Multiple sequence alignment - TraesCS4D01G207900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G207900 chr4D 100.000 3031 0 0 580 3610 357531797 357528767 0.000000e+00 5598
1 TraesCS4D01G207900 chr4D 100.000 285 0 0 1 285 357532376 357532092 8.880000e-146 527
2 TraesCS4D01G207900 chr4D 96.140 285 11 0 1 285 485474089 485473805 1.960000e-127 466
3 TraesCS4D01G207900 chr4D 95.088 285 14 0 1 285 483987862 483987578 1.980000e-122 449
4 TraesCS4D01G207900 chr4D 94.928 138 5 2 3208 3343 465674450 465674313 7.850000e-52 215
5 TraesCS4D01G207900 chr4D 96.154 130 5 0 3208 3337 348158802 348158673 2.820000e-51 213
6 TraesCS4D01G207900 chr4D 96.094 128 5 0 3208 3335 391290297 391290424 3.650000e-50 209
7 TraesCS4D01G207900 chr4D 95.588 68 2 1 218 285 485473745 485473679 1.370000e-19 108
8 TraesCS4D01G207900 chr4A 95.582 2286 72 14 810 3073 108369311 108371589 0.000000e+00 3635
9 TraesCS4D01G207900 chr4A 93.855 179 7 2 3388 3565 108372191 108372366 2.140000e-67 267
10 TraesCS4D01G207900 chr4A 95.210 167 6 2 3332 3497 108371647 108371812 2.760000e-66 263
11 TraesCS4D01G207900 chr4A 91.228 114 7 1 3493 3606 108372085 108372195 6.240000e-33 152
12 TraesCS4D01G207900 chr4A 87.356 87 9 2 726 812 108368066 108368150 8.250000e-17 99
13 TraesCS4D01G207900 chr4B 92.681 2145 79 30 788 2900 440927368 440925270 0.000000e+00 3020
14 TraesCS4D01G207900 chr4B 94.737 285 14 1 1 285 149063902 149063619 3.310000e-120 442
15 TraesCS4D01G207900 chr3D 97.880 283 6 0 1 283 600107448 600107730 1.160000e-134 490
16 TraesCS4D01G207900 chr3D 95.885 243 8 2 1 242 593127778 593128019 3.380000e-105 392
17 TraesCS4D01G207900 chr6D 96.491 285 10 0 1 285 331202135 331201851 4.220000e-129 472
18 TraesCS4D01G207900 chr6D 96.094 128 5 0 3208 3335 126108262 126108389 3.650000e-50 209
19 TraesCS4D01G207900 chr6D 95.455 66 2 1 218 283 331201791 331201727 1.770000e-18 104
20 TraesCS4D01G207900 chr1A 94.386 285 15 1 1 285 10413245 10412962 1.540000e-118 436
21 TraesCS4D01G207900 chr2A 92.040 201 14 1 74 274 42151376 42151178 7.630000e-72 281
22 TraesCS4D01G207900 chr3B 88.732 213 22 2 6 218 730371992 730371782 3.580000e-65 259
23 TraesCS4D01G207900 chr7B 95.556 135 5 1 3208 3341 84643357 84643491 7.850000e-52 215
24 TraesCS4D01G207900 chr6B 95.455 132 6 0 3207 3338 209249862 209249731 1.020000e-50 211
25 TraesCS4D01G207900 chr5D 94.203 138 6 2 3208 3343 183634084 183633947 3.650000e-50 209
26 TraesCS4D01G207900 chr5D 79.478 268 41 11 1309 1565 498010470 498010206 1.030000e-40 178
27 TraesCS4D01G207900 chr1D 96.094 128 5 0 3208 3335 127143276 127143403 3.650000e-50 209
28 TraesCS4D01G207900 chr2D 93.571 140 6 3 3208 3344 240320224 240320085 4.720000e-49 206
29 TraesCS4D01G207900 chr5A 80.315 254 48 2 1309 1561 622224981 622225233 1.320000e-44 191
30 TraesCS4D01G207900 chr5A 77.778 261 52 5 1309 1566 622145003 622145260 4.830000e-34 156
31 TraesCS4D01G207900 chr5B 79.528 254 50 2 1309 1561 617284603 617284855 2.860000e-41 180


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G207900 chr4D 357528767 357532376 3609 True 3062.5 5598 100.0000 1 3610 2 chr4D.!!$R4 3609
1 TraesCS4D01G207900 chr4A 108368066 108372366 4300 False 883.2 3635 92.6462 726 3606 5 chr4A.!!$F1 2880
2 TraesCS4D01G207900 chr4B 440925270 440927368 2098 True 3020.0 3020 92.6810 788 2900 1 chr4B.!!$R2 2112

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
116 117 0.036765 TTGCCGATTGTAGCTCCGTT 60.037 50.0 0.00 0.00 0.00 4.44 F
131 132 0.042535 CCGTTGTGCACACGTTGTAG 60.043 55.0 27.71 15.67 0.00 2.74 F
184 185 0.094730 GTGGTTGTAGCATTCGCGAC 59.905 55.0 9.15 0.00 45.49 5.19 F
1237 2409 0.110238 GGTGCGTGCTTATGTGTGTG 60.110 55.0 0.00 0.00 0.00 3.82 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1086 2258 0.678048 GCAGAACATTCCTCCGCCTT 60.678 55.000 0.00 0.0 0.00 4.35 R
2082 3264 1.545136 TGACGGTCACCTGCGTAATAA 59.455 47.619 6.76 0.0 0.00 1.40 R
2097 3279 2.618053 GACCTGTAACTCCATTGACGG 58.382 52.381 0.00 0.0 0.00 4.79 R
3196 4406 0.034337 GAGGGAGTACCACGTTTGCA 59.966 55.000 0.00 0.0 43.89 4.08 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.520290 TCATAGTGGCTACAAACTCCG 57.480 47.619 2.02 0.00 0.00 4.63
21 22 2.167693 TCATAGTGGCTACAAACTCCGG 59.832 50.000 2.02 0.00 0.00 5.14
22 23 0.248289 TAGTGGCTACAAACTCCGGC 59.752 55.000 2.02 0.00 0.00 6.13
23 24 1.302192 GTGGCTACAAACTCCGGCA 60.302 57.895 0.00 0.00 0.00 5.69
24 25 0.887387 GTGGCTACAAACTCCGGCAA 60.887 55.000 0.00 0.00 33.62 4.52
25 26 0.179015 TGGCTACAAACTCCGGCAAA 60.179 50.000 0.00 0.00 0.00 3.68
26 27 0.240145 GGCTACAAACTCCGGCAAAC 59.760 55.000 0.00 0.00 0.00 2.93
27 28 1.235724 GCTACAAACTCCGGCAAACT 58.764 50.000 0.00 0.00 0.00 2.66
28 29 1.197036 GCTACAAACTCCGGCAAACTC 59.803 52.381 0.00 0.00 0.00 3.01
29 30 1.459592 CTACAAACTCCGGCAAACTCG 59.540 52.381 0.00 0.00 0.00 4.18
31 32 1.599797 AAACTCCGGCAAACTCGGG 60.600 57.895 0.00 0.00 46.78 5.14
32 33 2.333701 AAACTCCGGCAAACTCGGGT 62.334 55.000 0.00 0.00 46.78 5.28
33 34 2.032071 CTCCGGCAAACTCGGGTT 59.968 61.111 0.00 0.00 46.78 4.11
34 35 2.281208 TCCGGCAAACTCGGGTTG 60.281 61.111 0.00 0.00 46.78 3.77
35 36 4.038080 CCGGCAAACTCGGGTTGC 62.038 66.667 15.64 15.64 43.45 4.17
36 37 3.283684 CGGCAAACTCGGGTTGCA 61.284 61.111 22.45 0.00 35.63 4.08
37 38 2.644992 GGCAAACTCGGGTTGCAG 59.355 61.111 22.45 9.42 35.63 4.41
38 39 2.050077 GCAAACTCGGGTTGCAGC 60.050 61.111 18.10 12.01 35.63 5.25
39 40 2.555547 GCAAACTCGGGTTGCAGCT 61.556 57.895 18.10 0.00 35.63 4.24
40 41 1.576421 CAAACTCGGGTTGCAGCTC 59.424 57.895 0.00 0.00 35.63 4.09
41 42 0.886490 CAAACTCGGGTTGCAGCTCT 60.886 55.000 0.00 0.00 35.63 4.09
42 43 0.886490 AAACTCGGGTTGCAGCTCTG 60.886 55.000 0.00 0.00 35.63 3.35
43 44 1.758440 AACTCGGGTTGCAGCTCTGA 61.758 55.000 0.00 0.00 33.96 3.27
44 45 1.739562 CTCGGGTTGCAGCTCTGAC 60.740 63.158 0.00 0.00 0.00 3.51
45 46 3.114616 CGGGTTGCAGCTCTGACG 61.115 66.667 0.00 0.00 0.00 4.35
46 47 2.343758 GGGTTGCAGCTCTGACGA 59.656 61.111 0.00 0.00 0.00 4.20
47 48 1.301716 GGGTTGCAGCTCTGACGAA 60.302 57.895 0.00 0.00 0.00 3.85
48 49 1.569479 GGGTTGCAGCTCTGACGAAC 61.569 60.000 0.00 0.65 0.00 3.95
49 50 1.488957 GTTGCAGCTCTGACGAACG 59.511 57.895 0.29 0.00 0.00 3.95
50 51 1.067416 TTGCAGCTCTGACGAACGT 59.933 52.632 0.00 0.00 0.00 3.99
51 52 1.215014 TTGCAGCTCTGACGAACGTG 61.215 55.000 4.19 0.00 0.00 4.49
52 53 2.375766 GCAGCTCTGACGAACGTGG 61.376 63.158 4.19 0.00 0.00 4.94
53 54 1.007271 CAGCTCTGACGAACGTGGT 60.007 57.895 4.19 0.00 0.00 4.16
54 55 0.597637 CAGCTCTGACGAACGTGGTT 60.598 55.000 4.19 0.00 0.00 3.67
55 56 0.597637 AGCTCTGACGAACGTGGTTG 60.598 55.000 4.19 0.00 0.00 3.77
56 57 0.874607 GCTCTGACGAACGTGGTTGT 60.875 55.000 4.19 0.00 0.00 3.32
57 58 1.601162 GCTCTGACGAACGTGGTTGTA 60.601 52.381 4.19 0.00 0.00 2.41
58 59 2.316792 CTCTGACGAACGTGGTTGTAG 58.683 52.381 4.19 0.00 0.00 2.74
59 60 0.782384 CTGACGAACGTGGTTGTAGC 59.218 55.000 4.19 0.00 0.00 3.58
60 61 0.386476 TGACGAACGTGGTTGTAGCT 59.614 50.000 4.19 0.00 0.00 3.32
61 62 1.202440 TGACGAACGTGGTTGTAGCTT 60.202 47.619 4.19 0.00 0.00 3.74
62 63 1.862827 GACGAACGTGGTTGTAGCTTT 59.137 47.619 4.19 0.00 0.00 3.51
63 64 2.282407 ACGAACGTGGTTGTAGCTTTT 58.718 42.857 0.00 0.00 0.00 2.27
64 65 2.679336 ACGAACGTGGTTGTAGCTTTTT 59.321 40.909 0.00 0.00 0.00 1.94
82 83 4.436242 TTTTTGTTGAACGGTTGTAGCA 57.564 36.364 0.00 0.00 0.00 3.49
