Multiple sequence alignment - TraesCS4D01G210200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G210200 chr4D 100.000 2877 0 0 1 2877 361594347 361597223 0.000000e+00 5313
1 TraesCS4D01G210200 chr4B 92.946 1616 56 22 721 2305 446853115 446854703 0.000000e+00 2300
2 TraesCS4D01G210200 chr4B 97.610 251 4 1 2337 2587 446854698 446854946 2.050000e-116 429
3 TraesCS4D01G210200 chr4B 91.837 245 14 2 2633 2877 446854942 446855180 1.280000e-88 337
4 TraesCS4D01G210200 chr4A 92.862 1597 58 27 721 2272 103391435 103389850 0.000000e+00 2266
5 TraesCS4D01G210200 chr4A 91.182 567 36 9 2316 2877 103389769 103389212 0.000000e+00 758


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G210200 chr4D 361594347 361597223 2876 False 5313 5313 100.000 1 2877 1 chr4D.!!$F1 2876
1 TraesCS4D01G210200 chr4B 446853115 446855180 2065 False 1022 2300 94.131 721 2877 3 chr4B.!!$F1 2156
2 TraesCS4D01G210200 chr4A 103389212 103391435 2223 True 1512 2266 92.022 721 2877 2 chr4A.!!$R1 2156

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
109 110 0.033109 GGAACCAATCAGGGGGAAGG 60.033 60.0 0.0 0.0 43.89 3.46 F
591 592 0.034337 CGGGAGGTGAGACGGAAAAA 59.966 55.0 0.0 0.0 0.00 1.94 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1025 1052 0.107897 TCGCGCTCTTCTCTCTCTCT 60.108 55.0 5.56 0.0 0.0 3.1 R
1945 1987 0.240145 TCGTGTGTAGAGCAGTTCCG 59.760 55.0 0.00 0.0 0.0 4.3 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 0.811281 AACGCCCTAAATCAAGCAGC 59.189 50.000 0.00 0.00 0.00 5.25
20 21 1.353103 CGCCCTAAATCAAGCAGCG 59.647 57.895 0.00 0.00 33.43 5.18
21 22 1.729881 GCCCTAAATCAAGCAGCGG 59.270 57.895 0.00 0.00 0.00 5.52
22 23 1.729881 CCCTAAATCAAGCAGCGGC 59.270 57.895 0.00 0.00 41.61 6.53
23 24 1.728490 CCCTAAATCAAGCAGCGGCC 61.728 60.000 4.82 0.00 42.56 6.13
24 25 1.031571 CCTAAATCAAGCAGCGGCCA 61.032 55.000 4.82 0.00 42.56 5.36
25 26 0.379669 CTAAATCAAGCAGCGGCCAG 59.620 55.000 4.82 0.00 42.56 4.85
36 37 2.416678 CGGCCAGCAACAGCAAAA 59.583 55.556 2.24 0.00 0.00 2.44
37 38 1.950630 CGGCCAGCAACAGCAAAAC 60.951 57.895 2.24 0.00 0.00 2.43
38 39 1.442987 GGCCAGCAACAGCAAAACT 59.557 52.632 0.00 0.00 0.00 2.66
48 49 1.669440 AGCAAAACTGCTGCCATGG 59.331 52.632 7.63 7.63 44.44 3.66
49 50 2.030958 GCAAAACTGCTGCCATGGC 61.031 57.895 30.54 30.54 42.35 4.40
59 60 2.742403 GCCATGGCAGCCAAACAA 59.258 55.556 32.08 0.00 36.95 2.83
60 61 1.071128 GCCATGGCAGCCAAACAAA 59.929 52.632 32.08 0.00 36.95 2.83
61 62 0.534652 GCCATGGCAGCCAAACAAAA 60.535 50.000 32.08 0.00 36.95 2.44
62 63 1.515081 CCATGGCAGCCAAACAAAAG 58.485 50.000 20.84 2.53 36.95 2.27
63 64 0.869730 CATGGCAGCCAAACAAAAGC 59.130 50.000 20.84 0.00 36.95 3.51
64 65 0.760572 ATGGCAGCCAAACAAAAGCT 59.239 45.000 20.84 0.00 36.95 3.74
65 66 1.407936 TGGCAGCCAAACAAAAGCTA 58.592 45.000 13.33 0.00 34.38 3.32
66 67 1.068434 TGGCAGCCAAACAAAAGCTAC 59.932 47.619 13.33 0.00 34.38 3.58
67 68 1.605457 GGCAGCCAAACAAAAGCTACC 60.605 52.381 6.55 0.00 34.38 3.18
68 69 1.068434 GCAGCCAAACAAAAGCTACCA 59.932 47.619 0.00 0.00 34.38 3.25
69 70 2.289010 GCAGCCAAACAAAAGCTACCAT 60.289 45.455 0.00 0.00 34.38 3.55
70 71 3.319755 CAGCCAAACAAAAGCTACCATG 58.680 45.455 0.00 0.00 34.38 3.66
71 72 2.965147 AGCCAAACAAAAGCTACCATGT 59.035 40.909 0.00 0.00 34.38 3.21
72 73 3.005791 AGCCAAACAAAAGCTACCATGTC 59.994 43.478 0.00 0.00 34.38 3.06
73 74 3.243704 GCCAAACAAAAGCTACCATGTCA 60.244 43.478 0.00 0.00 0.00 3.58
74 75 4.549458 CCAAACAAAAGCTACCATGTCAG 58.451 43.478 0.00 0.00 0.00 3.51
75 76 3.923017 AACAAAAGCTACCATGTCAGC 57.077 42.857 7.52 7.52 38.09 4.26
76 77 2.162681 ACAAAAGCTACCATGTCAGCC 58.837 47.619 11.13 0.00 38.61 4.85
77 78 1.131126 CAAAAGCTACCATGTCAGCCG 59.869 52.381 11.13 0.00 38.61 5.52
78 79 0.613260 AAAGCTACCATGTCAGCCGA 59.387 50.000 11.13 0.00 38.61 5.54
79 80 0.108138 AAGCTACCATGTCAGCCGAC 60.108 55.000 11.13 0.00 42.93 4.79
80 81 1.521681 GCTACCATGTCAGCCGACC 60.522 63.158 0.00 0.00 41.85 4.79
81 82 1.144057 CTACCATGTCAGCCGACCC 59.856 63.158 0.00 0.00 41.85 4.46
82 83 2.311688 CTACCATGTCAGCCGACCCC 62.312 65.000 0.00 0.00 41.85 4.95
83 84 4.489771 CCATGTCAGCCGACCCCC 62.490 72.222 0.00 0.00 41.85 5.40
84 85 4.838152 CATGTCAGCCGACCCCCG 62.838 72.222 0.00 0.00 41.85 5.73
108 109 3.596362 GGAACCAATCAGGGGGAAG 57.404 57.895 0.00 0.00 43.89 3.46
109 110 0.033109 GGAACCAATCAGGGGGAAGG 60.033 60.000 0.00 0.00 43.89 3.46
110 111 0.684479 GAACCAATCAGGGGGAAGGC 60.684 60.000 0.00 0.00 43.89 4.35
111 112 2.124151 CCAATCAGGGGGAAGGCG 60.124 66.667 0.00 0.00 0.00 5.52
112 113 2.830370 CAATCAGGGGGAAGGCGC 60.830 66.667 0.00 0.00 0.00 6.53
113 114 4.489771 AATCAGGGGGAAGGCGCG 62.490 66.667 0.00 0.00 0.00 6.86
129 130 2.741985 CGTCATCGCAAGGCCACA 60.742 61.111 5.01 0.00 38.47 4.17
130 131 2.108514 CGTCATCGCAAGGCCACAT 61.109 57.895 5.01 0.00 38.47 3.21
131 132 1.723870 GTCATCGCAAGGCCACATC 59.276 57.895 5.01 0.00 38.47 3.06
132 133 1.815003 TCATCGCAAGGCCACATCG 60.815 57.895 5.01 2.57 38.47 3.84
133 134 2.514592 ATCGCAAGGCCACATCGG 60.515 61.111 5.01 0.00 38.47 4.18
134 135 3.030168 ATCGCAAGGCCACATCGGA 62.030 57.895 5.01 0.00 35.94 4.55
135 136 2.329539 ATCGCAAGGCCACATCGGAT 62.330 55.000 5.01 0.00 35.94 4.18
136 137 1.227527 CGCAAGGCCACATCGGATA 60.228 57.895 5.01 0.00 36.56 2.59
137 138 1.498865 CGCAAGGCCACATCGGATAC 61.499 60.000 5.01 0.00 36.56 2.24
138 139 0.463654 GCAAGGCCACATCGGATACA 60.464 55.000 5.01 0.00 36.56 2.29
139 140 1.815408 GCAAGGCCACATCGGATACAT 60.815 52.381 5.01 0.00 36.56 2.29
140 141 2.146342 CAAGGCCACATCGGATACATC 58.854 52.381 5.01 0.00 36.56 3.06
141 142 1.423584 AGGCCACATCGGATACATCA 58.576 50.000 5.01 0.00 36.56 3.07
142 143 1.345741 AGGCCACATCGGATACATCAG 59.654 52.381 5.01 0.00 36.56 2.90
143 144 1.151668 GCCACATCGGATACATCAGC 58.848 55.000 0.00 0.00 36.56 4.26
144 145 1.800805 CCACATCGGATACATCAGCC 58.199 55.000 0.00 0.00 36.56 4.85
145 146 1.609061 CCACATCGGATACATCAGCCC 60.609 57.143 0.00 0.00 36.56 5.19
146 147 1.070601 CACATCGGATACATCAGCCCA 59.929 52.381 0.00 0.00 0.00 5.36
147 148 1.768275 ACATCGGATACATCAGCCCAA 59.232 47.619 0.00 0.00 0.00 4.12
148 149 2.373169 ACATCGGATACATCAGCCCAAT 59.627 45.455 0.00 0.00 0.00 3.16
149 150 2.839486 TCGGATACATCAGCCCAATC 57.161 50.000 0.00 0.00 0.00 2.67
150 151 1.000843 TCGGATACATCAGCCCAATCG 59.999 52.381 0.00 0.00 0.00 3.34
151 152 1.160137 GGATACATCAGCCCAATCGC 58.840 55.000 0.00 0.00 0.00 4.58
152 153 1.543208 GGATACATCAGCCCAATCGCA 60.543 52.381 0.00 0.00 0.00 5.10
153 154 2.221169 GATACATCAGCCCAATCGCAA 58.779 47.619 0.00 0.00 0.00 4.85
154 155 1.667236 TACATCAGCCCAATCGCAAG 58.333 50.000 0.00 0.00 0.00 4.01
155 156 0.322816 ACATCAGCCCAATCGCAAGT 60.323 50.000 0.00 0.00 39.48 3.16
156 157 1.065491 ACATCAGCCCAATCGCAAGTA 60.065 47.619 0.00 0.00 39.48 2.24
157 158 2.224606 CATCAGCCCAATCGCAAGTAT 58.775 47.619 0.00 0.00 39.48 2.12
158 159 1.667236 TCAGCCCAATCGCAAGTATG 58.333 50.000 0.00 0.00 39.48 2.39
159 160 1.065491 TCAGCCCAATCGCAAGTATGT 60.065 47.619 0.00 0.00 39.48 2.29
160 161 1.064505 CAGCCCAATCGCAAGTATGTG 59.935 52.381 0.00 0.00 38.44 3.21
161 162 0.381801 GCCCAATCGCAAGTATGTGG 59.618 55.000 0.00 0.00 37.65 4.17
162 163 1.024271 CCCAATCGCAAGTATGTGGG 58.976 55.000 0.00 0.00 39.83 4.61
163 164 1.681780 CCCAATCGCAAGTATGTGGGT 60.682 52.381 0.00 0.00 40.76 4.51
164 165 1.670811 CCAATCGCAAGTATGTGGGTC 59.329 52.381 0.00 0.00 37.65 4.46
165 166 1.670811 CAATCGCAAGTATGTGGGTCC 59.329 52.381 0.00 0.00 37.65 4.46
166 167 1.204146 ATCGCAAGTATGTGGGTCCT 58.796 50.000 0.00 0.00 37.65 3.85
167 168 0.981183 TCGCAAGTATGTGGGTCCTT 59.019 50.000 0.00 0.00 37.65 3.36
168 169 2.181125 TCGCAAGTATGTGGGTCCTTA 58.819 47.619 0.00 0.00 37.65 2.69
169 170 2.167693 TCGCAAGTATGTGGGTCCTTAG 59.832 50.000 0.00 0.00 37.65 2.18
170 171 2.167693 CGCAAGTATGTGGGTCCTTAGA 59.832 50.000 0.00 0.00 33.32 2.10
171 172 3.738281 CGCAAGTATGTGGGTCCTTAGAG 60.738 52.174 0.00 0.00 33.32 2.43
172 173 3.798202 CAAGTATGTGGGTCCTTAGAGC 58.202 50.000 0.00 0.00 39.90 4.09
173 174 3.116096 AGTATGTGGGTCCTTAGAGCA 57.884 47.619 0.00 0.00 42.52 4.26
174 175 3.450904 AGTATGTGGGTCCTTAGAGCAA 58.549 45.455 0.00 0.00 42.52 3.91
175 176 2.789409 ATGTGGGTCCTTAGAGCAAC 57.211 50.000 0.00 0.00 43.57 4.17
176 177 0.320374 TGTGGGTCCTTAGAGCAACG 59.680 55.000 0.00 0.00 45.81 4.10
177 178 1.019805 GTGGGTCCTTAGAGCAACGC 61.020 60.000 0.00 0.00 42.52 4.84
178 179 1.192146 TGGGTCCTTAGAGCAACGCT 61.192 55.000 0.00 0.00 42.52 5.07
179 180 0.822164 GGGTCCTTAGAGCAACGCTA 59.178 55.000 0.00 0.00 42.52 4.26
180 181 1.471153 GGGTCCTTAGAGCAACGCTAC 60.471 57.143 0.00 0.00 42.52 3.58
181 182 1.477295 GGTCCTTAGAGCAACGCTACT 59.523 52.381 0.00 0.00 39.88 2.57
182 183 2.094130 GGTCCTTAGAGCAACGCTACTT 60.094 50.000 0.00 0.00 39.88 2.24
183 184 2.924290 GTCCTTAGAGCAACGCTACTTG 59.076 50.000 0.00 0.00 39.88 3.16
184 185 2.823747 TCCTTAGAGCAACGCTACTTGA 59.176 45.455 0.00 0.00 39.88 3.02
185 186 3.257375 TCCTTAGAGCAACGCTACTTGAA 59.743 43.478 0.00 0.00 39.88 2.69
186 187 3.614616 CCTTAGAGCAACGCTACTTGAAG 59.385 47.826 0.00 0.00 39.88 3.02
187 188 1.433534 AGAGCAACGCTACTTGAAGC 58.566 50.000 0.00 0.00 39.88 3.86
193 194 4.573162 GCTACTTGAAGCGGTCGT 57.427 55.556 0.00 0.00 31.76 4.34
194 195 2.360794 GCTACTTGAAGCGGTCGTC 58.639 57.895 0.00 0.00 31.76 4.20
195 196 1.403972 GCTACTTGAAGCGGTCGTCG 61.404 60.000 0.00 0.00 42.76 5.12
196 197 0.167470 CTACTTGAAGCGGTCGTCGA 59.833 55.000 0.00 0.00 42.43 4.20
197 198 0.110056 TACTTGAAGCGGTCGTCGAC 60.110 55.000 17.16 17.16 42.43 4.20
198 199 1.371267 CTTGAAGCGGTCGTCGACA 60.371 57.895 25.64 2.23 42.43 4.35
199 200 1.606350 CTTGAAGCGGTCGTCGACAC 61.606 60.000 25.64 17.00 42.43 3.67
212 213 1.959747 TCGACACGAGAAACGACATC 58.040 50.000 0.00 0.00 45.77 3.06
