Multiple sequence alignment - TraesCS4D01G205100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G205100 chr4D 100.000 2471 0 0 1 2471 352578985 352581455 0.000000e+00 4564.0
1 TraesCS4D01G205100 chr4D 95.806 453 17 2 29 480 352572932 352573383 0.000000e+00 730.0
2 TraesCS4D01G205100 chr4D 86.237 683 64 18 803 1472 352524833 352525498 0.000000e+00 713.0
3 TraesCS4D01G205100 chr4A 90.006 1681 74 30 698 2310 112847347 112845693 0.000000e+00 2087.0
4 TraesCS4D01G205100 chr4A 94.126 715 42 0 767 1481 112853618 112852904 0.000000e+00 1088.0
5 TraesCS4D01G205100 chr4A 86.735 686 62 18 803 1470 112858264 112857590 0.000000e+00 736.0
6 TraesCS4D01G205100 chr4A 81.910 398 59 9 9 400 120440958 120441348 8.520000e-85 324.0
7 TraesCS4D01G205100 chr4A 93.478 92 5 1 2380 2471 112844956 112844866 4.290000e-28 135.0
8 TraesCS4D01G205100 chr4A 85.827 127 13 2 515 637 112853812 112853687 1.990000e-26 130.0
9 TraesCS4D01G205100 chr4A 91.250 80 5 2 2310 2388 112845646 112845568 9.340000e-20 108.0
10 TraesCS4D01G205100 chr4B 92.862 1429 67 6 661 2059 436102223 436103646 0.000000e+00 2041.0
11 TraesCS4D01G205100 chr4B 87.007 685 65 15 803 1472 436098272 436098947 0.000000e+00 750.0
12 TraesCS4D01G205100 chr4B 89.558 249 12 6 2059 2295 436103680 436103926 1.110000e-78 303.0
13 TraesCS4D01G205100 chr4B 96.000 50 2 0 2317 2366 436103982 436104031 5.660000e-12 82.4
14 TraesCS4D01G205100 chr5D 95.249 442 21 0 1022 1463 358798407 358798848 0.000000e+00 701.0
15 TraesCS4D01G205100 chr5D 84.106 302 39 8 29 326 80200334 80200630 1.450000e-72 283.0
16 TraesCS4D01G205100 chr5B 95.249 442 21 0 1022 1463 423796206 423796647 0.000000e+00 701.0
17 TraesCS4D01G205100 chr5B 80.802 474 66 24 20 480 484821400 484821861 5.060000e-92 348.0
18 TraesCS4D01G205100 chr5B 80.645 465 63 24 29 480 594738645 594739095 3.940000e-88 335.0
19 TraesCS4D01G205100 chr5B 79.556 450 66 25 44 480 484806792 484807228 5.170000e-77 298.0
20 TraesCS4D01G205100 chr5B 80.882 408 51 21 85 480 594744134 594744526 1.860000e-76 296.0
21 TraesCS4D01G205100 chr5A 95.023 442 22 0 1022 1463 459542701 459543142 0.000000e+00 695.0
22 TraesCS4D01G205100 chr7D 81.214 873 117 35 777 1619 548696941 548697796 0.000000e+00 660.0
23 TraesCS4D01G205100 chr7D 83.951 81 10 3 803 882 548782219 548782141 9.480000e-10 75.0
24 TraesCS4D01G205100 chr7A 85.761 611 58 13 1021 1619 632532129 632532722 9.710000e-174 619.0
25 TraesCS4D01G205100 chr7A 82.479 702 81 23 794 1476 632526430 632527108 5.930000e-161 577.0
26 TraesCS4D01G205100 chr7A 89.885 435 35 1 1031 1465 632581681 632581256 3.590000e-153 551.0
27 TraesCS4D01G205100 chr7A 82.278 79 14 0 803 881 632551310 632551232 4.410000e-08 69.4
28 TraesCS4D01G205100 chr7B 85.154 586 57 17 1031 1605 592355309 592354743 7.670000e-160 573.0
29 TraesCS4D01G205100 chr7B 83.095 349 46 11 29 371 115501959 115502300 3.090000e-79 305.0
30 TraesCS4D01G205100 chr2A 81.053 380 52 18 29 400 345486220 345486587 4.020000e-73 285.0
31 TraesCS4D01G205100 chr2B 83.824 136 12 6 2185 2310 168838730 168838595 1.200000e-23 121.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G205100 chr4D 352578985 352581455 2470 False 4564.000000 4564 100.00000 1 2471 1 chr4D.!!$F3 2470
1 TraesCS4D01G205100 chr4D 352524833 352525498 665 False 713.000000 713 86.23700 803 1472 1 chr4D.!!$F1 669
2 TraesCS4D01G205100 chr4A 112844866 112847347 2481 True 776.666667 2087 91.57800 698 2471 3 chr4A.!!$R1 1773
3 TraesCS4D01G205100 chr4A 112852904 112858264 5360 True 651.333333 1088 88.89600 515 1481 3 chr4A.!!$R2 966
4 TraesCS4D01G205100 chr4B 436098272 436104031 5759 False 794.100000 2041 91.35675 661 2366 4 chr4B.!!$F1 1705
5 TraesCS4D01G205100 chr7D 548696941 548697796 855 False 660.000000 660 81.21400 777 1619 1 chr7D.!!$F1 842
6 TraesCS4D01G205100 chr7A 632532129 632532722 593 False 619.000000 619 85.76100 1021 1619 1 chr7A.!!$F2 598
7 TraesCS4D01G205100 chr7A 632526430 632527108 678 False 577.000000 577 82.47900 794 1476 1 chr7A.!!$F1 682
8 TraesCS4D01G205100 chr7B 592354743 592355309 566 True 573.000000 573 85.15400 1031 1605 1 chr7B.!!$R1 574

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
316 317 0.03467 GCTTGTGGAGAGGGCATTCT 60.035 55.0 0.0 0.0 0.0 2.4 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1799 6153 0.759346 GGATGGAGTTGCCGGAGTAT 59.241 55.0 5.05 0.0 40.66 2.12 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.670401 GGACAAGACTGCTTTCAACG 57.330 50.000 0.00 0.00 30.14 4.10
20 21 1.264288 GGACAAGACTGCTTTCAACGG 59.736 52.381 0.00 0.00 30.14 4.44
21 22 1.264288 GACAAGACTGCTTTCAACGGG 59.736 52.381 0.00 0.00 30.14 5.28
22 23 0.593128 CAAGACTGCTTTCAACGGGG 59.407 55.000 0.00 0.00 30.14 5.73
23 24 0.537371 AAGACTGCTTTCAACGGGGG 60.537 55.000 0.00 0.00 0.00 5.40
38 39 3.577389 GGGGGAATTGTCAGGACAG 57.423 57.895 2.01 0.00 42.94 3.51
40 41 1.065126 GGGGGAATTGTCAGGACAGAG 60.065 57.143 2.01 0.00 42.94 3.35
41 42 1.630878 GGGGAATTGTCAGGACAGAGT 59.369 52.381 2.01 0.00 42.94 3.24
42 43 2.040412 GGGGAATTGTCAGGACAGAGTT 59.960 50.000 2.01 0.23 42.94 3.01
43 44 3.263425 GGGGAATTGTCAGGACAGAGTTA 59.737 47.826 2.01 0.00 42.94 2.24
45 46 4.262894 GGGAATTGTCAGGACAGAGTTACA 60.263 45.833 2.01 0.00 42.94 2.41
46 47 4.932200 GGAATTGTCAGGACAGAGTTACAG 59.068 45.833 2.01 0.00 42.94 2.74
49 50 2.628178 TGTCAGGACAGAGTTACAGGTG 59.372 50.000 0.00 0.00 36.21 4.00
50 51 2.891580 GTCAGGACAGAGTTACAGGTGA 59.108 50.000 0.00 0.00 0.00 4.02
51 52 2.891580 TCAGGACAGAGTTACAGGTGAC 59.108 50.000 0.00 0.00 0.00 3.67
52 53 2.628178 CAGGACAGAGTTACAGGTGACA 59.372 50.000 0.00 0.00 0.00 3.58
53 54 3.069586 CAGGACAGAGTTACAGGTGACAA 59.930 47.826 0.00 0.00 0.00 3.18
54 55 3.709653 AGGACAGAGTTACAGGTGACAAA 59.290 43.478 0.00 0.00 0.00 2.83
55 56 3.808174 GGACAGAGTTACAGGTGACAAAC 59.192 47.826 0.00 0.00 0.00 2.93
56 57 4.439057 GACAGAGTTACAGGTGACAAACA 58.561 43.478 0.00 0.00 0.00 2.83
57 58 4.442706 ACAGAGTTACAGGTGACAAACAG 58.557 43.478 0.00 0.00 0.00 3.16
58 59 4.081087 ACAGAGTTACAGGTGACAAACAGT 60.081 41.667 0.00 0.00 0.00 3.55
59 60 4.876107 CAGAGTTACAGGTGACAAACAGTT 59.124 41.667 0.00 0.00 0.00 3.16
60 61 6.046593 CAGAGTTACAGGTGACAAACAGTTA 58.953 40.000 0.00 0.00 0.00 2.24
62 63 6.097839 AGAGTTACAGGTGACAAACAGTTAGA 59.902 38.462 0.00 0.00 0.00 2.10
63 64 6.646267 AGTTACAGGTGACAAACAGTTAGAA 58.354 36.000 0.00 0.00 0.00 2.10
64 65 6.761714 AGTTACAGGTGACAAACAGTTAGAAG 59.238 38.462 0.00 0.00 0.00 2.85
67 68 3.136626 AGGTGACAAACAGTTAGAAGCCT 59.863 43.478 0.00 0.00 0.00 4.58
68 69 4.347000 AGGTGACAAACAGTTAGAAGCCTA 59.653 41.667 0.00 0.00 0.00 3.93
71 72 5.526111 GTGACAAACAGTTAGAAGCCTACAA 59.474 40.000 0.00 0.00 0.00 2.41
72 73 6.204882 GTGACAAACAGTTAGAAGCCTACAAT 59.795 38.462 0.00 0.00 0.00 2.71
73 74 7.386848 GTGACAAACAGTTAGAAGCCTACAATA 59.613 37.037 0.00 0.00 0.00 1.90
74 75 7.386848 TGACAAACAGTTAGAAGCCTACAATAC 59.613 37.037 0.00 0.00 0.00 1.89
76 77 5.007385 ACAGTTAGAAGCCTACAATACCG 57.993 43.478 0.00 0.00 0.00 4.02
77 78 4.465305 ACAGTTAGAAGCCTACAATACCGT 59.535 41.667 0.00 0.00 0.00 4.83
79 80 5.873164 CAGTTAGAAGCCTACAATACCGTTT 59.127 40.000 0.00 0.00 0.00 3.60
81 82 4.546829 AGAAGCCTACAATACCGTTTCA 57.453 40.909 0.00 0.00 0.00 2.69
82 83 5.099042 AGAAGCCTACAATACCGTTTCAT 57.901 39.130 0.00 0.00 0.00 2.57
83 84 5.497474 AGAAGCCTACAATACCGTTTCATT 58.503 37.500 0.00 0.00 0.00 2.57
84 85 5.944007 AGAAGCCTACAATACCGTTTCATTT 59.056 36.000 0.00 0.00 0.00 2.32
85 86 5.560966 AGCCTACAATACCGTTTCATTTG 57.439 39.130 0.00 0.00 0.00 2.32
86 87 5.007682 AGCCTACAATACCGTTTCATTTGT 58.992 37.500 0.00 0.00 35.00 2.83
87 88 5.123344 AGCCTACAATACCGTTTCATTTGTC 59.877 40.000 0.00 0.00 33.03 3.18
88 89 5.675323 GCCTACAATACCGTTTCATTTGTCC 60.675 44.000 0.00 0.00 33.03 4.02
89 90 5.413213 CCTACAATACCGTTTCATTTGTCCA 59.587 40.000 0.00 0.00 33.03 4.02
91 92 5.768317 ACAATACCGTTTCATTTGTCCAAG 58.232 37.500 0.00 0.00 0.00 3.61
