60.001 57.895 26.86 0.00 39.24 3.53
2329 4013 1.035385 GGGGCCCACGTATTTGGAAG 61.035 60.000 26.86 0.00 39.24 3.46
2330 4014 1.035385 GGGCCCACGTATTTGGAAGG 61.035 60.000 19.95 0.00 39.24 3.46
2331 4015 1.663379 GGCCCACGTATTTGGAAGGC 61.663 60.000 0.00 0.00 39.24 4.35
2332 4016 0.679960 GCCCACGTATTTGGAAGGCT 60.680 55.000 0.00 0.00 39.24 4.58
2333 4017 1.407712 GCCCACGTATTTGGAAGGCTA 60.408 52.381 0.00 0.00 39.24 3.93
2334 4018 2.748465 GCCCACGTATTTGGAAGGCTAT 60.748 50.000 0.00 0.00 39.24 2.97
2335 4019 3.139077 CCCACGTATTTGGAAGGCTATC 58.861 50.000 0.00 0.00 39.24 2.08
2336 4020 2.800544 CCACGTATTTGGAAGGCTATCG 59.199 50.000 0.00 0.00 39.24 2.92
2337 4021 3.454375 CACGTATTTGGAAGGCTATCGT 58.546 45.455 0.00 0.00 0.00 3.73
2338 4022 3.245284 CACGTATTTGGAAGGCTATCGTG 59.755 47.826 0.00 0.00 39.57 4.35
2339 4023 2.800544 CGTATTTGGAAGGCTATCGTGG 59.199 50.000 0.00 0.00 0.00 4.94
2340 4024 3.740141 CGTATTTGGAAGGCTATCGTGGT 60.740 47.826 0.00 0.00 0.00 4.16
2341 4025 2.107950 TTTGGAAGGCTATCGTGGTG 57.892 50.000 0.00 0.00 0.00 4.17
2342 4026 0.251916 TTGGAAGGCTATCGTGGTGG 59.748 55.000 0.00 0.00 0.00 4.61
2343 4027 1.523938 GGAAGGCTATCGTGGTGGC 60.524 63.158 0.00 0.00 0.00 5.01
2344 4028 1.522569 GAAGGCTATCGTGGTGGCT 59.477 57.895 0.00 0.00 38.25 4.75
2345 4029 0.530870 GAAGGCTATCGTGGTGGCTC 60.531 60.000 0.00 0.00 35.53 4.70
2346 4030 1.264749 AAGGCTATCGTGGTGGCTCA 61.265 55.000 0.00 0.00 35.53 4.26
2347 4031 1.220749 GGCTATCGTGGTGGCTCAA 59.779 57.895 0.00 0.00 0.00 3.02
2348 4032 0.811616 GGCTATCGTGGTGGCTCAAG 60.812 60.000 0.00 0.00 0.00 3.02
2349 4033 0.175760 GCTATCGTGGTGGCTCAAGA 59.824 55.000 0.82 0.82 0.00 3.02
2350 4034 1.927895 CTATCGTGGTGGCTCAAGAC 58.072 55.000 0.41 0.00 0.00 3.01
2351 4035 1.478510 CTATCGTGGTGGCTCAAGACT 59.521 52.381 0.41 0.00 0.00 3.24
2352 4036 0.036952 ATCGTGGTGGCTCAAGACTG 60.037 55.000 0.41 0.00 0.00 3.51
2353 4037 1.669115 CGTGGTGGCTCAAGACTGG 60.669 63.158 0.00 0.00 0.00 4.00
2354 4038 1.451936 GTGGTGGCTCAAGACTGGT 59.548 57.895 0.00 0.00 0.00 4.00
2355 4039 0.685097 GTGGTGGCTCAAGACTGGTA 59.315 55.000 0.00 0.00 0.00 3.25
2356 4040 1.279271 GTGGTGGCTCAAGACTGGTAT 59.721 52.381 0.00 0.00 0.00 2.73
2357 4041 2.500098 GTGGTGGCTCAAGACTGGTATA 59.500 50.000 0.00 0.00 0.00 1.47
2358 4042 2.500098 TGGTGGCTCAAGACTGGTATAC 59.500 50.000 0.00 0.00 0.00 1.47
2359 4043 2.766828 GGTGGCTCAAGACTGGTATACT 59.233 50.000 2.25 0.00 0.00 2.12
2360 4044 3.430929 GGTGGCTCAAGACTGGTATACTG 60.431 52.174 2.25 0.00 0.00 2.74
2361 4045 2.168521 TGGCTCAAGACTGGTATACTGC 59.831 50.000 2.25 0.00 0.00 4.40
2362 4046 2.168521 GGCTCAAGACTGGTATACTGCA 59.831 50.000 2.25 0.00 0.00 4.41
2363 4047 3.190874 GCTCAAGACTGGTATACTGCAC 58.809 50.000 2.25 0.00 0.00 4.57
2364 4048 3.786635 CTCAAGACTGGTATACTGCACC 58.213 50.000 2.25 0.00 36.54 5.01
2365 4049 3.169908 TCAAGACTGGTATACTGCACCA 58.830 45.455 2.25 0.00 43.82 4.17
2375 4059 6.993079 TGGTATACTGCACCAGTCTATATTG 58.007 40.000 2.25 0.00 41.21 1.90
2376 4060 6.780522 TGGTATACTGCACCAGTCTATATTGA 59.219 38.462 2.25 0.00 41.21 2.57
2377 4061 7.039714 TGGTATACTGCACCAGTCTATATTGAG 60.040 40.741 2.25 0.00 41.21 3.02
2378 4062 4.065321 ACTGCACCAGTCTATATTGAGC 57.935 45.455 0.00 0.00 41.21 4.26
2379 4063 3.181461 ACTGCACCAGTCTATATTGAGCC 60.181 47.826 0.00 0.00 41.21 4.70
2380 4064 2.771372 TGCACCAGTCTATATTGAGCCA 59.229 45.455 0.00 0.00 0.00 4.75
2381 4065 3.392285 TGCACCAGTCTATATTGAGCCAT 59.608 43.478 0.00 0.00 0.00 4.40
2382 4066 4.592778 TGCACCAGTCTATATTGAGCCATA 59.407 41.667 0.00 0.00 0.00 2.74
2383 4067 5.249163 TGCACCAGTCTATATTGAGCCATAT 59.751 40.000 0.00 0.00 0.00 1.78
2384 4068 6.440328 TGCACCAGTCTATATTGAGCCATATA 59.560 38.462 0.00 0.00 0.00 0.86
2385 4069 6.758886 GCACCAGTCTATATTGAGCCATATAC 59.241 42.308 0.00 0.00 0.00 1.47
2386 4070 7.579531 GCACCAGTCTATATTGAGCCATATACA 60.580 40.741 0.00 0.00 0.00 2.29
2387 4071 8.481314 CACCAGTCTATATTGAGCCATATACAT 58.519 37.037 0.00 0.00 0.00 2.29
2388 4072 8.700051 ACCAGTCTATATTGAGCCATATACATC 58.300 37.037 0.00 0.00 0.00 3.06
2389 4073 8.699130 CCAGTCTATATTGAGCCATATACATCA 58.301 37.037 0.00 0.00 0.00 3.07
2396 4080 6.785488 TTGAGCCATATACATCAATTCGTC 57.215 37.500 0.00 0.00 0.00 4.20
2397 4081 5.852827 TGAGCCATATACATCAATTCGTCA 58.147 37.500 0.00 0.00 0.00 4.35
2398 4082 5.928264 TGAGCCATATACATCAATTCGTCAG 59.072 40.000 0.00 0.00 0.00 3.51
2399 4083 6.101650 AGCCATATACATCAATTCGTCAGA 57.898 37.500 0.00 0.00 0.00 3.27
2400 4084 5.928839 AGCCATATACATCAATTCGTCAGAC 59.071 40.000 0.00 0.00 0.00 3.51
2401 4085 5.696270 GCCATATACATCAATTCGTCAGACA 59.304 40.000 0.41 0.00 0.00 3.41
2402 4086 6.202762 GCCATATACATCAATTCGTCAGACAA 59.797 38.462 0.41 0.00 0.00 3.18
2403 4087 7.095060 GCCATATACATCAATTCGTCAGACAAT 60.095 37.037 0.41 0.00 0.00 2.71
2404 4088 8.777413 CCATATACATCAATTCGTCAGACAATT 58.223 33.333 0.41 3.65 0.00 2.32
2407 4091 5.702865 ACATCAATTCGTCAGACAATTTGG 58.297 37.500 0.41 1.90 0.00 3.28
