Multiple sequence alignment - TraesCS4D01G205500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G205500 chr4D 100.000 3139 0 0 1 3139 353039674 353042812 0.000000e+00 5797.0
1 TraesCS4D01G205500 chr4D 96.078 51 2 0 2756 2806 353042327 353042377 2.010000e-12 84.2
2 TraesCS4D01G205500 chr4D 96.078 51 2 0 2654 2704 353042429 353042479 2.010000e-12 84.2
3 TraesCS4D01G205500 chr4B 94.557 1231 50 8 964 2190 436500870 436502087 0.000000e+00 1886.0
4 TraesCS4D01G205500 chr4B 91.580 962 61 8 2186 3139 436502137 436503086 0.000000e+00 1310.0
5 TraesCS4D01G205500 chr4B 93.147 394 17 5 964 1357 436499064 436499447 1.260000e-158 569.0
6 TraesCS4D01G205500 chr4B 93.137 102 7 0 2705 2806 436502600 436502701 1.950000e-32 150.0
7 TraesCS4D01G205500 chr4B 90.196 102 10 0 2654 2755 436502651 436502752 1.960000e-27 134.0
8 TraesCS4D01G205500 chr4B 98.039 51 1 0 2756 2806 436502600 436502650 4.310000e-14 89.8
9 TraesCS4D01G205500 chr4B 92.982 57 4 0 659 715 436498996 436499052 2.010000e-12 84.2
10 TraesCS4D01G205500 chr4B 96.078 51 2 0 2654 2704 436502702 436502752 2.010000e-12 84.2
11 TraesCS4D01G205500 chr4A 92.494 1239 50 14 963 2190 112588148 112586942 0.000000e+00 1733.0
12 TraesCS4D01G205500 chr4A 93.254 504 31 3 230 731 112588648 112588146 0.000000e+00 739.0
13 TraesCS4D01G205500 chr4A 91.753 388 25 3 2426 2806 112585750 112585363 1.660000e-147 532.0
14 TraesCS4D01G205500 chr4A 92.351 353 20 3 2654 3006 112585464 112585119 2.170000e-136 496.0
15 TraesCS4D01G205500 chr4A 88.525 244 20 2 2189 2431 112586889 112586653 3.960000e-74 289.0
16 TraesCS4D01G205500 chr4A 96.667 150 5 0 2990 3139 112585047 112584898 1.870000e-62 250.0
17 TraesCS4D01G205500 chr4A 98.039 51 1 0 2756 2806 112585515 112585465 4.310000e-14 89.8
18 TraesCS4D01G205500 chr4A 96.078 51 2 0 2654 2704 112585362 112585312 2.010000e-12 84.2
19 TraesCS4D01G205500 chr1D 96.137 233 7 2 731 962 21475497 21475728 2.280000e-101 379.0
20 TraesCS4D01G205500 chr3D 96.087 230 8 1 731 959 593684241 593684470 1.060000e-99 374.0
21 TraesCS4D01G205500 chr2A 93.496 246 14 2 726 970 647883142 647882898 6.400000e-97 364.0
22 TraesCS4D01G205500 chr2B 94.737 228 11 1 733 959 580011077 580010850 1.380000e-93 353.0
23 TraesCS4D01G205500 chr3B 93.220 236 14 2 733 966 828797060 828797295 2.320000e-91 346.0
24 TraesCS4D01G205500 chr2D 93.249 237 12 2 731 963 382467613 382467377 2.320000e-91 346.0
25 TraesCS4D01G205500 chr2D 92.672 232 17 0 728 959 532188171 532187940 5.020000e-88 335.0
26 TraesCS4D01G205500 chr5A 92.766 235 16 1 727 960 568697734 568697968 3.880000e-89 339.0
27 TraesCS4D01G205500 chr7D 91.597 238 19 1 727 963 267558154 267557917 8.390000e-86 327.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G205500 chr4D 353039674 353042812 3138 False 1988.466667 5797 97.385333 1 3139 3 chr4D.!!$F1 3138
1 TraesCS4D01G205500 chr4B 436498996 436503086 4090 False 538.400000 1886 93.714500 659 3139 8 chr4B.!!$F1 2480
2 TraesCS4D01G205500 chr4A 112584898 112588648 3750 True 526.625000 1733 93.645125 230 3139 8 chr4A.!!$R1 2909

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
892 895 0.028642 ATTACCTGGGGAGGGCTGAT 60.029 55.0 0.0 0.0 0.0 2.9 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2335 4205 0.036164 ACCACATGGAAGTGCGCTAA 59.964 50.0 9.73 0.0 38.18 3.09 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.978824 GCACCTTCTCGTGGGCTA 59.021 61.111 0.00 0.00 34.16 3.93
18 19 1.153549 GCACCTTCTCGTGGGCTAG 60.154 63.158 0.00 0.00 34.16 3.42
19 20 1.153549 CACCTTCTCGTGGGCTAGC 60.154 63.158 6.04 6.04 0.00 3.42
20 21 2.105128 CCTTCTCGTGGGCTAGCG 59.895 66.667 9.00 0.00 0.00 4.26
21 22 2.105128 CTTCTCGTGGGCTAGCGG 59.895 66.667 9.00 0.00 0.00 5.52
22 23 2.361992 TTCTCGTGGGCTAGCGGA 60.362 61.111 9.00 2.55 0.00 5.54
23 24 2.615262 CTTCTCGTGGGCTAGCGGAC 62.615 65.000 9.00 6.66 0.00 4.79
24 25 4.554363 CTCGTGGGCTAGCGGACG 62.554 72.222 23.92 23.92 0.00 4.79
27 28 4.208686 GTGGGCTAGCGGACGGAG 62.209 72.222 9.00 0.00 0.00 4.63
30 31 4.143333 GGCTAGCGGACGGAGCAA 62.143 66.667 9.00 0.00 37.98 3.91
31 32 2.125673 GCTAGCGGACGGAGCAAA 60.126 61.111 0.00 0.00 36.20 3.68
32 33 2.453638 GCTAGCGGACGGAGCAAAC 61.454 63.158 0.00 0.00 36.20 2.93
33 34 1.080093 CTAGCGGACGGAGCAAACA 60.080 57.895 2.17 0.00 37.01 2.83
34 35 1.352156 CTAGCGGACGGAGCAAACAC 61.352 60.000 2.17 0.00 37.01 3.32
35 36 4.072088 GCGGACGGAGCAAACACG 62.072 66.667 0.00 0.00 34.19 4.49
36 37 2.355363 CGGACGGAGCAAACACGA 60.355 61.111 0.00 0.00 0.00 4.35
37 38 1.736645 CGGACGGAGCAAACACGAT 60.737 57.895 0.00 0.00 0.00 3.73
38 39 1.683790 CGGACGGAGCAAACACGATC 61.684 60.000 0.00 0.00 0.00 3.69
39 40 0.669318 GGACGGAGCAAACACGATCA 60.669 55.000 0.00 0.00 0.00 2.92
40 41 1.144969 GACGGAGCAAACACGATCAA 58.855 50.000 0.00 0.00 0.00 2.57
41 42 1.126846 GACGGAGCAAACACGATCAAG 59.873 52.381 0.00 0.00 0.00 3.02
42 43 1.148310 CGGAGCAAACACGATCAAGT 58.852 50.000 0.00 0.00 0.00 3.16
43 44 1.126846 CGGAGCAAACACGATCAAGTC 59.873 52.381 0.00 0.00 0.00 3.01
44 45 1.464997 GGAGCAAACACGATCAAGTCC 59.535 52.381 0.00 0.00 0.00 3.85
45 46 2.143122 GAGCAAACACGATCAAGTCCA 58.857 47.619 0.00 0.00 0.00 4.02
46 47 2.744202 GAGCAAACACGATCAAGTCCAT 59.256 45.455 0.00 0.00 0.00 3.41
47 48 2.485426 AGCAAACACGATCAAGTCCATG 59.515 45.455 0.00 0.00 0.00 3.66
48 49 2.226437 GCAAACACGATCAAGTCCATGT 59.774 45.455 0.00 0.00 0.00 3.21
49 50 3.667960 GCAAACACGATCAAGTCCATGTC 60.668 47.826 0.00 0.00 0.00 3.06
50 51 1.996292 ACACGATCAAGTCCATGTCG 58.004 50.000 0.00 0.00 38.21 4.35
51 52 1.272490 ACACGATCAAGTCCATGTCGT 59.728 47.619 0.00 0.00 45.27 4.34
52 53 1.996292 ACGATCAAGTCCATGTCGTG 58.004 50.000 4.69 0.64 43.07 4.35
60 61 2.671070 CCATGTCGTGGCCTCCTT 59.329 61.111 3.32 0.00 42.12 3.36
61 62 1.450312 CCATGTCGTGGCCTCCTTC 60.450 63.158 3.32 0.00 42.12 3.46
62 63 1.450312 CATGTCGTGGCCTCCTTCC 60.450 63.158 3.32 0.00 0.00 3.46
63 64 1.613630 ATGTCGTGGCCTCCTTCCT 60.614 57.895 3.32 0.00 0.00 3.36
64 65 1.617947 ATGTCGTGGCCTCCTTCCTC 61.618 60.000 3.32 0.00 0.00 3.71
65 66 3.068691 TCGTGGCCTCCTTCCTCG 61.069 66.667 3.32 0.00 40.67 4.63
66 67 4.821589 CGTGGCCTCCTTCCTCGC 62.822 72.222 3.32 0.00 34.51 5.03
67 68 3.706373 GTGGCCTCCTTCCTCGCA 61.706 66.667 3.32 0.00 0.00 5.10
68 69 3.393970 TGGCCTCCTTCCTCGCAG 61.394 66.667 3.32 0.00 0.00 5.18
69 70 4.847444 GGCCTCCTTCCTCGCAGC 62.847 72.222 0.00 0.00 0.00 5.25
70 71 3.780173 GCCTCCTTCCTCGCAGCT 61.780 66.667 0.00 0.00 0.00 4.24
71 72 2.498726 CCTCCTTCCTCGCAGCTC 59.501 66.667 0.00 0.00 0.00 4.09
72 73 2.103934 CTCCTTCCTCGCAGCTCG 59.896 66.667 0.00 0.00 40.15 5.03
73 74 4.135153 TCCTTCCTCGCAGCTCGC 62.135 66.667 0.00 0.00 38.27 5.03
96 97 2.729862 CGCTATAGGGTGCGTCGC 60.730 66.667 11.10 11.10 46.09 5.19
97 98 2.728817 GCTATAGGGTGCGTCGCT 59.271 61.111 19.50 0.00 42.08 4.93
98 99 1.371881 GCTATAGGGTGCGTCGCTC 60.372 63.158 19.50 14.98 39.95 5.03
99 100 1.286260 CTATAGGGTGCGTCGCTCC 59.714 63.158 26.29 26.29 40.94 4.70
124 125 3.863407 GAGATTTCTCCGGGTTGCT 57.137 52.632 0.00 0.00 37.02 3.91
125 126 1.657822 GAGATTTCTCCGGGTTGCTC 58.342 55.000 0.00 0.00 37.02 4.26
126 127 0.108138 AGATTTCTCCGGGTTGCTCG 60.108 55.000 0.00 0.00 0.00 5.03
127 128 1.706287 GATTTCTCCGGGTTGCTCGC 61.706 60.000 0.00 0.00 0.00 5.03
134 135 2.572284 GGGTTGCTCGCGACTACT 59.428 61.111 3.71 0.00 0.00 2.57
135 136 1.805254 GGGTTGCTCGCGACTACTA 59.195 57.895 3.71 0.00 0.00 1.82
136 137 0.248539 GGGTTGCTCGCGACTACTAG 60.249 60.000 3.71 0.00 0.00 2.57
137 138 0.248539 GGTTGCTCGCGACTACTAGG 60.249 60.000 3.71 0.00 0.00 3.02
138 139 0.731417 GTTGCTCGCGACTACTAGGA 59.269 55.000 3.71 0.00 0.00 2.94
139 140 0.731417 TTGCTCGCGACTACTAGGAC 59.269 55.000 3.71 0.00 0.00 3.85
140 141 1.094073 TGCTCGCGACTACTAGGACC 61.094 60.000 3.71 0.00 0.00 4.46
141 142 1.784036 GCTCGCGACTACTAGGACCC 61.784 65.000 3.71 0.00 0.00 4.46
142 143 1.153086 TCGCGACTACTAGGACCCC 60.153 63.158 3.71 0.00 0.00 4.95
143 144 2.192187 CGCGACTACTAGGACCCCC 61.192 68.421 0.00 0.00 0.00 5.40
144 145 1.076485 GCGACTACTAGGACCCCCA 60.076 63.158 0.00 0.00 33.88 4.96
145 146 0.469518 GCGACTACTAGGACCCCCAT 60.470 60.000 0.00 0.00 33.88 4.00
146 147 1.329256 CGACTACTAGGACCCCCATG 58.671 60.000 0.00 0.00 33.88 3.66
147 148 1.718280 GACTACTAGGACCCCCATGG 58.282 60.000 4.14 4.14 41.37 3.66