213 214 0.982673 CGACACGAGAAACGACATCC 59.017 55.000 0.00 0.00 45.77 3.51
214 215 1.664874 CGACACGAGAAACGACATCCA 60.665 52.381 0.00 0.00 45.77 3.41
215 216 2.400399 GACACGAGAAACGACATCCAA 58.600 47.619 0.00 0.00 45.77 3.53
216 217 2.404215 ACACGAGAAACGACATCCAAG 58.596 47.619 0.00 0.00 45.77 3.61
217 218 2.223971 ACACGAGAAACGACATCCAAGT 60.224 45.455 0.00 0.00 45.77 3.16
218 219 2.800544 CACGAGAAACGACATCCAAGTT 59.199 45.455 0.00 0.00 45.77 2.66
219 220 2.800544 ACGAGAAACGACATCCAAGTTG 59.199 45.455 0.00 0.00 45.77 3.16
220 221 2.157668 CGAGAAACGACATCCAAGTTGG 59.842 50.000 16.36 16.36 45.77 3.77
231 232 3.940209 TCCAAGTTGGATCATGCAAAC 57.060 42.857 21.05 0.00 42.67 2.93
232 233 3.229293 TCCAAGTTGGATCATGCAAACA 58.771 40.909 21.05 0.00 42.67 2.83
233 234 3.640498 TCCAAGTTGGATCATGCAAACAA 59.360 39.130 21.05 0.00 42.67 2.83
234 235 3.742369 CCAAGTTGGATCATGCAAACAAC 59.258 43.478 17.60 11.78 40.96 3.32
235 236 4.370049 CAAGTTGGATCATGCAAACAACA 58.630 39.130 18.09 3.28 42.73 3.33
236 237 3.981211 AGTTGGATCATGCAAACAACAC 58.019 40.909 18.09 1.61 42.73 3.32
237 238 3.059166 GTTGGATCATGCAAACAACACC 58.941 45.455 13.72 0.00 40.66 4.16
238 239 1.269174 TGGATCATGCAAACAACACCG 59.731 47.619 0.00 0.00 0.00 4.94
239 240 1.339711 GATCATGCAAACAACACCGC 58.660 50.000 0.00 0.00 0.00 5.68
240 241 0.387112 ATCATGCAAACAACACCGCG 60.387 50.000 0.00 0.00 0.00 6.46
241 242 2.354539 ATGCAAACAACACCGCGC 60.355 55.556 0.00 0.00 0.00 6.86
242 243 4.896028 TGCAAACAACACCGCGCG 62.896 61.111 25.67 25.67 0.00 6.86
253 254 4.038080 CCGCGCGGCTTTCCTTTT 62.038 61.111 38.48 0.00 0.00 2.27
254 255 2.800746 CGCGCGGCTTTCCTTTTG 60.801 61.111 24.84 0.00 0.00 2.44
255 256 3.105782 GCGCGGCTTTCCTTTTGC 61.106 61.111 8.83 0.00 0.00 3.68
256 257 2.644992 CGCGGCTTTCCTTTTGCT 59.355 55.556 0.00 0.00 0.00 3.91
257 258 1.007387 CGCGGCTTTCCTTTTGCTT 60.007 52.632 0.00 0.00 0.00 3.91
258 259 0.597377 CGCGGCTTTCCTTTTGCTTT 60.597 50.000 0.00 0.00 0.00 3.51
259 260 1.581934 GCGGCTTTCCTTTTGCTTTT 58.418 45.000 0.00 0.00 0.00 2.27
260 261 1.939934 GCGGCTTTCCTTTTGCTTTTT 59.060 42.857 0.00 0.00 0.00 1.94
281 282 6.944234 TTTTCACTTTCTTCTTTCCTCCTC 57.056 37.500 0.00 0.00 0.00 3.71
282 283 4.625607 TCACTTTCTTCTTTCCTCCTCC 57.374 45.455 0.00 0.00 0.00 4.30
283 284 3.328050 TCACTTTCTTCTTTCCTCCTCCC 59.672 47.826 0.00 0.00 0.00 4.30
284 285 2.645297 ACTTTCTTCTTTCCTCCTCCCC 59.355 50.000 0.00 0.00 0.00 4.81
285 286 2.433444 TTCTTCTTTCCTCCTCCCCA 57.567 50.000 0.00 0.00 0.00 4.96
286 287 2.433444 TCTTCTTTCCTCCTCCCCAA 57.567 50.000 0.00 0.00 0.00 4.12
287 288 2.269940 TCTTCTTTCCTCCTCCCCAAG 58.730 52.381 0.00 0.00 0.00 3.61
288 289 1.988846 CTTCTTTCCTCCTCCCCAAGT 59.011 52.381 0.00 0.00 0.00 3.16
289 290 2.133858 TCTTTCCTCCTCCCCAAGTT 57.866 50.000 0.00 0.00 0.00 2.66
290 291 1.705186 TCTTTCCTCCTCCCCAAGTTG 59.295 52.381 0.00 0.00 0.00 3.16
291 292 1.425448 CTTTCCTCCTCCCCAAGTTGT 59.575 52.381 1.45 0.00 0.00 3.32
292 293 2.426431 TTCCTCCTCCCCAAGTTGTA 57.574 50.000 1.45 0.00 0.00 2.41
293 294 2.661176 TCCTCCTCCCCAAGTTGTAT 57.339 50.000 1.45 0.00 0.00 2.29
294 295 2.478292 TCCTCCTCCCCAAGTTGTATC 58.522 52.381 1.45 0.00 0.00 2.24
295 296 2.045885 TCCTCCTCCCCAAGTTGTATCT 59.954 50.000 1.45 0.00 0.00 1.98
296 297 2.171448 CCTCCTCCCCAAGTTGTATCTG 59.829 54.545 1.45 0.00 0.00 2.90
297 298 3.107601 CTCCTCCCCAAGTTGTATCTGA 58.892 50.000 1.45 0.00 0.00 3.27
298 299 3.519510 CTCCTCCCCAAGTTGTATCTGAA 59.480 47.826 1.45 0.00 0.00 3.02
299 300 3.519510 TCCTCCCCAAGTTGTATCTGAAG 59.480 47.826 1.45 0.00 0.00 3.02
300 301 3.519510 CCTCCCCAAGTTGTATCTGAAGA 59.480 47.826 1.45 0.00 0.00 2.87
301 302 4.019321 CCTCCCCAAGTTGTATCTGAAGAA 60.019 45.833 1.45 0.00 0.00 2.52
302 303 5.514834 CCTCCCCAAGTTGTATCTGAAGAAA 60.515 44.000 1.45 0.00 0.00 2.52
303 304 5.313712 TCCCCAAGTTGTATCTGAAGAAAC 58.686 41.667 1.45 0.00 0.00 2.78
304 305 4.459337 CCCCAAGTTGTATCTGAAGAAACC 59.541 45.833 1.45 0.00 0.00 3.27
305 306 5.316987 CCCAAGTTGTATCTGAAGAAACCT 58.683 41.667 1.45 0.00 0.00 3.50
306 307 6.472887 CCCAAGTTGTATCTGAAGAAACCTA 58.527 40.000 1.45 0.00 0.00 3.08
307 308 6.371825 CCCAAGTTGTATCTGAAGAAACCTAC 59.628 42.308 1.45 0.00 0.00 3.18
308 309 7.162082 CCAAGTTGTATCTGAAGAAACCTACT 58.838 38.462 1.45 0.00 0.00 2.57
309 310 8.311836 CCAAGTTGTATCTGAAGAAACCTACTA 58.688 37.037 1.45 0.00 0.00 1.82
310 311 9.877178 CAAGTTGTATCTGAAGAAACCTACTAT 57.123 33.333 0.00 0.00 0.00 2.12
312 313 9.877178 AGTTGTATCTGAAGAAACCTACTATTG 57.123 33.333 0.00 0.00 0.00 1.90
313 314 9.654663 GTTGTATCTGAAGAAACCTACTATTGT 57.345 33.333 0.00 0.00 0.00 2.71
314 315 9.871238 TTGTATCTGAAGAAACCTACTATTGTC 57.129 33.333 0.00 0.00 0.00 3.18
315 316 9.256228 TGTATCTGAAGAAACCTACTATTGTCT 57.744 33.333 0.00 0.00 0.00 3.41
316 317 9.522804 GTATCTGAAGAAACCTACTATTGTCTG 57.477 37.037 0.00 0.00 0.00 3.51
317 318 7.540474 TCTGAAGAAACCTACTATTGTCTGT 57.460 36.000 0.00 0.00 0.00 3.41
318 319 7.378966 TCTGAAGAAACCTACTATTGTCTGTG 58.621 38.462 0.00 0.00 0.00 3.66
319 320 7.232737 TCTGAAGAAACCTACTATTGTCTGTGA 59.767 37.037 0.00 0.00 0.00 3.58
320 321 7.907389 TGAAGAAACCTACTATTGTCTGTGAT 58.093 34.615 0.00 0.00 0.00 3.06
321 322 7.819415 TGAAGAAACCTACTATTGTCTGTGATG 59.181 37.037 0.00 0.00 0.00 3.07
322 323 7.246171 AGAAACCTACTATTGTCTGTGATGT 57.754 36.000 0.00 0.00 0.00 3.06
323 324 7.099764 AGAAACCTACTATTGTCTGTGATGTG 58.900 38.462 0.00 0.00 0.00 3.21
324 325 6.360370 AACCTACTATTGTCTGTGATGTGT 57.640 37.500 0.00 0.00 0.00 3.72
325 326 7.476540 AACCTACTATTGTCTGTGATGTGTA 57.523 36.000 0.00 0.00 0.00 2.90
326 327 7.661536 ACCTACTATTGTCTGTGATGTGTAT 57.338 36.000 0.00 0.00 0.00 2.29
327 328 7.717568 ACCTACTATTGTCTGTGATGTGTATC 58.282 38.462 0.00 0.00 0.00 2.24
328 329 7.561722 ACCTACTATTGTCTGTGATGTGTATCT 59.438 37.037 0.00 0.00 34.31 1.98
329 330 7.864882 CCTACTATTGTCTGTGATGTGTATCTG 59.135 40.741 0.00 0.00 34.31 2.90
330 331 7.410120 ACTATTGTCTGTGATGTGTATCTGA 57.590 36.000 0.00 0.00 34.31 3.27
331 332 7.840931 ACTATTGTCTGTGATGTGTATCTGAA 58.159 34.615 0.00 0.00 34.31 3.02
332 333 8.314021 ACTATTGTCTGTGATGTGTATCTGAAA 58.686 33.333 0.00 0.00 34.31 2.69
333 334 7.606858 ATTGTCTGTGATGTGTATCTGAAAG 57.393 36.000 0.00 0.00 34.31 2.62
334 335 6.101650 TGTCTGTGATGTGTATCTGAAAGT 57.898 37.500 0.00 0.00 34.31 2.66
335 336 5.928264 TGTCTGTGATGTGTATCTGAAAGTG 59.072 40.000 0.00 0.00 34.31 3.16
336 337 6.159293 GTCTGTGATGTGTATCTGAAAGTGA 58.841 40.000 0.00 0.00 34.31 3.41
337 338 6.309980 GTCTGTGATGTGTATCTGAAAGTGAG 59.690 42.308 0.00 0.00 34.31 3.51
338 339 6.209391 TCTGTGATGTGTATCTGAAAGTGAGA 59.791 38.462 0.00 0.00 34.31 3.27
339 340 6.939622 TGTGATGTGTATCTGAAAGTGAGAT 58.060 36.000 0.00 0.00 34.31 2.75
340 341 7.389232 TGTGATGTGTATCTGAAAGTGAGATT 58.611 34.615 0.00 0.00 34.31 2.40
341 342 7.332678 TGTGATGTGTATCTGAAAGTGAGATTG 59.667 37.037 0.00 0.00 34.31 2.67
342 343 7.547019 GTGATGTGTATCTGAAAGTGAGATTGA 59.453 37.037 0.00 0.00 34.31 2.57
343 344 7.763071 TGATGTGTATCTGAAAGTGAGATTGAG 59.237 37.037 0.00 0.00 34.31 3.02
344 345 6.997655 TGTGTATCTGAAAGTGAGATTGAGT 58.002 36.000 0.00 0.00 32.32 3.41
345 346 6.870439 TGTGTATCTGAAAGTGAGATTGAGTG 59.130 38.462 0.00 0.00 32.32 3.51
346 347 5.871524 TGTATCTGAAAGTGAGATTGAGTGC 59.128 40.000 0.00 0.00 32.32 4.40
347 348 3.668447 TCTGAAAGTGAGATTGAGTGCC 58.332 45.455 0.00 0.00 33.76 5.01
348 349 3.326006 TCTGAAAGTGAGATTGAGTGCCT 59.674 43.478 0.00 0.00 33.76 4.75
349 350 4.528206 TCTGAAAGTGAGATTGAGTGCCTA 59.472 41.667 0.00 0.00 33.76 3.93
350 351 5.012046 TCTGAAAGTGAGATTGAGTGCCTAA 59.988 40.000 0.00 0.00 33.76 2.69
351 352 4.997395 TGAAAGTGAGATTGAGTGCCTAAC 59.003 41.667 0.00 0.00 0.00 2.34
352 353 4.623932 AAGTGAGATTGAGTGCCTAACA 57.376 40.909 0.00 0.00 0.00 2.41
353 354 4.833478 AGTGAGATTGAGTGCCTAACAT 57.167 40.909 0.00 0.00 0.00 2.71
354 355 4.511527 AGTGAGATTGAGTGCCTAACATG 58.488 43.478 0.00 0.00 0.00 3.21
355 356 3.064545 GTGAGATTGAGTGCCTAACATGC 59.935 47.826 0.00 0.00 0.00 4.06
356 357 2.615912 GAGATTGAGTGCCTAACATGCC 59.384 50.000 0.00 0.00 0.00 4.40
357 358 2.240667 AGATTGAGTGCCTAACATGCCT 59.759 45.455 0.00 0.00 0.00 4.75
358 359 2.584835 TTGAGTGCCTAACATGCCTT 57.415 45.000 0.00 0.00 0.00 4.35
359 360 1.825090 TGAGTGCCTAACATGCCTTG 58.175 50.000 0.00 0.00 0.00 3.61
360 361 1.098050 GAGTGCCTAACATGCCTTGG 58.902 55.000 0.00 0.00 0.00 3.61
361 362 0.323725 AGTGCCTAACATGCCTTGGG 60.324 55.000 0.00 0.00 0.00 4.12
362 363 1.000233 TGCCTAACATGCCTTGGGG 60.000 57.895 0.00 0.00 0.00 4.96
363 364 1.000359 GCCTAACATGCCTTGGGGT 60.000 57.895 0.00 0.00 34.45 4.95
364 365 1.322538 GCCTAACATGCCTTGGGGTG 61.323 60.000 0.00 0.00 34.45 4.61
365 366 0.331278 CCTAACATGCCTTGGGGTGA 59.669 55.000 0.00 0.00 34.45 4.02
366 367 1.683011 CCTAACATGCCTTGGGGTGAG 60.683 57.143 0.00 0.00 34.45 3.51
367 368 0.331278 TAACATGCCTTGGGGTGAGG 59.669 55.000 0.00 0.00 37.35 3.86
368 369 1.729267 AACATGCCTTGGGGTGAGGT 61.729 55.000 0.00 0.00 36.63 3.85
369 370 1.679977 CATGCCTTGGGGTGAGGTG 60.680 63.158 0.00 0.00 36.63 4.00
370 371 2.922704 ATGCCTTGGGGTGAGGTGG 61.923 63.158 0.00 0.00 36.63 4.61
371 372 3.580319 GCCTTGGGGTGAGGTGGT 61.580 66.667 0.00 0.00 36.63 4.16
372 373 2.436109 CCTTGGGGTGAGGTGGTG 59.564 66.667 0.00 0.00 0.00 4.17
373 374 2.436109 CTTGGGGTGAGGTGGTGG 59.564 66.667 0.00 0.00 0.00 4.61
374 375 3.868200 CTTGGGGTGAGGTGGTGGC 62.868 68.421 0.00 0.00 0.00 5.01
397 398 4.129737 CGGCGTCATCCCACGAGT 62.130 66.667 0.00 0.00 42.69 4.18
398 399 2.767445 CGGCGTCATCCCACGAGTA 61.767 63.158 0.00 0.00 42.69 2.59
399 400 1.065928 GGCGTCATCCCACGAGTAG 59.934 63.158 0.00 0.00 42.69 2.57
400 401 1.065928 GCGTCATCCCACGAGTAGG 59.934 63.158 0.00 0.00 42.69 3.18