2408 4092 4.159377 TCAATTCGTCAGACAATTTGGC 57.841 40.909 0.41 0.00 0.00 4.52
2409 4093 3.057596 TCAATTCGTCAGACAATTTGGCC 60.058 43.478 0.00 0.00 0.00 5.36
2410 4094 0.871722 TTCGTCAGACAATTTGGCCG 59.128 50.000 0.00 0.00 0.00 6.13
2411 4095 1.154225 CGTCAGACAATTTGGCCGC 60.154 57.895 0.00 0.00 0.00 6.53
2412 4096 1.851021 CGTCAGACAATTTGGCCGCA 61.851 55.000 0.00 0.00 0.00 5.69
2413 4097 0.387239 GTCAGACAATTTGGCCGCAC 60.387 55.000 0.00 0.00 0.00 5.34
2414 4098 0.821301 TCAGACAATTTGGCCGCACA 60.821 50.000 0.00 0.00 0.00 4.57
2415 4099 0.244450 CAGACAATTTGGCCGCACAT 59.756 50.000 0.00 0.00 0.00 3.21
2416 4100 1.472082 CAGACAATTTGGCCGCACATA 59.528 47.619 0.00 0.00 0.00 2.29
2417 4101 2.094803 CAGACAATTTGGCCGCACATAA 60.095 45.455 0.00 0.00 0.00 1.90
2418 4102 2.760092 AGACAATTTGGCCGCACATAAT 59.240 40.909 0.00 0.00 0.00 1.28
2419 4103 2.859538 GACAATTTGGCCGCACATAATG 59.140 45.455 0.00 0.00 0.00 1.90
2420 4104 2.233431 ACAATTTGGCCGCACATAATGT 59.767 40.909 0.00 0.00 0.00 2.71
2421 4105 3.445450 ACAATTTGGCCGCACATAATGTA 59.555 39.130 0.00 0.00 0.00 2.29
2422 4106 4.099266 ACAATTTGGCCGCACATAATGTAT 59.901 37.500 0.00 0.00 0.00 2.29
2423 4107 3.980646 TTTGGCCGCACATAATGTATC 57.019 42.857 0.00 0.00 0.00 2.24
2424 4108 1.890876 TGGCCGCACATAATGTATCC 58.109 50.000 0.00 0.00 0.00 2.59
2425 4109 1.165270 GGCCGCACATAATGTATCCC 58.835 55.000 0.00 0.00 0.00 3.85
2426 4110 1.165270 GCCGCACATAATGTATCCCC 58.835 55.000 0.00 0.00 0.00 4.81
2427 4111 1.438651 CCGCACATAATGTATCCCCG 58.561 55.000 0.00 0.00 0.00 5.73
2428 4112 1.270625 CCGCACATAATGTATCCCCGT 60.271 52.381 0.00 0.00 0.00 5.28
2429 4113 2.489971 CGCACATAATGTATCCCCGTT 58.510 47.619 0.00 0.00 0.00 4.44
2430 4114 2.478894 CGCACATAATGTATCCCCGTTC 59.521 50.000 0.00 0.00 0.00 3.95
2431 4115 2.812011 GCACATAATGTATCCCCGTTCC 59.188 50.000 0.00 0.00 0.00 3.62
2432 4116 3.746114 GCACATAATGTATCCCCGTTCCA 60.746 47.826 0.00 0.00 0.00 3.53
2433 4117 3.813166 CACATAATGTATCCCCGTTCCAC 59.187 47.826 0.00 0.00 0.00 4.02
2434 4118 3.456644 ACATAATGTATCCCCGTTCCACA 59.543 43.478 0.00 0.00 0.00 4.17
2435 4119 4.080243 ACATAATGTATCCCCGTTCCACAA 60.080 41.667 0.00 0.00 0.00 3.33
2436 4120 2.710096 ATGTATCCCCGTTCCACAAG 57.290 50.000 0.00 0.00 0.00 3.16
2437 4121 1.646912 TGTATCCCCGTTCCACAAGA 58.353 50.000 0.00 0.00 0.00 3.02
2438 4122 1.276989 TGTATCCCCGTTCCACAAGAC 59.723 52.381 0.00 0.00 0.00 3.01
2439 4123 1.276989 GTATCCCCGTTCCACAAGACA 59.723 52.381 0.00 0.00 0.00 3.41
2440 4124 0.036306 ATCCCCGTTCCACAAGACAC 59.964 55.000 0.00 0.00 0.00 3.67
2441 4125 1.052124 TCCCCGTTCCACAAGACACT 61.052 55.000 0.00 0.00 0.00 3.55
2442 4126 0.179029 CCCCGTTCCACAAGACACTT 60.179 55.000 0.00 0.00 0.00 3.16
2443 4127 1.071071 CCCCGTTCCACAAGACACTTA 59.929 52.381 0.00 0.00 0.00 2.24
2444 4128 2.485835 CCCCGTTCCACAAGACACTTAA 60.486 50.000 0.00 0.00 0.00 1.85
2445 4129 3.408634 CCCGTTCCACAAGACACTTAAT 58.591 45.455 0.00 0.00 0.00 1.40
2446 4130 3.435671 CCCGTTCCACAAGACACTTAATC 59.564 47.826 0.00 0.00 0.00 1.75
2447 4131 4.062293 CCGTTCCACAAGACACTTAATCA 58.938 43.478 0.00 0.00 0.00 2.57
2448 4132 4.513692 CCGTTCCACAAGACACTTAATCAA 59.486 41.667 0.00 0.00 0.00 2.57
2449 4133 5.440685 CGTTCCACAAGACACTTAATCAAC 58.559 41.667 0.00 0.00 0.00 3.18
2450 4134 5.560183 CGTTCCACAAGACACTTAATCAACC 60.560 44.000 0.00 0.00 0.00 3.77
2451 4135 4.394729 TCCACAAGACACTTAATCAACCC 58.605 43.478 0.00 0.00 0.00 4.11
2452 4136 4.104102 TCCACAAGACACTTAATCAACCCT 59.896 41.667 0.00 0.00 0.00 4.34
2453 4137 4.216257 CCACAAGACACTTAATCAACCCTG 59.784 45.833 0.00 0.00 0.00 4.45
2454 4138 5.063204 CACAAGACACTTAATCAACCCTGA 58.937 41.667 0.00 0.00 35.56 3.86
2455 4139 5.530915 CACAAGACACTTAATCAACCCTGAA 59.469 40.000 0.00 0.00 34.49 3.02
2456 4140 6.039270 CACAAGACACTTAATCAACCCTGAAA 59.961 38.462 0.00 0.00 34.49 2.69
2457 4141 6.039382 ACAAGACACTTAATCAACCCTGAAAC 59.961 38.462 0.00 0.00 34.49 2.78
2458 4142 5.690865 AGACACTTAATCAACCCTGAAACA 58.309 37.500 0.00 0.00 34.49 2.83
2459 4143 5.531287 AGACACTTAATCAACCCTGAAACAC 59.469 40.000 0.00 0.00 34.49 3.32
2460 4144 5.197451 ACACTTAATCAACCCTGAAACACA 58.803 37.500 0.00 0.00 34.49 3.72
2461 4145 5.654650 ACACTTAATCAACCCTGAAACACAA 59.345 36.000 0.00 0.00 34.49 3.33
2462 4146 6.183360 ACACTTAATCAACCCTGAAACACAAG 60.183 38.462 0.00 0.00 34.49 3.16
2463 4147 6.039270 CACTTAATCAACCCTGAAACACAAGA 59.961 38.462 0.00 0.00 34.49 3.02
2464 4148 6.263168 ACTTAATCAACCCTGAAACACAAGAG 59.737 38.462 0.00 0.00 34.49 2.85
2465 4149 3.924114 TCAACCCTGAAACACAAGAGA 57.076 42.857 0.00 0.00 0.00 3.10
2466 4150 4.229304 TCAACCCTGAAACACAAGAGAA 57.771 40.909 0.00 0.00 0.00 2.87
2467 4151 3.945285 TCAACCCTGAAACACAAGAGAAC 59.055 43.478 0.00 0.00 0.00 3.01
2468 4152 2.932261 ACCCTGAAACACAAGAGAACC 58.068 47.619 0.00 0.00 0.00 3.62
2469 4153 2.230660 CCCTGAAACACAAGAGAACCC 58.769 52.381 0.00 0.00 0.00 4.11
