Multiple sequence alignment - TraesCS4D01G197800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G197800 chr4D 100.000 2264 0 0 1 2264 343087889 343090152 0.000000e+00 4181.0
1 TraesCS4D01G197800 chr4D 84.184 588 51 19 754 1323 343061211 343061774 1.190000e-147 532.0
2 TraesCS4D01G197800 chr4D 86.081 467 58 5 3 464 339050609 339051073 1.560000e-136 496.0
3 TraesCS4D01G197800 chr4D 100.000 92 0 0 1808 1899 343089606 343089697 1.080000e-38 171.0
4 TraesCS4D01G197800 chr4D 100.000 92 0 0 1718 1809 343089696 343089787 1.080000e-38 171.0
5 TraesCS4D01G197800 chr4A 90.919 892 61 11 716 1594 122627782 122626898 0.000000e+00 1181.0
6 TraesCS4D01G197800 chr4A 84.864 588 62 12 757 1334 122736425 122735855 3.260000e-158 568.0
7 TraesCS4D01G197800 chr4A 85.165 182 16 3 463 634 122628679 122628499 2.310000e-40 176.0
8 TraesCS4D01G197800 chr4A 91.579 95 8 0 632 726 122628261 122628167 5.070000e-27 132.0
9 TraesCS4D01G197800 chr4A 80.503 159 24 6 2067 2223 657019379 657019532 5.110000e-22 115.0
10 TraesCS4D01G197800 chr7D 96.336 464 17 0 1 464 97307559 97308022 0.000000e+00 763.0
11 TraesCS4D01G197800 chr7D 89.144 479 17 10 1810 2264 114608959 114608492 4.220000e-157 564.0
12 TraesCS4D01G197800 chr7D 86.938 467 56 3 3 465 553861967 553862432 9.270000e-144 520.0
13 TraesCS4D01G197800 chr7D 96.744 215 7 0 1595 1809 114609084 114608870 2.140000e-95 359.0
14 TraesCS4D01G197800 chr7D 89.262 149 12 3 2077 2223 471058237 471058091 1.380000e-42 183.0
15 TraesCS4D01G197800 chr7D 82.911 158 13 4 2070 2223 37750580 37750433 1.820000e-26 130.0
16 TraesCS4D01G197800 chr7D 79.570 93 19 0 1594 1686 616232354 616232262 1.450000e-07 67.6
17 TraesCS4D01G197800 chr1B 94.650 486 21 3 1 484 657422307 657422789 0.000000e+00 749.0
18 TraesCS4D01G197800 chr1B 94.421 466 24 1 1 464 32400727 32400262 0.000000e+00 715.0
19 TraesCS4D01G197800 chr5B 95.279 466 20 1 1 464 432174055 432173590 0.000000e+00 737.0
20 TraesCS4D01G197800 chr7A 88.627 466 46 5 3 464 78833243 78833705 5.460000e-156 560.0
21 TraesCS4D01G197800 chr4B 81.831 710 76 26 747 1437 424861921 424862596 4.250000e-152 547.0
22 TraesCS4D01G197800 chr6D 87.420 469 49 8 3 464 143675456 143675921 4.280000e-147 531.0
23 TraesCS4D01G197800 chr3A 87.389 452 50 5 17 464 705315497 705315945 1.550000e-141 512.0
24 TraesCS4D01G197800 chr3A 83.333 96 16 0 1591 1686 83237980 83238075 3.100000e-14 89.8
25 TraesCS4D01G197800 chr3A 82.292 96 17 0 1591 1686 83301153 83301248 1.440000e-12 84.2
26 TraesCS4D01G197800 chr1D 89.441 161 13 3 2067 2223 121242306 121242466 1.370000e-47 200.0
27 TraesCS4D01G197800 chr3D 86.538 156 18 3 2070 2223 536987105 536986951 3.870000e-38 169.0
28 TraesCS4D01G197800 chr3D 83.333 162 13 4 2067 2224 25460329 25460480 1.090000e-28 137.0
29 TraesCS4D01G197800 chr6A 81.122 196 35 2 1595 1788 489508183 489508378 3.010000e-34 156.0
30 TraesCS4D01G197800 chr6A 86.842 76 9 1 1595 1670 531716354 531716280 1.440000e-12 84.2
31 TraesCS4D01G197800 chr2D 85.987 157 8 5 2070 2223 487273744 487273599 3.010000e-34 156.0
32 TraesCS4D01G197800 chr2D 78.632 117 24 1 1594 1709 394557328 394557212 2.410000e-10 76.8
33 TraesCS4D01G197800 chr2D 84.722 72 11 0 1591 1662 181208955 181209026 3.120000e-09 73.1
34 TraesCS4D01G197800 chr5A 84.000 150 11 5 2077 2223 327915516 327915377 5.070000e-27 132.0
35 TraesCS4D01G197800 chr7B 82.500 160 11 8 2070 2223 99684426 99684278 8.490000e-25 124.0
36 TraesCS4D01G197800 chr7B 80.597 134 13 4 2095 2225 24413598 24413475 8.610000e-15 91.6
37 TraesCS4D01G197800 chr6B 80.435 92 18 0 1595 1686 113630306 113630215 1.120000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G197800 chr4D 343087889 343090152 2263 False 1507.666667 4181 100.000 1 2264 3 chr4D.!!$F3 2263
1 TraesCS4D01G197800 chr4D 343061211 343061774 563 False 532.000000 532 84.184 754 1323 1 chr4D.!!$F2 569
2 TraesCS4D01G197800 chr4A 122735855 122736425 570 True 568.000000 568 84.864 757 1334 1 chr4A.!!$R1 577
3 TraesCS4D01G197800 chr4A 122626898 122628679 1781 True 496.333333 1181 89.221 463 1594 3 chr4A.!!$R2 1131
4 TraesCS4D01G197800 chr7D 114608492 114609084 592 True 461.500000 564 92.944 1595 2264 2 chr7D.!!$R4 669
5 TraesCS4D01G197800 chr4B 424861921 424862596 675 False 547.000000 547 81.831 747 1437 1 chr4B.!!$F1 690

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
336 337 0.031178 CTGTTTGGCTTGTCTGTGGC 59.969 55.0 0.0 0.0 0.0 5.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2201 2905 0.106419 GGTGTTTGGTTCCAGGGACA 60.106 55.0 0.0 0.0 0.0 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.063529 CTGGTGATGCGTGTGGTT 57.936 55.556 0.00 0.00 0.00 3.67
18 19 1.575922 CTGGTGATGCGTGTGGTTG 59.424 57.895 0.00 0.00 0.00 3.77
19 20 1.855213 CTGGTGATGCGTGTGGTTGG 61.855 60.000 0.00 0.00 0.00 3.77
20 21 2.255252 GTGATGCGTGTGGTTGGC 59.745 61.111 0.00 0.00 0.00 4.52
21 22 3.353029 TGATGCGTGTGGTTGGCG 61.353 61.111 0.00 0.00 0.00 5.69
22 23 3.353836 GATGCGTGTGGTTGGCGT 61.354 61.111 0.00 0.00 0.00 5.68
23 24 2.903547 GATGCGTGTGGTTGGCGTT 61.904 57.895 0.00 0.00 0.00 4.84
24 25 3.192954 ATGCGTGTGGTTGGCGTTG 62.193 57.895 0.00 0.00 0.00 4.10
26 27 4.954680 CGTGTGGTTGGCGTTGCG 62.955 66.667 0.00 0.00 0.00 4.85
27 28 3.578272 GTGTGGTTGGCGTTGCGA 61.578 61.111 0.00 0.00 0.00 5.10
28 29 3.578272 TGTGGTTGGCGTTGCGAC 61.578 61.111 0.00 0.00 34.27 5.19
29 30 3.276846 GTGGTTGGCGTTGCGACT 61.277 61.111 1.84 0.00 35.04 4.18
30 31 2.970324 TGGTTGGCGTTGCGACTC 60.970 61.111 1.84 0.00 35.04 3.36
31 32 4.072088 GGTTGGCGTTGCGACTCG 62.072 66.667 1.84 0.00 35.04 4.18
32 33 3.335534 GTTGGCGTTGCGACTCGT 61.336 61.111 1.84 0.00 35.04 4.18
33 34 3.334751 TTGGCGTTGCGACTCGTG 61.335 61.111 1.84 0.00 35.04 4.35
34 35 4.578898 TGGCGTTGCGACTCGTGT 62.579 61.111 1.84 0.00 35.04 4.49
35 36 4.059459 GGCGTTGCGACTCGTGTG 62.059 66.667 1.84 0.00 0.00 3.82
36 37 3.028019 GCGTTGCGACTCGTGTGA 61.028 61.111 1.84 0.00 0.00 3.58
37 38 2.372690 GCGTTGCGACTCGTGTGAT 61.373 57.895 1.84 0.00 0.00 3.06
38 39 1.412226 CGTTGCGACTCGTGTGATG 59.588 57.895 1.84 0.00 0.00 3.07
39 40 1.001745 CGTTGCGACTCGTGTGATGA 61.002 55.000 1.84 0.00 0.00 2.92
40 41 0.435008 GTTGCGACTCGTGTGATGAC 59.565 55.000 0.00 0.00 0.00 3.06
41 42 1.001745 TTGCGACTCGTGTGATGACG 61.002 55.000 0.00 0.00 40.83 4.35
42 43 1.154282 GCGACTCGTGTGATGACGA 60.154 57.895 0.00 0.00 45.84 4.20
43 44 1.396543 GCGACTCGTGTGATGACGAC 61.397 60.000 0.00 0.00 43.26 4.34
44 45 1.120714 CGACTCGTGTGATGACGACG 61.121 60.000 0.00 0.00 43.26 5.12
45 46 0.165295 GACTCGTGTGATGACGACGA 59.835 55.000 0.00 8.91 43.26 4.20
46 47 0.803117 ACTCGTGTGATGACGACGAT 59.197 50.000 0.00 0.00 43.26 3.73
47 48 1.183511 CTCGTGTGATGACGACGATG 58.816 55.000 0.00 3.10 43.26 3.84
48 49 0.800012 TCGTGTGATGACGACGATGA 59.200 50.000 0.00 0.00 43.26 2.92
49 50 1.400494 TCGTGTGATGACGACGATGAT 59.600 47.619 0.00 0.00 43.26 2.45
50 51 1.514402 CGTGTGATGACGACGATGATG 59.486 52.381 0.00 0.00 42.10 3.07
51 52 1.854743 GTGTGATGACGACGATGATGG 59.145 52.381 0.00 0.00 0.00 3.51
52 53 0.855349 GTGATGACGACGATGATGGC 59.145 55.000 0.00 0.00 0.00 4.40
53 54 0.594796 TGATGACGACGATGATGGCG 60.595 55.000 0.00 0.00 0.00 5.69
54 55 0.595053 GATGACGACGATGATGGCGT 60.595 55.000 0.00 0.00 45.79 5.68