402 403 1.442148 GTCATCCCACGAGTAGGGC 59.558 63.158 0.00 0.00 46.36 5.19
403 404 2.125326 TCATCCCACGAGTAGGGCG 61.125 63.158 0.00 0.00 46.36 6.13
404 405 3.537874 ATCCCACGAGTAGGGCGC 61.538 66.667 0.00 0.00 46.36 6.53
407 408 4.208686 CCACGAGTAGGGCGCCTC 62.209 72.222 28.56 16.85 34.61 4.70
422 423 3.449227 CTCGACCAGGCCACGCTA 61.449 66.667 5.01 0.00 0.00 4.26
423 424 2.758327 TCGACCAGGCCACGCTAT 60.758 61.111 5.01 0.00 0.00 2.97
424 425 2.279517 CGACCAGGCCACGCTATC 60.280 66.667 5.01 0.00 0.00 2.08
425 426 2.900273 GACCAGGCCACGCTATCA 59.100 61.111 5.01 0.00 0.00 2.15
426 427 1.227380 GACCAGGCCACGCTATCAG 60.227 63.158 5.01 0.00 0.00 2.90
427 428 2.590007 CCAGGCCACGCTATCAGC 60.590 66.667 5.01 0.00 38.02 4.26
428 429 2.503061 CAGGCCACGCTATCAGCT 59.497 61.111 5.01 0.00 39.60 4.24
429 430 1.886313 CAGGCCACGCTATCAGCTG 60.886 63.158 7.63 7.63 39.60 4.24
430 431 2.590007 GGCCACGCTATCAGCTGG 60.590 66.667 15.13 0.00 39.60 4.85
436 437 2.590007 GCTATCAGCTGGCGGTGG 60.590 66.667 15.13 1.30 38.45 4.61
437 438 2.590007 CTATCAGCTGGCGGTGGC 60.590 66.667 15.13 0.00 39.09 5.01
438 439 3.390183 CTATCAGCTGGCGGTGGCA 62.390 63.158 15.13 0.00 42.47 4.92
472 473 2.434359 GGCAACGGACGAGGAAGG 60.434 66.667 0.00 0.00 0.00 3.46
473 474 2.434359 GCAACGGACGAGGAAGGG 60.434 66.667 0.00 0.00 0.00 3.95
474 475 2.264794 CAACGGACGAGGAAGGGG 59.735 66.667 0.00 0.00 0.00 4.79
475 476 2.118951 AACGGACGAGGAAGGGGA 59.881 61.111 0.00 0.00 0.00 4.81
476 477 1.305887 AACGGACGAGGAAGGGGAT 60.306 57.895 0.00 0.00 0.00 3.85
477 478 1.614241 AACGGACGAGGAAGGGGATG 61.614 60.000 0.00 0.00 0.00 3.51
478 479 2.797278 CGGACGAGGAAGGGGATGG 61.797 68.421 0.00 0.00 0.00 3.51
479 480 2.444256 GGACGAGGAAGGGGATGGG 61.444 68.421 0.00 0.00 0.00 4.00
480 481 3.090532 ACGAGGAAGGGGATGGGC 61.091 66.667 0.00 0.00 0.00 5.36
481 482 4.241555 CGAGGAAGGGGATGGGCG 62.242 72.222 0.00 0.00 0.00 6.13
482 483 3.878667 GAGGAAGGGGATGGGCGG 61.879 72.222 0.00 0.00 0.00 6.13
491 492 4.918201 GATGGGCGGCGGAGGAAG 62.918 72.222 9.78 0.00 0.00 3.46
520 521 3.427670 AAAAAGGGTGTGCGGTCG 58.572 55.556 0.00 0.00 0.00 4.79
521 522 2.841160 AAAAAGGGTGTGCGGTCGC 61.841 57.895 8.54 8.54 42.35 5.19
531 532 3.499737 GCGGTCGCAGGGTTCATG 61.500 66.667 10.67 0.00 41.49 3.07
532 533 2.047274 CGGTCGCAGGGTTCATGT 60.047 61.111 0.00 0.00 0.00 3.21
533 534 2.390599 CGGTCGCAGGGTTCATGTG 61.391 63.158 0.00 0.00 0.00 3.21
534 535 2.040544 GGTCGCAGGGTTCATGTGG 61.041 63.158 0.00 0.00 0.00 4.17
535 536 1.003839 GTCGCAGGGTTCATGTGGA 60.004 57.895 0.00 0.00 0.00 4.02
536 537 0.392998 GTCGCAGGGTTCATGTGGAT 60.393 55.000 0.00 0.00 0.00 3.41
537 538 0.327924 TCGCAGGGTTCATGTGGATT 59.672 50.000 0.00 0.00 0.00 3.01
538 539 1.176527 CGCAGGGTTCATGTGGATTT 58.823 50.000 0.00 0.00 0.00 2.17
539 540 1.545582 CGCAGGGTTCATGTGGATTTT 59.454 47.619 0.00 0.00 0.00 1.82
540 541 2.671914 CGCAGGGTTCATGTGGATTTTG 60.672 50.000 0.00 0.00 0.00 2.44
541 542 2.354003 GCAGGGTTCATGTGGATTTTGG 60.354 50.000 0.00 0.00 0.00 3.28
542 543 2.899256 CAGGGTTCATGTGGATTTTGGT 59.101 45.455 0.00 0.00 0.00 3.67
543 544 2.899256 AGGGTTCATGTGGATTTTGGTG 59.101 45.455 0.00 0.00 0.00 4.17
544 545 2.028203 GGGTTCATGTGGATTTTGGTGG 60.028 50.000 0.00 0.00 0.00 4.61
545 546 2.028203 GGTTCATGTGGATTTTGGTGGG 60.028 50.000 0.00 0.00 0.00 4.61
546 547 2.632512 GTTCATGTGGATTTTGGTGGGT 59.367 45.455 0.00 0.00 0.00 4.51
547 548 2.246469 TCATGTGGATTTTGGTGGGTG 58.754 47.619 0.00 0.00 0.00 4.61
548 549 2.158400 TCATGTGGATTTTGGTGGGTGA 60.158 45.455 0.00 0.00 0.00 4.02
549 550 2.461300 TGTGGATTTTGGTGGGTGAA 57.539 45.000 0.00 0.00 0.00 3.18
550 551 2.752030 TGTGGATTTTGGTGGGTGAAA 58.248 42.857 0.00 0.00 0.00 2.69
551 552 3.107601 TGTGGATTTTGGTGGGTGAAAA 58.892 40.909 0.00 0.00 0.00 2.29
552 553 3.519510 TGTGGATTTTGGTGGGTGAAAAA 59.480 39.130 0.00 0.00 0.00 1.94
577 578 4.410400 GTGAAGGGGTGGCGGGAG 62.410 72.222 0.00 0.00 0.00 4.30
584 585 4.083862 GGTGGCGGGAGGTGAGAC 62.084 72.222 0.00 0.00 0.00 3.36
585 586 4.436998 GTGGCGGGAGGTGAGACG 62.437 72.222 0.00 0.00 0.00 4.18
588 589 3.379445 GCGGGAGGTGAGACGGAA 61.379 66.667 0.00 0.00 0.00 4.30
589 590 2.939261 GCGGGAGGTGAGACGGAAA 61.939 63.158 0.00 0.00 0.00 3.13
590 591 1.669440 CGGGAGGTGAGACGGAAAA 59.331 57.895 0.00 0.00 0.00 2.29
591 592 0.034337 CGGGAGGTGAGACGGAAAAA 59.966 55.000 0.00 0.00 0.00 1.94
623 624 6.770746 AAAAATTGATGGTGAGAGATGAGG 57.229 37.500 0.00 0.00 0.00 3.86
624 625 4.434545 AATTGATGGTGAGAGATGAGGG 57.565 45.455 0.00 0.00 0.00 4.30
625 626 2.854736 TGATGGTGAGAGATGAGGGA 57.145 50.000 0.00 0.00 0.00 4.20
626 627 3.120468 TGATGGTGAGAGATGAGGGAA 57.880 47.619 0.00 0.00 0.00 3.97
627 628 3.453868 TGATGGTGAGAGATGAGGGAAA 58.546 45.455 0.00 0.00 0.00 3.13
628 629 3.845992 TGATGGTGAGAGATGAGGGAAAA 59.154 43.478 0.00 0.00 0.00 2.29
629 630 4.289410 TGATGGTGAGAGATGAGGGAAAAA 59.711 41.667 0.00 0.00 0.00 1.94
651 652 6.822073 AAACAGACAAAATAGCGAAAAACC 57.178 33.333 0.00 0.00 0.00 3.27
652 653 4.866921 ACAGACAAAATAGCGAAAAACCC 58.133 39.130 0.00 0.00 0.00 4.11
653 654 3.911964 CAGACAAAATAGCGAAAAACCCG 59.088 43.478 0.00 0.00 0.00 5.28
654 655 3.566742 AGACAAAATAGCGAAAAACCCGT 59.433 39.130 0.00 0.00 0.00 5.28
655 656 3.634283 ACAAAATAGCGAAAAACCCGTG 58.366 40.909 0.00 0.00 0.00 4.94
656 657 2.983803 CAAAATAGCGAAAAACCCGTGG 59.016 45.455 0.00 0.00 0.00 4.94
657 658 2.188062 AATAGCGAAAAACCCGTGGA 57.812 45.000 0.00 0.00 0.00 4.02
658 659 2.188062 ATAGCGAAAAACCCGTGGAA 57.812 45.000 0.00 0.00 0.00 3.53
659 660 1.228533 TAGCGAAAAACCCGTGGAAC 58.771 50.000 0.00 0.00 0.00 3.62
677 678 2.955477 ACGAAGTTACCGAATCCCTC 57.045 50.000 0.00 0.00 37.78 4.30
678 679 2.454538 ACGAAGTTACCGAATCCCTCT 58.545 47.619 0.00 0.00 37.78 3.69
679 680 2.830321 ACGAAGTTACCGAATCCCTCTT 59.170 45.455 0.00 0.00 37.78 2.85
680 681 3.260128 ACGAAGTTACCGAATCCCTCTTT 59.740 43.478 0.00 0.00 37.78 2.52
681 682 4.463891 ACGAAGTTACCGAATCCCTCTTTA 59.536 41.667 0.00 0.00 37.78 1.85
682 683 5.041940 CGAAGTTACCGAATCCCTCTTTAG 58.958 45.833 0.00 0.00 0.00 1.85
683 684 5.163581 CGAAGTTACCGAATCCCTCTTTAGA 60.164 44.000 0.00 0.00 0.00 2.10
684 685 6.616237 AAGTTACCGAATCCCTCTTTAGAA 57.384 37.500 0.00 0.00 0.00 2.10
685 686 6.223351 AGTTACCGAATCCCTCTTTAGAAG 57.777 41.667 0.00 0.00 0.00 2.85
686 687 5.720520 AGTTACCGAATCCCTCTTTAGAAGT 59.279 40.000 0.00 0.00 0.00 3.01
687 688 4.473477 ACCGAATCCCTCTTTAGAAGTG 57.527 45.455 0.00 0.00 0.00 3.16
688 689 3.197983 ACCGAATCCCTCTTTAGAAGTGG 59.802 47.826 2.58 2.58 40.89 4.00
689 690 3.451178 CCGAATCCCTCTTTAGAAGTGGA 59.549 47.826 9.67 7.10 43.24 4.02
690 691 4.442192 CCGAATCCCTCTTTAGAAGTGGAG 60.442 50.000 9.67 2.17 43.24 3.86
691 692 4.402793 CGAATCCCTCTTTAGAAGTGGAGA 59.597 45.833 9.67 6.45 43.24 3.71
692 693 5.069781 CGAATCCCTCTTTAGAAGTGGAGAT 59.930 44.000 9.67 8.01 43.24 2.75
693 694 6.265649 CGAATCCCTCTTTAGAAGTGGAGATA 59.734 42.308 9.67 0.00 43.24 1.98
694 695 7.039363 CGAATCCCTCTTTAGAAGTGGAGATAT 60.039 40.741 9.67 0.00 43.24 1.63
695 696 8.574309 AATCCCTCTTTAGAAGTGGAGATATT 57.426 34.615 9.67 3.18 43.24 1.28
696 697 7.996758 TCCCTCTTTAGAAGTGGAGATATTT 57.003 36.000 9.67 0.00 43.24 1.40
697 698 8.024145 TCCCTCTTTAGAAGTGGAGATATTTC 57.976 38.462 9.67 0.00 43.24 2.17
698 699 7.846823 TCCCTCTTTAGAAGTGGAGATATTTCT 59.153 37.037 9.67 0.00 43.24 2.52
699 700 9.148879 CCCTCTTTAGAAGTGGAGATATTTCTA 57.851 37.037 9.67 0.00 43.24 2.10
700 701 9.974980 CCTCTTTAGAAGTGGAGATATTTCTAC 57.025 37.037 1.90 1.90 43.24 2.59
711 712 7.613585 TGGAGATATTTCTACACCGTAAAACA 58.386 34.615 0.00 0.00 37.93 2.83
712 713 8.095792 TGGAGATATTTCTACACCGTAAAACAA 58.904 33.333 0.00 0.00 37.93 2.83
713 714 9.106070 GGAGATATTTCTACACCGTAAAACAAT 57.894 33.333 0.00 0.00 32.50 2.71
715 716 9.661563 AGATATTTCTACACCGTAAAACAATCA 57.338 29.630 0.00 0.00 0.00 2.57
716 717 9.698617 GATATTTCTACACCGTAAAACAATCAC 57.301 33.333 0.00 0.00 0.00 3.06
717 718 7.739498 ATTTCTACACCGTAAAACAATCACT 57.261 32.000 0.00 0.00 0.00 3.41
718 719 8.836268 ATTTCTACACCGTAAAACAATCACTA 57.164 30.769 0.00 0.00 0.00 2.74
719 720 7.642071 TTCTACACCGTAAAACAATCACTAC 57.358 36.000 0.00 0.00 0.00 2.73
773 775 1.180456 TCCGACGGCTGAAACACCTA 61.180 55.000 9.66 0.00 0.00 3.08
824 828 3.931247 ACCCGTTGCACCGCAGTA 61.931 61.111 0.00 0.00 40.61 2.74
825 829 3.419759 CCCGTTGCACCGCAGTAC 61.420 66.667 0.00 0.00 40.61 2.73
826 830 3.419759 CCGTTGCACCGCAGTACC 61.420 66.667 0.00 0.00 40.61 3.34
827 831 2.357034 CGTTGCACCGCAGTACCT 60.357 61.111 0.00 0.00 40.61 3.08
828 832 2.380410 CGTTGCACCGCAGTACCTC 61.380 63.158 0.00 0.00 40.61 3.85
829 833 1.301401 GTTGCACCGCAGTACCTCA 60.301 57.895 0.00 0.00 40.61 3.86
881 891 2.230508 GCGGTTAAAAGGAAGGAAAGGG 59.769 50.000 0.00 0.00 0.00 3.95
892 902 1.073098 AGGAAAGGGACCACCGAAAT 58.927 50.000 0.00 0.00 46.96 2.17
1022 1049 2.945008 ACGAGATTGCAGAGAGAGAGAG 59.055 50.000 0.00 0.00 0.00 3.20
1023 1050 3.205338 CGAGATTGCAGAGAGAGAGAGA 58.795 50.000 0.00 0.00 0.00 3.10
1024 1051 3.249320 CGAGATTGCAGAGAGAGAGAGAG 59.751 52.174 0.00 0.00 0.00 3.20
1025 1052 4.454678 GAGATTGCAGAGAGAGAGAGAGA 58.545 47.826 0.00 0.00 0.00 3.10
1026 1053 4.458397 AGATTGCAGAGAGAGAGAGAGAG 58.542 47.826 0.00 0.00 0.00 3.20
1027 1054 3.998913 TTGCAGAGAGAGAGAGAGAGA 57.001 47.619 0.00 0.00 0.00 3.10
1028 1055 3.548745 TGCAGAGAGAGAGAGAGAGAG 57.451 52.381 0.00 0.00 0.00 3.20
1029 1056 3.106827 TGCAGAGAGAGAGAGAGAGAGA 58.893 50.000 0.00 0.00 0.00 3.10
1030 1057 3.133542 TGCAGAGAGAGAGAGAGAGAGAG 59.866 52.174 0.00 0.00 0.00 3.20
1031 1058 3.386078 GCAGAGAGAGAGAGAGAGAGAGA 59.614 52.174 0.00 0.00 0.00 3.10
1032 1059 4.501229 GCAGAGAGAGAGAGAGAGAGAGAG 60.501 54.167 0.00 0.00 0.00 3.20
1645 1678 1.208293 GTGAGGATCCAGGACCACTTC 59.792 57.143 15.82 0.00 0.00 3.01