2470 4154 2.158608 CCCTGAAACACAAGAGAACCCT 60.159 50.000 0.00 0.00 0.00 4.34
2471 4155 3.555966 CCTGAAACACAAGAGAACCCTT 58.444 45.455 0.00 0.00 0.00 3.95
2472 4156 3.954258 CCTGAAACACAAGAGAACCCTTT 59.046 43.478 0.00 0.00 0.00 3.11
2473 4157 4.036852 CCTGAAACACAAGAGAACCCTTTC 59.963 45.833 0.00 0.00 0.00 2.62
2474 4158 3.951680 TGAAACACAAGAGAACCCTTTCC 59.048 43.478 0.00 0.00 31.28 3.13
2475 4159 3.662759 AACACAAGAGAACCCTTTCCA 57.337 42.857 0.00 0.00 31.28 3.53
2476 4160 3.214696 ACACAAGAGAACCCTTTCCAG 57.785 47.619 0.00 0.00 31.28 3.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
487 1668 9.187455 GAATTGCTCATAACTTTTAAACCGAAA 57.813 29.630 0.00 0.00 0.00 3.46
589 1916 4.519350 CGCAGGGAGTAGTACATCATTAGA 59.481 45.833 2.52 0.00 0.00 2.10
593 1920 2.667470 ACGCAGGGAGTAGTACATCAT 58.333 47.619 2.52 0.00 0.00 2.45
596 1923 1.755380 GGAACGCAGGGAGTAGTACAT 59.245 52.381 2.52 0.00 0.00 2.29
604 1931 2.678336 GTCTATTTTGGAACGCAGGGAG 59.322 50.000 0.00 0.00 0.00 4.30
607 1934 2.159707 CGTGTCTATTTTGGAACGCAGG 60.160 50.000 0.00 0.00 0.00 4.85
608 1935 2.159707 CCGTGTCTATTTTGGAACGCAG 60.160 50.000 0.00 0.00 0.00 5.18
609 1936 1.801771 CCGTGTCTATTTTGGAACGCA 59.198 47.619 0.00 0.00 0.00 5.24
610 1937 2.070783 TCCGTGTCTATTTTGGAACGC 58.929 47.619 0.00 0.00 0.00 4.84
611 1938 3.061322 TGTCCGTGTCTATTTTGGAACG 58.939 45.455 0.00 0.00 0.00 3.95
612 1939 4.142687 CCATGTCCGTGTCTATTTTGGAAC 60.143 45.833 0.00 0.00 0.00 3.62
613 1940 4.006989 CCATGTCCGTGTCTATTTTGGAA 58.993 43.478 0.00 0.00 0.00 3.53
614 1941 3.262151 TCCATGTCCGTGTCTATTTTGGA 59.738 43.478 0.00 0.00 0.00 3.53
615 1942 3.605634 TCCATGTCCGTGTCTATTTTGG 58.394 45.455 0.00 0.00 0.00 3.28
616 1943 4.435518 CGTTCCATGTCCGTGTCTATTTTG 60.436 45.833 0.00 0.00 0.00 2.44
617 1944 3.682858 CGTTCCATGTCCGTGTCTATTTT 59.317 43.478 0.00 0.00 0.00 1.82
618 1945 3.259064 CGTTCCATGTCCGTGTCTATTT 58.741 45.455 0.00 0.00 0.00 1.40
619 1946 2.418197 CCGTTCCATGTCCGTGTCTATT 60.418 50.000 0.00 0.00 0.00 1.73
620 1947 1.136305 CCGTTCCATGTCCGTGTCTAT 59.864 52.381 0.00 0.00 0.00 1.98
621 1948 0.528924 CCGTTCCATGTCCGTGTCTA 59.471 55.000 0.00 0.00 0.00 2.59
622 1949 1.183030 TCCGTTCCATGTCCGTGTCT 61.183 55.000 0.00 0.00 0.00 3.41
623 1950 0.736325 CTCCGTTCCATGTCCGTGTC 60.736 60.000 0.00 0.00 0.00 3.67
624 1951 1.292223 CTCCGTTCCATGTCCGTGT 59.708 57.895 0.00 0.00 0.00 4.49
625 1952 1.447838 CCTCCGTTCCATGTCCGTG 60.448 63.158 0.00 0.00 0.00 4.94
626 1953 2.656069 CCCTCCGTTCCATGTCCGT 61.656 63.158 0.00 0.00 0.00 4.69
627 1954 2.186903 CCCTCCGTTCCATGTCCG 59.813 66.667 0.00 0.00 0.00 4.79
628 1955 1.265454 ACTCCCTCCGTTCCATGTCC 61.265 60.000 0.00 0.00 0.00 4.02
629 1956 1.481871 TACTCCCTCCGTTCCATGTC 58.518 55.000 0.00 0.00 0.00 3.06
630 1957 2.176247 ATACTCCCTCCGTTCCATGT 57.824 50.000 0.00 0.00 0.00 3.21
631 1958 3.118408 TCAAATACTCCCTCCGTTCCATG 60.118 47.826 0.00 0.00 0.00 3.66
632 1959 3.112263 TCAAATACTCCCTCCGTTCCAT 58.888 45.455 0.00 0.00 0.00 3.41
633 1960 2.500098 CTCAAATACTCCCTCCGTTCCA 59.500 50.000 0.00 0.00 0.00 3.53
634 1961 2.500504 ACTCAAATACTCCCTCCGTTCC 59.499 50.000 0.00 0.00 0.00 3.62
635 1962 3.194968 TCACTCAAATACTCCCTCCGTTC 59.805 47.826 0.00 0.00 0.00 3.95
636 1963 3.170717 TCACTCAAATACTCCCTCCGTT 58.829 45.455 0.00 0.00 0.00 4.44
637 1964 2.816411 TCACTCAAATACTCCCTCCGT 58.184 47.619 0.00 0.00 0.00 4.69
638 1965 3.887621 TTCACTCAAATACTCCCTCCG 57.112 47.619 0.00 0.00 0.00 4.63
639 1966 3.942115 GCTTTCACTCAAATACTCCCTCC 59.058 47.826 0.00 0.00 0.00 4.30
640 1967 4.579869 TGCTTTCACTCAAATACTCCCTC 58.420 43.478 0.00 0.00 0.00 4.30
641 1968 4.640771 TGCTTTCACTCAAATACTCCCT 57.359 40.909 0.00 0.00 0.00 4.20
642 1969 4.336713 GGATGCTTTCACTCAAATACTCCC 59.663 45.833 0.00 0.00 0.00 4.30
643 1970 5.189180 AGGATGCTTTCACTCAAATACTCC 58.811 41.667 0.00 0.00 0.00 3.85
644 1971 6.112058 AGAGGATGCTTTCACTCAAATACTC 58.888 40.000 0.00 0.00 32.52 2.59
645 1972 6.059787 AGAGGATGCTTTCACTCAAATACT 57.940 37.500 0.00 0.00 32.52 2.12
646 1973 7.044798 AGTAGAGGATGCTTTCACTCAAATAC 58.955 38.462 0.00 0.00 32.52 1.89
647 1974 7.187824 AGTAGAGGATGCTTTCACTCAAATA 57.812 36.000 0.00 0.00 32.52 1.40
648 1975 6.059787 AGTAGAGGATGCTTTCACTCAAAT 57.940 37.500 0.00 0.00 32.52 2.32
649 1976 5.489792 AGTAGAGGATGCTTTCACTCAAA 57.510 39.130 0.00 0.00 32.52 2.69
650 1977 5.717178 ACTAGTAGAGGATGCTTTCACTCAA 59.283 40.000 3.59 0.00 32.52 3.02
726 2053 5.426509 TCCATTCACAGTTGGAGATACAGAT 59.573 40.000 0.00 0.00 37.10 2.90
740 2067 9.642327 TGTGATGAAAATAAAATCCATTCACAG 57.358 29.630 0.00 0.00 33.29 3.66
763 2090 6.587990 ACATCTCAGACTTTAAGATTCGTGTG 59.412 38.462 0.00 0.00 0.00 3.82
764 2091 6.692486 ACATCTCAGACTTTAAGATTCGTGT 58.308 36.000 0.00 0.00 0.00 4.49
785 2112 3.480470 CGGCAAAGGATCCATCTTACAT 58.520 45.455 15.82 0.00 0.00 2.29
855 2182 1.929836 GCGTGCTTGTCTATTCTGGAG 59.070 52.381 0.00 0.00 0.00 3.86
898 2225 0.239879 CATTTTGTAGCGCACCGGTT 59.760 50.000 11.47 0.00 38.83 4.44