55 56 0.871592 ATGACGACGATGATGGCGTG 60.872 55.000 0.00 0.00 42.77 5.34
56 57 2.860628 GACGACGATGATGGCGTGC 61.861 63.158 0.00 0.00 42.77 5.34
57 58 3.976375 CGACGATGATGGCGTGCG 61.976 66.667 0.00 0.00 42.77 5.34
58 59 2.582226 GACGATGATGGCGTGCGA 60.582 61.111 0.00 0.00 42.77 5.10
59 60 2.125713 ACGATGATGGCGTGCGAA 60.126 55.556 0.00 0.00 40.94 4.70
60 61 2.082437 GACGATGATGGCGTGCGAAG 62.082 60.000 0.00 0.00 42.77 3.79
73 74 4.891566 CGAAGCTAGGTCGTTGCT 57.108 55.556 0.00 0.00 38.87 3.91
75 76 0.716108 CGAAGCTAGGTCGTTGCTTG 59.284 55.000 16.94 7.53 45.56 4.01
76 77 0.444260 GAAGCTAGGTCGTTGCTTGC 59.556 55.000 16.94 7.03 45.56 4.01
77 78 0.955919 AAGCTAGGTCGTTGCTTGCC 60.956 55.000 12.38 0.00 44.16 4.52
78 79 2.399356 GCTAGGTCGTTGCTTGCCC 61.399 63.158 0.00 0.00 0.00 5.36
79 80 1.296715 CTAGGTCGTTGCTTGCCCT 59.703 57.895 0.00 0.00 0.00 5.19
80 81 0.321653 CTAGGTCGTTGCTTGCCCTT 60.322 55.000 0.00 0.00 0.00 3.95
81 82 0.321298 TAGGTCGTTGCTTGCCCTTC 60.321 55.000 0.00 0.00 0.00 3.46
82 83 1.600916 GGTCGTTGCTTGCCCTTCT 60.601 57.895 0.00 0.00 0.00 2.85
83 84 1.576421 GTCGTTGCTTGCCCTTCTG 59.424 57.895 0.00 0.00 0.00 3.02
84 85 0.884704 GTCGTTGCTTGCCCTTCTGA 60.885 55.000 0.00 0.00 0.00 3.27
85 86 0.036732 TCGTTGCTTGCCCTTCTGAT 59.963 50.000 0.00 0.00 0.00 2.90
86 87 0.169672 CGTTGCTTGCCCTTCTGATG 59.830 55.000 0.00 0.00 0.00 3.07
87 88 1.251251 GTTGCTTGCCCTTCTGATGT 58.749 50.000 0.00 0.00 0.00 3.06
88 89 1.200948 GTTGCTTGCCCTTCTGATGTC 59.799 52.381 0.00 0.00 0.00 3.06
89 90 0.674581 TGCTTGCCCTTCTGATGTCG 60.675 55.000 0.00 0.00 0.00 4.35
90 91 0.391661 GCTTGCCCTTCTGATGTCGA 60.392 55.000 0.00 0.00 0.00 4.20
91 92 1.745141 GCTTGCCCTTCTGATGTCGAT 60.745 52.381 0.00 0.00 0.00 3.59
92 93 1.938577 CTTGCCCTTCTGATGTCGATG 59.061 52.381 0.00 0.00 0.00 3.84
93 94 0.178767 TGCCCTTCTGATGTCGATGG 59.821 55.000 0.00 0.00 0.00 3.51
94 95 0.179000 GCCCTTCTGATGTCGATGGT 59.821 55.000 0.00 0.00 0.00 3.55
95 96 1.808133 GCCCTTCTGATGTCGATGGTC 60.808 57.143 0.00 0.00 0.00 4.02
96 97 1.202580 CCCTTCTGATGTCGATGGTCC 60.203 57.143 0.00 0.00 0.00 4.46
97 98 1.536922 CCTTCTGATGTCGATGGTCCG 60.537 57.143 0.00 0.00 0.00 4.79
98 99 0.459899 TTCTGATGTCGATGGTCCGG 59.540 55.000 0.00 0.00 0.00 5.14
99 100 0.683179 TCTGATGTCGATGGTCCGGT 60.683 55.000 0.00 0.00 0.00 5.28
100 101 0.528466 CTGATGTCGATGGTCCGGTG 60.528 60.000 0.00 0.00 0.00 4.94
101 102 1.883084 GATGTCGATGGTCCGGTGC 60.883 63.158 0.00 0.00 0.00 5.01
102 103 3.716539 ATGTCGATGGTCCGGTGCG 62.717 63.158 0.00 0.00 0.00 5.34
107 108 4.424711 ATGGTCCGGTGCGCCAAT 62.425 61.111 18.18 0.00 35.74 3.16
114 115 4.054825 GGTGCGCCAATGGGTGTG 62.055 66.667 12.58 0.00 46.76 3.82
115 116 4.722855 GTGCGCCAATGGGTGTGC 62.723 66.667 4.18 0.00 46.76 4.57
118 119 2.045438 CGCCAATGGGTGTGCCTA 60.045 61.111 0.00 0.00 39.94 3.93
119 120 1.453745 CGCCAATGGGTGTGCCTAT 60.454 57.895 0.00 0.00 39.94 2.57
120 121 1.727511 CGCCAATGGGTGTGCCTATG 61.728 60.000 0.00 0.00 39.94 2.23
121 122 2.019897 GCCAATGGGTGTGCCTATGC 62.020 60.000 0.00 0.00 36.01 3.14
122 123 0.396139 CCAATGGGTGTGCCTATGCT 60.396 55.000 0.00 0.00 36.01 3.79
123 124 0.742505 CAATGGGTGTGCCTATGCTG 59.257 55.000 0.00 0.00 36.01 4.41
124 125 0.396139 AATGGGTGTGCCTATGCTGG 60.396 55.000 0.00 0.00 36.01 4.85
132 133 4.154296 CCTATGCTGGCTTCTGGC 57.846 61.111 0.00 0.00 40.90 4.85
133 134 1.530771 CCTATGCTGGCTTCTGGCT 59.469 57.895 0.00 0.00 41.46 4.75
134 135 0.818445 CCTATGCTGGCTTCTGGCTG 60.818 60.000 0.00 0.00 41.46 4.85
135 136 0.107312 CTATGCTGGCTTCTGGCTGT 60.107 55.000 0.00 0.00 41.46 4.40
136 137 0.393402 TATGCTGGCTTCTGGCTGTG 60.393 55.000 0.00 0.00 41.46 3.66
137 138 2.033141 GCTGGCTTCTGGCTGTGA 59.967 61.111 0.00 0.00 41.46 3.58
138 139 2.331132 GCTGGCTTCTGGCTGTGAC 61.331 63.158 0.00 0.00 41.46 3.67
139 140 1.071987 CTGGCTTCTGGCTGTGACA 59.928 57.895 0.00 0.00 41.46 3.58
140 141 0.954449 CTGGCTTCTGGCTGTGACAG 60.954 60.000 8.52 8.52 40.64 3.51
146 147 1.709578 TCTGGCTGTGACAGAGAAGT 58.290 50.000 18.18 0.00 43.49 3.01
147 148 1.615883 TCTGGCTGTGACAGAGAAGTC 59.384 52.381 18.18 0.00 43.49 3.01
148 149 0.315251 TGGCTGTGACAGAGAAGTCG 59.685 55.000 18.18 0.00 41.41 4.18
149 150 0.389166 GGCTGTGACAGAGAAGTCGG 60.389 60.000 18.18 0.00 41.41 4.79
150 151 0.598562 GCTGTGACAGAGAAGTCGGA 59.401 55.000 18.18 0.00 41.41 4.55
151 152 1.402194 GCTGTGACAGAGAAGTCGGAG 60.402 57.143 18.18 0.00 41.41 4.63
152 153 0.598562 TGTGACAGAGAAGTCGGAGC 59.401 55.000 0.00 0.00 41.41 4.70
153 154 0.885196 GTGACAGAGAAGTCGGAGCT 59.115 55.000 0.00 0.00 41.41 4.09
154 155 0.884514 TGACAGAGAAGTCGGAGCTG 59.115 55.000 0.00 0.00 41.41 4.24
155 156 0.457681 GACAGAGAAGTCGGAGCTGC 60.458 60.000 0.00 0.00 0.00 5.25
156 157 1.515952 CAGAGAAGTCGGAGCTGCG 60.516 63.158 22.84 22.84 0.00 5.18
157 158 1.974343 AGAGAAGTCGGAGCTGCGT 60.974 57.895 27.20 8.39 0.00 5.24
158 159 1.803519 GAGAAGTCGGAGCTGCGTG 60.804 63.158 27.20 0.00 0.00 5.34
159 160 3.482783 GAAGTCGGAGCTGCGTGC 61.483 66.667 27.20 19.98 43.29 5.34
160 161 4.299547 AAGTCGGAGCTGCGTGCA 62.300 61.111 27.20 5.34 45.94 4.57
161 162 3.807631 AAGTCGGAGCTGCGTGCAA 62.808 57.895 27.20 4.92 45.94 4.08
162 163 3.121030 GTCGGAGCTGCGTGCAAT 61.121 61.111 27.20 0.00 45.94 3.56
163 164 3.120385 TCGGAGCTGCGTGCAATG 61.120 61.111 27.20 0.00 45.94 2.82
171 172 4.824166 GCGTGCAATGCCTCTGCG 62.824 66.667 1.53 0.96 45.05 5.18
172 173 4.170062 CGTGCAATGCCTCTGCGG 62.170 66.667 1.53 0.00 42.97 5.69
189 190 3.458872 GGCAACGATGACTCCATGA 57.541 52.632 0.00 0.00 32.09 3.07
190 191 1.293924 GGCAACGATGACTCCATGAG 58.706 55.000 0.00 0.00 32.09 2.90
191 192 1.293924 GCAACGATGACTCCATGAGG 58.706 55.000 0.00 0.00 33.35 3.86
192 193 1.945387 CAACGATGACTCCATGAGGG 58.055 55.000 0.00 0.00 33.35 4.30
193 194 0.179000 AACGATGACTCCATGAGGGC 59.821 55.000 0.00 0.00 36.21 5.19
194 195 1.300465 CGATGACTCCATGAGGGCG 60.300 63.158 0.00 0.00 36.21 6.13
195 196 1.070445 GATGACTCCATGAGGGCGG 59.930 63.158 0.00 0.00 36.21 6.13
196 197 1.690219 GATGACTCCATGAGGGCGGT 61.690 60.000 0.00 0.00 36.21 5.68
197 198 1.274703 ATGACTCCATGAGGGCGGTT 61.275 55.000 0.00 0.00 36.21 4.44
198 199 1.299976 GACTCCATGAGGGCGGTTT 59.700 57.895 0.00 0.00 36.21 3.27
199 200 0.322546 GACTCCATGAGGGCGGTTTT 60.323 55.000 0.00 0.00 36.21 2.43
200 201 0.322546 ACTCCATGAGGGCGGTTTTC 60.323 55.000 0.00 0.00 36.21 2.29
201 202 0.322456 CTCCATGAGGGCGGTTTTCA 60.322 55.000 0.00 0.00 36.21 2.69
202 203 0.322456 TCCATGAGGGCGGTTTTCAG 60.322 55.000 0.00 0.00 36.21 3.02
203 204 1.508088 CATGAGGGCGGTTTTCAGC 59.492 57.895 0.00 0.00 40.15 4.26
205 206 3.431725 GAGGGCGGTTTTCAGCGG 61.432 66.667 0.00 0.00 44.36 5.52
211 212 4.038080 GGTTTTCAGCGGGCGGTG 62.038 66.667 0.00 0.00 44.11 4.94
212 213 4.700365 GTTTTCAGCGGGCGGTGC 62.700 66.667 0.00 0.00 42.66 5.01
213 214 4.947147 TTTTCAGCGGGCGGTGCT 62.947 61.111 0.00 0.00 45.31 4.40
224 225 3.133014 CGGTGCTCTCCGGATGAT 58.867 61.111 3.57 0.00 45.88 2.45
225 226 1.300465 CGGTGCTCTCCGGATGATG 60.300 63.158 3.57 0.00 45.88 3.07
226 227 1.596477 GGTGCTCTCCGGATGATGC 60.596 63.158 3.57 7.90 0.00 3.91
227 228 1.953138 GTGCTCTCCGGATGATGCG 60.953 63.158 3.57 0.00 0.00 4.73
228 229 3.040763 GCTCTCCGGATGATGCGC 61.041 66.667 3.57 0.00 0.00 6.09
229 230 2.733301 CTCTCCGGATGATGCGCT 59.267 61.111 3.57 0.00 0.00 5.92
230 231 1.664017 CTCTCCGGATGATGCGCTG 60.664 63.158 3.57 0.00 0.00 5.18
