Multiple sequence alignment - TraesCS4D01G206200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G206200 chr4D 100.000 2813 0 0 1 2813 353921435 353924247 0.000000e+00 5195
1 TraesCS4D01G206200 chr4D 88.506 87 10 0 1980 2066 24764247 24764333 3.830000e-19 106
2 TraesCS4D01G206200 chr4B 96.406 1280 33 3 687 1956 437403742 437405018 0.000000e+00 2097
3 TraesCS4D01G206200 chr4B 87.578 322 31 7 1961 2280 437405245 437405559 5.730000e-97 364
4 TraesCS4D01G206200 chr4A 95.629 572 25 0 798 1369 111054820 111054249 0.000000e+00 918
5 TraesCS4D01G206200 chr4A 97.566 493 12 0 1359 1851 111054154 111053662 0.000000e+00 845
6 TraesCS4D01G206200 chr4A 90.909 121 10 1 688 807 111055043 111054923 8.060000e-36 161
7 TraesCS4D01G206200 chr3A 97.015 536 15 1 2278 2813 729767825 729768359 0.000000e+00 900
8 TraesCS4D01G206200 chr3A 95.149 536 25 1 2278 2813 463110582 463111116 0.000000e+00 845
9 TraesCS4D01G206200 chr1D 97.009 535 15 1 2279 2813 460905261 460904728 0.000000e+00 898
10 TraesCS4D01G206200 chr1D 91.954 87 7 0 1980 2066 445096526 445096440 3.810000e-24 122
11 TraesCS4D01G206200 chr1D 89.744 78 8 0 1989 2066 378302671 378302594 1.780000e-17 100
12 TraesCS4D01G206200 chr2D 96.828 536 16 1 2278 2813 11018603 11019137 0.000000e+00 894
13 TraesCS4D01G206200 chr2D 85.922 206 24 5 2078 2280 329148079 329147876 6.100000e-52 215
14 TraesCS4D01G206200 chr7A 96.642 536 17 1 2278 2813 59437392 59436858 0.000000e+00 889
15 TraesCS4D01G206200 chr7A 89.655 87 9 0 1980 2066 17602600 17602514 8.240000e-21 111
16 TraesCS4D01G206200 chr5B 96.089 537 16 4 2278 2813 119118019 119118551 0.000000e+00 870
17 TraesCS4D01G206200 chr5B 95.149 536 24 2 2278 2813 17770148 17769615 0.000000e+00 845
18 TraesCS4D01G206200 chr2A 95.522 536 23 1 2278 2813 554074430 554073896 0.000000e+00 856
19 TraesCS4D01G206200 chr2A 85.068 221 23 10 2065 2280 435577882 435577667 1.700000e-52 217
20 TraesCS4D01G206200 chr7D 95.336 536 24 1 2278 2813 550858258 550857724 0.000000e+00 850
21 TraesCS4D01G206200 chr7D 86.425 221 20 8 2064 2280 460525324 460525538 1.680000e-57 233
22 TraesCS4D01G206200 chr7D 88.372 86 10 0 1981 2066 189258752 189258837 1.380000e-18 104
23 TraesCS4D01G206200 chr5A 85.973 221 24 7 2065 2280 115703616 115703834 2.180000e-56 230
24 TraesCS4D01G206200 chr6B 85.135 222 24 9 2065 2280 656291084 656290866 4.720000e-53 219
25 TraesCS4D01G206200 chr6B 84.862 218 25 8 2065 2276 527580277 527580492 2.200000e-51 213
26 TraesCS4D01G206200 chr6B 89.655 87 8 1 1981 2066 599079707 599079621 2.960000e-20 110
27 TraesCS4D01G206200 chr6B 88.372 86 10 0 1981 2066 113587632 113587547 1.380000e-18 104
28 TraesCS4D01G206200 chr5D 87.113 194 19 6 2082 2271 448852259 448852450 6.100000e-52 215
29 TraesCS4D01G206200 chr3B 84.071 226 28 8 2061 2280 458404497 458404274 7.890000e-51 211
30 TraesCS4D01G206200 chr1A 88.372 86 10 0 1981 2066 399487633 399487548 1.380000e-18 104
31 TraesCS4D01G206200 chr6D 87.356 87 11 0 1980 2066 15773135 15773221 1.780000e-17 100


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G206200 chr4D 353921435 353924247 2812 False 5195.000000 5195 100.000000 1 2813 1 chr4D.!!$F2 2812
1 TraesCS4D01G206200 chr4B 437403742 437405559 1817 False 1230.500000 2097 91.992000 687 2280 2 chr4B.!!$F1 1593
2 TraesCS4D01G206200 chr4A 111053662 111055043 1381 True 641.333333 918 94.701333 688 1851 3 chr4A.!!$R1 1163
3 TraesCS4D01G206200 chr3A 729767825 729768359 534 False 900.000000 900 97.015000 2278 2813 1 chr3A.!!$F2 535
4 TraesCS4D01G206200 chr3A 463110582 463111116 534 False 845.000000 845 95.149000 2278 2813 1 chr3A.!!$F1 535
5 TraesCS4D01G206200 chr1D 460904728 460905261 533 True 898.000000 898 97.009000 2279 2813 1 chr1D.!!$R3 534
6 TraesCS4D01G206200 chr2D 11018603 11019137 534 False 894.000000 894 96.828000 2278 2813 1 chr2D.!!$F1 535
7 TraesCS4D01G206200 chr7A 59436858 59437392 534 True 889.000000 889 96.642000 2278 2813 1 chr7A.!!$R2 535
8 TraesCS4D01G206200 chr5B 119118019 119118551 532 False 870.000000 870 96.089000 2278 2813 1 chr5B.!!$F1 535
9 TraesCS4D01G206200 chr5B 17769615 17770148 533 True 845.000000 845 95.149000 2278 2813 1 chr5B.!!$R1 535
10 TraesCS4D01G206200 chr2A 554073896 554074430 534 True 856.000000 856 95.522000 2278 2813 1 chr2A.!!$R2 535
11 TraesCS4D01G206200 chr7D 550857724 550858258 534 True 850.000000 850 95.336000 2278 2813 1 chr7D.!!$R1 535

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
656 657 0.032615 TGGTCAAACAGGCAGGGTTT 60.033 50.0 0.0 0.0 38.92 3.27 F
659 660 0.106918 TCAAACAGGCAGGGTTTCGT 60.107 50.0 0.0 0.0 36.38 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1566 1791 0.104304 GGCCGTAGATGGTGACGAAT 59.896 55.0 0.0 0.0 41.6 3.34 R
2163 2611 0.252239 GGGGCTTTTGGGTGGATCTT 60.252 55.0 0.0 0.0 0.0 2.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 3.699894 CCCGCCTCTGTGAGCTGT 61.700 66.667 0.00 0.00 0.00 4.40
28 29 2.351244 CCCGCCTCTGTGAGCTGTA 61.351 63.158 0.00 0.00 0.00 2.74
29 30 1.680522 CCCGCCTCTGTGAGCTGTAT 61.681 60.000 0.00 0.00 0.00 2.29
30 31 0.176680 CCGCCTCTGTGAGCTGTATT 59.823 55.000 0.00 0.00 0.00 1.89
31 32 1.565305 CGCCTCTGTGAGCTGTATTC 58.435 55.000 0.00 0.00 0.00 1.75
32 33 1.804372 CGCCTCTGTGAGCTGTATTCC 60.804 57.143 0.00 0.00 0.00 3.01
33 34 1.474143 GCCTCTGTGAGCTGTATTCCC 60.474 57.143 0.00 0.00 0.00 3.97
34 35 2.114616 CCTCTGTGAGCTGTATTCCCT 58.885 52.381 0.00 0.00 0.00 4.20
35 36 2.102252 CCTCTGTGAGCTGTATTCCCTC 59.898 54.545 0.00 0.00 0.00 4.30
36 37 2.762887 CTCTGTGAGCTGTATTCCCTCA 59.237 50.000 0.00 0.00 33.53 3.86
37 38 2.762887 TCTGTGAGCTGTATTCCCTCAG 59.237 50.000 0.00 0.00 36.38 3.35
38 39 2.499289 CTGTGAGCTGTATTCCCTCAGT 59.501 50.000 0.00 0.00 36.38 3.41
39 40 3.701542 CTGTGAGCTGTATTCCCTCAGTA 59.298 47.826 0.00 0.00 36.38 2.74
40 41 3.701542 TGTGAGCTGTATTCCCTCAGTAG 59.298 47.826 0.00 0.00 36.38 2.57
41 42 3.702045 GTGAGCTGTATTCCCTCAGTAGT 59.298 47.826 0.00 0.00 36.38 2.73
42 43 3.701542 TGAGCTGTATTCCCTCAGTAGTG 59.298 47.826 0.00 0.00 34.57 2.74
43 44 3.034635 AGCTGTATTCCCTCAGTAGTGG 58.965 50.000 0.00 0.00 34.57 4.00
45 46 2.103263 CTGTATTCCCTCAGTAGTGGGC 59.897 54.545 0.00 0.00 46.13 5.36
46 47 1.416772 GTATTCCCTCAGTAGTGGGCC 59.583 57.143 0.00 0.00 46.13 5.80
47 48 1.338136 ATTCCCTCAGTAGTGGGCCG 61.338 60.000 0.00 0.00 46.13 6.13
48 49 2.363795 CCCTCAGTAGTGGGCCGA 60.364 66.667 0.00 0.00 41.35 5.54
49 50 2.722201 CCCTCAGTAGTGGGCCGAC 61.722 68.421 10.38 10.38 41.35 4.79
50 51 1.982395 CCTCAGTAGTGGGCCGACA 60.982 63.158 20.91 3.28 0.00 4.35
51 52 1.215647 CTCAGTAGTGGGCCGACAC 59.784 63.158 20.91 15.12 41.63 3.67
52 53 1.532078 TCAGTAGTGGGCCGACACA 60.532 57.895 20.91 4.30 43.72 3.72
53 54 0.902984 TCAGTAGTGGGCCGACACAT 60.903 55.000 20.91 1.73 43.72 3.21
54 55 0.036388 CAGTAGTGGGCCGACACATT 60.036 55.000 20.91 1.34 43.72 2.71
55 56 0.690762 AGTAGTGGGCCGACACATTT 59.309 50.000 20.91 0.93 43.72 2.32
56 57 1.903860 AGTAGTGGGCCGACACATTTA 59.096 47.619 20.91 0.00 43.72 1.40
57 58 2.093658 AGTAGTGGGCCGACACATTTAG 60.094 50.000 20.91 0.00 43.72 1.85
58 59 0.690762 AGTGGGCCGACACATTTAGT 59.309 50.000 20.91 0.00 43.72 2.24
59 60 1.073284 AGTGGGCCGACACATTTAGTT 59.927 47.619 20.91 0.00 43.72 2.24
60 61 1.883926 GTGGGCCGACACATTTAGTTT 59.116 47.619 13.75 0.00 40.99 2.66
61 62 2.295070 GTGGGCCGACACATTTAGTTTT 59.705 45.455 13.75 0.00 40.99 2.43
62 63 2.959707 TGGGCCGACACATTTAGTTTTT 59.040 40.909 0.00 0.00 0.00 1.94