83 84 4.640789 TTTTGTTGAACGGTTGTAGCAT 57.359 36.364 0.00 0.00 0.00 3.79
84 85 4.640789 TTTGTTGAACGGTTGTAGCATT 57.359 36.364 0.00 0.00 0.00 3.56
85 86 4.640789 TTGTTGAACGGTTGTAGCATTT 57.359 36.364 0.00 0.00 0.00 2.32
86 87 3.958704 TGTTGAACGGTTGTAGCATTTG 58.041 40.909 0.00 0.00 0.00 2.32
87 88 3.628032 TGTTGAACGGTTGTAGCATTTGA 59.372 39.130 0.00 0.00 0.00 2.69
88 89 3.889196 TGAACGGTTGTAGCATTTGAC 57.111 42.857 0.00 0.00 0.00 3.18
89 90 2.222213 TGAACGGTTGTAGCATTTGACG 59.778 45.455 0.00 0.00 0.00 4.35
90 91 2.157834 ACGGTTGTAGCATTTGACGA 57.842 45.000 0.00 0.00 0.00 4.20
91 92 1.796459 ACGGTTGTAGCATTTGACGAC 59.204 47.619 0.00 0.00 0.00 4.34
92 93 1.795872 CGGTTGTAGCATTTGACGACA 59.204 47.619 0.00 0.00 32.43 4.35
93 94 2.411031 CGGTTGTAGCATTTGACGACAC 60.411 50.000 0.00 0.00 32.43 3.67
94 95 2.546368 GGTTGTAGCATTTGACGACACA 59.454 45.455 0.00 0.00 32.43 3.72
95 96 3.541711 GTTGTAGCATTTGACGACACAC 58.458 45.455 0.00 0.00 31.33 3.82
105 106 3.240203 CGACACACGTTGCCGATT 58.760 55.556 0.00 0.00 37.88 3.34
106 107 1.154672 CGACACACGTTGCCGATTG 60.155 57.895 0.00 0.00 37.88 2.67
107 108 1.827315 CGACACACGTTGCCGATTGT 61.827 55.000 0.00 0.00 36.03 2.71
108 109 1.141645 GACACACGTTGCCGATTGTA 58.858 50.000 0.00 0.00 34.38 2.41
109 110 1.126113 GACACACGTTGCCGATTGTAG 59.874 52.381 0.00 0.00 34.38 2.74
110 111 0.179225 CACACGTTGCCGATTGTAGC 60.179 55.000 0.00 0.00 37.88 3.58
111 112 0.320421 ACACGTTGCCGATTGTAGCT 60.320 50.000 0.00 0.00 37.88 3.32
112 113 0.370273 CACGTTGCCGATTGTAGCTC 59.630 55.000 0.00 0.00 37.88 4.09
113 114 0.739813 ACGTTGCCGATTGTAGCTCC 60.740 55.000 0.00 0.00 37.88 4.70
114 115 1.752501 CGTTGCCGATTGTAGCTCCG 61.753 60.000 0.00 0.00 35.63 4.63
115 116 0.739813 GTTGCCGATTGTAGCTCCGT 60.740 55.000 0.00 0.00 0.00 4.69
116 117 0.036765 TTGCCGATTGTAGCTCCGTT 60.037 50.000 0.00 0.00 0.00 4.44
117 118 0.739462 TGCCGATTGTAGCTCCGTTG 60.739 55.000 0.00 0.00 0.00 4.10
118 119 0.739813 GCCGATTGTAGCTCCGTTGT 60.740 55.000 0.00 0.00 0.00 3.32
119 120 0.999406 CCGATTGTAGCTCCGTTGTG 59.001 55.000 0.00 0.00 0.00 3.33
120 121 0.370273 CGATTGTAGCTCCGTTGTGC 59.630 55.000 0.00 0.00 0.00 4.57
121 122 1.438651 GATTGTAGCTCCGTTGTGCA 58.561 50.000 0.00 0.00 33.44 4.57
122 123 1.128692 GATTGTAGCTCCGTTGTGCAC 59.871 52.381 10.75 10.75 33.44 4.57
123 124 0.179070 TTGTAGCTCCGTTGTGCACA 60.179 50.000 17.42 17.42 33.44 4.57
124 125 0.878523 TGTAGCTCCGTTGTGCACAC 60.879 55.000 21.56 13.79 33.44 3.82
125 126 1.663388 TAGCTCCGTTGTGCACACG 60.663 57.895 21.56 23.89 33.44 4.49
126 127 2.358193 TAGCTCCGTTGTGCACACGT 62.358 55.000 27.71 17.80 33.44 4.49
127 128 2.819552 GCTCCGTTGTGCACACGTT 61.820 57.895 27.71 0.00 0.00 3.99
128 129 1.011242 CTCCGTTGTGCACACGTTG 60.011 57.895 27.71 19.92 0.00 4.10
129 130 1.701545 CTCCGTTGTGCACACGTTGT 61.702 55.000 27.71 0.00 0.00 3.32
130 131 0.459759 TCCGTTGTGCACACGTTGTA 60.460 50.000 27.71 10.88 0.00 2.41
131 132 0.042535 CCGTTGTGCACACGTTGTAG 60.043 55.000 27.71 15.67 0.00 2.74
132 133 0.653323 CGTTGTGCACACGTTGTAGC 60.653 55.000 21.56 0.00 0.00 3.58
133 134 0.375454 GTTGTGCACACGTTGTAGCA 59.625 50.000 21.56 0.00 34.04 3.49
134 135 1.002900 GTTGTGCACACGTTGTAGCAT 60.003 47.619 21.56 0.00 37.00 3.79
135 136 0.865111 TGTGCACACGTTGTAGCATC 59.135 50.000 17.42 0.00 37.00 3.91
136 137 1.148310 GTGCACACGTTGTAGCATCT 58.852 50.000 13.17 0.00 37.00 2.90
137 138 1.531149 GTGCACACGTTGTAGCATCTT 59.469 47.619 13.17 0.00 37.00 2.40
138 139 2.032030 GTGCACACGTTGTAGCATCTTT 60.032 45.455 13.17 0.00 37.00 2.52
139 140 2.032117 TGCACACGTTGTAGCATCTTTG 60.032 45.455 0.00 0.00 32.45 2.77
154 155 3.837213 TCTTTGCAAGCTGATTGTAGC 57.163 42.857 7.54 0.00 44.01 3.58
155 156 7.615455 GCATCTTTGCAAGCTGATTGTAGCT 62.615 44.000 7.54 0.00 46.75 3.32
164 165 4.342352 GCTGATTGTAGCTTTGTGGTAC 57.658 45.455 0.00 0.00 46.54 3.34
169 170 2.159327 GTAGCTTTGTGGTACGTGGT 57.841 50.000 0.00 0.00 39.42 4.16
170 171 2.486918 GTAGCTTTGTGGTACGTGGTT 58.513 47.619 0.00 0.00 39.42 3.67
171 172 1.305201 AGCTTTGTGGTACGTGGTTG 58.695 50.000 0.00 0.00 0.00 3.77
172 173 1.018910 GCTTTGTGGTACGTGGTTGT 58.981 50.000 0.00 0.00 0.00 3.32
173 174 2.158928 AGCTTTGTGGTACGTGGTTGTA 60.159 45.455 0.00 0.00 0.00 2.41
174 175 2.222445 GCTTTGTGGTACGTGGTTGTAG 59.778 50.000 0.00 0.00 0.00 2.74
175 176 1.868469 TTGTGGTACGTGGTTGTAGC 58.132 50.000 0.00 0.00 41.88 3.58
178 179 2.843401 TGGTACGTGGTTGTAGCATT 57.157 45.000 0.00 0.00 45.09 3.56
179 180 2.690786 TGGTACGTGGTTGTAGCATTC 58.309 47.619 0.00 0.00 45.09 2.67
180 181 1.657094 GGTACGTGGTTGTAGCATTCG 59.343 52.381 0.00 0.00 41.33 3.34
181 182 1.060122 GTACGTGGTTGTAGCATTCGC 59.940 52.381 0.00 0.00 38.99 4.70
182 183 1.058748 CGTGGTTGTAGCATTCGCG 59.941 57.895 0.00 0.00 45.49 5.87
183 184 1.348538 CGTGGTTGTAGCATTCGCGA 61.349 55.000 3.71 3.71 45.49 5.87
184 185 0.094730 GTGGTTGTAGCATTCGCGAC 59.905 55.000 9.15 0.00 45.49 5.19
188 189 4.178861 GTAGCATTCGCGACACCA 57.821 55.556 9.15 0.00 42.72 4.17
189 190 2.677971 GTAGCATTCGCGACACCAT 58.322 52.632 9.15 0.00 42.72 3.55
190 191 0.577269 GTAGCATTCGCGACACCATC 59.423 55.000 9.15 0.00 42.72 3.51
203 204 4.208632 CCATCGTTGGCAGGTCTC 57.791 61.111 0.00 0.00 35.85 3.36
204 205 1.450312 CCATCGTTGGCAGGTCTCC 60.450 63.158 0.00 0.00 35.85 3.71
205 206 1.450312 CATCGTTGGCAGGTCTCCC 60.450 63.158 0.00 0.00 0.00 4.30
206 207 3.019003 ATCGTTGGCAGGTCTCCCG 62.019 63.158 0.00 0.00 35.12 5.14
207 208 4.003788 CGTTGGCAGGTCTCCCGT 62.004 66.667 0.00 0.00 35.12 5.28
208 209 2.358737 GTTGGCAGGTCTCCCGTG 60.359 66.667 0.00 0.00 35.12 4.94
209 210 4.329545 TTGGCAGGTCTCCCGTGC 62.330 66.667 0.00 0.00 35.43 5.34
211 212 4.767255 GGCAGGTCTCCCGTGCAG 62.767 72.222 8.94 0.00 36.91 4.41
213 214 4.007644 CAGGTCTCCCGTGCAGCA 62.008 66.667 0.00 0.00 35.12 4.41
214 215 3.241530 AGGTCTCCCGTGCAGCAA 61.242 61.111 0.00 0.00 35.12 3.91
215 216 3.050275 GGTCTCCCGTGCAGCAAC 61.050 66.667 0.00 0.00 0.00 4.17
216 217 3.050275 GTCTCCCGTGCAGCAACC 61.050 66.667 0.00 0.00 0.00 3.77
217 218 3.241530 TCTCCCGTGCAGCAACCT 61.242 61.111 0.00 0.00 0.00 3.50
218 219 1.911269 TCTCCCGTGCAGCAACCTA 60.911 57.895 0.00 0.00 0.00 3.08
219 220 1.003839 CTCCCGTGCAGCAACCTAA 60.004 57.895 0.00 0.00 0.00 2.69
220 221 0.392998 CTCCCGTGCAGCAACCTAAT 60.393 55.000 0.00 0.00 0.00 1.73
221 222 0.676466 TCCCGTGCAGCAACCTAATG 60.676 55.000 0.00 0.00 0.00 1.90
222 223 1.656818 CCCGTGCAGCAACCTAATGG 61.657 60.000 0.00 0.00 39.83 3.16
223 224 1.656818 CCGTGCAGCAACCTAATGGG 61.657 60.000 0.00 0.00 41.89 4.00
224 225 1.656818 CGTGCAGCAACCTAATGGGG 61.657 60.000 0.00 0.00 40.03 4.96
225 226 0.611896 GTGCAGCAACCTAATGGGGT 60.612 55.000 0.00 0.00 42.05 4.95
226 227 0.323360 TGCAGCAACCTAATGGGGTC 60.323 55.000 0.00 0.00 38.87 4.46
227 228 1.037579 GCAGCAACCTAATGGGGTCC 61.038 60.000 0.00 0.00 38.87 4.46
228 229 0.748005 CAGCAACCTAATGGGGTCCG 60.748 60.000 0.00 0.00 38.87 4.79
229 230 2.119029 GCAACCTAATGGGGTCCGC 61.119 63.158 0.00 0.00 38.87 5.54
230 231 1.453197 CAACCTAATGGGGTCCGCC 60.453 63.158 3.03 0.00 38.87 6.13
231 232 3.038945 AACCTAATGGGGTCCGCCG 62.039 63.158 3.03 0.00 38.87 6.46
232 233 4.250305 CCTAATGGGGTCCGCCGG 62.250 72.222 0.00 0.00 34.97 6.13
233 234 3.476419 CTAATGGGGTCCGCCGGT 61.476 66.667 1.63 0.00 34.97 5.28
234 235 3.750373 CTAATGGGGTCCGCCGGTG 62.750 68.421 8.42 8.42 34.97 4.94
597 598 2.627771 AGGTTGTGTGGTGGAAGGA 58.372 52.632 0.00 0.00 0.00 3.36