905 2232 1.064060 CTAGGCCACATTTTGTAGCGC 59.936 52.381 5.01 0.00 35.84 5.92
907 2234 2.683362 GTCCTAGGCCACATTTTGTAGC 59.317 50.000 5.01 0.00 34.24 3.58
911 2238 3.306019 GGTTTGTCCTAGGCCACATTTTG 60.306 47.826 5.01 0.00 0.00 2.44
917 2244 0.035739 TTCGGTTTGTCCTAGGCCAC 59.964 55.000 5.01 0.00 0.00 5.01
924 2251 0.400213 TGGATGCTTCGGTTTGTCCT 59.600 50.000 0.00 0.00 0.00 3.85
925 2252 1.401905 GATGGATGCTTCGGTTTGTCC 59.598 52.381 0.00 0.00 0.00 4.02
927 2254 1.463674 GGATGGATGCTTCGGTTTGT 58.536 50.000 0.00 0.00 0.00 2.83
930 2257 1.227383 GGGGATGGATGCTTCGGTT 59.773 57.895 0.00 0.00 0.00 4.44
931 2258 1.694169 AGGGGATGGATGCTTCGGT 60.694 57.895 0.00 0.00 0.00 4.69
976 2343 4.399180 TCGAGTTGAGCGAGGACT 57.601 55.556 0.00 0.00 33.33 3.85
1026 2393 0.690762 CAAGGGAGAAGGGGTCGAAA 59.309 55.000 0.00 0.00 0.00 3.46
1091 2458 1.892819 CGAGGGGAAGAAGCTGCTGA 61.893 60.000 1.35 0.00 0.00 4.26
1215 2591 2.373502 CTCCACCTTCACTTCCTCCTTT 59.626 50.000 0.00 0.00 0.00 3.11
1441 2817 1.617947 ATGGACTTGACCTCCGGCTC 61.618 60.000 0.00 0.00 0.00 4.70
1446 2822 1.573108 TCTGGATGGACTTGACCTCC 58.427 55.000 0.00 0.00 0.00 4.30
1490 2866 0.458543 GAGCAGCGAATCGAACCTCA 60.459 55.000 6.91 0.00 0.00 3.86
1491 2867 0.179124 AGAGCAGCGAATCGAACCTC 60.179 55.000 6.91 7.74 0.00 3.85
1498 2879 1.005340 CAACCTCAGAGCAGCGAATC 58.995 55.000 0.00 0.00 0.00 2.52
1527 2908 3.059325 CCTTTGAGCAGAAGTCACGAAAG 60.059 47.826 0.00 0.00 0.00 2.62
1531 2912 0.514691 GCCTTTGAGCAGAAGTCACG 59.485 55.000 0.00 0.00 0.00 4.35
1539 2920 4.095483 CACTTATTACAGGCCTTTGAGCAG 59.905 45.833 0.00 0.00 0.00 4.24
1582 3031 1.152963 ACAAGGGCACACTCACACC 60.153 57.895 0.00 0.00 0.00 4.16
1665 3292 3.059884 AGTACACAAGTTGATCACAGCG 58.940 45.455 10.54 0.00 32.59 5.18
1725 3352 7.246311 TCTAGACTACAAGTAATTCCGAAACG 58.754 38.462 0.00 0.00 0.00 3.60
1728 3355 9.399797 TGTATCTAGACTACAAGTAATTCCGAA 57.600 33.333 0.00 0.00 0.00 4.30
1729 3356 8.969260 TGTATCTAGACTACAAGTAATTCCGA 57.031 34.615 0.00 0.00 0.00 4.55
1730 3357 9.828852 GATGTATCTAGACTACAAGTAATTCCG 57.171 37.037 14.78 0.00 33.12 4.30
1737 3364 8.643324 GGAAATGGATGTATCTAGACTACAAGT 58.357 37.037 14.78 4.60 33.12 3.16
1738 3365 7.810282 CGGAAATGGATGTATCTAGACTACAAG 59.190 40.741 14.78 0.00 33.12 3.16
1739 3366 7.287005 ACGGAAATGGATGTATCTAGACTACAA 59.713 37.037 14.78 4.48 33.12 2.41
1740 3367 6.776116 ACGGAAATGGATGTATCTAGACTACA 59.224 38.462 13.76 13.76 33.86 2.74
1741 3368 7.040617 TCACGGAAATGGATGTATCTAGACTAC 60.041 40.741 0.00 0.16 0.00 2.73
1742 3369 7.002276 TCACGGAAATGGATGTATCTAGACTA 58.998 38.462 0.00 0.00 0.00 2.59
1743 3370 5.833667 TCACGGAAATGGATGTATCTAGACT 59.166 40.000 0.00 0.00 0.00 3.24
1744 3371 5.921408 GTCACGGAAATGGATGTATCTAGAC 59.079 44.000 0.00 0.00 0.00 2.59
1745 3372 5.596772 TGTCACGGAAATGGATGTATCTAGA 59.403 40.000 0.00 0.00 0.00 2.43
1746 3373 5.842907 TGTCACGGAAATGGATGTATCTAG 58.157 41.667 0.00 0.00 0.00 2.43
1747 3374 5.862678 TGTCACGGAAATGGATGTATCTA 57.137 39.130 0.00 0.00 0.00 1.98
1748 3375 4.753516 TGTCACGGAAATGGATGTATCT 57.246 40.909 0.00 0.00 0.00 1.98
1749 3376 4.876107 ACTTGTCACGGAAATGGATGTATC 59.124 41.667 0.00 0.00 0.00 2.24
1750 3377 4.843728 ACTTGTCACGGAAATGGATGTAT 58.156 39.130 0.00 0.00 0.00 2.29
1751 3378 4.280436 ACTTGTCACGGAAATGGATGTA 57.720 40.909 0.00 0.00 0.00 2.29
1752 3379 3.140325 ACTTGTCACGGAAATGGATGT 57.860 42.857 0.00 0.00 0.00 3.06
1753 3380 5.818136 ATTACTTGTCACGGAAATGGATG 57.182 39.130 0.00 0.00 0.00 3.51
1754 3381 5.357032 GGAATTACTTGTCACGGAAATGGAT 59.643 40.000 0.00 0.00 0.00 3.41
1755 3382 4.698304 GGAATTACTTGTCACGGAAATGGA 59.302 41.667 0.00 0.00 0.00 3.41
1756 3383 4.436852 CGGAATTACTTGTCACGGAAATGG 60.437 45.833 0.00 0.00 0.00 3.16
1757 3384 4.390603 TCGGAATTACTTGTCACGGAAATG 59.609 41.667 0.00 0.00 0.00 2.32
1758 3385 4.571919 TCGGAATTACTTGTCACGGAAAT 58.428 39.130 0.00 0.00 0.00 2.17
1759 3386 3.992643 TCGGAATTACTTGTCACGGAAA 58.007 40.909 0.00 0.00 0.00 3.13
1760 3387 3.663995 TCGGAATTACTTGTCACGGAA 57.336 42.857 0.00 0.00 0.00 4.30
1761 3388 3.319755 GTTCGGAATTACTTGTCACGGA 58.680 45.455 0.00 0.00 0.00 4.69
1762 3389 2.091588 CGTTCGGAATTACTTGTCACGG 59.908 50.000 0.00 0.00 0.00 4.94
1763 3390 2.091588 CCGTTCGGAATTACTTGTCACG 59.908 50.000 5.19 0.00 0.00 4.35
1764 3391 3.319755 TCCGTTCGGAATTACTTGTCAC 58.680 45.455 11.66 0.00 0.00 3.67
1765 3392 3.581755 CTCCGTTCGGAATTACTTGTCA 58.418 45.455 14.79 0.00 33.41 3.58
1766 3393 2.928116 CCTCCGTTCGGAATTACTTGTC 59.072 50.000 14.79 0.00 33.41 3.18
1767 3394 2.354403 CCCTCCGTTCGGAATTACTTGT 60.354 50.000 14.79 0.00 33.41 3.16
1768 3395 2.093869 TCCCTCCGTTCGGAATTACTTG 60.094 50.000 14.79 1.97 33.41 3.16
1769 3396 2.167900 CTCCCTCCGTTCGGAATTACTT 59.832 50.000 14.79 0.00 33.41 2.24
1770 3397 1.755380 CTCCCTCCGTTCGGAATTACT 59.245 52.381 14.79 0.00 33.41 2.24
1771 3398 1.479730 ACTCCCTCCGTTCGGAATTAC 59.520 52.381 14.79 0.00 33.41 1.89