148 149 1.219724 GACTACTAGGACCCCCATGGA 59.780 57.143 15.22 0.00 38.00 3.41
149 150 1.062352 ACTACTAGGACCCCCATGGAC 60.062 57.143 15.22 1.37 38.00 4.02
150 151 0.105862 TACTAGGACCCCCATGGACG 60.106 60.000 15.22 4.74 38.00 4.79
151 152 1.075525 CTAGGACCCCCATGGACGA 60.076 63.158 15.22 0.00 38.00 4.20
152 153 1.382146 TAGGACCCCCATGGACGAC 60.382 63.158 15.22 2.52 38.00 4.34
153 154 4.157120 GGACCCCCATGGACGACG 62.157 72.222 15.22 0.00 38.00 5.12
154 155 4.157120 GACCCCCATGGACGACGG 62.157 72.222 15.22 4.99 38.00 4.79
155 156 4.707768 ACCCCCATGGACGACGGA 62.708 66.667 15.22 0.00 38.00 4.69
156 157 4.157120 CCCCCATGGACGACGGAC 62.157 72.222 15.22 0.00 35.39 4.79
158 159 3.445687 CCCATGGACGACGGACGA 61.446 66.667 15.22 0.00 45.77 4.20
159 160 2.102357 CCATGGACGACGGACGAG 59.898 66.667 5.56 0.00 45.77 4.18
160 161 2.102357 CATGGACGACGGACGAGG 59.898 66.667 6.90 0.00 45.77 4.63
161 162 3.138798 ATGGACGACGGACGAGGG 61.139 66.667 6.90 0.00 45.77 4.30
162 163 3.933048 ATGGACGACGGACGAGGGT 62.933 63.158 6.90 0.00 45.77 4.34
163 164 4.112341 GGACGACGGACGAGGGTG 62.112 72.222 6.90 0.00 45.77 4.61
164 165 4.112341 GACGACGGACGAGGGTGG 62.112 72.222 6.90 0.00 45.77 4.61
182 183 2.184322 CGGCACAGACGCAGGTAT 59.816 61.111 0.00 0.00 0.00 2.73
183 184 2.167219 CGGCACAGACGCAGGTATG 61.167 63.158 0.00 0.00 41.13 2.39
184 185 1.218047 GGCACAGACGCAGGTATGA 59.782 57.895 0.00 0.00 37.57 2.15
185 186 0.807667 GGCACAGACGCAGGTATGAG 60.808 60.000 0.00 0.00 37.57 2.90
186 187 0.807667 GCACAGACGCAGGTATGAGG 60.808 60.000 0.00 0.00 37.57 3.86
187 188 0.817654 CACAGACGCAGGTATGAGGA 59.182 55.000 0.00 0.00 37.57 3.71
188 189 1.107114 ACAGACGCAGGTATGAGGAG 58.893 55.000 0.00 0.00 37.57 3.69
189 190 0.387202 CAGACGCAGGTATGAGGAGG 59.613 60.000 0.00 0.00 37.57 4.30
190 191 1.068250 GACGCAGGTATGAGGAGGC 59.932 63.158 0.00 0.00 0.00 4.70
191 192 2.028190 CGCAGGTATGAGGAGGCG 59.972 66.667 0.00 0.00 38.45 5.52
192 193 2.490148 CGCAGGTATGAGGAGGCGA 61.490 63.158 0.00 0.00 46.65 5.54
193 194 1.068250 GCAGGTATGAGGAGGCGAC 59.932 63.158 0.00 0.00 0.00 5.19
194 195 1.360551 CAGGTATGAGGAGGCGACG 59.639 63.158 0.00 0.00 0.00 5.12
195 196 1.101635 CAGGTATGAGGAGGCGACGA 61.102 60.000 0.00 0.00 0.00 4.20
196 197 1.102222 AGGTATGAGGAGGCGACGAC 61.102 60.000 0.00 0.00 0.00 4.34
197 198 1.102222 GGTATGAGGAGGCGACGACT 61.102 60.000 0.71 0.71 0.00 4.18
198 199 0.308376 GTATGAGGAGGCGACGACTC 59.692 60.000 22.88 22.88 36.87 3.36
199 200 0.107361 TATGAGGAGGCGACGACTCA 60.107 55.000 30.73 20.28 46.63 3.41
200 201 0.965866 ATGAGGAGGCGACGACTCAA 60.966 55.000 30.73 16.66 46.04 3.02
201 202 1.176619 TGAGGAGGCGACGACTCAAA 61.177 55.000 30.73 13.55 39.95 2.69
202 203 0.456995 GAGGAGGCGACGACTCAAAG 60.457 60.000 30.73 0.00 39.95 2.77
203 204 2.095252 GGAGGCGACGACTCAAAGC 61.095 63.158 30.73 10.88 39.95 3.51
205 206 3.479269 GGCGACGACTCAAAGCCG 61.479 66.667 0.00 0.00 38.28 5.52
206 207 3.479269 GCGACGACTCAAAGCCGG 61.479 66.667 0.00 0.00 0.00 6.13
207 208 2.809601 CGACGACTCAAAGCCGGG 60.810 66.667 2.18 0.00 0.00 5.73
208 209 2.654877 GACGACTCAAAGCCGGGA 59.345 61.111 2.18 0.00 0.00 5.14
209 210 1.005394 GACGACTCAAAGCCGGGAA 60.005 57.895 2.18 0.00 0.00 3.97
210 211 0.601841 GACGACTCAAAGCCGGGAAA 60.602 55.000 2.18 0.00 0.00 3.13
211 212 0.602905 ACGACTCAAAGCCGGGAAAG 60.603 55.000 2.18 0.00 0.00 2.62
212 213 1.298859 CGACTCAAAGCCGGGAAAGG 61.299 60.000 2.18 0.00 0.00 3.11
213 214 0.960861 GACTCAAAGCCGGGAAAGGG 60.961 60.000 2.18 0.00 0.00 3.95
214 215 1.678970 CTCAAAGCCGGGAAAGGGG 60.679 63.158 2.18 0.00 0.00 4.79
215 216 2.679996 CAAAGCCGGGAAAGGGGG 60.680 66.667 2.18 0.00 0.00 5.40
250 251 2.594592 GGGGTGCGATATGGTGGC 60.595 66.667 0.00 0.00 0.00 5.01
263 264 6.072175 GCGATATGGTGGCCTTGATTAAATTA 60.072 38.462 3.32 0.00 0.00 1.40
285 286 0.743345 GGGATTTGGAGTCGAACCGG 60.743 60.000 0.00 0.00 0.00 5.28
292 293 1.080093 GAGTCGAACCGGCATGTCA 60.080 57.895 0.00 0.00 32.13 3.58
343 344 1.532604 TATGTCCGCCTCGCATAGGG 61.533 60.000 4.37 0.00 46.65 3.53
359 360 0.480252 AGGGGCTGAATATGAAGGGC 59.520 55.000 0.00 0.00 0.00 5.19
373 374 4.090588 GGGCGTCGGACATCCCAA 62.091 66.667 23.11 0.00 38.62 4.12
383 384 2.227194 GGACATCCCAAACGTTTGACT 58.773 47.619 36.20 19.87 40.55 3.41
384 385 2.621526 GGACATCCCAAACGTTTGACTT 59.378 45.455 36.20 19.69 40.55 3.01
388 389 4.340950 ACATCCCAAACGTTTGACTTGATT 59.659 37.500 36.20 19.30 40.55 2.57
399 400 5.468746 CGTTTGACTTGATTTTGAGGGTCTA 59.531 40.000 0.00 0.00 0.00 2.59
401 402 4.579869 TGACTTGATTTTGAGGGTCTAGC 58.420 43.478 0.00 0.00 0.00 3.42
403 404 4.583871 ACTTGATTTTGAGGGTCTAGCTG 58.416 43.478 0.00 0.00 0.00 4.24
439 440 9.638239 TTTTTGTCTGGCAATGTTAAATCTATC 57.362 29.630 0.00 0.00 36.89 2.08
442 443 5.527582 GTCTGGCAATGTTAAATCTATCCGT 59.472 40.000 0.00 0.00 0.00 4.69
453 454 1.696063 TCTATCCGTCCGGTTTAGGG 58.304 55.000 0.00 0.00 36.47 3.53
469 470 1.914764 GGGGGTAAGTGGACGGTCA 60.915 63.158 10.76 0.00 0.00 4.02
514 515 4.440758 CGAGCACATGTTAAAACCAACTTG 59.559 41.667 0.00 0.00 38.72 3.16
626 629 5.066893 GGAAAAACGGAGGTAAAAGAAGTGT 59.933 40.000 0.00 0.00 0.00 3.55
686 689 2.432628 GTCAGACCCAGAACGCCG 60.433 66.667 0.00 0.00 0.00 6.46
730 733 1.664649 CGCTGAACGCTGAACCTGA 60.665 57.895 0.00 0.00 36.13 3.86
731 734 1.862806 GCTGAACGCTGAACCTGAC 59.137 57.895 0.00 0.00 35.14 3.51
732 735 0.880278 GCTGAACGCTGAACCTGACA 60.880 55.000 0.00 0.00 35.14 3.58
733 736 1.143305 CTGAACGCTGAACCTGACAG 58.857 55.000 0.00 0.00 38.27 3.51
738 741 4.758692 CTGAACCTGACAGCGTGT 57.241 55.556 0.00 0.00 0.00 4.49
739 742 2.992089 CTGAACCTGACAGCGTGTT 58.008 52.632 0.00 0.00 0.00 3.32
740 743 1.299541 CTGAACCTGACAGCGTGTTT 58.700 50.000 0.00 0.00 0.00 2.83
741 744 1.003545 CTGAACCTGACAGCGTGTTTG 60.004 52.381 0.00 0.00 0.00 2.93
742 745 0.307760 GAACCTGACAGCGTGTTTGG 59.692 55.000 0.00 0.00 0.00 3.28
743 746 0.393808 AACCTGACAGCGTGTTTGGT 60.394 50.000 0.00 8.79 37.67 3.67
744 747 0.393808 ACCTGACAGCGTGTTTGGTT 60.394 50.000 0.00 0.00 34.32 3.67
745 748 0.307760 CCTGACAGCGTGTTTGGTTC 59.692 55.000 0.00 0.00 0.00 3.62
746 749 0.042188 CTGACAGCGTGTTTGGTTCG 60.042 55.000 0.00 0.00 0.00 3.95
747 750 1.278637 GACAGCGTGTTTGGTTCGG 59.721 57.895 0.00 0.00 0.00 4.30
748 751 1.433837 GACAGCGTGTTTGGTTCGGT 61.434 55.000 0.00 0.00 35.75 4.69
749 752 1.010125 CAGCGTGTTTGGTTCGGTG 60.010 57.895 0.00 0.00 44.05 4.94
750 753 2.184167 AGCGTGTTTGGTTCGGTGG 61.184 57.895 0.00 0.00 34.16 4.61
751 754 2.181521 GCGTGTTTGGTTCGGTGGA 61.182 57.895 0.00 0.00 0.00 4.02
752 755 1.938861 CGTGTTTGGTTCGGTGGAG 59.061 57.895 0.00 0.00 0.00 3.86
753 756 0.812412 CGTGTTTGGTTCGGTGGAGT 60.812 55.000 0.00 0.00 0.00 3.85
754 757 1.385528 GTGTTTGGTTCGGTGGAGTT 58.614 50.000 0.00 0.00 0.00 3.01
755 758 1.064952 GTGTTTGGTTCGGTGGAGTTG 59.935 52.381 0.00 0.00 0.00 3.16
756 759 0.666374 GTTTGGTTCGGTGGAGTTGG 59.334 55.000 0.00 0.00 0.00 3.77
757 760 0.547075 TTTGGTTCGGTGGAGTTGGA 59.453 50.000 0.00 0.00 0.00 3.53
758 761 0.107831 TTGGTTCGGTGGAGTTGGAG 59.892 55.000 0.00 0.00 0.00 3.86
759 762 0.761323 TGGTTCGGTGGAGTTGGAGA 60.761 55.000 0.00 0.00 0.00 3.71
760 763 0.037232 GGTTCGGTGGAGTTGGAGAG 60.037 60.000 0.00 0.00 0.00 3.20
761 764 0.966920 GTTCGGTGGAGTTGGAGAGA 59.033 55.000 0.00 0.00 0.00 3.10
762 765 1.067495 GTTCGGTGGAGTTGGAGAGAG 60.067 57.143 0.00 0.00 0.00 3.20
763 766 0.612174 TCGGTGGAGTTGGAGAGAGG 60.612 60.000 0.00 0.00 0.00 3.69
764 767 1.608717 CGGTGGAGTTGGAGAGAGGG 61.609 65.000 0.00 0.00 0.00 4.30
765 768 0.252284 GGTGGAGTTGGAGAGAGGGA 60.252 60.000 0.00 0.00 0.00 4.20
766 769 1.645710 GTGGAGTTGGAGAGAGGGAA 58.354 55.000 0.00 0.00 0.00 3.97
767 770 2.192263 GTGGAGTTGGAGAGAGGGAAT 58.808 52.381 0.00 0.00 0.00 3.01
768 771 2.093235 GTGGAGTTGGAGAGAGGGAATG 60.093 54.545 0.00 0.00 0.00 2.67
769 772 1.488393 GGAGTTGGAGAGAGGGAATGG 59.512 57.143 0.00 0.00 0.00 3.16
770 773 1.488393 GAGTTGGAGAGAGGGAATGGG 59.512 57.143 0.00 0.00 0.00 4.00
771 774 1.081174 AGTTGGAGAGAGGGAATGGGA 59.919 52.381 0.00 0.00 0.00 4.37
772 775 1.488393 GTTGGAGAGAGGGAATGGGAG 59.512 57.143 0.00 0.00 0.00 4.30
773 776 0.719015 TGGAGAGAGGGAATGGGAGT 59.281 55.000 0.00 0.00 0.00 3.85
774 777 1.081174 TGGAGAGAGGGAATGGGAGTT 59.919 52.381 0.00 0.00 0.00 3.01
775 778 2.200955 GGAGAGAGGGAATGGGAGTTT 58.799 52.381 0.00 0.00 0.00 2.66