598 599 0.923358 AGGTTGTGTGGTGGAAGGAA 59.077 50.000 0.00 0.00 0.00 3.36
599 600 1.133792 AGGTTGTGTGGTGGAAGGAAG 60.134 52.381 0.00 0.00 0.00 3.46
600 601 1.133915 GGTTGTGTGGTGGAAGGAAGA 60.134 52.381 0.00 0.00 0.00 2.87
601 602 2.650322 GTTGTGTGGTGGAAGGAAGAA 58.350 47.619 0.00 0.00 0.00 2.52
602 603 2.618709 GTTGTGTGGTGGAAGGAAGAAG 59.381 50.000 0.00 0.00 0.00 2.85
603 604 2.123589 TGTGTGGTGGAAGGAAGAAGA 58.876 47.619 0.00 0.00 0.00 2.87
604 605 2.507886 TGTGTGGTGGAAGGAAGAAGAA 59.492 45.455 0.00 0.00 0.00 2.52
605 606 3.142174 GTGTGGTGGAAGGAAGAAGAAG 58.858 50.000 0.00 0.00 0.00 2.85
606 607 2.106511 TGTGGTGGAAGGAAGAAGAAGG 59.893 50.000 0.00 0.00 0.00 3.46
607 608 1.073923 TGGTGGAAGGAAGAAGAAGGC 59.926 52.381 0.00 0.00 0.00 4.35
608 609 1.073923 GGTGGAAGGAAGAAGAAGGCA 59.926 52.381 0.00 0.00 0.00 4.75
609 610 2.489073 GGTGGAAGGAAGAAGAAGGCAA 60.489 50.000 0.00 0.00 0.00 4.52
610 611 3.222603 GTGGAAGGAAGAAGAAGGCAAA 58.777 45.455 0.00 0.00 0.00 3.68
611 612 3.636764 GTGGAAGGAAGAAGAAGGCAAAA 59.363 43.478 0.00 0.00 0.00 2.44
612 613 3.891366 TGGAAGGAAGAAGAAGGCAAAAG 59.109 43.478 0.00 0.00 0.00 2.27
613 614 3.256879 GGAAGGAAGAAGAAGGCAAAAGG 59.743 47.826 0.00 0.00 0.00 3.11
614 615 3.884037 AGGAAGAAGAAGGCAAAAGGA 57.116 42.857 0.00 0.00 0.00 3.36
615 616 4.184649 AGGAAGAAGAAGGCAAAAGGAA 57.815 40.909 0.00 0.00 0.00 3.36
616 617 4.546674 AGGAAGAAGAAGGCAAAAGGAAA 58.453 39.130 0.00 0.00 0.00 3.13
617 618 4.962362 AGGAAGAAGAAGGCAAAAGGAAAA 59.038 37.500 0.00 0.00 0.00 2.29
618 619 5.425217 AGGAAGAAGAAGGCAAAAGGAAAAA 59.575 36.000 0.00 0.00 0.00 1.94
637 638 1.226746 AAAACTGGAAGAAGGACGCG 58.773 50.000 3.53 3.53 37.43 6.01
638 639 1.228657 AAACTGGAAGAAGGACGCGC 61.229 55.000 5.73 0.00 37.43 6.86
639 640 3.181967 CTGGAAGAAGGACGCGCG 61.182 66.667 30.96 30.96 34.07 6.86
640 641 3.626680 CTGGAAGAAGGACGCGCGA 62.627 63.158 39.36 8.81 34.07 5.87
641 642 2.881352 GGAAGAAGGACGCGCGAG 60.881 66.667 39.36 10.29 0.00 5.03
642 643 2.178521 GAAGAAGGACGCGCGAGA 59.821 61.111 39.36 0.00 0.00 4.04
643 644 2.126424 AAGAAGGACGCGCGAGAC 60.126 61.111 39.36 24.48 0.00 3.36
644 645 2.797866 GAAGAAGGACGCGCGAGACA 62.798 60.000 39.36 0.00 0.00 3.41
645 646 2.804368 AAGAAGGACGCGCGAGACAG 62.804 60.000 39.36 6.47 0.00 3.51
646 647 4.421479 AAGGACGCGCGAGACAGG 62.421 66.667 39.36 5.57 0.00 4.00
653 654 4.933064 CGCGAGACAGGCCGGATC 62.933 72.222 10.86 6.34 0.00 3.36
654 655 4.593864 GCGAGACAGGCCGGATCC 62.594 72.222 10.86 0.00 0.00 3.36
655 656 3.147595 CGAGACAGGCCGGATCCA 61.148 66.667 10.86 0.00 0.00 3.41
656 657 2.502492 CGAGACAGGCCGGATCCAT 61.502 63.158 10.86 0.00 0.00 3.41
657 658 1.070445 GAGACAGGCCGGATCCATG 59.930 63.158 10.86 7.11 0.00 3.66
658 659 1.690219 GAGACAGGCCGGATCCATGT 61.690 60.000 10.86 10.40 0.00 3.21
659 660 1.524621 GACAGGCCGGATCCATGTG 60.525 63.158 10.86 5.73 0.00 3.21
660 661 2.203252 CAGGCCGGATCCATGTGG 60.203 66.667 13.41 5.76 0.00 4.17
669 670 4.513519 TCCATGTGGATCGAACGC 57.486 55.556 0.00 0.00 39.78 4.84
670 671 1.518352 TCCATGTGGATCGAACGCG 60.518 57.895 3.53 3.53 39.78 6.01
671 672 2.321060 CATGTGGATCGAACGCGC 59.679 61.111 5.73 0.00 37.46 6.86
672 673 3.254654 ATGTGGATCGAACGCGCG 61.255 61.111 30.96 30.96 37.46 6.86
690 691 3.554692 CGATGCGACTGGCCGAAC 61.555 66.667 0.00 0.00 42.61 3.95
691 692 3.554692 GATGCGACTGGCCGAACG 61.555 66.667 0.00 4.44 42.61 3.95
692 693 4.373116 ATGCGACTGGCCGAACGT 62.373 61.111 14.60 2.31 42.61 3.99
693 694 3.876589 ATGCGACTGGCCGAACGTT 62.877 57.895 0.00 0.00 42.61 3.99
694 695 3.343421 GCGACTGGCCGAACGTTT 61.343 61.111 0.46 0.00 34.80 3.60
695 696 2.851104 CGACTGGCCGAACGTTTC 59.149 61.111 0.46 0.00 0.00 2.78
704 705 4.379143 GAACGTTTCGGCCGGTGC 62.379 66.667 27.83 10.23 0.00 5.01
716 717 4.439472 CGGTGCGCTGGCGTAAAC 62.439 66.667 16.21 11.69 44.10 2.01
717 718 4.097863 GGTGCGCTGGCGTAAACC 62.098 66.667 16.21 16.11 44.10 3.27
718 719 4.439472 GTGCGCTGGCGTAAACCG 62.439 66.667 16.21 0.00 44.10 4.44
719 720 4.973055 TGCGCTGGCGTAAACCGT 62.973 61.111 16.21 0.00 44.10 4.83
720 721 3.719144 GCGCTGGCGTAAACCGTT 61.719 61.111 16.21 0.00 42.09 4.44
721 722 2.940561 CGCTGGCGTAAACCGTTT 59.059 55.556 6.83 1.40 39.32 3.60
722 723 1.899521 GCGCTGGCGTAAACCGTTTA 61.900 55.000 16.21 0.00 42.09 2.01
723 724 0.179243 CGCTGGCGTAAACCGTTTAC 60.179 55.000 19.99 19.99 41.56 2.01
724 725 0.166597 GCTGGCGTAAACCGTTTACC 59.833 55.000 22.66 16.59 41.87 2.85
729 730 5.078411 TGGCGTAAACCGTTTACCTTATA 57.922 39.130 22.66 7.51 41.87 0.98
762 763 5.358160 GTCTCACCCCAATGAAATTTAGAGG 59.642 44.000 0.00 0.00 31.22 3.69
763 764 4.609301 TCACCCCAATGAAATTTAGAGGG 58.391 43.478 9.42 9.42 35.99 4.30
764 765 4.293634 TCACCCCAATGAAATTTAGAGGGA 59.706 41.667 15.41 0.00 37.88 4.20
768 769 4.218312 CCAATGAAATTTAGAGGGAGGGG 58.782 47.826 0.00 0.00 31.22 4.79
769 770 4.326132 CCAATGAAATTTAGAGGGAGGGGT 60.326 45.833 0.00 0.00 31.22 4.95
771 772 3.265489 TGAAATTTAGAGGGAGGGGTGT 58.735 45.455 0.00 0.00 0.00 4.16
773 774 2.361085 ATTTAGAGGGAGGGGTGTGT 57.639 50.000 0.00 0.00 0.00 3.72
775 776 0.192566 TTAGAGGGAGGGGTGTGTGT 59.807 55.000 0.00 0.00 0.00 3.72
777 778 2.039831 AGGGAGGGGTGTGTGTGT 60.040 61.111 0.00 0.00 0.00 3.72
778 779 2.113139 GGGAGGGGTGTGTGTGTG 59.887 66.667 0.00 0.00 0.00 3.82
779 780 2.752807 GGGAGGGGTGTGTGTGTGT 61.753 63.158 0.00 0.00 0.00 3.72
791 792 6.404954 GGGTGTGTGTGTGTGTTAAAACTTAT 60.405 38.462 0.00 0.00 0.00 1.73
830 1994 5.710409 TTTAGGATTAGTGAAAGGGGAGG 57.290 43.478 0.00 0.00 0.00 4.30
985 2154 5.997746 TCTCCAATACACAAGAAGGTTTCTG 59.002 40.000 0.00 0.00 40.59 3.02
986 2155 5.690865 TCCAATACACAAGAAGGTTTCTGT 58.309 37.500 0.00 0.00 40.59 3.41
987 2156 5.763204 TCCAATACACAAGAAGGTTTCTGTC 59.237 40.000 0.00 0.00 40.59 3.51
1020 2189 2.176546 GCTTTCGCGCTCAATGCA 59.823 55.556 16.93 0.00 43.06 3.96
1086 2258 0.179076 CAGCAGCGGTGATGATACCA 60.179 55.000 27.47 0.00 43.13 3.25
1115 2287 4.922206 AGGAATGTTCTGCCTGTCATTAA 58.078 39.130 0.00 0.00 31.87 1.40
1234 2406 0.874390 CAAGGTGCGTGCTTATGTGT 59.126 50.000 0.00 0.00 0.00 3.72
1237 2409 0.110238 GGTGCGTGCTTATGTGTGTG 60.110 55.000 0.00 0.00 0.00 3.82
1411 2589 2.094659 CGCCGACGTCATTGAGCTT 61.095 57.895 17.16 0.00 33.53 3.74
1680 2858 0.611618 TTTGGCATGCAGGTACAGGG 60.612 55.000 21.36 0.00 0.00 4.45
2041 3219 0.455815 GCAATCCACCCCGTTCATTC 59.544 55.000 0.00 0.00 0.00 2.67
2042 3220 0.732571 CAATCCACCCCGTTCATTCG 59.267 55.000 0.00 0.00 0.00 3.34
2082 3264 4.074970 CACTGCATTCTCCAACTTAACCT 58.925 43.478 0.00 0.00 0.00 3.50
2097 3279 5.173664 ACTTAACCTTATTACGCAGGTGAC 58.826 41.667 0.00 0.00 43.05 3.67
2137 3319 1.018910 CCCGTGAAAACGTGAACCTT 58.981 50.000 0.00 0.00 0.00 3.50
2196 3380 8.928733 GGTACGTATGTAATTTGAAAGAAGACA 58.071 33.333 0.00 0.00 30.94 3.41
2271 3464 7.099764 GTGATCTAGTGTCCAAGAAATGAAGA 58.900 38.462 0.00 0.00 0.00 2.87
2272 3465 7.277539 GTGATCTAGTGTCCAAGAAATGAAGAG 59.722 40.741 0.00 0.00 0.00 2.85
2303 3496 4.440880 GCTGCTCAGTAATTCTCAGTCAT 58.559 43.478 0.00 0.00 0.00 3.06
2308 3501 5.871524 GCTCAGTAATTCTCAGTCATTGACA 59.128 40.000 18.57 0.00 34.60 3.58
2481 3676 1.618487 TGCACATGGACAGATTGCAA 58.382 45.000 0.00 0.00 40.15 4.08
2635 3830 2.144952 TGTGGATGGACACAGCACT 58.855 52.632 0.00 0.00 45.70 4.40
2903 4109 4.778579 ACAAGATGTGCTCATGCTTATCT 58.221 39.130 5.89 0.00 41.03 1.98
3000 4207 5.552870 ACAATCGAGGGCAATAGTTAGAT 57.447 39.130 0.00 0.00 0.00 1.98