231 232 2.664185 CTCCGGATGATGCGCTGG 60.664 66.667 3.57 0.00 0.00 4.85
232 233 3.153781 TCCGGATGATGCGCTGGA 61.154 61.111 9.73 1.49 37.23 3.86
233 234 2.969238 CCGGATGATGCGCTGGAC 60.969 66.667 9.73 0.00 32.05 4.02
234 235 2.107750 CGGATGATGCGCTGGACT 59.892 61.111 9.73 0.00 0.00 3.85
235 236 1.363807 CGGATGATGCGCTGGACTA 59.636 57.895 9.73 0.00 0.00 2.59
236 237 0.665670 CGGATGATGCGCTGGACTAG 60.666 60.000 9.73 0.00 0.00 2.57
237 238 0.320247 GGATGATGCGCTGGACTAGG 60.320 60.000 9.73 0.00 0.00 3.02
238 239 0.390860 GATGATGCGCTGGACTAGGT 59.609 55.000 9.73 0.00 0.00 3.08
239 240 0.390860 ATGATGCGCTGGACTAGGTC 59.609 55.000 9.73 0.00 0.00 3.85
240 241 1.299468 GATGCGCTGGACTAGGTCG 60.299 63.158 9.73 0.00 32.65 4.79
241 242 2.685387 GATGCGCTGGACTAGGTCGG 62.685 65.000 9.73 0.00 32.65 4.79
242 243 3.450115 GCGCTGGACTAGGTCGGT 61.450 66.667 0.00 0.00 32.65 4.69
243 244 2.490217 CGCTGGACTAGGTCGGTG 59.510 66.667 0.00 0.00 32.65 4.94
244 245 2.184579 GCTGGACTAGGTCGGTGC 59.815 66.667 0.00 0.00 32.65 5.01
245 246 2.490217 CTGGACTAGGTCGGTGCG 59.510 66.667 0.00 0.00 32.65 5.34
246 247 2.034532 TGGACTAGGTCGGTGCGA 59.965 61.111 0.00 0.00 32.65 5.10
247 248 1.994507 CTGGACTAGGTCGGTGCGAG 61.995 65.000 0.00 0.00 36.23 5.03
248 249 2.772691 GGACTAGGTCGGTGCGAGG 61.773 68.421 0.00 0.00 36.23 4.63
249 250 3.412879 GACTAGGTCGGTGCGAGGC 62.413 68.421 0.00 0.00 36.23 4.70
250 251 3.141488 CTAGGTCGGTGCGAGGCT 61.141 66.667 0.00 0.00 36.23 4.58
251 252 2.678934 TAGGTCGGTGCGAGGCTT 60.679 61.111 0.00 0.00 36.23 4.35
252 253 2.890847 CTAGGTCGGTGCGAGGCTTG 62.891 65.000 0.00 0.00 36.23 4.01
255 256 4.617520 TCGGTGCGAGGCTTGCAA 62.618 61.111 30.14 13.22 45.23 4.08
256 257 4.389576 CGGTGCGAGGCTTGCAAC 62.390 66.667 30.90 30.90 46.47 4.17
257 258 2.980233 GGTGCGAGGCTTGCAACT 60.980 61.111 32.74 0.00 46.43 3.16
258 259 2.555547 GGTGCGAGGCTTGCAACTT 61.556 57.895 32.74 0.00 46.43 2.66
259 260 1.360192 GTGCGAGGCTTGCAACTTT 59.640 52.632 30.14 0.00 45.23 2.66
260 261 0.661483 GTGCGAGGCTTGCAACTTTC 60.661 55.000 30.14 14.26 45.23 2.62
261 262 0.819259 TGCGAGGCTTGCAACTTTCT 60.819 50.000 26.78 0.00 39.87 2.52
262 263 0.312102 GCGAGGCTTGCAACTTTCTT 59.688 50.000 21.86 0.00 0.00 2.52
263 264 1.664302 GCGAGGCTTGCAACTTTCTTC 60.664 52.381 21.86 0.00 0.00 2.87
264 265 1.876156 CGAGGCTTGCAACTTTCTTCT 59.124 47.619 0.00 0.00 0.00 2.85
265 266 2.350197 CGAGGCTTGCAACTTTCTTCTG 60.350 50.000 0.00 0.00 0.00 3.02
266 267 2.620585 GAGGCTTGCAACTTTCTTCTGT 59.379 45.455 0.00 0.00 0.00 3.41
267 268 2.360165 AGGCTTGCAACTTTCTTCTGTG 59.640 45.455 0.00 0.00 0.00 3.66
268 269 2.358898 GGCTTGCAACTTTCTTCTGTGA 59.641 45.455 0.00 0.00 0.00 3.58
269 270 3.181487 GGCTTGCAACTTTCTTCTGTGAA 60.181 43.478 0.00 0.00 0.00 3.18
270 271 4.040376 GCTTGCAACTTTCTTCTGTGAAG 58.960 43.478 0.00 1.23 0.00 3.02
271 272 3.698029 TGCAACTTTCTTCTGTGAAGC 57.302 42.857 2.71 0.00 0.00 3.86
272 273 3.016031 TGCAACTTTCTTCTGTGAAGCA 58.984 40.909 2.71 0.00 0.00 3.91
273 274 3.633525 TGCAACTTTCTTCTGTGAAGCAT 59.366 39.130 2.71 0.00 0.00 3.79
274 275 4.098349 TGCAACTTTCTTCTGTGAAGCATT 59.902 37.500 2.71 0.00 0.00 3.56
275 276 5.045872 GCAACTTTCTTCTGTGAAGCATTT 58.954 37.500 2.71 0.00 0.00 2.32
276 277 5.174579 GCAACTTTCTTCTGTGAAGCATTTC 59.825 40.000 2.71 0.00 0.00 2.17
277 278 6.267817 CAACTTTCTTCTGTGAAGCATTTCA 58.732 36.000 2.71 0.00 40.92 2.69
278 279 6.069684 ACTTTCTTCTGTGAAGCATTTCAG 57.930 37.500 2.71 0.00 43.66 3.02
279 280 4.494350 TTCTTCTGTGAAGCATTTCAGC 57.506 40.909 2.71 0.00 43.66 4.26
280 281 3.479489 TCTTCTGTGAAGCATTTCAGCA 58.521 40.909 2.71 0.00 43.66 4.41
281 282 3.884693 TCTTCTGTGAAGCATTTCAGCAA 59.115 39.130 2.71 0.00 43.66 3.91
282 283 4.338964 TCTTCTGTGAAGCATTTCAGCAAA 59.661 37.500 2.71 0.00 43.66 3.68
283 284 4.652421 TCTGTGAAGCATTTCAGCAAAA 57.348 36.364 0.00 0.00 43.66 2.44
284 285 5.204409 TCTGTGAAGCATTTCAGCAAAAT 57.796 34.783 0.00 0.00 43.66 1.82
285 286 5.224888 TCTGTGAAGCATTTCAGCAAAATC 58.775 37.500 0.00 0.00 43.66 2.17
286 287 3.982701 TGTGAAGCATTTCAGCAAAATCG 59.017 39.130 0.00 0.00 43.66 3.34
287 288 3.365820 GTGAAGCATTTCAGCAAAATCGG 59.634 43.478 0.00 0.00 43.66 4.18
288 289 3.255395 TGAAGCATTTCAGCAAAATCGGA 59.745 39.130 0.00 0.00 38.37 4.55
289 290 3.498927 AGCATTTCAGCAAAATCGGAG 57.501 42.857 0.00 0.00 35.32 4.63
290 291 1.922545 GCATTTCAGCAAAATCGGAGC 59.077 47.619 0.00 0.00 35.32 4.70
291 292 2.416431 GCATTTCAGCAAAATCGGAGCT 60.416 45.455 0.00 0.00 35.32 4.09
294 295 3.595819 AGCAAAATCGGAGCTGCC 58.404 55.556 0.00 0.00 37.20 4.85
295 296 1.303561 AGCAAAATCGGAGCTGCCA 60.304 52.632 0.00 0.00 37.20 4.92
296 297 0.682209 AGCAAAATCGGAGCTGCCAT 60.682 50.000 0.00 0.00 37.20 4.40
297 298 0.526954 GCAAAATCGGAGCTGCCATG 60.527 55.000 0.00 0.00 35.94 3.66
298 299 0.813184 CAAAATCGGAGCTGCCATGT 59.187 50.000 0.00 0.00 35.94 3.21
299 300 1.098050 AAAATCGGAGCTGCCATGTC 58.902 50.000 0.00 0.00 35.94 3.06
300 301 0.749454 AAATCGGAGCTGCCATGTCC 60.749 55.000 0.00 0.00 35.94 4.02
301 302 1.630126 AATCGGAGCTGCCATGTCCT 61.630 55.000 0.00 0.00 35.94 3.85
302 303 2.037620 ATCGGAGCTGCCATGTCCTC 62.038 60.000 0.00 0.00 35.94 3.71
303 304 2.202987 GGAGCTGCCATGTCCTCG 60.203 66.667 0.00 0.00 36.34 4.63
304 305 2.725312 GGAGCTGCCATGTCCTCGA 61.725 63.158 0.00 0.00 36.34 4.04
305 306 1.520342 GAGCTGCCATGTCCTCGAC 60.520 63.158 0.00 0.00 0.00 4.20
306 307 2.887568 GCTGCCATGTCCTCGACG 60.888 66.667 0.00 0.00 34.95 5.12
307 308 2.887568 CTGCCATGTCCTCGACGC 60.888 66.667 0.00 0.00 34.95 5.19
308 309 3.362399 CTGCCATGTCCTCGACGCT 62.362 63.158 0.00 0.00 34.95 5.07
309 310 2.125512 GCCATGTCCTCGACGCTT 60.126 61.111 0.00 0.00 34.95 4.68
310 311 2.167861 GCCATGTCCTCGACGCTTC 61.168 63.158 0.00 0.00 34.95 3.86
312 313 1.874019 CATGTCCTCGACGCTTCGG 60.874 63.158 13.04 3.61 45.90 4.30
313 314 2.341101 ATGTCCTCGACGCTTCGGT 61.341 57.895 13.04 0.00 45.90 4.69
314 315 2.202453 GTCCTCGACGCTTCGGTC 60.202 66.667 13.04 0.00 45.90 4.79
320 321 2.254651 GACGCTTCGGTCGACTGT 59.745 61.111 23.27 4.10 0.00 3.55
321 322 1.371389 GACGCTTCGGTCGACTGTT 60.371 57.895 23.27 4.80 0.00 3.16
322 323 0.938168 GACGCTTCGGTCGACTGTTT 60.938 55.000 23.27 5.14 0.00 2.83
323 324 1.213094 ACGCTTCGGTCGACTGTTTG 61.213 55.000 23.27 14.96 0.00 2.93
324 325 1.860078 GCTTCGGTCGACTGTTTGG 59.140 57.895 23.27 12.71 0.00 3.28
325 326 1.860078 CTTCGGTCGACTGTTTGGC 59.140 57.895 23.27 0.00 0.00 4.52
326 327 0.600255 CTTCGGTCGACTGTTTGGCT 60.600 55.000 23.27 0.00 0.00 4.75
327 328 0.179067 TTCGGTCGACTGTTTGGCTT 60.179 50.000 23.27 0.00 0.00 4.35
328 329 0.878523 TCGGTCGACTGTTTGGCTTG 60.879 55.000 23.27 0.00 0.00 4.01
329 330 1.157870 CGGTCGACTGTTTGGCTTGT 61.158 55.000 16.54 0.00 0.00 3.16
330 331 0.586802 GGTCGACTGTTTGGCTTGTC 59.413 55.000 16.46 0.00 0.00 3.18
331 332 1.583054 GTCGACTGTTTGGCTTGTCT 58.417 50.000 8.70 0.00 0.00 3.41
332 333 1.261619 GTCGACTGTTTGGCTTGTCTG 59.738 52.381 8.70 0.00 0.00 3.51
333 334 1.134521 TCGACTGTTTGGCTTGTCTGT 60.135 47.619 0.00 0.00 0.00 3.41
334 335 1.003545 CGACTGTTTGGCTTGTCTGTG 60.004 52.381 0.00 0.00 0.00 3.66
335 336 1.334869 GACTGTTTGGCTTGTCTGTGG 59.665 52.381 0.00 0.00 0.00 4.17
336 337 0.031178 CTGTTTGGCTTGTCTGTGGC 59.969 55.000 0.00 0.00 0.00 5.01
337 338 1.363807 GTTTGGCTTGTCTGTGGCC 59.636 57.895 0.00 0.00 45.45 5.36