63 64 3.004944 TGGGCCGACACATTTAGTTTTTC 59.995 43.478 0.00 0.00 0.00 2.29
64 65 3.254903 GGGCCGACACATTTAGTTTTTCT 59.745 43.478 0.00 0.00 0.00 2.52
65 66 4.261867 GGGCCGACACATTTAGTTTTTCTT 60.262 41.667 0.00 0.00 0.00 2.52
66 67 5.286438 GGCCGACACATTTAGTTTTTCTTT 58.714 37.500 0.00 0.00 0.00 2.52
67 68 5.751509 GGCCGACACATTTAGTTTTTCTTTT 59.248 36.000 0.00 0.00 0.00 2.27
68 69 6.919115 GGCCGACACATTTAGTTTTTCTTTTA 59.081 34.615 0.00 0.00 0.00 1.52
69 70 7.597369 GGCCGACACATTTAGTTTTTCTTTTAT 59.403 33.333 0.00 0.00 0.00 1.40
70 71 8.974408 GCCGACACATTTAGTTTTTCTTTTATT 58.026 29.630 0.00 0.00 0.00 1.40
94 95 7.706100 TTGTGTTGGTAACTTTTTAGAAGGT 57.294 32.000 0.00 0.00 37.61 3.50
95 96 7.706100 TGTGTTGGTAACTTTTTAGAAGGTT 57.294 32.000 0.00 0.00 38.45 3.50
96 97 7.764331 TGTGTTGGTAACTTTTTAGAAGGTTC 58.236 34.615 0.00 0.00 36.58 3.62
97 98 7.148035 TGTGTTGGTAACTTTTTAGAAGGTTCC 60.148 37.037 0.00 1.05 36.58 3.62
98 99 6.890814 TGTTGGTAACTTTTTAGAAGGTTCCA 59.109 34.615 0.00 0.00 36.58 3.53
99 100 7.562088 TGTTGGTAACTTTTTAGAAGGTTCCAT 59.438 33.333 0.17 0.00 36.58 3.41
100 101 7.754851 TGGTAACTTTTTAGAAGGTTCCATC 57.245 36.000 0.00 0.00 36.58 3.51
101 102 7.523415 TGGTAACTTTTTAGAAGGTTCCATCT 58.477 34.615 0.00 2.26 36.58 2.90
102 103 8.662255 TGGTAACTTTTTAGAAGGTTCCATCTA 58.338 33.333 0.00 0.42 36.58 1.98
103 104 9.163899 GGTAACTTTTTAGAAGGTTCCATCTAG 57.836 37.037 0.00 0.00 36.58 2.43
104 105 9.722184 GTAACTTTTTAGAAGGTTCCATCTAGT 57.278 33.333 0.00 0.00 36.58 2.57
106 107 9.642343 AACTTTTTAGAAGGTTCCATCTAGTTT 57.358 29.630 4.41 0.00 30.11 2.66
107 108 9.642343 ACTTTTTAGAAGGTTCCATCTAGTTTT 57.358 29.630 4.41 0.00 30.33 2.43
127 128 5.476091 TTTTTGGTTGGTTGTTTCTCTGT 57.524 34.783 0.00 0.00 0.00 3.41
128 129 5.476091 TTTTGGTTGGTTGTTTCTCTGTT 57.524 34.783 0.00 0.00 0.00 3.16
129 130 5.476091 TTTGGTTGGTTGTTTCTCTGTTT 57.524 34.783 0.00 0.00 0.00 2.83
130 131 5.476091 TTGGTTGGTTGTTTCTCTGTTTT 57.524 34.783 0.00 0.00 0.00 2.43
131 132 5.476091 TGGTTGGTTGTTTCTCTGTTTTT 57.524 34.783 0.00 0.00 0.00 1.94
205 206 5.477607 TTTTCAGTTCCCGATTACTCTCA 57.522 39.130 0.00 0.00 0.00 3.27
206 207 5.477607 TTTCAGTTCCCGATTACTCTCAA 57.522 39.130 0.00 0.00 0.00 3.02
207 208 5.477607 TTCAGTTCCCGATTACTCTCAAA 57.522 39.130 0.00 0.00 0.00 2.69
208 209 5.677319 TCAGTTCCCGATTACTCTCAAAT 57.323 39.130 0.00 0.00 0.00 2.32
209 210 6.049955 TCAGTTCCCGATTACTCTCAAATT 57.950 37.500 0.00 0.00 0.00 1.82
210 211 6.106673 TCAGTTCCCGATTACTCTCAAATTC 58.893 40.000 0.00 0.00 0.00 2.17
211 212 5.874810 CAGTTCCCGATTACTCTCAAATTCA 59.125 40.000 0.00 0.00 0.00 2.57
212 213 6.540189 CAGTTCCCGATTACTCTCAAATTCAT 59.460 38.462 0.00 0.00 0.00 2.57
213 214 6.763610 AGTTCCCGATTACTCTCAAATTCATC 59.236 38.462 0.00 0.00 0.00 2.92
214 215 6.233905 TCCCGATTACTCTCAAATTCATCA 57.766 37.500 0.00 0.00 0.00 3.07
215 216 6.049149 TCCCGATTACTCTCAAATTCATCAC 58.951 40.000 0.00 0.00 0.00 3.06
216 217 5.817296 CCCGATTACTCTCAAATTCATCACA 59.183 40.000 0.00 0.00 0.00 3.58
217 218 6.484643 CCCGATTACTCTCAAATTCATCACAT 59.515 38.462 0.00 0.00 0.00 3.21
218 219 7.012704 CCCGATTACTCTCAAATTCATCACATT 59.987 37.037 0.00 0.00 0.00 2.71
219 220 8.400947 CCGATTACTCTCAAATTCATCACATTT 58.599 33.333 0.00 0.00 0.00 2.32
220 221 9.778993 CGATTACTCTCAAATTCATCACATTTT 57.221 29.630 0.00 0.00 0.00 1.82
225 226 9.820725 ACTCTCAAATTCATCACATTTTTGAAA 57.179 25.926 0.00 0.00 36.27 2.69
229 230 8.710551 TCAAATTCATCACATTTTTGAAATCCG 58.289 29.630 0.00 0.00 34.39 4.18
230 231 8.497554 CAAATTCATCACATTTTTGAAATCCGT 58.502 29.630 0.00 0.00 33.45 4.69
231 232 8.606040 AATTCATCACATTTTTGAAATCCGTT 57.394 26.923 0.00 0.00 33.45 4.44
232 233 9.703892 AATTCATCACATTTTTGAAATCCGTTA 57.296 25.926 0.00 0.00 33.45 3.18
233 234 9.703892 ATTCATCACATTTTTGAAATCCGTTAA 57.296 25.926 0.00 0.00 33.45 2.01
234 235 8.514136 TCATCACATTTTTGAAATCCGTTAAC 57.486 30.769 0.00 0.00 0.00 2.01
235 236 8.138074 TCATCACATTTTTGAAATCCGTTAACA 58.862 29.630 6.39 0.00 0.00 2.41
236 237 8.924691 CATCACATTTTTGAAATCCGTTAACAT 58.075 29.630 6.39 0.00 0.00 2.71
237 238 8.291888 TCACATTTTTGAAATCCGTTAACATG 57.708 30.769 6.39 0.00 0.00 3.21
238 239 7.923344 TCACATTTTTGAAATCCGTTAACATGT 59.077 29.630 6.39 0.00 0.00 3.21
239 240 8.547069 CACATTTTTGAAATCCGTTAACATGTT 58.453 29.630 16.68 16.68 0.00 2.71
240 241 9.103861 ACATTTTTGAAATCCGTTAACATGTTT 57.896 25.926 17.78 0.95 0.00 2.83
241 242 9.928236 CATTTTTGAAATCCGTTAACATGTTTT 57.072 25.926 17.78 2.50 0.00 2.43
243 244 8.703604 TTTTGAAATCCGTTAACATGTTTTCA 57.296 26.923 17.78 14.93 31.77 2.69
244 245 8.703604 TTTGAAATCCGTTAACATGTTTTCAA 57.296 26.923 23.63 23.63 38.87 2.69
245 246 8.879342 TTGAAATCCGTTAACATGTTTTCAAT 57.121 26.923 23.63 2.17 36.94 2.57
246 247 8.879342 TGAAATCCGTTAACATGTTTTCAATT 57.121 26.923 17.78 8.01 30.98 2.32
247 248 9.319143 TGAAATCCGTTAACATGTTTTCAATTT 57.681 25.926 17.78 15.10 30.98 1.82
248 249 9.791838 GAAATCCGTTAACATGTTTTCAATTTC 57.208 29.630 17.78 18.71 0.00 2.17
249 250 8.879342 AATCCGTTAACATGTTTTCAATTTCA 57.121 26.923 17.78 0.00 0.00 2.69
250 251 7.922505 TCCGTTAACATGTTTTCAATTTCAG 57.077 32.000 17.78 0.00 0.00 3.02
251 252 6.920758 TCCGTTAACATGTTTTCAATTTCAGG 59.079 34.615 17.78 6.47 0.00 3.86
252 253 6.920758 CCGTTAACATGTTTTCAATTTCAGGA 59.079 34.615 17.78 0.00 0.00 3.86
253 254 7.598493 CCGTTAACATGTTTTCAATTTCAGGAT 59.402 33.333 17.78 0.00 0.00 3.24
254 255 8.977505 CGTTAACATGTTTTCAATTTCAGGATT 58.022 29.630 17.78 0.00 0.00 3.01
286 287 8.900511 ATTCATGAACTTGTATCAATTTCGTG 57.099 30.769 11.07 19.30 35.43 4.35
287 288 7.665561 TCATGAACTTGTATCAATTTCGTGA 57.334 32.000 21.79 21.79 39.01 4.35
288 289 8.093659 TCATGAACTTGTATCAATTTCGTGAA 57.906 30.769 22.63 13.36 38.60 3.18
289 290 8.729756 TCATGAACTTGTATCAATTTCGTGAAT 58.270 29.630 22.63 6.33 38.60 2.57
290 291 9.986833 CATGAACTTGTATCAATTTCGTGAATA 57.013 29.630 20.05 1.96 35.93 1.75
437 438 4.919774 TTTTAGAATAGGGTGCTGGTGA 57.080 40.909 0.00 0.00 0.00 4.02
438 439 4.487714 TTTAGAATAGGGTGCTGGTGAG 57.512 45.455 0.00 0.00 0.00 3.51
439 440 0.543749 AGAATAGGGTGCTGGTGAGC 59.456 55.000 0.00 0.00 46.44 4.26
447 448 2.959071 GCTGGTGAGCGAGCGATC 60.959 66.667 0.61 0.61 36.76 3.69
448 449 2.491621 CTGGTGAGCGAGCGATCA 59.508 61.111 6.75 6.75 38.28 2.92
449 450 1.153765 CTGGTGAGCGAGCGATCAA 60.154 57.895 12.62 0.00 42.40 2.57
450 451 0.737367 CTGGTGAGCGAGCGATCAAA 60.737 55.000 12.62 3.77 42.40 2.69
451 452 0.737367 TGGTGAGCGAGCGATCAAAG 60.737 55.000 12.62 0.00 42.40 2.77
452 453 0.737715 GGTGAGCGAGCGATCAAAGT 60.738 55.000 12.62 0.00 42.40 2.66
453 454 0.368227 GTGAGCGAGCGATCAAAGTG 59.632 55.000 12.62 0.00 42.40 3.16
454 455 0.243636 TGAGCGAGCGATCAAAGTGA 59.756 50.000 8.49 0.00 37.61 3.41
455 456 0.919981 GAGCGAGCGATCAAAGTGAG 59.080 55.000 0.00 0.00 0.00 3.51
456 457 1.080995 AGCGAGCGATCAAAGTGAGC 61.081 55.000 0.00 0.00 0.00 4.26
472 473 3.279875 GCGGATGCTAAAGGGCCG 61.280 66.667 0.00 0.00 44.47 6.13
473 474 3.279875 CGGATGCTAAAGGGCCGC 61.280 66.667 0.00 0.00 35.17 6.53
474 475 3.279875 GGATGCTAAAGGGCCGCG 61.280 66.667 0.00 0.00 0.00 6.46
475 476 2.203015 GATGCTAAAGGGCCGCGA 60.203 61.111 8.23 0.00 0.00 5.87
476 477 2.513897 ATGCTAAAGGGCCGCGAC 60.514 61.111 8.23 0.00 0.00 5.19
477 478 4.770874 TGCTAAAGGGCCGCGACC 62.771 66.667 8.23 4.68 0.00 4.79
479 480 2.511600 CTAAAGGGCCGCGACCTG 60.512 66.667 20.54 7.07 42.44 4.00
480 481 4.770874 TAAAGGGCCGCGACCTGC 62.771 66.667 20.54 9.65 42.44 4.85