3002 4209 6.456501 ACAATCGAGGGCAATAGTTAGATAC 58.543 40.000 0.00 0.00 0.00 2.24
3025 4232 7.016153 ACTGTTGTTCACCTATTTCATCCTA 57.984 36.000 0.00 0.00 0.00 2.94
3028 4235 5.367945 TGTTCACCTATTTCATCCTACCC 57.632 43.478 0.00 0.00 0.00 3.69
3029 4236 4.785914 TGTTCACCTATTTCATCCTACCCA 59.214 41.667 0.00 0.00 0.00 4.51
3030 4237 5.251932 TGTTCACCTATTTCATCCTACCCAA 59.748 40.000 0.00 0.00 0.00 4.12
3032 4239 5.036916 TCACCTATTTCATCCTACCCAACT 58.963 41.667 0.00 0.00 0.00 3.16
3033 4240 5.130477 TCACCTATTTCATCCTACCCAACTC 59.870 44.000 0.00 0.00 0.00 3.01
3034 4241 4.412528 ACCTATTTCATCCTACCCAACTCC 59.587 45.833 0.00 0.00 0.00 3.85
3037 4244 2.661176 TCATCCTACCCAACTCCCTT 57.339 50.000 0.00 0.00 0.00 3.95
3038 4245 2.478292 TCATCCTACCCAACTCCCTTC 58.522 52.381 0.00 0.00 0.00 3.46
3055 4265 2.347452 CCTTCGCCAATTGTACTACACG 59.653 50.000 4.43 0.00 0.00 4.49
3073 4283 1.687123 ACGGGCGCTTAACTATCATCT 59.313 47.619 7.64 0.00 0.00 2.90
3074 4284 2.889045 ACGGGCGCTTAACTATCATCTA 59.111 45.455 7.64 0.00 0.00 1.98
3075 4285 3.510360 ACGGGCGCTTAACTATCATCTAT 59.490 43.478 7.64 0.00 0.00 1.98
3076 4286 3.859961 CGGGCGCTTAACTATCATCTATG 59.140 47.826 7.64 0.00 0.00 2.23
3077 4287 4.618460 CGGGCGCTTAACTATCATCTATGT 60.618 45.833 7.64 0.00 0.00 2.29
3078 4288 5.238583 GGGCGCTTAACTATCATCTATGTT 58.761 41.667 7.64 0.00 0.00 2.71
3079 4289 5.701290 GGGCGCTTAACTATCATCTATGTTT 59.299 40.000 7.64 0.00 0.00 2.83
3080 4290 6.872020 GGGCGCTTAACTATCATCTATGTTTA 59.128 38.462 7.64 0.00 0.00 2.01
3081 4291 7.386848 GGGCGCTTAACTATCATCTATGTTTAA 59.613 37.037 7.64 0.00 0.00 1.52
3082 4292 8.936864 GGCGCTTAACTATCATCTATGTTTAAT 58.063 33.333 7.64 0.00 0.00 1.40
3093 4303 8.642908 TCATCTATGTTTAATACACGGAACTG 57.357 34.615 0.00 0.00 40.19 3.16
3094 4304 6.897259 TCTATGTTTAATACACGGAACTGC 57.103 37.500 0.00 0.00 40.19 4.40
3095 4305 6.399743 TCTATGTTTAATACACGGAACTGCA 58.600 36.000 0.00 0.00 40.19 4.41
3096 4306 5.950758 ATGTTTAATACACGGAACTGCAA 57.049 34.783 0.00 0.00 40.19 4.08
3097 4307 5.098218 TGTTTAATACACGGAACTGCAAC 57.902 39.130 0.00 0.00 0.00 4.17
3098 4308 4.023878 TGTTTAATACACGGAACTGCAACC 60.024 41.667 0.00 0.00 0.00 3.77
3162 4372 9.948964 TTATCATGGATAGATTATTGTGAGTGG 57.051 33.333 0.00 0.00 0.00 4.00
3163 4373 6.772605 TCATGGATAGATTATTGTGAGTGGG 58.227 40.000 0.00 0.00 0.00 4.61
3164 4374 6.558394 TCATGGATAGATTATTGTGAGTGGGA 59.442 38.462 0.00 0.00 0.00 4.37
3165 4375 6.174720 TGGATAGATTATTGTGAGTGGGAC 57.825 41.667 0.00 0.00 0.00 4.46
3166 4376 5.665360 TGGATAGATTATTGTGAGTGGGACA 59.335 40.000 0.00 0.00 0.00 4.02
3167 4377 6.157820 TGGATAGATTATTGTGAGTGGGACAA 59.842 38.462 0.00 0.00 44.16 3.18
3168 4378 6.483640 GGATAGATTATTGTGAGTGGGACAAC 59.516 42.308 0.00 0.00 44.16 3.32
3169 4379 5.241403 AGATTATTGTGAGTGGGACAACA 57.759 39.130 0.00 0.00 44.16 3.33
3170 4380 5.819991 AGATTATTGTGAGTGGGACAACAT 58.180 37.500 0.00 0.00 44.16 2.71
3171 4381 6.957631 AGATTATTGTGAGTGGGACAACATA 58.042 36.000 0.00 0.00 44.16 2.29
3172 4382 7.050377 AGATTATTGTGAGTGGGACAACATAG 58.950 38.462 0.00 0.00 44.16 2.23
3173 4383 3.417069 TTGTGAGTGGGACAACATAGG 57.583 47.619 0.00 0.00 44.16 2.57
3174 4384 2.334977 TGTGAGTGGGACAACATAGGT 58.665 47.619 0.00 0.00 44.16 3.08
3175 4385 2.038426 TGTGAGTGGGACAACATAGGTG 59.962 50.000 0.00 0.00 44.16 4.00
3176 4386 1.003118 TGAGTGGGACAACATAGGTGC 59.997 52.381 0.00 0.00 44.16 5.01
3177 4387 1.279271 GAGTGGGACAACATAGGTGCT 59.721 52.381 0.00 0.00 44.16 4.40
3178 4388 1.003580 AGTGGGACAACATAGGTGCTG 59.996 52.381 0.00 0.00 44.16 4.41
3179 4389 1.064003 TGGGACAACATAGGTGCTGT 58.936 50.000 0.00 0.00 37.36 4.40
3180 4390 1.003118 TGGGACAACATAGGTGCTGTC 59.997 52.381 4.18 4.18 46.03 3.51
3182 4392 1.359848 GACAACATAGGTGCTGTCCG 58.640 55.000 1.71 0.00 42.75 4.79
3183 4393 0.036388 ACAACATAGGTGCTGTCCGG 60.036 55.000 0.00 0.00 28.85 5.14
3184 4394 1.078426 AACATAGGTGCTGTCCGGC 60.078 57.895 0.00 0.00 0.00 6.13
3185 4395 1.836999 AACATAGGTGCTGTCCGGCA 61.837 55.000 0.00 0.00 40.15 5.69
3186 4396 1.078497 CATAGGTGCTGTCCGGCAA 60.078 57.895 1.66 0.00 44.18 4.52
3187 4397 1.091771 CATAGGTGCTGTCCGGCAAG 61.092 60.000 1.66 0.00 44.18 4.01
3188 4398 2.257409 ATAGGTGCTGTCCGGCAAGG 62.257 60.000 1.66 0.00 44.18 3.61
3189 4399 4.643387 GGTGCTGTCCGGCAAGGT 62.643 66.667 1.66 0.00 44.18 3.50
3190 4400 2.594592 GTGCTGTCCGGCAAGGTT 60.595 61.111 1.66 0.00 44.18 3.50
3191 4401 2.193536 GTGCTGTCCGGCAAGGTTT 61.194 57.895 1.66 0.00 44.18 3.27
3192 4402 2.192861 TGCTGTCCGGCAAGGTTTG 61.193 57.895 0.00 0.00 39.43 2.93
3193 4403 2.193536 GCTGTCCGGCAAGGTTTGT 61.194 57.895 0.00 0.00 41.99 2.83
3194 4404 1.654220 CTGTCCGGCAAGGTTTGTG 59.346 57.895 0.00 0.00 41.99 3.33
3195 4405 1.077357 TGTCCGGCAAGGTTTGTGT 60.077 52.632 0.00 0.00 41.99 3.72
3196 4406 0.681564 TGTCCGGCAAGGTTTGTGTT 60.682 50.000 0.00 0.00 41.99 3.32
3197 4407 0.248866 GTCCGGCAAGGTTTGTGTTG 60.249 55.000 0.00 0.00 41.99 3.33
3198 4408 1.591327 CCGGCAAGGTTTGTGTTGC 60.591 57.895 0.00 0.00 46.88 4.17
3213 4423 0.589708 GTTGCAAACGTGGTACTCCC 59.410 55.000 0.00 0.00 36.92 4.30
3214 4424 0.470766 TTGCAAACGTGGTACTCCCT 59.529 50.000 0.00 0.00 0.00 4.20
3215 4425 0.034337 TGCAAACGTGGTACTCCCTC 59.966 55.000 0.00 0.00 0.00 4.30
3216 4426 0.672711 GCAAACGTGGTACTCCCTCC 60.673 60.000 0.00 0.00 0.00 4.30
3217 4427 0.389426 CAAACGTGGTACTCCCTCCG 60.389 60.000 0.00 0.00 35.32 4.63
3218 4428 0.829182 AAACGTGGTACTCCCTCCGT 60.829 55.000 0.00 0.00 41.29 4.69
3219 4429 1.246737 AACGTGGTACTCCCTCCGTC 61.247 60.000 0.00 0.00 39.51 4.79
3220 4430 2.413142 CGTGGTACTCCCTCCGTCC 61.413 68.421 0.00 0.00 0.00 4.79
3221 4431 2.056815 GTGGTACTCCCTCCGTCCC 61.057 68.421 0.00 0.00 0.00 4.46
3222 4432 2.361771 GGTACTCCCTCCGTCCCA 59.638 66.667 0.00 0.00 0.00 4.37
3223 4433 1.305549 GGTACTCCCTCCGTCCCAA 60.306 63.158 0.00 0.00 0.00 4.12
3224 4434 0.906282 GGTACTCCCTCCGTCCCAAA 60.906 60.000 0.00 0.00 0.00 3.28
3225 4435 0.978907 GTACTCCCTCCGTCCCAAAA 59.021 55.000 0.00 0.00 0.00 2.44
3226 4436 1.558294 GTACTCCCTCCGTCCCAAAAT 59.442 52.381 0.00 0.00 0.00 1.82
3227 4437 1.073098 ACTCCCTCCGTCCCAAAATT 58.927 50.000 0.00 0.00 0.00 1.82
3228 4438 1.004394 ACTCCCTCCGTCCCAAAATTC 59.996 52.381 0.00 0.00 0.00 2.17
3229 4439 1.282157 CTCCCTCCGTCCCAAAATTCT 59.718 52.381 0.00 0.00 0.00 2.40
3230 4440 1.708551 TCCCTCCGTCCCAAAATTCTT 59.291 47.619 0.00 0.00 0.00 2.52
3231 4441 1.818674 CCCTCCGTCCCAAAATTCTTG 59.181 52.381 0.00 0.00 0.00 3.02
3232 4442 2.514803 CCTCCGTCCCAAAATTCTTGT 58.485 47.619 0.00 0.00 0.00 3.16
3233 4443 2.488153 CCTCCGTCCCAAAATTCTTGTC 59.512 50.000 0.00 0.00 0.00 3.18
3234 4444 3.412386 CTCCGTCCCAAAATTCTTGTCT 58.588 45.455 0.00 0.00 0.00 3.41
3235 4445 3.821033 CTCCGTCCCAAAATTCTTGTCTT 59.179 43.478 0.00 0.00 0.00 3.01
3236 4446 4.975631 TCCGTCCCAAAATTCTTGTCTTA 58.024 39.130 0.00 0.00 0.00 2.10
3237 4447 5.378332 TCCGTCCCAAAATTCTTGTCTTAA 58.622 37.500 0.00 0.00 0.00 1.85
3238 4448 5.828859 TCCGTCCCAAAATTCTTGTCTTAAA 59.171 36.000 0.00 0.00 0.00 1.52
3239 4449 6.492087 TCCGTCCCAAAATTCTTGTCTTAAAT 59.508 34.615 0.00 0.00 0.00 1.40
3240 4450 7.014808 TCCGTCCCAAAATTCTTGTCTTAAATT 59.985 33.333 0.00 0.00 0.00 1.82
3241 4451 7.655732 CCGTCCCAAAATTCTTGTCTTAAATTT 59.344 33.333 0.00 0.00 34.86 1.82
3242 4452 8.487176 CGTCCCAAAATTCTTGTCTTAAATTTG 58.513 33.333 0.00 0.00 33.95 2.32
3243 4453 9.325198 GTCCCAAAATTCTTGTCTTAAATTTGT 57.675 29.630 0.00 0.00 33.95 2.83