1774 1815 1.507174 CCCTCCTCGTGAAGTCGTC 59.493 63.158 0.00 0.00 0.00 4.20
1836 1877 4.381185 GGTCATGTATAGACGTGGTTGTGA 60.381 45.833 9.72 0.00 42.07 3.58
1875 1916 6.816640 TGGACTAAATTAACTGGTCATTCTCG 59.183 38.462 5.58 0.00 0.00 4.04
1926 1968 1.752084 GCAGAATCCCAATGTCCCTCC 60.752 57.143 0.00 0.00 0.00 4.30
1945 1987 4.093556 CCTCCTTGTAAGCTTTCGATGAAC 59.906 45.833 3.20 0.00 0.00 3.18
1946 1988 3.678072 TCCTTGTAAGCTTTCGATGAACG 59.322 43.478 3.20 0.00 44.09 3.95
1948 1990 3.306917 TGTAAGCTTTCGATGAACGGA 57.693 42.857 3.20 0.00 42.82 4.69
1949 1991 3.655486 TGTAAGCTTTCGATGAACGGAA 58.345 40.909 3.20 0.00 42.82 4.30
1950 1992 3.430895 TGTAAGCTTTCGATGAACGGAAC 59.569 43.478 3.20 0.00 42.82 3.62
1951 1993 2.457366 AGCTTTCGATGAACGGAACT 57.543 45.000 0.00 0.00 42.82 3.01
1952 1994 2.069273 AGCTTTCGATGAACGGAACTG 58.931 47.619 0.00 0.00 42.82 3.16
1953 1995 1.464189 GCTTTCGATGAACGGAACTGC 60.464 52.381 0.00 0.00 42.82 4.40
1954 1996 2.069273 CTTTCGATGAACGGAACTGCT 58.931 47.619 0.00 0.00 42.82 4.24
1956 1998 0.888619 TCGATGAACGGAACTGCTCT 59.111 50.000 0.00 0.00 42.82 4.09
1957 1999 2.089201 TCGATGAACGGAACTGCTCTA 58.911 47.619 0.00 0.00 42.82 2.43
1958 2000 2.159421 TCGATGAACGGAACTGCTCTAC 60.159 50.000 0.00 0.00 42.82 2.59
1960 2002 2.433868 TGAACGGAACTGCTCTACAC 57.566 50.000 0.00 0.00 0.00 2.90
1961 2003 1.684450 TGAACGGAACTGCTCTACACA 59.316 47.619 0.00 0.00 0.00 3.72
1962 2004 2.059541 GAACGGAACTGCTCTACACAC 58.940 52.381 0.00 0.00 0.00 3.82
1963 2005 0.039437 ACGGAACTGCTCTACACACG 60.039 55.000 0.00 0.00 0.00 4.49
1964 2006 0.240145 CGGAACTGCTCTACACACGA 59.760 55.000 0.00 0.00 0.00 4.35
1965 2007 1.699343 GGAACTGCTCTACACACGAC 58.301 55.000 0.00 0.00 0.00 4.34
1966 2008 1.000607 GGAACTGCTCTACACACGACA 60.001 52.381 0.00 0.00 0.00 4.35
1967 2009 2.545113 GGAACTGCTCTACACACGACAA 60.545 50.000 0.00 0.00 0.00 3.18
1968 2010 2.882927 ACTGCTCTACACACGACAAA 57.117 45.000 0.00 0.00 0.00 2.83
1969 2011 2.470821 ACTGCTCTACACACGACAAAC 58.529 47.619 0.00 0.00 0.00 2.93
1970 2012 2.159156 ACTGCTCTACACACGACAAACA 60.159 45.455 0.00 0.00 0.00 2.83
1971 2013 2.198406 TGCTCTACACACGACAAACAC 58.802 47.619 0.00 0.00 0.00 3.32
1972 2014 2.159156 TGCTCTACACACGACAAACACT 60.159 45.455 0.00 0.00 0.00 3.55
1973 2015 3.067040 TGCTCTACACACGACAAACACTA 59.933 43.478 0.00 0.00 0.00 2.74
1974 2016 4.235360 GCTCTACACACGACAAACACTAT 58.765 43.478 0.00 0.00 0.00 2.12
2010 2075 1.933181 TCGTTGCAGTGTCAGACTTTG 59.067 47.619 1.31 1.54 29.75 2.77
2072 2137 7.040548 TCAGAATTCAAAGTAATCATGCACACA 60.041 33.333 8.44 0.00 0.00 3.72
2074 2139 5.764487 TTCAAAGTAATCATGCACACACA 57.236 34.783 0.00 0.00 0.00 3.72
2188 2253 3.266510 TCACATACCCACAGCAATCTC 57.733 47.619 0.00 0.00 0.00 2.75
2305 2372 1.086067 CGGCTCGACTTGATGCATGT 61.086 55.000 2.46 0.00 0.00 3.21
2324 2391 5.246429 GCATGTACTAGGCTAAGGGAACTAT 59.754 44.000 0.00 0.00 33.84 2.12
2325 2392 6.572703 GCATGTACTAGGCTAAGGGAACTATC 60.573 46.154 0.00 0.00 33.84 2.08
2326 2393 6.022107 TGTACTAGGCTAAGGGAACTATCA 57.978 41.667 0.00 0.00 42.68 2.15
2434 2552 1.030488 TCCTCGCCCTTCTGTACTCG 61.030 60.000 0.00 0.00 0.00 4.18
2479 2597 0.388659 CAGGCGGAGATCTCTTCCTG 59.611 60.000 30.79 30.79 40.05 3.86
2480 2598 0.260230 AGGCGGAGATCTCTTCCTGA 59.740 55.000 25.33 0.00 32.89 3.86
2550 2668 1.081509 GCAATCTTTCGCGGTTGCA 60.082 52.632 20.42 0.00 44.63 4.08
2587 2755 1.292223 CCCGCTTTCGTTCCTGAGA 59.708 57.895 0.00 0.00 0.00 3.27
2588 2756 0.737715 CCCGCTTTCGTTCCTGAGAG 60.738 60.000 0.00 0.00 0.00 3.20
2589 2757 0.243907 CCGCTTTCGTTCCTGAGAGA 59.756 55.000 0.00 0.00 0.00 3.10
2590 2758 1.336887 CCGCTTTCGTTCCTGAGAGAA 60.337 52.381 0.00 0.00 0.00 2.87
2591 2759 1.989165 CGCTTTCGTTCCTGAGAGAAG 59.011 52.381 0.00 0.00 0.00 2.85
2592 2760 2.608261 CGCTTTCGTTCCTGAGAGAAGT 60.608 50.000 0.00 0.00 0.00 3.01
2593 2761 3.394719 GCTTTCGTTCCTGAGAGAAGTT 58.605 45.455 0.00 0.00 0.00 2.66
2594 2762 3.185391 GCTTTCGTTCCTGAGAGAAGTTG 59.815 47.826 0.00 0.00 0.00 3.16
2595 2763 4.621991 CTTTCGTTCCTGAGAGAAGTTGA 58.378 43.478 0.00 0.00 0.00 3.18
2596 2764 4.873746 TTCGTTCCTGAGAGAAGTTGAT 57.126 40.909 0.00 0.00 0.00 2.57
2597 2765 4.873746 TCGTTCCTGAGAGAAGTTGATT 57.126 40.909 0.00 0.00 0.00 2.57
2598 2766 5.977489 TCGTTCCTGAGAGAAGTTGATTA 57.023 39.130 0.00 0.00 0.00 1.75
2599 2767 6.340962 TCGTTCCTGAGAGAAGTTGATTAA 57.659 37.500 0.00 0.00 0.00 1.40
2600 2768 6.390721 TCGTTCCTGAGAGAAGTTGATTAAG 58.609 40.000 0.00 0.00 0.00 1.85
2601 2769 5.578727 CGTTCCTGAGAGAAGTTGATTAAGG 59.421 44.000 0.00 0.00 0.00 2.69
2602 2770 6.572509 CGTTCCTGAGAGAAGTTGATTAAGGA 60.573 42.308 0.00 0.00 0.00 3.36
2603 2771 6.287589 TCCTGAGAGAAGTTGATTAAGGAC 57.712 41.667 0.00 0.00 0.00 3.85
2604 2772 5.780282 TCCTGAGAGAAGTTGATTAAGGACA 59.220 40.000 0.00 0.00 0.00 4.02
2605 2773 6.441924 TCCTGAGAGAAGTTGATTAAGGACAT 59.558 38.462 0.00 0.00 0.00 3.06
2606 2774 6.760770 CCTGAGAGAAGTTGATTAAGGACATC 59.239 42.308 0.00 0.00 0.00 3.06
2607 2775 7.244886 TGAGAGAAGTTGATTAAGGACATCA 57.755 36.000 0.00 0.00 0.00 3.07
2608 2776 7.855375 TGAGAGAAGTTGATTAAGGACATCAT 58.145 34.615 0.00 0.00 30.63 2.45
2609 2777 8.324306 TGAGAGAAGTTGATTAAGGACATCATT 58.676 33.333 0.00 0.00 30.63 2.57
2610 2778 9.823647 GAGAGAAGTTGATTAAGGACATCATTA 57.176 33.333 0.00 0.00 30.63 1.90
2611 2779 9.829507 AGAGAAGTTGATTAAGGACATCATTAG 57.170 33.333 0.00 0.00 30.63 1.73
2612 2780 8.970859 AGAAGTTGATTAAGGACATCATTAGG 57.029 34.615 0.00 0.00 30.63 2.69
2613 2781 7.995488 AGAAGTTGATTAAGGACATCATTAGGG 59.005 37.037 0.00 0.00 30.63 3.53
2614 2782 7.213178 AGTTGATTAAGGACATCATTAGGGT 57.787 36.000 0.00 0.00 30.63 4.34
2615 2783 8.331931 AGTTGATTAAGGACATCATTAGGGTA 57.668 34.615 0.00 0.00 30.63 3.69
2616 2784 8.949421 AGTTGATTAAGGACATCATTAGGGTAT 58.051 33.333 0.00 0.00 30.63 2.73
2617 2785 9.574516 GTTGATTAAGGACATCATTAGGGTATT 57.425 33.333 0.00 0.00 30.63 1.89
2618 2786 9.573166 TTGATTAAGGACATCATTAGGGTATTG 57.427 33.333 0.00 0.00 30.63 1.90
2619 2787 8.723365 TGATTAAGGACATCATTAGGGTATTGT 58.277 33.333 0.00 0.00 0.00 2.71
2620 2788 8.924511 ATTAAGGACATCATTAGGGTATTGTG 57.075 34.615 0.00 0.00 0.00 3.33
2621 2789 4.718961 AGGACATCATTAGGGTATTGTGC 58.281 43.478 0.00 0.00 0.00 4.57
2622 2790 4.165950 AGGACATCATTAGGGTATTGTGCA 59.834 41.667 0.00 0.00 0.00 4.57
2623 2791 4.887071 GGACATCATTAGGGTATTGTGCAA 59.113 41.667 0.00 0.00 0.00 4.08
2624 2792 5.359576 GGACATCATTAGGGTATTGTGCAAA 59.640 40.000 0.00 0.00 0.00 3.68
2625 2793 6.040842 GGACATCATTAGGGTATTGTGCAAAT 59.959 38.462 0.00 0.00 0.00 2.32
2626 2794 7.042797 ACATCATTAGGGTATTGTGCAAATC 57.957 36.000 0.00 0.00 0.00 2.17
2627 2795 6.606796 ACATCATTAGGGTATTGTGCAAATCA 59.393 34.615 0.00 0.00 0.00 2.57
2628 2796 7.123997 ACATCATTAGGGTATTGTGCAAATCAA 59.876 33.333 0.00 0.00 0.00 2.57
2629 2797 7.473735 TCATTAGGGTATTGTGCAAATCAAA 57.526 32.000 0.00 0.00 0.00 2.69
2630 2798 7.901029 TCATTAGGGTATTGTGCAAATCAAAA 58.099 30.769 0.00 0.00 0.00 2.44
2631 2799 8.538701 TCATTAGGGTATTGTGCAAATCAAAAT 58.461 29.630 0.00 0.00 36.59 1.82
2632 2800 8.819974 CATTAGGGTATTGTGCAAATCAAAATC 58.180 33.333 0.00 0.00 34.53 2.17
2633 2801 6.610075 AGGGTATTGTGCAAATCAAAATCT 57.390 33.333 0.00 0.00 34.53 2.40
2634 2802 6.400568 AGGGTATTGTGCAAATCAAAATCTG 58.599 36.000 0.00 0.00 34.53 2.90
2635 2803 5.581874 GGGTATTGTGCAAATCAAAATCTGG 59.418 40.000 0.00 0.00 34.53 3.86
2636 2804 5.581874 GGTATTGTGCAAATCAAAATCTGGG 59.418 40.000 0.00 0.00 34.53 4.45
2644 2812 5.125417 GCAAATCAAAATCTGGGTGTAGCTA 59.875 40.000 0.00 0.00 0.00 3.32
2717 2887 4.513692 TCAAATTACCGAACAACTGGTCTG 59.486 41.667 0.00 0.00 39.70 3.51
2718 2888 1.873698 TTACCGAACAACTGGTCTGC 58.126 50.000 0.00 0.00 39.70 4.26
2719 2889 0.753867 TACCGAACAACTGGTCTGCA 59.246 50.000 0.00 0.00 39.70 4.41
2720 2890 0.814010 ACCGAACAACTGGTCTGCAC 60.814 55.000 0.00 0.00 31.16 4.57
2721 2891 0.813610 CCGAACAACTGGTCTGCACA 60.814 55.000 0.00 0.00 0.00 4.57
2780 2951 9.438228 TCTGGTAAATCACGATACAACAAAATA 57.562 29.630 0.00 0.00 0.00 1.40
2803 2974 1.566703 TGGGGTGAAAAGTCAGGACAA 59.433 47.619 1.84 0.00 33.27 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.811281 GCTGCTTGATTTAGGGCGTT 59.189 50.000 0.00 0.00 0.00 4.84
1 2 1.369091 CGCTGCTTGATTTAGGGCGT 61.369 55.000 0.00 0.00 37.03 5.68
2 3 1.353103 CGCTGCTTGATTTAGGGCG 59.647 57.895 0.00 0.00 35.54 6.13
3 4 1.729881 CCGCTGCTTGATTTAGGGC 59.270 57.895 0.00 0.00 0.00 5.19
4 5 1.728490 GGCCGCTGCTTGATTTAGGG 61.728 60.000 0.00 0.00 37.74 3.53
5 6 1.031571 TGGCCGCTGCTTGATTTAGG 61.032 55.000 0.00 0.00 37.74 2.69
6 7 0.379669 CTGGCCGCTGCTTGATTTAG 59.620 55.000 0.00 0.00 37.74 1.85
7 8 1.656818 GCTGGCCGCTGCTTGATTTA 61.657 55.000 11.61 0.00 37.74 1.40
8 9 2.998279 GCTGGCCGCTGCTTGATTT 61.998 57.895 11.61 0.00 37.74 2.17
9 10 3.446570 GCTGGCCGCTGCTTGATT 61.447 61.111 11.61 0.00 37.74 2.57
10 11 4.728110 TGCTGGCCGCTGCTTGAT 62.728 61.111 18.14 0.00 40.11 2.57
11 12 4.953010 TTGCTGGCCGCTGCTTGA 62.953 61.111 18.14 2.82 40.11 3.02
12 13 4.712425 GTTGCTGGCCGCTGCTTG 62.712 66.667 18.14 0.00 40.11 4.01
18 19 3.788616 TTTTGCTGTTGCTGGCCGC 62.789 57.895 11.92 11.92 40.48 6.53
19 20 1.950630 GTTTTGCTGTTGCTGGCCG 60.951 57.895 0.00 0.00 40.48 6.13
20 21 0.877213 CAGTTTTGCTGTTGCTGGCC 60.877 55.000 0.00 0.00 40.27 5.36
21 22 1.493134 GCAGTTTTGCTGTTGCTGGC 61.493 55.000 0.00 0.00 46.95 4.85
22 23 2.596875 GCAGTTTTGCTGTTGCTGG 58.403 52.632 0.00 0.00 46.95 4.85
32 33 4.272100 GCCATGGCAGCAGTTTTG 57.728 55.556 32.08 0.00 41.49 2.44
42 43 0.534652 TTTTGTTTGGCTGCCATGGC 60.535 50.000 30.54 30.54 42.35 4.40
43 44 1.515081 CTTTTGTTTGGCTGCCATGG 58.485 50.000 24.03 7.63 31.53 3.66
44 45 0.869730 GCTTTTGTTTGGCTGCCATG 59.130 50.000 24.03 7.97 31.53 3.66