1772 3399 1.856629 ACTCCCTCCGTTCGGAATTA 58.143 50.000 14.79 2.82 33.41 1.40
1773 3400 1.856629 TACTCCCTCCGTTCGGAATT 58.143 50.000 14.79 0.00 33.41 2.17
1774 3401 1.479730 GTTACTCCCTCCGTTCGGAAT 59.520 52.381 14.79 2.09 33.41 3.01
1775 3402 0.890683 GTTACTCCCTCCGTTCGGAA 59.109 55.000 14.79 0.04 33.41 4.30
1776 3403 0.038744 AGTTACTCCCTCCGTTCGGA 59.961 55.000 13.34 13.34 0.00 4.55
1777 3404 0.172803 CAGTTACTCCCTCCGTTCGG 59.827 60.000 4.74 4.74 0.00 4.30
1778 3405 0.458025 GCAGTTACTCCCTCCGTTCG 60.458 60.000 0.00 0.00 0.00 3.95
1779 3406 0.896226 AGCAGTTACTCCCTCCGTTC 59.104 55.000 0.00 0.00 0.00 3.95
1780 3407 1.349067 AAGCAGTTACTCCCTCCGTT 58.651 50.000 0.00 0.00 0.00 4.44
1781 3408 1.349067 AAAGCAGTTACTCCCTCCGT 58.651 50.000 0.00 0.00 0.00 4.69
1782 3409 2.076863 CAAAAGCAGTTACTCCCTCCG 58.923 52.381 0.00 0.00 0.00 4.63
1783 3410 2.437413 CCAAAAGCAGTTACTCCCTCC 58.563 52.381 0.00 0.00 0.00 4.30
1784 3411 1.813178 GCCAAAAGCAGTTACTCCCTC 59.187 52.381 0.00 0.00 42.97 4.30
1785 3412 1.911057 GCCAAAAGCAGTTACTCCCT 58.089 50.000 0.00 0.00 42.97 4.20
1828 3455 3.729966 AGAGATCAGATGCGTACGACTA 58.270 45.455 21.65 4.46 0.00 2.59
1841 3468 7.986320 AGAATGGTTGACAGAATTAGAGATCAG 59.014 37.037 0.00 0.00 0.00 2.90
1842 3469 7.767659 CAGAATGGTTGACAGAATTAGAGATCA 59.232 37.037 0.00 0.00 0.00 2.92
1843 3470 7.254727 GCAGAATGGTTGACAGAATTAGAGATC 60.255 40.741 0.00 0.00 35.86 2.75
1844 3471 6.541641 GCAGAATGGTTGACAGAATTAGAGAT 59.458 38.462 0.00 0.00 35.86 2.75
1845 3472 5.877012 GCAGAATGGTTGACAGAATTAGAGA 59.123 40.000 0.00 0.00 35.86 3.10
1855 3482 1.887854 CATGTGGCAGAATGGTTGACA 59.112 47.619 0.00 0.00 35.86 3.58
1859 3486 0.409092 TCCCATGTGGCAGAATGGTT 59.591 50.000 21.64 0.00 41.59 3.67
1905 3549 7.564538 CATACGTATGACAAGTAATTCGGAACG 60.565 40.741 27.88 0.00 44.96 3.95
1906 3550 7.306399 CCATACGTATGACAAGTAATTCGGAAC 60.306 40.741 32.19 0.00 35.75 3.62
1907 3551 6.698329 CCATACGTATGACAAGTAATTCGGAA 59.302 38.462 32.19 0.00 35.75 4.30
1908 3552 6.039605 TCCATACGTATGACAAGTAATTCGGA 59.960 38.462 32.19 15.77 35.75 4.55
1909 3553 6.210796 TCCATACGTATGACAAGTAATTCGG 58.789 40.000 32.19 13.86 35.75 4.30
1910 3554 7.381408 ACATCCATACGTATGACAAGTAATTCG 59.619 37.037 32.19 13.75 35.75 3.34
1911 3555 8.589335 ACATCCATACGTATGACAAGTAATTC 57.411 34.615 32.19 0.00 35.75 2.17
1913 3557 9.856488 GATACATCCATACGTATGACAAGTAAT 57.144 33.333 32.19 17.44 35.75 1.89
1914 3558 9.074576 AGATACATCCATACGTATGACAAGTAA 57.925 33.333 32.19 14.10 35.75 2.24
1915 3559 8.631480 AGATACATCCATACGTATGACAAGTA 57.369 34.615 32.19 25.56 35.75 2.24
1916 3560 7.526142 AGATACATCCATACGTATGACAAGT 57.474 36.000 32.19 24.56 35.75 3.16
1917 3561 8.947115 TCTAGATACATCCATACGTATGACAAG 58.053 37.037 32.19 21.08 35.75 3.16
1918 3562 8.857694 TCTAGATACATCCATACGTATGACAA 57.142 34.615 32.19 19.02 35.75 3.18
1919 3563 8.893727 CATCTAGATACATCCATACGTATGACA 58.106 37.037 32.19 20.13 35.75 3.58
1920 3564 8.894731 ACATCTAGATACATCCATACGTATGAC 58.105 37.037 32.19 15.40 35.75 3.06
1952 3596 9.250624 GTCGCTGAAATAGATGTATCTAAAACT 57.749 33.333 5.75 0.00 42.20 2.66
1953 3597 8.208560 CGTCGCTGAAATAGATGTATCTAAAAC 58.791 37.037 5.75 2.09 42.20 2.43
1954 3598 8.132995 TCGTCGCTGAAATAGATGTATCTAAAA 58.867 33.333 5.75 0.00 42.20 1.52
1955 3599 7.645402 TCGTCGCTGAAATAGATGTATCTAAA 58.355 34.615 5.75 0.00 42.20 1.85
1956 3600 7.041303 ACTCGTCGCTGAAATAGATGTATCTAA 60.041 37.037 5.75 0.00 42.20 2.10
1957 3601 6.427242 ACTCGTCGCTGAAATAGATGTATCTA 59.573 38.462 4.22 4.22 43.00 1.98
1958 3602 5.239744 ACTCGTCGCTGAAATAGATGTATCT 59.760 40.000 0.00 0.00 40.86 1.98
1959 3603 5.453648 ACTCGTCGCTGAAATAGATGTATC 58.546 41.667 0.00 0.00 0.00 2.24
1960 3604 5.440234 ACTCGTCGCTGAAATAGATGTAT 57.560 39.130 0.00 0.00 0.00 2.29
1961 3605 4.895224 ACTCGTCGCTGAAATAGATGTA 57.105 40.909 0.00 0.00 0.00 2.29
1962 3606 3.784701 ACTCGTCGCTGAAATAGATGT 57.215 42.857 0.00 0.00 0.00 3.06
1963 3607 6.755461 AATTACTCGTCGCTGAAATAGATG 57.245 37.500 0.00 0.00 0.00 2.90
1964 3608 6.201044 CCAAATTACTCGTCGCTGAAATAGAT 59.799 38.462 0.00 0.00 0.00 1.98
1965 3609 5.518847 CCAAATTACTCGTCGCTGAAATAGA 59.481 40.000 0.00 0.00 0.00 1.98
1966 3610 5.276868 CCCAAATTACTCGTCGCTGAAATAG 60.277 44.000 0.00 0.00 0.00 1.73
1967 3611 4.569162 CCCAAATTACTCGTCGCTGAAATA 59.431 41.667 0.00 0.00 0.00 1.40
1968 3612 3.374058 CCCAAATTACTCGTCGCTGAAAT 59.626 43.478 0.00 0.00 0.00 2.17
1969 3613 2.739913 CCCAAATTACTCGTCGCTGAAA 59.260 45.455 0.00 0.00 0.00 2.69
1970 3614 2.028839 TCCCAAATTACTCGTCGCTGAA 60.029 45.455 0.00 0.00 0.00 3.02
1971 3615 1.546923 TCCCAAATTACTCGTCGCTGA 59.453 47.619 0.00 0.00 0.00 4.26
1972 3616 1.659098 GTCCCAAATTACTCGTCGCTG 59.341 52.381 0.00 0.00 0.00 5.18
1973 3617 1.274167 TGTCCCAAATTACTCGTCGCT 59.726 47.619 0.00 0.00 0.00 4.93
1974 3618 1.717194 TGTCCCAAATTACTCGTCGC 58.283 50.000 0.00 0.00 0.00 5.19
1975 3619 3.124636 CCTTTGTCCCAAATTACTCGTCG 59.875 47.826 0.00 0.00 0.00 5.12