93 94 5.880054 ATACCGTTTCATTTGTCCAAGAG 57.120 39.130 0.00 0.00 0.00 2.85
94 95 2.293399 ACCGTTTCATTTGTCCAAGAGC 59.707 45.455 0.00 0.00 0.00 4.09
96 97 3.057315 CCGTTTCATTTGTCCAAGAGCAT 60.057 43.478 0.00 0.00 0.00 3.79
97 98 4.155826 CCGTTTCATTTGTCCAAGAGCATA 59.844 41.667 0.00 0.00 0.00 3.14
98 99 5.327091 CGTTTCATTTGTCCAAGAGCATAG 58.673 41.667 0.00 0.00 0.00 2.23
100 101 3.954200 TCATTTGTCCAAGAGCATAGCA 58.046 40.909 0.00 0.00 0.00 3.49
101 102 3.943381 TCATTTGTCCAAGAGCATAGCAG 59.057 43.478 0.00 0.00 0.00 4.24
104 105 1.144716 TCCAAGAGCATAGCAGCCG 59.855 57.895 0.00 0.00 34.23 5.52
107 108 1.227089 AAGAGCATAGCAGCCGTCG 60.227 57.895 0.00 0.00 34.23 5.12
109 110 1.006805 GAGCATAGCAGCCGTCGAT 60.007 57.895 0.00 0.00 34.23 3.59
110 111 0.598680 GAGCATAGCAGCCGTCGATT 60.599 55.000 0.00 0.00 34.23 3.34
111 112 0.598680 AGCATAGCAGCCGTCGATTC 60.599 55.000 0.00 0.00 34.23 2.52
112 113 0.875908 GCATAGCAGCCGTCGATTCA 60.876 55.000 0.00 0.00 0.00 2.57
113 114 0.855349 CATAGCAGCCGTCGATTCAC 59.145 55.000 0.00 0.00 0.00 3.18
114 115 0.595053 ATAGCAGCCGTCGATTCACG 60.595 55.000 0.00 0.00 44.09 4.35
125 126 0.997226 CGATTCACGATCCTACGGCG 60.997 60.000 4.80 4.80 45.77 6.46
127 128 2.694829 ATTCACGATCCTACGGCGCC 62.695 60.000 19.07 19.07 37.61 6.53
128 129 4.201679 CACGATCCTACGGCGCCA 62.202 66.667 28.98 6.55 37.61 5.69
129 130 3.900892 ACGATCCTACGGCGCCAG 61.901 66.667 28.98 21.29 37.61 4.85
130 131 3.900892 CGATCCTACGGCGCCAGT 61.901 66.667 28.98 25.75 0.00 4.00
131 132 2.279517 GATCCTACGGCGCCAGTG 60.280 66.667 28.98 13.29 0.00 3.66
132 133 2.758327 ATCCTACGGCGCCAGTGA 60.758 61.111 28.98 18.39 0.00 3.41
133 134 2.292794 GATCCTACGGCGCCAGTGAA 62.293 60.000 28.98 14.33 0.00 3.18
135 136 2.261671 CTACGGCGCCAGTGAACT 59.738 61.111 28.98 5.47 0.00 3.01
136 137 1.374252 CTACGGCGCCAGTGAACTT 60.374 57.895 28.98 4.75 0.00 2.66
137 138 0.108992 CTACGGCGCCAGTGAACTTA 60.109 55.000 28.98 8.06 0.00 2.24
139 140 2.388232 CGGCGCCAGTGAACTTACC 61.388 63.158 28.98 0.00 0.00 2.85
140 141 2.388232 GGCGCCAGTGAACTTACCG 61.388 63.158 24.80 0.00 0.00 4.02
142 143 1.374252 CGCCAGTGAACTTACCGCT 60.374 57.895 0.00 0.00 0.00 5.52
143 144 0.949105 CGCCAGTGAACTTACCGCTT 60.949 55.000 0.00 0.00 0.00 4.68
144 145 0.796927 GCCAGTGAACTTACCGCTTC 59.203 55.000 0.00 0.00 0.00 3.86
145 146 1.068474 CCAGTGAACTTACCGCTTCG 58.932 55.000 0.00 0.00 0.00 3.79
146 147 0.438830 CAGTGAACTTACCGCTTCGC 59.561 55.000 0.00 0.00 0.00 4.70
158 159 2.446341 GCTTCGCGCTAAAGTGACT 58.554 52.632 17.35 0.00 35.14 3.41
159 160 0.367210 GCTTCGCGCTAAAGTGACTC 59.633 55.000 17.35 1.32 35.14 3.36
160 161 1.698165 CTTCGCGCTAAAGTGACTCA 58.302 50.000 5.56 0.00 0.00 3.41
165 166 1.997669 CGCTAAAGTGACTCACTCCC 58.002 55.000 12.22 1.21 44.62 4.30
166 167 1.272490 CGCTAAAGTGACTCACTCCCA 59.728 52.381 12.22 0.46 44.62 4.37
170 171 1.821061 AAGTGACTCACTCCCAGCCG 61.821 60.000 12.22 0.00 44.62 5.52
171 172 2.203640 TGACTCACTCCCAGCCGT 60.204 61.111 0.00 0.00 0.00 5.68
172 173 1.837051 TGACTCACTCCCAGCCGTT 60.837 57.895 0.00 0.00 0.00 4.44
173 174 1.374758 GACTCACTCCCAGCCGTTG 60.375 63.158 0.00 0.00 0.00 4.10
174 175 1.816863 GACTCACTCCCAGCCGTTGA 61.817 60.000 0.00 0.00 0.00 3.18
175 176 1.194781 ACTCACTCCCAGCCGTTGAT 61.195 55.000 0.00 0.00 0.00 2.57
177 178 0.904865 TCACTCCCAGCCGTTGATCT 60.905 55.000 0.00 0.00 0.00 2.75
183 184 1.134280 CCCAGCCGTTGATCTCAAGAT 60.134 52.381 0.00 0.00 36.39 2.40
184 185 1.938577 CCAGCCGTTGATCTCAAGATG 59.061 52.381 0.00 0.00 36.39 2.90
185 186 2.625737 CAGCCGTTGATCTCAAGATGT 58.374 47.619 0.00 0.00 36.39 3.06
186 187 2.350804 CAGCCGTTGATCTCAAGATGTG 59.649 50.000 0.00 0.00 36.39 3.21
188 189 1.325640 CCGTTGATCTCAAGATGTGCG 59.674 52.381 0.00 0.00 36.39 5.34
189 190 1.325640 CGTTGATCTCAAGATGTGCGG 59.674 52.381 0.00 0.00 36.39 5.69
192 193 1.216122 GATCTCAAGATGTGCGGCTC 58.784 55.000 0.00 0.00 34.37 4.70
193 194 0.538584 ATCTCAAGATGTGCGGCTCA 59.461 50.000 7.24 7.24 32.68 4.26
194 195 0.538584 TCTCAAGATGTGCGGCTCAT 59.461 50.000 16.60 16.60 0.00 2.90
195 196 0.656259 CTCAAGATGTGCGGCTCATG 59.344 55.000 20.91 9.59 0.00 3.07
196 197 1.063649 CAAGATGTGCGGCTCATGC 59.936 57.895 20.91 12.56 38.76 4.06
219 220 5.385396 CGTTGTAACGTCTCTTTTGAACT 57.615 39.130 8.87 0.00 46.63 3.01
220 221 5.792631 CGTTGTAACGTCTCTTTTGAACTT 58.207 37.500 8.87 0.00 46.63 2.66
221 222 6.245724 CGTTGTAACGTCTCTTTTGAACTTT 58.754 36.000 8.87 0.00 46.63 2.66
222 223 7.393327 CGTTGTAACGTCTCTTTTGAACTTTA 58.607 34.615 8.87 0.00 46.63 1.85
223 224 7.369026 CGTTGTAACGTCTCTTTTGAACTTTAC 59.631 37.037 8.87 0.00 46.63 2.01
224 225 7.237920 TGTAACGTCTCTTTTGAACTTTACC 57.762 36.000 0.00 0.00 31.54 2.85
226 227 4.132336 ACGTCTCTTTTGAACTTTACCCC 58.868 43.478 0.00 0.00 0.00 4.95
227 228 4.131596 CGTCTCTTTTGAACTTTACCCCA 58.868 43.478 0.00 0.00 0.00 4.96
228 229 4.213482 CGTCTCTTTTGAACTTTACCCCAG 59.787 45.833 0.00 0.00 0.00 4.45
230 231 5.470437 GTCTCTTTTGAACTTTACCCCAGAG 59.530 44.000 0.00 0.00 0.00 3.35
231 232 4.142038 TCTTTTGAACTTTACCCCAGAGC 58.858 43.478 0.00 0.00 0.00 4.09
232 233 3.876309 TTTGAACTTTACCCCAGAGCT 57.124 42.857 0.00 0.00 0.00 4.09
233 234 4.986054 TTTGAACTTTACCCCAGAGCTA 57.014 40.909 0.00 0.00 0.00 3.32
234 235 5.514500 TTTGAACTTTACCCCAGAGCTAT 57.486 39.130 0.00 0.00 0.00 2.97
235 236 4.487714 TGAACTTTACCCCAGAGCTATG 57.512 45.455 0.00 0.00 0.00 2.23
236 237 3.844211 TGAACTTTACCCCAGAGCTATGT 59.156 43.478 7.70 0.00 0.00 2.29
237 238 5.027460 TGAACTTTACCCCAGAGCTATGTA 58.973 41.667 7.70 0.00 0.00 2.29
239 240 5.354842 ACTTTACCCCAGAGCTATGTAAC 57.645 43.478 7.70 0.00 0.00 2.50
240 241 5.030820 ACTTTACCCCAGAGCTATGTAACT 58.969 41.667 7.70 0.00 0.00 2.24
242 243 3.116096 ACCCCAGAGCTATGTAACTGA 57.884 47.619 7.70 0.00 32.90 3.41
243 244 3.450904 ACCCCAGAGCTATGTAACTGAA 58.549 45.455 7.70 0.00 32.90 3.02
244 245 3.197983 ACCCCAGAGCTATGTAACTGAAC 59.802 47.826 7.70 0.00 32.90 3.18
246 247 3.452627 CCCAGAGCTATGTAACTGAACCT 59.547 47.826 7.70 0.00 32.90 3.50
248 249 4.081420 CCAGAGCTATGTAACTGAACCTGT 60.081 45.833 7.70 0.00 32.90 4.00
251 252 2.603560 GCTATGTAACTGAACCTGTCGC 59.396 50.000 0.00 0.00 0.00 5.19
252 253 3.676324 GCTATGTAACTGAACCTGTCGCT 60.676 47.826 0.00 0.00 0.00 4.93
253 254 4.439700 GCTATGTAACTGAACCTGTCGCTA 60.440 45.833 0.00 0.00 0.00 4.26
254 255 4.737855 ATGTAACTGAACCTGTCGCTAT 57.262 40.909 0.00 0.00 0.00 2.97
256 257 3.762288 TGTAACTGAACCTGTCGCTATCT 59.238 43.478 0.00 0.00 0.00 1.98
257 258 3.963428 AACTGAACCTGTCGCTATCTT 57.037 42.857 0.00 0.00 0.00 2.40
259 260 1.929836 CTGAACCTGTCGCTATCTTGC 59.070 52.381 0.00 0.00 0.00 4.01
260 261 1.550524 TGAACCTGTCGCTATCTTGCT 59.449 47.619 0.00 0.00 0.00 3.91
262 263 2.770164 ACCTGTCGCTATCTTGCTTT 57.230 45.000 0.00 0.00 0.00 3.51
263 264 3.059352 ACCTGTCGCTATCTTGCTTTT 57.941 42.857 0.00 0.00 0.00 2.27
265 266 3.002791 CCTGTCGCTATCTTGCTTTTCA 58.997 45.455 0.00 0.00 0.00 2.69
266 267 3.181516 CCTGTCGCTATCTTGCTTTTCAC 60.182 47.826 0.00 0.00 0.00 3.18
268 269 3.003480 GTCGCTATCTTGCTTTTCACCT 58.997 45.455 0.00 0.00 0.00 4.00
269 270 3.002791 TCGCTATCTTGCTTTTCACCTG 58.997 45.455 0.00 0.00 0.00 4.00
271 272 2.751806 GCTATCTTGCTTTTCACCTGCT 59.248 45.455 0.00 0.00 0.00 4.24
272 273 3.181502 GCTATCTTGCTTTTCACCTGCTC 60.182 47.826 0.00 0.00 0.00 4.26
275 276 0.944386 TTGCTTTTCACCTGCTCGAC 59.056 50.000 0.00 0.00 0.00 4.20
276 277 0.884704 TGCTTTTCACCTGCTCGACC 60.885 55.000 0.00 0.00 0.00 4.79
277 278 1.578206 GCTTTTCACCTGCTCGACCC 61.578 60.000 0.00 0.00 0.00 4.46
278 279 0.955919 CTTTTCACCTGCTCGACCCC 60.956 60.000 0.00 0.00 0.00 4.95
279 280 1.415672 TTTTCACCTGCTCGACCCCT 61.416 55.000 0.00 0.00 0.00 4.79
281 282 1.415672 TTCACCTGCTCGACCCCTTT 61.416 55.000 0.00 0.00 0.00 3.11
282 283 1.073199 CACCTGCTCGACCCCTTTT 59.927 57.895 0.00 0.00 0.00 2.27
283 284 0.537371 CACCTGCTCGACCCCTTTTT 60.537 55.000 0.00 0.00 0.00 1.94