340 341 2.674380 GGCTTGTCTGTGGCCAGG 60.674 66.667 5.11 1.60 44.69 4.45
341 342 2.113986 GCTTGTCTGTGGCCAGGT 59.886 61.111 5.11 0.00 39.31 4.00
342 343 1.968540 GCTTGTCTGTGGCCAGGTC 60.969 63.158 5.11 0.22 39.31 3.85
343 344 1.669115 CTTGTCTGTGGCCAGGTCG 60.669 63.158 5.11 0.00 39.31 4.79
344 345 3.177194 TTGTCTGTGGCCAGGTCGG 62.177 63.158 5.11 0.00 39.31 4.79
353 354 2.666190 CCAGGTCGGCTGTGTGTG 60.666 66.667 0.00 0.00 0.00 3.82
354 355 3.349006 CAGGTCGGCTGTGTGTGC 61.349 66.667 0.00 0.00 0.00 4.57
355 356 4.626081 AGGTCGGCTGTGTGTGCC 62.626 66.667 0.00 0.00 46.42 5.01
372 373 4.954933 CCCGTGGGGTTGTATCTG 57.045 61.111 0.00 0.00 38.25 2.90
373 374 1.223487 CCCGTGGGGTTGTATCTGG 59.777 63.158 0.00 0.00 38.25 3.86
374 375 1.223487 CCGTGGGGTTGTATCTGGG 59.777 63.158 0.00 0.00 0.00 4.45
375 376 1.559065 CCGTGGGGTTGTATCTGGGT 61.559 60.000 0.00 0.00 0.00 4.51
376 377 0.326927 CGTGGGGTTGTATCTGGGTT 59.673 55.000 0.00 0.00 0.00 4.11
377 378 1.271707 CGTGGGGTTGTATCTGGGTTT 60.272 52.381 0.00 0.00 0.00 3.27
378 379 2.816337 CGTGGGGTTGTATCTGGGTTTT 60.816 50.000 0.00 0.00 0.00 2.43
379 380 2.823747 GTGGGGTTGTATCTGGGTTTTC 59.176 50.000 0.00 0.00 0.00 2.29
380 381 2.089201 GGGGTTGTATCTGGGTTTTCG 58.911 52.381 0.00 0.00 0.00 3.46
381 382 1.471287 GGGTTGTATCTGGGTTTTCGC 59.529 52.381 0.00 0.00 0.00 4.70
382 383 1.471287 GGTTGTATCTGGGTTTTCGCC 59.529 52.381 0.00 0.00 0.00 5.54
390 391 3.898380 GGGTTTTCGCCCGATTTTT 57.102 47.368 0.00 0.00 39.17 1.94
391 392 1.705256 GGGTTTTCGCCCGATTTTTC 58.295 50.000 0.00 0.00 39.17 2.29
392 393 1.271379 GGGTTTTCGCCCGATTTTTCT 59.729 47.619 0.00 0.00 39.17 2.52
393 394 2.288579 GGGTTTTCGCCCGATTTTTCTT 60.289 45.455 0.00 0.00 39.17 2.52
394 395 3.386486 GGTTTTCGCCCGATTTTTCTTT 58.614 40.909 0.00 0.00 0.00 2.52
395 396 4.548494 GGTTTTCGCCCGATTTTTCTTTA 58.452 39.130 0.00 0.00 0.00 1.85
396 397 4.983538 GGTTTTCGCCCGATTTTTCTTTAA 59.016 37.500 0.00 0.00 0.00 1.52
397 398 5.636121 GGTTTTCGCCCGATTTTTCTTTAAT 59.364 36.000 0.00 0.00 0.00 1.40
398 399 6.146510 GGTTTTCGCCCGATTTTTCTTTAATT 59.853 34.615 0.00 0.00 0.00 1.40
399 400 7.328982 GGTTTTCGCCCGATTTTTCTTTAATTA 59.671 33.333 0.00 0.00 0.00 1.40
400 401 8.701540 GTTTTCGCCCGATTTTTCTTTAATTAA 58.298 29.630 0.00 0.00 0.00 1.40
401 402 7.800015 TTCGCCCGATTTTTCTTTAATTAAC 57.200 32.000 0.00 0.00 0.00 2.01
402 403 6.324042 TCGCCCGATTTTTCTTTAATTAACC 58.676 36.000 0.00 0.00 0.00 2.85
403 404 5.228427 CGCCCGATTTTTCTTTAATTAACCG 59.772 40.000 0.00 0.00 0.00 4.44
404 405 5.517411 GCCCGATTTTTCTTTAATTAACCGG 59.483 40.000 0.00 0.00 0.00 5.28
405 406 6.037726 CCCGATTTTTCTTTAATTAACCGGG 58.962 40.000 6.32 0.00 44.40 5.73
406 407 5.517411 CCGATTTTTCTTTAATTAACCGGGC 59.483 40.000 6.32 0.00 0.00 6.13
407 408 6.094061 CGATTTTTCTTTAATTAACCGGGCA 58.906 36.000 6.32 0.00 0.00 5.36
408 409 6.586844 CGATTTTTCTTTAATTAACCGGGCAA 59.413 34.615 6.32 0.00 0.00 4.52
409 410 7.116519 CGATTTTTCTTTAATTAACCGGGCAAA 59.883 33.333 6.32 0.00 0.00 3.68
410 411 8.856153 ATTTTTCTTTAATTAACCGGGCAAAT 57.144 26.923 6.32 0.00 0.00 2.32
411 412 7.892778 TTTTCTTTAATTAACCGGGCAAATC 57.107 32.000 6.32 0.00 0.00 2.17
412 413 6.844097 TTCTTTAATTAACCGGGCAAATCT 57.156 33.333 6.32 0.00 0.00 2.40
413 414 6.445357 TCTTTAATTAACCGGGCAAATCTC 57.555 37.500 6.32 0.00 0.00 2.75
414 415 6.184789 TCTTTAATTAACCGGGCAAATCTCT 58.815 36.000 6.32 0.00 0.00 3.10
415 416 6.661805 TCTTTAATTAACCGGGCAAATCTCTT 59.338 34.615 6.32 0.00 0.00 2.85
416 417 4.983671 AATTAACCGGGCAAATCTCTTC 57.016 40.909 6.32 0.00 0.00 2.87
417 418 3.713826 TTAACCGGGCAAATCTCTTCT 57.286 42.857 6.32 0.00 0.00 2.85
418 419 2.586648 AACCGGGCAAATCTCTTCTT 57.413 45.000 6.32 0.00 0.00 2.52
419 420 2.586648 ACCGGGCAAATCTCTTCTTT 57.413 45.000 6.32 0.00 0.00 2.52
420 421 2.876581 ACCGGGCAAATCTCTTCTTTT 58.123 42.857 6.32 0.00 0.00 2.27
421 422 3.230976 ACCGGGCAAATCTCTTCTTTTT 58.769 40.909 6.32 0.00 0.00 1.94
422 423 4.403734 ACCGGGCAAATCTCTTCTTTTTA 58.596 39.130 6.32 0.00 0.00 1.52
423 424 4.830600 ACCGGGCAAATCTCTTCTTTTTAA 59.169 37.500 6.32 0.00 0.00 1.52
424 425 5.480422 ACCGGGCAAATCTCTTCTTTTTAAT 59.520 36.000 6.32 0.00 0.00 1.40
425 426 6.036470 CCGGGCAAATCTCTTCTTTTTAATC 58.964 40.000 0.00 0.00 0.00 1.75
426 427 6.350110 CCGGGCAAATCTCTTCTTTTTAATCA 60.350 38.462 0.00 0.00 0.00 2.57
427 428 7.090173 CGGGCAAATCTCTTCTTTTTAATCAA 58.910 34.615 0.00 0.00 0.00 2.57
428 429 7.761249 CGGGCAAATCTCTTCTTTTTAATCAAT 59.239 33.333 0.00 0.00 0.00 2.57
429 430 8.876790 GGGCAAATCTCTTCTTTTTAATCAATG 58.123 33.333 0.00 0.00 0.00 2.82
430 431 9.643693 GGCAAATCTCTTCTTTTTAATCAATGA 57.356 29.630 0.00 0.00 0.00 2.57
438 439 9.775854 TCTTCTTTTTAATCAATGAAAATGGCA 57.224 25.926 0.00 0.00 0.00 4.92
448 449 6.670233 TCAATGAAAATGGCAAATCTTTTGC 58.330 32.000 14.88 14.88 44.22 3.68
460 461 7.656707 GCAAATCTTTTGCCTCTTATCAAAA 57.343 32.000 12.74 0.00 39.13 2.44
461 462 8.086851 GCAAATCTTTTGCCTCTTATCAAAAA 57.913 30.769 12.74 0.00 40.36 1.94
487 488 8.877808 AATCAGCTCAAGTTTTTAAGGAAAAG 57.122 30.769 0.00 0.00 37.88 2.27
491 492 5.685954 GCTCAAGTTTTTAAGGAAAAGGACG 59.314 40.000 0.00 0.00 37.88 4.79
499 500 3.518992 AAGGAAAAGGACGGGAATTGA 57.481 42.857 0.00 0.00 0.00 2.57
565 566 0.942410 CGGTCGACACGTGGAACAAT 60.942 55.000 21.57 0.00 44.16 2.71
567 568 1.723003 GGTCGACACGTGGAACAATAC 59.277 52.381 21.57 7.59 44.16 1.89
569 570 2.407361 GTCGACACGTGGAACAATACAG 59.593 50.000 21.57 0.00 44.16 2.74
588 589 1.865788 GCAACAGAAATGGCAGGCGA 61.866 55.000 0.00 0.00 0.00 5.54
589 590 0.597568 CAACAGAAATGGCAGGCGAA 59.402 50.000 0.00 0.00 0.00 4.70
592 593 0.813184 CAGAAATGGCAGGCGAACAT 59.187 50.000 0.00 0.00 0.00 2.71
600 610 1.296392 CAGGCGAACATGGGACTCA 59.704 57.895 0.00 0.00 0.00 3.41
634 644 9.685828 GCATGGTTAATTAGTGAAAAAGTTACA 57.314 29.630 0.00 0.00 0.00 2.41
652 902 2.489971 ACAGTACAACACCATTCACCG 58.510 47.619 0.00 0.00 0.00 4.94
655 905 3.125146 CAGTACAACACCATTCACCGATG 59.875 47.826 0.00 0.00 0.00 3.84
678 928 3.241701 GGTTACCAACATGCATTTCACG 58.758 45.455 0.00 0.00 0.00 4.35
690 940 1.078709 ATTTCACGCACACCATCGAG 58.921 50.000 0.00 0.00 0.00 4.04
696 946 0.803768 CGCACACCATCGAGAGGAAG 60.804 60.000 13.15 7.73 0.00 3.46
724 1369 0.884704 TGAGTTTGCCCGCAAGAGTC 60.885 55.000 1.90 7.18 43.02 3.36
737 1382 4.421948 CGCAAGAGTCCTCGTTATTACTT 58.578 43.478 0.00 0.00 43.02 2.24
740 1385 4.388378 AGAGTCCTCGTTATTACTTGCC 57.612 45.455 0.00 0.00 34.09 4.52
751 1396 0.847373 TTACTTGCCCACTTGTCCCA 59.153 50.000 0.00 0.00 0.00 4.37
752 1397 0.847373 TACTTGCCCACTTGTCCCAA 59.153 50.000 0.00 0.00 0.00 4.12
798 1454 4.641645 CCAAGCCACGTGCCAGGA 62.642 66.667 10.91 0.00 42.71 3.86
808 1464 2.447572 TGCCAGGACAGGGACACA 60.448 61.111 0.00 0.00 0.00 3.72
819 1475 2.184533 CAGGGACACATACACCACCTA 58.815 52.381 0.00 0.00 0.00 3.08
914 1577 3.574284 TCTTGCAATCCAAATCAACCG 57.426 42.857 0.00 0.00 31.94 4.44
949 1612 2.500619 CGCTTCTCGCTTTCAGAAAG 57.499 50.000 17.46 17.46 41.46 2.62
956 1624 2.999355 CTCGCTTTCAGAAAGAGGAAGG 59.001 50.000 24.70 10.09 41.02 3.46
1109 1781 8.959705 AGTGGCTACTCTTTATAATTTGTACC 57.040 34.615 0.00 0.00 28.79 3.34
1110 1782 8.769359 AGTGGCTACTCTTTATAATTTGTACCT 58.231 33.333 0.00 0.00 28.79 3.08
1168 1845 6.326323 TGATCTGGTTATTACTGCTGTGGATA 59.674 38.462 6.48 2.49 0.00 2.59