776 779 2.092699 GGAGAGAGGGAATGGGAGTTTG 60.093 54.545 0.00 0.00 0.00 2.93
777 780 2.840651 GAGAGAGGGAATGGGAGTTTGA 59.159 50.000 0.00 0.00 0.00 2.69
778 781 2.843113 AGAGAGGGAATGGGAGTTTGAG 59.157 50.000 0.00 0.00 0.00 3.02
779 782 1.918957 AGAGGGAATGGGAGTTTGAGG 59.081 52.381 0.00 0.00 0.00 3.86
780 783 0.332972 AGGGAATGGGAGTTTGAGGC 59.667 55.000 0.00 0.00 0.00 4.70
781 784 0.332972 GGGAATGGGAGTTTGAGGCT 59.667 55.000 0.00 0.00 0.00 4.58
782 785 1.272704 GGGAATGGGAGTTTGAGGCTT 60.273 52.381 0.00 0.00 0.00 4.35
783 786 2.025321 GGGAATGGGAGTTTGAGGCTTA 60.025 50.000 0.00 0.00 0.00 3.09
784 787 3.282885 GGAATGGGAGTTTGAGGCTTAG 58.717 50.000 0.00 0.00 0.00 2.18
785 788 3.054361 GGAATGGGAGTTTGAGGCTTAGA 60.054 47.826 0.00 0.00 0.00 2.10
786 789 3.922171 ATGGGAGTTTGAGGCTTAGAG 57.078 47.619 0.00 0.00 0.00 2.43
787 790 2.902608 TGGGAGTTTGAGGCTTAGAGA 58.097 47.619 0.00 0.00 0.00 3.10
788 791 2.834549 TGGGAGTTTGAGGCTTAGAGAG 59.165 50.000 0.00 0.00 0.00 3.20
789 792 2.835156 GGGAGTTTGAGGCTTAGAGAGT 59.165 50.000 0.00 0.00 0.00 3.24
790 793 3.118920 GGGAGTTTGAGGCTTAGAGAGTC 60.119 52.174 0.00 0.00 0.00 3.36
791 794 3.767131 GGAGTTTGAGGCTTAGAGAGTCT 59.233 47.826 0.00 0.00 44.88 3.24
792 795 4.221924 GGAGTTTGAGGCTTAGAGAGTCTT 59.778 45.833 0.00 0.00 41.41 3.01
793 796 5.419471 GGAGTTTGAGGCTTAGAGAGTCTTA 59.581 44.000 0.00 0.00 41.41 2.10
794 797 6.097696 GGAGTTTGAGGCTTAGAGAGTCTTAT 59.902 42.308 0.00 0.00 41.41 1.73
795 798 7.364320 GGAGTTTGAGGCTTAGAGAGTCTTATT 60.364 40.741 0.00 0.00 41.41 1.40
796 799 7.552459 AGTTTGAGGCTTAGAGAGTCTTATTC 58.448 38.462 0.00 0.00 41.41 1.75
797 800 6.472686 TTGAGGCTTAGAGAGTCTTATTCC 57.527 41.667 0.00 0.00 41.41 3.01
798 801 5.772004 TGAGGCTTAGAGAGTCTTATTCCT 58.228 41.667 0.00 0.00 41.41 3.36
799 802 6.198639 TGAGGCTTAGAGAGTCTTATTCCTT 58.801 40.000 0.00 0.00 41.41 3.36
800 803 6.670027 TGAGGCTTAGAGAGTCTTATTCCTTT 59.330 38.462 0.00 0.00 41.41 3.11
801 804 6.883744 AGGCTTAGAGAGTCTTATTCCTTTG 58.116 40.000 0.00 0.00 36.82 2.77
802 805 6.442244 AGGCTTAGAGAGTCTTATTCCTTTGT 59.558 38.462 0.00 0.00 36.82 2.83
803 806 7.037945 AGGCTTAGAGAGTCTTATTCCTTTGTT 60.038 37.037 0.00 0.00 36.82 2.83
804 807 7.608376 GGCTTAGAGAGTCTTATTCCTTTGTTT 59.392 37.037 0.00 0.00 0.00 2.83
805 808 8.447053 GCTTAGAGAGTCTTATTCCTTTGTTTG 58.553 37.037 0.00 0.00 0.00 2.93
806 809 9.495572 CTTAGAGAGTCTTATTCCTTTGTTTGT 57.504 33.333 0.00 0.00 0.00 2.83
807 810 9.847224 TTAGAGAGTCTTATTCCTTTGTTTGTT 57.153 29.630 0.00 0.00 0.00 2.83
808 811 8.753497 AGAGAGTCTTATTCCTTTGTTTGTTT 57.247 30.769 0.00 0.00 0.00 2.83
809 812 9.847224 AGAGAGTCTTATTCCTTTGTTTGTTTA 57.153 29.630 0.00 0.00 0.00 2.01
811 814 9.067986 AGAGTCTTATTCCTTTGTTTGTTTAGG 57.932 33.333 0.00 0.00 0.00 2.69
812 815 8.762481 AGTCTTATTCCTTTGTTTGTTTAGGT 57.238 30.769 0.00 0.00 0.00 3.08
813 816 8.630037 AGTCTTATTCCTTTGTTTGTTTAGGTG 58.370 33.333 0.00 0.00 0.00 4.00
814 817 7.381408 GTCTTATTCCTTTGTTTGTTTAGGTGC 59.619 37.037 0.00 0.00 0.00 5.01
815 818 5.606348 ATTCCTTTGTTTGTTTAGGTGCA 57.394 34.783 0.00 0.00 0.00 4.57
816 819 5.407407 TTCCTTTGTTTGTTTAGGTGCAA 57.593 34.783 0.00 0.00 0.00 4.08
817 820 5.606348 TCCTTTGTTTGTTTAGGTGCAAT 57.394 34.783 0.00 0.00 0.00 3.56
818 821 5.355596 TCCTTTGTTTGTTTAGGTGCAATG 58.644 37.500 0.00 0.00 0.00 2.82
819 822 4.511082 CCTTTGTTTGTTTAGGTGCAATGG 59.489 41.667 0.00 0.00 0.00 3.16
820 823 3.742433 TGTTTGTTTAGGTGCAATGGG 57.258 42.857 0.00 0.00 0.00 4.00
821 824 3.300388 TGTTTGTTTAGGTGCAATGGGA 58.700 40.909 0.00 0.00 0.00 4.37
822 825 3.706594 TGTTTGTTTAGGTGCAATGGGAA 59.293 39.130 0.00 0.00 0.00 3.97
823 826 4.346418 TGTTTGTTTAGGTGCAATGGGAAT 59.654 37.500 0.00 0.00 0.00 3.01
824 827 5.163258 TGTTTGTTTAGGTGCAATGGGAATT 60.163 36.000 0.00 0.00 0.00 2.17
825 828 4.799564 TGTTTAGGTGCAATGGGAATTC 57.200 40.909 0.00 0.00 0.00 2.17
826 829 3.192422 TGTTTAGGTGCAATGGGAATTCG 59.808 43.478 0.00 0.00 0.00 3.34
827 830 3.358111 TTAGGTGCAATGGGAATTCGA 57.642 42.857 0.00 0.00 0.00 3.71
828 831 1.463674 AGGTGCAATGGGAATTCGAC 58.536 50.000 0.00 0.00 0.00 4.20
829 832 1.173043 GGTGCAATGGGAATTCGACA 58.827 50.000 0.00 1.57 0.00 4.35
830 833 1.133025 GGTGCAATGGGAATTCGACAG 59.867 52.381 0.00 0.00 0.00 3.51
831 834 1.133025 GTGCAATGGGAATTCGACAGG 59.867 52.381 0.00 0.13 0.00 4.00
832 835 0.740737 GCAATGGGAATTCGACAGGG 59.259 55.000 0.00 0.00 0.00 4.45
833 836 1.681780 GCAATGGGAATTCGACAGGGA 60.682 52.381 0.00 0.00 0.00 4.20
834 837 2.722094 CAATGGGAATTCGACAGGGAA 58.278 47.619 0.00 0.00 0.00 3.97
835 838 2.684881 CAATGGGAATTCGACAGGGAAG 59.315 50.000 0.00 0.00 0.00 3.46
836 839 1.358152 TGGGAATTCGACAGGGAAGT 58.642 50.000 0.00 0.00 0.00 3.01
837 840 1.003118 TGGGAATTCGACAGGGAAGTG 59.997 52.381 0.00 0.00 0.00 3.16
838 841 1.278127 GGGAATTCGACAGGGAAGTGA 59.722 52.381 0.00 0.00 0.00 3.41
839 842 2.290071 GGGAATTCGACAGGGAAGTGAA 60.290 50.000 0.00 0.00 0.00 3.18
840 843 3.408634 GGAATTCGACAGGGAAGTGAAA 58.591 45.455 0.00 0.00 0.00 2.69
841 844 3.437049 GGAATTCGACAGGGAAGTGAAAG 59.563 47.826 0.00 0.00 0.00 2.62
842 845 2.543777 TTCGACAGGGAAGTGAAAGG 57.456 50.000 0.00 0.00 0.00 3.11
843 846 0.685097 TCGACAGGGAAGTGAAAGGG 59.315 55.000 0.00 0.00 0.00 3.95
844 847 0.321653 CGACAGGGAAGTGAAAGGGG 60.322 60.000 0.00 0.00 0.00 4.79
845 848 1.064825 GACAGGGAAGTGAAAGGGGA 58.935 55.000 0.00 0.00 0.00 4.81
846 849 1.423921 GACAGGGAAGTGAAAGGGGAA 59.576 52.381 0.00 0.00 0.00 3.97
847 850 2.041755 GACAGGGAAGTGAAAGGGGAAT 59.958 50.000 0.00 0.00 0.00 3.01
848 851 2.450886 ACAGGGAAGTGAAAGGGGAATT 59.549 45.455 0.00 0.00 0.00 2.17
849 852 3.092301 CAGGGAAGTGAAAGGGGAATTC 58.908 50.000 0.00 0.00 0.00 2.17
850 853 2.721906 AGGGAAGTGAAAGGGGAATTCA 59.278 45.455 7.93 0.00 34.56 2.57
854 857 2.989422 GTGAAAGGGGAATTCACGTG 57.011 50.000 9.94 9.94 44.90 4.49
855 858 2.227194 GTGAAAGGGGAATTCACGTGT 58.773 47.619 16.51 0.00 44.90 4.49
856 859 3.404899 GTGAAAGGGGAATTCACGTGTA 58.595 45.455 16.51 6.35 44.90 2.90
857 860 3.816523 GTGAAAGGGGAATTCACGTGTAA 59.183 43.478 16.51 9.07 44.90 2.41
858 861 4.276431 GTGAAAGGGGAATTCACGTGTAAA 59.724 41.667 16.51 3.49 44.90 2.01
859 862 4.888239 TGAAAGGGGAATTCACGTGTAAAA 59.112 37.500 16.51 2.66 32.10 1.52
860 863 5.009210 TGAAAGGGGAATTCACGTGTAAAAG 59.991 40.000 16.51 0.00 32.10 2.27
861 864 4.094830 AGGGGAATTCACGTGTAAAAGT 57.905 40.909 16.51 1.27 0.00 2.66
862 865 4.070009 AGGGGAATTCACGTGTAAAAGTC 58.930 43.478 16.51 11.10 0.00 3.01
863 866 3.189910 GGGGAATTCACGTGTAAAAGTCC 59.810 47.826 20.56 20.56 36.64 3.85
864 867 3.189910 GGGAATTCACGTGTAAAAGTCCC 59.810 47.826 27.68 27.68 46.42 4.46
865 868 3.816523 GGAATTCACGTGTAAAAGTCCCA 59.183 43.478 18.90 0.00 32.44 4.37
866 869 4.319984 GGAATTCACGTGTAAAAGTCCCAC 60.320 45.833 18.90 1.05 32.44 4.61
867 870 3.547054 TTCACGTGTAAAAGTCCCACT 57.453 42.857 16.51 0.00 0.00 4.00
868 871 3.547054 TCACGTGTAAAAGTCCCACTT 57.453 42.857 16.51 0.00 40.80 3.16
869 872 4.669206 TCACGTGTAAAAGTCCCACTTA 57.331 40.909 16.51 0.00 37.47 2.24
870 873 5.217978 TCACGTGTAAAAGTCCCACTTAT 57.782 39.130 16.51 0.00 37.47 1.73
871 874 5.232463 TCACGTGTAAAAGTCCCACTTATC 58.768 41.667 16.51 0.00 37.47 1.75
872 875 5.011329 TCACGTGTAAAAGTCCCACTTATCT 59.989 40.000 16.51 0.00 37.47 1.98
873 876 6.209192 TCACGTGTAAAAGTCCCACTTATCTA 59.791 38.462 16.51 0.00 37.47 1.98
874 877 7.039882 CACGTGTAAAAGTCCCACTTATCTAT 58.960 38.462 7.58 0.00 37.47 1.98
875 878 7.548075 CACGTGTAAAAGTCCCACTTATCTATT 59.452 37.037 7.58 0.00 37.47 1.73
876 879 8.752187 ACGTGTAAAAGTCCCACTTATCTATTA 58.248 33.333 0.00 0.00 37.47 0.98
877 880 9.028185 CGTGTAAAAGTCCCACTTATCTATTAC 57.972 37.037 0.00 0.00 37.47 1.89
878 881 9.322773 GTGTAAAAGTCCCACTTATCTATTACC 57.677 37.037 5.88 0.00 37.47 2.85
879 882 9.275572 TGTAAAAGTCCCACTTATCTATTACCT 57.724 33.333 5.88 0.00 37.47 3.08
880 883 9.543783 GTAAAAGTCCCACTTATCTATTACCTG 57.456 37.037 0.00 0.00 37.47 4.00
881 884 6.749036 AAGTCCCACTTATCTATTACCTGG 57.251 41.667 0.00 0.00 36.52 4.45
882 885 5.155905 AGTCCCACTTATCTATTACCTGGG 58.844 45.833 0.00 0.00 38.63 4.45
883 886 4.286291 GTCCCACTTATCTATTACCTGGGG 59.714 50.000 0.00 0.00 37.95 4.96
884 887 4.173244 TCCCACTTATCTATTACCTGGGGA 59.827 45.833 0.00 0.00 37.95 4.81
885 888 4.532521 CCCACTTATCTATTACCTGGGGAG 59.467 50.000 0.00 0.00 34.30 4.30
886 889 4.532521 CCACTTATCTATTACCTGGGGAGG 59.467 50.000 0.00 0.00 0.00 4.30