284 285 1.061546 ACCTGCTCGACCCCTTTTTA 58.938 50.000 0.00 0.00 0.00 1.52
285 286 1.422402 ACCTGCTCGACCCCTTTTTAA 59.578 47.619 0.00 0.00 0.00 1.52
286 287 2.084546 CCTGCTCGACCCCTTTTTAAG 58.915 52.381 0.00 0.00 0.00 1.85
288 289 1.073284 TGCTCGACCCCTTTTTAAGCT 59.927 47.619 0.00 0.00 0.00 3.74
290 291 2.615747 GCTCGACCCCTTTTTAAGCTCT 60.616 50.000 0.00 0.00 0.00 4.09
292 293 2.027469 TCGACCCCTTTTTAAGCTCTCC 60.027 50.000 0.00 0.00 0.00 3.71
293 294 2.027100 CGACCCCTTTTTAAGCTCTCCT 60.027 50.000 0.00 0.00 0.00 3.69
295 296 2.309162 ACCCCTTTTTAAGCTCTCCTCC 59.691 50.000 0.00 0.00 0.00 4.30
296 297 2.633488 CCCTTTTTAAGCTCTCCTCCG 58.367 52.381 0.00 0.00 0.00 4.63
297 298 2.633488 CCTTTTTAAGCTCTCCTCCGG 58.367 52.381 0.00 0.00 0.00 5.14
298 299 2.010497 CTTTTTAAGCTCTCCTCCGGC 58.990 52.381 0.00 0.00 0.00 6.13
299 300 1.276622 TTTTAAGCTCTCCTCCGGCT 58.723 50.000 0.00 0.00 37.99 5.52
300 301 1.276622 TTTAAGCTCTCCTCCGGCTT 58.723 50.000 0.00 0.00 46.21 4.35
302 303 0.614979 TAAGCTCTCCTCCGGCTTGT 60.615 55.000 0.00 0.00 44.53 3.16
303 304 2.125350 GCTCTCCTCCGGCTTGTG 60.125 66.667 0.00 0.00 0.00 3.33
305 306 1.984570 CTCTCCTCCGGCTTGTGGA 60.985 63.158 0.00 0.00 0.00 4.02
310 311 3.003173 TCCGGCTTGTGGAGAGGG 61.003 66.667 0.00 0.00 0.00 4.30
311 312 4.785453 CCGGCTTGTGGAGAGGGC 62.785 72.222 0.00 0.00 0.00 5.19
312 313 4.020617 CGGCTTGTGGAGAGGGCA 62.021 66.667 0.00 0.00 0.00 5.36
316 317 0.034670 GCTTGTGGAGAGGGCATTCT 60.035 55.000 0.00 0.00 0.00 2.40
317 318 1.747709 CTTGTGGAGAGGGCATTCTG 58.252 55.000 0.00 0.00 0.00 3.02
318 319 0.329261 TTGTGGAGAGGGCATTCTGG 59.671 55.000 0.00 0.00 0.00 3.86
319 320 0.547471 TGTGGAGAGGGCATTCTGGA 60.547 55.000 0.00 0.00 0.00 3.86
321 322 0.841961 TGGAGAGGGCATTCTGGATG 59.158 55.000 0.00 0.00 38.85 3.51
322 323 1.135094 GGAGAGGGCATTCTGGATGA 58.865 55.000 0.00 0.00 38.03 2.92
323 324 1.704070 GGAGAGGGCATTCTGGATGAT 59.296 52.381 0.00 0.00 38.03 2.45
324 325 2.107901 GGAGAGGGCATTCTGGATGATT 59.892 50.000 0.00 0.00 38.03 2.57
326 327 3.054576 AGAGGGCATTCTGGATGATTCT 58.945 45.455 0.00 0.00 38.03 2.40
327 328 3.147629 GAGGGCATTCTGGATGATTCTG 58.852 50.000 0.00 0.00 38.03 3.02
328 329 2.158505 AGGGCATTCTGGATGATTCTGG 60.159 50.000 0.00 0.00 38.03 3.86
329 330 2.236766 GGCATTCTGGATGATTCTGGG 58.763 52.381 0.00 0.00 38.03 4.45
331 332 2.752154 GCATTCTGGATGATTCTGGGCT 60.752 50.000 0.00 0.00 38.03 5.19
332 333 3.563223 CATTCTGGATGATTCTGGGCTT 58.437 45.455 0.00 0.00 38.03 4.35
334 335 1.213678 TCTGGATGATTCTGGGCTTGG 59.786 52.381 0.00 0.00 0.00 3.61
335 336 0.396139 TGGATGATTCTGGGCTTGGC 60.396 55.000 0.00 0.00 0.00 4.52
351 352 3.810896 GCCCTTTAAGCCGCCGTG 61.811 66.667 0.00 0.00 0.00 4.94
352 353 2.359478 CCCTTTAAGCCGCCGTGT 60.359 61.111 0.00 0.00 0.00 4.49
353 354 1.969589 CCCTTTAAGCCGCCGTGTT 60.970 57.895 0.00 0.00 0.00 3.32
355 356 1.500396 CTTTAAGCCGCCGTGTTCC 59.500 57.895 0.00 0.00 0.00 3.62
357 358 1.231958 TTTAAGCCGCCGTGTTCCAG 61.232 55.000 0.00 0.00 0.00 3.86
364 365 4.680237 CCGTGTTCCAGCTGGCGA 62.680 66.667 28.91 16.06 34.44 5.54
365 366 2.664851 CGTGTTCCAGCTGGCGAA 60.665 61.111 28.91 15.53 34.44 4.70
367 368 2.281484 TGTTCCAGCTGGCGAACC 60.281 61.111 28.91 13.14 38.05 3.62
368 369 3.056328 GTTCCAGCTGGCGAACCC 61.056 66.667 28.91 7.56 33.71 4.11
369 370 3.249189 TTCCAGCTGGCGAACCCT 61.249 61.111 28.91 0.00 33.59 4.34
370 371 1.916273 TTCCAGCTGGCGAACCCTA 60.916 57.895 28.91 4.97 33.59 3.53
371 372 1.485294 TTCCAGCTGGCGAACCCTAA 61.485 55.000 28.91 11.56 33.59 2.69
372 373 1.002624 CCAGCTGGCGAACCCTAAA 60.003 57.895 22.33 0.00 33.59 1.85
373 374 0.394352 CCAGCTGGCGAACCCTAAAT 60.394 55.000 22.33 0.00 33.59 1.40
374 375 1.463674 CAGCTGGCGAACCCTAAATT 58.536 50.000 5.57 0.00 33.59 1.82
375 376 1.818674 CAGCTGGCGAACCCTAAATTT 59.181 47.619 5.57 0.00 33.59 1.82
376 377 2.092323 AGCTGGCGAACCCTAAATTTC 58.908 47.619 0.00 0.00 33.59 2.17
378 379 2.081462 CTGGCGAACCCTAAATTTCGT 58.919 47.619 0.00 0.00 45.12 3.85
380 381 1.131693 GGCGAACCCTAAATTTCGTGG 59.868 52.381 0.00 0.00 45.12 4.94
382 383 2.081462 CGAACCCTAAATTTCGTGGCT 58.919 47.619 0.00 0.00 39.79 4.75
384 385 2.871096 ACCCTAAATTTCGTGGCTCA 57.129 45.000 0.00 0.00 0.00 4.26
386 387 2.304761 ACCCTAAATTTCGTGGCTCAGA 59.695 45.455 0.00 0.00 0.00 3.27
388 389 3.561725 CCCTAAATTTCGTGGCTCAGATC 59.438 47.826 0.00 0.00 0.00 2.75
389 390 3.561725 CCTAAATTTCGTGGCTCAGATCC 59.438 47.826 0.00 0.00 0.00 3.36
390 391 2.787473 AATTTCGTGGCTCAGATCCA 57.213 45.000 0.00 0.00 0.00 3.41
396 397 1.919816 TGGCTCAGATCCACCAGCA 60.920 57.895 0.00 0.00 33.22 4.41
397 398 1.300963 GGCTCAGATCCACCAGCAA 59.699 57.895 5.46 0.00 33.22 3.91
398 399 0.106819 GGCTCAGATCCACCAGCAAT 60.107 55.000 5.46 0.00 33.22 3.56
400 401 1.964552 CTCAGATCCACCAGCAATCC 58.035 55.000 0.00 0.00 0.00 3.01
401 402 1.211212 CTCAGATCCACCAGCAATCCA 59.789 52.381 0.00 0.00 0.00 3.41
403 404 1.064906 CAGATCCACCAGCAATCCACT 60.065 52.381 0.00 0.00 0.00 4.00
404 405 1.211457 AGATCCACCAGCAATCCACTC 59.789 52.381 0.00 0.00 0.00 3.51
406 407 1.133181 TCCACCAGCAATCCACTCCA 61.133 55.000 0.00 0.00 0.00 3.86
408 409 1.619654 CACCAGCAATCCACTCCAAA 58.380 50.000 0.00 0.00 0.00 3.28
410 411 2.564062 CACCAGCAATCCACTCCAAATT 59.436 45.455 0.00 0.00 0.00 1.82
412 413 2.159338 CCAGCAATCCACTCCAAATTCG 60.159 50.000 0.00 0.00 0.00 3.34
415 416 2.159379 GCAATCCACTCCAAATTCGTCC 60.159 50.000 0.00 0.00 0.00 4.79
416 417 3.347216 CAATCCACTCCAAATTCGTCCT 58.653 45.455 0.00 0.00 0.00 3.85
418 419 1.974957 TCCACTCCAAATTCGTCCTCA 59.025 47.619 0.00 0.00 0.00 3.86
419 420 2.370519 TCCACTCCAAATTCGTCCTCAA 59.629 45.455 0.00 0.00 0.00 3.02
420 421 3.146066 CCACTCCAAATTCGTCCTCAAA 58.854 45.455 0.00 0.00 0.00 2.69
421 422 3.758554 CCACTCCAAATTCGTCCTCAAAT 59.241 43.478 0.00 0.00 0.00 2.32
422 423 4.218417 CCACTCCAAATTCGTCCTCAAATT 59.782 41.667 0.00 0.00 0.00 1.82
423 424 5.414454 CCACTCCAAATTCGTCCTCAAATTA 59.586 40.000 0.00 0.00 0.00 1.40
424 425 6.403636 CCACTCCAAATTCGTCCTCAAATTAG 60.404 42.308 0.00 0.00 0.00 1.73
425 426 5.123979 ACTCCAAATTCGTCCTCAAATTAGC 59.876 40.000 0.00 0.00 0.00 3.09
426 427 5.253330 TCCAAATTCGTCCTCAAATTAGCT 58.747 37.500 0.00 0.00 0.00 3.32
427 428 5.710099 TCCAAATTCGTCCTCAAATTAGCTT 59.290 36.000 0.00 0.00 0.00 3.74
428 429 5.801947 CCAAATTCGTCCTCAAATTAGCTTG 59.198 40.000 0.00 0.00 0.00 4.01
429 430 6.381801 CAAATTCGTCCTCAAATTAGCTTGT 58.618 36.000 0.00 0.00 0.00 3.16
431 432 4.002906 TCGTCCTCAAATTAGCTTGTGT 57.997 40.909 0.00 0.00 0.00 3.72
432 433 4.385825 TCGTCCTCAAATTAGCTTGTGTT 58.614 39.130 0.00 0.00 0.00 3.32
433 434 4.819630 TCGTCCTCAAATTAGCTTGTGTTT 59.180 37.500 0.00 0.00 0.00 2.83
434 435 5.992829 TCGTCCTCAAATTAGCTTGTGTTTA 59.007 36.000 0.00 0.00 0.00 2.01
436 437 6.073222 CGTCCTCAAATTAGCTTGTGTTTACT 60.073 38.462 0.00 0.00 0.00 2.24
440 441 5.761234 TCAAATTAGCTTGTGTTTACTCCGT 59.239 36.000 0.00 0.00 0.00 4.69
441 442 6.261381 TCAAATTAGCTTGTGTTTACTCCGTT 59.739 34.615 0.00 0.00 0.00 4.44
442 443 6.628919 AATTAGCTTGTGTTTACTCCGTTT 57.371 33.333 0.00 0.00 0.00 3.60
443 444 6.628919 ATTAGCTTGTGTTTACTCCGTTTT 57.371 33.333 0.00 0.00 0.00 2.43
445 446 4.196971 AGCTTGTGTTTACTCCGTTTTCT 58.803 39.130 0.00 0.00 0.00 2.52
446 447 4.035208 AGCTTGTGTTTACTCCGTTTTCTG 59.965 41.667 0.00 0.00 0.00 3.02
448 449 3.271729 TGTGTTTACTCCGTTTTCTGCA 58.728 40.909 0.00 0.00 0.00 4.41
449 450 3.690139 TGTGTTTACTCCGTTTTCTGCAA 59.310 39.130 0.00 0.00 0.00 4.08
450 451 4.156190 TGTGTTTACTCCGTTTTCTGCAAA 59.844 37.500 0.00 0.00 0.00 3.68
451 452 4.733405 GTGTTTACTCCGTTTTCTGCAAAG 59.267 41.667 0.00 0.00 0.00 2.77
452 453 4.396790 TGTTTACTCCGTTTTCTGCAAAGT 59.603 37.500 0.00 0.00 0.00 2.66
453 454 5.106078 TGTTTACTCCGTTTTCTGCAAAGTT 60.106 36.000 0.00 0.00 0.00 2.66
454 455 3.692791 ACTCCGTTTTCTGCAAAGTTC 57.307 42.857 0.00 0.00 0.00 3.01
455 456 2.031683 ACTCCGTTTTCTGCAAAGTTCG 59.968 45.455 0.00 0.00 0.00 3.95
456 457 2.281517 TCCGTTTTCTGCAAAGTTCGA 58.718 42.857 0.00 0.00 0.00 3.71