1172 1849 6.054941 TGGTTATTACTGCTGTGGATATGTG 58.945 40.000 6.48 0.00 0.00 3.21
1197 1874 0.908198 AGGTGGAGTTCTGGATCTGC 59.092 55.000 0.00 0.00 0.00 4.26
1210 1887 3.072476 TCTGCCTCTTGCTGACCC 58.928 61.111 0.00 0.00 42.28 4.46
1340 2018 1.197430 ACAGGGGCTGTCTTCAGAGG 61.197 60.000 0.00 0.00 41.21 3.69
1440 2121 6.112734 GGTATTGTTGACCTGTGATGTGATA 58.887 40.000 0.00 0.00 33.86 2.15
1444 2125 6.353404 TGTTGACCTGTGATGTGATAAGTA 57.647 37.500 0.00 0.00 0.00 2.24
1447 2128 6.544928 TGACCTGTGATGTGATAAGTATGT 57.455 37.500 0.00 0.00 0.00 2.29
1450 2131 8.536175 TGACCTGTGATGTGATAAGTATGTTTA 58.464 33.333 0.00 0.00 0.00 2.01
1495 2176 3.512680 ACGTCGAAATGATCCTTCTGAC 58.487 45.455 0.00 13.47 0.00 3.51
1516 2197 2.253603 GCAATCGAAGTTGAATGGCAC 58.746 47.619 2.94 0.00 0.00 5.01
1518 2199 3.126858 GCAATCGAAGTTGAATGGCACTA 59.873 43.478 2.94 0.00 0.00 2.74
1519 2200 4.728882 GCAATCGAAGTTGAATGGCACTAG 60.729 45.833 2.94 0.00 0.00 2.57
1536 2217 4.380531 CACTAGTGCTGAAAGTTTCTCCA 58.619 43.478 16.33 10.19 35.30 3.86
1537 2218 4.816385 CACTAGTGCTGAAAGTTTCTCCAA 59.184 41.667 16.33 0.00 35.30 3.53
1577 2258 3.214328 TGAAGCCAGTTTCAAGAGGAAC 58.786 45.455 0.00 0.00 34.32 3.62
1580 2261 2.039084 AGCCAGTTTCAAGAGGAACGAT 59.961 45.455 0.00 0.00 34.56 3.73
1588 2269 2.093658 TCAAGAGGAACGATGGCCTTAC 60.094 50.000 3.32 0.00 33.84 2.34
1624 2305 7.834881 ATATCACCGGAAGTCATAGAACTTA 57.165 36.000 9.46 0.00 39.55 2.24
1625 2306 6.732896 ATCACCGGAAGTCATAGAACTTAT 57.267 37.500 9.46 0.00 39.55 1.73
1629 2310 6.594159 CACCGGAAGTCATAGAACTTATGTTT 59.406 38.462 9.46 0.00 39.55 2.83
1634 2315 9.937175 GGAAGTCATAGAACTTATGTTTAATGC 57.063 33.333 10.01 7.24 39.55 3.56
1643 2324 9.066892 AGAACTTATGTTTAATGCTCAGTTTGA 57.933 29.630 0.00 0.00 36.39 2.69
1790 2471 1.075482 AGTGGGTGGGAGTGCATTG 59.925 57.895 0.00 0.00 0.00 2.82
1791 2472 1.978617 GTGGGTGGGAGTGCATTGG 60.979 63.158 0.00 0.00 0.00 3.16
1792 2473 2.362889 GGGTGGGAGTGCATTGGG 60.363 66.667 0.00 0.00 0.00 4.12
1793 2474 2.763215 GGTGGGAGTGCATTGGGA 59.237 61.111 0.00 0.00 0.00 4.37
1794 2475 1.379044 GGTGGGAGTGCATTGGGAG 60.379 63.158 0.00 0.00 0.00 4.30
1795 2476 1.380302 GTGGGAGTGCATTGGGAGT 59.620 57.895 0.00 0.00 0.00 3.85
1796 2477 0.962356 GTGGGAGTGCATTGGGAGTG 60.962 60.000 0.00 0.00 0.00 3.51
1797 2478 2.048603 GGGAGTGCATTGGGAGTGC 61.049 63.158 0.00 0.00 42.81 4.40
1802 2483 2.951269 TGCATTGGGAGTGCAGAAG 58.049 52.632 0.00 0.00 46.76 2.85
1803 2484 0.609957 TGCATTGGGAGTGCAGAAGG 60.610 55.000 0.00 0.00 46.76 3.46
1804 2485 0.610232 GCATTGGGAGTGCAGAAGGT 60.610 55.000 0.00 0.00 42.08 3.50
1805 2486 1.171308 CATTGGGAGTGCAGAAGGTG 58.829 55.000 0.00 0.00 0.00 4.00
1806 2487 0.773644 ATTGGGAGTGCAGAAGGTGT 59.226 50.000 0.00 0.00 0.00 4.16
1807 2488 0.550914 TTGGGAGTGCAGAAGGTGTT 59.449 50.000 0.00 0.00 0.00 3.32
1808 2489 0.179020 TGGGAGTGCAGAAGGTGTTG 60.179 55.000 0.00 0.00 0.00 3.33
1809 2490 0.179018 GGGAGTGCAGAAGGTGTTGT 60.179 55.000 0.00 0.00 0.00 3.32
1810 2491 1.071699 GGGAGTGCAGAAGGTGTTGTA 59.928 52.381 0.00 0.00 0.00 2.41
1811 2492 2.143925 GGAGTGCAGAAGGTGTTGTAC 58.856 52.381 0.00 0.00 0.00 2.90
1812 2493 2.484770 GGAGTGCAGAAGGTGTTGTACA 60.485 50.000 0.00 0.00 33.13 2.90
1813 2494 3.202906 GAGTGCAGAAGGTGTTGTACAA 58.797 45.455 3.59 3.59 33.13 2.41
1814 2495 3.616219 AGTGCAGAAGGTGTTGTACAAA 58.384 40.909 10.51 0.00 33.13 2.83
1815 2496 4.207165 AGTGCAGAAGGTGTTGTACAAAT 58.793 39.130 10.51 0.00 33.13 2.32
1816 2497 4.036734 AGTGCAGAAGGTGTTGTACAAATG 59.963 41.667 10.51 2.52 33.13 2.32
1817 2498 3.951037 TGCAGAAGGTGTTGTACAAATGT 59.049 39.130 10.51 0.00 0.00 2.71
1818 2499 5.008217 GTGCAGAAGGTGTTGTACAAATGTA 59.992 40.000 10.51 0.00 31.37 2.29
1819 2500 5.767665 TGCAGAAGGTGTTGTACAAATGTAT 59.232 36.000 10.51 0.00 32.54 2.29
1820 2501 6.086222 GCAGAAGGTGTTGTACAAATGTATG 58.914 40.000 10.51 5.18 32.54 2.39
1821 2502 6.611381 CAGAAGGTGTTGTACAAATGTATGG 58.389 40.000 10.51 0.00 32.54 2.74
1822 2503 5.183140 AGAAGGTGTTGTACAAATGTATGGC 59.817 40.000 10.51 0.00 32.54 4.40
1823 2504 3.761752 AGGTGTTGTACAAATGTATGGCC 59.238 43.478 10.51 0.00 32.54 5.36
1824 2505 3.761752 GGTGTTGTACAAATGTATGGCCT 59.238 43.478 10.51 0.00 32.54 5.19
1825 2506 4.380444 GGTGTTGTACAAATGTATGGCCTG 60.380 45.833 10.51 0.00 32.54 4.85
1826 2507 3.192422 TGTTGTACAAATGTATGGCCTGC 59.808 43.478 10.51 0.00 32.54 4.85
1827 2508 3.364460 TGTACAAATGTATGGCCTGCT 57.636 42.857 3.32 0.00 32.54 4.24
1828 2509 3.278574 TGTACAAATGTATGGCCTGCTC 58.721 45.455 3.32 0.00 32.54 4.26
1829 2510 2.512692 ACAAATGTATGGCCTGCTCA 57.487 45.000 3.32 0.00 0.00 4.26
1830 2511 2.094675 ACAAATGTATGGCCTGCTCAC 58.905 47.619 3.32 0.00 0.00 3.51
1831 2512 1.064505 CAAATGTATGGCCTGCTCACG 59.935 52.381 3.32 0.00 0.00 4.35
1832 2513 0.253044 AATGTATGGCCTGCTCACGT 59.747 50.000 3.32 0.00 0.00 4.49
1833 2514 0.462581 ATGTATGGCCTGCTCACGTG 60.463 55.000 9.94 9.94 0.00 4.49
1834 2515 1.815421 GTATGGCCTGCTCACGTGG 60.815 63.158 17.00 7.71 0.00 4.94
1835 2516 2.290287 TATGGCCTGCTCACGTGGT 61.290 57.895 17.00 0.00 0.00 4.16
1836 2517 0.973496 TATGGCCTGCTCACGTGGTA 60.973 55.000 17.00 5.20 0.00 3.25
1837 2518 1.626356 ATGGCCTGCTCACGTGGTAT 61.626 55.000 17.00 0.00 0.00 2.73
1838 2519 1.815421 GGCCTGCTCACGTGGTATG 60.815 63.158 17.00 5.13 0.00 2.39
1839 2520 2.464459 GCCTGCTCACGTGGTATGC 61.464 63.158 17.00 14.96 0.00 3.14
1840 2521 1.815421 CCTGCTCACGTGGTATGCC 60.815 63.158 17.00 0.00 0.00 4.40
1841 2522 1.079197 CTGCTCACGTGGTATGCCA 60.079 57.895 17.00 0.00 43.73 4.92
1849 2530 2.286045 TGGTATGCCAGCCTGGGA 60.286 61.111 13.78 10.90 43.78 4.37
1850 2531 2.377810 TGGTATGCCAGCCTGGGAG 61.378 63.158 13.78 0.00 42.59 4.30
1851 2532 2.512896 GTATGCCAGCCTGGGAGG 59.487 66.667 13.78 0.00 42.59 4.30
1873 2554 3.324246 ACCTATCAGTGGGTGGGAG 57.676 57.895 5.98 0.00 37.87 4.30
1874 2555 0.417841 ACCTATCAGTGGGTGGGAGT 59.582 55.000 5.98 0.00 37.87 3.85
1875 2556 0.833287 CCTATCAGTGGGTGGGAGTG 59.167 60.000 0.00 0.00 0.00 3.51
1876 2557 0.179000 CTATCAGTGGGTGGGAGTGC 59.821 60.000 0.00 0.00 0.00 4.40
1877 2558 0.546507 TATCAGTGGGTGGGAGTGCA 60.547 55.000 0.00 0.00 0.00 4.57
1878 2559 1.210204 ATCAGTGGGTGGGAGTGCAT 61.210 55.000 0.00 0.00 0.00 3.96
1879 2560 1.075482 CAGTGGGTGGGAGTGCATT 59.925 57.895 0.00 0.00 0.00 3.56
1899 2580 0.108585 GGGAGTGCAGAAGGTGTTGA 59.891 55.000 0.00 0.00 0.00 3.18
1903 2584 1.486310 AGTGCAGAAGGTGTTGAGTGA 59.514 47.619 0.00 0.00 0.00 3.41
1912 2593 2.634940 AGGTGTTGAGTGACACTAGCAT 59.365 45.455 8.41 0.00 47.00 3.79
1920 2601 3.480470 AGTGACACTAGCATGCTGTTTT 58.520 40.909 30.42 11.79 0.00 2.43
1921 2602 3.885297 AGTGACACTAGCATGCTGTTTTT 59.115 39.130 30.42 10.29 0.00 1.94
1987 2668 8.057536 ACGCACAAAAACCCTCAAATATAATA 57.942 30.769 0.00 0.00 0.00 0.98
2011 2692 2.403132 ATAGCTTCGGCAGATGGGGC 62.403 60.000 0.00 0.00 44.74 5.80
2075 2756 3.743269 CGGTGGTGTTTGGTTCTCTAGTT 60.743 47.826 0.00 0.00 0.00 2.24
2079 2760 5.927115 GTGGTGTTTGGTTCTCTAGTTCTAG 59.073 44.000 0.83 0.83 0.00 2.43
2104 2804 8.687242 AGGACTTTTTGAAAAAGACTCTTAAGG 58.313 33.333 30.55 7.27 0.00 2.69
2136 2837 8.589701 TTCCAAGAACTTTTAGAAAAAGTCCT 57.410 30.769 15.88 7.98 39.36 3.85
2164 2868 2.814336 GACCTCTGTTTGGTTTGCTAGG 59.186 50.000 0.00 0.00 38.03 3.02
2165 2869 2.441750 ACCTCTGTTTGGTTTGCTAGGA 59.558 45.455 0.00 0.00 33.34 2.94