489 490 4.014065 GCGACCTGCGTAGAATCC 57.986 61.111 0.53 0.00 43.41 3.01
490 491 1.944676 GCGACCTGCGTAGAATCCG 60.945 63.158 0.53 0.98 43.41 4.18
491 492 1.432251 CGACCTGCGTAGAATCCGT 59.568 57.895 0.53 0.00 34.64 4.69
492 493 0.866061 CGACCTGCGTAGAATCCGTG 60.866 60.000 0.53 0.00 34.64 4.94
493 494 0.172803 GACCTGCGTAGAATCCGTGT 59.827 55.000 0.53 0.00 0.00 4.49
494 495 0.108804 ACCTGCGTAGAATCCGTGTG 60.109 55.000 0.53 0.00 0.00 3.82
495 496 0.108804 CCTGCGTAGAATCCGTGTGT 60.109 55.000 0.53 0.00 0.00 3.72
496 497 0.992072 CTGCGTAGAATCCGTGTGTG 59.008 55.000 0.00 0.00 0.00 3.82
497 498 1.011968 TGCGTAGAATCCGTGTGTGC 61.012 55.000 0.00 0.00 0.00 4.57
498 499 1.988409 CGTAGAATCCGTGTGTGCG 59.012 57.895 0.00 0.00 0.00 5.34
499 500 1.708027 GTAGAATCCGTGTGTGCGC 59.292 57.895 0.00 0.00 0.00 6.09
500 501 0.736325 GTAGAATCCGTGTGTGCGCT 60.736 55.000 9.73 0.00 0.00 5.92
501 502 0.037697 TAGAATCCGTGTGTGCGCTT 60.038 50.000 9.73 0.00 0.00 4.68
502 503 1.154413 GAATCCGTGTGTGCGCTTG 60.154 57.895 9.73 0.00 0.00 4.01
503 504 3.254014 AATCCGTGTGTGCGCTTGC 62.254 57.895 9.73 0.00 39.78 4.01
506 507 4.671549 CGTGTGTGCGCTTGCCAG 62.672 66.667 9.73 0.00 38.03 4.85
507 508 3.585990 GTGTGTGCGCTTGCCAGT 61.586 61.111 9.73 0.00 38.03 4.00
508 509 3.585020 TGTGTGCGCTTGCCAGTG 61.585 61.111 9.73 0.00 38.03 3.66
509 510 3.279116 GTGTGCGCTTGCCAGTGA 61.279 61.111 9.73 0.00 38.03 3.41
510 511 2.281692 TGTGCGCTTGCCAGTGAT 60.282 55.556 9.73 0.00 38.03 3.06
511 512 1.898094 TGTGCGCTTGCCAGTGATT 60.898 52.632 9.73 0.00 38.03 2.57
512 513 1.154150 GTGCGCTTGCCAGTGATTC 60.154 57.895 9.73 0.00 38.03 2.52
513 514 1.600356 TGCGCTTGCCAGTGATTCA 60.600 52.632 9.73 0.00 38.03 2.57
514 515 1.171549 TGCGCTTGCCAGTGATTCAA 61.172 50.000 9.73 0.00 38.03 2.69
515 516 0.730494 GCGCTTGCCAGTGATTCAAC 60.730 55.000 0.00 0.00 31.42 3.18
516 517 0.453282 CGCTTGCCAGTGATTCAACG 60.453 55.000 0.00 0.00 31.42 4.10
517 518 0.593128 GCTTGCCAGTGATTCAACGT 59.407 50.000 0.00 0.00 0.00 3.99
518 519 1.400242 GCTTGCCAGTGATTCAACGTC 60.400 52.381 0.00 0.00 0.00 4.34
519 520 2.146342 CTTGCCAGTGATTCAACGTCT 58.854 47.619 0.00 0.00 0.00 4.18
520 521 3.325870 CTTGCCAGTGATTCAACGTCTA 58.674 45.455 0.00 0.00 0.00 2.59
521 522 3.610040 TGCCAGTGATTCAACGTCTAT 57.390 42.857 0.00 0.00 0.00 1.98
522 523 3.521560 TGCCAGTGATTCAACGTCTATC 58.478 45.455 0.00 0.00 0.00 2.08
523 524 3.195610 TGCCAGTGATTCAACGTCTATCT 59.804 43.478 0.00 0.00 0.00 1.98
524 525 4.401202 TGCCAGTGATTCAACGTCTATCTA 59.599 41.667 0.00 0.00 0.00 1.98
525 526 5.069119 TGCCAGTGATTCAACGTCTATCTAT 59.931 40.000 0.00 0.00 0.00 1.98
526 527 6.264518 TGCCAGTGATTCAACGTCTATCTATA 59.735 38.462 0.00 0.00 0.00 1.31
527 528 7.039714 TGCCAGTGATTCAACGTCTATCTATAT 60.040 37.037 0.00 0.00 0.00 0.86
528 529 7.815068 GCCAGTGATTCAACGTCTATCTATATT 59.185 37.037 0.00 0.00 0.00 1.28
529 530 9.347934 CCAGTGATTCAACGTCTATCTATATTC 57.652 37.037 0.00 0.00 0.00 1.75
536 537 9.780186 TTCAACGTCTATCTATATTCTCTCTCA 57.220 33.333 0.00 0.00 0.00 3.27
537 538 9.780186 TCAACGTCTATCTATATTCTCTCTCAA 57.220 33.333 0.00 0.00 0.00 3.02
546 547 7.254137 TCTATATTCTCTCTCAATATGCACGC 58.746 38.462 0.00 0.00 30.59 5.34
547 548 3.525268 TTCTCTCTCAATATGCACGCA 57.475 42.857 0.00 0.00 0.00 5.24
548 549 3.740631 TCTCTCTCAATATGCACGCAT 57.259 42.857 9.82 9.82 40.19 4.73
549 550 3.646946 TCTCTCTCAATATGCACGCATC 58.353 45.455 7.99 0.00 37.82 3.91
550 551 2.735663 CTCTCTCAATATGCACGCATCC 59.264 50.000 7.99 0.00 37.82 3.51
551 552 1.802960 CTCTCAATATGCACGCATCCC 59.197 52.381 7.99 0.00 37.82 3.85
552 553 1.140652 TCTCAATATGCACGCATCCCA 59.859 47.619 7.99 0.00 37.82 4.37
553 554 1.948834 CTCAATATGCACGCATCCCAA 59.051 47.619 7.99 0.00 37.82 4.12
554 555 1.675483 TCAATATGCACGCATCCCAAC 59.325 47.619 7.99 0.00 37.82 3.77
555 556 1.677576 CAATATGCACGCATCCCAACT 59.322 47.619 7.99 0.00 37.82 3.16
556 557 1.597742 ATATGCACGCATCCCAACTC 58.402 50.000 7.99 0.00 37.82 3.01
557 558 0.251634 TATGCACGCATCCCAACTCA 59.748 50.000 7.99 0.00 37.82 3.41
558 559 0.394762 ATGCACGCATCCCAACTCAT 60.395 50.000 0.00 0.00 29.42 2.90
559 560 1.026182 TGCACGCATCCCAACTCATC 61.026 55.000 0.00 0.00 0.00 2.92
560 561 1.026182 GCACGCATCCCAACTCATCA 61.026 55.000 0.00 0.00 0.00 3.07
561 562 0.729116 CACGCATCCCAACTCATCAC 59.271 55.000 0.00 0.00 0.00 3.06
562 563 0.324614 ACGCATCCCAACTCATCACA 59.675 50.000 0.00 0.00 0.00 3.58
563 564 0.729116 CGCATCCCAACTCATCACAC 59.271 55.000 0.00 0.00 0.00 3.82
564 565 1.825090 GCATCCCAACTCATCACACA 58.175 50.000 0.00 0.00 0.00 3.72
565 566 2.372264 GCATCCCAACTCATCACACAT 58.628 47.619 0.00 0.00 0.00 3.21
566 567 3.544684 GCATCCCAACTCATCACACATA 58.455 45.455 0.00 0.00 0.00 2.29
567 568 3.313526 GCATCCCAACTCATCACACATAC 59.686 47.826 0.00 0.00 0.00 2.39
568 569 3.627395 TCCCAACTCATCACACATACC 57.373 47.619 0.00 0.00 0.00 2.73
569 570 2.909662 TCCCAACTCATCACACATACCA 59.090 45.455 0.00 0.00 0.00 3.25
570 571 3.009723 CCCAACTCATCACACATACCAC 58.990 50.000 0.00 0.00 0.00 4.16
571 572 3.558958 CCCAACTCATCACACATACCACA 60.559 47.826 0.00 0.00 0.00 4.17
572 573 4.264253 CCAACTCATCACACATACCACAT 58.736 43.478 0.00 0.00 0.00 3.21
573 574 4.333649 CCAACTCATCACACATACCACATC 59.666 45.833 0.00 0.00 0.00 3.06
574 575 4.824479 ACTCATCACACATACCACATCA 57.176 40.909 0.00 0.00 0.00 3.07
575 576 5.363562 ACTCATCACACATACCACATCAT 57.636 39.130 0.00 0.00 0.00 2.45
576 577 5.363101 ACTCATCACACATACCACATCATC 58.637 41.667 0.00 0.00 0.00 2.92
577 578 5.104817 ACTCATCACACATACCACATCATCA 60.105 40.000 0.00 0.00 0.00 3.07
578 579 5.743117 TCATCACACATACCACATCATCAA 58.257 37.500 0.00 0.00 0.00 2.57
579 580 6.358991 TCATCACACATACCACATCATCAAT 58.641 36.000 0.00 0.00 0.00 2.57
580 581 6.829811 TCATCACACATACCACATCATCAATT 59.170 34.615 0.00 0.00 0.00 2.32
581 582 6.682423 TCACACATACCACATCATCAATTC 57.318 37.500 0.00 0.00 0.00 2.17
582 583 6.417258 TCACACATACCACATCATCAATTCT 58.583 36.000 0.00 0.00 0.00 2.40
583 584 6.885918 TCACACATACCACATCATCAATTCTT 59.114 34.615 0.00 0.00 0.00 2.52
584 585 8.046107 TCACACATACCACATCATCAATTCTTA 58.954 33.333 0.00 0.00 0.00 2.10
585 586 8.676401 CACACATACCACATCATCAATTCTTAA 58.324 33.333 0.00 0.00 0.00 1.85
586 587 9.412460 ACACATACCACATCATCAATTCTTAAT 57.588 29.630 0.00 0.00 0.00 1.40
587 588 9.673454 CACATACCACATCATCAATTCTTAATG 57.327 33.333 0.00 0.00 0.00 1.90
588 589 8.853126 ACATACCACATCATCAATTCTTAATGG 58.147 33.333 0.00 0.00 0.00 3.16
589 590 8.853126 CATACCACATCATCAATTCTTAATGGT 58.147 33.333 0.00 0.00 39.88 3.55
590 591 7.338800 ACCACATCATCAATTCTTAATGGTC 57.661 36.000 0.00 0.00 31.04 4.02
591 592 6.038603 ACCACATCATCAATTCTTAATGGTCG 59.961 38.462 0.00 0.00 31.04 4.79
592 593 6.038603 CCACATCATCAATTCTTAATGGTCGT 59.961 38.462 0.00 0.00 0.00 4.34
593 594 6.908820 CACATCATCAATTCTTAATGGTCGTG 59.091 38.462 0.00 0.00 0.00 4.35
594 595 6.038603 ACATCATCAATTCTTAATGGTCGTGG 59.961 38.462 0.00 0.00 0.00 4.94
595 596 5.496556 TCATCAATTCTTAATGGTCGTGGT 58.503 37.500 0.00 0.00 0.00 4.16
596 597 5.584649 TCATCAATTCTTAATGGTCGTGGTC 59.415 40.000 0.00 0.00 0.00 4.02
597 598 4.258543 TCAATTCTTAATGGTCGTGGTCC 58.741 43.478 0.00 0.00 0.00 4.46
598 599 3.992943 ATTCTTAATGGTCGTGGTCCA 57.007 42.857 0.00 0.00 39.41 4.02
599 600 3.992943 TTCTTAATGGTCGTGGTCCAT 57.007 42.857 0.00 0.00 46.20 3.41
606 607 4.764050 ATGGTCGTGGTCCATTATAACA 57.236 40.909 0.00 0.00 42.24 2.41
607 608 4.554960 TGGTCGTGGTCCATTATAACAA 57.445 40.909 0.00 0.00 0.00 2.83