887 890 4.532521 CACTTATCTATTACCTGGGGAGGG 59.467 50.000 0.00 0.00 0.00 4.30
888 891 2.046280 ATCTATTACCTGGGGAGGGC 57.954 55.000 0.00 0.00 0.00 5.19
889 892 0.949582 TCTATTACCTGGGGAGGGCT 59.050 55.000 0.00 0.00 0.00 5.19
890 893 1.059913 CTATTACCTGGGGAGGGCTG 58.940 60.000 0.00 0.00 0.00 4.85
891 894 0.645496 TATTACCTGGGGAGGGCTGA 59.355 55.000 0.00 0.00 0.00 4.26
892 895 0.028642 ATTACCTGGGGAGGGCTGAT 60.029 55.000 0.00 0.00 0.00 2.90
893 896 0.645496 TTACCTGGGGAGGGCTGATA 59.355 55.000 0.00 0.00 0.00 2.15
894 897 0.645496 TACCTGGGGAGGGCTGATAA 59.355 55.000 0.00 0.00 0.00 1.75
895 898 0.028642 ACCTGGGGAGGGCTGATAAT 60.029 55.000 0.00 0.00 0.00 1.28
896 899 1.152649 CCTGGGGAGGGCTGATAATT 58.847 55.000 0.00 0.00 0.00 1.40
897 900 1.202976 CCTGGGGAGGGCTGATAATTG 60.203 57.143 0.00 0.00 0.00 2.32
898 901 1.776667 CTGGGGAGGGCTGATAATTGA 59.223 52.381 0.00 0.00 0.00 2.57
899 902 1.776667 TGGGGAGGGCTGATAATTGAG 59.223 52.381 0.00 0.00 0.00 3.02
900 903 2.057922 GGGGAGGGCTGATAATTGAGA 58.942 52.381 0.00 0.00 0.00 3.27
901 904 2.646798 GGGGAGGGCTGATAATTGAGAT 59.353 50.000 0.00 0.00 0.00 2.75
902 905 3.560882 GGGGAGGGCTGATAATTGAGATG 60.561 52.174 0.00 0.00 0.00 2.90
903 906 3.560882 GGGAGGGCTGATAATTGAGATGG 60.561 52.174 0.00 0.00 0.00 3.51
904 907 3.560882 GGAGGGCTGATAATTGAGATGGG 60.561 52.174 0.00 0.00 0.00 4.00
905 908 2.377869 AGGGCTGATAATTGAGATGGGG 59.622 50.000 0.00 0.00 0.00 4.96
906 909 2.376518 GGGCTGATAATTGAGATGGGGA 59.623 50.000 0.00 0.00 0.00 4.81
907 910 3.181429 GGGCTGATAATTGAGATGGGGAA 60.181 47.826 0.00 0.00 0.00 3.97
908 911 4.473444 GGCTGATAATTGAGATGGGGAAA 58.527 43.478 0.00 0.00 0.00 3.13
909 912 4.522022 GGCTGATAATTGAGATGGGGAAAG 59.478 45.833 0.00 0.00 0.00 2.62
910 913 4.522022 GCTGATAATTGAGATGGGGAAAGG 59.478 45.833 0.00 0.00 0.00 3.11
911 914 5.065613 TGATAATTGAGATGGGGAAAGGG 57.934 43.478 0.00 0.00 0.00 3.95
912 915 4.731416 TGATAATTGAGATGGGGAAAGGGA 59.269 41.667 0.00 0.00 0.00 4.20
913 916 5.195553 TGATAATTGAGATGGGGAAAGGGAA 59.804 40.000 0.00 0.00 0.00 3.97
914 917 4.632105 AATTGAGATGGGGAAAGGGAAT 57.368 40.909 0.00 0.00 0.00 3.01
915 918 4.632105 ATTGAGATGGGGAAAGGGAATT 57.368 40.909 0.00 0.00 0.00 2.17
916 919 5.749422 ATTGAGATGGGGAAAGGGAATTA 57.251 39.130 0.00 0.00 0.00 1.40
917 920 4.796110 TGAGATGGGGAAAGGGAATTAG 57.204 45.455 0.00 0.00 0.00 1.73
918 921 4.379875 TGAGATGGGGAAAGGGAATTAGA 58.620 43.478 0.00 0.00 0.00 2.10
919 922 4.413520 TGAGATGGGGAAAGGGAATTAGAG 59.586 45.833 0.00 0.00 0.00 2.43
920 923 4.384465 AGATGGGGAAAGGGAATTAGAGT 58.616 43.478 0.00 0.00 0.00 3.24
921 924 4.796265 AGATGGGGAAAGGGAATTAGAGTT 59.204 41.667 0.00 0.00 0.00 3.01
922 925 5.976870 AGATGGGGAAAGGGAATTAGAGTTA 59.023 40.000 0.00 0.00 0.00 2.24
923 926 6.450352 AGATGGGGAAAGGGAATTAGAGTTAA 59.550 38.462 0.00 0.00 0.00 2.01
924 927 6.471942 TGGGGAAAGGGAATTAGAGTTAAA 57.528 37.500 0.00 0.00 0.00 1.52
925 928 6.250711 TGGGGAAAGGGAATTAGAGTTAAAC 58.749 40.000 0.00 0.00 0.00 2.01
926 929 6.046286 TGGGGAAAGGGAATTAGAGTTAAACT 59.954 38.462 0.00 0.00 0.00 2.66
927 930 6.602406 GGGGAAAGGGAATTAGAGTTAAACTC 59.398 42.308 0.00 0.00 45.38 3.01
928 931 6.602406 GGGAAAGGGAATTAGAGTTAAACTCC 59.398 42.308 0.00 0.00 46.18 3.85
929 932 7.403671 GGAAAGGGAATTAGAGTTAAACTCCT 58.596 38.462 0.00 0.00 46.18 3.69
930 933 8.546322 GGAAAGGGAATTAGAGTTAAACTCCTA 58.454 37.037 0.00 0.00 46.18 2.94
935 938 8.905660 GGAATTAGAGTTAAACTCCTATTCCC 57.094 38.462 18.02 3.21 46.59 3.97
936 939 7.937942 GGAATTAGAGTTAAACTCCTATTCCCC 59.062 40.741 18.02 2.20 46.59 4.81
937 940 8.640033 AATTAGAGTTAAACTCCTATTCCCCT 57.360 34.615 0.00 0.00 46.18 4.79
938 941 8.640033 ATTAGAGTTAAACTCCTATTCCCCTT 57.360 34.615 0.00 0.00 46.18 3.95
939 942 9.739737 ATTAGAGTTAAACTCCTATTCCCCTTA 57.260 33.333 0.00 0.00 46.18 2.69
940 943 7.434927 AGAGTTAAACTCCTATTCCCCTTAC 57.565 40.000 0.00 0.00 46.18 2.34
941 944 6.386342 AGAGTTAAACTCCTATTCCCCTTACC 59.614 42.308 0.00 0.00 46.18 2.85
942 945 6.277825 AGTTAAACTCCTATTCCCCTTACCT 58.722 40.000 0.00 0.00 0.00 3.08
943 946 6.739042 AGTTAAACTCCTATTCCCCTTACCTT 59.261 38.462 0.00 0.00 0.00 3.50
944 947 5.712084 AAACTCCTATTCCCCTTACCTTC 57.288 43.478 0.00 0.00 0.00 3.46
945 948 3.306613 ACTCCTATTCCCCTTACCTTCG 58.693 50.000 0.00 0.00 0.00 3.79
946 949 3.306613 CTCCTATTCCCCTTACCTTCGT 58.693 50.000 0.00 0.00 0.00 3.85
947 950 3.710165 CTCCTATTCCCCTTACCTTCGTT 59.290 47.826 0.00 0.00 0.00 3.85
948 951 4.106324 TCCTATTCCCCTTACCTTCGTTT 58.894 43.478 0.00 0.00 0.00 3.60
949 952 4.080751 TCCTATTCCCCTTACCTTCGTTTG 60.081 45.833 0.00 0.00 0.00 2.93
950 953 1.900245 TTCCCCTTACCTTCGTTTGC 58.100 50.000 0.00 0.00 0.00 3.68
951 954 0.037160 TCCCCTTACCTTCGTTTGCC 59.963 55.000 0.00 0.00 0.00 4.52
952 955 0.250989 CCCCTTACCTTCGTTTGCCA 60.251 55.000 0.00 0.00 0.00 4.92
953 956 1.611519 CCCTTACCTTCGTTTGCCAA 58.388 50.000 0.00 0.00 0.00 4.52
954 957 1.957877 CCCTTACCTTCGTTTGCCAAA 59.042 47.619 0.00 0.00 0.00 3.28
955 958 2.287970 CCCTTACCTTCGTTTGCCAAAC 60.288 50.000 10.29 10.29 38.02 2.93
956 959 2.359531 CCTTACCTTCGTTTGCCAAACA 59.640 45.455 19.49 4.95 41.44 2.83
957 960 3.550030 CCTTACCTTCGTTTGCCAAACAG 60.550 47.826 19.49 10.29 41.44 3.16
958 961 0.744281 ACCTTCGTTTGCCAAACAGG 59.256 50.000 19.71 19.71 41.44 4.00
1111 1114 1.380515 TTCTGCTCCTCCTCCTCCG 60.381 63.158 0.00 0.00 0.00 4.63
1140 1143 2.612115 CCCACCTTGCCTCCTCCT 60.612 66.667 0.00 0.00 0.00 3.69
1251 3052 4.693915 CCCTCCCCTCCCAACCCA 62.694 72.222 0.00 0.00 0.00 4.51
1257 3058 0.623324 CCCCTCCCAACCCACATAGA 60.623 60.000 0.00 0.00 0.00 1.98
1294 3095 4.142359 CCACATCGCTACAAGTTAGTCTCT 60.142 45.833 0.00 0.00 0.00 3.10
1305 3106 0.032017 TTAGTCTCTGGGAGAGGGCC 60.032 60.000 0.00 0.00 42.54 5.80
1427 3232 4.613394 CGTGCAAATGAATCTAACTGTGCA 60.613 41.667 0.00 0.00 38.35 4.57
1438 3243 2.418368 AACTGTGCAACTTCTGGTCA 57.582 45.000 0.00 0.00 38.04 4.02
1496 3301 5.970023 GCAAGAACAACTGATATGCTGAATC 59.030 40.000 0.00 0.00 0.00 2.52
1581 3387 0.664224 TCGCCGAATCATACTACGCA 59.336 50.000 0.00 0.00 0.00 5.24
1722 3536 0.109179 TCTTTTCACATGCGCATGGC 60.109 50.000 43.46 2.18 42.91 4.40
1739 3553 4.799949 GCATGGCCATACATTTTATATGCG 59.200 41.667 20.30 1.35 30.67 4.73
1771 3585 0.442699 GGCTTTCAAGGCTAACGACG 59.557 55.000 5.88 0.00 46.98 5.12
1835 3650 2.185004 TGAAGGTACAAGGCTTGCTC 57.815 50.000 26.45 18.32 0.00 4.26
1839 3654 0.036875 GGTACAAGGCTTGCTCTGGT 59.963 55.000 26.45 8.99 0.00 4.00
1845 3660 3.003480 CAAGGCTTGCTCTGGTAGTAAC 58.997 50.000 15.25 0.00 0.00 2.50
1988 3803 0.452184 TAGAAGAAGCTGAGACCGCG 59.548 55.000 0.00 0.00 0.00 6.46
2111 3926 3.084579 CACGCTGGCTTCACGATC 58.915 61.111 0.00 0.00 0.00 3.69
2152 3967 3.263261 GTGGTTAGTTGCTTAGGCTCTC 58.737 50.000 0.00 0.00 39.59 3.20
2169 3984 4.320023 GCTCTCGAGTCCTATAGATCACA 58.680 47.826 13.13 0.00 0.00 3.58
2176 3991 6.887002 TCGAGTCCTATAGATCACATAGCAAT 59.113 38.462 0.00 0.00 0.00 3.56
2186 4001 2.888414 TCACATAGCAATGGCATGGATG 59.112 45.455 5.91 4.03 44.61 3.51
2187 4002 2.888414 CACATAGCAATGGCATGGATGA 59.112 45.455 5.91 0.00 44.61 2.92
2199 4067 2.551459 GCATGGATGATGTTCTAGCCAC 59.449 50.000 0.00 0.00 34.14 5.01
2219 4088 5.883661 CCACAGAAAGTTATGGCATTACTG 58.116 41.667 18.79 10.27 0.00 2.74
2255 4125 5.063060 ACATAAAACGATAACGCTGTTCCTC 59.937 40.000 0.00 0.00 43.96 3.71
2335 4205 5.419542 TGCGTTGCTTAGATCTGTAGAAAT 58.580 37.500 5.18 0.00 0.00 2.17
2340 4210 7.559845 GTTGCTTAGATCTGTAGAAATTAGCG 58.440 38.462 5.18 0.00 0.00 4.26
2343 4213 6.346199 GCTTAGATCTGTAGAAATTAGCGCAC 60.346 42.308 11.47 0.00 0.00 5.34
2349 4219 4.513442 TGTAGAAATTAGCGCACTTCCAT 58.487 39.130 11.47 0.00 0.00 3.41
2352 4222 3.127548 AGAAATTAGCGCACTTCCATGTG 59.872 43.478 11.47 0.00 40.62 3.21
2354 4224 0.036164 TTAGCGCACTTCCATGTGGT 59.964 50.000 11.47 0.00 42.98 4.16
2389 4259 5.393124 CAATTTTAGCTCAGAAACGCATCA 58.607 37.500 0.00 0.00 0.00 3.07
2465 5243 6.410243 TCAAAATTTTCCACCAAAAACGAC 57.590 33.333 0.00 0.00 37.52 4.34
2480 5258 0.810031 ACGACCTGCTGACACAACAC 60.810 55.000 0.00 0.00 0.00 3.32
2489 5267 2.826428 CTGACACAACACACTACTGCT 58.174 47.619 0.00 0.00 0.00 4.24
2509 5287 7.002879 ACTGCTACGGATTAACCTCTAAGATA 58.997 38.462 0.00 0.00 36.31 1.98
2513 5296 8.404765 GCTACGGATTAACCTCTAAGATATACC 58.595 40.741 0.00 0.00 36.31 2.73