457 458 2.031191 TCCGTTTTCTGCAAAGTTCGAC 59.969 45.455 0.00 0.00 0.00 4.20
459 460 3.548014 CCGTTTTCTGCAAAGTTCGACAT 60.548 43.478 0.00 0.00 0.00 3.06
461 462 5.382303 CGTTTTCTGCAAAGTTCGACATAT 58.618 37.500 0.00 0.00 0.00 1.78
462 463 5.504755 CGTTTTCTGCAAAGTTCGACATATC 59.495 40.000 0.00 0.00 0.00 1.63
475 476 3.336468 CGACATATCGTAGCTAGACCCT 58.664 50.000 0.00 0.00 43.66 4.34
476 477 3.125487 CGACATATCGTAGCTAGACCCTG 59.875 52.174 0.00 0.00 43.66 4.45
477 478 4.073549 GACATATCGTAGCTAGACCCTGT 58.926 47.826 0.00 0.00 0.00 4.00
479 480 2.730934 ATCGTAGCTAGACCCTGTCA 57.269 50.000 0.00 0.00 34.60 3.58
481 482 1.025812 CGTAGCTAGACCCTGTCAGG 58.974 60.000 12.40 12.40 34.60 3.86
482 483 0.747852 GTAGCTAGACCCTGTCAGGC 59.252 60.000 13.99 0.55 34.60 4.85
483 484 0.752009 TAGCTAGACCCTGTCAGGCG 60.752 60.000 13.99 9.38 37.37 5.52
484 485 3.082579 GCTAGACCCTGTCAGGCGG 62.083 68.421 13.99 3.40 34.60 6.13
485 486 2.363795 TAGACCCTGTCAGGCGGG 60.364 66.667 13.99 3.56 46.26 6.13
489 490 3.953775 CCCTGTCAGGCGGGTTGT 61.954 66.667 13.99 0.00 42.20 3.32
490 491 2.113139 CCTGTCAGGCGGGTTGTT 59.887 61.111 5.79 0.00 38.84 2.83
491 492 2.260869 CCTGTCAGGCGGGTTGTTG 61.261 63.158 5.79 0.00 38.84 3.33
493 494 2.112297 GTCAGGCGGGTTGTTGGA 59.888 61.111 0.00 0.00 0.00 3.53
494 495 1.966451 GTCAGGCGGGTTGTTGGAG 60.966 63.158 0.00 0.00 0.00 3.86
495 496 2.144078 TCAGGCGGGTTGTTGGAGA 61.144 57.895 0.00 0.00 0.00 3.71
496 497 1.002134 CAGGCGGGTTGTTGGAGAT 60.002 57.895 0.00 0.00 0.00 2.75
497 498 1.002134 AGGCGGGTTGTTGGAGATG 60.002 57.895 0.00 0.00 0.00 2.90
499 500 1.675641 GCGGGTTGTTGGAGATGCT 60.676 57.895 0.00 0.00 0.00 3.79
500 501 1.648467 GCGGGTTGTTGGAGATGCTC 61.648 60.000 0.00 0.00 0.00 4.26
501 502 0.036010 CGGGTTGTTGGAGATGCTCT 60.036 55.000 0.00 0.00 0.00 4.09
502 503 1.611673 CGGGTTGTTGGAGATGCTCTT 60.612 52.381 0.00 0.00 0.00 2.85
503 504 2.354704 CGGGTTGTTGGAGATGCTCTTA 60.355 50.000 0.00 0.00 0.00 2.10
505 506 3.274288 GGTTGTTGGAGATGCTCTTAGG 58.726 50.000 0.00 0.00 0.00 2.69
508 509 3.445008 TGTTGGAGATGCTCTTAGGACT 58.555 45.455 0.00 0.00 0.00 3.85
509 510 3.840666 TGTTGGAGATGCTCTTAGGACTT 59.159 43.478 0.00 0.00 0.00 3.01
510 511 4.187694 GTTGGAGATGCTCTTAGGACTTG 58.812 47.826 0.00 0.00 0.00 3.16
511 512 3.445008 TGGAGATGCTCTTAGGACTTGT 58.555 45.455 0.00 0.00 0.00 3.16
512 513 3.449018 TGGAGATGCTCTTAGGACTTGTC 59.551 47.826 0.00 0.00 0.00 3.18
513 514 3.181470 GGAGATGCTCTTAGGACTTGTCC 60.181 52.174 11.59 11.59 0.00 4.02
514 515 3.445008 AGATGCTCTTAGGACTTGTCCA 58.555 45.455 20.36 5.41 0.00 4.02
517 518 2.303022 TGCTCTTAGGACTTGTCCAAGG 59.697 50.000 20.36 14.61 42.53 3.61
518 519 2.355209 GCTCTTAGGACTTGTCCAAGGG 60.355 54.545 20.36 19.38 42.53 3.95
519 520 3.173965 CTCTTAGGACTTGTCCAAGGGA 58.826 50.000 20.36 11.72 42.53 4.20
520 521 3.583086 CTCTTAGGACTTGTCCAAGGGAA 59.417 47.826 20.36 6.72 42.53 3.97
521 522 3.977999 TCTTAGGACTTGTCCAAGGGAAA 59.022 43.478 20.36 5.44 42.53 3.13
523 524 3.903530 AGGACTTGTCCAAGGGAAAAT 57.096 42.857 20.36 0.00 42.53 1.82
524 525 3.767711 AGGACTTGTCCAAGGGAAAATC 58.232 45.455 20.36 0.00 42.53 2.17
525 526 2.826128 GGACTTGTCCAAGGGAAAATCC 59.174 50.000 14.34 4.57 42.53 3.01
526 527 3.500471 GGACTTGTCCAAGGGAAAATCCT 60.500 47.826 14.34 0.00 42.53 3.24
527 528 3.759086 GACTTGTCCAAGGGAAAATCCTC 59.241 47.826 11.45 0.00 42.53 3.71
528 529 3.399305 ACTTGTCCAAGGGAAAATCCTCT 59.601 43.478 11.45 0.00 42.53 3.69
529 530 4.140924 ACTTGTCCAAGGGAAAATCCTCTT 60.141 41.667 11.45 0.00 42.53 2.85
530 531 3.766545 TGTCCAAGGGAAAATCCTCTTG 58.233 45.455 15.17 15.17 40.94 3.02
531 532 3.140144 TGTCCAAGGGAAAATCCTCTTGT 59.860 43.478 18.18 0.00 40.30 3.16
532 533 4.352595 TGTCCAAGGGAAAATCCTCTTGTA 59.647 41.667 18.18 7.40 40.30 2.41
534 535 4.601857 TCCAAGGGAAAATCCTCTTGTACT 59.398 41.667 18.18 0.00 40.30 2.73
536 537 3.956744 AGGGAAAATCCTCTTGTACTGC 58.043 45.455 0.00 0.00 36.57 4.40
537 538 3.589288 AGGGAAAATCCTCTTGTACTGCT 59.411 43.478 0.00 0.00 36.57 4.24
538 539 4.043435 AGGGAAAATCCTCTTGTACTGCTT 59.957 41.667 0.00 0.00 36.57 3.91
540 541 5.243954 GGGAAAATCCTCTTGTACTGCTTTT 59.756 40.000 0.00 0.00 36.57 2.27
546 547 6.614694 TCCTCTTGTACTGCTTTTACCATA 57.385 37.500 0.00 0.00 0.00 2.74
547 548 7.195374 TCCTCTTGTACTGCTTTTACCATAT 57.805 36.000 0.00 0.00 0.00 1.78
548 549 7.630082 TCCTCTTGTACTGCTTTTACCATATT 58.370 34.615 0.00 0.00 0.00 1.28
549 550 8.764558 TCCTCTTGTACTGCTTTTACCATATTA 58.235 33.333 0.00 0.00 0.00 0.98
550 551 9.561069 CCTCTTGTACTGCTTTTACCATATTAT 57.439 33.333 0.00 0.00 0.00 1.28
573 574 9.837681 TTATACATGGATCTATCAGTTTCCCTA 57.162 33.333 0.00 0.00 0.00 3.53
575 576 7.639062 ACATGGATCTATCAGTTTCCCTAAT 57.361 36.000 0.00 0.00 0.00 1.73
578 579 6.150332 TGGATCTATCAGTTTCCCTAATCCA 58.850 40.000 0.00 0.00 38.19 3.41
580 581 6.271159 GGATCTATCAGTTTCCCTAATCCAGT 59.729 42.308 0.00 0.00 32.29 4.00
581 582 7.455008 GGATCTATCAGTTTCCCTAATCCAGTA 59.545 40.741 0.00 0.00 32.29 2.74
582 583 8.798975 ATCTATCAGTTTCCCTAATCCAGTAA 57.201 34.615 0.00 0.00 0.00 2.24
583 584 8.251383 TCTATCAGTTTCCCTAATCCAGTAAG 57.749 38.462 0.00 0.00 0.00 2.34
585 586 6.697641 TCAGTTTCCCTAATCCAGTAAGTT 57.302 37.500 0.00 0.00 0.00 2.66
586 587 7.086685 TCAGTTTCCCTAATCCAGTAAGTTT 57.913 36.000 0.00 0.00 0.00 2.66
587 588 7.166167 TCAGTTTCCCTAATCCAGTAAGTTTC 58.834 38.462 0.00 0.00 0.00 2.78
589 590 6.045106 AGTTTCCCTAATCCAGTAAGTTTCCA 59.955 38.462 0.00 0.00 0.00 3.53
590 591 6.652205 TTCCCTAATCCAGTAAGTTTCCAT 57.348 37.500 0.00 0.00 0.00 3.41
592 593 5.970640 TCCCTAATCCAGTAAGTTTCCATCT 59.029 40.000 0.00 0.00 0.00 2.90
594 595 7.626084 TCCCTAATCCAGTAAGTTTCCATCTAA 59.374 37.037 0.00 0.00 0.00 2.10
595 596 7.715686 CCCTAATCCAGTAAGTTTCCATCTAAC 59.284 40.741 0.00 0.00 0.00 2.34
596 597 8.265055 CCTAATCCAGTAAGTTTCCATCTAACA 58.735 37.037 0.00 0.00 0.00 2.41
598 599 6.681729 TCCAGTAAGTTTCCATCTAACAGT 57.318 37.500 0.00 0.00 0.00 3.55
599 600 6.464222 TCCAGTAAGTTTCCATCTAACAGTG 58.536 40.000 0.00 0.00 0.00 3.66
600 601 6.042781 TCCAGTAAGTTTCCATCTAACAGTGT 59.957 38.462 0.00 0.00 0.00 3.55
601 602 6.369065 CCAGTAAGTTTCCATCTAACAGTGTC 59.631 42.308 0.00 0.00 0.00 3.67
602 603 6.929049 CAGTAAGTTTCCATCTAACAGTGTCA 59.071 38.462 0.00 0.00 0.00 3.58
603 604 7.604164 CAGTAAGTTTCCATCTAACAGTGTCAT 59.396 37.037 0.00 0.00 0.00 3.06
604 605 8.157476 AGTAAGTTTCCATCTAACAGTGTCATT 58.843 33.333 0.00 0.00 0.00 2.57
605 606 7.823745 AAGTTTCCATCTAACAGTGTCATTT 57.176 32.000 0.00 0.00 0.00 2.32
606 607 7.823745 AGTTTCCATCTAACAGTGTCATTTT 57.176 32.000 0.00 0.00 0.00 1.82
607 608 7.875971 AGTTTCCATCTAACAGTGTCATTTTC 58.124 34.615 0.00 0.00 0.00 2.29
609 610 8.299570 GTTTCCATCTAACAGTGTCATTTTCAT 58.700 33.333 0.00 0.00 0.00 2.57
610 611 7.615582 TCCATCTAACAGTGTCATTTTCATC 57.384 36.000 0.00 0.00 0.00 2.92
613 614 7.120285 CCATCTAACAGTGTCATTTTCATCAGT 59.880 37.037 0.00 0.00 0.00 3.41
614 615 7.658179 TCTAACAGTGTCATTTTCATCAGTC 57.342 36.000 0.00 0.00 0.00 3.51
615 616 7.216494 TCTAACAGTGTCATTTTCATCAGTCA 58.784 34.615 0.00 0.00 0.00 3.41
616 617 6.889301 AACAGTGTCATTTTCATCAGTCAT 57.111 33.333 0.00 0.00 0.00 3.06
617 618 6.492007 ACAGTGTCATTTTCATCAGTCATC 57.508 37.500 0.00 0.00 0.00 2.92
618 619 6.236409 ACAGTGTCATTTTCATCAGTCATCT 58.764 36.000 0.00 0.00 0.00 2.90
619 620 6.370994 ACAGTGTCATTTTCATCAGTCATCTC 59.629 38.462 0.00 0.00 0.00 2.75
620 621 5.579904 AGTGTCATTTTCATCAGTCATCTCG 59.420 40.000 0.00 0.00 0.00 4.04
621 622 5.578336 GTGTCATTTTCATCAGTCATCTCGA 59.422 40.000 0.00 0.00 0.00 4.04
636 637 7.295952 GTCATCTCGACATCTTTACAAACAT 57.704 36.000 0.00 0.00 44.69 2.71
637 638 7.743104 GTCATCTCGACATCTTTACAAACATT 58.257 34.615 0.00 0.00 44.69 2.71
638 639 7.689812 GTCATCTCGACATCTTTACAAACATTG 59.310 37.037 0.00 0.00 44.69 2.82
641 642 6.481976 TCTCGACATCTTTACAAACATTGTGT 59.518 34.615 6.01 0.00 45.03 3.72
642 643 7.654116 TCTCGACATCTTTACAAACATTGTGTA 59.346 33.333 6.01 0.00 45.03 2.90