2167 2871 4.082125 CCTCTGTTTGGTTTGCTAGGAAT 58.918 43.478 0.00 0.00 0.00 3.01
2201 2905 7.847096 ACTCTTTTTAGTCCCAACACAAAAAT 58.153 30.769 0.00 0.00 34.16 1.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.575922 CAACCACACGCATCACCAG 59.424 57.895 0.00 0.00 0.00 4.00
2 3 2.953821 CCAACCACACGCATCACC 59.046 61.111 0.00 0.00 0.00 4.02
3 4 2.255252 GCCAACCACACGCATCAC 59.745 61.111 0.00 0.00 0.00 3.06
4 5 3.353029 CGCCAACCACACGCATCA 61.353 61.111 0.00 0.00 0.00 3.07
5 6 2.903547 AACGCCAACCACACGCATC 61.904 57.895 0.00 0.00 0.00 3.91
6 7 2.904866 AACGCCAACCACACGCAT 60.905 55.556 0.00 0.00 0.00 4.73
7 8 3.882013 CAACGCCAACCACACGCA 61.882 61.111 0.00 0.00 0.00 5.24
9 10 4.954680 CGCAACGCCAACCACACG 62.955 66.667 0.00 0.00 0.00 4.49
10 11 3.578272 TCGCAACGCCAACCACAC 61.578 61.111 0.00 0.00 0.00 3.82
11 12 3.578272 GTCGCAACGCCAACCACA 61.578 61.111 0.00 0.00 0.00 4.17
12 13 3.236618 GAGTCGCAACGCCAACCAC 62.237 63.158 0.00 0.00 0.00 4.16
13 14 2.970324 GAGTCGCAACGCCAACCA 60.970 61.111 0.00 0.00 0.00 3.67
14 15 4.072088 CGAGTCGCAACGCCAACC 62.072 66.667 0.00 0.00 0.00 3.77
15 16 3.335534 ACGAGTCGCAACGCCAAC 61.336 61.111 13.59 0.00 0.00 3.77
16 17 3.334751 CACGAGTCGCAACGCCAA 61.335 61.111 13.59 0.00 0.00 4.52
17 18 4.578898 ACACGAGTCGCAACGCCA 62.579 61.111 13.59 0.00 0.00 5.69
18 19 4.059459 CACACGAGTCGCAACGCC 62.059 66.667 13.59 0.00 0.00 5.68
19 20 2.372690 ATCACACGAGTCGCAACGC 61.373 57.895 13.59 0.00 0.00 4.84
20 21 1.001745 TCATCACACGAGTCGCAACG 61.002 55.000 13.59 1.16 0.00 4.10
21 22 0.435008 GTCATCACACGAGTCGCAAC 59.565 55.000 13.59 0.00 0.00 4.17
22 23 1.001745 CGTCATCACACGAGTCGCAA 61.002 55.000 13.59 0.00 42.69 4.85
23 24 1.442017 CGTCATCACACGAGTCGCA 60.442 57.895 13.59 0.00 42.69 5.10
24 25 1.154282 TCGTCATCACACGAGTCGC 60.154 57.895 13.59 0.00 43.79 5.19
29 30 0.800012 TCATCGTCGTCATCACACGA 59.200 50.000 0.00 0.00 46.42 4.35
30 31 1.514402 CATCATCGTCGTCATCACACG 59.486 52.381 0.00 0.00 41.36 4.49
31 32 1.854743 CCATCATCGTCGTCATCACAC 59.145 52.381 0.00 0.00 0.00 3.82
32 33 1.802508 GCCATCATCGTCGTCATCACA 60.803 52.381 0.00 0.00 0.00 3.58
33 34 0.855349 GCCATCATCGTCGTCATCAC 59.145 55.000 0.00 0.00 0.00 3.06
34 35 0.594796 CGCCATCATCGTCGTCATCA 60.595 55.000 0.00 0.00 0.00 3.07
35 36 0.595053 ACGCCATCATCGTCGTCATC 60.595 55.000 0.00 0.00 34.84 2.92
36 37 0.871592 CACGCCATCATCGTCGTCAT 60.872 55.000 0.00 0.00 38.19 3.06
37 38 1.516169 CACGCCATCATCGTCGTCA 60.516 57.895 0.00 0.00 38.19 4.35
38 39 2.860628 GCACGCCATCATCGTCGTC 61.861 63.158 0.00 0.00 38.19 4.20
39 40 2.885644 GCACGCCATCATCGTCGT 60.886 61.111 0.00 0.00 38.19 4.34
40 41 3.976375 CGCACGCCATCATCGTCG 61.976 66.667 0.00 0.00 38.19 5.12
41 42 2.082437 CTTCGCACGCCATCATCGTC 62.082 60.000 0.00 0.00 38.19 4.20
42 43 2.125713 TTCGCACGCCATCATCGT 60.126 55.556 0.00 0.00 41.28 3.73
43 44 2.622629 CTTCGCACGCCATCATCG 59.377 61.111 0.00 0.00 0.00 3.84
44 45 0.875908 TAGCTTCGCACGCCATCATC 60.876 55.000 0.00 0.00 0.00 2.92
45 46 0.877649 CTAGCTTCGCACGCCATCAT 60.878 55.000 0.00 0.00 0.00 2.45
46 47 1.519234 CTAGCTTCGCACGCCATCA 60.519 57.895 0.00 0.00 0.00 3.07
47 48 2.240500 CCTAGCTTCGCACGCCATC 61.241 63.158 0.00 0.00 0.00 3.51
48 49 2.202932 CCTAGCTTCGCACGCCAT 60.203 61.111 0.00 0.00 0.00 4.40
49 50 3.642778 GACCTAGCTTCGCACGCCA 62.643 63.158 0.00 0.00 0.00 5.69
50 51 2.886124 GACCTAGCTTCGCACGCC 60.886 66.667 0.00 0.00 0.00 5.68
51 52 3.248171 CGACCTAGCTTCGCACGC 61.248 66.667 0.00 0.00 0.00 5.34
52 53 1.443872 AACGACCTAGCTTCGCACG 60.444 57.895 6.21 2.86 40.24 5.34
53 54 1.956620 GCAACGACCTAGCTTCGCAC 61.957 60.000 6.21 0.00 40.24 5.34
54 55 1.736645 GCAACGACCTAGCTTCGCA 60.737 57.895 6.21 0.00 40.24 5.10
55 56 1.014564 AAGCAACGACCTAGCTTCGC 61.015 55.000 6.21 0.00 44.67 4.70
56 57 0.716108 CAAGCAACGACCTAGCTTCG 59.284 55.000 4.77 4.77 46.01 3.79
57 58 0.444260 GCAAGCAACGACCTAGCTTC 59.556 55.000 0.00 0.00 46.01 3.86
59 60 1.376037 GGCAAGCAACGACCTAGCT 60.376 57.895 0.00 0.00 41.03 3.32
60 61 2.399356 GGGCAAGCAACGACCTAGC 61.399 63.158 0.00 0.00 0.00 3.42
61 62 0.321653 AAGGGCAAGCAACGACCTAG 60.322 55.000 0.00 0.00 0.00 3.02
62 63 0.321298 GAAGGGCAAGCAACGACCTA 60.321 55.000 0.00 0.00 0.00 3.08
63 64 1.600916 GAAGGGCAAGCAACGACCT 60.601 57.895 0.00 0.00 0.00 3.85
64 65 1.600916 AGAAGGGCAAGCAACGACC 60.601 57.895 0.00 0.00 0.00 4.79
65 66 0.884704 TCAGAAGGGCAAGCAACGAC 60.885 55.000 0.00 0.00 0.00 4.34
66 67 0.036732 ATCAGAAGGGCAAGCAACGA 59.963 50.000 0.00 0.00 0.00 3.85
67 68 0.169672 CATCAGAAGGGCAAGCAACG 59.830 55.000 0.00 0.00 0.00 4.10
68 69 1.200948 GACATCAGAAGGGCAAGCAAC 59.799 52.381 0.00 0.00 0.00 4.17
69 70 1.538047 GACATCAGAAGGGCAAGCAA 58.462 50.000 0.00 0.00 0.00 3.91
70 71 0.674581 CGACATCAGAAGGGCAAGCA 60.675 55.000 0.00 0.00 0.00 3.91
71 72 0.391661 TCGACATCAGAAGGGCAAGC 60.392 55.000 0.00 0.00 0.00 4.01
72 73 1.938577 CATCGACATCAGAAGGGCAAG 59.061 52.381 0.00 0.00 0.00 4.01
73 74 1.407299 CCATCGACATCAGAAGGGCAA 60.407 52.381 0.00 0.00 0.00 4.52
74 75 0.178767 CCATCGACATCAGAAGGGCA 59.821 55.000 0.00 0.00 0.00 5.36
75 76 0.179000 ACCATCGACATCAGAAGGGC 59.821 55.000 0.00 0.00 31.32 5.19
76 77 1.202580 GGACCATCGACATCAGAAGGG 60.203 57.143 0.00 0.00 31.32 3.95
77 78 1.536922 CGGACCATCGACATCAGAAGG 60.537 57.143 0.00 0.00 33.13 3.46
78 79 1.536922 CCGGACCATCGACATCAGAAG 60.537 57.143 0.00 0.00 0.00 2.85
79 80 0.459899 CCGGACCATCGACATCAGAA 59.540 55.000 0.00 0.00 0.00 3.02
80 81 0.683179 ACCGGACCATCGACATCAGA 60.683 55.000 9.46 0.00 0.00 3.27
81 82 0.528466 CACCGGACCATCGACATCAG 60.528 60.000 9.46 0.00 0.00 2.90
82 83 1.515487 CACCGGACCATCGACATCA 59.485 57.895 9.46 0.00 0.00 3.07
83 84 1.883084 GCACCGGACCATCGACATC 60.883 63.158 9.46 0.00 0.00 3.06
84 85 2.186903 GCACCGGACCATCGACAT 59.813 61.111 9.46 0.00 0.00 3.06
85 86 4.429212 CGCACCGGACCATCGACA 62.429 66.667 9.46 0.00 0.00 4.35
90 91 4.424711 ATTGGCGCACCGGACCAT 62.425 61.111 9.46 0.00 39.70 3.55
97 98 4.054825 CACACCCATTGGCGCACC 62.055 66.667 10.83 0.00 33.59 5.01
98 99 4.722855 GCACACCCATTGGCGCAC 62.723 66.667 10.83 0.00 33.59 5.34
101 102 1.453745 ATAGGCACACCCATTGGCG 60.454 57.895 0.00 0.00 44.08 5.69
102 103 2.019897 GCATAGGCACACCCATTGGC 62.020 60.000 0.00 0.00 40.72 4.52
103 104 0.396139 AGCATAGGCACACCCATTGG 60.396 55.000 0.67 0.00 44.61 3.16
104 105 0.742505 CAGCATAGGCACACCCATTG 59.257 55.000 0.67 0.00 44.61 2.82
105 106 0.396139 CCAGCATAGGCACACCCATT 60.396 55.000 0.67 0.00 44.61 3.16
106 107 1.228228 CCAGCATAGGCACACCCAT 59.772 57.895 0.67 0.00 44.61 4.00
107 108 2.676608 CCAGCATAGGCACACCCA 59.323 61.111 0.67 0.00 44.61 4.51
115 116 0.818445 CAGCCAGAAGCCAGCATAGG 60.818 60.000 0.00 0.00 45.47 2.57
116 117 0.107312 ACAGCCAGAAGCCAGCATAG 60.107 55.000 0.00 0.00 45.47 2.23
117 118 0.393402 CACAGCCAGAAGCCAGCATA 60.393 55.000 0.00 0.00 45.47 3.14
118 119 1.677966 CACAGCCAGAAGCCAGCAT 60.678 57.895 0.00 0.00 45.47 3.79
119 120 2.281970 CACAGCCAGAAGCCAGCA 60.282 61.111 0.00 0.00 45.47 4.41
120 121 2.033141 TCACAGCCAGAAGCCAGC 59.967 61.111 0.00 0.00 45.47 4.85
121 122 0.954449 CTGTCACAGCCAGAAGCCAG 60.954 60.000 0.00 0.00 45.47 4.85
122 123 1.071987 CTGTCACAGCCAGAAGCCA 59.928 57.895 0.00 0.00 45.47 4.75
123 124 0.673022 CTCTGTCACAGCCAGAAGCC 60.673 60.000 0.00 0.00 45.47 4.35
124 125 0.319728 TCTCTGTCACAGCCAGAAGC 59.680 55.000 0.00 0.00 38.42 3.86