3244 4454 9.541143 TCCCAAAATTCTTGTCTTAAATTTGTC 57.459 29.630 0.00 0.00 33.95 3.18
3245 4455 9.546428 CCCAAAATTCTTGTCTTAAATTTGTCT 57.454 29.630 0.00 0.00 33.95 3.41
3253 4463 9.146984 TCTTGTCTTAAATTTGTCTACATACGG 57.853 33.333 0.00 0.00 0.00 4.02
3254 4464 9.146984 CTTGTCTTAAATTTGTCTACATACGGA 57.853 33.333 0.00 0.00 0.00 4.69
3255 4465 9.661563 TTGTCTTAAATTTGTCTACATACGGAT 57.338 29.630 0.00 0.00 0.00 4.18
3256 4466 9.093970 TGTCTTAAATTTGTCTACATACGGATG 57.906 33.333 5.94 5.94 39.16 3.51
3266 4476 8.857694 TGTCTACATACGGATGTATCTATTCA 57.142 34.615 20.64 10.60 45.42 2.57
3267 4477 9.462606 TGTCTACATACGGATGTATCTATTCAT 57.537 33.333 20.64 0.00 45.42 2.57
3325 4535 7.611213 ATGTAAGACAAGAATTTTAGGACGG 57.389 36.000 0.00 0.00 0.00 4.79
3326 4536 6.761312 TGTAAGACAAGAATTTTAGGACGGA 58.239 36.000 0.00 0.00 0.00 4.69
3327 4537 7.391620 TGTAAGACAAGAATTTTAGGACGGAT 58.608 34.615 0.00 0.00 0.00 4.18
3328 4538 6.743575 AAGACAAGAATTTTAGGACGGATG 57.256 37.500 0.00 0.00 0.00 3.51
3329 4539 5.186198 AGACAAGAATTTTAGGACGGATGG 58.814 41.667 0.00 0.00 0.00 3.51
3330 4540 5.045869 AGACAAGAATTTTAGGACGGATGGA 60.046 40.000 0.00 0.00 0.00 3.41
3447 4658 2.165437 GCCCTTTGTTGACACTGTTTGA 59.835 45.455 0.00 0.00 0.00 2.69
3460 4671 4.636206 ACACTGTTTGAAAGTCCACTTCTC 59.364 41.667 0.00 0.00 34.61 2.87
3467 4678 6.419484 TTGAAAGTCCACTTCTCACAGATA 57.581 37.500 0.00 0.00 34.61 1.98
3474 4685 4.937620 TCCACTTCTCACAGATAATTGCAC 59.062 41.667 0.00 0.00 0.00 4.57
3497 4708 3.491619 CGGTGTGAGAGATGTCATAAGGG 60.492 52.174 0.00 0.00 0.00 3.95
3498 4709 3.181461 GGTGTGAGAGATGTCATAAGGGG 60.181 52.174 0.00 0.00 0.00 4.79
3499 4710 3.706594 GTGTGAGAGATGTCATAAGGGGA 59.293 47.826 0.00 0.00 0.00 4.81
3528 5016 6.100424 TGTTTTTCCCCCACAAATAAATGAGT 59.900 34.615 0.00 0.00 0.00 3.41
3529 5017 7.290248 TGTTTTTCCCCCACAAATAAATGAGTA 59.710 33.333 0.00 0.00 0.00 2.59
3530 5018 7.475137 TTTTCCCCCACAAATAAATGAGTAG 57.525 36.000 0.00 0.00 0.00 2.57
3565 5053 3.204526 ACGTGGTTGTTACGGATTCAAA 58.795 40.909 0.00 0.00 45.24 2.69
3585 5073 4.650972 AAGGACTGTAATTAGGTGGCAA 57.349 40.909 0.00 0.00 0.00 4.52
3594 5082 9.200817 ACTGTAATTAGGTGGCAATTATTGATT 57.799 29.630 9.36 0.69 32.17 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.167693 CCGGAGTTTGTAGCCACTATGA 59.832 50.000 0.00 0.00 0.00 2.15
1 2 2.550978 CCGGAGTTTGTAGCCACTATG 58.449 52.381 0.00 0.00 0.00 2.23
2 3 1.134491 GCCGGAGTTTGTAGCCACTAT 60.134 52.381 5.05 0.00 0.00 2.12
3 4 0.248289 GCCGGAGTTTGTAGCCACTA 59.752 55.000 5.05 0.00 0.00 2.74
4 5 1.003718 GCCGGAGTTTGTAGCCACT 60.004 57.895 5.05 0.00 0.00 4.00
5 6 0.887387 TTGCCGGAGTTTGTAGCCAC 60.887 55.000 5.05 0.00 0.00 5.01
6 7 0.179015 TTTGCCGGAGTTTGTAGCCA 60.179 50.000 5.05 0.00 0.00 4.75
7 8 0.240145 GTTTGCCGGAGTTTGTAGCC 59.760 55.000 5.05 0.00 0.00 3.93
8 9 1.197036 GAGTTTGCCGGAGTTTGTAGC 59.803 52.381 5.05 0.00 0.00 3.58
9 10 1.459592 CGAGTTTGCCGGAGTTTGTAG 59.540 52.381 5.05 0.00 0.00 2.74
10 11 1.504359 CGAGTTTGCCGGAGTTTGTA 58.496 50.000 5.05 0.00 0.00 2.41
11 12 2.317230 CGAGTTTGCCGGAGTTTGT 58.683 52.632 5.05 0.00 0.00 2.83
18 19 4.038080 GCAACCCGAGTTTGCCGG 62.038 66.667 0.00 0.00 46.10 6.13
19 20 3.254014 CTGCAACCCGAGTTTGCCG 62.254 63.158 11.50 3.72 32.45 5.69
20 21 2.644992 CTGCAACCCGAGTTTGCC 59.355 61.111 11.50 0.00 32.45 4.52
21 22 2.050077 GCTGCAACCCGAGTTTGC 60.050 61.111 8.21 8.21 32.45 3.68
22 23 0.886490 AGAGCTGCAACCCGAGTTTG 60.886 55.000 1.02 0.00 32.45 2.93
23 24 0.886490 CAGAGCTGCAACCCGAGTTT 60.886 55.000 1.02 0.00 32.45 2.66
24 25 1.302033 CAGAGCTGCAACCCGAGTT 60.302 57.895 1.02 0.00 36.33 3.01
25 26 2.210013 TCAGAGCTGCAACCCGAGT 61.210 57.895 1.02 0.00 0.00 4.18
26 27 1.739562 GTCAGAGCTGCAACCCGAG 60.740 63.158 1.02 0.00 0.00 4.63
27 28 2.343758 GTCAGAGCTGCAACCCGA 59.656 61.111 1.02 0.00 0.00 5.14
28 29 3.114616 CGTCAGAGCTGCAACCCG 61.115 66.667 1.02 0.00 0.00 5.28
29 30 1.301716 TTCGTCAGAGCTGCAACCC 60.302 57.895 1.02 0.00 0.00 4.11
30 31 1.862806 GTTCGTCAGAGCTGCAACC 59.137 57.895 1.02 0.00 0.00 3.77
31 32 1.215655 ACGTTCGTCAGAGCTGCAAC 61.216 55.000 1.02 0.00 0.00 4.17
32 33 1.067416 ACGTTCGTCAGAGCTGCAA 59.933 52.632 1.02 0.00 0.00 4.08
33 34 1.661509 CACGTTCGTCAGAGCTGCA 60.662 57.895 1.02 0.00 0.00 4.41
34 35 2.375766 CCACGTTCGTCAGAGCTGC 61.376 63.158 0.00 0.00 0.00 5.25
35 36 0.597637 AACCACGTTCGTCAGAGCTG 60.598 55.000 0.00 0.00 0.00 4.24
36 37 0.597637 CAACCACGTTCGTCAGAGCT 60.598 55.000 0.00 0.00 0.00 4.09
37 38 0.874607 ACAACCACGTTCGTCAGAGC 60.875 55.000 0.00 0.00 0.00 4.09
38 39 2.316792 CTACAACCACGTTCGTCAGAG 58.683 52.381 0.00 0.00 0.00 3.35
39 40 1.601162 GCTACAACCACGTTCGTCAGA 60.601 52.381 0.00 0.00 0.00 3.27
40 41 0.782384 GCTACAACCACGTTCGTCAG 59.218 55.000 0.00 0.00 0.00 3.51
41 42 0.386476 AGCTACAACCACGTTCGTCA 59.614 50.000 0.00 0.00 0.00 4.35
42 43 1.494824 AAGCTACAACCACGTTCGTC 58.505 50.000 0.00 0.00 0.00 4.20
43 44 1.944032 AAAGCTACAACCACGTTCGT 58.056 45.000 0.00 0.00 0.00 3.85
44 45 3.328237 AAAAAGCTACAACCACGTTCG 57.672 42.857 0.00 0.00 0.00 3.95
61 62 4.436242 TGCTACAACCGTTCAACAAAAA 57.564 36.364 0.00 0.00 0.00 1.94
62 63 4.640789 ATGCTACAACCGTTCAACAAAA 57.359 36.364 0.00 0.00 0.00 2.44
63 64 4.640789 AATGCTACAACCGTTCAACAAA 57.359 36.364 0.00 0.00 0.00 2.83
64 65 4.096532 TCAAATGCTACAACCGTTCAACAA 59.903 37.500 0.00 0.00 0.00 2.83
65 66 3.628032 TCAAATGCTACAACCGTTCAACA 59.372 39.130 0.00 0.00 0.00 3.33
66 67 3.972502 GTCAAATGCTACAACCGTTCAAC 59.027 43.478 0.00 0.00 0.00 3.18
67 68 3.303461 CGTCAAATGCTACAACCGTTCAA 60.303 43.478 0.00 0.00 0.00 2.69
68 69 2.222213 CGTCAAATGCTACAACCGTTCA 59.778 45.455 0.00 0.00 0.00 3.18
69 70 2.477375 TCGTCAAATGCTACAACCGTTC 59.523 45.455 0.00 0.00 0.00 3.95
70 71 2.222445 GTCGTCAAATGCTACAACCGTT 59.778 45.455 0.00 0.00 0.00 4.44
71 72 1.796459 GTCGTCAAATGCTACAACCGT 59.204 47.619 0.00 0.00 0.00 4.83
72 73 1.795872 TGTCGTCAAATGCTACAACCG 59.204 47.619 0.00 0.00 0.00 4.44
73 74 2.546368 TGTGTCGTCAAATGCTACAACC 59.454 45.455 0.00 0.00 0.00 3.77
74 75 3.541711 GTGTGTCGTCAAATGCTACAAC 58.458 45.455 0.00 0.00 0.00 3.32
75 76 2.219903 CGTGTGTCGTCAAATGCTACAA 59.780 45.455 0.00 0.00 34.52 2.41
76 77 1.790043 CGTGTGTCGTCAAATGCTACA 59.210 47.619 0.00 0.00 34.52 2.74
77 78 2.487406 CGTGTGTCGTCAAATGCTAC 57.513 50.000 0.00 0.00 34.52 3.58
96 97 0.739813 ACGGAGCTACAATCGGCAAC 60.740 55.000 0.00 0.00 0.00 4.17
97 98 0.036765 AACGGAGCTACAATCGGCAA 60.037 50.000 0.00 0.00 0.00 4.52
98 99 0.739462 CAACGGAGCTACAATCGGCA 60.739 55.000 0.00 0.00 0.00 5.69
99 100 0.739813 ACAACGGAGCTACAATCGGC 60.740 55.000 0.00 0.00 0.00 5.54
100 101 0.999406 CACAACGGAGCTACAATCGG 59.001 55.000 0.00 0.00 0.00 4.18
101 102 0.370273 GCACAACGGAGCTACAATCG 59.630 55.000 0.00 0.00 0.00 3.34
102 103 1.128692 GTGCACAACGGAGCTACAATC 59.871 52.381 13.17 0.00 0.00 2.67
103 104 1.156736 GTGCACAACGGAGCTACAAT 58.843 50.000 13.17 0.00 0.00 2.71
104 105 0.179070 TGTGCACAACGGAGCTACAA 60.179 50.000 19.28 0.00 0.00 2.41
105 106 0.878523 GTGTGCACAACGGAGCTACA 60.879 55.000 23.59 0.00 0.00 2.74
106 107 1.860078 GTGTGCACAACGGAGCTAC 59.140 57.895 23.59 1.26 0.00 3.58
107 108 1.663388 CGTGTGCACAACGGAGCTA 60.663 57.895 23.59 0.00 0.00 3.32
108 109 2.967076 CGTGTGCACAACGGAGCT 60.967 61.111 23.59 0.00 0.00 4.09
109 110 2.819552 AACGTGTGCACAACGGAGC 61.820 57.895 30.87 16.47 0.00 4.70