1976 3620 3.439129 CCCTTTGTCCCAAATTACTCGTC 59.561 47.826 0.00 0.00 0.00 4.20
1977 3621 3.073356 TCCCTTTGTCCCAAATTACTCGT 59.927 43.478 0.00 0.00 0.00 4.18
1978 3622 3.681593 TCCCTTTGTCCCAAATTACTCG 58.318 45.455 0.00 0.00 0.00 4.18
1979 3623 4.663334 ACTCCCTTTGTCCCAAATTACTC 58.337 43.478 0.00 0.00 0.00 2.59
1980 3624 4.741928 ACTCCCTTTGTCCCAAATTACT 57.258 40.909 0.00 0.00 0.00 2.24
1981 3625 4.703575 GGTACTCCCTTTGTCCCAAATTAC 59.296 45.833 0.00 0.00 0.00 1.89
1982 3626 4.566070 CGGTACTCCCTTTGTCCCAAATTA 60.566 45.833 0.00 0.00 0.00 1.40
1983 3627 3.774734 GGTACTCCCTTTGTCCCAAATT 58.225 45.455 0.00 0.00 0.00 1.82
1984 3628 2.290705 CGGTACTCCCTTTGTCCCAAAT 60.291 50.000 0.00 0.00 0.00 2.32
1985 3629 1.072648 CGGTACTCCCTTTGTCCCAAA 59.927 52.381 0.00 0.00 0.00 3.28
1986 3630 0.688487 CGGTACTCCCTTTGTCCCAA 59.312 55.000 0.00 0.00 0.00 4.12
1987 3631 0.472352 ACGGTACTCCCTTTGTCCCA 60.472 55.000 0.00 0.00 0.00 4.37
1988 3632 0.036671 CACGGTACTCCCTTTGTCCC 60.037 60.000 0.00 0.00 0.00 4.46
1989 3633 0.036671 CCACGGTACTCCCTTTGTCC 60.037 60.000 0.00 0.00 0.00 4.02
1990 3634 0.683412 ACCACGGTACTCCCTTTGTC 59.317 55.000 0.00 0.00 0.00 3.18
1991 3635 1.897802 CTACCACGGTACTCCCTTTGT 59.102 52.381 0.00 0.00 0.00 2.83
1992 3636 1.897802 ACTACCACGGTACTCCCTTTG 59.102 52.381 0.00 0.00 0.00 2.77
1993 3637 2.174360 GACTACCACGGTACTCCCTTT 58.826 52.381 0.00 0.00 0.00 3.11
1994 3638 1.618074 GGACTACCACGGTACTCCCTT 60.618 57.143 9.62 0.00 31.61 3.95
1995 3639 0.033699 GGACTACCACGGTACTCCCT 60.034 60.000 9.62 0.00 31.61 4.20
1996 3640 0.323725 TGGACTACCACGGTACTCCC 60.324 60.000 15.40 7.71 41.77 4.30
1997 3641 3.271250 TGGACTACCACGGTACTCC 57.729 57.895 12.59 12.59 41.77 3.85
2076 3757 1.347707 TGAAATCACAGCCGTTCTCCT 59.652 47.619 0.00 0.00 0.00 3.69
2084 3765 5.633830 TCTTCTTCAATGAAATCACAGCC 57.366 39.130 0.00 0.00 0.00 4.85
2103 3784 3.890674 GCCGATGCCGTTCTTCTT 58.109 55.556 0.00 0.00 0.00 2.52
2223 3907 2.749839 TCGGCTGCCCAATTTCGG 60.750 61.111 14.12 0.00 0.00 4.30
2266 3950 0.685660 GGGTGACCGACTTCTTCCTT 59.314 55.000 0.00 0.00 43.64 3.36
2267 3951 2.363297 GGGTGACCGACTTCTTCCT 58.637 57.895 0.00 0.00 43.64 3.36
2279 3963 3.261137 ACCTCTACTTAAGCAAGGGTGAC 59.739 47.826 17.85 0.00 35.97 3.67
2280 3964 3.260884 CACCTCTACTTAAGCAAGGGTGA 59.739 47.826 24.03 7.69 40.26 4.02
2281 3965 3.600388 CACCTCTACTTAAGCAAGGGTG 58.400 50.000 19.83 19.83 35.44 4.61
2282 3966 2.572104 CCACCTCTACTTAAGCAAGGGT 59.428 50.000 17.85 13.93 35.97 4.34
2283 3967 2.572104 ACCACCTCTACTTAAGCAAGGG 59.428 50.000 17.85 9.83 35.97 3.95
2284 3968 3.369576 GGACCACCTCTACTTAAGCAAGG 60.370 52.174 13.96 13.96 35.97 3.61
2285 3969 3.260884 TGGACCACCTCTACTTAAGCAAG 59.739 47.826 1.29 0.54 36.07 4.01
2286 3970 3.007614 GTGGACCACCTCTACTTAAGCAA 59.992 47.826 14.16 0.00 37.04 3.91
2287 3971 2.565834 GTGGACCACCTCTACTTAAGCA 59.434 50.000 14.16 0.00 37.04 3.91
2288 3972 2.832733 AGTGGACCACCTCTACTTAAGC 59.167 50.000 21.32 0.00 37.42 3.09
2289 3973 3.195825 CCAGTGGACCACCTCTACTTAAG 59.804 52.174 21.32 0.00 38.63 1.85
2290 3974 3.170717 CCAGTGGACCACCTCTACTTAA 58.829 50.000 21.32 0.00 38.63 1.85
2291 3975 2.559026 CCCAGTGGACCACCTCTACTTA 60.559 54.545 21.32 0.00 38.63 2.24
2292 3976 1.645710 CCAGTGGACCACCTCTACTT 58.354 55.000 21.32 0.00 38.63 2.24
2293 3977 0.252284 CCCAGTGGACCACCTCTACT 60.252 60.000 21.32 0.00 41.28 2.57
2294 3978 1.265454 CCCCAGTGGACCACCTCTAC 61.265 65.000 21.32 0.00 37.84 2.59
2295 3979 1.080354 CCCCAGTGGACCACCTCTA 59.920 63.158 21.32 0.00 37.84 2.43
2296 3980 2.203998 CCCCAGTGGACCACCTCT 60.204 66.667 21.32 0.00 40.14 3.69
2297 3981 4.035102 GCCCCAGTGGACCACCTC 62.035 72.222 21.32 2.49 34.49 3.85
2304 3988 3.935456 ATACGTGGGCCCCAGTGGA 62.935 63.158 22.27 5.44 32.34 4.02
2305 3989 2.493273 AAATACGTGGGCCCCAGTGG 62.493 60.000 22.27 0.63 32.34 4.00
2306 3990 1.001393 AAATACGTGGGCCCCAGTG 60.001 57.895 22.27 8.86 32.34 3.66
2307 3991 1.001393 CAAATACGTGGGCCCCAGT 60.001 57.895 22.27 21.50 32.34 4.00
2308 3992 1.752694 CCAAATACGTGGGCCCCAG 60.753 63.158 22.27 16.20 32.34 4.45
2309 3993 1.790635 TTCCAAATACGTGGGCCCCA 61.791 55.000 22.27 0.00 39.34 4.96
2310 3994 1.000646 TTCCAAATACGTGGGCCCC 60.001 57.895 22.27 10.05 39.34 5.80
2311 3995 1.035385 CCTTCCAAATACGTGGGCCC 61.035 60.000 17.59 17.59 39.34 5.80
2312 3996 1.663379 GCCTTCCAAATACGTGGGCC 61.663 60.000 0.00 0.00 39.34 5.80
2313 3997 0.679960 AGCCTTCCAAATACGTGGGC 60.680 55.000 0.00 0.00 39.34 5.36
2314 3998 2.702592 TAGCCTTCCAAATACGTGGG 57.297 50.000 0.00 0.00 39.34 4.61
2315 3999 2.800544 CGATAGCCTTCCAAATACGTGG 59.199 50.000 0.00 0.00 40.33 4.94
2316 4000 3.245284 CACGATAGCCTTCCAAATACGTG 59.755 47.826 0.00 0.00 41.28 4.49
2317 4001 3.454375 CACGATAGCCTTCCAAATACGT 58.546 45.455 0.00 0.00 42.67 3.57
2318 4002 2.800544 CCACGATAGCCTTCCAAATACG 59.199 50.000 0.00 0.00 42.67 3.06
2319 4003 3.560068 CACCACGATAGCCTTCCAAATAC 59.440 47.826 0.00 0.00 42.67 1.89