2535 5318 2.246719 ACTGACTTCACAGGCTTGAC 57.753 50.000 1.40 0.00 41.59 3.18
2561 5344 1.429463 CACCTAAAGCACTCGGACAC 58.571 55.000 0.00 0.00 0.00 3.67
2576 5359 0.249073 GACACGAGAGCATATGCCGT 60.249 55.000 23.96 21.86 43.38 5.68
2613 5396 5.129815 ACAAAGCCCTATATACAAAGGTCGA 59.870 40.000 0.00 0.00 0.00 4.20
2626 5409 5.491982 ACAAAGGTCGAGCTTCTAATCATT 58.508 37.500 28.42 9.08 0.00 2.57
2692 5477 7.416890 CCCATTGTAACTTGGTTACTCAAAACA 60.417 37.037 17.59 0.57 45.80 2.83
2694 5479 9.528018 CATTGTAACTTGGTTACTCAAAACATT 57.472 29.630 17.59 0.00 45.80 2.71
2709 5545 3.430042 AACATTGAGATCAGGTGCACT 57.570 42.857 17.98 0.00 0.00 4.40
2711 5547 2.286872 CATTGAGATCAGGTGCACTCC 58.713 52.381 17.98 0.00 0.00 3.85
2718 5554 1.734477 CAGGTGCACTCCGTTCTCG 60.734 63.158 17.98 0.00 0.00 4.04
2738 5574 3.676172 TCGCATTGTAACTTGGTTACTCG 59.324 43.478 17.59 14.97 45.80 4.18
2745 5581 8.504005 CATTGTAACTTGGTTACTCGAAATCTT 58.496 33.333 17.59 0.00 45.80 2.40
2811 5647 1.786937 ACCTCGAGATCAGGCTTGAT 58.213 50.000 15.71 11.66 46.61 2.57
2923 5760 7.337942 AGCAATAGAAGTGCAATTAAGTTAGCT 59.662 33.333 0.00 2.96 44.74 3.32
3069 5992 3.008594 TGGTACCATTTCAGGATCAACGT 59.991 43.478 11.60 0.00 0.00 3.99
3075 5998 3.853330 CAGGATCAACGTGCGCCG 61.853 66.667 15.25 15.25 44.03 6.46
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.153549 CTAGCCCACGAGAAGGTGC 60.154 63.158 0.00 0.00 36.59 5.01
1 2 1.153549 GCTAGCCCACGAGAAGGTG 60.154 63.158 2.29 0.00 37.66 4.00
2 3 2.711922 CGCTAGCCCACGAGAAGGT 61.712 63.158 9.66 0.00 0.00 3.50
3 4 2.105128 CGCTAGCCCACGAGAAGG 59.895 66.667 9.66 0.00 0.00 3.46
4 5 2.105128 CCGCTAGCCCACGAGAAG 59.895 66.667 9.66 0.00 0.00 2.85
5 6 2.361992 TCCGCTAGCCCACGAGAA 60.362 61.111 9.66 0.00 0.00 2.87
6 7 3.138798 GTCCGCTAGCCCACGAGA 61.139 66.667 9.66 0.00 0.00 4.04
7 8 4.554363 CGTCCGCTAGCCCACGAG 62.554 72.222 22.63 2.96 34.06 4.18
10 11 4.208686 CTCCGTCCGCTAGCCCAC 62.209 72.222 9.66 4.84 0.00 4.61
13 14 3.659089 TTTGCTCCGTCCGCTAGCC 62.659 63.158 9.66 0.00 35.33 3.93
14 15 2.125673 TTTGCTCCGTCCGCTAGC 60.126 61.111 4.06 4.06 36.77 3.42
15 16 1.080093 TGTTTGCTCCGTCCGCTAG 60.080 57.895 0.00 0.00 0.00 3.42
16 17 1.373748 GTGTTTGCTCCGTCCGCTA 60.374 57.895 0.00 0.00 0.00 4.26
17 18 2.665185 GTGTTTGCTCCGTCCGCT 60.665 61.111 0.00 0.00 0.00 5.52
18 19 4.072088 CGTGTTTGCTCCGTCCGC 62.072 66.667 0.00 0.00 0.00 5.54
19 20 1.683790 GATCGTGTTTGCTCCGTCCG 61.684 60.000 0.00 0.00 0.00 4.79
20 21 0.669318 TGATCGTGTTTGCTCCGTCC 60.669 55.000 0.00 0.00 0.00 4.79
21 22 1.126846 CTTGATCGTGTTTGCTCCGTC 59.873 52.381 0.00 0.00 0.00 4.79
22 23 1.148310 CTTGATCGTGTTTGCTCCGT 58.852 50.000 0.00 0.00 0.00 4.69
23 24 1.126846 GACTTGATCGTGTTTGCTCCG 59.873 52.381 0.00 0.00 0.00 4.63
24 25 1.464997 GGACTTGATCGTGTTTGCTCC 59.535 52.381 0.00 0.00 0.00 4.70
25 26 2.143122 TGGACTTGATCGTGTTTGCTC 58.857 47.619 0.00 0.00 0.00 4.26
26 27 2.254546 TGGACTTGATCGTGTTTGCT 57.745 45.000 0.00 0.00 0.00 3.91
27 28 2.226437 ACATGGACTTGATCGTGTTTGC 59.774 45.455 0.00 0.00 0.00 3.68
28 29 3.423515 CGACATGGACTTGATCGTGTTTG 60.424 47.826 0.00 0.00 29.74 2.93
29 30 2.736721 CGACATGGACTTGATCGTGTTT 59.263 45.455 0.00 0.00 29.74 2.83
30 31 2.288825 ACGACATGGACTTGATCGTGTT 60.289 45.455 4.69 0.00 43.86 3.32
31 32 1.272490 ACGACATGGACTTGATCGTGT 59.728 47.619 4.69 0.00 43.86 4.49
32 33 1.996292 ACGACATGGACTTGATCGTG 58.004 50.000 4.69 0.00 43.86 4.35
33 34 1.996292 CACGACATGGACTTGATCGT 58.004 50.000 0.00 0.00 46.28 3.73
44 45 1.450312 GGAAGGAGGCCACGACATG 60.450 63.158 5.01 0.00 0.00 3.21
45 46 1.613630 AGGAAGGAGGCCACGACAT 60.614 57.895 5.01 0.00 0.00 3.06
46 47 2.203788 AGGAAGGAGGCCACGACA 60.204 61.111 5.01 0.00 0.00 4.35
47 48 2.579738 GAGGAAGGAGGCCACGAC 59.420 66.667 5.01 0.00 0.00 4.34
48 49 3.068691 CGAGGAAGGAGGCCACGA 61.069 66.667 5.01 0.00 41.13 4.35
49 50 4.821589 GCGAGGAAGGAGGCCACG 62.822 72.222 5.01 0.00 41.48 4.94
50 51 3.672295 CTGCGAGGAAGGAGGCCAC 62.672 68.421 5.01 0.00 0.00 5.01
51 52 3.393970 CTGCGAGGAAGGAGGCCA 61.394 66.667 5.01 0.00 0.00 5.36
52 53 4.847444 GCTGCGAGGAAGGAGGCC 62.847 72.222 0.00 0.00 0.00 5.19
53 54 3.731653 GAGCTGCGAGGAAGGAGGC 62.732 68.421 0.00 0.00 0.00 4.70
54 55 2.498726 GAGCTGCGAGGAAGGAGG 59.501 66.667 0.00 0.00 0.00 4.30
55 56 2.103934 CGAGCTGCGAGGAAGGAG 59.896 66.667 0.00 0.00 44.57 3.69
56 57 4.135153 GCGAGCTGCGAGGAAGGA 62.135 66.667 9.32 0.00 44.57 3.36
73 74 1.299926 GCACCCTATAGCGTGTCCG 60.300 63.158 16.84 0.00 32.40 4.79
74 75 4.752514 GCACCCTATAGCGTGTCC 57.247 61.111 16.84 0.49 32.40 4.02
80 81 1.371881 GAGCGACGCACCCTATAGC 60.372 63.158 23.70 0.00 0.00 2.97
81 82 1.286260 GGAGCGACGCACCCTATAG 59.714 63.158 23.79 0.00 33.27 1.31
82 83 3.440151 GGAGCGACGCACCCTATA 58.560 61.111 23.79 0.00 33.27 1.31
106 107 1.657822 GAGCAACCCGGAGAAATCTC 58.342 55.000 0.73 1.68 42.14 2.75
107 108 0.108138 CGAGCAACCCGGAGAAATCT 60.108 55.000 0.73 0.00 0.00 2.40
108 109 1.706287 GCGAGCAACCCGGAGAAATC 61.706 60.000 0.73 0.00 0.00 2.17
109 110 1.745489 GCGAGCAACCCGGAGAAAT 60.745 57.895 0.73 0.00 0.00 2.17
110 111 2.358247 GCGAGCAACCCGGAGAAA 60.358 61.111 0.73 0.00 0.00 2.52
111 112 4.735132 CGCGAGCAACCCGGAGAA 62.735 66.667 0.73 0.00 0.00 2.87
115 116 4.124351 TAGTCGCGAGCAACCCGG 62.124 66.667 10.24 0.00 0.00 5.73
116 117 1.985447 TAGTAGTCGCGAGCAACCCG 61.985 60.000 10.24 0.00 0.00 5.28
117 118 0.248539 CTAGTAGTCGCGAGCAACCC 60.249 60.000 10.24 0.00 0.00 4.11
118 119 0.248539 CCTAGTAGTCGCGAGCAACC 60.249 60.000 10.24 0.00 0.00 3.77
119 120 0.731417 TCCTAGTAGTCGCGAGCAAC 59.269 55.000 10.24 8.30 0.00 4.17
120 121 0.731417 GTCCTAGTAGTCGCGAGCAA 59.269 55.000 10.24 0.00 0.00 3.91
121 122 1.094073 GGTCCTAGTAGTCGCGAGCA 61.094 60.000 10.24 0.00 0.00 4.26
122 123 1.648174 GGTCCTAGTAGTCGCGAGC 59.352 63.158 10.24 4.59 0.00 5.03
123 124 1.165284 GGGGTCCTAGTAGTCGCGAG 61.165 65.000 10.24 0.00 0.00 5.03
124 125 1.153086 GGGGTCCTAGTAGTCGCGA 60.153 63.158 3.71 3.71 0.00 5.87
125 126 2.192187 GGGGGTCCTAGTAGTCGCG 61.192 68.421 0.00 0.00 0.00 5.87
126 127 0.469518 ATGGGGGTCCTAGTAGTCGC 60.470 60.000 0.00 0.00 0.00 5.19
127 128 1.329256 CATGGGGGTCCTAGTAGTCG 58.671 60.000 0.00 0.00 0.00 4.18
128 129 1.219724 TCCATGGGGGTCCTAGTAGTC 59.780 57.143 13.02 0.00 38.11 2.59
129 130 1.062352 GTCCATGGGGGTCCTAGTAGT 60.062 57.143 13.02 0.00 38.11 2.73
130 131 1.718280 GTCCATGGGGGTCCTAGTAG 58.282 60.000 13.02 0.00 38.11 2.57
131 132 0.105862 CGTCCATGGGGGTCCTAGTA 60.106 60.000 13.02 0.00 38.11 1.82
132 133 1.382695 CGTCCATGGGGGTCCTAGT 60.383 63.158 13.02 0.00 38.11 2.57
133 134 1.075525 TCGTCCATGGGGGTCCTAG 60.076 63.158 13.02 0.00 38.11 3.02
134 135 1.382146 GTCGTCCATGGGGGTCCTA 60.382 63.158 13.02 0.00 38.11 2.94
135 136 2.687566 GTCGTCCATGGGGGTCCT 60.688 66.667 13.02 0.00 38.11 3.85
136 137 4.157120 CGTCGTCCATGGGGGTCC 62.157 72.222 13.02 0.00 38.11 4.46
137 138 4.157120 CCGTCGTCCATGGGGGTC 62.157 72.222 13.02 1.11 38.11 4.46
138 139 4.707768 TCCGTCGTCCATGGGGGT 62.708 66.667 13.02 0.00 38.11 4.95
139 140 4.157120 GTCCGTCGTCCATGGGGG 62.157 72.222 13.02 4.11 38.37 5.40
140 141 4.508128 CGTCCGTCGTCCATGGGG 62.508 72.222 13.02 4.60 34.52 4.96
141 142 3.411418 CTCGTCCGTCGTCCATGGG 62.411 68.421 13.02 0.00 40.80 4.00
142 143 2.102357 CTCGTCCGTCGTCCATGG 59.898 66.667 4.97 4.97 40.80 3.66
143 144 2.102357 CCTCGTCCGTCGTCCATG 59.898 66.667 0.00 0.00 40.80 3.66
144 145 3.138798 CCCTCGTCCGTCGTCCAT 61.139 66.667 0.00 0.00 40.80 3.41
145 146 4.648626 ACCCTCGTCCGTCGTCCA 62.649 66.667 0.00 0.00 40.80 4.02
146 147 4.112341 CACCCTCGTCCGTCGTCC 62.112 72.222 0.00 0.00 40.80 4.79
147 148 4.112341 CCACCCTCGTCCGTCGTC 62.112 72.222 0.00 0.00 40.80 4.20
165 166 2.167219 CATACCTGCGTCTGTGCCG 61.167 63.158 0.00 0.00 0.00 5.69
166 167 0.807667 CTCATACCTGCGTCTGTGCC 60.808 60.000 0.00 0.00 0.00 5.01
167 168 0.807667 CCTCATACCTGCGTCTGTGC 60.808 60.000 0.00 0.00 0.00 4.57
168 169 0.817654 TCCTCATACCTGCGTCTGTG 59.182 55.000 0.00 0.00 0.00 3.66
169 170 1.107114 CTCCTCATACCTGCGTCTGT 58.893 55.000 0.00 0.00 0.00 3.41
170 171 0.387202 CCTCCTCATACCTGCGTCTG 59.613 60.000 0.00 0.00 0.00 3.51
171 172 1.395826 GCCTCCTCATACCTGCGTCT 61.396 60.000 0.00 0.00 0.00 4.18
172 173 1.068250 GCCTCCTCATACCTGCGTC 59.932 63.158 0.00 0.00 0.00 5.19
173 174 2.786495 CGCCTCCTCATACCTGCGT 61.786 63.158 0.00 0.00 37.44 5.24