608 609 4.907809 TGGTCGTGGTCCATTATAACAAA 58.092 39.130 0.00 0.00 0.00 2.83
609 610 5.502079 TGGTCGTGGTCCATTATAACAAAT 58.498 37.500 0.00 0.00 0.00 2.32
610 611 5.355630 TGGTCGTGGTCCATTATAACAAATG 59.644 40.000 0.00 0.00 36.74 2.32
611 612 5.355910 GGTCGTGGTCCATTATAACAAATGT 59.644 40.000 0.00 0.00 35.48 2.71
612 613 6.127842 GGTCGTGGTCCATTATAACAAATGTT 60.128 38.462 4.01 4.01 41.73 2.71
613 614 7.309920 GTCGTGGTCCATTATAACAAATGTTT 58.690 34.615 3.85 0.00 39.31 2.83
614 615 7.272515 GTCGTGGTCCATTATAACAAATGTTTG 59.727 37.037 3.85 4.04 43.62 2.93
615 616 6.034470 CGTGGTCCATTATAACAAATGTTTGC 59.966 38.462 3.85 0.00 41.79 3.68
616 617 7.096551 GTGGTCCATTATAACAAATGTTTGCT 58.903 34.615 3.85 0.00 41.79 3.91
617 618 8.247562 GTGGTCCATTATAACAAATGTTTGCTA 58.752 33.333 3.85 0.00 41.79 3.49
618 619 8.247562 TGGTCCATTATAACAAATGTTTGCTAC 58.752 33.333 3.85 0.00 41.79 3.58
619 620 7.704899 GGTCCATTATAACAAATGTTTGCTACC 59.295 37.037 3.85 4.12 41.79 3.18
620 621 8.247562 GTCCATTATAACAAATGTTTGCTACCA 58.752 33.333 3.85 0.00 41.79 3.25
621 622 8.247562 TCCATTATAACAAATGTTTGCTACCAC 58.752 33.333 3.85 0.00 41.79 4.16
622 623 7.491048 CCATTATAACAAATGTTTGCTACCACC 59.509 37.037 3.85 0.00 41.79 4.61
623 624 3.363341 AACAAATGTTTGCTACCACCG 57.637 42.857 5.44 0.00 41.79 4.94
624 625 1.611491 ACAAATGTTTGCTACCACCGG 59.389 47.619 0.00 0.00 41.79 5.28
625 626 1.611491 CAAATGTTTGCTACCACCGGT 59.389 47.619 0.00 0.00 40.16 5.28
626 627 1.243902 AATGTTTGCTACCACCGGTG 58.756 50.000 28.26 28.26 36.19 4.94
627 628 0.398696 ATGTTTGCTACCACCGGTGA 59.601 50.000 36.07 16.25 36.19 4.02
628 629 0.533308 TGTTTGCTACCACCGGTGAC 60.533 55.000 36.07 22.92 36.19 3.67
629 630 0.533308 GTTTGCTACCACCGGTGACA 60.533 55.000 36.07 23.15 36.19 3.58
630 631 0.250124 TTTGCTACCACCGGTGACAG 60.250 55.000 36.07 28.74 36.19 3.51
631 632 1.404479 TTGCTACCACCGGTGACAGT 61.404 55.000 36.07 25.68 36.19 3.55
632 633 0.540133 TGCTACCACCGGTGACAGTA 60.540 55.000 36.07 25.48 36.19 2.74
633 634 0.822164 GCTACCACCGGTGACAGTAT 59.178 55.000 36.07 15.14 36.19 2.12
634 635 2.026641 GCTACCACCGGTGACAGTATA 58.973 52.381 36.07 15.44 36.19 1.47
635 636 2.034305 GCTACCACCGGTGACAGTATAG 59.966 54.545 36.07 23.25 36.19 1.31
636 637 0.822164 ACCACCGGTGACAGTATAGC 59.178 55.000 36.07 0.00 32.98 2.97
637 638 1.112113 CCACCGGTGACAGTATAGCT 58.888 55.000 36.07 0.00 0.00 3.32
638 639 3.789346 ACCACCGGTGACAGTATAGCTG 61.789 54.545 36.07 16.18 42.19 4.24
649 650 2.939103 CAGTATAGCTGGTCAAACAGGC 59.061 50.000 0.00 0.00 41.42 4.85
650 651 2.571653 AGTATAGCTGGTCAAACAGGCA 59.428 45.455 0.00 0.00 38.90 4.75
651 652 2.119801 ATAGCTGGTCAAACAGGCAG 57.880 50.000 0.00 0.00 38.90 4.85
652 653 0.036732 TAGCTGGTCAAACAGGCAGG 59.963 55.000 0.00 0.00 38.90 4.85
653 654 2.270986 GCTGGTCAAACAGGCAGGG 61.271 63.158 0.00 0.00 38.90 4.45
654 655 1.151450 CTGGTCAAACAGGCAGGGT 59.849 57.895 0.00 0.00 34.84 4.34
655 656 0.468029 CTGGTCAAACAGGCAGGGTT 60.468 55.000 0.00 0.00 34.84 4.11
656 657 0.032615 TGGTCAAACAGGCAGGGTTT 60.033 50.000 0.00 0.00 38.92 3.27
657 658 0.673985 GGTCAAACAGGCAGGGTTTC 59.326 55.000 0.00 0.00 36.38 2.78
658 659 0.310854 GTCAAACAGGCAGGGTTTCG 59.689 55.000 0.00 0.00 36.38 3.46
659 660 0.106918 TCAAACAGGCAGGGTTTCGT 60.107 50.000 0.00 0.00 36.38 3.85
660 661 1.141254 TCAAACAGGCAGGGTTTCGTA 59.859 47.619 0.00 0.00 36.38 3.43
661 662 2.159382 CAAACAGGCAGGGTTTCGTAT 58.841 47.619 0.00 0.00 36.38 3.06
662 663 2.109425 AACAGGCAGGGTTTCGTATC 57.891 50.000 0.00 0.00 0.00 2.24
663 664 0.981183 ACAGGCAGGGTTTCGTATCA 59.019 50.000 0.00 0.00 0.00 2.15
664 665 1.559682 ACAGGCAGGGTTTCGTATCAT 59.440 47.619 0.00 0.00 0.00 2.45
665 666 2.026262 ACAGGCAGGGTTTCGTATCATT 60.026 45.455 0.00 0.00 0.00 2.57
666 667 2.355756 CAGGCAGGGTTTCGTATCATTG 59.644 50.000 0.00 0.00 0.00 2.82
667 668 2.238646 AGGCAGGGTTTCGTATCATTGA 59.761 45.455 0.00 0.00 0.00 2.57
668 669 3.117888 AGGCAGGGTTTCGTATCATTGAT 60.118 43.478 4.28 4.28 0.00 2.57
669 670 3.632145 GGCAGGGTTTCGTATCATTGATT 59.368 43.478 4.14 0.00 0.00 2.57
670 671 4.498009 GGCAGGGTTTCGTATCATTGATTG 60.498 45.833 4.14 0.00 0.00 2.67
671 672 4.601019 CAGGGTTTCGTATCATTGATTGC 58.399 43.478 4.14 0.00 0.00 3.56
672 673 3.312421 AGGGTTTCGTATCATTGATTGCG 59.688 43.478 4.14 10.11 0.00 4.85
673 674 3.548014 GGGTTTCGTATCATTGATTGCGG 60.548 47.826 17.29 2.99 0.00 5.69
674 675 3.035942 GTTTCGTATCATTGATTGCGGC 58.964 45.455 17.29 0.00 0.00 6.53
675 676 2.238942 TCGTATCATTGATTGCGGCT 57.761 45.000 17.29 0.00 0.00 5.52
676 677 2.560504 TCGTATCATTGATTGCGGCTT 58.439 42.857 17.29 0.00 0.00 4.35
677 678 3.723260 TCGTATCATTGATTGCGGCTTA 58.277 40.909 17.29 0.00 0.00 3.09
678 679 3.493129 TCGTATCATTGATTGCGGCTTAC 59.507 43.478 17.29 3.70 0.00 2.34
679 680 3.247411 CGTATCATTGATTGCGGCTTACA 59.753 43.478 4.14 0.00 0.00 2.41
680 681 4.083855 CGTATCATTGATTGCGGCTTACAT 60.084 41.667 4.14 0.00 0.00 2.29
681 682 3.696281 TCATTGATTGCGGCTTACATG 57.304 42.857 0.00 0.00 0.00 3.21
682 683 3.016031 TCATTGATTGCGGCTTACATGT 58.984 40.909 2.69 2.69 0.00 3.21
683 684 3.065233 TCATTGATTGCGGCTTACATGTC 59.935 43.478 0.00 0.00 0.00 3.06
684 685 2.401583 TGATTGCGGCTTACATGTCT 57.598 45.000 0.00 0.00 0.00 3.41
685 686 2.710377 TGATTGCGGCTTACATGTCTT 58.290 42.857 0.00 0.00 0.00 3.01
686 687 2.677836 TGATTGCGGCTTACATGTCTTC 59.322 45.455 0.00 0.00 0.00 2.87
687 688 1.448985 TTGCGGCTTACATGTCTTCC 58.551 50.000 0.00 0.48 0.00 3.46
688 689 0.392461 TGCGGCTTACATGTCTTCCC 60.392 55.000 0.00 0.00 0.00 3.97
689 690 0.392461 GCGGCTTACATGTCTTCCCA 60.392 55.000 0.00 0.00 0.00 4.37
690 691 1.948611 GCGGCTTACATGTCTTCCCAA 60.949 52.381 0.00 0.00 0.00 4.12
691 692 2.009774 CGGCTTACATGTCTTCCCAAG 58.990 52.381 0.00 0.00 0.00 3.61
706 707 3.496331 TCCCAAGGGAATCAAAACTCAC 58.504 45.455 5.09 0.00 42.05 3.51
712 713 4.593956 AGGGAATCAAAACTCACTGGATC 58.406 43.478 0.00 0.00 0.00 3.36
718 719 2.738846 CAAAACTCACTGGATCCTCACG 59.261 50.000 14.23 1.42 0.00 4.35
792 793 2.976840 GAAATGCCGCGAACCAGCA 61.977 57.895 8.23 8.92 41.50 4.41
794 795 1.876497 AAATGCCGCGAACCAGCAAT 61.876 50.000 8.23 0.00 40.46 3.56
847 960 1.558756 GATATGCCCATCCCTCTCTGG 59.441 57.143 0.00 0.00 0.00 3.86
916 1029 2.223294 CCTCATTCTAGTGTCGACGTCC 60.223 54.545 10.58 1.11 0.00 4.79
961 1074 1.677576 CAGTCAAAGAAAGGCAGCACA 59.322 47.619 0.00 0.00 0.00 4.57
997 1110 1.077501 CTCCCACCATTCGCCACAT 60.078 57.895 0.00 0.00 0.00 3.21
1071 1191 3.207669 CTGCTTCTCGCCATGGCC 61.208 66.667 30.79 15.91 38.05 5.36
1566 1791 1.369692 CAAGGACCAGTACACGCCA 59.630 57.895 0.00 0.00 0.00 5.69
1746 1971 0.976590 ACCCCTTCTACTTCCCGCTC 60.977 60.000 0.00 0.00 0.00 5.03
1890 2115 9.386010 TGCTATTATTATCGTACTTTTGGTGTT 57.614 29.630 0.00 0.00 0.00 3.32
1941 2166 2.032550 AGCTGCATGCACTTAATAAGCG 59.967 45.455 18.46 3.92 45.94 4.68
1956 2181 2.781681 AAGCGGGTGTTATGTAAGCT 57.218 45.000 0.00 0.00 34.70 3.74
1957 2182 2.024176 AGCGGGTGTTATGTAAGCTG 57.976 50.000 0.00 0.00 31.76 4.24
1958 2183 1.278127 AGCGGGTGTTATGTAAGCTGT 59.722 47.619 0.00 0.00 31.76 4.40
1959 2184 2.498481 AGCGGGTGTTATGTAAGCTGTA 59.502 45.455 0.00 0.00 31.76 2.74
1983 2430 9.865484 GTAGAATAAAATTATGAACGAAGCTCC 57.135 33.333 0.00 0.00 0.00 4.70
1987 2434 4.395959 AATTATGAACGAAGCTCCGGTA 57.604 40.909 0.00 0.00 0.00 4.02
1991 2438 1.336517 TGAACGAAGCTCCGGTACTTG 60.337 52.381 14.98 10.28 0.00 3.16
1993 2440 1.080093 CGAAGCTCCGGTACTTGCA 60.080 57.895 14.98 0.00 0.00 4.08
1999 2446 0.038526 CTCCGGTACTTGCAGTCGTT 60.039 55.000 0.00 0.00 0.00 3.85