2320 4004 3.433031 CCACCACGATAGCCTTCCAAATA 60.433 47.826 0.00 0.00 42.67 1.40
2321 4005 2.643551 CACCACGATAGCCTTCCAAAT 58.356 47.619 0.00 0.00 42.67 2.32
2322 4006 1.339631 CCACCACGATAGCCTTCCAAA 60.340 52.381 0.00 0.00 42.67 3.28
2323 4007 0.251916 CCACCACGATAGCCTTCCAA 59.748 55.000 0.00 0.00 42.67 3.53
2324 4008 1.904771 CCACCACGATAGCCTTCCA 59.095 57.895 0.00 0.00 42.67 3.53
2325 4009 1.523938 GCCACCACGATAGCCTTCC 60.524 63.158 0.00 0.00 42.67 3.46
2326 4010 0.530870 GAGCCACCACGATAGCCTTC 60.531 60.000 0.00 0.00 42.67 3.46
2327 4011 1.264749 TGAGCCACCACGATAGCCTT 61.265 55.000 0.00 0.00 42.67 4.35
2328 4012 1.264749 TTGAGCCACCACGATAGCCT 61.265 55.000 0.00 0.00 42.67 4.58
2329 4013 0.811616 CTTGAGCCACCACGATAGCC 60.812 60.000 0.00 0.00 42.67 3.93
2330 4014 0.175760 TCTTGAGCCACCACGATAGC 59.824 55.000 0.00 0.00 42.67 2.97
2331 4015 1.478510 AGTCTTGAGCCACCACGATAG 59.521 52.381 0.00 0.00 46.19 2.08
2332 4016 1.204704 CAGTCTTGAGCCACCACGATA 59.795 52.381 0.00 0.00 0.00 2.92
2333 4017 0.036952 CAGTCTTGAGCCACCACGAT 60.037 55.000 0.00 0.00 0.00 3.73
2334 4018 1.367471 CAGTCTTGAGCCACCACGA 59.633 57.895 0.00 0.00 0.00 4.35
2335 4019 1.669115 CCAGTCTTGAGCCACCACG 60.669 63.158 0.00 0.00 0.00 4.94
2336 4020 0.685097 TACCAGTCTTGAGCCACCAC 59.315 55.000 0.00 0.00 0.00 4.16
2337 4021 1.656587 ATACCAGTCTTGAGCCACCA 58.343 50.000 0.00 0.00 0.00 4.17
2338 4022 2.766828 AGTATACCAGTCTTGAGCCACC 59.233 50.000 0.00 0.00 0.00 4.61
2339 4023 3.786635 CAGTATACCAGTCTTGAGCCAC 58.213 50.000 0.00 0.00 0.00 5.01
2340 4024 2.168521 GCAGTATACCAGTCTTGAGCCA 59.831 50.000 0.00 0.00 0.00 4.75
2341 4025 2.168521 TGCAGTATACCAGTCTTGAGCC 59.831 50.000 0.00 0.00 0.00 4.70
2342 4026 3.190874 GTGCAGTATACCAGTCTTGAGC 58.809 50.000 0.00 0.00 0.00 4.26
2343 4027 3.195610 TGGTGCAGTATACCAGTCTTGAG 59.804 47.826 0.00 0.00 43.00 3.02
2344 4028 3.169908 TGGTGCAGTATACCAGTCTTGA 58.830 45.455 0.00 0.00 43.00 3.02
2345 4029 3.610040 TGGTGCAGTATACCAGTCTTG 57.390 47.619 0.00 0.00 43.00 3.02
2351 4035 6.780522 TCAATATAGACTGGTGCAGTATACCA 59.219 38.462 0.00 0.00 45.44 3.25
2352 4036 7.228314 TCAATATAGACTGGTGCAGTATACC 57.772 40.000 0.00 0.00 45.44 2.73
2353 4037 6.809196 GCTCAATATAGACTGGTGCAGTATAC 59.191 42.308 0.00 0.00 45.44 1.47
2354 4038 6.071334 GGCTCAATATAGACTGGTGCAGTATA 60.071 42.308 0.00 0.00 45.44 1.47
2355 4039 5.279708 GGCTCAATATAGACTGGTGCAGTAT 60.280 44.000 0.00 0.00 45.44 2.12
2356 4040 4.039245 GGCTCAATATAGACTGGTGCAGTA 59.961 45.833 0.00 0.00 45.44 2.74
2358 4042 3.181462 TGGCTCAATATAGACTGGTGCAG 60.181 47.826 0.00 0.00 37.52 4.41
2359 4043 2.771372 TGGCTCAATATAGACTGGTGCA 59.229 45.455 0.00 0.00 0.00 4.57
2360 4044 3.475566 TGGCTCAATATAGACTGGTGC 57.524 47.619 0.00 0.00 0.00 5.01
2361 4045 7.840931 TGTATATGGCTCAATATAGACTGGTG 58.159 38.462 0.00 0.00 0.00 4.17
2362 4046 8.615360 ATGTATATGGCTCAATATAGACTGGT 57.385 34.615 0.00 0.00 0.00 4.00
2363 4047 8.699130 TGATGTATATGGCTCAATATAGACTGG 58.301 37.037 0.00 0.00 0.00 4.00
2370 4054 9.102757 GACGAATTGATGTATATGGCTCAATAT 57.897 33.333 0.00 0.00 37.35 1.28
2371 4055 8.093927 TGACGAATTGATGTATATGGCTCAATA 58.906 33.333 0.00 0.00 37.35 1.90
2372 4056 6.936335 TGACGAATTGATGTATATGGCTCAAT 59.064 34.615 0.00 0.00 39.39 2.57
2373 4057 6.287525 TGACGAATTGATGTATATGGCTCAA 58.712 36.000 0.00 0.00 32.63 3.02
2374 4058 5.852827 TGACGAATTGATGTATATGGCTCA 58.147 37.500 0.00 0.00 0.00 4.26
2375 4059 6.090088 GTCTGACGAATTGATGTATATGGCTC 59.910 42.308 0.00 0.00 0.00 4.70
2376 4060 5.928839 GTCTGACGAATTGATGTATATGGCT 59.071 40.000 0.00 0.00 0.00 4.75
2377 4061 5.696270 TGTCTGACGAATTGATGTATATGGC 59.304 40.000 2.98 0.00 0.00 4.40
2378 4062 7.713764 TTGTCTGACGAATTGATGTATATGG 57.286 36.000 2.98 0.00 0.00 2.74
2381 4065 8.611757 CCAAATTGTCTGACGAATTGATGTATA 58.388 33.333 21.89 0.00 0.00 1.47
2382 4066 7.475015 CCAAATTGTCTGACGAATTGATGTAT 58.525 34.615 21.89 4.40 0.00 2.29
2383 4067 6.622679 GCCAAATTGTCTGACGAATTGATGTA 60.623 38.462 21.89 0.00 0.00 2.29
2384 4068 5.702865 CCAAATTGTCTGACGAATTGATGT 58.297 37.500 21.89 5.20 0.00 3.06
2385 4069 4.560035 GCCAAATTGTCTGACGAATTGATG 59.440 41.667 21.89 14.27 0.00 3.07
2386 4070 4.380867 GGCCAAATTGTCTGACGAATTGAT 60.381 41.667 21.89 6.00 0.00 2.57
2387 4071 3.057596 GGCCAAATTGTCTGACGAATTGA 60.058 43.478 21.89 0.00 0.00 2.57
2388 4072 3.244976 GGCCAAATTGTCTGACGAATTG 58.755 45.455 15.83 15.83 0.00 2.32
2389 4073 2.095263 CGGCCAAATTGTCTGACGAATT 60.095 45.455 2.24 7.03 0.00 2.17
2390 4074 1.468520 CGGCCAAATTGTCTGACGAAT 59.531 47.619 2.24 1.25 0.00 3.34
2391 4075 0.871722 CGGCCAAATTGTCTGACGAA 59.128 50.000 2.24 0.00 0.00 3.85
2392 4076 1.573829 GCGGCCAAATTGTCTGACGA 61.574 55.000 2.24 0.00 0.00 4.20
2393 4077 1.154225 GCGGCCAAATTGTCTGACG 60.154 57.895 2.24 0.00 0.00 4.35
2394 4078 0.387239 GTGCGGCCAAATTGTCTGAC 60.387 55.000 2.24 0.00 0.00 3.51
2395 4079 0.821301 TGTGCGGCCAAATTGTCTGA 60.821 50.000 2.24 0.00 0.00 3.27