644 645 8.613482 TCGACATCTTTACAAACATTGTGTAAA 58.387 29.630 6.01 10.45 44.92 2.01
652 653 4.201970 ACAAACATTGTGTAAAGTGACCCG 60.202 41.667 0.00 0.00 43.48 5.28
653 654 3.478857 ACATTGTGTAAAGTGACCCGA 57.521 42.857 0.00 0.00 0.00 5.14
654 655 3.811083 ACATTGTGTAAAGTGACCCGAA 58.189 40.909 0.00 0.00 0.00 4.30
657 658 5.125739 ACATTGTGTAAAGTGACCCGAAAAA 59.874 36.000 0.00 0.00 0.00 1.94
696 4920 2.230660 GACCCAACTCTCCAACAAAGG 58.769 52.381 0.00 0.00 0.00 3.11
762 4996 9.474920 CAATCTTATCACTATCACTTTCTCCTC 57.525 37.037 0.00 0.00 0.00 3.71
763 4997 7.589958 TCTTATCACTATCACTTTCTCCTCC 57.410 40.000 0.00 0.00 0.00 4.30
764 4998 7.358263 TCTTATCACTATCACTTTCTCCTCCT 58.642 38.462 0.00 0.00 0.00 3.69
765 4999 5.867903 ATCACTATCACTTTCTCCTCCTG 57.132 43.478 0.00 0.00 0.00 3.86
806 5052 1.342874 CCCAGGGTATTTTGGCCATCA 60.343 52.381 6.09 0.00 32.98 3.07
885 5133 4.436998 CACCACCGTCTCCTCGCC 62.437 72.222 0.00 0.00 0.00 5.54
1005 5316 0.179056 CCCCGTCGTTAGCAATGGAT 60.179 55.000 0.00 0.00 0.00 3.41
1200 5517 4.488136 TACCTCGCCGCCGTCCTA 62.488 66.667 0.00 0.00 35.54 2.94
1482 5815 3.627577 CCAAGGCTTAGAAACACGCATAT 59.372 43.478 0.00 0.00 0.00 1.78
1507 5841 3.440173 TGCTGTAGGCTGTTTAATGCTTC 59.560 43.478 0.00 0.00 42.39 3.86
1513 5847 4.324267 AGGCTGTTTAATGCTTCGTAACT 58.676 39.130 0.00 0.00 0.00 2.24
1609 5953 3.181506 GCCTAAATTCTTTGCTCTGTCGG 60.182 47.826 0.00 0.00 0.00 4.79
1629 5973 2.024414 GCTGTTCTTGTTTCCCAGTGT 58.976 47.619 0.00 0.00 0.00 3.55
1636 5980 3.813166 TCTTGTTTCCCAGTGTTCGATTC 59.187 43.478 0.00 0.00 0.00 2.52
1681 6025 2.418910 CCAGGTGCTCGATCTCCGT 61.419 63.158 1.99 0.00 39.75 4.69
1719 6073 2.095461 GAGATGGAAGGGAAGTTTGCC 58.905 52.381 0.00 0.00 39.23 4.52
1734 6088 3.264897 GCCCGATAGCACTGCGTG 61.265 66.667 4.61 4.61 36.51 5.34
1799 6153 2.027007 CCTACAAATCCCCACACGGTAA 60.027 50.000 0.00 0.00 0.00 2.85
1893 6265 1.047801 TCTGTGCACCTGACTTGCTA 58.952 50.000 15.69 0.00 40.86 3.49
1916 6288 1.129998 CGGAATGCTTGACAAGAGCTG 59.870 52.381 19.51 5.59 40.75 4.24
1954 6326 2.669569 TTGGCCGCTGTCAGCTTC 60.670 61.111 22.13 12.94 39.60 3.86
1964 6336 2.927856 TCAGCTTCTCGGCCCCAA 60.928 61.111 0.00 0.00 0.00 4.12
1967 6339 2.044946 GCTTCTCGGCCCCAACAT 60.045 61.111 0.00 0.00 0.00 2.71
1990 6362 1.330655 TGCTAGAGTGCTACAGGCCC 61.331 60.000 0.00 0.00 40.92 5.80
2007 6379 2.560861 CGGGCAACATGTTCGTGG 59.439 61.111 8.48 0.00 39.74 4.94
2112 6520 4.165372 AGTTTTTCCAGAGTAGTTGTCCCA 59.835 41.667 0.00 0.00 0.00 4.37
2113 6521 4.993705 TTTTCCAGAGTAGTTGTCCCAT 57.006 40.909 0.00 0.00 0.00 4.00
2114 6522 3.981071 TTCCAGAGTAGTTGTCCCATG 57.019 47.619 0.00 0.00 0.00 3.66
2116 6524 1.278985 CCAGAGTAGTTGTCCCATGCA 59.721 52.381 0.00 0.00 0.00 3.96
2117 6525 2.625737 CAGAGTAGTTGTCCCATGCAG 58.374 52.381 0.00 0.00 0.00 4.41
2160 6571 0.747255 TCGCCCAGTTGCTCTATCTC 59.253 55.000 0.00 0.00 0.00 2.75
2237 6658 6.266323 TGCAGCGAACATACAAAAACTAAAA 58.734 32.000 0.00 0.00 0.00 1.52
2315 6786 4.383770 CGTTAATCCTAATGGTGTGGGTCT 60.384 45.833 0.00 0.00 34.23 3.85
2360 6831 7.148869 GGAAATAAAAGCAACGAAAAATAGCGT 60.149 33.333 0.00 0.00 43.39 5.07
2381 6852 1.813513 CTCTGCCGTGATTCAAACCT 58.186 50.000 0.00 0.00 0.00 3.50
2382 6853 1.734465 CTCTGCCGTGATTCAAACCTC 59.266 52.381 0.00 0.00 0.00 3.85
2383 6854 0.443869 CTGCCGTGATTCAAACCTCG 59.556 55.000 0.00 0.00 0.00 4.63
2389 7479 2.489971 GTGATTCAAACCTCGGACACA 58.510 47.619 0.00 0.00 0.00 3.72
2427 7517 2.960819 GCTTGACGACTGTACCATTCT 58.039 47.619 0.00 0.00 0.00 2.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.264288 CCGTTGAAAGCAGTCTTGTCC 59.736 52.381 0.00 0.00 31.78 4.02
1 2 1.264288 CCCGTTGAAAGCAGTCTTGTC 59.736 52.381 0.00 0.00 31.78 3.18
2 3 1.308998 CCCGTTGAAAGCAGTCTTGT 58.691 50.000 0.00 0.00 31.78 3.16
4 5 0.537371 CCCCCGTTGAAAGCAGTCTT 60.537 55.000 0.00 0.00 0.00 3.01
5 6 1.073199 CCCCCGTTGAAAGCAGTCT 59.927 57.895 0.00 0.00 0.00 3.24
20 21 0.991920 TCTGTCCTGACAATTCCCCC 59.008 55.000 1.14 0.00 41.33 5.40
21 22 1.630878 ACTCTGTCCTGACAATTCCCC 59.369 52.381 1.14 0.00 41.33 4.81
22 23 3.425162 AACTCTGTCCTGACAATTCCC 57.575 47.619 1.14 0.00 41.33 3.97
23 24 4.894784 TGTAACTCTGTCCTGACAATTCC 58.105 43.478 1.14 0.00 41.33 3.01
24 25 4.932200 CCTGTAACTCTGTCCTGACAATTC 59.068 45.833 1.14 0.00 41.33 2.17
25 26 4.348168 ACCTGTAACTCTGTCCTGACAATT 59.652 41.667 1.14 0.00 41.33 2.32
28 29 2.628178 CACCTGTAACTCTGTCCTGACA 59.372 50.000 0.00 0.00 39.32 3.58
29 30 2.891580 TCACCTGTAACTCTGTCCTGAC 59.108 50.000 0.00 0.00 0.00 3.51
30 31 2.891580 GTCACCTGTAACTCTGTCCTGA 59.108 50.000 0.00 0.00 0.00 3.86
31 32 2.628178 TGTCACCTGTAACTCTGTCCTG 59.372 50.000 0.00 0.00 0.00 3.86
32 33 2.958818 TGTCACCTGTAACTCTGTCCT 58.041 47.619 0.00 0.00 0.00 3.85
35 36 4.081087 ACTGTTTGTCACCTGTAACTCTGT 60.081 41.667 0.00 0.00 0.00 3.41
37 38 4.755266 ACTGTTTGTCACCTGTAACTCT 57.245 40.909 0.00 0.00 0.00 3.24
38 39 6.278363 TCTAACTGTTTGTCACCTGTAACTC 58.722 40.000 0.00 0.00 0.00 3.01
40 41 6.511282 GCTTCTAACTGTTTGTCACCTGTAAC 60.511 42.308 0.00 0.00 0.00 2.50
41 42 5.526111 GCTTCTAACTGTTTGTCACCTGTAA 59.474 40.000 0.00 0.00 0.00 2.41
42 43 5.054477 GCTTCTAACTGTTTGTCACCTGTA 58.946 41.667 0.00 0.00 0.00 2.74
43 44 3.877508 GCTTCTAACTGTTTGTCACCTGT 59.122 43.478 0.00 0.00 0.00 4.00
45 46 3.136626 AGGCTTCTAACTGTTTGTCACCT 59.863 43.478 0.00 2.94 0.00 4.00
46 47 3.477530 AGGCTTCTAACTGTTTGTCACC 58.522 45.455 0.00 0.69 0.00 4.02
49 50 6.803154 ATTGTAGGCTTCTAACTGTTTGTC 57.197 37.500 0.00 0.00 0.00 3.18
50 51 6.653740 GGTATTGTAGGCTTCTAACTGTTTGT 59.346 38.462 0.00 0.00 0.00 2.83
51 52 6.183360 CGGTATTGTAGGCTTCTAACTGTTTG 60.183 42.308 0.00 0.00 0.00 2.93
52 53 5.873164 CGGTATTGTAGGCTTCTAACTGTTT 59.127 40.000 0.00 0.00 0.00 2.83
53 54 5.046807 ACGGTATTGTAGGCTTCTAACTGTT 60.047 40.000 0.00 0.00 0.00 3.16
54 55 4.465305 ACGGTATTGTAGGCTTCTAACTGT 59.535 41.667 0.00 0.00 0.00 3.55
55 56 5.007385 ACGGTATTGTAGGCTTCTAACTG 57.993 43.478 0.00 0.00 0.00 3.16
56 57 5.672421 AACGGTATTGTAGGCTTCTAACT 57.328 39.130 0.00 0.00 0.00 2.24
57 58 5.870978 TGAAACGGTATTGTAGGCTTCTAAC 59.129 40.000 0.00 0.00 0.00 2.34
58 59 6.040209 TGAAACGGTATTGTAGGCTTCTAA 57.960 37.500 0.00 0.00 0.00 2.10
59 60 5.664294 TGAAACGGTATTGTAGGCTTCTA 57.336 39.130 0.00 0.00 0.00 2.10
60 61 4.546829 TGAAACGGTATTGTAGGCTTCT 57.453 40.909 0.00 0.00 0.00 2.85
62 63 5.475564 ACAAATGAAACGGTATTGTAGGCTT 59.524 36.000 0.00 0.00 32.81 4.35
63 64 5.007682 ACAAATGAAACGGTATTGTAGGCT 58.992 37.500 0.00 0.00 32.81 4.58
64 65 5.305139 ACAAATGAAACGGTATTGTAGGC 57.695 39.130 0.00 0.00 32.81 3.93
67 68 6.711194 TCTTGGACAAATGAAACGGTATTGTA 59.289 34.615 0.00 0.00 34.59 2.41
68 69 5.533154 TCTTGGACAAATGAAACGGTATTGT 59.467 36.000 0.00 0.00 36.96 2.71
71 72 4.156008 GCTCTTGGACAAATGAAACGGTAT 59.844 41.667 0.00 0.00 0.00 2.73
72 73 3.500680 GCTCTTGGACAAATGAAACGGTA 59.499 43.478 0.00 0.00 0.00 4.02
73 74 2.293399 GCTCTTGGACAAATGAAACGGT 59.707 45.455 0.00 0.00 0.00 4.83
74 75 2.293122 TGCTCTTGGACAAATGAAACGG 59.707 45.455 0.00 0.00 0.00 4.44
76 77 5.098211 GCTATGCTCTTGGACAAATGAAAC 58.902 41.667 0.00 0.00 0.00 2.78
77 78 4.766373 TGCTATGCTCTTGGACAAATGAAA 59.234 37.500 0.00 0.00 0.00 2.69
79 80 3.943381 CTGCTATGCTCTTGGACAAATGA 59.057 43.478 0.00 0.00 0.00 2.57
81 82 2.686915 GCTGCTATGCTCTTGGACAAAT 59.313 45.455 0.00 0.00 0.00 2.32
82 83 2.086869 GCTGCTATGCTCTTGGACAAA 58.913 47.619 0.00 0.00 0.00 2.83
83 84 1.679944 GGCTGCTATGCTCTTGGACAA 60.680 52.381 0.00 0.00 0.00 3.18
84 85 0.107508 GGCTGCTATGCTCTTGGACA 60.108 55.000 0.00 0.00 0.00 4.02
85 86 1.156645 CGGCTGCTATGCTCTTGGAC 61.157 60.000 0.00 0.00 0.00 4.02
86 87 1.144716 CGGCTGCTATGCTCTTGGA 59.855 57.895 0.00 0.00 0.00 3.53
87 88 1.153289 ACGGCTGCTATGCTCTTGG 60.153 57.895 0.00 0.00 0.00 3.61
88 89 1.485838 CGACGGCTGCTATGCTCTTG 61.486 60.000 0.00 0.00 0.00 3.02
89 90 1.227089 CGACGGCTGCTATGCTCTT 60.227 57.895 0.00 0.00 0.00 2.85
91 92 0.598680 AATCGACGGCTGCTATGCTC 60.599 55.000 0.00 0.00 0.00 4.26