45 46 0.760572 AGCTTTTGTTTGGCTGCCAT 59.239 45.000 24.03 0.16 34.82 4.40
46 47 1.068434 GTAGCTTTTGTTTGGCTGCCA 59.932 47.619 19.30 19.30 37.50 4.92
47 48 1.783284 GTAGCTTTTGTTTGGCTGCC 58.217 50.000 12.87 12.87 37.50 4.85
48 49 1.068434 TGGTAGCTTTTGTTTGGCTGC 59.932 47.619 0.00 0.00 37.50 5.25
49 50 3.243839 ACATGGTAGCTTTTGTTTGGCTG 60.244 43.478 0.00 0.00 37.50 4.85
50 51 2.965147 ACATGGTAGCTTTTGTTTGGCT 59.035 40.909 0.00 0.00 39.74 4.75
51 52 3.243704 TGACATGGTAGCTTTTGTTTGGC 60.244 43.478 0.00 0.00 0.00 4.52
52 53 4.549458 CTGACATGGTAGCTTTTGTTTGG 58.451 43.478 0.00 0.00 0.00 3.28
53 54 3.983344 GCTGACATGGTAGCTTTTGTTTG 59.017 43.478 14.13 0.00 36.99 2.93
54 55 3.005791 GGCTGACATGGTAGCTTTTGTTT 59.994 43.478 18.88 0.00 39.80 2.83
55 56 2.558359 GGCTGACATGGTAGCTTTTGTT 59.442 45.455 18.88 0.00 39.80 2.83
56 57 2.162681 GGCTGACATGGTAGCTTTTGT 58.837 47.619 18.88 0.00 39.80 2.83
57 58 1.131126 CGGCTGACATGGTAGCTTTTG 59.869 52.381 18.88 7.08 39.80 2.44
58 59 1.003118 TCGGCTGACATGGTAGCTTTT 59.997 47.619 18.88 0.00 39.80 2.27
59 60 0.613260 TCGGCTGACATGGTAGCTTT 59.387 50.000 18.88 0.00 39.80 3.51
60 61 0.108138 GTCGGCTGACATGGTAGCTT 60.108 55.000 21.02 0.00 44.82 3.74
61 62 1.517832 GTCGGCTGACATGGTAGCT 59.482 57.895 21.02 0.00 44.82 3.32
62 63 4.110493 GTCGGCTGACATGGTAGC 57.890 61.111 21.02 13.29 44.82 3.58
82 83 0.460284 CTGATTGGTTCCCTCGTCGG 60.460 60.000 0.00 0.00 0.00 4.79
83 84 0.460284 CCTGATTGGTTCCCTCGTCG 60.460 60.000 0.00 0.00 0.00 5.12
84 85 0.107654 CCCTGATTGGTTCCCTCGTC 60.108 60.000 0.00 0.00 0.00 4.20
85 86 1.562672 CCCCTGATTGGTTCCCTCGT 61.563 60.000 0.00 0.00 0.00 4.18
86 87 1.224592 CCCCTGATTGGTTCCCTCG 59.775 63.158 0.00 0.00 0.00 4.63
87 88 0.919289 TCCCCCTGATTGGTTCCCTC 60.919 60.000 0.00 0.00 0.00 4.30
88 89 0.479589 TTCCCCCTGATTGGTTCCCT 60.480 55.000 0.00 0.00 0.00 4.20
89 90 0.033109 CTTCCCCCTGATTGGTTCCC 60.033 60.000 0.00 0.00 0.00 3.97
90 91 0.033109 CCTTCCCCCTGATTGGTTCC 60.033 60.000 0.00 0.00 0.00 3.62
91 92 0.684479 GCCTTCCCCCTGATTGGTTC 60.684 60.000 0.00 0.00 0.00 3.62
92 93 1.388133 GCCTTCCCCCTGATTGGTT 59.612 57.895 0.00 0.00 0.00 3.67
93 94 2.983879 CGCCTTCCCCCTGATTGGT 61.984 63.158 0.00 0.00 0.00 3.67
94 95 2.124151 CGCCTTCCCCCTGATTGG 60.124 66.667 0.00 0.00 0.00 3.16
95 96 2.830370 GCGCCTTCCCCCTGATTG 60.830 66.667 0.00 0.00 0.00 2.67
96 97 4.489771 CGCGCCTTCCCCCTGATT 62.490 66.667 0.00 0.00 0.00 2.57
112 113 2.040213 GATGTGGCCTTGCGATGACG 62.040 60.000 3.32 0.00 42.93 4.35
113 114 1.723870 GATGTGGCCTTGCGATGAC 59.276 57.895 3.32 0.00 0.00 3.06
114 115 1.815003 CGATGTGGCCTTGCGATGA 60.815 57.895 3.32 0.00 0.00 2.92
115 116 2.711311 CGATGTGGCCTTGCGATG 59.289 61.111 3.32 0.00 0.00 3.84
116 117 2.329539 ATCCGATGTGGCCTTGCGAT 62.330 55.000 3.32 0.00 37.80 4.58
117 118 1.681486 TATCCGATGTGGCCTTGCGA 61.681 55.000 3.32 0.00 37.80 5.10
118 119 1.227527 TATCCGATGTGGCCTTGCG 60.228 57.895 3.32 2.34 37.80 4.85
119 120 0.463654 TGTATCCGATGTGGCCTTGC 60.464 55.000 3.32 0.00 37.80 4.01
120 121 2.146342 GATGTATCCGATGTGGCCTTG 58.854 52.381 3.32 0.00 37.80 3.61
121 122 1.768275 TGATGTATCCGATGTGGCCTT 59.232 47.619 3.32 0.00 37.80 4.35
122 123 1.345741 CTGATGTATCCGATGTGGCCT 59.654 52.381 3.32 0.00 37.80 5.19
123 124 1.800805 CTGATGTATCCGATGTGGCC 58.199 55.000 0.00 0.00 37.80 5.36
124 125 1.151668 GCTGATGTATCCGATGTGGC 58.848 55.000 0.00 0.00 37.80 5.01
125 126 1.609061 GGGCTGATGTATCCGATGTGG 60.609 57.143 0.00 0.00 40.09 4.17
126 127 1.070601 TGGGCTGATGTATCCGATGTG 59.929 52.381 0.00 0.00 0.00 3.21
127 128 1.423584 TGGGCTGATGTATCCGATGT 58.576 50.000 0.00 0.00 0.00 3.06
128 129 2.549064 TTGGGCTGATGTATCCGATG 57.451 50.000 0.00 0.00 0.00 3.84
129 130 2.354103 CGATTGGGCTGATGTATCCGAT 60.354 50.000 0.00 0.00 0.00 4.18
130 131 1.000843 CGATTGGGCTGATGTATCCGA 59.999 52.381 0.00 0.00 0.00 4.55
131 132 1.432514 CGATTGGGCTGATGTATCCG 58.567 55.000 0.00 0.00 0.00 4.18
132 133 1.160137 GCGATTGGGCTGATGTATCC 58.840 55.000 0.00 0.00 0.00 2.59
133 134 1.882912 TGCGATTGGGCTGATGTATC 58.117 50.000 0.00 0.00 0.00 2.24
134 135 2.224606 CTTGCGATTGGGCTGATGTAT 58.775 47.619 0.00 0.00 0.00 2.29
135 136 1.065491 ACTTGCGATTGGGCTGATGTA 60.065 47.619 0.00 0.00 0.00 2.29
136 137 0.322816 ACTTGCGATTGGGCTGATGT 60.323 50.000 0.00 0.00 0.00 3.06
137 138 1.667236 TACTTGCGATTGGGCTGATG 58.333 50.000 0.00 0.00 0.00 3.07
138 139 2.224606 CATACTTGCGATTGGGCTGAT 58.775 47.619 0.00 0.00 0.00 2.90
139 140 1.065491 ACATACTTGCGATTGGGCTGA 60.065 47.619 0.00 0.00 0.00 4.26
140 141 1.064505 CACATACTTGCGATTGGGCTG 59.935 52.381 0.00 0.00 0.00 4.85
141 142 1.382522 CACATACTTGCGATTGGGCT 58.617 50.000 0.00 0.00 0.00 5.19
142 143 0.381801 CCACATACTTGCGATTGGGC 59.618 55.000 0.00 0.00 0.00 5.36
143 144 1.024271 CCCACATACTTGCGATTGGG 58.976 55.000 0.00 0.00 37.93 4.12
144 145 1.670811 GACCCACATACTTGCGATTGG 59.329 52.381 0.00 0.00 0.00 3.16
145 146 1.670811 GGACCCACATACTTGCGATTG 59.329 52.381 0.00 0.00 0.00 2.67
146 147 1.559682 AGGACCCACATACTTGCGATT 59.440 47.619 0.00 0.00 0.00 3.34
147 148 1.204146 AGGACCCACATACTTGCGAT 58.796 50.000 0.00 0.00 0.00 4.58
148 149 0.981183 AAGGACCCACATACTTGCGA 59.019 50.000 0.00 0.00 0.00 5.10
149 150 2.167693 TCTAAGGACCCACATACTTGCG 59.832 50.000 0.00 0.00 0.00 4.85
150 151 3.798202 CTCTAAGGACCCACATACTTGC 58.202 50.000 0.00 0.00 0.00 4.01
151 152 3.197766 TGCTCTAAGGACCCACATACTTG 59.802 47.826 0.00 0.00 0.00 3.16
152 153 3.450904 TGCTCTAAGGACCCACATACTT 58.549 45.455 0.00 0.00 0.00 2.24
153 154 3.116096 TGCTCTAAGGACCCACATACT 57.884 47.619 0.00 0.00 0.00 2.12
154 155 3.532542 GTTGCTCTAAGGACCCACATAC 58.467 50.000 0.00 0.00 0.00 2.39
155 156 2.167693 CGTTGCTCTAAGGACCCACATA 59.832 50.000 0.00 0.00 0.00 2.29
156 157 1.066143 CGTTGCTCTAAGGACCCACAT 60.066 52.381 0.00 0.00 0.00 3.21
157 158 0.320374 CGTTGCTCTAAGGACCCACA 59.680 55.000 0.00 0.00 0.00 4.17
158 159 1.019805 GCGTTGCTCTAAGGACCCAC 61.020 60.000 0.00 0.00 0.00 4.61
159 160 1.192146 AGCGTTGCTCTAAGGACCCA 61.192 55.000 0.00 0.00 30.62 4.51
160 161 0.822164 TAGCGTTGCTCTAAGGACCC 59.178 55.000 0.00 0.00 40.44 4.46
161 162 1.477295 AGTAGCGTTGCTCTAAGGACC 59.523 52.381 0.00 0.00 40.44 4.46
162 163 2.924290 CAAGTAGCGTTGCTCTAAGGAC 59.076 50.000 0.00 0.00 40.44 3.85
163 164 2.823747 TCAAGTAGCGTTGCTCTAAGGA 59.176 45.455 0.00 0.00 40.44 3.36
164 165 3.232213 TCAAGTAGCGTTGCTCTAAGG 57.768 47.619 0.00 0.00 40.44 2.69
165 166 3.061429 GCTTCAAGTAGCGTTGCTCTAAG 59.939 47.826 0.00 7.09 40.44 2.18
166 167 2.993899 GCTTCAAGTAGCGTTGCTCTAA 59.006 45.455 0.00 0.00 40.44 2.10
167 168 2.607187 GCTTCAAGTAGCGTTGCTCTA 58.393 47.619 0.00 0.00 40.44 2.43
168 169 1.433534 GCTTCAAGTAGCGTTGCTCT 58.566 50.000 0.00 0.00 40.44 4.09
169 170 3.957474 GCTTCAAGTAGCGTTGCTC 57.043 52.632 0.00 0.00 40.44 4.26
176 177 1.403972 CGACGACCGCTTCAAGTAGC 61.404 60.000 0.00 0.00 37.80 3.58
177 178 0.167470 TCGACGACCGCTTCAAGTAG 59.833 55.000 0.00 0.00 38.37 2.57
178 179 0.110056 GTCGACGACCGCTTCAAGTA 60.110 55.000 17.25 0.00 38.37 2.24
179 180 1.371389 GTCGACGACCGCTTCAAGT 60.371 57.895 17.25 0.00 38.37 3.16
180 181 1.371267 TGTCGACGACCGCTTCAAG 60.371 57.895 24.33 0.00 38.37 3.02
181 182 1.659335 GTGTCGACGACCGCTTCAA 60.659 57.895 24.33 1.55 38.37 2.69
182 183 2.050714 GTGTCGACGACCGCTTCA 60.051 61.111 24.33 2.39 38.37 3.02
193 194 1.400629 GGATGTCGTTTCTCGTGTCGA 60.401 52.381 0.00 0.00 40.80 4.20
194 195 0.982673 GGATGTCGTTTCTCGTGTCG 59.017 55.000 0.00 0.00 40.80 4.35
195 196 2.060326 TGGATGTCGTTTCTCGTGTC 57.940 50.000 0.00 0.00 40.80 3.67
196 197 2.223971 ACTTGGATGTCGTTTCTCGTGT 60.224 45.455 0.00 0.00 40.80 4.49
197 198 2.404215 ACTTGGATGTCGTTTCTCGTG 58.596 47.619 0.00 0.00 40.80 4.35
198 199 2.800544 CAACTTGGATGTCGTTTCTCGT 59.199 45.455 0.00 0.00 40.80 4.18
199 200 2.157668 CCAACTTGGATGTCGTTTCTCG 59.842 50.000 0.92 0.00 40.96 4.04
200 201 3.399330 TCCAACTTGGATGTCGTTTCTC 58.601 45.455 6.39 0.00 42.67 2.87
201 202 3.485463 TCCAACTTGGATGTCGTTTCT 57.515 42.857 6.39 0.00 42.67 2.52
212 213 3.663995 TGTTTGCATGATCCAACTTGG 57.336 42.857 0.74 0.74 39.43 3.61
213 214 4.209703 GTGTTGTTTGCATGATCCAACTTG 59.790 41.667 0.00 0.00 37.04 3.16
214 215 4.370917 GTGTTGTTTGCATGATCCAACTT 58.629 39.130 0.00 0.00 37.04 2.66
215 216 3.243839 GGTGTTGTTTGCATGATCCAACT 60.244 43.478 0.00 0.00 37.04 3.16
216 217 3.059166 GGTGTTGTTTGCATGATCCAAC 58.941 45.455 0.00 4.06 36.74 3.77
217 218 2.288091 CGGTGTTGTTTGCATGATCCAA 60.288 45.455 0.00 0.00 0.00 3.53
218 219 1.269174 CGGTGTTGTTTGCATGATCCA 59.731 47.619 0.00 0.00 0.00 3.41
219 220 1.981254 CGGTGTTGTTTGCATGATCC 58.019 50.000 0.00 0.00 0.00 3.36
220 221 1.339711 GCGGTGTTGTTTGCATGATC 58.660 50.000 0.00 0.00 0.00 2.92
221 222 0.387112 CGCGGTGTTGTTTGCATGAT 60.387 50.000 0.00 0.00 0.00 2.45
222 223 1.009108 CGCGGTGTTGTTTGCATGA 60.009 52.632 0.00 0.00 0.00 3.07
223 224 2.647381 GCGCGGTGTTGTTTGCATG 61.647 57.895 8.83 0.00 0.00 4.06
224 225 2.354539 GCGCGGTGTTGTTTGCAT 60.355 55.556 8.83 0.00 0.00 3.96
225 226 4.896028 CGCGCGGTGTTGTTTGCA 62.896 61.111 24.84 0.00 0.00 4.08
236 237 4.038080 AAAAGGAAAGCCGCGCGG 62.038 61.111 43.13 43.13 39.96 6.46
237 238 2.800746 CAAAAGGAAAGCCGCGCG 60.801 61.111 25.67 25.67 39.96 6.86
238 239 3.105782 GCAAAAGGAAAGCCGCGC 61.106 61.111 0.00 0.00 39.96 6.86
239 240 0.597377 AAAGCAAAAGGAAAGCCGCG 60.597 50.000 0.00 0.00 39.96 6.46
240 241 1.581934 AAAAGCAAAAGGAAAGCCGC 58.418 45.000 0.00 0.00 39.96 6.53
257 258 6.321435 GGAGGAGGAAAGAAGAAAGTGAAAAA 59.679 38.462 0.00 0.00 0.00 1.94
258 259 5.828328 GGAGGAGGAAAGAAGAAAGTGAAAA 59.172 40.000 0.00 0.00 0.00 2.29
259 260 5.377478 GGAGGAGGAAAGAAGAAAGTGAAA 58.623 41.667 0.00 0.00 0.00 2.69
260 261 4.202472 GGGAGGAGGAAAGAAGAAAGTGAA 60.202 45.833 0.00 0.00 0.00 3.18