2057 2505 7.730364 ATTACCTCTGTTGTTCTTTGTACTG 57.270 36.000 0.00 0.00 0.00 2.74
2059 2507 5.497474 ACCTCTGTTGTTCTTTGTACTGTT 58.503 37.500 0.00 0.00 0.00 3.16
2130 2578 2.957680 TGATGCACACAACCATCTTTGT 59.042 40.909 0.00 0.00 40.46 2.83
2132 2580 4.582240 TGATGCACACAACCATCTTTGTTA 59.418 37.500 0.00 0.00 37.62 2.41
2139 2587 8.647226 GCACACAACCATCTTTGTTAATTATTC 58.353 33.333 0.00 0.00 37.62 1.75
2163 2611 6.648725 TCATCGAAGTGTGACAAATGAATACA 59.351 34.615 0.00 0.00 0.00 2.29
2190 2638 0.116342 CCCAAAAGCCCCCTTTAGGT 59.884 55.000 0.00 0.00 40.30 3.08
2198 2646 1.893137 GCCCCCTTTAGGTGAACAAAG 59.107 52.381 0.00 0.00 0.00 2.77
2211 2659 3.427863 GTGAACAAAGTCGCTACACCTAC 59.572 47.826 0.00 0.00 0.00 3.18
2220 2668 5.188434 AGTCGCTACACCTACAAGTATACA 58.812 41.667 5.50 0.00 0.00 2.29
2221 2669 5.296283 AGTCGCTACACCTACAAGTATACAG 59.704 44.000 5.50 0.00 0.00 2.74
2231 2679 5.538813 CCTACAAGTATACAGATGTGCCCTA 59.461 44.000 15.26 0.10 0.00 3.53
2235 2683 4.752063 AGTATACAGATGTGCCCTATCCA 58.248 43.478 5.50 0.00 0.00 3.41
2271 2719 2.501723 TCTAATCCAGTGGCCTGAAGAC 59.498 50.000 3.51 0.00 41.50 3.01
2275 2723 2.111384 TCCAGTGGCCTGAAGACTATC 58.889 52.381 3.51 0.00 41.50 2.08
2299 2747 2.887152 GTTGTCTTGCATGAGACCCTTT 59.113 45.455 14.49 0.00 44.29 3.11
2451 2902 2.086869 CAGGTCGAATCCTTTGTGCAT 58.913 47.619 0.00 0.00 35.37 3.96
2479 2930 9.533253 GAGGTAGCGTTGGTATTAAAGTTAATA 57.467 33.333 0.33 0.33 35.20 0.98
2549 3000 1.633432 TCCCATGTCACCGATCCTTTT 59.367 47.619 0.00 0.00 0.00 2.27
2670 3121 2.795175 ATCCTACAATACGCAGACGG 57.205 50.000 0.00 0.00 46.04 4.79
2689 3140 5.184864 AGACGGCACAATTATTTTCATGGAA 59.815 36.000 0.00 0.00 0.00 3.53
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
10 11 1.680522 ATACAGCTCACAGAGGCGGG 61.681 60.000 0.00 0.00 0.00 6.13
11 12 0.176680 AATACAGCTCACAGAGGCGG 59.823 55.000 0.00 0.00 0.00 6.13
12 13 1.565305 GAATACAGCTCACAGAGGCG 58.435 55.000 0.00 0.00 0.00 5.52
13 14 1.474143 GGGAATACAGCTCACAGAGGC 60.474 57.143 0.00 0.00 0.00 4.70
14 15 2.102252 GAGGGAATACAGCTCACAGAGG 59.898 54.545 0.00 0.00 0.00 3.69
15 16 2.762887 TGAGGGAATACAGCTCACAGAG 59.237 50.000 0.00 0.00 0.00 3.35
16 17 2.762887 CTGAGGGAATACAGCTCACAGA 59.237 50.000 0.00 0.00 0.00 3.41
17 18 2.499289 ACTGAGGGAATACAGCTCACAG 59.501 50.000 0.00 0.00 37.61 3.66
18 19 2.540383 ACTGAGGGAATACAGCTCACA 58.460 47.619 0.00 0.00 37.61 3.58
19 20 3.702045 ACTACTGAGGGAATACAGCTCAC 59.298 47.826 0.00 0.00 37.61 3.51
20 21 3.701542 CACTACTGAGGGAATACAGCTCA 59.298 47.826 0.00 0.00 37.61 4.26
21 22 3.068873 CCACTACTGAGGGAATACAGCTC 59.931 52.174 0.00 0.00 37.61 4.09
22 23 3.034635 CCACTACTGAGGGAATACAGCT 58.965 50.000 0.00 0.00 37.61 4.24
23 24 2.103263 CCCACTACTGAGGGAATACAGC 59.897 54.545 0.00 0.00 45.48 4.40
24 25 2.103263 GCCCACTACTGAGGGAATACAG 59.897 54.545 0.79 0.00 45.48 2.74
25 26 2.116238 GCCCACTACTGAGGGAATACA 58.884 52.381 0.79 0.00 45.48 2.29
26 27 1.416772 GGCCCACTACTGAGGGAATAC 59.583 57.143 0.79 0.00 45.48 1.89
27 28 1.802553 GGCCCACTACTGAGGGAATA 58.197 55.000 0.79 0.00 45.48 1.75
28 29 1.338136 CGGCCCACTACTGAGGGAAT 61.338 60.000 0.00 0.00 45.48 3.01
29 30 1.987855 CGGCCCACTACTGAGGGAA 60.988 63.158 0.00 0.00 45.48 3.97
30 31 2.363795 CGGCCCACTACTGAGGGA 60.364 66.667 0.00 0.00 45.48 4.20
31 32 2.363795 TCGGCCCACTACTGAGGG 60.364 66.667 0.00 0.00 45.42 4.30
32 33 1.982395 TGTCGGCCCACTACTGAGG 60.982 63.158 1.09 0.00 0.00 3.86
33 34 1.215647 GTGTCGGCCCACTACTGAG 59.784 63.158 1.09 0.00 32.50 3.35
34 35 0.902984 ATGTGTCGGCCCACTACTGA 60.903 55.000 12.61 0.00 36.30 3.41
35 36 0.036388 AATGTGTCGGCCCACTACTG 60.036 55.000 12.61 0.00 36.30 2.74
36 37 0.690762 AAATGTGTCGGCCCACTACT 59.309 50.000 12.61 0.00 36.30 2.57
37 38 2.277084 CTAAATGTGTCGGCCCACTAC 58.723 52.381 12.61 5.18 36.30 2.73
38 39 1.903860 ACTAAATGTGTCGGCCCACTA 59.096 47.619 12.61 0.00 36.30 2.74
39 40 0.690762 ACTAAATGTGTCGGCCCACT 59.309 50.000 12.61 0.00 36.30 4.00
40 41 1.530323 AACTAAATGTGTCGGCCCAC 58.470 50.000 5.26 5.26 35.86 4.61
41 42 2.279935 AAACTAAATGTGTCGGCCCA 57.720 45.000 0.00 0.00 0.00 5.36
42 43 3.254903 AGAAAAACTAAATGTGTCGGCCC 59.745 43.478 0.00 0.00 0.00 5.80
43 44 4.499037 AGAAAAACTAAATGTGTCGGCC 57.501 40.909 0.00 0.00 0.00 6.13
44 45 6.822073 AAAAGAAAAACTAAATGTGTCGGC 57.178 33.333 0.00 0.00 0.00 5.54
68 69 8.755028 ACCTTCTAAAAAGTTACCAACACAAAT 58.245 29.630 0.00 0.00 0.00 2.32
69 70 8.124808 ACCTTCTAAAAAGTTACCAACACAAA 57.875 30.769 0.00 0.00 0.00 2.83
70 71 7.706100 ACCTTCTAAAAAGTTACCAACACAA 57.294 32.000 0.00 0.00 0.00 3.33
71 72 7.148035 GGAACCTTCTAAAAAGTTACCAACACA 60.148 37.037 0.00 0.00 0.00 3.72
72 73 7.148035 TGGAACCTTCTAAAAAGTTACCAACAC 60.148 37.037 0.00 0.00 0.00 3.32
73 74 6.890814 TGGAACCTTCTAAAAAGTTACCAACA 59.109 34.615 0.00 0.00 0.00 3.33
74 75 7.337480 TGGAACCTTCTAAAAAGTTACCAAC 57.663 36.000 0.00 0.00 0.00 3.77
75 76 8.002459 AGATGGAACCTTCTAAAAAGTTACCAA 58.998 33.333 7.35 0.00 28.68 3.67
76 77 7.523415 AGATGGAACCTTCTAAAAAGTTACCA 58.477 34.615 7.35 0.00 0.00 3.25
77 78 7.997773 AGATGGAACCTTCTAAAAAGTTACC 57.002 36.000 7.35 0.00 0.00 2.85
78 79 9.722184 ACTAGATGGAACCTTCTAAAAAGTTAC 57.278 33.333 14.41 0.00 33.99 2.50
80 81 9.642343 AAACTAGATGGAACCTTCTAAAAAGTT 57.358 29.630 14.41 13.46 33.99 2.66
81 82 9.642343 AAAACTAGATGGAACCTTCTAAAAAGT 57.358 29.630 14.41 9.59 33.99 2.66
105 106 5.476091 ACAGAGAAACAACCAACCAAAAA 57.524 34.783 0.00 0.00 0.00 1.94
106 107 5.476091 AACAGAGAAACAACCAACCAAAA 57.524 34.783 0.00 0.00 0.00 2.44
107 108 5.476091 AAACAGAGAAACAACCAACCAAA 57.524 34.783 0.00 0.00 0.00 3.28
108 109 5.476091 AAAACAGAGAAACAACCAACCAA 57.524 34.783 0.00 0.00 0.00 3.67
109 110 5.476091 AAAAACAGAGAAACAACCAACCA 57.524 34.783 0.00 0.00 0.00 3.67
187 188 5.874810 TGAATTTGAGAGTAATCGGGAACTG 59.125 40.000 0.00 0.00 0.00 3.16
188 189 6.049955 TGAATTTGAGAGTAATCGGGAACT 57.950 37.500 0.00 0.00 0.00 3.01
189 190 6.538742 TGATGAATTTGAGAGTAATCGGGAAC 59.461 38.462 0.00 0.00 0.00 3.62
190 191 6.538742 GTGATGAATTTGAGAGTAATCGGGAA 59.461 38.462 0.00 0.00 0.00 3.97
191 192 6.049149 GTGATGAATTTGAGAGTAATCGGGA 58.951 40.000 0.00 0.00 0.00 5.14
192 193 5.817296 TGTGATGAATTTGAGAGTAATCGGG 59.183 40.000 0.00 0.00 0.00 5.14
193 194 6.908870 TGTGATGAATTTGAGAGTAATCGG 57.091 37.500 0.00 0.00 0.00 4.18
194 195 9.778993 AAAATGTGATGAATTTGAGAGTAATCG 57.221 29.630 0.00 0.00 0.00 3.34
199 200 9.820725 TTTCAAAAATGTGATGAATTTGAGAGT 57.179 25.926 0.00 0.00 40.07 3.24
203 204 8.710551 CGGATTTCAAAAATGTGATGAATTTGA 58.289 29.630 0.00 0.00 38.00 2.69
204 205 8.497554 ACGGATTTCAAAAATGTGATGAATTTG 58.502 29.630 0.00 0.00 33.45 2.32
205 206 8.606040 ACGGATTTCAAAAATGTGATGAATTT 57.394 26.923 0.00 0.00 33.45 1.82
206 207 8.606040 AACGGATTTCAAAAATGTGATGAATT 57.394 26.923 0.00 0.00 33.45 2.17
207 208 9.703892 TTAACGGATTTCAAAAATGTGATGAAT 57.296 25.926 0.00 0.00 33.45 2.57
208 209 8.973378 GTTAACGGATTTCAAAAATGTGATGAA 58.027 29.630 0.00 0.00 0.00 2.57
209 210 8.138074 TGTTAACGGATTTCAAAAATGTGATGA 58.862 29.630 0.26 0.00 0.00 2.92
210 211 8.291888 TGTTAACGGATTTCAAAAATGTGATG 57.708 30.769 0.26 0.00 0.00 3.07
211 212 8.924691 CATGTTAACGGATTTCAAAAATGTGAT 58.075 29.630 0.26 0.00 0.00 3.06
212 213 7.923344 ACATGTTAACGGATTTCAAAAATGTGA 59.077 29.630 0.26 0.00 0.00 3.58
213 214 8.071122 ACATGTTAACGGATTTCAAAAATGTG 57.929 30.769 0.26 0.00 0.00 3.21
214 215 8.655651 AACATGTTAACGGATTTCAAAAATGT 57.344 26.923 9.97 0.00 0.00 2.71