125 126 2.036992 ACTTCTCTGTCACAGCCAGAAG 59.963 50.000 24.81 24.81 42.75 2.85
126 127 2.036475 GACTTCTCTGTCACAGCCAGAA 59.964 50.000 0.00 4.35 38.42 3.02
127 128 1.615883 GACTTCTCTGTCACAGCCAGA 59.384 52.381 0.00 0.00 37.40 3.86
128 129 1.668337 CGACTTCTCTGTCACAGCCAG 60.668 57.143 0.00 0.00 36.82 4.85
129 130 0.315251 CGACTTCTCTGTCACAGCCA 59.685 55.000 0.00 0.00 36.82 4.75
130 131 0.389166 CCGACTTCTCTGTCACAGCC 60.389 60.000 0.00 0.00 36.82 4.85
131 132 0.598562 TCCGACTTCTCTGTCACAGC 59.401 55.000 0.00 0.00 36.82 4.40
132 133 1.402194 GCTCCGACTTCTCTGTCACAG 60.402 57.143 0.00 0.00 36.82 3.66
133 134 0.598562 GCTCCGACTTCTCTGTCACA 59.401 55.000 0.00 0.00 36.82 3.58
134 135 0.885196 AGCTCCGACTTCTCTGTCAC 59.115 55.000 0.00 0.00 36.82 3.67
135 136 0.884514 CAGCTCCGACTTCTCTGTCA 59.115 55.000 0.00 0.00 36.82 3.58
136 137 0.457681 GCAGCTCCGACTTCTCTGTC 60.458 60.000 0.00 0.00 0.00 3.51
137 138 1.589113 GCAGCTCCGACTTCTCTGT 59.411 57.895 0.00 0.00 0.00 3.41
138 139 1.515952 CGCAGCTCCGACTTCTCTG 60.516 63.158 0.00 0.00 0.00 3.35
139 140 1.974343 ACGCAGCTCCGACTTCTCT 60.974 57.895 2.80 0.00 0.00 3.10
140 141 1.803519 CACGCAGCTCCGACTTCTC 60.804 63.158 2.80 0.00 0.00 2.87
141 142 2.259818 CACGCAGCTCCGACTTCT 59.740 61.111 2.80 0.00 0.00 2.85
142 143 3.482783 GCACGCAGCTCCGACTTC 61.483 66.667 2.80 0.00 41.15 3.01
143 144 3.807631 TTGCACGCAGCTCCGACTT 62.808 57.895 2.80 0.00 45.94 3.01
144 145 3.596066 ATTGCACGCAGCTCCGACT 62.596 57.895 2.80 0.00 45.94 4.18
145 146 3.121030 ATTGCACGCAGCTCCGAC 61.121 61.111 2.80 0.00 45.94 4.79
146 147 3.120385 CATTGCACGCAGCTCCGA 61.120 61.111 2.80 0.00 45.94 4.55
147 148 4.824166 GCATTGCACGCAGCTCCG 62.824 66.667 3.15 0.00 45.94 4.63
148 149 4.487412 GGCATTGCACGCAGCTCC 62.487 66.667 11.39 0.00 45.94 4.70
149 150 3.392595 GAGGCATTGCACGCAGCTC 62.393 63.158 11.39 2.92 45.94 4.09
150 151 3.437795 GAGGCATTGCACGCAGCT 61.438 61.111 11.39 0.00 45.94 4.24
151 152 3.437795 AGAGGCATTGCACGCAGC 61.438 61.111 11.39 0.36 45.96 5.25
152 153 2.483745 CAGAGGCATTGCACGCAG 59.516 61.111 11.39 0.00 0.00 5.18
153 154 3.740397 GCAGAGGCATTGCACGCA 61.740 61.111 11.39 0.00 41.17 5.24
154 155 4.824166 CGCAGAGGCATTGCACGC 62.824 66.667 11.39 5.93 41.59 5.34
155 156 4.170062 CCGCAGAGGCATTGCACG 62.170 66.667 11.39 5.73 41.59 5.34
164 165 2.125552 TCATCGTTGCCGCAGAGG 60.126 61.111 0.00 0.00 44.97 3.69
165 166 1.416813 GAGTCATCGTTGCCGCAGAG 61.417 60.000 0.00 0.00 0.00 3.35
166 167 1.446099 GAGTCATCGTTGCCGCAGA 60.446 57.895 0.00 0.00 0.00 4.26
167 168 2.456119 GGAGTCATCGTTGCCGCAG 61.456 63.158 0.00 0.00 0.00 5.18
168 169 2.434185 GGAGTCATCGTTGCCGCA 60.434 61.111 0.00 0.00 0.00 5.69
169 170 1.815421 ATGGAGTCATCGTTGCCGC 60.815 57.895 0.00 0.00 0.00 6.53
170 171 0.460109 TCATGGAGTCATCGTTGCCG 60.460 55.000 0.00 0.00 0.00 5.69
171 172 1.293924 CTCATGGAGTCATCGTTGCC 58.706 55.000 0.00 0.00 0.00 4.52
172 173 1.293924 CCTCATGGAGTCATCGTTGC 58.706 55.000 0.00 0.00 34.57 4.17
173 174 1.945387 CCCTCATGGAGTCATCGTTG 58.055 55.000 0.00 0.00 35.39 4.10
174 175 0.179000 GCCCTCATGGAGTCATCGTT 59.821 55.000 0.00 0.00 35.39 3.85
175 176 1.826024 GCCCTCATGGAGTCATCGT 59.174 57.895 0.00 0.00 35.39 3.73
176 177 1.300465 CGCCCTCATGGAGTCATCG 60.300 63.158 0.00 0.00 35.39 3.84
177 178 1.070445 CCGCCCTCATGGAGTCATC 59.930 63.158 0.00 0.00 35.39 2.92
178 179 1.274703 AACCGCCCTCATGGAGTCAT 61.275 55.000 0.00 0.00 35.39 3.06
179 180 1.488705 AAACCGCCCTCATGGAGTCA 61.489 55.000 0.00 0.00 35.39 3.41
180 181 0.322546 AAAACCGCCCTCATGGAGTC 60.323 55.000 0.00 0.00 35.39 3.36
181 182 0.322546 GAAAACCGCCCTCATGGAGT 60.323 55.000 0.00 0.00 35.39 3.85
182 183 0.322456 TGAAAACCGCCCTCATGGAG 60.322 55.000 0.00 0.00 35.39 3.86
183 184 0.322456 CTGAAAACCGCCCTCATGGA 60.322 55.000 0.00 0.00 35.39 3.41
184 185 1.937546 GCTGAAAACCGCCCTCATGG 61.938 60.000 0.00 0.00 37.09 3.66
185 186 1.508088 GCTGAAAACCGCCCTCATG 59.492 57.895 0.00 0.00 0.00 3.07
186 187 2.040544 CGCTGAAAACCGCCCTCAT 61.041 57.895 0.00 0.00 0.00 2.90
187 188 2.668212 CGCTGAAAACCGCCCTCA 60.668 61.111 0.00 0.00 0.00 3.86
188 189 3.431725 CCGCTGAAAACCGCCCTC 61.432 66.667 0.00 0.00 0.00 4.30
194 195 4.038080 CACCGCCCGCTGAAAACC 62.038 66.667 0.00 0.00 0.00 3.27
195 196 4.700365 GCACCGCCCGCTGAAAAC 62.700 66.667 0.00 0.00 0.00 2.43
196 197 4.947147 AGCACCGCCCGCTGAAAA 62.947 61.111 0.00 0.00 38.60 2.29
208 209 1.596477 GCATCATCCGGAGAGCACC 60.596 63.158 11.34 0.00 32.47 5.01
209 210 1.953138 CGCATCATCCGGAGAGCAC 60.953 63.158 11.34 0.00 32.47 4.40
210 211 2.418777 CGCATCATCCGGAGAGCA 59.581 61.111 11.34 0.00 32.47 4.26
211 212 3.040763 GCGCATCATCCGGAGAGC 61.041 66.667 11.34 10.15 0.00 4.09
212 213 1.664017 CAGCGCATCATCCGGAGAG 60.664 63.158 11.34 5.17 0.00 3.20
213 214 2.418777 CAGCGCATCATCCGGAGA 59.581 61.111 11.34 8.24 0.00 3.71
214 215 2.664185 CCAGCGCATCATCCGGAG 60.664 66.667 11.34 2.05 0.00 4.63
215 216 3.153781 TCCAGCGCATCATCCGGA 61.154 61.111 6.61 6.61 0.00 5.14
216 217 2.087462 TAGTCCAGCGCATCATCCGG 62.087 60.000 11.47 0.00 0.00 5.14
217 218 0.665670 CTAGTCCAGCGCATCATCCG 60.666 60.000 11.47 0.00 0.00 4.18
218 219 0.320247 CCTAGTCCAGCGCATCATCC 60.320 60.000 11.47 0.00 0.00 3.51
219 220 0.390860 ACCTAGTCCAGCGCATCATC 59.609 55.000 11.47 0.00 0.00 2.92
220 221 0.390860 GACCTAGTCCAGCGCATCAT 59.609 55.000 11.47 0.00 0.00 2.45
221 222 1.816537 GACCTAGTCCAGCGCATCA 59.183 57.895 11.47 0.00 0.00 3.07
222 223 1.299468 CGACCTAGTCCAGCGCATC 60.299 63.158 11.47 0.00 0.00 3.91
223 224 2.786495 CCGACCTAGTCCAGCGCAT 61.786 63.158 11.47 0.00 0.00 4.73
224 225 3.449227 CCGACCTAGTCCAGCGCA 61.449 66.667 11.47 0.00 0.00 6.09
225 226 3.450115 ACCGACCTAGTCCAGCGC 61.450 66.667 0.00 0.00 0.00 5.92
226 227 2.490217 CACCGACCTAGTCCAGCG 59.510 66.667 0.00 0.00 0.00 5.18
227 228 2.184579 GCACCGACCTAGTCCAGC 59.815 66.667 0.00 0.00 0.00 4.85
228 229 1.994507 CTCGCACCGACCTAGTCCAG 61.995 65.000 0.00 0.00 0.00 3.86
229 230 2.034532 TCGCACCGACCTAGTCCA 59.965 61.111 0.00 0.00 0.00 4.02
230 231 2.772691 CCTCGCACCGACCTAGTCC 61.773 68.421 0.00 0.00 0.00 3.85
231 232 2.799371 CCTCGCACCGACCTAGTC 59.201 66.667 0.00 0.00 0.00 2.59
232 233 3.450115 GCCTCGCACCGACCTAGT 61.450 66.667 0.00 0.00 0.00 2.57
233 234 2.711922 AAGCCTCGCACCGACCTAG 61.712 63.158 0.00 0.00 0.00 3.02
234 235 2.678934 AAGCCTCGCACCGACCTA 60.679 61.111 0.00 0.00 0.00 3.08
235 236 4.379243 CAAGCCTCGCACCGACCT 62.379 66.667 0.00 0.00 0.00 3.85
238 239 4.617520 TTGCAAGCCTCGCACCGA 62.618 61.111 0.00 0.00 39.59 4.69
239 240 4.389576 GTTGCAAGCCTCGCACCG 62.390 66.667 0.00 0.00 39.59 4.94
240 241 2.075426 AAAGTTGCAAGCCTCGCACC 62.075 55.000 0.00 0.00 39.59 5.01
241 242 0.661483 GAAAGTTGCAAGCCTCGCAC 60.661 55.000 0.00 0.00 39.59 5.34
242 243 0.819259 AGAAAGTTGCAAGCCTCGCA 60.819 50.000 0.00 0.00 37.68 5.10
243 244 0.312102 AAGAAAGTTGCAAGCCTCGC 59.688 50.000 0.00 0.00 0.00 5.03
244 245 1.876156 AGAAGAAAGTTGCAAGCCTCG 59.124 47.619 0.00 0.00 0.00 4.63
245 246 2.620585 ACAGAAGAAAGTTGCAAGCCTC 59.379 45.455 0.00 0.00 0.00 4.70
246 247 2.360165 CACAGAAGAAAGTTGCAAGCCT 59.640 45.455 0.00 0.00 0.00 4.58
247 248 2.358898 TCACAGAAGAAAGTTGCAAGCC 59.641 45.455 0.00 0.00 0.00 4.35
248 249 3.698029 TCACAGAAGAAAGTTGCAAGC 57.302 42.857 0.00 0.00 0.00 4.01