93 94 0.875908 TGAATCGACGGCTGCTATGC 60.876 55.000 0.00 0.00 0.00 3.14
94 95 0.855349 GTGAATCGACGGCTGCTATG 59.145 55.000 0.00 0.00 0.00 2.23
96 97 1.226575 CGTGAATCGACGGCTGCTA 60.227 57.895 0.00 0.00 42.86 3.49
97 98 2.507102 CGTGAATCGACGGCTGCT 60.507 61.111 0.00 0.00 42.86 4.24
98 99 2.506217 TCGTGAATCGACGGCTGC 60.506 61.111 0.00 0.00 44.01 5.25
118 119 0.108992 TAAGTTCACTGGCGCCGTAG 60.109 55.000 23.90 17.51 0.00 3.51
119 120 0.388907 GTAAGTTCACTGGCGCCGTA 60.389 55.000 23.90 3.59 0.00 4.02
122 123 2.388232 CGGTAAGTTCACTGGCGCC 61.388 63.158 22.73 22.73 0.00 6.53
125 126 0.796927 GAAGCGGTAAGTTCACTGGC 59.203 55.000 0.00 0.00 0.00 4.85
142 143 1.000607 AGTGAGTCACTTTAGCGCGAA 60.001 47.619 20.34 0.00 42.59 4.70
143 144 0.596577 AGTGAGTCACTTTAGCGCGA 59.403 50.000 20.34 0.00 42.59 5.87
144 145 0.985549 GAGTGAGTCACTTTAGCGCG 59.014 55.000 26.14 0.00 45.44 6.86
145 146 1.351153 GGAGTGAGTCACTTTAGCGC 58.649 55.000 26.14 12.40 45.44 5.92
146 147 1.272490 TGGGAGTGAGTCACTTTAGCG 59.728 52.381 26.14 0.00 45.44 4.26
147 148 2.933056 GCTGGGAGTGAGTCACTTTAGC 60.933 54.545 26.14 26.63 45.44 3.09
148 149 2.354203 GGCTGGGAGTGAGTCACTTTAG 60.354 54.545 26.14 22.27 45.44 1.85
149 150 1.623811 GGCTGGGAGTGAGTCACTTTA 59.376 52.381 26.14 14.38 45.44 1.85
153 154 2.100879 AACGGCTGGGAGTGAGTCAC 62.101 60.000 15.78 15.78 34.10 3.67
154 155 1.837051 AACGGCTGGGAGTGAGTCA 60.837 57.895 0.00 0.00 0.00 3.41
155 156 1.374758 CAACGGCTGGGAGTGAGTC 60.375 63.158 0.00 0.00 0.00 3.36
156 157 1.194781 ATCAACGGCTGGGAGTGAGT 61.195 55.000 0.00 0.00 0.00 3.41
158 159 0.904865 AGATCAACGGCTGGGAGTGA 60.905 55.000 0.00 0.00 0.00 3.41
159 160 0.460987 GAGATCAACGGCTGGGAGTG 60.461 60.000 0.00 0.00 0.00 3.51
160 161 0.904865 TGAGATCAACGGCTGGGAGT 60.905 55.000 0.00 0.00 0.00 3.85
165 166 2.350804 CACATCTTGAGATCAACGGCTG 59.649 50.000 0.00 0.00 31.21 4.85
166 167 2.625737 CACATCTTGAGATCAACGGCT 58.374 47.619 0.00 0.00 31.21 5.52
170 171 1.063174 GCCGCACATCTTGAGATCAAC 59.937 52.381 0.00 0.00 31.21 3.18
171 172 1.065926 AGCCGCACATCTTGAGATCAA 60.066 47.619 0.00 0.00 31.21 2.57
172 173 0.538584 AGCCGCACATCTTGAGATCA 59.461 50.000 0.00 0.00 31.21 2.92
173 174 1.216122 GAGCCGCACATCTTGAGATC 58.784 55.000 0.00 0.00 31.21 2.75
174 175 0.538584 TGAGCCGCACATCTTGAGAT 59.461 50.000 0.00 0.00 34.56 2.75
175 176 0.538584 ATGAGCCGCACATCTTGAGA 59.461 50.000 0.00 0.00 0.00 3.27
177 178 1.371337 GCATGAGCCGCACATCTTGA 61.371 55.000 0.00 0.00 33.58 3.02
198 199 7.637519 GGTAAAGTTCAAAAGAGACGTTACAAC 59.362 37.037 11.52 0.00 0.00 3.32
199 200 7.201635 GGGTAAAGTTCAAAAGAGACGTTACAA 60.202 37.037 11.52 0.00 0.00 2.41
202 203 5.759763 GGGGTAAAGTTCAAAAGAGACGTTA 59.240 40.000 0.00 0.00 0.00 3.18
204 205 4.132336 GGGGTAAAGTTCAAAAGAGACGT 58.868 43.478 0.00 0.00 0.00 4.34
205 206 4.131596 TGGGGTAAAGTTCAAAAGAGACG 58.868 43.478 0.00 0.00 0.00 4.18
206 207 5.374071 TCTGGGGTAAAGTTCAAAAGAGAC 58.626 41.667 0.00 0.00 0.00 3.36
207 208 5.621193 CTCTGGGGTAAAGTTCAAAAGAGA 58.379 41.667 0.00 0.00 32.24 3.10
208 209 4.216472 GCTCTGGGGTAAAGTTCAAAAGAG 59.784 45.833 0.00 0.00 33.41 2.85
209 210 4.141251 AGCTCTGGGGTAAAGTTCAAAAGA 60.141 41.667 0.00 0.00 0.00 2.52
210 211 4.145052 AGCTCTGGGGTAAAGTTCAAAAG 58.855 43.478 0.00 0.00 0.00 2.27
211 212 4.178956 AGCTCTGGGGTAAAGTTCAAAA 57.821 40.909 0.00 0.00 0.00 2.44
212 213 3.876309 AGCTCTGGGGTAAAGTTCAAA 57.124 42.857 0.00 0.00 0.00 2.69
213 214 4.288626 ACATAGCTCTGGGGTAAAGTTCAA 59.711 41.667 3.94 0.00 0.00 2.69
214 215 3.844211 ACATAGCTCTGGGGTAAAGTTCA 59.156 43.478 3.94 0.00 0.00 3.18
215 216 4.489306 ACATAGCTCTGGGGTAAAGTTC 57.511 45.455 3.94 0.00 0.00 3.01
216 217 5.487845 AGTTACATAGCTCTGGGGTAAAGTT 59.512 40.000 3.94 0.00 0.00 2.66
217 218 5.030820 AGTTACATAGCTCTGGGGTAAAGT 58.969 41.667 3.94 0.00 0.00 2.66
218 219 5.128827 TCAGTTACATAGCTCTGGGGTAAAG 59.871 44.000 3.94 0.00 0.00 1.85
219 220 5.027460 TCAGTTACATAGCTCTGGGGTAAA 58.973 41.667 3.94 0.00 0.00 2.01
220 221 4.616553 TCAGTTACATAGCTCTGGGGTAA 58.383 43.478 3.94 0.00 0.00 2.85
221 222 4.259933 TCAGTTACATAGCTCTGGGGTA 57.740 45.455 3.94 0.00 0.00 3.69
222 223 3.116096 TCAGTTACATAGCTCTGGGGT 57.884 47.619 3.94 0.00 0.00 4.95
223 224 3.432326 GGTTCAGTTACATAGCTCTGGGG 60.432 52.174 3.94 0.00 0.00 4.96
224 225 3.452627 AGGTTCAGTTACATAGCTCTGGG 59.547 47.826 3.94 0.00 0.00 4.45
226 227 5.078411 ACAGGTTCAGTTACATAGCTCTG 57.922 43.478 0.00 0.00 0.00 3.35
227 228 4.142359 CGACAGGTTCAGTTACATAGCTCT 60.142 45.833 0.00 0.00 0.00 4.09
228 229 4.106197 CGACAGGTTCAGTTACATAGCTC 58.894 47.826 0.00 0.00 0.00 4.09
230 231 2.603560 GCGACAGGTTCAGTTACATAGC 59.396 50.000 0.00 0.00 0.00 2.97
231 232 4.111375 AGCGACAGGTTCAGTTACATAG 57.889 45.455 0.00 0.00 0.00 2.23
232 233 5.593095 AGATAGCGACAGGTTCAGTTACATA 59.407 40.000 0.00 0.00 0.00 2.29
233 234 4.402793 AGATAGCGACAGGTTCAGTTACAT 59.597 41.667 0.00 0.00 0.00 2.29
234 235 3.762288 AGATAGCGACAGGTTCAGTTACA 59.238 43.478 0.00 0.00 0.00 2.41
235 236 4.373348 AGATAGCGACAGGTTCAGTTAC 57.627 45.455 0.00 0.00 0.00 2.50
236 237 4.744570 CAAGATAGCGACAGGTTCAGTTA 58.255 43.478 0.00 0.00 0.00 2.24
237 238 3.589988 CAAGATAGCGACAGGTTCAGTT 58.410 45.455 0.00 0.00 0.00 3.16
239 240 1.929836 GCAAGATAGCGACAGGTTCAG 59.070 52.381 0.00 0.00 0.00 3.02
240 241 1.550524 AGCAAGATAGCGACAGGTTCA 59.449 47.619 0.00 0.00 40.15 3.18
242 243 2.770164 AAGCAAGATAGCGACAGGTT 57.230 45.000 0.00 0.00 40.15 3.50
243 244 2.770164 AAAGCAAGATAGCGACAGGT 57.230 45.000 0.00 0.00 40.15 4.00
244 245 3.002791 TGAAAAGCAAGATAGCGACAGG 58.997 45.455 0.00 0.00 40.15 4.00
246 247 2.742053 GGTGAAAAGCAAGATAGCGACA 59.258 45.455 0.00 0.00 40.15 4.35
248 249 3.002791 CAGGTGAAAAGCAAGATAGCGA 58.997 45.455 0.00 0.00 40.15 4.93
251 252 3.063180 CGAGCAGGTGAAAAGCAAGATAG 59.937 47.826 0.00 0.00 0.00 2.08
252 253 3.002791 CGAGCAGGTGAAAAGCAAGATA 58.997 45.455 0.00 0.00 0.00 1.98
253 254 1.808945 CGAGCAGGTGAAAAGCAAGAT 59.191 47.619 0.00 0.00 0.00 2.40
254 255 1.202639 TCGAGCAGGTGAAAAGCAAGA 60.203 47.619 0.00 0.00 0.00 3.02
256 257 0.944386 GTCGAGCAGGTGAAAAGCAA 59.056 50.000 0.00 0.00 0.00 3.91
257 258 0.884704 GGTCGAGCAGGTGAAAAGCA 60.885 55.000 10.30 0.00 0.00 3.91
259 260 0.955919 GGGGTCGAGCAGGTGAAAAG 60.956 60.000 17.59 0.00 0.00 2.27
260 261 1.072505 GGGGTCGAGCAGGTGAAAA 59.927 57.895 17.59 0.00 0.00 2.29
262 263 1.415672 AAAGGGGTCGAGCAGGTGAA 61.416 55.000 17.59 0.00 0.00 3.18
263 264 1.415672 AAAAGGGGTCGAGCAGGTGA 61.416 55.000 17.59 0.00 0.00 4.02
265 266 1.061546 TAAAAAGGGGTCGAGCAGGT 58.938 50.000 17.59 0.00 0.00 4.00
266 267 2.084546 CTTAAAAAGGGGTCGAGCAGG 58.915 52.381 17.59 0.00 0.00 4.85
268 269 1.073284 AGCTTAAAAAGGGGTCGAGCA 59.927 47.619 17.59 0.00 0.00 4.26
269 270 1.738350 GAGCTTAAAAAGGGGTCGAGC 59.262 52.381 5.93 5.93 0.00 5.03
271 272 2.027469 GGAGAGCTTAAAAAGGGGTCGA 60.027 50.000 0.00 0.00 33.42 4.20
272 273 2.027100 AGGAGAGCTTAAAAAGGGGTCG 60.027 50.000 0.00 0.00 33.42 4.79
275 276 2.681097 CGGAGGAGAGCTTAAAAAGGGG 60.681 54.545 0.00 0.00 0.00 4.79
276 277 2.633488 CGGAGGAGAGCTTAAAAAGGG 58.367 52.381 0.00 0.00 0.00 3.95
293 294 3.003173 CCCTCTCCACAAGCCGGA 61.003 66.667 5.05 0.00 0.00 5.14
295 296 2.826777 AATGCCCTCTCCACAAGCCG 62.827 60.000 0.00 0.00 0.00 5.52
296 297 1.000396 AATGCCCTCTCCACAAGCC 60.000 57.895 0.00 0.00 0.00 4.35
297 298 0.034670 AGAATGCCCTCTCCACAAGC 60.035 55.000 0.00 0.00 0.00 4.01
298 299 1.681166 CCAGAATGCCCTCTCCACAAG 60.681 57.143 0.00 0.00 31.97 3.16
299 300 0.329261 CCAGAATGCCCTCTCCACAA 59.671 55.000 0.00 0.00 31.97 3.33
300 301 0.547471 TCCAGAATGCCCTCTCCACA 60.547 55.000 0.00 0.00 31.97 4.17
302 303 0.841961 CATCCAGAATGCCCTCTCCA 59.158 55.000 0.00 0.00 31.97 3.86
303 304 1.135094 TCATCCAGAATGCCCTCTCC 58.865 55.000 0.00 0.00 35.17 3.71
305 306 3.054576 AGAATCATCCAGAATGCCCTCT 58.945 45.455 0.00 0.00 35.17 3.69
307 308 2.158505 CCAGAATCATCCAGAATGCCCT 60.159 50.000 0.00 0.00 35.17 5.19