110 111 1.011242 CAACGTGTGCACAACGGAG 60.011 57.895 30.87 22.95 0.00 4.63
111 112 0.459759 TACAACGTGTGCACAACGGA 60.460 50.000 30.87 18.00 0.00 4.69
112 113 0.042535 CTACAACGTGTGCACAACGG 60.043 55.000 30.87 22.33 0.00 4.44
113 114 0.653323 GCTACAACGTGTGCACAACG 60.653 55.000 28.18 28.18 0.00 4.10
114 115 0.375454 TGCTACAACGTGTGCACAAC 59.625 50.000 23.59 14.69 32.45 3.32
115 116 1.262950 GATGCTACAACGTGTGCACAA 59.737 47.619 23.59 3.42 37.28 3.33
116 117 0.865111 GATGCTACAACGTGTGCACA 59.135 50.000 17.42 17.42 37.28 4.57
117 118 1.148310 AGATGCTACAACGTGTGCAC 58.852 50.000 10.75 10.75 37.28 4.57
118 119 1.877637 AAGATGCTACAACGTGTGCA 58.122 45.000 7.32 7.32 38.21 4.57
119 120 2.574322 CAAAGATGCTACAACGTGTGC 58.426 47.619 0.00 0.00 0.00 4.57
143 144 3.181520 CGTACCACAAAGCTACAATCAGC 60.182 47.826 0.00 0.00 42.12 4.26
144 145 3.994392 ACGTACCACAAAGCTACAATCAG 59.006 43.478 0.00 0.00 0.00 2.90
145 146 3.743911 CACGTACCACAAAGCTACAATCA 59.256 43.478 0.00 0.00 0.00 2.57
146 147 3.124636 CCACGTACCACAAAGCTACAATC 59.875 47.826 0.00 0.00 0.00 2.67
147 148 3.071479 CCACGTACCACAAAGCTACAAT 58.929 45.455 0.00 0.00 0.00 2.71
148 149 2.158928 ACCACGTACCACAAAGCTACAA 60.159 45.455 0.00 0.00 0.00 2.41
149 150 1.413445 ACCACGTACCACAAAGCTACA 59.587 47.619 0.00 0.00 0.00 2.74
150 151 2.159327 ACCACGTACCACAAAGCTAC 57.841 50.000 0.00 0.00 0.00 3.58
151 152 2.158928 ACAACCACGTACCACAAAGCTA 60.159 45.455 0.00 0.00 0.00 3.32
152 153 1.305201 CAACCACGTACCACAAAGCT 58.695 50.000 0.00 0.00 0.00 3.74
153 154 1.018910 ACAACCACGTACCACAAAGC 58.981 50.000 0.00 0.00 0.00 3.51
154 155 2.222445 GCTACAACCACGTACCACAAAG 59.778 50.000 0.00 0.00 0.00 2.77
155 156 2.211806 GCTACAACCACGTACCACAAA 58.788 47.619 0.00 0.00 0.00 2.83
156 157 1.138464 TGCTACAACCACGTACCACAA 59.862 47.619 0.00 0.00 0.00 3.33
157 158 0.751452 TGCTACAACCACGTACCACA 59.249 50.000 0.00 0.00 0.00 4.17
158 159 2.088950 ATGCTACAACCACGTACCAC 57.911 50.000 0.00 0.00 0.00 4.16
159 160 2.690786 GAATGCTACAACCACGTACCA 58.309 47.619 0.00 0.00 0.00 3.25
160 161 1.657094 CGAATGCTACAACCACGTACC 59.343 52.381 0.00 0.00 0.00 3.34
161 162 1.060122 GCGAATGCTACAACCACGTAC 59.940 52.381 0.00 0.00 38.39 3.67
162 163 1.352114 GCGAATGCTACAACCACGTA 58.648 50.000 0.00 0.00 38.39 3.57
163 164 1.623081 CGCGAATGCTACAACCACGT 61.623 55.000 0.00 0.00 39.65 4.49
164 165 1.058748 CGCGAATGCTACAACCACG 59.941 57.895 0.00 0.00 39.65 4.94
165 166 0.094730 GTCGCGAATGCTACAACCAC 59.905 55.000 12.06 0.00 36.82 4.16
166 167 0.319986 TGTCGCGAATGCTACAACCA 60.320 50.000 12.06 0.00 43.01 3.67
167 168 0.094730 GTGTCGCGAATGCTACAACC 59.905 55.000 12.06 0.00 46.75 3.77
168 169 0.094730 GGTGTCGCGAATGCTACAAC 59.905 55.000 12.06 2.24 46.75 3.32
169 170 0.319986 TGGTGTCGCGAATGCTACAA 60.320 50.000 12.06 0.00 46.75 2.41
170 171 0.108377 ATGGTGTCGCGAATGCTACA 60.108 50.000 12.06 0.00 43.65 2.74
171 172 0.577269 GATGGTGTCGCGAATGCTAC 59.423 55.000 12.06 5.26 39.65 3.58
172 173 0.869880 CGATGGTGTCGCGAATGCTA 60.870 55.000 12.06 1.88 44.33 3.49
173 174 2.167219 CGATGGTGTCGCGAATGCT 61.167 57.895 12.06 0.00 44.33 3.79
174 175 2.321060 CGATGGTGTCGCGAATGC 59.679 61.111 12.06 3.51 44.33 3.56
187 188 4.208632 GGAGACCTGCCAACGATG 57.791 61.111 0.00 0.00 0.00 3.84
199 200 2.167398 TAGGTTGCTGCACGGGAGAC 62.167 60.000 0.00 0.00 0.00 3.36
200 201 1.476845 TTAGGTTGCTGCACGGGAGA 61.477 55.000 0.00 0.00 0.00 3.71
201 202 0.392998 ATTAGGTTGCTGCACGGGAG 60.393 55.000 0.00 0.00 0.00 4.30
202 203 0.676466 CATTAGGTTGCTGCACGGGA 60.676 55.000 0.00 0.00 0.00 5.14
203 204 1.656818 CCATTAGGTTGCTGCACGGG 61.657 60.000 0.00 0.00 0.00 5.28
204 205 1.656818 CCCATTAGGTTGCTGCACGG 61.657 60.000 0.00 0.00 0.00 4.94
205 206 1.656818 CCCCATTAGGTTGCTGCACG 61.657 60.000 0.00 0.00 0.00 5.34
206 207 0.611896 ACCCCATTAGGTTGCTGCAC 60.612 55.000 0.00 0.00 36.44 4.57
207 208 0.323360 GACCCCATTAGGTTGCTGCA 60.323 55.000 0.00 0.00 41.42 4.41
208 209 1.037579 GGACCCCATTAGGTTGCTGC 61.038 60.000 0.00 0.00 41.42 5.25
209 210 0.748005 CGGACCCCATTAGGTTGCTG 60.748 60.000 0.00 0.00 41.42 4.41
210 211 1.607612 CGGACCCCATTAGGTTGCT 59.392 57.895 0.00 0.00 41.42 3.91
211 212 2.119029 GCGGACCCCATTAGGTTGC 61.119 63.158 0.00 0.00 41.42 4.17
212 213 1.453197 GGCGGACCCCATTAGGTTG 60.453 63.158 0.00 0.00 41.42 3.77
213 214 3.004090 GGCGGACCCCATTAGGTT 58.996 61.111 0.00 0.00 41.42 3.50
214 215 3.476419 CGGCGGACCCCATTAGGT 61.476 66.667 0.00 0.00 45.12 3.08
215 216 4.250305 CCGGCGGACCCCATTAGG 62.250 72.222 24.41 0.00 0.00 2.69
216 217 3.476419 ACCGGCGGACCCCATTAG 61.476 66.667 35.78 1.17 0.00 1.73
217 218 3.788145 CACCGGCGGACCCCATTA 61.788 66.667 35.78 0.00 0.00 1.90
579 580 0.923358 TTCCTTCCACCACACAACCT 59.077 50.000 0.00 0.00 0.00 3.50
580 581 1.133915 TCTTCCTTCCACCACACAACC 60.134 52.381 0.00 0.00 0.00 3.77
581 582 2.341846 TCTTCCTTCCACCACACAAC 57.658 50.000 0.00 0.00 0.00 3.32
582 583 2.507886 TCTTCTTCCTTCCACCACACAA 59.492 45.455 0.00 0.00 0.00 3.33
583 584 2.123589 TCTTCTTCCTTCCACCACACA 58.876 47.619 0.00 0.00 0.00 3.72
584 585 2.930826 TCTTCTTCCTTCCACCACAC 57.069 50.000 0.00 0.00 0.00 3.82
585 586 2.106511 CCTTCTTCTTCCTTCCACCACA 59.893 50.000 0.00 0.00 0.00 4.17
586 587 2.784347 CCTTCTTCTTCCTTCCACCAC 58.216 52.381 0.00 0.00 0.00 4.16
587 588 1.073923 GCCTTCTTCTTCCTTCCACCA 59.926 52.381 0.00 0.00 0.00 4.17
588 589 1.073923 TGCCTTCTTCTTCCTTCCACC 59.926 52.381 0.00 0.00 0.00 4.61
589 590 2.568623 TGCCTTCTTCTTCCTTCCAC 57.431 50.000 0.00 0.00 0.00 4.02
590 591 3.593442 TTTGCCTTCTTCTTCCTTCCA 57.407 42.857 0.00 0.00 0.00 3.53
591 592 3.256879 CCTTTTGCCTTCTTCTTCCTTCC 59.743 47.826 0.00 0.00 0.00 3.46
592 593 4.145052 TCCTTTTGCCTTCTTCTTCCTTC 58.855 43.478 0.00 0.00 0.00 3.46
593 594 4.184649 TCCTTTTGCCTTCTTCTTCCTT 57.815 40.909 0.00 0.00 0.00 3.36
594 595 3.884037 TCCTTTTGCCTTCTTCTTCCT 57.116 42.857 0.00 0.00 0.00 3.36
595 596 4.937201 TTTCCTTTTGCCTTCTTCTTCC 57.063 40.909 0.00 0.00 0.00 3.46
617 618 1.602377 CGCGTCCTTCTTCCAGTTTTT 59.398 47.619 0.00 0.00 0.00 1.94
618 619 1.226746 CGCGTCCTTCTTCCAGTTTT 58.773 50.000 0.00 0.00 0.00 2.43
619 620 1.228657 GCGCGTCCTTCTTCCAGTTT 61.229 55.000 8.43 0.00 0.00 2.66
620 621 1.668151 GCGCGTCCTTCTTCCAGTT 60.668 57.895 8.43 0.00 0.00 3.16
621 622 2.048127 GCGCGTCCTTCTTCCAGT 60.048 61.111 8.43 0.00 0.00 4.00
622 623 3.181967 CGCGCGTCCTTCTTCCAG 61.182 66.667 24.19 0.00 0.00 3.86
623 624 3.626680 CTCGCGCGTCCTTCTTCCA 62.627 63.158 30.98 4.84 0.00 3.53
624 625 2.881352 CTCGCGCGTCCTTCTTCC 60.881 66.667 30.98 0.00 0.00 3.46
625 626 2.153322 GTCTCGCGCGTCCTTCTTC 61.153 63.158 30.98 8.93 0.00 2.87
626 627 2.126424 GTCTCGCGCGTCCTTCTT 60.126 61.111 30.98 0.00 0.00 2.52
627 628 3.329688 CTGTCTCGCGCGTCCTTCT 62.330 63.158 30.98 0.00 0.00 2.85
628 629 2.876645 CTGTCTCGCGCGTCCTTC 60.877 66.667 30.98 16.41 0.00 3.46
629 630 4.421479 CCTGTCTCGCGCGTCCTT 62.421 66.667 30.98 0.00 0.00 3.36
636 637 4.933064 GATCCGGCCTGTCTCGCG 62.933 72.222 0.00 0.00 0.00 5.87
637 638 4.593864 GGATCCGGCCTGTCTCGC 62.594 72.222 0.00 0.00 0.00 5.03
638 639 2.502492 ATGGATCCGGCCTGTCTCG 61.502 63.158 7.39 0.00 0.00 4.04
639 640 1.070445 CATGGATCCGGCCTGTCTC 59.930 63.158 7.39 0.00 0.00 3.36
640 641 1.690633 ACATGGATCCGGCCTGTCT 60.691 57.895 7.39 0.00 0.00 3.41
641 642 1.524621 CACATGGATCCGGCCTGTC 60.525 63.158 7.39 0.00 0.00 3.51
642 643 2.591753 CACATGGATCCGGCCTGT 59.408 61.111 7.39 5.31 0.00 4.00