261 262 3.328050 GGGAGGAGGAAAGAAGAAAGTGA 59.672 47.826 0.00 0.00 0.00 3.41
262 263 3.560239 GGGGAGGAGGAAAGAAGAAAGTG 60.560 52.174 0.00 0.00 0.00 3.16
263 264 2.645297 GGGGAGGAGGAAAGAAGAAAGT 59.355 50.000 0.00 0.00 0.00 2.66
264 265 2.644798 TGGGGAGGAGGAAAGAAGAAAG 59.355 50.000 0.00 0.00 0.00 2.62
265 266 2.713595 TGGGGAGGAGGAAAGAAGAAA 58.286 47.619 0.00 0.00 0.00 2.52
266 267 2.433444 TGGGGAGGAGGAAAGAAGAA 57.567 50.000 0.00 0.00 0.00 2.52
267 268 2.269940 CTTGGGGAGGAGGAAAGAAGA 58.730 52.381 0.00 0.00 0.00 2.87
268 269 1.988846 ACTTGGGGAGGAGGAAAGAAG 59.011 52.381 0.00 0.00 0.00 2.85
269 270 2.108250 CAACTTGGGGAGGAGGAAAGAA 59.892 50.000 0.00 0.00 0.00 2.52
270 271 1.705186 CAACTTGGGGAGGAGGAAAGA 59.295 52.381 0.00 0.00 0.00 2.52
271 272 1.425448 ACAACTTGGGGAGGAGGAAAG 59.575 52.381 0.00 0.00 0.00 2.62
272 273 1.529744 ACAACTTGGGGAGGAGGAAA 58.470 50.000 0.00 0.00 0.00 3.13
273 274 2.426431 TACAACTTGGGGAGGAGGAA 57.574 50.000 0.00 0.00 0.00 3.36
274 275 2.045885 AGATACAACTTGGGGAGGAGGA 59.954 50.000 0.00 0.00 0.00 3.71
275 276 2.171448 CAGATACAACTTGGGGAGGAGG 59.829 54.545 0.00 0.00 0.00 4.30
276 277 3.107601 TCAGATACAACTTGGGGAGGAG 58.892 50.000 0.00 0.00 0.00 3.69
277 278 3.199442 TCAGATACAACTTGGGGAGGA 57.801 47.619 0.00 0.00 0.00 3.71
278 279 3.519510 TCTTCAGATACAACTTGGGGAGG 59.480 47.826 0.00 0.00 0.00 4.30
279 280 4.826274 TCTTCAGATACAACTTGGGGAG 57.174 45.455 0.00 0.00 0.00 4.30
280 281 5.313712 GTTTCTTCAGATACAACTTGGGGA 58.686 41.667 0.00 0.00 0.00 4.81
281 282 4.459337 GGTTTCTTCAGATACAACTTGGGG 59.541 45.833 0.66 0.00 0.00 4.96
282 283 5.316987 AGGTTTCTTCAGATACAACTTGGG 58.683 41.667 0.66 0.00 0.00 4.12
283 284 7.162082 AGTAGGTTTCTTCAGATACAACTTGG 58.838 38.462 0.66 0.00 0.00 3.61
284 285 9.877178 ATAGTAGGTTTCTTCAGATACAACTTG 57.123 33.333 8.76 0.00 31.59 3.16
286 287 9.877178 CAATAGTAGGTTTCTTCAGATACAACT 57.123 33.333 8.60 8.60 32.77 3.16
287 288 9.654663 ACAATAGTAGGTTTCTTCAGATACAAC 57.345 33.333 0.66 0.00 0.00 3.32
288 289 9.871238 GACAATAGTAGGTTTCTTCAGATACAA 57.129 33.333 0.66 0.00 0.00 2.41
289 290 9.256228 AGACAATAGTAGGTTTCTTCAGATACA 57.744 33.333 0.66 0.00 0.00 2.29
290 291 9.522804 CAGACAATAGTAGGTTTCTTCAGATAC 57.477 37.037 0.00 0.00 0.00 2.24
291 292 9.256228 ACAGACAATAGTAGGTTTCTTCAGATA 57.744 33.333 0.00 0.00 0.00 1.98
292 293 8.037758 CACAGACAATAGTAGGTTTCTTCAGAT 58.962 37.037 0.00 0.00 0.00 2.90
293 294 7.232737 TCACAGACAATAGTAGGTTTCTTCAGA 59.767 37.037 0.00 0.00 0.00 3.27
294 295 7.378966 TCACAGACAATAGTAGGTTTCTTCAG 58.621 38.462 0.00 0.00 0.00 3.02
295 296 7.297936 TCACAGACAATAGTAGGTTTCTTCA 57.702 36.000 0.00 0.00 0.00 3.02
296 297 7.819900 ACATCACAGACAATAGTAGGTTTCTTC 59.180 37.037 0.00 0.00 0.00 2.87
297 298 7.604164 CACATCACAGACAATAGTAGGTTTCTT 59.396 37.037 0.00 0.00 0.00 2.52
298 299 7.099764 CACATCACAGACAATAGTAGGTTTCT 58.900 38.462 0.00 0.00 0.00 2.52
299 300 6.874134 ACACATCACAGACAATAGTAGGTTTC 59.126 38.462 0.00 0.00 0.00 2.78
300 301 6.769512 ACACATCACAGACAATAGTAGGTTT 58.230 36.000 0.00 0.00 0.00 3.27
301 302 6.360370 ACACATCACAGACAATAGTAGGTT 57.640 37.500 0.00 0.00 0.00 3.50
302 303 7.561722 AGATACACATCACAGACAATAGTAGGT 59.438 37.037 0.00 0.00 33.21 3.08
303 304 7.864882 CAGATACACATCACAGACAATAGTAGG 59.135 40.741 0.00 0.00 33.21 3.18
304 305 8.624776 TCAGATACACATCACAGACAATAGTAG 58.375 37.037 0.00 0.00 33.21 2.57
305 306 8.519799 TCAGATACACATCACAGACAATAGTA 57.480 34.615 0.00 0.00 33.21 1.82
306 307 7.410120 TCAGATACACATCACAGACAATAGT 57.590 36.000 0.00 0.00 33.21 2.12
307 308 8.707938 TTTCAGATACACATCACAGACAATAG 57.292 34.615 0.00 0.00 33.21 1.73
308 309 8.314021 ACTTTCAGATACACATCACAGACAATA 58.686 33.333 0.00 0.00 33.21 1.90
309 310 7.118825 CACTTTCAGATACACATCACAGACAAT 59.881 37.037 0.00 0.00 33.21 2.71
310 311 6.424812 CACTTTCAGATACACATCACAGACAA 59.575 38.462 0.00 0.00 33.21 3.18
311 312 5.928264 CACTTTCAGATACACATCACAGACA 59.072 40.000 0.00 0.00 33.21 3.41
312 313 6.159293 TCACTTTCAGATACACATCACAGAC 58.841 40.000 0.00 0.00 33.21 3.51
313 314 6.209391 TCTCACTTTCAGATACACATCACAGA 59.791 38.462 0.00 0.00 33.21 3.41
314 315 6.393171 TCTCACTTTCAGATACACATCACAG 58.607 40.000 0.00 0.00 33.21 3.66
315 316 6.345096 TCTCACTTTCAGATACACATCACA 57.655 37.500 0.00 0.00 33.21 3.58
316 317 7.547019 TCAATCTCACTTTCAGATACACATCAC 59.453 37.037 0.00 0.00 33.21 3.06
317 318 7.614494 TCAATCTCACTTTCAGATACACATCA 58.386 34.615 0.00 0.00 33.21 3.07
318 319 7.763528 ACTCAATCTCACTTTCAGATACACATC 59.236 37.037 0.00 0.00 29.97 3.06
319 320 7.548427 CACTCAATCTCACTTTCAGATACACAT 59.452 37.037 0.00 0.00 29.97 3.21
320 321 6.870439 CACTCAATCTCACTTTCAGATACACA 59.130 38.462 0.00 0.00 29.97 3.72
321 322 6.183360 GCACTCAATCTCACTTTCAGATACAC 60.183 42.308 0.00 0.00 29.97 2.90
322 323 5.871524 GCACTCAATCTCACTTTCAGATACA 59.128 40.000 0.00 0.00 29.97 2.29
323 324 5.293079 GGCACTCAATCTCACTTTCAGATAC 59.707 44.000 0.00 0.00 29.97 2.24
324 325 5.188555 AGGCACTCAATCTCACTTTCAGATA 59.811 40.000 0.00 0.00 29.97 1.98
325 326 4.019501 AGGCACTCAATCTCACTTTCAGAT 60.020 41.667 0.00 0.00 31.51 2.90
326 327 3.326006 AGGCACTCAATCTCACTTTCAGA 59.674 43.478 0.00 0.00 0.00 3.27
327 328 3.672808 AGGCACTCAATCTCACTTTCAG 58.327 45.455 0.00 0.00 0.00 3.02
328 329 3.777106 AGGCACTCAATCTCACTTTCA 57.223 42.857 0.00 0.00 0.00 2.69
329 330 4.997395 TGTTAGGCACTCAATCTCACTTTC 59.003 41.667 0.00 0.00 41.75 2.62
330 331 4.973168 TGTTAGGCACTCAATCTCACTTT 58.027 39.130 0.00 0.00 41.75 2.66
331 332 4.623932 TGTTAGGCACTCAATCTCACTT 57.376 40.909 0.00 0.00 41.75 3.16
332 333 4.511527 CATGTTAGGCACTCAATCTCACT 58.488 43.478 0.00 0.00 41.75 3.41
333 334 3.064545 GCATGTTAGGCACTCAATCTCAC 59.935 47.826 0.00 0.00 41.75 3.51
334 335 3.273434 GCATGTTAGGCACTCAATCTCA 58.727 45.455 0.00 0.00 41.75 3.27
335 336 2.615912 GGCATGTTAGGCACTCAATCTC 59.384 50.000 0.00 0.00 41.75 2.75
336 337 2.240667 AGGCATGTTAGGCACTCAATCT 59.759 45.455 0.00 0.00 41.75 2.40
337 338 2.648059 AGGCATGTTAGGCACTCAATC 58.352 47.619 0.00 0.00 41.75 2.67
338 339 2.756760 CAAGGCATGTTAGGCACTCAAT 59.243 45.455 0.00 0.00 41.75 2.57
339 340 2.161855 CAAGGCATGTTAGGCACTCAA 58.838 47.619 0.00 0.00 41.75 3.02
340 341 1.614051 CCAAGGCATGTTAGGCACTCA 60.614 52.381 0.00 0.00 41.75 3.41
341 342 1.098050 CCAAGGCATGTTAGGCACTC 58.902 55.000 0.00 0.00 41.75 3.51
342 343 0.323725 CCCAAGGCATGTTAGGCACT 60.324 55.000 0.00 0.00 46.37 4.40
343 344 1.322538 CCCCAAGGCATGTTAGGCAC 61.323 60.000 0.00 0.00 36.37 5.01
344 345 1.000233 CCCCAAGGCATGTTAGGCA 60.000 57.895 0.00 0.00 36.37 4.75
345 346 1.000359 ACCCCAAGGCATGTTAGGC 60.000 57.895 0.00 0.00 36.11 3.93
346 347 0.331278 TCACCCCAAGGCATGTTAGG 59.669 55.000 0.00 0.00 36.11 2.69
347 348 1.683011 CCTCACCCCAAGGCATGTTAG 60.683 57.143 0.00 0.00 36.11 2.34
348 349 0.331278 CCTCACCCCAAGGCATGTTA 59.669 55.000 0.00 0.00 36.11 2.41
349 350 1.077265 CCTCACCCCAAGGCATGTT 59.923 57.895 0.00 0.00 36.11 2.71
350 351 2.162906 ACCTCACCCCAAGGCATGT 61.163 57.895 0.00 0.00 37.42 3.21
351 352 1.679977 CACCTCACCCCAAGGCATG 60.680 63.158 0.00 0.00 37.42 4.06
352 353 2.765969 CACCTCACCCCAAGGCAT 59.234 61.111 0.00 0.00 37.42 4.40
353 354 3.579302 CCACCTCACCCCAAGGCA 61.579 66.667 0.00 0.00 37.42 4.75
354 355 3.580319 ACCACCTCACCCCAAGGC 61.580 66.667 0.00 0.00 37.42 4.35
355 356 2.436109 CACCACCTCACCCCAAGG 59.564 66.667 0.00 0.00 39.96 3.61
356 357 2.436109 CCACCACCTCACCCCAAG 59.564 66.667 0.00 0.00 0.00 3.61
357 358 3.897122 GCCACCACCTCACCCCAA 61.897 66.667 0.00 0.00 0.00 4.12
380 381 2.663630 CTACTCGTGGGATGACGCCG 62.664 65.000 0.00 0.00 39.27 6.46
381 382 1.065928 CTACTCGTGGGATGACGCC 59.934 63.158 0.00 0.00 39.27 5.68
382 383 1.065928 CCTACTCGTGGGATGACGC 59.934 63.158 0.00 0.00 39.27 5.19
390 391 4.208686 GAGGCGCCCTACTCGTGG 62.209 72.222 26.15 0.00 31.76 4.94
394 395 3.902086 GGTCGAGGCGCCCTACTC 61.902 72.222 26.15 13.64 31.76 2.59
395 396 4.753662 TGGTCGAGGCGCCCTACT 62.754 66.667 26.15 3.43 31.76 2.57
396 397 4.208686 CTGGTCGAGGCGCCCTAC 62.209 72.222 26.15 18.68 31.76 3.18
405 406 2.685387 GATAGCGTGGCCTGGTCGAG 62.685 65.000 3.32 1.06 0.00 4.04
406 407 2.758327 ATAGCGTGGCCTGGTCGA 60.758 61.111 3.32 0.00 0.00 4.20
407 408 2.279517 GATAGCGTGGCCTGGTCG 60.280 66.667 3.32 5.05 0.00 4.79
408 409 1.227380 CTGATAGCGTGGCCTGGTC 60.227 63.158 3.32 0.00 0.00 4.02
409 410 2.903357 CTGATAGCGTGGCCTGGT 59.097 61.111 3.32 4.72 0.00 4.00
410 411 2.590007 GCTGATAGCGTGGCCTGG 60.590 66.667 3.32 0.00 0.00 4.45
419 420 2.590007 CCACCGCCAGCTGATAGC 60.590 66.667 17.39 9.51 42.84 2.97
420 421 2.590007 GCCACCGCCAGCTGATAG 60.590 66.667 17.39 5.22 0.00 2.08
421 422 3.390183 CTGCCACCGCCAGCTGATA 62.390 63.158 17.39 0.00 0.00 2.15
422 423 4.790962 CTGCCACCGCCAGCTGAT 62.791 66.667 17.39 0.00 0.00 2.90
454 455 2.809601 CTTCCTCGTCCGTTGCCG 60.810 66.667 0.00 0.00 0.00 5.69
455 456 2.434359 CCTTCCTCGTCCGTTGCC 60.434 66.667 0.00 0.00 0.00 4.52
456 457 2.434359 CCCTTCCTCGTCCGTTGC 60.434 66.667 0.00 0.00 0.00 4.17
457 458 1.614241 ATCCCCTTCCTCGTCCGTTG 61.614 60.000 0.00 0.00 0.00 4.10
458 459 1.305887 ATCCCCTTCCTCGTCCGTT 60.306 57.895 0.00 0.00 0.00 4.44
459 460 2.058595 CATCCCCTTCCTCGTCCGT 61.059 63.158 0.00 0.00 0.00 4.69
460 461 2.797278 CCATCCCCTTCCTCGTCCG 61.797 68.421 0.00 0.00 0.00 4.79
461 462 2.444256 CCCATCCCCTTCCTCGTCC 61.444 68.421 0.00 0.00 0.00 4.79
462 463 3.108288 GCCCATCCCCTTCCTCGTC 62.108 68.421 0.00 0.00 0.00 4.20
463 464 3.090532 GCCCATCCCCTTCCTCGT 61.091 66.667 0.00 0.00 0.00 4.18
464 465 4.241555 CGCCCATCCCCTTCCTCG 62.242 72.222 0.00 0.00 0.00 4.63
465 466 3.878667 CCGCCCATCCCCTTCCTC 61.879 72.222 0.00 0.00 0.00 3.71
474 475 4.918201 CTTCCTCCGCCGCCCATC 62.918 72.222 0.00 0.00 0.00 3.51
480 481 4.468689 GGTTCCCTTCCTCCGCCG 62.469 72.222 0.00 0.00 0.00 6.46