308 309 2.236766 CCAGAATCATCCAGAATGCCC 58.763 52.381 0.00 0.00 35.17 5.36
309 310 2.236766 CCCAGAATCATCCAGAATGCC 58.763 52.381 0.00 0.00 35.17 4.40
310 311 1.612463 GCCCAGAATCATCCAGAATGC 59.388 52.381 0.00 0.00 35.17 3.56
311 312 3.225177 AGCCCAGAATCATCCAGAATG 57.775 47.619 0.00 0.00 36.65 2.67
312 313 3.563223 CAAGCCCAGAATCATCCAGAAT 58.437 45.455 0.00 0.00 0.00 2.40
316 317 0.396139 GCCAAGCCCAGAATCATCCA 60.396 55.000 0.00 0.00 0.00 3.41
317 318 1.111715 GGCCAAGCCCAGAATCATCC 61.112 60.000 0.00 0.00 44.06 3.51
318 319 2.423388 GGCCAAGCCCAGAATCATC 58.577 57.895 0.00 0.00 44.06 2.92
319 320 4.692930 GGCCAAGCCCAGAATCAT 57.307 55.556 0.00 0.00 44.06 2.45
334 335 3.810896 CACGGCGGCTTAAAGGGC 61.811 66.667 13.24 0.00 0.00 5.19
335 336 1.918868 GAACACGGCGGCTTAAAGGG 61.919 60.000 13.24 0.00 0.00 3.95
337 338 1.231958 TGGAACACGGCGGCTTAAAG 61.232 55.000 13.24 0.00 0.00 1.85
338 339 1.227883 TGGAACACGGCGGCTTAAA 60.228 52.632 13.24 0.00 0.00 1.52
339 340 1.669760 CTGGAACACGGCGGCTTAA 60.670 57.895 13.24 0.00 0.00 1.85
340 341 2.047655 CTGGAACACGGCGGCTTA 60.048 61.111 13.24 0.00 0.00 3.09
347 348 4.680237 TCGCCAGCTGGAACACGG 62.680 66.667 37.21 16.19 37.39 4.94
348 349 2.664851 TTCGCCAGCTGGAACACG 60.665 61.111 37.21 27.87 37.39 4.49
350 351 2.281484 GGTTCGCCAGCTGGAACA 60.281 61.111 37.21 15.78 43.29 3.18
351 352 2.180159 TAGGGTTCGCCAGCTGGAAC 62.180 60.000 37.21 29.06 41.33 3.62
352 353 1.485294 TTAGGGTTCGCCAGCTGGAA 61.485 55.000 37.21 19.91 39.65 3.53
353 354 1.485294 TTTAGGGTTCGCCAGCTGGA 61.485 55.000 37.21 14.26 39.65 3.86
355 356 1.463674 AATTTAGGGTTCGCCAGCTG 58.536 50.000 6.78 6.78 39.65 4.24
357 358 1.202143 CGAAATTTAGGGTTCGCCAGC 60.202 52.381 0.00 0.00 40.04 4.85
358 359 2.825086 CGAAATTTAGGGTTCGCCAG 57.175 50.000 0.00 0.00 40.04 4.85
364 365 3.081804 CTGAGCCACGAAATTTAGGGTT 58.918 45.455 9.13 3.39 30.92 4.11
365 366 2.304761 TCTGAGCCACGAAATTTAGGGT 59.695 45.455 7.88 7.88 33.98 4.34
367 368 3.561725 GGATCTGAGCCACGAAATTTAGG 59.438 47.826 7.16 1.83 0.00 2.69
368 369 4.034510 GTGGATCTGAGCCACGAAATTTAG 59.965 45.833 27.10 0.00 45.50 1.85
369 370 3.938963 GTGGATCTGAGCCACGAAATTTA 59.061 43.478 27.10 0.00 45.50 1.40
370 371 2.749621 GTGGATCTGAGCCACGAAATTT 59.250 45.455 27.10 0.00 45.50 1.82
371 372 2.359900 GTGGATCTGAGCCACGAAATT 58.640 47.619 27.10 0.00 45.50 1.82
372 373 2.029838 GTGGATCTGAGCCACGAAAT 57.970 50.000 27.10 0.00 45.50 2.17
373 374 3.532896 GTGGATCTGAGCCACGAAA 57.467 52.632 27.10 0.00 45.50 3.46
378 379 1.491274 TTGCTGGTGGATCTGAGCCA 61.491 55.000 11.22 11.22 0.00 4.75
380 381 1.307097 GATTGCTGGTGGATCTGAGC 58.693 55.000 0.00 0.00 0.00 4.26
382 383 1.065199 GTGGATTGCTGGTGGATCTGA 60.065 52.381 0.00 0.00 0.00 3.27
384 385 1.211457 GAGTGGATTGCTGGTGGATCT 59.789 52.381 0.00 0.00 0.00 2.75
386 387 0.257039 GGAGTGGATTGCTGGTGGAT 59.743 55.000 0.00 0.00 0.00 3.41
388 389 0.251297 TTGGAGTGGATTGCTGGTGG 60.251 55.000 0.00 0.00 0.00 4.61
389 390 1.619654 TTTGGAGTGGATTGCTGGTG 58.380 50.000 0.00 0.00 0.00 4.17
390 391 2.610438 ATTTGGAGTGGATTGCTGGT 57.390 45.000 0.00 0.00 0.00 4.00
392 393 2.489329 ACGAATTTGGAGTGGATTGCTG 59.511 45.455 0.00 0.00 0.00 4.41
393 394 2.749621 GACGAATTTGGAGTGGATTGCT 59.250 45.455 0.00 0.00 0.00 3.91
396 397 3.009033 TGAGGACGAATTTGGAGTGGATT 59.991 43.478 0.00 0.00 0.00 3.01
397 398 2.571653 TGAGGACGAATTTGGAGTGGAT 59.428 45.455 0.00 0.00 0.00 3.41
398 399 1.974957 TGAGGACGAATTTGGAGTGGA 59.025 47.619 0.00 0.00 0.00 4.02
400 401 5.376854 AATTTGAGGACGAATTTGGAGTG 57.623 39.130 0.00 0.00 36.93 3.51
401 402 5.123979 GCTAATTTGAGGACGAATTTGGAGT 59.876 40.000 0.00 0.00 39.77 3.85
403 404 5.253330 AGCTAATTTGAGGACGAATTTGGA 58.747 37.500 0.00 0.00 39.77 3.53
404 405 5.567138 AGCTAATTTGAGGACGAATTTGG 57.433 39.130 0.00 0.00 39.77 3.28
406 407 6.016276 ACACAAGCTAATTTGAGGACGAATTT 60.016 34.615 0.00 0.00 39.77 1.82
408 409 5.003804 ACACAAGCTAATTTGAGGACGAAT 58.996 37.500 0.00 0.00 0.00 3.34
410 411 4.002906 ACACAAGCTAATTTGAGGACGA 57.997 40.909 0.00 0.00 0.00 4.20
412 413 7.203255 AGTAAACACAAGCTAATTTGAGGAC 57.797 36.000 0.00 0.00 0.00 3.85
415 416 6.073222 ACGGAGTAAACACAAGCTAATTTGAG 60.073 38.462 0.00 0.00 41.94 3.02
416 417 5.761234 ACGGAGTAAACACAAGCTAATTTGA 59.239 36.000 0.00 0.00 41.94 2.69
418 419 6.628919 AACGGAGTAAACACAAGCTAATTT 57.371 33.333 0.00 0.00 45.00 1.82
419 420 6.628919 AAACGGAGTAAACACAAGCTAATT 57.371 33.333 0.00 0.00 45.00 1.40
420 421 6.485648 AGAAAACGGAGTAAACACAAGCTAAT 59.514 34.615 0.00 0.00 45.00 1.73
421 422 5.818857 AGAAAACGGAGTAAACACAAGCTAA 59.181 36.000 0.00 0.00 45.00 3.09
422 423 5.235616 CAGAAAACGGAGTAAACACAAGCTA 59.764 40.000 0.00 0.00 45.00 3.32
423 424 4.035208 CAGAAAACGGAGTAAACACAAGCT 59.965 41.667 0.00 0.00 45.00 3.74
424 425 4.279659 CAGAAAACGGAGTAAACACAAGC 58.720 43.478 0.00 0.00 45.00 4.01
425 426 4.201871 TGCAGAAAACGGAGTAAACACAAG 60.202 41.667 0.00 0.00 45.00 3.16
426 427 3.690139 TGCAGAAAACGGAGTAAACACAA 59.310 39.130 0.00 0.00 45.00 3.33
427 428 3.271729 TGCAGAAAACGGAGTAAACACA 58.728 40.909 0.00 0.00 45.00 3.72
428 429 3.955771 TGCAGAAAACGGAGTAAACAC 57.044 42.857 0.00 0.00 45.00 3.32
429 430 4.396790 ACTTTGCAGAAAACGGAGTAAACA 59.603 37.500 0.00 0.00 45.00 2.83
431 432 5.570234 AACTTTGCAGAAAACGGAGTAAA 57.430 34.783 0.00 0.00 45.00 2.01
432 433 4.260456 CGAACTTTGCAGAAAACGGAGTAA 60.260 41.667 0.00 0.00 45.00 2.24
433 434 3.246699 CGAACTTTGCAGAAAACGGAGTA 59.753 43.478 0.00 0.00 45.00 2.59
436 437 2.031191 GTCGAACTTTGCAGAAAACGGA 59.969 45.455 0.00 0.00 0.00 4.69
455 456 4.073549 ACAGGGTCTAGCTACGATATGTC 58.926 47.826 0.00 0.00 0.00 3.06
456 457 4.073549 GACAGGGTCTAGCTACGATATGT 58.926 47.826 0.00 0.00 0.00 2.29
457 458 4.072839 TGACAGGGTCTAGCTACGATATG 58.927 47.826 0.00 0.00 33.15 1.78
459 460 3.496337 CCTGACAGGGTCTAGCTACGATA 60.496 52.174 14.26 0.00 33.15 2.92
461 462 1.408405 CCTGACAGGGTCTAGCTACGA 60.408 57.143 14.26 0.00 33.15 3.43
462 463 1.025812 CCTGACAGGGTCTAGCTACG 58.974 60.000 14.26 0.00 33.15 3.51
463 464 0.747852 GCCTGACAGGGTCTAGCTAC 59.252 60.000 23.09 0.00 35.37 3.58
464 465 0.752009 CGCCTGACAGGGTCTAGCTA 60.752 60.000 23.09 0.00 35.37 3.32
465 466 2.055042 CGCCTGACAGGGTCTAGCT 61.055 63.158 23.09 0.00 35.37 3.32
466 467 2.496817 CGCCTGACAGGGTCTAGC 59.503 66.667 23.09 6.35 35.37 3.42
467 468 2.427245 CCCGCCTGACAGGGTCTAG 61.427 68.421 23.09 1.99 42.67 2.43
468 469 2.363795 CCCGCCTGACAGGGTCTA 60.364 66.667 23.09 0.00 42.67 2.59
473 474 2.113139 AACAACCCGCCTGACAGG 59.887 61.111 17.83 17.83 38.80 4.00
475 476 2.203280 CCAACAACCCGCCTGACA 60.203 61.111 0.00 0.00 0.00 3.58
476 477 1.966451 CTCCAACAACCCGCCTGAC 60.966 63.158 0.00 0.00 0.00 3.51
477 478 1.488705 ATCTCCAACAACCCGCCTGA 61.489 55.000 0.00 0.00 0.00 3.86
479 480 1.002134 CATCTCCAACAACCCGCCT 60.002 57.895 0.00 0.00 0.00 5.52
481 482 1.648467 GAGCATCTCCAACAACCCGC 61.648 60.000 0.00 0.00 0.00 6.13
482 483 2.471255 GAGCATCTCCAACAACCCG 58.529 57.895 0.00 0.00 0.00 5.28
489 490 7.085979 GGACAAGTCCTAAGAGCATCTCCAA 62.086 48.000 11.94 0.00 46.21 3.53
490 491 5.658849 GGACAAGTCCTAAGAGCATCTCCA 61.659 50.000 11.94 0.00 46.21 3.86
491 492 3.181470 GGACAAGTCCTAAGAGCATCTCC 60.181 52.174 11.94 0.00 46.21 3.71
500 501 9.604253 AGGATTTTCCCTTGGACAAGTCCTAAG 62.604 44.444 19.20 18.04 43.33 2.18
501 502 7.901574 AGGATTTTCCCTTGGACAAGTCCTAA 61.902 42.308 19.20 11.11 43.33 2.69
502 503 6.474440 AGGATTTTCCCTTGGACAAGTCCTA 61.474 44.000 19.20 11.48 43.33 2.94
503 504 5.754140 AGGATTTTCCCTTGGACAAGTCCT 61.754 45.833 19.20 11.27 43.33 3.85
505 506 3.759086 GAGGATTTTCCCTTGGACAAGTC 59.241 47.826 10.81 1.35 37.19 3.01
508 509 4.151883 CAAGAGGATTTTCCCTTGGACAA 58.848 43.478 12.96 0.00 39.26 3.18
509 510 3.140144 ACAAGAGGATTTTCCCTTGGACA 59.860 43.478 19.73 0.00 43.23 4.02
510 511 3.767711 ACAAGAGGATTTTCCCTTGGAC 58.232 45.455 19.73 0.00 43.23 4.02
511 512 4.601857 AGTACAAGAGGATTTTCCCTTGGA 59.398 41.667 19.73 13.52 43.23 3.53