643 644 2.203252 CCACATGGATCCGGCCTG 60.203 66.667 7.39 4.66 37.39 4.85
644 645 2.366837 TCCACATGGATCCGGCCT 60.367 61.111 7.39 0.00 39.78 5.19
653 654 3.005898 CGCGTTCGATCCACATGG 58.994 61.111 0.00 0.00 38.10 3.66
654 655 2.321060 GCGCGTTCGATCCACATG 59.679 61.111 8.43 0.00 38.10 3.21
655 656 3.254654 CGCGCGTTCGATCCACAT 61.255 61.111 24.19 0.00 38.10 3.21
660 661 4.669904 CATCGCGCGCGTTCGATC 62.670 66.667 46.54 15.99 42.73 3.69
673 674 3.554692 GTTCGGCCAGTCGCATCG 61.555 66.667 2.24 0.00 40.31 3.84
674 675 3.554692 CGTTCGGCCAGTCGCATC 61.555 66.667 2.24 0.00 40.31 3.91
675 676 3.876589 AACGTTCGGCCAGTCGCAT 62.877 57.895 2.24 0.00 40.31 4.73
676 677 4.595538 AACGTTCGGCCAGTCGCA 62.596 61.111 2.24 0.00 40.31 5.10
677 678 3.291167 GAAACGTTCGGCCAGTCGC 62.291 63.158 2.24 0.00 0.00 5.19
678 679 2.851104 GAAACGTTCGGCCAGTCG 59.149 61.111 2.24 6.21 0.00 4.18
687 688 4.379143 GCACCGGCCGAAACGTTC 62.379 66.667 30.73 6.41 0.00 3.95
699 700 4.439472 GTTTACGCCAGCGCACCG 62.439 66.667 11.47 11.69 44.19 4.94
700 701 4.097863 GGTTTACGCCAGCGCACC 62.098 66.667 11.47 11.98 44.19 5.01
701 702 4.439472 CGGTTTACGCCAGCGCAC 62.439 66.667 11.47 6.51 44.19 5.34
710 711 7.998212 CGCTAATTATAAGGTAAACGGTTTACG 59.002 37.037 27.97 16.06 44.96 3.18
711 712 8.275632 CCGCTAATTATAAGGTAAACGGTTTAC 58.724 37.037 27.55 27.55 43.65 2.01
712 713 7.440856 CCCGCTAATTATAAGGTAAACGGTTTA 59.559 37.037 9.18 9.18 35.26 2.01
713 714 6.260714 CCCGCTAATTATAAGGTAAACGGTTT 59.739 38.462 11.33 11.33 35.26 3.27
714 715 5.759763 CCCGCTAATTATAAGGTAAACGGTT 59.240 40.000 0.00 0.00 35.26 4.44
715 716 5.163311 ACCCGCTAATTATAAGGTAAACGGT 60.163 40.000 11.20 0.00 35.26 4.83
716 717 5.299949 ACCCGCTAATTATAAGGTAAACGG 58.700 41.667 0.00 0.00 36.74 4.44
717 718 6.218746 AGACCCGCTAATTATAAGGTAAACG 58.781 40.000 1.57 0.00 0.00 3.60
718 719 7.170489 GTGAGACCCGCTAATTATAAGGTAAAC 59.830 40.741 1.57 0.00 0.00 2.01
719 720 7.212274 GTGAGACCCGCTAATTATAAGGTAAA 58.788 38.462 1.57 0.00 0.00 2.01
720 721 6.239402 GGTGAGACCCGCTAATTATAAGGTAA 60.239 42.308 1.57 0.00 30.04 2.85
721 722 5.244626 GGTGAGACCCGCTAATTATAAGGTA 59.755 44.000 1.57 0.00 30.04 3.08
722 723 4.040095 GGTGAGACCCGCTAATTATAAGGT 59.960 45.833 1.23 1.23 30.04 3.50
723 724 4.566987 GGTGAGACCCGCTAATTATAAGG 58.433 47.826 0.00 0.00 30.04 2.69
758 759 1.843376 CACACACACCCCTCCCTCT 60.843 63.158 0.00 0.00 0.00 3.69
762 763 1.525995 CACACACACACACCCCTCC 60.526 63.158 0.00 0.00 0.00 4.30
763 764 0.393808 AACACACACACACACCCCTC 60.394 55.000 0.00 0.00 0.00 4.30
764 765 0.913205 TAACACACACACACACCCCT 59.087 50.000 0.00 0.00 0.00 4.79
771 772 9.781633 ACCTATATAAGTTTTAACACACACACA 57.218 29.630 0.00 0.00 0.00 3.72
830 1994 3.720002 TGTCCATCCTCTAATTTACCCCC 59.280 47.826 0.00 0.00 0.00 5.40
837 2005 5.601662 CACGTATGTGTCCATCCTCTAATT 58.398 41.667 6.93 0.00 41.34 1.40
879 2047 5.160607 AGTAAACTTACATGCAGCACCTA 57.839 39.130 0.00 0.00 36.12 3.08
985 2154 0.933796 GCCATTTCGCTAGCTGAGAC 59.066 55.000 13.93 0.00 0.00 3.36
986 2155 0.826715 AGCCATTTCGCTAGCTGAGA 59.173 50.000 13.93 7.63 37.32 3.27
987 2156 1.661341 AAGCCATTTCGCTAGCTGAG 58.339 50.000 13.93 0.00 38.44 3.35
1020 2189 3.515901 AGAAAGACGAAGGGTAGCAAGAT 59.484 43.478 0.00 0.00 0.00 2.40
1086 2258 0.678048 GCAGAACATTCCTCCGCCTT 60.678 55.000 0.00 0.00 0.00 4.35
1680 2858 4.647399 AGAGAAACTGGATCAGTAGTAGCC 59.353 45.833 0.67 0.00 44.62 3.93
1868 3046 3.130516 TCCTACTTTCTGGTAGTGCGATG 59.869 47.826 0.00 0.00 37.92 3.84
1916 3094 1.863454 GAGCAGCACCTGAATACATCG 59.137 52.381 0.00 0.00 32.44 3.84
2041 3219 3.056749 AGTGTTAGGAGCTGGTAACTTCG 60.057 47.826 13.42 0.00 31.54 3.79
2042 3220 4.246458 CAGTGTTAGGAGCTGGTAACTTC 58.754 47.826 13.42 8.40 31.54 3.01
2082 3264 1.545136 TGACGGTCACCTGCGTAATAA 59.455 47.619 6.76 0.00 0.00 1.40
2097 3279 2.618053 GACCTGTAACTCCATTGACGG 58.382 52.381 0.00 0.00 0.00 4.79
2271 3464 2.157640 ACTGAGCAGCCATCTAGACT 57.842 50.000 0.00 0.00 0.00 3.24
2272 3465 4.599047 ATTACTGAGCAGCCATCTAGAC 57.401 45.455 0.00 0.00 0.00 2.59
2308 3501 0.459411 GCAAACAGCACAAACCCGTT 60.459 50.000 0.00 0.00 44.79 4.44
2481 3676 3.492353 CCCATCCGCACCCCATCT 61.492 66.667 0.00 0.00 0.00 2.90
2635 3830 6.833041 TGGGCTTCCGATCAATTTATTACTA 58.167 36.000 0.00 0.00 0.00 1.82
2903 4109 3.928727 AGAAACGTAGAACGATGTCCA 57.071 42.857 6.44 0.00 46.05 4.02
2963 4169 6.017109 CCCTCGATTGTAACCCTATTTTCATG 60.017 42.308 0.00 0.00 0.00 3.07
2966 4172 4.275196 GCCCTCGATTGTAACCCTATTTTC 59.725 45.833 0.00 0.00 0.00 2.29
2973 4179 2.052782 ATTGCCCTCGATTGTAACCC 57.947 50.000 0.00 0.00 0.00 4.11
3000 4207 7.016153 AGGATGAAATAGGTGAACAACAGTA 57.984 36.000 0.00 0.00 0.00 2.74
3002 4209 6.316390 GGTAGGATGAAATAGGTGAACAACAG 59.684 42.308 0.00 0.00 0.00 3.16
3025 4232 1.789576 ATTGGCGAAGGGAGTTGGGT 61.790 55.000 0.00 0.00 0.00 4.51
3028 4235 1.247567 ACAATTGGCGAAGGGAGTTG 58.752 50.000 10.83 0.00 0.00 3.16
3029 4236 2.039879 AGTACAATTGGCGAAGGGAGTT 59.960 45.455 10.83 0.00 0.00 3.01
3030 4237 1.628846 AGTACAATTGGCGAAGGGAGT 59.371 47.619 10.83 0.00 0.00 3.85
3032 4239 2.568062 TGTAGTACAATTGGCGAAGGGA 59.432 45.455 10.83 0.00 0.00 4.20
3033 4240 2.676342 GTGTAGTACAATTGGCGAAGGG 59.324 50.000 10.83 0.00 0.00 3.95
3034 4241 2.347452 CGTGTAGTACAATTGGCGAAGG 59.653 50.000 10.83 0.00 0.00 3.46
3037 4244 1.404449 CCCGTGTAGTACAATTGGCGA 60.404 52.381 10.83 0.00 0.00 5.54
3038 4245 1.003851 CCCGTGTAGTACAATTGGCG 58.996 55.000 10.83 3.97 0.00 5.69
3055 4265 4.822026 ACATAGATGATAGTTAAGCGCCC 58.178 43.478 2.29 0.00 0.00 6.13
3073 4283 6.128227 GGTTGCAGTTCCGTGTATTAAACATA 60.128 38.462 0.00 0.00 41.10 2.29
3074 4284 5.335348 GGTTGCAGTTCCGTGTATTAAACAT 60.335 40.000 0.00 0.00 41.10 2.71
3075 4285 4.023878 GGTTGCAGTTCCGTGTATTAAACA 60.024 41.667 0.00 0.00 35.06 2.83
3076 4286 4.469552 GGTTGCAGTTCCGTGTATTAAAC 58.530 43.478 0.00 0.00 0.00 2.01
3077 4287 3.186817 CGGTTGCAGTTCCGTGTATTAAA 59.813 43.478 15.53 0.00 41.58 1.52
3078 4288 2.737783 CGGTTGCAGTTCCGTGTATTAA 59.262 45.455 15.53 0.00 41.58 1.40
3079 4289 2.339418 CGGTTGCAGTTCCGTGTATTA 58.661 47.619 15.53 0.00 41.58 0.98
3080 4290 1.153353 CGGTTGCAGTTCCGTGTATT 58.847 50.000 15.53 0.00 41.58 1.89
3081 4291 2.835605 CGGTTGCAGTTCCGTGTAT 58.164 52.632 15.53 0.00 41.58 2.29
3082 4292 4.347096 CGGTTGCAGTTCCGTGTA 57.653 55.556 15.53 0.00 41.58 2.90
3087 4297 2.619646 TCCTTTAAACGGTTGCAGTTCC 59.380 45.455 0.00 0.00 0.00 3.62
3088 4298 3.974871 TCCTTTAAACGGTTGCAGTTC 57.025 42.857 0.00 0.00 0.00 3.01
3089 4299 4.722361 TTTCCTTTAAACGGTTGCAGTT 57.278 36.364 0.00 0.00 0.00 3.16
3090 4300 4.929819 ATTTCCTTTAAACGGTTGCAGT 57.070 36.364 0.00 0.00 0.00 4.40
3091 4301 5.737290 CGATATTTCCTTTAAACGGTTGCAG 59.263 40.000 0.00 0.00 0.00 4.41
3092 4302 5.181622 ACGATATTTCCTTTAAACGGTTGCA 59.818 36.000 0.00 0.00 0.00 4.08
3093 4303 5.633927 ACGATATTTCCTTTAAACGGTTGC 58.366 37.500 0.00 0.00 0.00 4.17
3094 4304 8.658609 TCTTACGATATTTCCTTTAAACGGTTG 58.341 33.333 0.00 0.00 0.00 3.77
3095 4305 8.776376 TCTTACGATATTTCCTTTAAACGGTT 57.224 30.769 0.00 0.00 0.00 4.44
3096 4306 8.253113 TCTCTTACGATATTTCCTTTAAACGGT 58.747 33.333 0.00 0.00 0.00 4.83
3097 4307 8.638685 TCTCTTACGATATTTCCTTTAAACGG 57.361 34.615 0.00 0.00 0.00 4.44
3136 4346 9.948964 CCACTCACAATAATCTATCCATGATAA 57.051 33.333 0.00 0.00 0.00 1.75
3137 4347 8.542926 CCCACTCACAATAATCTATCCATGATA 58.457 37.037 0.00 0.00 0.00 2.15