174 175 2.028190 CGCCTCCTCATACCTGCG 59.972 66.667 0.00 0.00 35.81 5.18
175 176 1.068250 GTCGCCTCCTCATACCTGC 59.932 63.158 0.00 0.00 0.00 4.85
176 177 1.101635 TCGTCGCCTCCTCATACCTG 61.102 60.000 0.00 0.00 0.00 4.00
177 178 1.102222 GTCGTCGCCTCCTCATACCT 61.102 60.000 0.00 0.00 0.00 3.08
178 179 1.102222 AGTCGTCGCCTCCTCATACC 61.102 60.000 0.00 0.00 0.00 2.73
179 180 0.308376 GAGTCGTCGCCTCCTCATAC 59.692 60.000 0.00 0.00 0.00 2.39
180 181 0.107361 TGAGTCGTCGCCTCCTCATA 60.107 55.000 0.11 0.00 0.00 2.15
181 182 0.965866 TTGAGTCGTCGCCTCCTCAT 60.966 55.000 0.11 0.00 34.19 2.90
182 183 1.176619 TTTGAGTCGTCGCCTCCTCA 61.177 55.000 0.11 0.85 32.38 3.86
183 184 0.456995 CTTTGAGTCGTCGCCTCCTC 60.457 60.000 0.11 0.00 0.00 3.71
184 185 1.587054 CTTTGAGTCGTCGCCTCCT 59.413 57.895 0.11 0.00 0.00 3.69
185 186 2.095252 GCTTTGAGTCGTCGCCTCC 61.095 63.158 0.11 0.00 0.00 4.30
186 187 2.095252 GGCTTTGAGTCGTCGCCTC 61.095 63.158 0.00 0.00 37.76 4.70
187 188 2.048127 GGCTTTGAGTCGTCGCCT 60.048 61.111 8.61 0.00 37.76 5.52
188 189 3.479269 CGGCTTTGAGTCGTCGCC 61.479 66.667 6.37 6.37 38.73 5.54
189 190 3.479269 CCGGCTTTGAGTCGTCGC 61.479 66.667 1.10 0.00 42.67 5.19
190 191 2.758770 TTCCCGGCTTTGAGTCGTCG 62.759 60.000 0.00 0.00 42.67 5.12
191 192 0.601841 TTTCCCGGCTTTGAGTCGTC 60.602 55.000 0.00 0.00 42.67 4.20
192 193 0.602905 CTTTCCCGGCTTTGAGTCGT 60.603 55.000 0.00 0.00 42.67 4.34
193 194 1.298859 CCTTTCCCGGCTTTGAGTCG 61.299 60.000 0.00 0.00 44.05 4.18
194 195 0.960861 CCCTTTCCCGGCTTTGAGTC 60.961 60.000 0.00 0.00 0.00 3.36
195 196 1.074951 CCCTTTCCCGGCTTTGAGT 59.925 57.895 0.00 0.00 0.00 3.41
196 197 1.678970 CCCCTTTCCCGGCTTTGAG 60.679 63.158 0.00 0.00 0.00 3.02
197 198 2.438795 CCCCTTTCCCGGCTTTGA 59.561 61.111 0.00 0.00 0.00 2.69
198 199 2.679996 CCCCCTTTCCCGGCTTTG 60.680 66.667 0.00 0.00 0.00 2.77
219 220 4.722700 CCCCTGCTCCCACGGTTG 62.723 72.222 0.00 0.00 0.00 3.77
225 226 3.993865 TATCGCACCCCTGCTCCCA 62.994 63.158 0.00 0.00 41.77 4.37
226 227 2.520536 ATATCGCACCCCTGCTCCC 61.521 63.158 0.00 0.00 41.77 4.30
227 228 1.302033 CATATCGCACCCCTGCTCC 60.302 63.158 0.00 0.00 41.77 4.70
228 229 1.302033 CCATATCGCACCCCTGCTC 60.302 63.158 0.00 0.00 41.77 4.26
234 235 2.594592 GGCCACCATATCGCACCC 60.595 66.667 0.00 0.00 0.00 4.61
250 251 8.766994 TCCAAATCCCTCTAATTTAATCAAGG 57.233 34.615 0.00 0.00 0.00 3.61
263 264 1.555533 GGTTCGACTCCAAATCCCTCT 59.444 52.381 0.00 0.00 0.00 3.69
285 286 0.647410 CCACGTCGAATCTGACATGC 59.353 55.000 0.00 0.00 38.84 4.06
292 293 1.226211 CGTACGCCACGTCGAATCT 60.226 57.895 0.52 0.00 45.82 2.40
319 320 1.373497 GCGAGGCGGACATAGGATG 60.373 63.158 0.00 0.00 0.00 3.51
343 344 1.230324 GACGCCCTTCATATTCAGCC 58.770 55.000 0.00 0.00 0.00 4.85
359 360 0.947180 AACGTTTGGGATGTCCGACG 60.947 55.000 15.12 15.12 46.38 5.12
373 374 4.401202 ACCCTCAAAATCAAGTCAAACGTT 59.599 37.500 0.00 0.00 0.00 3.99
383 384 3.308402 CCCAGCTAGACCCTCAAAATCAA 60.308 47.826 0.00 0.00 0.00 2.57
384 385 2.239654 CCCAGCTAGACCCTCAAAATCA 59.760 50.000 0.00 0.00 0.00 2.57
388 389 0.984230 CACCCAGCTAGACCCTCAAA 59.016 55.000 0.00 0.00 0.00 2.69
417 418 5.527214 CGGATAGATTTAACATTGCCAGACA 59.473 40.000 0.00 0.00 0.00 3.41
420 421 5.049405 GGACGGATAGATTTAACATTGCCAG 60.049 44.000 0.00 0.00 0.00 4.85
423 424 4.084013 CCGGACGGATAGATTTAACATTGC 60.084 45.833 4.40 0.00 37.50 3.56
434 435 1.696063 CCCTAAACCGGACGGATAGA 58.304 55.000 18.80 0.00 38.96 1.98
435 436 0.677842 CCCCTAAACCGGACGGATAG 59.322 60.000 18.80 17.03 38.96 2.08
439 440 1.264045 TTACCCCCTAAACCGGACGG 61.264 60.000 9.46 9.56 42.03 4.79
442 443 1.278537 CACTTACCCCCTAAACCGGA 58.721 55.000 9.46 0.00 0.00 5.14
453 454 1.190178 ACCTGACCGTCCACTTACCC 61.190 60.000 0.00 0.00 0.00 3.69
542 544 9.829507 CCCTATGCAATTATCCAAACAAAAATA 57.170 29.630 0.00 0.00 0.00 1.40
626 629 1.683025 TTCTGGCGTATGGACCCGA 60.683 57.895 0.00 0.00 0.00 5.14
686 689 2.879233 TTCGTGGGAGGTGGCTCAC 61.879 63.158 0.00 0.00 0.00 3.51
728 731 1.433053 CCGAACCAAACACGCTGTCA 61.433 55.000 0.00 0.00 0.00 3.58
730 733 1.450669 ACCGAACCAAACACGCTGT 60.451 52.632 0.00 0.00 0.00 4.40
731 734 1.010125 CACCGAACCAAACACGCTG 60.010 57.895 0.00 0.00 0.00 5.18
732 735 2.184167 CCACCGAACCAAACACGCT 61.184 57.895 0.00 0.00 0.00 5.07
733 736 2.113131 CTCCACCGAACCAAACACGC 62.113 60.000 0.00 0.00 0.00 5.34
734 737 0.812412 ACTCCACCGAACCAAACACG 60.812 55.000 0.00 0.00 0.00 4.49
735 738 1.064952 CAACTCCACCGAACCAAACAC 59.935 52.381 0.00 0.00 0.00 3.32
736 739 1.384525 CAACTCCACCGAACCAAACA 58.615 50.000 0.00 0.00 0.00 2.83
737 740 0.666374 CCAACTCCACCGAACCAAAC 59.334 55.000 0.00 0.00 0.00 2.93
738 741 0.547075 TCCAACTCCACCGAACCAAA 59.453 50.000 0.00 0.00 0.00 3.28
739 742 0.107831 CTCCAACTCCACCGAACCAA 59.892 55.000 0.00 0.00 0.00 3.67
740 743 0.761323 TCTCCAACTCCACCGAACCA 60.761 55.000 0.00 0.00 0.00 3.67
741 744 0.037232 CTCTCCAACTCCACCGAACC 60.037 60.000 0.00 0.00 0.00 3.62
742 745 0.966920 TCTCTCCAACTCCACCGAAC 59.033 55.000 0.00 0.00 0.00 3.95
743 746 1.257743 CTCTCTCCAACTCCACCGAA 58.742 55.000 0.00 0.00 0.00 4.30
744 747 0.612174 CCTCTCTCCAACTCCACCGA 60.612 60.000 0.00 0.00 0.00 4.69
745 748 1.608717 CCCTCTCTCCAACTCCACCG 61.609 65.000 0.00 0.00 0.00 4.94
746 749 0.252284 TCCCTCTCTCCAACTCCACC 60.252 60.000 0.00 0.00 0.00 4.61
747 750 1.645710 TTCCCTCTCTCCAACTCCAC 58.354 55.000 0.00 0.00 0.00 4.02
748 751 2.191400 CATTCCCTCTCTCCAACTCCA 58.809 52.381 0.00 0.00 0.00 3.86
749 752 1.488393 CCATTCCCTCTCTCCAACTCC 59.512 57.143 0.00 0.00 0.00 3.85
750 753 1.488393 CCCATTCCCTCTCTCCAACTC 59.512 57.143 0.00 0.00 0.00 3.01
751 754 1.081174 TCCCATTCCCTCTCTCCAACT 59.919 52.381 0.00 0.00 0.00 3.16
752 755 1.488393 CTCCCATTCCCTCTCTCCAAC 59.512 57.143 0.00 0.00 0.00 3.77
753 756 1.081174 ACTCCCATTCCCTCTCTCCAA 59.919 52.381 0.00 0.00 0.00 3.53
754 757 0.719015 ACTCCCATTCCCTCTCTCCA 59.281 55.000 0.00 0.00 0.00 3.86
755 758 1.886422 AACTCCCATTCCCTCTCTCC 58.114 55.000 0.00 0.00 0.00 3.71
756 759 2.840651 TCAAACTCCCATTCCCTCTCTC 59.159 50.000 0.00 0.00 0.00 3.20
757 760 2.843113 CTCAAACTCCCATTCCCTCTCT 59.157 50.000 0.00 0.00 0.00 3.10
758 761 2.092699 CCTCAAACTCCCATTCCCTCTC 60.093 54.545 0.00 0.00 0.00 3.20
759 762 1.918957 CCTCAAACTCCCATTCCCTCT 59.081 52.381 0.00 0.00 0.00 3.69
760 763 1.683319 GCCTCAAACTCCCATTCCCTC 60.683 57.143 0.00 0.00 0.00 4.30
761 764 0.332972 GCCTCAAACTCCCATTCCCT 59.667 55.000 0.00 0.00 0.00 4.20
762 765 0.332972 AGCCTCAAACTCCCATTCCC 59.667 55.000 0.00 0.00 0.00 3.97
763 766 2.222227 AAGCCTCAAACTCCCATTCC 57.778 50.000 0.00 0.00 0.00 3.01
764 767 4.080863 TCTCTAAGCCTCAAACTCCCATTC 60.081 45.833 0.00 0.00 0.00 2.67
765 768 3.846588 TCTCTAAGCCTCAAACTCCCATT 59.153 43.478 0.00 0.00 0.00 3.16
766 769 3.454082 CTCTCTAAGCCTCAAACTCCCAT 59.546 47.826 0.00 0.00 0.00 4.00
767 770 2.834549 CTCTCTAAGCCTCAAACTCCCA 59.165 50.000 0.00 0.00 0.00 4.37
768 771 2.835156 ACTCTCTAAGCCTCAAACTCCC 59.165 50.000 0.00 0.00 0.00 4.30
769 772 3.767131 AGACTCTCTAAGCCTCAAACTCC 59.233 47.826 0.00 0.00 0.00 3.85
770 773 5.400066 AAGACTCTCTAAGCCTCAAACTC 57.600 43.478 0.00 0.00 0.00 3.01
771 774 7.364320 GGAATAAGACTCTCTAAGCCTCAAACT 60.364 40.741 0.00 0.00 0.00 2.66
772 775 6.759356 GGAATAAGACTCTCTAAGCCTCAAAC 59.241 42.308 0.00 0.00 0.00 2.93
773 776 6.670027 AGGAATAAGACTCTCTAAGCCTCAAA 59.330 38.462 0.00 0.00 0.00 2.69
774 777 6.198639 AGGAATAAGACTCTCTAAGCCTCAA 58.801 40.000 0.00 0.00 0.00 3.02
775 778 5.772004 AGGAATAAGACTCTCTAAGCCTCA 58.228 41.667 0.00 0.00 0.00 3.86
776 779 6.724893 AAGGAATAAGACTCTCTAAGCCTC 57.275 41.667 0.00 0.00 0.00 4.70
777 780 6.442244 ACAAAGGAATAAGACTCTCTAAGCCT 59.558 38.462 0.00 0.00 0.00 4.58
778 781 6.645306 ACAAAGGAATAAGACTCTCTAAGCC 58.355 40.000 0.00 0.00 0.00 4.35
779 782 8.447053 CAAACAAAGGAATAAGACTCTCTAAGC 58.553 37.037 0.00 0.00 0.00 3.09
780 783 9.495572 ACAAACAAAGGAATAAGACTCTCTAAG 57.504 33.333 0.00 0.00 0.00 2.18
781 784 9.847224 AACAAACAAAGGAATAAGACTCTCTAA 57.153 29.630 0.00 0.00 0.00 2.10
782 785 9.847224 AAACAAACAAAGGAATAAGACTCTCTA 57.153 29.630 0.00 0.00 0.00 2.43
783 786 8.753497 AAACAAACAAAGGAATAAGACTCTCT 57.247 30.769 0.00 0.00 0.00 3.10
785 788 9.067986 CCTAAACAAACAAAGGAATAAGACTCT 57.932 33.333 0.00 0.00 0.00 3.24
786 789 8.847196 ACCTAAACAAACAAAGGAATAAGACTC 58.153 33.333 0.00 0.00 33.16 3.36