2396 4080 0.244450 ATGTGCGGCCAAATTGTCTG 59.756 50.000 2.24 0.00 0.00 3.51
2397 4081 1.832883 TATGTGCGGCCAAATTGTCT 58.167 45.000 2.24 0.00 0.00 3.41
2398 4082 2.645730 TTATGTGCGGCCAAATTGTC 57.354 45.000 2.24 0.00 0.00 3.18
2399 4083 2.233431 ACATTATGTGCGGCCAAATTGT 59.767 40.909 2.24 0.00 0.00 2.71
2400 4084 2.891112 ACATTATGTGCGGCCAAATTG 58.109 42.857 2.24 0.00 0.00 2.32
2401 4085 4.261994 GGATACATTATGTGCGGCCAAATT 60.262 41.667 8.26 0.00 0.00 1.82
2402 4086 3.255642 GGATACATTATGTGCGGCCAAAT 59.744 43.478 8.26 0.00 0.00 2.32
2403 4087 2.621055 GGATACATTATGTGCGGCCAAA 59.379 45.455 8.26 0.00 0.00 3.28
2404 4088 2.226330 GGATACATTATGTGCGGCCAA 58.774 47.619 8.26 0.00 0.00 4.52
2405 4089 1.544537 GGGATACATTATGTGCGGCCA 60.545 52.381 8.26 0.00 39.74 5.36
2406 4090 1.165270 GGGATACATTATGTGCGGCC 58.835 55.000 8.26 0.00 39.74 6.13
2407 4091 1.165270 GGGGATACATTATGTGCGGC 58.835 55.000 8.26 0.00 39.74 6.53
2408 4092 1.270625 ACGGGGATACATTATGTGCGG 60.271 52.381 8.26 0.00 39.74 5.69
2409 4093 2.163818 ACGGGGATACATTATGTGCG 57.836 50.000 8.26 0.00 39.74 5.34
2410 4094 2.812011 GGAACGGGGATACATTATGTGC 59.188 50.000 8.26 0.00 39.74 4.57
2411 4095 3.813166 GTGGAACGGGGATACATTATGTG 59.187 47.826 8.26 0.00 39.74 3.21
2412 4096 3.456644 TGTGGAACGGGGATACATTATGT 59.543 43.478 2.58 2.58 42.39 2.29
2413 4097 4.079980 TGTGGAACGGGGATACATTATG 57.920 45.455 0.00 0.00 42.39 1.90
2414 4098 4.410883 TCTTGTGGAACGGGGATACATTAT 59.589 41.667 0.00 0.00 42.39 1.28
2415 4099 3.775866 TCTTGTGGAACGGGGATACATTA 59.224 43.478 0.00 0.00 42.39 1.90
2416 4100 2.574369 TCTTGTGGAACGGGGATACATT 59.426 45.455 0.00 0.00 42.39 2.71
2417 4101 2.093128 GTCTTGTGGAACGGGGATACAT 60.093 50.000 0.00 0.00 42.39 2.29
2418 4102 1.276989 GTCTTGTGGAACGGGGATACA 59.723 52.381 0.00 0.00 42.39 2.29
2419 4103 1.276989 TGTCTTGTGGAACGGGGATAC 59.723 52.381 0.00 0.00 42.39 2.24
2420 4104 1.276989 GTGTCTTGTGGAACGGGGATA 59.723 52.381 0.00 0.00 42.39 2.59
2421 4105 0.036306 GTGTCTTGTGGAACGGGGAT 59.964 55.000 0.00 0.00 42.39 3.85
2422 4106 1.052124 AGTGTCTTGTGGAACGGGGA 61.052 55.000 0.00 0.00 42.39 4.81
2423 4107 0.179029 AAGTGTCTTGTGGAACGGGG 60.179 55.000 0.00 0.00 42.39 5.73
2424 4108 2.536761 TAAGTGTCTTGTGGAACGGG 57.463 50.000 0.00 0.00 42.39 5.28
2425 4109 4.062293 TGATTAAGTGTCTTGTGGAACGG 58.938 43.478 0.00 0.00 42.39 4.44
2426 4110 5.440685 GTTGATTAAGTGTCTTGTGGAACG 58.559 41.667 0.00 0.00 42.39 3.95
2427 4111 5.278315 GGGTTGATTAAGTGTCTTGTGGAAC 60.278 44.000 0.00 0.00 37.35 3.62
2428 4112 4.825085 GGGTTGATTAAGTGTCTTGTGGAA 59.175 41.667 0.00 0.00 0.00 3.53
2429 4113 4.104102 AGGGTTGATTAAGTGTCTTGTGGA 59.896 41.667 0.00 0.00 0.00 4.02
2430 4114 4.216257 CAGGGTTGATTAAGTGTCTTGTGG 59.784 45.833 0.00 0.00 0.00 4.17
2431 4115 5.063204 TCAGGGTTGATTAAGTGTCTTGTG 58.937 41.667 0.00 0.00 0.00 3.33
2432 4116 5.304686 TCAGGGTTGATTAAGTGTCTTGT 57.695 39.130 0.00 0.00 0.00 3.16
2433 4117 6.039270 TGTTTCAGGGTTGATTAAGTGTCTTG 59.961 38.462 0.00 0.00 32.27 3.02
2434 4118 6.039382 GTGTTTCAGGGTTGATTAAGTGTCTT 59.961 38.462 0.00 0.00 32.27 3.01
2435 4119 5.531287 GTGTTTCAGGGTTGATTAAGTGTCT 59.469 40.000 0.00 0.00 32.27 3.41
2436 4120 5.298276 TGTGTTTCAGGGTTGATTAAGTGTC 59.702 40.000 0.00 0.00 32.27 3.67
2437 4121 5.197451 TGTGTTTCAGGGTTGATTAAGTGT 58.803 37.500 0.00 0.00 32.27 3.55
2438 4122 5.766150 TGTGTTTCAGGGTTGATTAAGTG 57.234 39.130 0.00 0.00 32.27 3.16
2439 4123 6.126409 TCTTGTGTTTCAGGGTTGATTAAGT 58.874 36.000 0.00 0.00 32.27 2.24
2440 4124 6.486657 TCTCTTGTGTTTCAGGGTTGATTAAG 59.513 38.462 0.00 0.00 32.27 1.85
2441 4125 6.361433 TCTCTTGTGTTTCAGGGTTGATTAA 58.639 36.000 0.00 0.00 32.27 1.40
2442 4126 5.935945 TCTCTTGTGTTTCAGGGTTGATTA 58.064 37.500 0.00 0.00 32.27 1.75
2443 4127 4.792068 TCTCTTGTGTTTCAGGGTTGATT 58.208 39.130 0.00 0.00 32.27 2.57
2444 4128 4.437682 TCTCTTGTGTTTCAGGGTTGAT 57.562 40.909 0.00 0.00 32.27 2.57
2445 4129 3.924114 TCTCTTGTGTTTCAGGGTTGA 57.076 42.857 0.00 0.00 0.00 3.18
2446 4130 3.066760 GGTTCTCTTGTGTTTCAGGGTTG 59.933 47.826 0.00 0.00 0.00 3.77
2447 4131 3.288092 GGTTCTCTTGTGTTTCAGGGTT 58.712 45.455 0.00 0.00 0.00 4.11
2448 4132 2.422945 GGGTTCTCTTGTGTTTCAGGGT 60.423 50.000 0.00 0.00 0.00 4.34
2449 4133 2.158608 AGGGTTCTCTTGTGTTTCAGGG 60.159 50.000 0.00 0.00 0.00 4.45
2450 4134 3.214696 AGGGTTCTCTTGTGTTTCAGG 57.785 47.619 0.00 0.00 0.00 3.86
2451 4135 4.036852 GGAAAGGGTTCTCTTGTGTTTCAG 59.963 45.833 0.00 0.00 33.92 3.02
2452 4136 3.951680 GGAAAGGGTTCTCTTGTGTTTCA 59.048 43.478 0.00 0.00 33.92 2.69
2453 4137 3.951680 TGGAAAGGGTTCTCTTGTGTTTC 59.048 43.478 0.00 0.00 33.92 2.78
2454 4138 3.954258 CTGGAAAGGGTTCTCTTGTGTTT 59.046 43.478 0.00 0.00 33.92 2.83
2455 4139 3.555966 CTGGAAAGGGTTCTCTTGTGTT 58.444 45.455 0.00 0.00 33.92 3.32
2456 4140 3.214696 CTGGAAAGGGTTCTCTTGTGT 57.785 47.619 0.00 0.00 33.92 3.72


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.