481 482 4.111053 GGGTTCCCTTCCTCCGCC 62.111 72.222 0.00 0.00 0.00 6.13
482 483 1.687297 CTAGGGTTCCCTTCCTCCGC 61.687 65.000 16.05 0.00 37.64 5.54
483 484 0.032416 TCTAGGGTTCCCTTCCTCCG 60.032 60.000 16.05 0.00 37.64 4.63
484 485 2.265526 TTCTAGGGTTCCCTTCCTCC 57.734 55.000 16.05 0.00 37.64 4.30
485 486 4.652679 TTTTTCTAGGGTTCCCTTCCTC 57.347 45.455 16.05 0.00 37.64 3.71
503 504 2.841160 GCGACCGCACACCCTTTTT 61.841 57.895 9.73 0.00 41.49 1.94
504 505 3.284449 GCGACCGCACACCCTTTT 61.284 61.111 9.73 0.00 41.49 2.27
514 515 3.499737 CATGAACCCTGCGACCGC 61.500 66.667 7.53 7.53 42.35 5.68
515 516 2.047274 ACATGAACCCTGCGACCG 60.047 61.111 0.00 0.00 0.00 4.79
516 517 2.040544 CCACATGAACCCTGCGACC 61.041 63.158 0.00 0.00 0.00 4.79
517 518 0.392998 ATCCACATGAACCCTGCGAC 60.393 55.000 0.00 0.00 0.00 5.19
518 519 0.327924 AATCCACATGAACCCTGCGA 59.672 50.000 0.00 0.00 0.00 5.10
519 520 1.176527 AAATCCACATGAACCCTGCG 58.823 50.000 0.00 0.00 0.00 5.18
520 521 2.354003 CCAAAATCCACATGAACCCTGC 60.354 50.000 0.00 0.00 0.00 4.85
521 522 2.899256 ACCAAAATCCACATGAACCCTG 59.101 45.455 0.00 0.00 0.00 4.45
522 523 2.899256 CACCAAAATCCACATGAACCCT 59.101 45.455 0.00 0.00 0.00 4.34
523 524 2.028203 CCACCAAAATCCACATGAACCC 60.028 50.000 0.00 0.00 0.00 4.11
524 525 2.028203 CCCACCAAAATCCACATGAACC 60.028 50.000 0.00 0.00 0.00 3.62
525 526 2.632512 ACCCACCAAAATCCACATGAAC 59.367 45.455 0.00 0.00 0.00 3.18
526 527 2.632028 CACCCACCAAAATCCACATGAA 59.368 45.455 0.00 0.00 0.00 2.57
527 528 2.158400 TCACCCACCAAAATCCACATGA 60.158 45.455 0.00 0.00 0.00 3.07
528 529 2.246469 TCACCCACCAAAATCCACATG 58.754 47.619 0.00 0.00 0.00 3.21
529 530 2.692709 TCACCCACCAAAATCCACAT 57.307 45.000 0.00 0.00 0.00 3.21
530 531 2.461300 TTCACCCACCAAAATCCACA 57.539 45.000 0.00 0.00 0.00 4.17
531 532 3.828875 TTTTCACCCACCAAAATCCAC 57.171 42.857 0.00 0.00 0.00 4.02
549 550 1.112916 CCCCTTCACGCTGGGTTTTT 61.113 55.000 0.00 0.00 41.82 1.94
550 551 1.530655 CCCCTTCACGCTGGGTTTT 60.531 57.895 0.00 0.00 41.82 2.43
551 552 2.115266 CCCCTTCACGCTGGGTTT 59.885 61.111 0.00 0.00 41.82 3.27
554 555 4.722700 CCACCCCTTCACGCTGGG 62.723 72.222 0.00 0.00 45.34 4.45
560 561 4.410400 CTCCCGCCACCCCTTCAC 62.410 72.222 0.00 0.00 0.00 3.18
567 568 4.083862 GTCTCACCTCCCGCCACC 62.084 72.222 0.00 0.00 0.00 4.61
568 569 4.436998 CGTCTCACCTCCCGCCAC 62.437 72.222 0.00 0.00 0.00 5.01
571 572 2.444700 TTTTCCGTCTCACCTCCCGC 62.445 60.000 0.00 0.00 0.00 6.13
572 573 0.034337 TTTTTCCGTCTCACCTCCCG 59.966 55.000 0.00 0.00 0.00 5.14
600 601 5.655532 CCCTCATCTCTCACCATCAATTTTT 59.344 40.000 0.00 0.00 0.00 1.94
601 602 5.044624 TCCCTCATCTCTCACCATCAATTTT 60.045 40.000 0.00 0.00 0.00 1.82
602 603 4.476113 TCCCTCATCTCTCACCATCAATTT 59.524 41.667 0.00 0.00 0.00 1.82
603 604 4.042884 TCCCTCATCTCTCACCATCAATT 58.957 43.478 0.00 0.00 0.00 2.32
604 605 3.662078 TCCCTCATCTCTCACCATCAAT 58.338 45.455 0.00 0.00 0.00 2.57
605 606 3.120468 TCCCTCATCTCTCACCATCAA 57.880 47.619 0.00 0.00 0.00 2.57
606 607 2.854736 TCCCTCATCTCTCACCATCA 57.145 50.000 0.00 0.00 0.00 3.07
607 608 4.494091 TTTTCCCTCATCTCTCACCATC 57.506 45.455 0.00 0.00 0.00 3.51
608 609 4.934797 TTTTTCCCTCATCTCTCACCAT 57.065 40.909 0.00 0.00 0.00 3.55
626 627 7.201574 GGGTTTTTCGCTATTTTGTCTGTTTTT 60.202 33.333 0.00 0.00 0.00 1.94
627 628 6.256975 GGGTTTTTCGCTATTTTGTCTGTTTT 59.743 34.615 0.00 0.00 0.00 2.43
628 629 5.751509 GGGTTTTTCGCTATTTTGTCTGTTT 59.248 36.000 0.00 0.00 0.00 2.83
629 630 5.286438 GGGTTTTTCGCTATTTTGTCTGTT 58.714 37.500 0.00 0.00 0.00 3.16
630 631 4.555906 CGGGTTTTTCGCTATTTTGTCTGT 60.556 41.667 0.00 0.00 0.00 3.41
631 632 3.911964 CGGGTTTTTCGCTATTTTGTCTG 59.088 43.478 0.00 0.00 0.00 3.51
632 633 3.566742 ACGGGTTTTTCGCTATTTTGTCT 59.433 39.130 0.00 0.00 0.00 3.41
633 634 3.666797 CACGGGTTTTTCGCTATTTTGTC 59.333 43.478 0.00 0.00 0.00 3.18
634 635 3.551250 CCACGGGTTTTTCGCTATTTTGT 60.551 43.478 0.00 0.00 0.00 2.83
635 636 2.983803 CCACGGGTTTTTCGCTATTTTG 59.016 45.455 0.00 0.00 0.00 2.44
636 637 2.885894 TCCACGGGTTTTTCGCTATTTT 59.114 40.909 0.00 0.00 0.00 1.82
637 638 2.506444 TCCACGGGTTTTTCGCTATTT 58.494 42.857 0.00 0.00 0.00 1.40
638 639 2.188062 TCCACGGGTTTTTCGCTATT 57.812 45.000 0.00 0.00 0.00 1.73
639 640 1.808343 GTTCCACGGGTTTTTCGCTAT 59.192 47.619 0.00 0.00 0.00 2.97
640 641 1.228533 GTTCCACGGGTTTTTCGCTA 58.771 50.000 0.00 0.00 0.00 4.26
641 642 1.778027 CGTTCCACGGGTTTTTCGCT 61.778 55.000 0.00 0.00 38.08 4.93
642 643 1.369568 CGTTCCACGGGTTTTTCGC 60.370 57.895 0.00 0.00 38.08 4.70
643 644 0.656785 TTCGTTCCACGGGTTTTTCG 59.343 50.000 0.00 0.00 42.81 3.46
644 645 1.672363 ACTTCGTTCCACGGGTTTTTC 59.328 47.619 0.00 0.00 42.81 2.29
645 646 1.753930 ACTTCGTTCCACGGGTTTTT 58.246 45.000 0.00 0.00 42.81 1.94
646 647 1.753930 AACTTCGTTCCACGGGTTTT 58.246 45.000 0.00 0.00 42.81 2.43
647 648 2.212652 GTAACTTCGTTCCACGGGTTT 58.787 47.619 11.49 0.45 42.81 3.27
648 649 1.541015 GGTAACTTCGTTCCACGGGTT 60.541 52.381 11.17 11.17 42.81 4.11
649 650 0.033920 GGTAACTTCGTTCCACGGGT 59.966 55.000 0.00 0.00 42.81 5.28
650 651 1.010419 CGGTAACTTCGTTCCACGGG 61.010 60.000 0.00 0.00 42.81 5.28
651 652 0.039256 TCGGTAACTTCGTTCCACGG 60.039 55.000 0.00 0.00 42.81 4.94
652 653 1.769733 TTCGGTAACTTCGTTCCACG 58.230 50.000 0.00 0.00 44.19 4.94
653 654 2.669924 GGATTCGGTAACTTCGTTCCAC 59.330 50.000 0.00 0.00 34.09 4.02
654 655 2.354003 GGGATTCGGTAACTTCGTTCCA 60.354 50.000 0.00 0.00 34.89 3.53
655 656 2.093816 AGGGATTCGGTAACTTCGTTCC 60.094 50.000 0.00 0.00 33.59 3.62
656 657 3.119209 AGAGGGATTCGGTAACTTCGTTC 60.119 47.826 0.00 0.00 0.00 3.95
657 658 2.830321 AGAGGGATTCGGTAACTTCGTT 59.170 45.455 0.00 0.00 0.00 3.85
658 659 2.454538 AGAGGGATTCGGTAACTTCGT 58.545 47.619 0.00 0.00 0.00 3.85
659 660 3.521947 AAGAGGGATTCGGTAACTTCG 57.478 47.619 0.00 0.00 0.00 3.79
660 661 6.218108 TCTAAAGAGGGATTCGGTAACTTC 57.782 41.667 0.00 0.00 0.00 3.01
661 662 6.212993 ACTTCTAAAGAGGGATTCGGTAACTT 59.787 38.462 0.00 0.00 0.00 2.66
662 663 5.720520 ACTTCTAAAGAGGGATTCGGTAACT 59.279 40.000 0.00 0.00 0.00 2.24
663 664 5.811100 CACTTCTAAAGAGGGATTCGGTAAC 59.189 44.000 0.00 0.00 0.00 2.50
664 665 5.105064 CCACTTCTAAAGAGGGATTCGGTAA 60.105 44.000 0.00 0.00 35.84 2.85
665 666 4.404715 CCACTTCTAAAGAGGGATTCGGTA 59.595 45.833 0.00 0.00 35.84 4.02
666 667 3.197983 CCACTTCTAAAGAGGGATTCGGT 59.802 47.826 0.00 0.00 35.84 4.69
667 668 3.451178 TCCACTTCTAAAGAGGGATTCGG 59.549 47.826 3.78 0.00 39.42 4.30
668 669 4.402793 TCTCCACTTCTAAAGAGGGATTCG 59.597 45.833 3.78 0.00 39.42 3.34
669 670 5.941555 TCTCCACTTCTAAAGAGGGATTC 57.058 43.478 3.78 0.00 39.42 2.52
670 671 8.574309 AATATCTCCACTTCTAAAGAGGGATT 57.426 34.615 3.78 0.00 39.42 3.01
671 672 8.574309 AAATATCTCCACTTCTAAAGAGGGAT 57.426 34.615 3.78 7.46 39.42 3.85
672 673 7.846823 AGAAATATCTCCACTTCTAAAGAGGGA 59.153 37.037 3.78 4.63 39.42 4.20
673 674 8.028652 AGAAATATCTCCACTTCTAAAGAGGG 57.971 38.462 3.78 0.93 39.42 4.30
674 675 9.974980 GTAGAAATATCTCCACTTCTAAAGAGG 57.025 37.037 0.00 0.00 40.20 3.69
677 678 9.535878 GGTGTAGAAATATCTCCACTTCTAAAG 57.464 37.037 2.31 0.00 41.06 1.85
678 679 8.195436 CGGTGTAGAAATATCTCCACTTCTAAA 58.805 37.037 2.31 0.00 41.06 1.85
679 680 7.341256 ACGGTGTAGAAATATCTCCACTTCTAA 59.659 37.037 2.31 0.00 41.06 2.10
680 681 6.832384 ACGGTGTAGAAATATCTCCACTTCTA 59.168 38.462 2.31 0.00 41.06 2.10
681 682 5.657302 ACGGTGTAGAAATATCTCCACTTCT 59.343 40.000 2.31 0.00 41.06 2.85
682 683 5.903810 ACGGTGTAGAAATATCTCCACTTC 58.096 41.667 2.31 0.00 41.06 3.01
683 684 5.934402 ACGGTGTAGAAATATCTCCACTT 57.066 39.130 2.31 0.00 41.06 3.16
684 685 7.414222 TTTACGGTGTAGAAATATCTCCACT 57.586 36.000 2.31 0.00 41.06 4.00
685 686 7.546667 TGTTTTACGGTGTAGAAATATCTCCAC 59.453 37.037 0.00 0.00 40.69 4.02
686 687 7.613585 TGTTTTACGGTGTAGAAATATCTCCA 58.386 34.615 0.00 0.00 37.10 3.86
687 688 8.483307 TTGTTTTACGGTGTAGAAATATCTCC 57.517 34.615 0.00 0.00 37.10 3.71
689 690 9.661563 TGATTGTTTTACGGTGTAGAAATATCT 57.338 29.630 0.00 0.00 39.82 1.98
690 691 9.698617 GTGATTGTTTTACGGTGTAGAAATATC 57.301 33.333 0.00 0.00 0.00 1.63
691 692 9.444600 AGTGATTGTTTTACGGTGTAGAAATAT 57.555 29.630 0.00 0.00 0.00 1.28
692 693 8.836268 AGTGATTGTTTTACGGTGTAGAAATA 57.164 30.769 0.00 0.00 0.00 1.40
693 694 7.739498 AGTGATTGTTTTACGGTGTAGAAAT 57.261 32.000 0.00 0.00 0.00 2.17
694 695 7.710044 TGTAGTGATTGTTTTACGGTGTAGAAA 59.290 33.333 0.00 0.00 0.00 2.52
695 696 7.208777 TGTAGTGATTGTTTTACGGTGTAGAA 58.791 34.615 0.00 0.00 0.00 2.10
696 697 6.747125 TGTAGTGATTGTTTTACGGTGTAGA 58.253 36.000 0.00 0.00 0.00 2.59
697 698 7.042590 TGTTGTAGTGATTGTTTTACGGTGTAG 60.043 37.037 0.00 0.00 0.00 2.74
698 699 6.760298 TGTTGTAGTGATTGTTTTACGGTGTA 59.240 34.615 0.00 0.00 0.00 2.90
699 700 5.585445 TGTTGTAGTGATTGTTTTACGGTGT 59.415 36.000 0.00 0.00 0.00 4.16
700 701 6.018588 TCTGTTGTAGTGATTGTTTTACGGTG 60.019 38.462 0.00 0.00 0.00 4.94
701 702 6.050432 TCTGTTGTAGTGATTGTTTTACGGT 58.950 36.000 0.00 0.00 0.00 4.83
702 703 6.533819 TCTGTTGTAGTGATTGTTTTACGG 57.466 37.500 0.00 0.00 0.00 4.02
703 704 8.422080 CAATCTGTTGTAGTGATTGTTTTACG 57.578 34.615 0.00 0.00 40.97 3.18
714 715 7.468494 TGGAAACATCAACAATCTGTTGTAGTG 60.468 37.037 16.75 15.47 46.36 2.74
715 716 6.545666 TGGAAACATCAACAATCTGTTGTAGT 59.454 34.615 16.75 13.66 46.36 2.73
716 717 6.969366 TGGAAACATCAACAATCTGTTGTAG 58.031 36.000 16.75 13.16 46.36 2.74
717 718 6.951062 TGGAAACATCAACAATCTGTTGTA 57.049 33.333 16.75 6.73 46.36 2.41
718 719 5.850557 TGGAAACATCAACAATCTGTTGT 57.149 34.783 16.75 0.67 46.36 3.32
822 826 1.204941 AGCCGAAGATGTGTGAGGTAC 59.795 52.381 0.00 0.00 0.00 3.34
823 827 1.204704 CAGCCGAAGATGTGTGAGGTA 59.795 52.381 0.00 0.00 0.00 3.08