3148 4358 6.260936 CCTATGTTGTCCCACTCACAATAATC 59.739 42.308 0.00 0.00 36.19 1.75
3165 4375 1.369091 GCCGGACAGCACCTATGTTG 61.369 60.000 5.05 0.00 42.43 3.33
3166 4376 1.078426 GCCGGACAGCACCTATGTT 60.078 57.895 5.05 0.00 0.00 2.71
3167 4377 1.836999 TTGCCGGACAGCACCTATGT 61.837 55.000 5.05 0.00 43.97 2.29
3168 4378 1.078497 TTGCCGGACAGCACCTATG 60.078 57.895 5.05 0.00 43.97 2.23
3169 4379 1.221840 CTTGCCGGACAGCACCTAT 59.778 57.895 5.05 0.00 43.97 2.57
3170 4380 2.662596 CTTGCCGGACAGCACCTA 59.337 61.111 5.05 0.00 43.97 3.08
3171 4381 4.335647 CCTTGCCGGACAGCACCT 62.336 66.667 5.05 0.00 43.97 4.00
3172 4382 4.643387 ACCTTGCCGGACAGCACC 62.643 66.667 5.05 0.00 43.97 5.01
3173 4383 2.193536 AAACCTTGCCGGACAGCAC 61.194 57.895 5.05 0.00 43.97 4.40
3174 4384 2.192861 CAAACCTTGCCGGACAGCA 61.193 57.895 5.05 0.00 42.17 4.41
3175 4385 2.193536 ACAAACCTTGCCGGACAGC 61.194 57.895 5.05 0.00 36.31 4.40
3176 4386 1.101049 ACACAAACCTTGCCGGACAG 61.101 55.000 5.05 0.00 36.31 3.51
3177 4387 0.681564 AACACAAACCTTGCCGGACA 60.682 50.000 5.05 0.00 36.31 4.02
3178 4388 0.248866 CAACACAAACCTTGCCGGAC 60.249 55.000 5.05 0.00 36.31 4.79
3179 4389 2.010582 GCAACACAAACCTTGCCGGA 62.011 55.000 5.05 0.00 37.41 5.14
3180 4390 1.591327 GCAACACAAACCTTGCCGG 60.591 57.895 0.00 0.00 37.41 6.13
3181 4391 0.459237 TTGCAACACAAACCTTGCCG 60.459 50.000 0.00 0.00 41.83 5.69
3182 4392 1.731720 TTTGCAACACAAACCTTGCC 58.268 45.000 0.00 0.00 43.35 4.52
3189 4399 2.488545 AGTACCACGTTTGCAACACAAA 59.511 40.909 0.00 0.00 46.01 2.83
3190 4400 2.085320 AGTACCACGTTTGCAACACAA 58.915 42.857 0.00 0.00 36.13 3.33
3191 4401 1.666700 GAGTACCACGTTTGCAACACA 59.333 47.619 0.00 0.00 0.00 3.72
3192 4402 1.003223 GGAGTACCACGTTTGCAACAC 60.003 52.381 0.00 0.00 35.97 3.32
3193 4403 1.301423 GGAGTACCACGTTTGCAACA 58.699 50.000 0.00 0.00 35.97 3.33
3194 4404 0.589708 GGGAGTACCACGTTTGCAAC 59.410 55.000 0.00 0.00 39.85 4.17
3195 4405 0.470766 AGGGAGTACCACGTTTGCAA 59.529 50.000 0.00 0.00 43.89 4.08
3196 4406 0.034337 GAGGGAGTACCACGTTTGCA 59.966 55.000 0.00 0.00 43.89 4.08
3197 4407 0.672711 GGAGGGAGTACCACGTTTGC 60.673 60.000 0.00 0.00 43.89 3.68
3198 4408 0.389426 CGGAGGGAGTACCACGTTTG 60.389 60.000 0.00 0.00 43.89 2.93
3199 4409 1.969862 CGGAGGGAGTACCACGTTT 59.030 57.895 0.00 0.00 43.89 3.60
3200 4410 3.690745 CGGAGGGAGTACCACGTT 58.309 61.111 0.00 0.00 43.89 3.99
3201 4411 2.437897 ACGGAGGGAGTACCACGT 59.562 61.111 8.22 8.22 45.98 4.49
3202 4412 2.413142 GGACGGAGGGAGTACCACG 61.413 68.421 6.94 6.94 43.89 4.94
3203 4413 2.056815 GGGACGGAGGGAGTACCAC 61.057 68.421 0.00 0.00 42.20 4.16
3204 4414 2.361771 GGGACGGAGGGAGTACCA 59.638 66.667 0.00 0.00 42.20 3.25
3205 4415 0.906282 TTTGGGACGGAGGGAGTACC 60.906 60.000 0.00 0.00 42.94 3.34
3206 4416 0.978907 TTTTGGGACGGAGGGAGTAC 59.021 55.000 0.00 0.00 0.00 2.73
3207 4417 1.961133 ATTTTGGGACGGAGGGAGTA 58.039 50.000 0.00 0.00 0.00 2.59
3208 4418 1.004394 GAATTTTGGGACGGAGGGAGT 59.996 52.381 0.00 0.00 0.00 3.85
3209 4419 1.282157 AGAATTTTGGGACGGAGGGAG 59.718 52.381 0.00 0.00 0.00 4.30
3210 4420 1.368374 AGAATTTTGGGACGGAGGGA 58.632 50.000 0.00 0.00 0.00 4.20
3211 4421 1.818674 CAAGAATTTTGGGACGGAGGG 59.181 52.381 0.00 0.00 0.00 4.30
3212 4422 2.488153 GACAAGAATTTTGGGACGGAGG 59.512 50.000 0.00 0.00 0.00 4.30
3213 4423 3.412386 AGACAAGAATTTTGGGACGGAG 58.588 45.455 0.00 0.00 0.00 4.63
3214 4424 3.502123 AGACAAGAATTTTGGGACGGA 57.498 42.857 0.00 0.00 0.00 4.69
3215 4425 5.699097 TTAAGACAAGAATTTTGGGACGG 57.301 39.130 0.00 0.00 0.00 4.79
3216 4426 8.487176 CAAATTTAAGACAAGAATTTTGGGACG 58.513 33.333 0.00 0.00 32.35 4.79
3217 4427 9.325198 ACAAATTTAAGACAAGAATTTTGGGAC 57.675 29.630 0.00 0.00 33.39 4.46
3218 4428 9.541143 GACAAATTTAAGACAAGAATTTTGGGA 57.459 29.630 0.00 0.00 33.39 4.37
3219 4429 9.546428 AGACAAATTTAAGACAAGAATTTTGGG 57.454 29.630 0.00 0.00 33.39 4.12
3227 4437 9.146984 CCGTATGTAGACAAATTTAAGACAAGA 57.853 33.333 0.00 0.00 0.00 3.02
3228 4438 9.146984 TCCGTATGTAGACAAATTTAAGACAAG 57.853 33.333 0.00 0.00 0.00 3.16
3229 4439 9.661563 ATCCGTATGTAGACAAATTTAAGACAA 57.338 29.630 0.00 0.00 0.00 3.18
3230 4440 9.093970 CATCCGTATGTAGACAAATTTAAGACA 57.906 33.333 0.00 0.00 0.00 3.41
3231 4441 9.095065 ACATCCGTATGTAGACAAATTTAAGAC 57.905 33.333 0.00 0.00 44.66 3.01
3299 4509 8.512138 CCGTCCTAAAATTCTTGTCTTACATTT 58.488 33.333 0.00 0.00 0.00 2.32
3300 4510 7.881232 TCCGTCCTAAAATTCTTGTCTTACATT 59.119 33.333 0.00 0.00 0.00 2.71
3301 4511 7.391620 TCCGTCCTAAAATTCTTGTCTTACAT 58.608 34.615 0.00 0.00 0.00 2.29
3302 4512 6.761312 TCCGTCCTAAAATTCTTGTCTTACA 58.239 36.000 0.00 0.00 0.00 2.41
3303 4513 7.201617 CCATCCGTCCTAAAATTCTTGTCTTAC 60.202 40.741 0.00 0.00 0.00 2.34
3304 4514 6.821665 CCATCCGTCCTAAAATTCTTGTCTTA 59.178 38.462 0.00 0.00 0.00 2.10
3305 4515 5.648092 CCATCCGTCCTAAAATTCTTGTCTT 59.352 40.000 0.00 0.00 0.00 3.01
3306 4516 5.045869 TCCATCCGTCCTAAAATTCTTGTCT 60.046 40.000 0.00 0.00 0.00 3.41
3307 4517 5.183228 TCCATCCGTCCTAAAATTCTTGTC 58.817 41.667 0.00 0.00 0.00 3.18
3308 4518 5.174037 TCCATCCGTCCTAAAATTCTTGT 57.826 39.130 0.00 0.00 0.00 3.16
3309 4519 5.186198 ACTCCATCCGTCCTAAAATTCTTG 58.814 41.667 0.00 0.00 0.00 3.02
3310 4520 5.437191 ACTCCATCCGTCCTAAAATTCTT 57.563 39.130 0.00 0.00 0.00 2.52
3311 4521 5.424252 TGTACTCCATCCGTCCTAAAATTCT 59.576 40.000 0.00 0.00 0.00 2.40
3312 4522 5.667466 TGTACTCCATCCGTCCTAAAATTC 58.333 41.667 0.00 0.00 0.00 2.17
3313 4523 5.687166 TGTACTCCATCCGTCCTAAAATT 57.313 39.130 0.00 0.00 0.00 1.82
3314 4524 5.888982 ATGTACTCCATCCGTCCTAAAAT 57.111 39.130 0.00 0.00 0.00 1.82
3315 4525 5.687166 AATGTACTCCATCCGTCCTAAAA 57.313 39.130 0.00 0.00 31.75 1.52
3316 4526 6.795144 TTAATGTACTCCATCCGTCCTAAA 57.205 37.500 0.00 0.00 31.75 1.85
3317 4527 6.989155 ATTAATGTACTCCATCCGTCCTAA 57.011 37.500 0.00 0.00 31.75 2.69
3318 4528 6.294342 CGAATTAATGTACTCCATCCGTCCTA 60.294 42.308 0.00 0.00 31.75 2.94
3319 4529 5.509163 CGAATTAATGTACTCCATCCGTCCT 60.509 44.000 0.00 0.00 31.75 3.85
3320 4530 4.684703 CGAATTAATGTACTCCATCCGTCC 59.315 45.833 0.00 0.00 31.75 4.79
3321 4531 4.150098 GCGAATTAATGTACTCCATCCGTC 59.850 45.833 0.00 0.00 31.75 4.79
3322 4532 4.056050 GCGAATTAATGTACTCCATCCGT 58.944 43.478 0.00 0.00 31.75 4.69
3323 4533 4.055360 TGCGAATTAATGTACTCCATCCG 58.945 43.478 0.00 0.00 31.75 4.18
3324 4534 5.758296 TCTTGCGAATTAATGTACTCCATCC 59.242 40.000 0.00 0.00 31.75 3.51
3325 4535 6.844696 TCTTGCGAATTAATGTACTCCATC 57.155 37.500 0.00 0.00 31.75 3.51
3326 4536 7.624360 TTTCTTGCGAATTAATGTACTCCAT 57.376 32.000 0.00 0.00 34.36 3.41
3327 4537 7.624360 ATTTCTTGCGAATTAATGTACTCCA 57.376 32.000 0.00 0.00 0.00 3.86
3328 4538 8.827677 AGTATTTCTTGCGAATTAATGTACTCC 58.172 33.333 0.00 0.00 0.00 3.85
3447 4658 6.150140 GCAATTATCTGTGAGAAGTGGACTTT 59.850 38.462 4.93 0.00 36.11 2.66
3460 4671 2.083774 ACACCGGTGCAATTATCTGTG 58.916 47.619 34.26 6.39 0.00 3.66
3467 4678 0.396435 TCTCTCACACCGGTGCAATT 59.604 50.000 34.26 12.50 44.87 2.32
3474 4685 3.491619 CCTTATGACATCTCTCACACCGG 60.492 52.174 0.00 0.00 0.00 5.28
3497 4708 3.847671 TGTGGGGGAAAAACATTTTCC 57.152 42.857 21.04 21.04 45.47 3.13
3498 4709 7.809546 TTATTTGTGGGGGAAAAACATTTTC 57.190 32.000 6.96 6.96 0.00 2.29
3499 4710 8.637099 CATTTATTTGTGGGGGAAAAACATTTT 58.363 29.630 0.00 0.00 0.00 1.82
3565 5053 4.862641 ATTGCCACCTAATTACAGTCCT 57.137 40.909 0.00 0.00 0.00 3.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.