787 790 8.630037 CACCTAAACAAACAAAGGAATAAGACT 58.370 33.333 0.00 0.00 33.16 3.24
788 791 7.381408 GCACCTAAACAAACAAAGGAATAAGAC 59.619 37.037 0.00 0.00 33.16 3.01
789 792 7.068839 TGCACCTAAACAAACAAAGGAATAAGA 59.931 33.333 0.00 0.00 33.16 2.10
790 793 7.206687 TGCACCTAAACAAACAAAGGAATAAG 58.793 34.615 0.00 0.00 33.16 1.73
791 794 7.113658 TGCACCTAAACAAACAAAGGAATAA 57.886 32.000 0.00 0.00 33.16 1.40
792 795 6.716934 TGCACCTAAACAAACAAAGGAATA 57.283 33.333 0.00 0.00 33.16 1.75
793 796 5.606348 TGCACCTAAACAAACAAAGGAAT 57.394 34.783 0.00 0.00 33.16 3.01
794 797 5.407407 TTGCACCTAAACAAACAAAGGAA 57.593 34.783 0.00 0.00 33.16 3.36
795 798 5.355596 CATTGCACCTAAACAAACAAAGGA 58.644 37.500 0.00 0.00 33.16 3.36
796 799 4.511082 CCATTGCACCTAAACAAACAAAGG 59.489 41.667 0.00 0.00 35.14 3.11
797 800 4.511082 CCCATTGCACCTAAACAAACAAAG 59.489 41.667 0.00 0.00 0.00 2.77
798 801 4.162320 TCCCATTGCACCTAAACAAACAAA 59.838 37.500 0.00 0.00 0.00 2.83
799 802 3.706594 TCCCATTGCACCTAAACAAACAA 59.293 39.130 0.00 0.00 0.00 2.83
800 803 3.300388 TCCCATTGCACCTAAACAAACA 58.700 40.909 0.00 0.00 0.00 2.83
801 804 4.329462 TTCCCATTGCACCTAAACAAAC 57.671 40.909 0.00 0.00 0.00 2.93
802 805 5.546526 GAATTCCCATTGCACCTAAACAAA 58.453 37.500 0.00 0.00 0.00 2.83
803 806 4.321601 CGAATTCCCATTGCACCTAAACAA 60.322 41.667 0.00 0.00 0.00 2.83
804 807 3.192422 CGAATTCCCATTGCACCTAAACA 59.808 43.478 0.00 0.00 0.00 2.83
805 808 3.442273 TCGAATTCCCATTGCACCTAAAC 59.558 43.478 0.00 0.00 0.00 2.01
806 809 3.442273 GTCGAATTCCCATTGCACCTAAA 59.558 43.478 0.00 0.00 0.00 1.85
807 810 3.013921 GTCGAATTCCCATTGCACCTAA 58.986 45.455 0.00 0.00 0.00 2.69
808 811 2.026729 TGTCGAATTCCCATTGCACCTA 60.027 45.455 0.00 0.00 0.00 3.08
809 812 1.271871 TGTCGAATTCCCATTGCACCT 60.272 47.619 0.00 0.00 0.00 4.00
810 813 1.133025 CTGTCGAATTCCCATTGCACC 59.867 52.381 0.00 0.00 0.00 5.01
811 814 1.133025 CCTGTCGAATTCCCATTGCAC 59.867 52.381 0.00 0.00 0.00 4.57
812 815 1.462616 CCTGTCGAATTCCCATTGCA 58.537 50.000 0.00 0.00 0.00 4.08
813 816 0.740737 CCCTGTCGAATTCCCATTGC 59.259 55.000 0.00 0.00 0.00 3.56
814 817 2.418368 TCCCTGTCGAATTCCCATTG 57.582 50.000 0.00 0.00 0.00 2.82
815 818 2.308866 ACTTCCCTGTCGAATTCCCATT 59.691 45.455 0.00 0.00 0.00 3.16
816 819 1.916181 ACTTCCCTGTCGAATTCCCAT 59.084 47.619 0.00 0.00 0.00 4.00
817 820 1.003118 CACTTCCCTGTCGAATTCCCA 59.997 52.381 0.00 0.00 0.00 4.37
818 821 1.278127 TCACTTCCCTGTCGAATTCCC 59.722 52.381 0.00 0.00 0.00 3.97
819 822 2.762535 TCACTTCCCTGTCGAATTCC 57.237 50.000 0.00 0.00 0.00 3.01
820 823 3.437049 CCTTTCACTTCCCTGTCGAATTC 59.563 47.826 0.00 0.00 0.00 2.17
821 824 3.412386 CCTTTCACTTCCCTGTCGAATT 58.588 45.455 0.00 0.00 0.00 2.17
822 825 2.290323 CCCTTTCACTTCCCTGTCGAAT 60.290 50.000 0.00 0.00 0.00 3.34
823 826 1.071699 CCCTTTCACTTCCCTGTCGAA 59.928 52.381 0.00 0.00 0.00 3.71
824 827 0.685097 CCCTTTCACTTCCCTGTCGA 59.315 55.000 0.00 0.00 0.00 4.20
825 828 0.321653 CCCCTTTCACTTCCCTGTCG 60.322 60.000 0.00 0.00 0.00 4.35
826 829 1.064825 TCCCCTTTCACTTCCCTGTC 58.935 55.000 0.00 0.00 0.00 3.51
827 830 1.529744 TTCCCCTTTCACTTCCCTGT 58.470 50.000 0.00 0.00 0.00 4.00
828 831 2.907458 ATTCCCCTTTCACTTCCCTG 57.093 50.000 0.00 0.00 0.00 4.45
829 832 2.721906 TGAATTCCCCTTTCACTTCCCT 59.278 45.455 2.27 0.00 0.00 4.20
830 833 2.826128 GTGAATTCCCCTTTCACTTCCC 59.174 50.000 2.27 0.00 46.03 3.97
831 834 2.488153 CGTGAATTCCCCTTTCACTTCC 59.512 50.000 12.97 0.00 46.88 3.46
832 835 3.058224 CACGTGAATTCCCCTTTCACTTC 60.058 47.826 10.90 0.00 46.88 3.01
833 836 2.884639 CACGTGAATTCCCCTTTCACTT 59.115 45.455 10.90 3.07 46.88 3.16
834 837 2.158667 ACACGTGAATTCCCCTTTCACT 60.159 45.455 25.01 0.00 46.88 3.41
835 838 2.227194 ACACGTGAATTCCCCTTTCAC 58.773 47.619 25.01 6.50 46.04 3.18
836 839 2.649531 ACACGTGAATTCCCCTTTCA 57.350 45.000 25.01 0.00 0.00 2.69
837 840 5.009310 ACTTTTACACGTGAATTCCCCTTTC 59.991 40.000 25.01 0.00 0.00 2.62
838 841 4.891168 ACTTTTACACGTGAATTCCCCTTT 59.109 37.500 25.01 0.00 0.00 3.11
839 842 4.466827 ACTTTTACACGTGAATTCCCCTT 58.533 39.130 25.01 0.00 0.00 3.95
840 843 4.070009 GACTTTTACACGTGAATTCCCCT 58.930 43.478 25.01 0.00 0.00 4.79
841 844 3.189910 GGACTTTTACACGTGAATTCCCC 59.810 47.826 25.01 10.76 0.00 4.81
842 845 3.189910 GGGACTTTTACACGTGAATTCCC 59.810 47.826 25.01 22.36 33.69 3.97
843 846 3.816523 TGGGACTTTTACACGTGAATTCC 59.183 43.478 25.01 17.77 0.00 3.01
844 847 4.514066 AGTGGGACTTTTACACGTGAATTC 59.486 41.667 25.01 9.72 39.95 2.17
845 848 4.457466 AGTGGGACTTTTACACGTGAATT 58.543 39.130 25.01 1.74 39.95 2.17
846 849 4.081322 AGTGGGACTTTTACACGTGAAT 57.919 40.909 25.01 2.62 39.95 2.57
847 850 3.547054 AGTGGGACTTTTACACGTGAA 57.453 42.857 25.01 9.45 39.95 3.18
848 851 3.547054 AAGTGGGACTTTTACACGTGA 57.453 42.857 25.01 2.68 34.11 4.35
849 852 5.235516 AGATAAGTGGGACTTTTACACGTG 58.764 41.667 15.48 15.48 39.51 4.49
850 853 5.479124 AGATAAGTGGGACTTTTACACGT 57.521 39.130 0.00 0.00 39.51 4.49
851 854 9.028185 GTAATAGATAAGTGGGACTTTTACACG 57.972 37.037 0.00 0.00 39.51 4.49
852 855 9.322773 GGTAATAGATAAGTGGGACTTTTACAC 57.677 37.037 0.00 0.00 39.51 2.90
853 856 9.275572 AGGTAATAGATAAGTGGGACTTTTACA 57.724 33.333 0.00 0.00 39.51 2.41
854 857 9.543783 CAGGTAATAGATAAGTGGGACTTTTAC 57.456 37.037 0.00 0.00 39.51 2.01
855 858 8.711170 CCAGGTAATAGATAAGTGGGACTTTTA 58.289 37.037 0.00 0.00 39.51 1.52
856 859 7.366551 CCCAGGTAATAGATAAGTGGGACTTTT 60.367 40.741 0.00 0.00 39.62 2.27
857 860 6.101296 CCCAGGTAATAGATAAGTGGGACTTT 59.899 42.308 0.00 0.00 39.62 2.66
858 861 5.607171 CCCAGGTAATAGATAAGTGGGACTT 59.393 44.000 0.00 0.00 39.62 3.01
859 862 5.155905 CCCAGGTAATAGATAAGTGGGACT 58.844 45.833 0.00 0.00 39.62 3.85
860 863 4.286291 CCCCAGGTAATAGATAAGTGGGAC 59.714 50.000 6.06 0.00 39.62 4.46
861 864 4.173244 TCCCCAGGTAATAGATAAGTGGGA 59.827 45.833 6.06 0.00 39.62 4.37
862 865 4.499472 TCCCCAGGTAATAGATAAGTGGG 58.501 47.826 0.00 0.00 38.05 4.61
863 866 4.532521 CCTCCCCAGGTAATAGATAAGTGG 59.467 50.000 0.00 0.00 34.60 4.00
864 867 4.532521 CCCTCCCCAGGTAATAGATAAGTG 59.467 50.000 0.00 0.00 38.30 3.16
865 868 4.764491 CCCTCCCCAGGTAATAGATAAGT 58.236 47.826 0.00 0.00 38.30 2.24
866 869 3.519913 GCCCTCCCCAGGTAATAGATAAG 59.480 52.174 0.00 0.00 38.30 1.73
867 870 3.146055 AGCCCTCCCCAGGTAATAGATAA 59.854 47.826 0.00 0.00 38.30 1.75
868 871 2.733637 AGCCCTCCCCAGGTAATAGATA 59.266 50.000 0.00 0.00 38.30 1.98
869 872 1.514442 AGCCCTCCCCAGGTAATAGAT 59.486 52.381 0.00 0.00 38.30 1.98
870 873 0.949582 AGCCCTCCCCAGGTAATAGA 59.050 55.000 0.00 0.00 38.30 1.98
871 874 1.059913 CAGCCCTCCCCAGGTAATAG 58.940 60.000 0.00 0.00 38.30 1.73
872 875 0.645496 TCAGCCCTCCCCAGGTAATA 59.355 55.000 0.00 0.00 38.30 0.98
873 876 0.028642 ATCAGCCCTCCCCAGGTAAT 60.029 55.000 0.00 0.00 38.30 1.89
874 877 0.645496 TATCAGCCCTCCCCAGGTAA 59.355 55.000 0.00 0.00 38.30 2.85
875 878 0.645496 TTATCAGCCCTCCCCAGGTA 59.355 55.000 0.00 0.00 38.30 3.08
876 879 0.028642 ATTATCAGCCCTCCCCAGGT 60.029 55.000 0.00 0.00 38.30 4.00
877 880 1.152649 AATTATCAGCCCTCCCCAGG 58.847 55.000 0.00 0.00 39.98 4.45
878 881 1.776667 TCAATTATCAGCCCTCCCCAG 59.223 52.381 0.00 0.00 0.00 4.45
879 882 1.776667 CTCAATTATCAGCCCTCCCCA 59.223 52.381 0.00 0.00 0.00 4.96
880 883 2.057922 TCTCAATTATCAGCCCTCCCC 58.942 52.381 0.00 0.00 0.00 4.81
881 884 3.560882 CCATCTCAATTATCAGCCCTCCC 60.561 52.174 0.00 0.00 0.00 4.30
882 885 3.560882 CCCATCTCAATTATCAGCCCTCC 60.561 52.174 0.00 0.00 0.00 4.30
883 886 3.560882 CCCCATCTCAATTATCAGCCCTC 60.561 52.174 0.00 0.00 0.00 4.30
884 887 2.377869 CCCCATCTCAATTATCAGCCCT 59.622 50.000 0.00 0.00 0.00 5.19
885 888 2.376518 TCCCCATCTCAATTATCAGCCC 59.623 50.000 0.00 0.00 0.00 5.19
886 889 3.795688 TCCCCATCTCAATTATCAGCC 57.204 47.619 0.00 0.00 0.00 4.85
887 890 4.522022 CCTTTCCCCATCTCAATTATCAGC 59.478 45.833 0.00 0.00 0.00 4.26
888 891 5.075493 CCCTTTCCCCATCTCAATTATCAG 58.925 45.833 0.00 0.00 0.00 2.90
889 892 4.731416 TCCCTTTCCCCATCTCAATTATCA 59.269 41.667 0.00 0.00 0.00 2.15
890 893 5.324832 TCCCTTTCCCCATCTCAATTATC 57.675 43.478 0.00 0.00 0.00 1.75
891 894 5.749422 TTCCCTTTCCCCATCTCAATTAT 57.251 39.130 0.00 0.00 0.00 1.28
892 895 5.749422 ATTCCCTTTCCCCATCTCAATTA 57.251 39.130 0.00 0.00 0.00 1.40
893 896 4.632105 ATTCCCTTTCCCCATCTCAATT 57.368 40.909 0.00 0.00 0.00 2.32