824 828 0.036952 CAGCCGAAGATGTGTGAGGT 60.037 55.000 0.00 0.00 0.00 3.85
825 829 0.247460 TCAGCCGAAGATGTGTGAGG 59.753 55.000 0.00 0.00 0.00 3.86
826 830 1.203287 TCTCAGCCGAAGATGTGTGAG 59.797 52.381 0.00 0.00 34.06 3.51
827 831 1.256812 TCTCAGCCGAAGATGTGTGA 58.743 50.000 0.00 0.00 0.00 3.58
828 832 2.084610 TTCTCAGCCGAAGATGTGTG 57.915 50.000 0.00 0.00 0.00 3.82
829 833 2.736719 CGATTCTCAGCCGAAGATGTGT 60.737 50.000 0.00 0.00 0.00 3.72
881 891 1.369091 ATCGCTGCATTTCGGTGGTC 61.369 55.000 0.00 0.00 32.48 4.02
1022 1049 1.599542 GCGCTCTTCTCTCTCTCTCTC 59.400 57.143 0.00 0.00 0.00 3.20
1023 1050 1.668419 GCGCTCTTCTCTCTCTCTCT 58.332 55.000 0.00 0.00 0.00 3.10
1024 1051 0.304705 CGCGCTCTTCTCTCTCTCTC 59.695 60.000 5.56 0.00 0.00 3.20
1025 1052 0.107897 TCGCGCTCTTCTCTCTCTCT 60.108 55.000 5.56 0.00 0.00 3.10
1026 1053 0.944386 ATCGCGCTCTTCTCTCTCTC 59.056 55.000 5.56 0.00 0.00 3.20
1027 1054 0.944386 GATCGCGCTCTTCTCTCTCT 59.056 55.000 5.56 0.00 0.00 3.10
1028 1055 0.384230 CGATCGCGCTCTTCTCTCTC 60.384 60.000 5.56 0.00 0.00 3.20
1029 1056 1.646540 CGATCGCGCTCTTCTCTCT 59.353 57.895 5.56 0.00 0.00 3.10
1030 1057 4.203967 CGATCGCGCTCTTCTCTC 57.796 61.111 5.56 0.00 0.00 3.20
1081 1108 2.212811 ATCTCCATGGATCGGCGCT 61.213 57.895 16.63 0.00 0.00 5.92
1400 1427 4.947147 GCCCCGTTGCTGACACCA 62.947 66.667 0.00 0.00 0.00 4.17
1694 1732 3.121030 ATGCACGTCGCTGGCTTC 61.121 61.111 10.54 0.00 43.06 3.86
1774 1815 4.494350 AACTAGTTGTGCAAGCAAGATG 57.506 40.909 7.48 0.00 0.00 2.90
1836 1877 2.334006 AGTCCAGTGACCCAGAGAAT 57.666 50.000 0.00 0.00 42.81 2.40
1875 1916 9.585099 TGCTTTATTGGATCATGTTTTACAATC 57.415 29.630 6.74 0.00 31.71 2.67
1926 1968 3.678072 TCCGTTCATCGAAAGCTTACAAG 59.322 43.478 0.00 0.00 42.86 3.16
1945 1987 0.240145 TCGTGTGTAGAGCAGTTCCG 59.760 55.000 0.00 0.00 0.00 4.30
1946 1988 1.000607 TGTCGTGTGTAGAGCAGTTCC 60.001 52.381 0.00 0.00 0.00 3.62
1948 1990 2.864343 GTTTGTCGTGTGTAGAGCAGTT 59.136 45.455 0.00 0.00 0.00 3.16
1949 1991 2.159156 TGTTTGTCGTGTGTAGAGCAGT 60.159 45.455 0.00 0.00 0.00 4.40
1950 1992 2.218759 GTGTTTGTCGTGTGTAGAGCAG 59.781 50.000 0.00 0.00 0.00 4.24
1951 1993 2.159156 AGTGTTTGTCGTGTGTAGAGCA 60.159 45.455 0.00 0.00 0.00 4.26
1952 1994 2.470821 AGTGTTTGTCGTGTGTAGAGC 58.529 47.619 0.00 0.00 0.00 4.09
1953 1995 4.090066 GCATAGTGTTTGTCGTGTGTAGAG 59.910 45.833 0.00 0.00 0.00 2.43
1954 1996 3.985279 GCATAGTGTTTGTCGTGTGTAGA 59.015 43.478 0.00 0.00 0.00 2.59
1956 1998 3.491639 GTGCATAGTGTTTGTCGTGTGTA 59.508 43.478 0.00 0.00 0.00 2.90
1957 1999 2.286833 GTGCATAGTGTTTGTCGTGTGT 59.713 45.455 0.00 0.00 0.00 3.72
1958 2000 2.543848 AGTGCATAGTGTTTGTCGTGTG 59.456 45.455 0.00 0.00 0.00 3.82
1960 2002 2.662791 GCAGTGCATAGTGTTTGTCGTG 60.663 50.000 11.09 0.00 0.00 4.35
1961 2003 1.531149 GCAGTGCATAGTGTTTGTCGT 59.469 47.619 11.09 0.00 0.00 4.34
1962 2004 1.135972 GGCAGTGCATAGTGTTTGTCG 60.136 52.381 18.61 0.00 0.00 4.35
1963 2005 2.154462 AGGCAGTGCATAGTGTTTGTC 58.846 47.619 18.61 0.00 0.00 3.18
1964 2006 2.276732 AGGCAGTGCATAGTGTTTGT 57.723 45.000 18.61 0.00 0.00 2.83
1965 2007 3.119849 GGTTAGGCAGTGCATAGTGTTTG 60.120 47.826 18.61 0.00 0.00 2.93
1966 2008 3.081804 GGTTAGGCAGTGCATAGTGTTT 58.918 45.455 18.61 0.00 0.00 2.83
1967 2009 2.039746 TGGTTAGGCAGTGCATAGTGTT 59.960 45.455 18.61 0.00 0.00 3.32
1968 2010 1.628340 TGGTTAGGCAGTGCATAGTGT 59.372 47.619 18.61 0.00 0.00 3.55
1969 2011 2.283298 CTGGTTAGGCAGTGCATAGTG 58.717 52.381 18.61 2.10 0.00 2.74
1970 2012 1.909302 ACTGGTTAGGCAGTGCATAGT 59.091 47.619 18.61 7.30 0.00 2.12
1971 2013 2.555199 GACTGGTTAGGCAGTGCATAG 58.445 52.381 18.61 6.59 0.00 2.23
1972 2014 1.134818 CGACTGGTTAGGCAGTGCATA 60.135 52.381 18.61 12.12 0.00 3.14
1973 2015 0.391661 CGACTGGTTAGGCAGTGCAT 60.392 55.000 18.61 13.40 0.00 3.96
1974 2016 1.005037 CGACTGGTTAGGCAGTGCA 60.005 57.895 18.61 0.00 0.00 4.57
2010 2075 6.595682 TCATGTTTCTCCCCTGAAATATCTC 58.404 40.000 0.00 0.00 36.23 2.75
2072 2137 2.159198 GCCGGAGCAATGAAATGAATGT 60.159 45.455 5.05 0.00 39.53 2.71
2074 2139 2.381911 AGCCGGAGCAATGAAATGAAT 58.618 42.857 5.05 0.00 43.56 2.57
2248 2315 1.202268 CGTAACCGAAGAGTAGCCTGG 60.202 57.143 0.00 0.00 35.63 4.45
2305 2372 7.130775 AGTTTGATAGTTCCCTTAGCCTAGTA 58.869 38.462 0.00 0.00 0.00 1.82
2324 2391 3.072330 TCTGGTATGCAGGACAAGTTTGA 59.928 43.478 5.96 0.00 0.00 2.69
2325 2392 3.411446 TCTGGTATGCAGGACAAGTTTG 58.589 45.455 5.96 0.00 0.00 2.93
2326 2393 3.679389 CTCTGGTATGCAGGACAAGTTT 58.321 45.455 5.96 0.00 0.00 2.66
2434 2552 2.287668 GGCATGCTCAGATGCTGAAATC 60.288 50.000 18.92 0.00 46.74 2.17
2479 2597 5.422214 TCTCTAAAACCCATTGAGGTCTC 57.578 43.478 0.00 0.00 40.05 3.36
2480 2598 7.698163 ATATCTCTAAAACCCATTGAGGTCT 57.302 36.000 0.00 0.00 40.05 3.85
2550 2668 1.698532 GGGCATCTGTCTGAGGATGAT 59.301 52.381 18.64 1.79 41.05 2.45
2587 2755 7.995488 CCCTAATGATGTCCTTAATCAACTTCT 59.005 37.037 0.00 0.00 37.58 2.85
2588 2756 7.775561 ACCCTAATGATGTCCTTAATCAACTTC 59.224 37.037 0.00 0.00 37.58 3.01
2589 2757 7.643123 ACCCTAATGATGTCCTTAATCAACTT 58.357 34.615 0.00 0.00 37.58 2.66
2590 2758 7.213178 ACCCTAATGATGTCCTTAATCAACT 57.787 36.000 0.00 0.00 37.58 3.16
2591 2759 9.574516 AATACCCTAATGATGTCCTTAATCAAC 57.425 33.333 0.00 0.00 37.58 3.18
2592 2760 9.573166 CAATACCCTAATGATGTCCTTAATCAA 57.427 33.333 0.00 0.00 37.58 2.57
2593 2761 8.723365 ACAATACCCTAATGATGTCCTTAATCA 58.277 33.333 0.00 0.00 38.37 2.57
2594 2762 9.003658 CACAATACCCTAATGATGTCCTTAATC 57.996 37.037 0.00 0.00 0.00 1.75
2595 2763 7.448469 GCACAATACCCTAATGATGTCCTTAAT 59.552 37.037 0.00 0.00 0.00 1.40
2596 2764 6.770785 GCACAATACCCTAATGATGTCCTTAA 59.229 38.462 0.00 0.00 0.00 1.85
2597 2765 6.126623 TGCACAATACCCTAATGATGTCCTTA 60.127 38.462 0.00 0.00 0.00 2.69
2598 2766 5.133221 GCACAATACCCTAATGATGTCCTT 58.867 41.667 0.00 0.00 0.00 3.36
2599 2767 4.165950 TGCACAATACCCTAATGATGTCCT 59.834 41.667 0.00 0.00 0.00 3.85
2600 2768 4.460263 TGCACAATACCCTAATGATGTCC 58.540 43.478 0.00 0.00 0.00 4.02
2601 2769 6.449635 TTTGCACAATACCCTAATGATGTC 57.550 37.500 0.00 0.00 0.00 3.06
2602 2770 6.606796 TGATTTGCACAATACCCTAATGATGT 59.393 34.615 0.00 0.00 0.00 3.06
2603 2771 7.041635 TGATTTGCACAATACCCTAATGATG 57.958 36.000 0.00 0.00 0.00 3.07
2604 2772 7.658525 TTGATTTGCACAATACCCTAATGAT 57.341 32.000 0.00 0.00 0.00 2.45
2605 2773 7.473735 TTTGATTTGCACAATACCCTAATGA 57.526 32.000 0.00 0.00 0.00 2.57
2606 2774 8.721019 ATTTTGATTTGCACAATACCCTAATG 57.279 30.769 0.00 0.00 0.00 1.90
2607 2775 8.761689 AGATTTTGATTTGCACAATACCCTAAT 58.238 29.630 0.00 0.00 27.44 1.73
2608 2776 8.034215 CAGATTTTGATTTGCACAATACCCTAA 58.966 33.333 0.00 0.00 27.44 2.69
2609 2777 7.363705 CCAGATTTTGATTTGCACAATACCCTA 60.364 37.037 0.00 0.00 27.44 3.53
2610 2778 6.400568 CAGATTTTGATTTGCACAATACCCT 58.599 36.000 0.00 0.00 27.44 4.34
2611 2779 5.581874 CCAGATTTTGATTTGCACAATACCC 59.418 40.000 0.00 0.00 27.44 3.69
2612 2780 5.581874 CCCAGATTTTGATTTGCACAATACC 59.418 40.000 0.00 0.00 27.44 2.73
2613 2781 6.091169 CACCCAGATTTTGATTTGCACAATAC 59.909 38.462 0.00 0.00 27.44 1.89
2614 2782 6.164876 CACCCAGATTTTGATTTGCACAATA 58.835 36.000 0.00 0.00 27.44 1.90
2615 2783 4.998672 CACCCAGATTTTGATTTGCACAAT 59.001 37.500 0.00 0.00 29.85 2.71
2616 2784 4.141756 ACACCCAGATTTTGATTTGCACAA 60.142 37.500 0.00 0.00 0.00 3.33
2617 2785 3.387374 ACACCCAGATTTTGATTTGCACA 59.613 39.130 0.00 0.00 0.00 4.57
2618 2786 3.993920 ACACCCAGATTTTGATTTGCAC 58.006 40.909 0.00 0.00 0.00 4.57
2619 2787 4.321899 GCTACACCCAGATTTTGATTTGCA 60.322 41.667 0.00 0.00 0.00 4.08
2620 2788 4.082026 AGCTACACCCAGATTTTGATTTGC 60.082 41.667 0.00 0.00 0.00 3.68
2621 2789 5.649782 AGCTACACCCAGATTTTGATTTG 57.350 39.130 0.00 0.00 0.00 2.32
2622 2790 6.721318 TCTAGCTACACCCAGATTTTGATTT 58.279 36.000 0.00 0.00 0.00 2.17
2623 2791 6.313519 TCTAGCTACACCCAGATTTTGATT 57.686 37.500 0.00 0.00 0.00 2.57
2624 2792 5.957771 TCTAGCTACACCCAGATTTTGAT 57.042 39.130 0.00 0.00 0.00 2.57
2625 2793 5.189736 ACATCTAGCTACACCCAGATTTTGA 59.810 40.000 0.00 0.00 0.00 2.69
2626 2794 5.431765 ACATCTAGCTACACCCAGATTTTG 58.568 41.667 0.00 0.00 0.00 2.44
2627 2795 5.700402 ACATCTAGCTACACCCAGATTTT 57.300 39.130 0.00 0.00 0.00 1.82
2628 2796 5.189736 TCAACATCTAGCTACACCCAGATTT 59.810 40.000 0.00 0.00 0.00 2.17
2629 2797 4.716784 TCAACATCTAGCTACACCCAGATT 59.283 41.667 0.00 0.00 0.00 2.40
2630 2798 4.290093 TCAACATCTAGCTACACCCAGAT 58.710 43.478 0.00 0.00 0.00 2.90
2631 2799 3.708451 TCAACATCTAGCTACACCCAGA 58.292 45.455 0.00 0.00 0.00 3.86
2632 2800 4.100035 TCATCAACATCTAGCTACACCCAG 59.900 45.833 0.00 0.00 0.00 4.45
2633 2801 4.030216 TCATCAACATCTAGCTACACCCA 58.970 43.478 0.00 0.00 0.00 4.51
2634 2802 4.672587 TCATCAACATCTAGCTACACCC 57.327 45.455 0.00 0.00 0.00 4.61
2635 2803 6.256757 GTCTTTCATCAACATCTAGCTACACC 59.743 42.308 0.00 0.00 0.00 4.16
2636 2804 6.813649 TGTCTTTCATCAACATCTAGCTACAC 59.186 38.462 0.00 0.00 0.00 2.90
2644 2812 7.281040 ACACAAATGTCTTTCATCAACATCT 57.719 32.000 0.00 0.00 31.55 2.90
2703 2873 0.583438 CTGTGCAGACCAGTTGTTCG 59.417 55.000 0.00 0.00 0.00 3.95
2710 2880 2.614446 GCTGTGCTGTGCAGACCAG 61.614 63.158 3.02 8.41 40.08 4.00
2717 2887 0.386858 CATGAACTGCTGTGCTGTGC 60.387 55.000 3.09 2.15 40.40 4.57
2718 2888 0.240145 CCATGAACTGCTGTGCTGTG 59.760 55.000 3.09 2.55 40.40 3.66
2719 2889 0.109153 TCCATGAACTGCTGTGCTGT 59.891 50.000 3.09 0.00 42.21 4.40
2720 2890 0.803117 CTCCATGAACTGCTGTGCTG 59.197 55.000 3.09 0.00 0.00 4.41
2721 2891 0.689055 TCTCCATGAACTGCTGTGCT 59.311 50.000 3.09 0.00 0.00 4.40
2780 2951 0.111253 CCTGACTTTTCACCCCAGCT 59.889 55.000 0.00 0.00 0.00 4.24
2803 2974 8.004215 TGCACCTGGATATATTCAAAGGTAAAT 58.996 33.333 0.00 0.00 39.64 1.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.