215 216 9.928236 AAAACATGTTAACGGATTTCAAAAATG 57.072 25.926 12.39 0.00 0.00 2.32
217 218 9.151471 TGAAAACATGTTAACGGATTTCAAAAA 57.849 25.926 21.96 8.54 33.74 1.94
218 219 8.703604 TGAAAACATGTTAACGGATTTCAAAA 57.296 26.923 21.96 8.77 33.74 2.44
219 220 8.703604 TTGAAAACATGTTAACGGATTTCAAA 57.296 26.923 27.05 18.35 40.36 2.69
220 221 8.879342 ATTGAAAACATGTTAACGGATTTCAA 57.121 26.923 28.98 28.98 44.46 2.69
221 222 8.879342 AATTGAAAACATGTTAACGGATTTCA 57.121 26.923 21.09 21.09 34.55 2.69
222 223 9.791838 GAAATTGAAAACATGTTAACGGATTTC 57.208 29.630 12.39 19.35 0.00 2.17
223 224 9.319143 TGAAATTGAAAACATGTTAACGGATTT 57.681 25.926 12.39 16.17 0.00 2.17
224 225 8.879342 TGAAATTGAAAACATGTTAACGGATT 57.121 26.923 12.39 0.58 0.00 3.01
225 226 7.598493 CCTGAAATTGAAAACATGTTAACGGAT 59.402 33.333 12.39 5.00 0.00 4.18
226 227 6.920758 CCTGAAATTGAAAACATGTTAACGGA 59.079 34.615 12.39 2.97 0.00 4.69
227 228 6.920758 TCCTGAAATTGAAAACATGTTAACGG 59.079 34.615 12.39 4.43 0.00 4.44
228 229 7.922505 TCCTGAAATTGAAAACATGTTAACG 57.077 32.000 12.39 0.00 0.00 3.18
260 261 9.345517 CACGAAATTGATACAAGTTCATGAATT 57.654 29.630 12.12 4.21 0.00 2.17
261 262 8.729756 TCACGAAATTGATACAAGTTCATGAAT 58.270 29.630 16.53 0.00 26.35 2.57
262 263 8.093659 TCACGAAATTGATACAAGTTCATGAA 57.906 30.769 16.53 3.38 26.35 2.57
263 264 7.665561 TCACGAAATTGATACAAGTTCATGA 57.334 32.000 15.46 15.46 26.64 3.07
264 265 8.900511 ATTCACGAAATTGATACAAGTTCATG 57.099 30.769 19.23 15.83 0.00 3.07
415 416 5.249780 TCACCAGCACCCTATTCTAAAAA 57.750 39.130 0.00 0.00 0.00 1.94
416 417 4.843728 CTCACCAGCACCCTATTCTAAAA 58.156 43.478 0.00 0.00 0.00 1.52
417 418 3.370527 GCTCACCAGCACCCTATTCTAAA 60.371 47.826 0.00 0.00 46.06 1.85
418 419 2.170607 GCTCACCAGCACCCTATTCTAA 59.829 50.000 0.00 0.00 46.06 2.10
419 420 1.762957 GCTCACCAGCACCCTATTCTA 59.237 52.381 0.00 0.00 46.06 2.10
420 421 0.543749 GCTCACCAGCACCCTATTCT 59.456 55.000 0.00 0.00 46.06 2.40
421 422 3.086733 GCTCACCAGCACCCTATTC 57.913 57.895 0.00 0.00 46.06 1.75
430 431 2.959071 GATCGCTCGCTCACCAGC 60.959 66.667 0.00 0.00 42.96 4.85
431 432 0.737367 TTTGATCGCTCGCTCACCAG 60.737 55.000 0.00 0.00 0.00 4.00
432 433 0.737367 CTTTGATCGCTCGCTCACCA 60.737 55.000 0.00 0.00 0.00 4.17
433 434 0.737715 ACTTTGATCGCTCGCTCACC 60.738 55.000 0.00 0.00 0.00 4.02
434 435 0.368227 CACTTTGATCGCTCGCTCAC 59.632 55.000 0.00 0.00 0.00 3.51
435 436 0.243636 TCACTTTGATCGCTCGCTCA 59.756 50.000 0.00 0.00 0.00 4.26
436 437 0.919981 CTCACTTTGATCGCTCGCTC 59.080 55.000 0.00 0.00 0.00 5.03
437 438 1.080995 GCTCACTTTGATCGCTCGCT 61.081 55.000 0.00 0.00 0.00 4.93
438 439 1.346538 GCTCACTTTGATCGCTCGC 59.653 57.895 0.00 0.00 0.00 5.03
439 440 1.627943 CGCTCACTTTGATCGCTCG 59.372 57.895 0.00 0.00 29.19 5.03
440 441 0.458543 TCCGCTCACTTTGATCGCTC 60.459 55.000 0.00 0.00 34.99 5.03
441 442 0.176680 ATCCGCTCACTTTGATCGCT 59.823 50.000 0.00 0.00 34.99 4.93
442 443 0.302890 CATCCGCTCACTTTGATCGC 59.697 55.000 0.00 0.00 34.99 4.58
443 444 0.302890 GCATCCGCTCACTTTGATCG 59.697 55.000 0.00 0.00 35.96 3.69
455 456 3.279875 CGGCCCTTTAGCATCCGC 61.280 66.667 0.00 0.00 38.99 5.54
456 457 3.279875 GCGGCCCTTTAGCATCCG 61.280 66.667 0.00 0.00 42.68 4.18
457 458 3.279875 CGCGGCCCTTTAGCATCC 61.280 66.667 0.00 0.00 0.00 3.51
458 459 2.203015 TCGCGGCCCTTTAGCATC 60.203 61.111 6.13 0.00 0.00 3.91
459 460 2.513897 GTCGCGGCCCTTTAGCAT 60.514 61.111 6.13 0.00 0.00 3.79
460 461 4.770874 GGTCGCGGCCCTTTAGCA 62.771 66.667 21.86 0.00 0.00 3.49
461 462 4.468689 AGGTCGCGGCCCTTTAGC 62.469 66.667 29.22 4.14 0.00 3.09
462 463 2.511600 CAGGTCGCGGCCCTTTAG 60.512 66.667 29.22 7.81 0.00 1.85
463 464 4.770874 GCAGGTCGCGGCCCTTTA 62.771 66.667 29.22 0.00 0.00 1.85
472 473 1.944676 CGGATTCTACGCAGGTCGC 60.945 63.158 0.00 0.00 43.23 5.19
473 474 0.866061 CACGGATTCTACGCAGGTCG 60.866 60.000 0.00 0.00 45.38 4.79
474 475 0.172803 ACACGGATTCTACGCAGGTC 59.827 55.000 0.00 0.00 34.00 3.85
475 476 0.108804 CACACGGATTCTACGCAGGT 60.109 55.000 0.00 0.00 34.00 4.00
476 477 0.108804 ACACACGGATTCTACGCAGG 60.109 55.000 0.00 0.00 34.00 4.85
477 478 0.992072 CACACACGGATTCTACGCAG 59.008 55.000 0.00 0.00 34.00 5.18
478 479 1.011968 GCACACACGGATTCTACGCA 61.012 55.000 0.00 0.00 34.00 5.24
479 480 1.708027 GCACACACGGATTCTACGC 59.292 57.895 0.00 0.00 34.00 4.42
480 481 1.988409 CGCACACACGGATTCTACG 59.012 57.895 0.00 0.00 37.36 3.51
481 482 0.736325 AGCGCACACACGGATTCTAC 60.736 55.000 11.47 0.00 0.00 2.59
482 483 0.037697 AAGCGCACACACGGATTCTA 60.038 50.000 11.47 0.00 0.00 2.10
483 484 1.301716 AAGCGCACACACGGATTCT 60.302 52.632 11.47 0.00 0.00 2.40
484 485 1.154413 CAAGCGCACACACGGATTC 60.154 57.895 11.47 0.00 0.00 2.52
485 486 2.945984 CAAGCGCACACACGGATT 59.054 55.556 11.47 0.00 0.00 3.01
486 487 3.726517 GCAAGCGCACACACGGAT 61.727 61.111 11.47 0.00 38.36 4.18
489 490 4.671549 CTGGCAAGCGCACACACG 62.672 66.667 11.47 0.00 41.24 4.49
490 491 3.585990 ACTGGCAAGCGCACACAC 61.586 61.111 11.47 0.00 41.24 3.82
491 492 3.585020 CACTGGCAAGCGCACACA 61.585 61.111 11.47 1.59 41.24 3.72
492 493 2.133742 AATCACTGGCAAGCGCACAC 62.134 55.000 11.47 0.00 41.24 3.82
493 494 1.855213 GAATCACTGGCAAGCGCACA 61.855 55.000 11.47 1.59 41.24 4.57
494 495 1.154150 GAATCACTGGCAAGCGCAC 60.154 57.895 11.47 0.00 41.24 5.34
495 496 1.171549 TTGAATCACTGGCAAGCGCA 61.172 50.000 11.47 0.00 41.24 6.09
496 497 0.730494 GTTGAATCACTGGCAAGCGC 60.730 55.000 0.00 0.00 37.44 5.92
497 498 0.453282 CGTTGAATCACTGGCAAGCG 60.453 55.000 0.00 0.00 0.00 4.68
498 499 0.593128 ACGTTGAATCACTGGCAAGC 59.407 50.000 0.00 0.00 0.00 4.01
499 500 2.146342 AGACGTTGAATCACTGGCAAG 58.854 47.619 0.00 0.00 0.00 4.01
500 501 2.254546 AGACGTTGAATCACTGGCAA 57.745 45.000 0.00 0.00 0.00 4.52
501 502 3.195610 AGATAGACGTTGAATCACTGGCA 59.804 43.478 0.00 0.00 0.00 4.92
502 503 3.786635 AGATAGACGTTGAATCACTGGC 58.213 45.455 0.00 0.00 0.00 4.85
503 504 9.347934 GAATATAGATAGACGTTGAATCACTGG 57.652 37.037 0.00 0.00 0.00 4.00
510 511 9.780186 TGAGAGAGAATATAGATAGACGTTGAA 57.220 33.333 0.00 0.00 0.00 2.69
511 512 9.780186 TTGAGAGAGAATATAGATAGACGTTGA 57.220 33.333 0.00 0.00 0.00 3.18
520 521 7.920151 GCGTGCATATTGAGAGAGAATATAGAT 59.080 37.037 0.00 0.00 0.00 1.98
521 522 7.094205 TGCGTGCATATTGAGAGAGAATATAGA 60.094 37.037 0.00 0.00 0.00 1.98
522 523 7.031975 TGCGTGCATATTGAGAGAGAATATAG 58.968 38.462 0.00 0.00 0.00 1.31
523 524 6.924111 TGCGTGCATATTGAGAGAGAATATA 58.076 36.000 0.00 0.00 0.00 0.86
524 525 5.787380 TGCGTGCATATTGAGAGAGAATAT 58.213 37.500 0.00 0.00 0.00 1.28
525 526 5.200368 TGCGTGCATATTGAGAGAGAATA 57.800 39.130 0.00 0.00 0.00 1.75
526 527 4.063998 TGCGTGCATATTGAGAGAGAAT 57.936 40.909 0.00 0.00 0.00 2.40
527 528 3.525268 TGCGTGCATATTGAGAGAGAA 57.475 42.857 0.00 0.00 0.00 2.87
528 529 3.553715 GGATGCGTGCATATTGAGAGAGA 60.554 47.826 7.42 0.00 36.70 3.10
529 530 2.735663 GGATGCGTGCATATTGAGAGAG 59.264 50.000 7.42 0.00 36.70 3.20
530 531 2.548707 GGGATGCGTGCATATTGAGAGA 60.549 50.000 7.42 0.00 36.70 3.10
531 532 1.802960 GGGATGCGTGCATATTGAGAG 59.197 52.381 7.42 0.00 36.70 3.20
532 533 1.140652 TGGGATGCGTGCATATTGAGA 59.859 47.619 7.42 0.00 36.70 3.27
533 534 1.596603 TGGGATGCGTGCATATTGAG 58.403 50.000 7.42 0.00 36.70 3.02
534 535 1.675483 GTTGGGATGCGTGCATATTGA 59.325 47.619 7.42 0.00 36.70 2.57
535 536 1.677576 AGTTGGGATGCGTGCATATTG 59.322 47.619 7.42 0.00 36.70 1.90
536 537 1.949525 GAGTTGGGATGCGTGCATATT 59.050 47.619 7.42 0.00 36.70 1.28
537 538 1.134128 TGAGTTGGGATGCGTGCATAT 60.134 47.619 7.42 0.00 36.70 1.78