894 897 4.632105 AATTCCCTTTCCCCATCTCAAT 57.368 40.909 0.00 0.00 0.00 2.57
895 898 4.793520 TCTAATTCCCTTTCCCCATCTCAA 59.206 41.667 0.00 0.00 0.00 3.02
896 899 4.379875 TCTAATTCCCTTTCCCCATCTCA 58.620 43.478 0.00 0.00 0.00 3.27
897 900 4.413851 ACTCTAATTCCCTTTCCCCATCTC 59.586 45.833 0.00 0.00 0.00 2.75
898 901 4.384465 ACTCTAATTCCCTTTCCCCATCT 58.616 43.478 0.00 0.00 0.00 2.90
899 902 4.797912 ACTCTAATTCCCTTTCCCCATC 57.202 45.455 0.00 0.00 0.00 3.51
900 903 6.668133 TTAACTCTAATTCCCTTTCCCCAT 57.332 37.500 0.00 0.00 0.00 4.00
901 904 6.046286 AGTTTAACTCTAATTCCCTTTCCCCA 59.954 38.462 0.00 0.00 0.00 4.96
902 905 6.491383 AGTTTAACTCTAATTCCCTTTCCCC 58.509 40.000 0.00 0.00 0.00 4.81
903 906 6.602406 GGAGTTTAACTCTAATTCCCTTTCCC 59.398 42.308 22.26 0.13 44.46 3.97
904 907 7.403671 AGGAGTTTAACTCTAATTCCCTTTCC 58.596 38.462 22.26 4.38 44.46 3.13
908 911 8.715842 GGAATAGGAGTTTAACTCTAATTCCCT 58.284 37.037 32.65 22.09 46.45 4.20
909 912 8.905660 GGAATAGGAGTTTAACTCTAATTCCC 57.094 38.462 32.65 24.03 46.45 3.97
911 914 8.715842 AGGGGAATAGGAGTTTAACTCTAATTC 58.284 37.037 26.16 26.16 44.46 2.17
912 915 8.640033 AGGGGAATAGGAGTTTAACTCTAATT 57.360 34.615 22.26 19.92 44.46 1.40
913 916 8.640033 AAGGGGAATAGGAGTTTAACTCTAAT 57.360 34.615 22.26 13.90 44.46 1.73
914 917 8.985922 GTAAGGGGAATAGGAGTTTAACTCTAA 58.014 37.037 22.26 12.40 44.46 2.10
915 918 7.566509 GGTAAGGGGAATAGGAGTTTAACTCTA 59.433 40.741 22.26 13.70 44.46 2.43
916 919 6.386342 GGTAAGGGGAATAGGAGTTTAACTCT 59.614 42.308 22.26 12.18 44.46 3.24
917 920 6.386342 AGGTAAGGGGAATAGGAGTTTAACTC 59.614 42.308 16.07 16.07 44.32 3.01
918 921 6.277825 AGGTAAGGGGAATAGGAGTTTAACT 58.722 40.000 0.00 0.00 0.00 2.24
919 922 6.572182 AGGTAAGGGGAATAGGAGTTTAAC 57.428 41.667 0.00 0.00 0.00 2.01
920 923 6.126968 CGAAGGTAAGGGGAATAGGAGTTTAA 60.127 42.308 0.00 0.00 0.00 1.52
921 924 5.364735 CGAAGGTAAGGGGAATAGGAGTTTA 59.635 44.000 0.00 0.00 0.00 2.01
922 925 4.163649 CGAAGGTAAGGGGAATAGGAGTTT 59.836 45.833 0.00 0.00 0.00 2.66
923 926 3.710165 CGAAGGTAAGGGGAATAGGAGTT 59.290 47.826 0.00 0.00 0.00 3.01
924 927 3.306613 CGAAGGTAAGGGGAATAGGAGT 58.693 50.000 0.00 0.00 0.00 3.85
925 928 3.306613 ACGAAGGTAAGGGGAATAGGAG 58.693 50.000 0.00 0.00 0.00 3.69
926 929 3.409804 ACGAAGGTAAGGGGAATAGGA 57.590 47.619 0.00 0.00 0.00 2.94
927 930 4.196971 CAAACGAAGGTAAGGGGAATAGG 58.803 47.826 0.00 0.00 0.00 2.57
928 931 3.626217 GCAAACGAAGGTAAGGGGAATAG 59.374 47.826 0.00 0.00 0.00 1.73
929 932 3.613030 GCAAACGAAGGTAAGGGGAATA 58.387 45.455 0.00 0.00 0.00 1.75
930 933 2.443416 GCAAACGAAGGTAAGGGGAAT 58.557 47.619 0.00 0.00 0.00 3.01
931 934 1.546099 GGCAAACGAAGGTAAGGGGAA 60.546 52.381 0.00 0.00 0.00 3.97
932 935 0.037160 GGCAAACGAAGGTAAGGGGA 59.963 55.000 0.00 0.00 0.00 4.81
933 936 0.250989 TGGCAAACGAAGGTAAGGGG 60.251 55.000 0.00 0.00 0.00 4.79
934 937 1.611519 TTGGCAAACGAAGGTAAGGG 58.388 50.000 0.00 0.00 0.00 3.95
935 938 2.359531 TGTTTGGCAAACGAAGGTAAGG 59.640 45.455 31.23 0.00 44.28 2.69
936 939 3.550030 CCTGTTTGGCAAACGAAGGTAAG 60.550 47.826 31.23 22.26 44.28 2.34
937 940 2.359531 CCTGTTTGGCAAACGAAGGTAA 59.640 45.455 31.23 15.53 44.28 2.85
938 941 1.950909 CCTGTTTGGCAAACGAAGGTA 59.049 47.619 31.23 16.16 44.28 3.08
939 942 0.744281 CCTGTTTGGCAAACGAAGGT 59.256 50.000 31.23 0.00 44.28 3.50
940 943 3.568093 CCTGTTTGGCAAACGAAGG 57.432 52.632 31.23 28.37 44.28 3.46
950 953 2.672996 CCCTCACGGCCTGTTTGG 60.673 66.667 0.00 5.14 39.35 3.28
951 954 1.528309 AACCCTCACGGCCTGTTTG 60.528 57.895 0.00 0.00 33.26 2.93
952 955 1.528309 CAACCCTCACGGCCTGTTT 60.528 57.895 0.00 0.00 33.26 2.83
953 956 2.113139 CAACCCTCACGGCCTGTT 59.887 61.111 0.00 0.00 33.26 3.16
954 957 3.953775 CCAACCCTCACGGCCTGT 61.954 66.667 0.00 0.00 33.26 4.00
955 958 3.636231 TCCAACCCTCACGGCCTG 61.636 66.667 0.00 0.00 33.26 4.85
956 959 3.637273 GTCCAACCCTCACGGCCT 61.637 66.667 0.00 0.00 33.26 5.19
960 963 3.296709 CTCCCGTCCAACCCTCACG 62.297 68.421 0.00 0.00 0.00 4.35
961 964 2.663196 CTCCCGTCCAACCCTCAC 59.337 66.667 0.00 0.00 0.00 3.51
1134 1137 1.103803 CGAAGATGGTCGAAGGAGGA 58.896 55.000 0.00 0.00 43.86 3.71
1140 1143 1.153901 GTCGCCGAAGATGGTCGAA 60.154 57.895 0.00 0.00 43.86 3.71
1251 3052 6.769512 TGTGGTAGAGAAAAAGCTTCTATGT 58.230 36.000 0.00 0.00 0.00 2.29
1257 3058 3.437049 GCGATGTGGTAGAGAAAAAGCTT 59.563 43.478 0.00 0.00 0.00 3.74
1427 3232 9.334947 CACATAGATATCATTTGACCAGAAGTT 57.665 33.333 5.32 0.00 0.00 2.66
1438 3243 9.310716 CGTCTGATATGCACATAGATATCATTT 57.689 33.333 5.32 0.00 39.63 2.32
1496 3301 3.191669 TGATACGCAATGGTTTACTCCG 58.808 45.455 0.00 0.00 0.00 4.63
1581 3387 3.127548 CACAAATGCGACATAGGAGCTTT 59.872 43.478 0.00 0.00 0.00 3.51
1722 3536 8.588789 CAATTGCATCGCATATAAAATGTATGG 58.411 33.333 0.00 0.00 38.76 2.74
1771 3585 1.569708 CGCTCTTGAGCTTCTCATCC 58.430 55.000 18.75 0.00 40.39 3.51
1835 3650 5.694910 ACATTGACTGAAACGTTACTACCAG 59.305 40.000 0.00 7.07 0.00 4.00
1839 3654 7.956420 ATGAACATTGACTGAAACGTTACTA 57.044 32.000 0.00 0.00 0.00 1.82
1845 3660 7.627585 ATGAAAATGAACATTGACTGAAACG 57.372 32.000 0.69 0.00 0.00 3.60
1988 3803 2.550101 GGCATTCATCTCCTGCCGC 61.550 63.158 0.00 0.00 45.35 6.53
2111 3926 5.710099 ACCACACCATCCTACAGTTTTATTG 59.290 40.000 0.00 0.00 0.00 1.90
2152 3967 6.502136 TTGCTATGTGATCTATAGGACTCG 57.498 41.667 15.02 0.00 29.75 4.18
2169 3984 3.774734 ACATCATCCATGCCATTGCTAT 58.225 40.909 0.00 0.00 35.65 2.97
2176 3991 2.487805 GGCTAGAACATCATCCATGCCA 60.488 50.000 0.00 0.00 37.91 4.92
2186 4001 6.037610 CCATAACTTTCTGTGGCTAGAACATC 59.962 42.308 0.00 0.00 36.48 3.06
2187 4002 5.882557 CCATAACTTTCTGTGGCTAGAACAT 59.117 40.000 0.00 0.00 36.48 2.71
2239 4109 3.678072 TCAAAAGAGGAACAGCGTTATCG 59.322 43.478 0.00 0.00 40.37 2.92
2293 4163 8.859156 GCAACGCAAAGATTTTCAAAGATAATA 58.141 29.630 0.00 0.00 0.00 0.98
2301 4171 5.826586 TCTAAGCAACGCAAAGATTTTCAA 58.173 33.333 0.00 0.00 0.00 2.69
2312 4182 4.450082 TTCTACAGATCTAAGCAACGCA 57.550 40.909 0.00 0.00 0.00 5.24
2313 4183 5.975410 ATTTCTACAGATCTAAGCAACGC 57.025 39.130 0.00 0.00 0.00 4.84
2335 4205 0.036164 ACCACATGGAAGTGCGCTAA 59.964 50.000 9.73 0.00 38.18 3.09
2340 4210 4.519540 AATGTTAACCACATGGAAGTGC 57.480 40.909 4.53 0.00 46.23 4.40
2343 4213 4.165779 GCGAAATGTTAACCACATGGAAG 58.834 43.478 4.53 0.00 46.23 3.46
2349 4219 4.592485 AATTGGCGAAATGTTAACCACA 57.408 36.364 2.48 0.00 40.71 4.17
2352 4222 5.867174 AGCTAAAATTGGCGAAATGTTAACC 59.133 36.000 2.48 0.00 39.88 2.85
2354 4224 6.682746 TGAGCTAAAATTGGCGAAATGTTAA 58.317 32.000 0.00 0.00 39.88 2.01
2363 4233 3.163594 CGTTTCTGAGCTAAAATTGGCG 58.836 45.455 0.00 0.00 39.88 5.69
2389 4259 1.078848 GGACAGCATCTTGAGCCGT 60.079 57.895 0.00 0.00 0.00 5.68
2465 5243 1.867233 GTAGTGTGTTGTGTCAGCAGG 59.133 52.381 0.00 0.00 0.00 4.85
2480 5258 4.338682 AGAGGTTAATCCGTAGCAGTAGTG 59.661 45.833 0.00 0.00 41.99 2.74
2489 5267 9.812347 TTGGTATATCTTAGAGGTTAATCCGTA 57.188 33.333 0.00 0.00 41.99 4.02
2509 5287 3.073062 AGCCTGTGAAGTCAGTTTGGTAT 59.927 43.478 0.00 0.00 34.02 2.73
2513 5296 2.945008 TCAAGCCTGTGAAGTCAGTTTG 59.055 45.455 0.00 0.00 34.02 2.93
2535 5318 2.012673 GAGTGCTTTAGGTGCCTCATG 58.987 52.381 0.00 0.00 32.20 3.07
2561 5344 2.134201 TGTAACGGCATATGCTCTCG 57.866 50.000 26.12 22.27 41.70 4.04
2651 5434 1.194781 ATGGGAGAACCGAGTGCAGT 61.195 55.000 0.00 0.00 44.64 4.40
2692 5477 1.134580 CGGAGTGCACCTGATCTCAAT 60.135 52.381 14.63 0.00 0.00 2.57
2694 5479 0.900182 ACGGAGTGCACCTGATCTCA 60.900 55.000 14.63 0.00 42.51 3.27
2709 5545 2.734606 CAAGTTACAATGCGAGAACGGA 59.265 45.455 0.00 0.00 44.78 4.69
2711 5547 2.478894 ACCAAGTTACAATGCGAGAACG 59.521 45.455 0.00 0.00 42.93 3.95
2738 5574 4.260170 AGTGCACCTGATCTCAAGATTTC 58.740 43.478 14.63 0.00 34.37 2.17
2745 5581 0.900182 ACCGAGTGCACCTGATCTCA 60.900 55.000 14.63 0.00 0.00 3.27
2811 5647 7.812690 ACATTGATGCAGAAATCATTAGCTA 57.187 32.000 0.00 0.00 36.48 3.32
2923 5760 6.241645 ACATCATCGATATCACTCCAGTAGA 58.758 40.000 0.00 0.00 0.00 2.59
2986 5823 9.000486 CAGATCAAGAGGTAATGACGTACTATA 58.000 37.037 0.00 0.00 0.00 1.31
2988 5825 7.052248 TCAGATCAAGAGGTAATGACGTACTA 58.948 38.462 0.00 0.00 0.00 1.82
2996 5919 9.347240 ACCATTTTATCAGATCAAGAGGTAATG 57.653 33.333 0.00 4.34 0.00 1.90
3069 5992 1.005512 TTCAGCTTCTTACGGCGCA 60.006 52.632 10.83 0.00 0.00 6.09


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.