512 513 4.702131 CAGTACAAGAGGATTTTCCCTTGG 59.298 45.833 19.73 9.20 43.23 3.61
513 514 4.156739 GCAGTACAAGAGGATTTTCCCTTG 59.843 45.833 16.58 16.58 43.88 3.61
514 515 4.043435 AGCAGTACAAGAGGATTTTCCCTT 59.957 41.667 0.00 0.00 37.19 3.95
517 518 5.966742 AAAGCAGTACAAGAGGATTTTCC 57.033 39.130 0.00 0.00 36.58 3.13
518 519 7.040686 TGGTAAAAGCAGTACAAGAGGATTTTC 60.041 37.037 0.00 0.00 0.00 2.29
519 520 6.775629 TGGTAAAAGCAGTACAAGAGGATTTT 59.224 34.615 0.00 0.00 0.00 1.82
520 521 6.303839 TGGTAAAAGCAGTACAAGAGGATTT 58.696 36.000 0.00 0.00 0.00 2.17
521 522 5.876357 TGGTAAAAGCAGTACAAGAGGATT 58.124 37.500 0.00 0.00 0.00 3.01
523 524 4.967084 TGGTAAAAGCAGTACAAGAGGA 57.033 40.909 0.00 0.00 0.00 3.71
524 525 7.865706 AATATGGTAAAAGCAGTACAAGAGG 57.134 36.000 0.00 0.00 0.00 3.69
546 547 9.343994 AGGGAAACTGATAGATCCATGTATAAT 57.656 33.333 0.00 0.00 33.48 1.28
547 548 8.742125 AGGGAAACTGATAGATCCATGTATAA 57.258 34.615 0.00 0.00 33.48 0.98
548 549 9.837681 TTAGGGAAACTGATAGATCCATGTATA 57.162 33.333 0.00 0.00 33.48 1.47
549 550 8.742125 TTAGGGAAACTGATAGATCCATGTAT 57.258 34.615 0.00 0.00 33.48 2.29
550 551 8.742125 ATTAGGGAAACTGATAGATCCATGTA 57.258 34.615 0.00 0.00 33.48 2.29
553 554 6.794493 TGGATTAGGGAAACTGATAGATCCAT 59.206 38.462 0.00 0.00 36.52 3.41
554 555 6.150332 TGGATTAGGGAAACTGATAGATCCA 58.850 40.000 0.00 0.00 38.45 3.41
555 556 6.271159 ACTGGATTAGGGAAACTGATAGATCC 59.729 42.308 0.00 0.00 0.00 3.36
557 558 8.798975 TTACTGGATTAGGGAAACTGATAGAT 57.201 34.615 0.00 0.00 0.00 1.98
558 559 7.844779 ACTTACTGGATTAGGGAAACTGATAGA 59.155 37.037 0.00 0.00 0.00 1.98
559 560 8.024145 ACTTACTGGATTAGGGAAACTGATAG 57.976 38.462 0.00 0.00 0.00 2.08
561 562 6.893020 ACTTACTGGATTAGGGAAACTGAT 57.107 37.500 0.00 0.00 0.00 2.90
562 563 6.697641 AACTTACTGGATTAGGGAAACTGA 57.302 37.500 0.00 0.00 0.00 3.41
563 564 6.374613 GGAAACTTACTGGATTAGGGAAACTG 59.625 42.308 0.00 0.00 0.00 3.16
564 565 6.045106 TGGAAACTTACTGGATTAGGGAAACT 59.955 38.462 0.00 0.00 0.00 2.66
565 566 6.243148 TGGAAACTTACTGGATTAGGGAAAC 58.757 40.000 0.00 0.00 0.00 2.78
566 567 6.457159 TGGAAACTTACTGGATTAGGGAAA 57.543 37.500 0.00 0.00 0.00 3.13
567 568 6.447084 AGATGGAAACTTACTGGATTAGGGAA 59.553 38.462 0.00 0.00 0.00 3.97
568 569 5.970640 AGATGGAAACTTACTGGATTAGGGA 59.029 40.000 0.00 0.00 0.00 4.20
569 570 6.253946 AGATGGAAACTTACTGGATTAGGG 57.746 41.667 0.00 0.00 0.00 3.53
570 571 8.265055 TGTTAGATGGAAACTTACTGGATTAGG 58.735 37.037 0.00 0.00 0.00 2.69
571 572 9.319143 CTGTTAGATGGAAACTTACTGGATTAG 57.681 37.037 0.00 0.00 0.00 1.73
573 574 7.607991 CACTGTTAGATGGAAACTTACTGGATT 59.392 37.037 0.00 0.00 0.00 3.01
575 576 6.042781 ACACTGTTAGATGGAAACTTACTGGA 59.957 38.462 0.00 0.00 0.00 3.86
578 579 7.062749 TGACACTGTTAGATGGAAACTTACT 57.937 36.000 0.00 0.00 0.00 2.24
580 581 8.918202 AAATGACACTGTTAGATGGAAACTTA 57.082 30.769 0.00 0.00 0.00 2.24
581 582 7.823745 AAATGACACTGTTAGATGGAAACTT 57.176 32.000 0.00 0.00 0.00 2.66
582 583 7.502226 TGAAAATGACACTGTTAGATGGAAACT 59.498 33.333 0.00 0.00 0.00 2.66
583 584 7.648142 TGAAAATGACACTGTTAGATGGAAAC 58.352 34.615 0.00 0.00 0.00 2.78
585 586 7.665145 TGATGAAAATGACACTGTTAGATGGAA 59.335 33.333 0.00 0.00 0.00 3.53
586 587 7.167535 TGATGAAAATGACACTGTTAGATGGA 58.832 34.615 0.00 0.00 0.00 3.41
587 588 7.120285 ACTGATGAAAATGACACTGTTAGATGG 59.880 37.037 0.00 0.00 0.00 3.51
589 590 7.879677 TGACTGATGAAAATGACACTGTTAGAT 59.120 33.333 0.00 0.00 0.00 1.98
590 591 7.216494 TGACTGATGAAAATGACACTGTTAGA 58.784 34.615 0.00 0.00 0.00 2.10
592 593 7.879677 AGATGACTGATGAAAATGACACTGTTA 59.120 33.333 0.00 0.00 0.00 2.41
594 595 6.236409 AGATGACTGATGAAAATGACACTGT 58.764 36.000 0.00 0.00 0.00 3.55
595 596 6.455246 CGAGATGACTGATGAAAATGACACTG 60.455 42.308 0.00 0.00 0.00 3.66
596 597 5.579904 CGAGATGACTGATGAAAATGACACT 59.420 40.000 0.00 0.00 0.00 3.55
598 599 5.578336 GTCGAGATGACTGATGAAAATGACA 59.422 40.000 0.00 0.00 44.58 3.58
599 600 6.030379 GTCGAGATGACTGATGAAAATGAC 57.970 41.667 0.00 0.00 44.58 3.06
613 614 7.387673 ACAATGTTTGTAAAGATGTCGAGATGA 59.612 33.333 0.00 0.00 43.27 2.92
614 615 7.479603 CACAATGTTTGTAAAGATGTCGAGATG 59.520 37.037 0.00 0.00 43.23 2.90
615 616 7.173218 ACACAATGTTTGTAAAGATGTCGAGAT 59.827 33.333 0.00 0.00 43.23 2.75
616 617 6.481976 ACACAATGTTTGTAAAGATGTCGAGA 59.518 34.615 0.00 0.00 43.23 4.04
617 618 6.658831 ACACAATGTTTGTAAAGATGTCGAG 58.341 36.000 0.00 0.00 43.23 4.04
618 619 6.612247 ACACAATGTTTGTAAAGATGTCGA 57.388 33.333 0.00 0.00 43.23 4.20
619 620 8.775220 TTTACACAATGTTTGTAAAGATGTCG 57.225 30.769 5.44 0.00 42.03 4.35
626 627 7.259161 GGGTCACTTTACACAATGTTTGTAAA 58.741 34.615 8.31 8.31 43.76 2.01
627 628 6.458478 CGGGTCACTTTACACAATGTTTGTAA 60.458 38.462 0.00 0.00 43.23 2.41
629 630 4.201970 CGGGTCACTTTACACAATGTTTGT 60.202 41.667 0.00 0.00 46.75 2.83
630 631 4.035792 TCGGGTCACTTTACACAATGTTTG 59.964 41.667 0.00 0.00 0.00 2.93
631 632 4.200874 TCGGGTCACTTTACACAATGTTT 58.799 39.130 0.00 0.00 0.00 2.83
632 633 3.811083 TCGGGTCACTTTACACAATGTT 58.189 40.909 0.00 0.00 0.00 2.71
633 634 3.478857 TCGGGTCACTTTACACAATGT 57.521 42.857 0.00 0.00 0.00 2.71
634 635 4.822036 TTTCGGGTCACTTTACACAATG 57.178 40.909 0.00 0.00 0.00 2.82
660 661 5.420739 AGTTGGGTCAGTTTACACAATGTTT 59.579 36.000 0.00 0.00 44.20 2.83
662 663 4.532834 AGTTGGGTCAGTTTACACAATGT 58.467 39.130 0.00 0.00 44.20 2.71
671 4895 2.241176 TGTTGGAGAGTTGGGTCAGTTT 59.759 45.455 0.00 0.00 0.00 2.66
696 4920 0.675522 TCCGACGAAATTTGAGGGGC 60.676 55.000 0.00 0.00 0.00 5.80
739 4965 7.286546 CAGGAGGAGAAAGTGATAGTGATAAGA 59.713 40.741 0.00 0.00 0.00 2.10
762 4996 0.459899 TCGGATCGGTGAATGACAGG 59.540 55.000 0.00 0.00 0.00 4.00
763 4997 1.405463 TCTCGGATCGGTGAATGACAG 59.595 52.381 2.87 0.00 0.00 3.51
764 4998 1.134367 GTCTCGGATCGGTGAATGACA 59.866 52.381 6.61 0.00 0.00 3.58
765 4999 1.841450 GTCTCGGATCGGTGAATGAC 58.159 55.000 6.61 3.19 0.00 3.06
881 5127 2.896168 CAGAGTATTTAAACGGGGCGA 58.104 47.619 0.00 0.00 0.00 5.54
885 5133 3.118371 AGGAGGCAGAGTATTTAAACGGG 60.118 47.826 0.00 0.00 0.00 5.28
1507 5841 2.217847 CAGAACAACGACCACAGTTACG 59.782 50.000 0.00 0.00 0.00 3.18
1513 5847 2.605837 TTAGCAGAACAACGACCACA 57.394 45.000 0.00 0.00 0.00 4.17
1609 5953 2.024414 ACACTGGGAAACAAGAACAGC 58.976 47.619 0.00 0.00 32.60 4.40
1629 5973 5.800296 TGTTAAGGGAATGTCAGAATCGAA 58.200 37.500 0.00 0.00 0.00 3.71
1636 5980 4.676196 GCATTGCTGTTAAGGGAATGTCAG 60.676 45.833 17.43 3.74 42.02 3.51
1681 6025 1.035385 TCATCTCCGGCGCTGTCTAA 61.035 55.000 16.49 0.00 0.00 2.10
1738 6092 4.767255 ACAGCCGTAGCCAGCAGC 62.767 66.667 0.00 0.00 41.25 5.25
1799 6153 0.759346 GGATGGAGTTGCCGGAGTAT 59.241 55.000 5.05 0.00 40.66 2.12
1893 6265 2.693069 CTCTTGTCAAGCATTCCGTCT 58.307 47.619 7.78 0.00 0.00 4.18
1916 6288 1.010462 GGTGTTGTTTCGACGCCAC 60.010 57.895 13.00 0.00 45.11 5.01
1954 6326 1.586028 CAACAATGTTGGGGCCGAG 59.414 57.895 17.71 0.00 0.00 4.63
1964 6336 4.248859 CTGTAGCACTCTAGCAACAATGT 58.751 43.478 0.00 0.00 36.85 2.71
1967 6339 2.612972 GCCTGTAGCACTCTAGCAACAA 60.613 50.000 0.00 0.00 42.97 2.83
1990 6362 2.560861 CCACGAACATGTTGCCCG 59.439 61.111 17.58 15.73 0.00 6.13
2117 6525 3.274095 AGCTCTCTGGATAAAGGCAAC 57.726 47.619 0.00 0.00 0.00 4.17
2160 6571 2.145536 GAAAAATTTGCCCACTGCCAG 58.854 47.619 0.00 0.00 40.16 4.85
2180 6591 9.701098 TGTACTACAGGTGTAATTAACTCAAAG 57.299 33.333 0.00 0.00 0.00 2.77
2237 6658 8.257602 AGTTATTGTACCATTTTTCTGGGTTT 57.742 30.769 0.00 0.00 40.85 3.27
2360 6831 0.874390 GTTTGAATCACGGCAGAGCA 59.126 50.000 0.00 0.00 0.00 4.26
2381 6852 5.357314 CCTAGACTTCTAAGATTGTGTCCGA 59.643 44.000 0.00 0.00 0.00 4.55
2382 6853 5.583495 CCTAGACTTCTAAGATTGTGTCCG 58.417 45.833 0.00 0.00 0.00 4.79
2383 6854 5.353111 GCCTAGACTTCTAAGATTGTGTCC 58.647 45.833 0.00 0.00 0.00 4.02
2389 7479 4.402793 TCAAGCGCCTAGACTTCTAAGATT 59.597 41.667 2.29 0.00 0.00 2.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.