538 539 0.251634 TGAGTTGGGATGCGTGCATA 59.748 50.000 7.42 0.00 36.70 3.14
539 540 0.394762 ATGAGTTGGGATGCGTGCAT 60.395 50.000 7.12 7.12 39.69 3.96
540 541 1.002257 ATGAGTTGGGATGCGTGCA 60.002 52.632 0.00 0.00 0.00 4.57
541 542 1.026182 TGATGAGTTGGGATGCGTGC 61.026 55.000 0.00 0.00 0.00 5.34
542 543 0.729116 GTGATGAGTTGGGATGCGTG 59.271 55.000 0.00 0.00 0.00 5.34
543 544 0.324614 TGTGATGAGTTGGGATGCGT 59.675 50.000 0.00 0.00 0.00 5.24
544 545 0.729116 GTGTGATGAGTTGGGATGCG 59.271 55.000 0.00 0.00 0.00 4.73
545 546 1.825090 TGTGTGATGAGTTGGGATGC 58.175 50.000 0.00 0.00 0.00 3.91
546 547 3.879295 GGTATGTGTGATGAGTTGGGATG 59.121 47.826 0.00 0.00 0.00 3.51
547 548 3.523157 TGGTATGTGTGATGAGTTGGGAT 59.477 43.478 0.00 0.00 0.00 3.85
548 549 2.909662 TGGTATGTGTGATGAGTTGGGA 59.090 45.455 0.00 0.00 0.00 4.37
549 550 3.009723 GTGGTATGTGTGATGAGTTGGG 58.990 50.000 0.00 0.00 0.00 4.12
550 551 3.673902 TGTGGTATGTGTGATGAGTTGG 58.326 45.455 0.00 0.00 0.00 3.77
551 552 4.937015 TGATGTGGTATGTGTGATGAGTTG 59.063 41.667 0.00 0.00 0.00 3.16
552 553 5.164620 TGATGTGGTATGTGTGATGAGTT 57.835 39.130 0.00 0.00 0.00 3.01
553 554 4.824479 TGATGTGGTATGTGTGATGAGT 57.176 40.909 0.00 0.00 0.00 3.41
554 555 5.362263 TGATGATGTGGTATGTGTGATGAG 58.638 41.667 0.00 0.00 0.00 2.90
555 556 5.356291 TGATGATGTGGTATGTGTGATGA 57.644 39.130 0.00 0.00 0.00 2.92
556 557 6.628919 ATTGATGATGTGGTATGTGTGATG 57.371 37.500 0.00 0.00 0.00 3.07
557 558 7.058525 AGAATTGATGATGTGGTATGTGTGAT 58.941 34.615 0.00 0.00 0.00 3.06
558 559 6.417258 AGAATTGATGATGTGGTATGTGTGA 58.583 36.000 0.00 0.00 0.00 3.58
559 560 6.688637 AGAATTGATGATGTGGTATGTGTG 57.311 37.500 0.00 0.00 0.00 3.82
560 561 8.806429 TTAAGAATTGATGATGTGGTATGTGT 57.194 30.769 0.00 0.00 0.00 3.72
561 562 9.673454 CATTAAGAATTGATGATGTGGTATGTG 57.327 33.333 0.00 0.00 44.00 3.21
562 563 8.853126 CCATTAAGAATTGATGATGTGGTATGT 58.147 33.333 0.00 0.00 44.00 2.29
563 564 8.853126 ACCATTAAGAATTGATGATGTGGTATG 58.147 33.333 0.00 0.00 44.00 2.39
564 565 9.071276 GACCATTAAGAATTGATGATGTGGTAT 57.929 33.333 0.00 0.00 44.00 2.73
565 566 7.226523 CGACCATTAAGAATTGATGATGTGGTA 59.773 37.037 0.00 0.00 44.00 3.25
566 567 6.038603 CGACCATTAAGAATTGATGATGTGGT 59.961 38.462 0.00 0.00 44.00 4.16
567 568 6.038603 ACGACCATTAAGAATTGATGATGTGG 59.961 38.462 0.00 0.00 44.00 4.17
568 569 6.908820 CACGACCATTAAGAATTGATGATGTG 59.091 38.462 0.00 0.00 44.00 3.21
569 570 6.038603 CCACGACCATTAAGAATTGATGATGT 59.961 38.462 0.00 0.00 44.00 3.06
570 571 6.038603 ACCACGACCATTAAGAATTGATGATG 59.961 38.462 0.00 0.00 44.00 3.07
571 572 6.122277 ACCACGACCATTAAGAATTGATGAT 58.878 36.000 0.00 0.00 44.00 2.45
572 573 5.496556 ACCACGACCATTAAGAATTGATGA 58.503 37.500 0.00 0.00 44.00 2.92
573 574 5.220854 GGACCACGACCATTAAGAATTGATG 60.221 44.000 0.00 0.00 41.28 3.07
574 575 4.881850 GGACCACGACCATTAAGAATTGAT 59.118 41.667 0.00 0.00 0.00 2.57
575 576 4.258543 GGACCACGACCATTAAGAATTGA 58.741 43.478 0.00 0.00 0.00 2.57
576 577 4.006989 TGGACCACGACCATTAAGAATTG 58.993 43.478 0.00 0.00 32.03 2.32
577 578 4.295141 TGGACCACGACCATTAAGAATT 57.705 40.909 0.00 0.00 32.03 2.17
578 579 3.992943 TGGACCACGACCATTAAGAAT 57.007 42.857 0.00 0.00 32.03 2.40
579 580 3.992943 ATGGACCACGACCATTAAGAA 57.007 42.857 0.00 0.00 44.51 2.52
586 587 4.554960 TTGTTATAATGGACCACGACCA 57.445 40.909 0.00 0.00 41.83 4.02
587 588 5.355910 ACATTTGTTATAATGGACCACGACC 59.644 40.000 0.00 0.00 39.33 4.79
588 589 6.431198 ACATTTGTTATAATGGACCACGAC 57.569 37.500 0.00 0.00 39.33 4.34
589 590 7.309177 CAAACATTTGTTATAATGGACCACGA 58.691 34.615 0.00 0.00 39.33 4.35
590 591 6.034470 GCAAACATTTGTTATAATGGACCACG 59.966 38.462 0.00 0.00 39.33 4.94
591 592 7.096551 AGCAAACATTTGTTATAATGGACCAC 58.903 34.615 0.00 0.00 39.33 4.16
592 593 7.238486 AGCAAACATTTGTTATAATGGACCA 57.762 32.000 0.00 0.00 39.33 4.02
593 594 7.704899 GGTAGCAAACATTTGTTATAATGGACC 59.295 37.037 6.24 0.03 39.33 4.46
594 595 8.247562 TGGTAGCAAACATTTGTTATAATGGAC 58.752 33.333 6.24 0.00 39.33 4.02
595 596 8.247562 GTGGTAGCAAACATTTGTTATAATGGA 58.752 33.333 0.00 0.00 39.33 3.41
596 597 7.491048 GGTGGTAGCAAACATTTGTTATAATGG 59.509 37.037 0.00 0.00 39.33 3.16
597 598 7.219917 CGGTGGTAGCAAACATTTGTTATAATG 59.780 37.037 0.00 0.00 40.24 1.90
598 599 7.254852 CGGTGGTAGCAAACATTTGTTATAAT 58.745 34.615 0.00 0.00 40.24 1.28
599 600 6.349445 CCGGTGGTAGCAAACATTTGTTATAA 60.349 38.462 0.00 0.00 40.24 0.98
600 601 5.124138 CCGGTGGTAGCAAACATTTGTTATA 59.876 40.000 0.00 0.00 40.24 0.98
601 602 4.082463 CCGGTGGTAGCAAACATTTGTTAT 60.082 41.667 0.00 0.00 40.24 1.89
602 603 3.253677 CCGGTGGTAGCAAACATTTGTTA 59.746 43.478 0.00 1.88 40.24 2.41
603 604 2.035321 CCGGTGGTAGCAAACATTTGTT 59.965 45.455 0.00 2.84 40.24 2.83
604 605 1.611491 CCGGTGGTAGCAAACATTTGT 59.389 47.619 0.00 0.00 40.24 2.83
605 606 1.611491 ACCGGTGGTAGCAAACATTTG 59.389 47.619 6.12 0.00 36.21 2.32
606 607 1.611491 CACCGGTGGTAGCAAACATTT 59.389 47.619 27.57 0.00 32.11 2.32
607 608 1.202830 TCACCGGTGGTAGCAAACATT 60.203 47.619 33.40 0.00 32.11 2.71
608 609 0.398696 TCACCGGTGGTAGCAAACAT 59.601 50.000 33.40 0.00 32.11 2.71
609 610 0.533308 GTCACCGGTGGTAGCAAACA 60.533 55.000 33.40 8.84 32.11 2.83
610 611 0.533308 TGTCACCGGTGGTAGCAAAC 60.533 55.000 33.40 21.96 32.11 2.93
611 612 0.250124 CTGTCACCGGTGGTAGCAAA 60.250 55.000 33.40 10.46 32.11 3.68
612 613 1.369692 CTGTCACCGGTGGTAGCAA 59.630 57.895 33.40 11.27 32.11 3.91
613 614 0.540133 TACTGTCACCGGTGGTAGCA 60.540 55.000 33.40 23.48 32.11 3.49
614 615 0.822164 ATACTGTCACCGGTGGTAGC 59.178 55.000 33.40 20.52 32.11 3.58
615 616 2.034305 GCTATACTGTCACCGGTGGTAG 59.966 54.545 33.40 29.57 32.11 3.18
616 617 2.026641 GCTATACTGTCACCGGTGGTA 58.973 52.381 33.40 25.92 32.11 3.25
617 618 0.822164 GCTATACTGTCACCGGTGGT 59.178 55.000 33.40 24.68 35.62 4.16
618 619 1.112113 AGCTATACTGTCACCGGTGG 58.888 55.000 33.40 20.25 0.00 4.61
619 620 1.202417 CCAGCTATACTGTCACCGGTG 60.202 57.143 29.26 29.26 45.68 4.94
620 621 1.112113 CCAGCTATACTGTCACCGGT 58.888 55.000 0.00 0.00 45.68 5.28
621 622 1.067212 GACCAGCTATACTGTCACCGG 59.933 57.143 0.00 0.00 45.68 5.28
622 623 1.749063 TGACCAGCTATACTGTCACCG 59.251 52.381 0.00 0.00 45.68 4.94
623 624 3.887621 TTGACCAGCTATACTGTCACC 57.112 47.619 0.00 0.00 45.68 4.02
624 625 4.566004 TGTTTGACCAGCTATACTGTCAC 58.434 43.478 0.00 0.00 45.68 3.67
625 626 4.322725 CCTGTTTGACCAGCTATACTGTCA 60.323 45.833 0.00 0.00 45.68 3.58
626 627 4.184629 CCTGTTTGACCAGCTATACTGTC 58.815 47.826 0.00 0.00 45.68 3.51
627 628 3.619979 GCCTGTTTGACCAGCTATACTGT 60.620 47.826 0.00 0.00 45.68 3.55
628 629 2.939103 GCCTGTTTGACCAGCTATACTG 59.061 50.000 0.00 0.00 46.77 2.74
629 630 2.571653 TGCCTGTTTGACCAGCTATACT 59.428 45.455 0.00 0.00 0.00 2.12
630 631 2.939103 CTGCCTGTTTGACCAGCTATAC 59.061 50.000 0.00 0.00 0.00 1.47
631 632 2.092968 CCTGCCTGTTTGACCAGCTATA 60.093 50.000 0.00 0.00 0.00 1.31
632 633 1.340405 CCTGCCTGTTTGACCAGCTAT 60.340 52.381 0.00 0.00 0.00 2.97
633 634 0.036732 CCTGCCTGTTTGACCAGCTA 59.963 55.000 0.00 0.00 0.00 3.32
634 635 1.228367 CCTGCCTGTTTGACCAGCT 60.228 57.895 0.00 0.00 0.00 4.24
635 636 2.270986 CCCTGCCTGTTTGACCAGC 61.271 63.158 0.00 0.00 0.00 4.85
636 637 0.468029 AACCCTGCCTGTTTGACCAG 60.468 55.000 0.00 0.00 0.00 4.00
637 638 0.032615 AAACCCTGCCTGTTTGACCA 60.033 50.000 0.00 0.00 34.77 4.02
638 639 0.673985 GAAACCCTGCCTGTTTGACC 59.326 55.000 0.72 0.00 36.13 4.02
639 640 0.310854 CGAAACCCTGCCTGTTTGAC 59.689 55.000 0.72 0.00 36.13 3.18
640 641 0.106918 ACGAAACCCTGCCTGTTTGA 60.107 50.000 0.00 0.00 36.13 2.69
641 642 1.600023 TACGAAACCCTGCCTGTTTG 58.400 50.000 0.00 0.00 36.13 2.93
642 643 2.224670 TGATACGAAACCCTGCCTGTTT 60.225 45.455 0.00 0.00 38.57 2.83
643 644 1.349688 TGATACGAAACCCTGCCTGTT 59.650 47.619 0.00 0.00 0.00 3.16
644 645 0.981183 TGATACGAAACCCTGCCTGT 59.019 50.000 0.00 0.00 0.00 4.00
645 646 2.332063 ATGATACGAAACCCTGCCTG 57.668 50.000 0.00 0.00 0.00 4.85
646 647 2.238646 TCAATGATACGAAACCCTGCCT 59.761 45.455 0.00 0.00 0.00 4.75
647 648 2.639065 TCAATGATACGAAACCCTGCC 58.361 47.619 0.00 0.00 0.00 4.85
648 649 4.601019 CAATCAATGATACGAAACCCTGC 58.399 43.478 0.00 0.00 0.00 4.85
649 650 4.601019 GCAATCAATGATACGAAACCCTG 58.399 43.478 0.00 0.00 0.00 4.45
650 651 3.312421 CGCAATCAATGATACGAAACCCT 59.688 43.478 11.63 0.00 0.00 4.34
651 652 3.548014 CCGCAATCAATGATACGAAACCC 60.548 47.826 16.82 0.00 0.00 4.11
652 653 3.617669 CCGCAATCAATGATACGAAACC 58.382 45.455 16.82 0.00 0.00 3.27
653 654 3.035942 GCCGCAATCAATGATACGAAAC 58.964 45.455 16.82 5.68 0.00 2.78
654 655 2.942376 AGCCGCAATCAATGATACGAAA 59.058 40.909 16.82 0.00 0.00 3.46
655 656 2.560504 AGCCGCAATCAATGATACGAA 58.439 42.857 16.82 0.00 0.00 3.85
656 657 2.238942 AGCCGCAATCAATGATACGA 57.761 45.000 16.82 0.00 0.00 3.43
657 658 3.247411 TGTAAGCCGCAATCAATGATACG 59.753 43.478 10.47 10.47 0.00 3.06
658 659 4.811555 TGTAAGCCGCAATCAATGATAC 57.188 40.909 0.00 0.00 0.00 2.24
659 660 4.821260 ACATGTAAGCCGCAATCAATGATA 59.179 37.500 0.00 0.00 0.00 2.15
660 661 3.633525 ACATGTAAGCCGCAATCAATGAT 59.366 39.130 0.00 0.00 0.00 2.45
661 662 3.016031 ACATGTAAGCCGCAATCAATGA 58.984 40.909 0.00 0.00 0.00 2.57
662 663 3.065786 AGACATGTAAGCCGCAATCAATG 59.934 43.478 0.00 0.00 0.00 2.82
663 664 3.282021 AGACATGTAAGCCGCAATCAAT 58.718 40.909 0.00 0.00 0.00 2.57
664 665 2.710377 AGACATGTAAGCCGCAATCAA 58.290 42.857 0.00 0.00 0.00 2.57
665 666 2.401583 AGACATGTAAGCCGCAATCA 57.598 45.000 0.00 0.00 0.00 2.57
666 667 2.032178 GGAAGACATGTAAGCCGCAATC 59.968 50.000 0.00 0.00 0.00 2.67
667 668 2.017049 GGAAGACATGTAAGCCGCAAT 58.983 47.619 0.00 0.00 0.00 3.56
668 669 1.448985 GGAAGACATGTAAGCCGCAA 58.551 50.000 0.00 0.00 0.00 4.85
669 670 0.392461 GGGAAGACATGTAAGCCGCA 60.392 55.000 0.00 0.00 0.00 5.69
670 671 0.392461 TGGGAAGACATGTAAGCCGC 60.392 55.000 0.00 0.00 0.00 6.53
671 672 2.009774 CTTGGGAAGACATGTAAGCCG 58.990 52.381 0.00 0.00 0.00 5.52
672 673 2.369394 CCTTGGGAAGACATGTAAGCC 58.631 52.381 0.00 0.00 0.00 4.35
673 674 2.026262 TCCCTTGGGAAGACATGTAAGC 60.026 50.000 5.82 0.00 0.00 3.09
674 675 4.301072 TTCCCTTGGGAAGACATGTAAG 57.699 45.455 16.54 0.00 0.00 2.34
675 676 4.290985 TGATTCCCTTGGGAAGACATGTAA 59.709 41.667 23.48 0.77 0.00 2.41
676 677 3.849574 TGATTCCCTTGGGAAGACATGTA 59.150 43.478 23.48 1.46 0.00 2.29
677 678 2.649312 TGATTCCCTTGGGAAGACATGT 59.351 45.455 23.48 0.00 0.00 3.21
678 679 3.370840 TGATTCCCTTGGGAAGACATG 57.629 47.619 23.48 0.00 0.00 3.21
679 680 4.402616 TTTGATTCCCTTGGGAAGACAT 57.597 40.909 23.48 9.27 0.00 3.06
680 681 3.893753 TTTGATTCCCTTGGGAAGACA 57.106 42.857 23.48 21.20 0.00 3.41
681 682 4.152647 AGTTTTGATTCCCTTGGGAAGAC 58.847 43.478 23.48 19.33 0.00 3.01
682 683 4.141041 TGAGTTTTGATTCCCTTGGGAAGA 60.141 41.667 23.48 11.88 0.00 2.87
683 684 4.021981 GTGAGTTTTGATTCCCTTGGGAAG 60.022 45.833 23.48 0.00 0.00 3.46
684 685 3.895041 GTGAGTTTTGATTCCCTTGGGAA 59.105 43.478 21.85 21.85 0.00 3.97
685 686 3.140144 AGTGAGTTTTGATTCCCTTGGGA 59.860 43.478 3.91 3.91 0.00 4.37
686 687 3.256631 CAGTGAGTTTTGATTCCCTTGGG 59.743 47.826 0.00 0.00 0.00 4.12
687 688 3.256631 CCAGTGAGTTTTGATTCCCTTGG 59.743 47.826 0.00 0.00 0.00 3.61
688 689 4.144297 TCCAGTGAGTTTTGATTCCCTTG 58.856 43.478 0.00 0.00 0.00 3.61
689 690 4.453480 TCCAGTGAGTTTTGATTCCCTT 57.547 40.909 0.00 0.00 0.00 3.95
690 691 4.568592 GGATCCAGTGAGTTTTGATTCCCT 60.569 45.833 6.95 0.00 0.00 4.20
691 692 3.696548 GGATCCAGTGAGTTTTGATTCCC 59.303 47.826 6.95 0.00 0.00 3.97
695 696 4.583871 GTGAGGATCCAGTGAGTTTTGAT 58.416 43.478 15.82 0.00 0.00 2.57
712 713 1.400530 GGGTGGTAGGGATCGTGAGG 61.401 65.000 0.00 0.00 0.00 3.86
718 719 4.747009 GCTTAGAAATGGGTGGTAGGGATC 60.747 50.000 0.00 0.00 0.00 3.36
792 793 5.112686 GCTACTTGCTAGTTGCTACAGATT 58.887 41.667 22.58 0.00 45.70 2.40
794 795 4.111375 GCTACTTGCTAGTTGCTACAGA 57.889 45.455 22.58 0.00 45.70 3.41
961 1074 2.223525 GGAGCTTATAACGAGTGCGAGT 60.224 50.000 0.00 0.00 41.64 4.18
997 1110 2.401583 ACGATTGAGCTTGCCATGTA 57.598 45.000 0.00 0.00 0.00 2.29
1566 1791 0.104304 GGCCGTAGATGGTGACGAAT 59.896 55.000 0.00 0.00 41.60 3.34
1877 2102 9.341899 CTTGCATCTAATAAACACCAAAAGTAC 57.658 33.333 0.00 0.00 0.00 2.73
1881 2106 7.946207 TCACTTGCATCTAATAAACACCAAAA 58.054 30.769 0.00 0.00 0.00 2.44
1890 2115 5.961272 TCACGTCTCACTTGCATCTAATAA 58.039 37.500 0.00 0.00 0.00 1.40
1891 2116 5.576447 TCACGTCTCACTTGCATCTAATA 57.424 39.130 0.00 0.00 0.00 0.98
1892 2117 4.456280 TCACGTCTCACTTGCATCTAAT 57.544 40.909 0.00 0.00 0.00 1.73
1941 2166 8.726870 TTTATTCTACAGCTTACATAACACCC 57.273 34.615 0.00 0.00 0.00 4.61
1957 2182 9.865484 GGAGCTTCGTTCATAATTTTATTCTAC 57.135 33.333 0.00 0.00 0.00 2.59
1958 2183 8.761497 CGGAGCTTCGTTCATAATTTTATTCTA 58.239 33.333 6.14 0.00 0.00 2.10
1959 2184 7.254795 CCGGAGCTTCGTTCATAATTTTATTCT 60.255 37.037 14.59 0.00 0.00 2.40
1993 2440 2.299013 TGTGAACCATCTAGCAACGACT 59.701 45.455 0.00 0.00 0.00 4.18
1999 2446 3.758023 CCATGTTTGTGAACCATCTAGCA 59.242 43.478 0.00 0.00 34.80 3.49
2004 2451 4.320608 ACAACCATGTTTGTGAACCATC 57.679 40.909 7.95 0.00 38.31 3.51
2035 2483 6.229936 ACAGTACAAAGAACAACAGAGGTA 57.770 37.500 0.00 0.00 0.00 3.08
2067 2515 6.123045 AGGTAATCCTCCTTTCGAAGAAAA 57.877 37.500 0.00 0.00 40.67 2.29
2068 2516 5.757099 AGGTAATCCTCCTTTCGAAGAAA 57.243 39.130 0.00 0.00 40.67 2.52
2132 2580 8.729756 TCATTTGTCACACTTCGATGAATAATT 58.270 29.630 5.16 0.00 0.00 1.40
2139 2587 6.830736 TGTATTCATTTGTCACACTTCGATG 58.169 36.000 0.00 0.00 0.00 3.84
2144 2592 7.448161 TGGATCTTGTATTCATTTGTCACACTT 59.552 33.333 0.00 0.00 0.00 3.16
2163 2611 0.252239 GGGGCTTTTGGGTGGATCTT 60.252 55.000 0.00 0.00 0.00 2.40
2190 2638 2.902705 AGGTGTAGCGACTTTGTTCA 57.097 45.000 0.00 0.00 0.00 3.18
2198 2646 5.295292 TCTGTATACTTGTAGGTGTAGCGAC 59.705 44.000 4.17 0.00 0.00 5.19
2211 2659 5.012046 TGGATAGGGCACATCTGTATACTTG 59.988 44.000 4.17 2.39 0.00 3.16
2220 2668 3.716353 TGTTATGTGGATAGGGCACATCT 59.284 43.478 0.00 0.00 39.81 2.90
2221 2669 4.067896 CTGTTATGTGGATAGGGCACATC 58.932 47.826 0.00 0.00 39.81 3.06
2231 2679 7.716998 GGATTAGATTGTGTCTGTTATGTGGAT 59.283 37.037 0.00 0.00 37.83 3.41
2235 2683 7.550551 CACTGGATTAGATTGTGTCTGTTATGT 59.449 37.037 0.00 0.00 37.83 2.29
2271 2719 2.868583 CTCATGCAAGACAACCGGATAG 59.131 50.000 9.46 0.00 0.00 2.08
2275 2723 0.798776 GTCTCATGCAAGACAACCGG 59.201 55.000 12.68 0.00 44.20 5.28
2299 2747 7.158697 TCAAGTTTCTTCGAGTGGATTTCATA 58.841 34.615 0.00 0.00 0.00 2.15
2451 2902 4.223477 ACTTTAATACCAACGCTACCTCCA 59.777 41.667 0.00 0.00 0.00 3.86
2479 2930 7.960738 CGTTTGAAAGTAATGACCAATATCGTT 59.039 33.333 0.00 0.00 0.00 3.85
2523 2974 2.589540 GGTGACATGGGATCGCCA 59.410 61.111 7.38 6.35 44.69 5.69
2670 3121 7.201548 GGTCATGTTCCATGAAAATAATTGTGC 60.202 37.037 8.39 0.00 0.00 4.57
2689 3140 0.602638 TTGCTTTCGCGAGGTCATGT 60.603 50.000 9.59 0.00 39.65 3.21


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.