249 250 4.040376 GCTTCACAGAAGAAAGTTGCAAG 58.960 43.478 10.72 0.00 0.00 4.01
250 251 3.443329 TGCTTCACAGAAGAAAGTTGCAA 59.557 39.130 10.72 0.00 0.00 4.08
251 252 3.016031 TGCTTCACAGAAGAAAGTTGCA 58.984 40.909 10.72 0.00 0.00 4.08
252 253 3.698029 TGCTTCACAGAAGAAAGTTGC 57.302 42.857 10.72 0.00 0.00 4.17
253 254 6.267817 TGAAATGCTTCACAGAAGAAAGTTG 58.732 36.000 10.72 0.00 36.62 3.16
254 255 6.455360 TGAAATGCTTCACAGAAGAAAGTT 57.545 33.333 10.72 3.69 36.62 2.66
255 256 5.506982 GCTGAAATGCTTCACAGAAGAAAGT 60.507 40.000 10.72 0.00 36.62 2.66
256 257 4.916249 GCTGAAATGCTTCACAGAAGAAAG 59.084 41.667 10.72 0.00 36.62 2.62
257 258 4.338964 TGCTGAAATGCTTCACAGAAGAAA 59.661 37.500 10.72 0.00 36.62 2.52
258 259 3.884693 TGCTGAAATGCTTCACAGAAGAA 59.115 39.130 10.72 0.14 36.62 2.52
259 260 3.479489 TGCTGAAATGCTTCACAGAAGA 58.521 40.909 10.72 0.00 36.62 2.87
260 261 3.909776 TGCTGAAATGCTTCACAGAAG 57.090 42.857 2.48 2.48 36.62 2.85
261 262 4.652421 TTTGCTGAAATGCTTCACAGAA 57.348 36.364 0.00 0.00 36.62 3.02
262 263 4.652421 TTTTGCTGAAATGCTTCACAGA 57.348 36.364 0.00 0.00 36.62 3.41
263 264 4.089493 CGATTTTGCTGAAATGCTTCACAG 59.911 41.667 3.81 0.00 38.06 3.66
264 265 3.982701 CGATTTTGCTGAAATGCTTCACA 59.017 39.130 3.81 0.00 38.06 3.58
265 266 3.365820 CCGATTTTGCTGAAATGCTTCAC 59.634 43.478 3.81 0.00 38.06 3.18
266 267 3.255395 TCCGATTTTGCTGAAATGCTTCA 59.745 39.130 3.81 0.00 38.06 3.02
267 268 3.836949 TCCGATTTTGCTGAAATGCTTC 58.163 40.909 3.81 0.00 38.06 3.86
268 269 3.841643 CTCCGATTTTGCTGAAATGCTT 58.158 40.909 3.81 0.00 38.06 3.91
269 270 2.416431 GCTCCGATTTTGCTGAAATGCT 60.416 45.455 3.81 0.00 38.06 3.79
270 271 1.922545 GCTCCGATTTTGCTGAAATGC 59.077 47.619 3.81 0.00 38.06 3.56
271 272 3.498927 AGCTCCGATTTTGCTGAAATG 57.501 42.857 3.81 0.00 38.06 2.32
277 278 0.682209 ATGGCAGCTCCGATTTTGCT 60.682 50.000 0.00 0.00 37.80 3.91
278 279 0.526954 CATGGCAGCTCCGATTTTGC 60.527 55.000 0.00 0.00 37.80 3.68
279 280 0.813184 ACATGGCAGCTCCGATTTTG 59.187 50.000 0.00 0.00 37.80 2.44
280 281 1.098050 GACATGGCAGCTCCGATTTT 58.902 50.000 0.00 0.00 37.80 1.82
281 282 0.749454 GGACATGGCAGCTCCGATTT 60.749 55.000 0.00 0.00 37.80 2.17
282 283 1.153086 GGACATGGCAGCTCCGATT 60.153 57.895 0.00 0.00 37.80 3.34
283 284 2.037620 GAGGACATGGCAGCTCCGAT 62.038 60.000 0.00 0.00 37.80 4.18
284 285 2.685017 AGGACATGGCAGCTCCGA 60.685 61.111 0.00 0.00 37.80 4.55
285 286 2.202987 GAGGACATGGCAGCTCCG 60.203 66.667 0.00 0.00 37.80 4.63
286 287 2.202987 CGAGGACATGGCAGCTCC 60.203 66.667 0.00 5.28 0.00 4.70
287 288 1.520342 GTCGAGGACATGGCAGCTC 60.520 63.158 0.00 0.00 32.09 4.09
288 289 2.581354 GTCGAGGACATGGCAGCT 59.419 61.111 0.00 0.00 32.09 4.24
289 290 2.887568 CGTCGAGGACATGGCAGC 60.888 66.667 0.00 0.00 32.09 5.25
290 291 2.842394 AAGCGTCGAGGACATGGCAG 62.842 60.000 9.75 0.00 32.09 4.85
291 292 2.835701 GAAGCGTCGAGGACATGGCA 62.836 60.000 9.75 0.00 32.09 4.92
292 293 2.125512 AAGCGTCGAGGACATGGC 60.126 61.111 9.75 0.00 32.09 4.40
293 294 4.094684 GAAGCGTCGAGGACATGG 57.905 61.111 9.75 0.00 32.09 3.66
303 304 0.938168 AAACAGTCGACCGAAGCGTC 60.938 55.000 13.01 0.00 0.00 5.19
304 305 1.066918 AAACAGTCGACCGAAGCGT 59.933 52.632 13.01 0.00 0.00 5.07
305 306 1.487231 CAAACAGTCGACCGAAGCG 59.513 57.895 13.01 0.00 0.00 4.68
306 307 1.860078 CCAAACAGTCGACCGAAGC 59.140 57.895 13.01 0.00 0.00 3.86
307 308 0.600255 AGCCAAACAGTCGACCGAAG 60.600 55.000 13.01 2.53 0.00 3.79
308 309 0.179067 AAGCCAAACAGTCGACCGAA 60.179 50.000 13.01 0.00 0.00 4.30
309 310 0.878523 CAAGCCAAACAGTCGACCGA 60.879 55.000 13.01 0.00 0.00 4.69
310 311 1.157870 ACAAGCCAAACAGTCGACCG 61.158 55.000 13.01 4.15 0.00 4.79
311 312 0.586802 GACAAGCCAAACAGTCGACC 59.413 55.000 13.01 0.00 0.00 4.79
312 313 1.261619 CAGACAAGCCAAACAGTCGAC 59.738 52.381 7.70 7.70 36.18 4.20
313 314 1.134521 ACAGACAAGCCAAACAGTCGA 60.135 47.619 0.00 0.00 36.18 4.20
314 315 1.003545 CACAGACAAGCCAAACAGTCG 60.004 52.381 0.00 0.00 36.18 4.18
315 316 1.334869 CCACAGACAAGCCAAACAGTC 59.665 52.381 0.00 0.00 0.00 3.51
316 317 1.392589 CCACAGACAAGCCAAACAGT 58.607 50.000 0.00 0.00 0.00 3.55
317 318 0.031178 GCCACAGACAAGCCAAACAG 59.969 55.000 0.00 0.00 0.00 3.16
318 319 1.391157 GGCCACAGACAAGCCAAACA 61.391 55.000 0.00 0.00 46.34 2.83
319 320 1.363807 GGCCACAGACAAGCCAAAC 59.636 57.895 0.00 0.00 46.34 2.93
320 321 3.854856 GGCCACAGACAAGCCAAA 58.145 55.556 0.00 0.00 46.34 3.28
336 337 2.666190 CACACACAGCCGACCTGG 60.666 66.667 7.74 0.00 46.14 4.45
338 339 4.626081 GGCACACACAGCCGACCT 62.626 66.667 0.00 0.00 43.15 3.85
356 357 1.223487 CCCAGATACAACCCCACGG 59.777 63.158 0.00 0.00 0.00 4.94
357 358 0.326927 AACCCAGATACAACCCCACG 59.673 55.000 0.00 0.00 0.00 4.94
358 359 2.597578 AAACCCAGATACAACCCCAC 57.402 50.000 0.00 0.00 0.00 4.61
359 360 2.553466 CGAAAACCCAGATACAACCCCA 60.553 50.000 0.00 0.00 0.00 4.96
360 361 2.089201 CGAAAACCCAGATACAACCCC 58.911 52.381 0.00 0.00 0.00 4.95
361 362 1.471287 GCGAAAACCCAGATACAACCC 59.529 52.381 0.00 0.00 0.00 4.11
362 363 1.471287 GGCGAAAACCCAGATACAACC 59.529 52.381 0.00 0.00 0.00 3.77
363 364 2.913777 GGCGAAAACCCAGATACAAC 57.086 50.000 0.00 0.00 0.00 3.32
373 374 2.717580 AGAAAAATCGGGCGAAAACC 57.282 45.000 0.00 0.00 0.00 3.27
374 375 6.699895 ATTAAAGAAAAATCGGGCGAAAAC 57.300 33.333 0.00 0.00 0.00 2.43
375 376 8.701540 GTTAATTAAAGAAAAATCGGGCGAAAA 58.298 29.630 0.00 0.00 0.00 2.29
376 377 7.328982 GGTTAATTAAAGAAAAATCGGGCGAAA 59.671 33.333 0.00 0.00 0.00 3.46
377 378 6.807720 GGTTAATTAAAGAAAAATCGGGCGAA 59.192 34.615 0.00 0.00 0.00 4.70
378 379 6.324042 GGTTAATTAAAGAAAAATCGGGCGA 58.676 36.000 0.00 0.00 0.00 5.54
379 380 5.228427 CGGTTAATTAAAGAAAAATCGGGCG 59.772 40.000 0.00 0.00 0.00 6.13
380 381 5.517411 CCGGTTAATTAAAGAAAAATCGGGC 59.483 40.000 0.00 0.00 0.00 6.13
381 382 6.037726 CCCGGTTAATTAAAGAAAAATCGGG 58.962 40.000 10.39 10.39 44.73 5.14
382 383 5.517411 GCCCGGTTAATTAAAGAAAAATCGG 59.483 40.000 0.00 0.00 0.00 4.18
383 384 6.094061 TGCCCGGTTAATTAAAGAAAAATCG 58.906 36.000 0.00 0.00 0.00 3.34
384 385 7.892778 TTGCCCGGTTAATTAAAGAAAAATC 57.107 32.000 0.00 0.00 0.00 2.17
385 386 8.856153 ATTTGCCCGGTTAATTAAAGAAAAAT 57.144 26.923 0.00 0.50 0.00 1.82
386 387 8.151596 AGATTTGCCCGGTTAATTAAAGAAAAA 58.848 29.630 0.00 0.00 0.00 1.94
387 388 7.672240 AGATTTGCCCGGTTAATTAAAGAAAA 58.328 30.769 0.00 0.00 0.00 2.29
388 389 7.177744 AGAGATTTGCCCGGTTAATTAAAGAAA 59.822 33.333 0.00 0.00 0.00 2.52
389 390 6.661805 AGAGATTTGCCCGGTTAATTAAAGAA 59.338 34.615 0.00 0.00 0.00 2.52
390 391 6.184789 AGAGATTTGCCCGGTTAATTAAAGA 58.815 36.000 0.00 0.00 0.00 2.52
391 392 6.451064 AGAGATTTGCCCGGTTAATTAAAG 57.549 37.500 0.00 0.00 0.00 1.85
392 393 6.661805 AGAAGAGATTTGCCCGGTTAATTAAA 59.338 34.615 0.00 0.00 0.00 1.52
393 394 6.184789 AGAAGAGATTTGCCCGGTTAATTAA 58.815 36.000 0.00 0.00 0.00 1.40
394 395 5.751586 AGAAGAGATTTGCCCGGTTAATTA 58.248 37.500 0.00 0.00 0.00 1.40
395 396 4.600062 AGAAGAGATTTGCCCGGTTAATT 58.400 39.130 0.00 0.00 0.00 1.40
396 397 4.236527 AGAAGAGATTTGCCCGGTTAAT 57.763 40.909 0.00 0.00 0.00 1.40
397 398 3.713826 AGAAGAGATTTGCCCGGTTAA 57.286 42.857 0.00 0.00 0.00 2.01
398 399 3.713826 AAGAAGAGATTTGCCCGGTTA 57.286 42.857 0.00 0.00 0.00 2.85
399 400 2.586648 AAGAAGAGATTTGCCCGGTT 57.413 45.000 0.00 0.00 0.00 4.44
400 401 2.586648 AAAGAAGAGATTTGCCCGGT 57.413 45.000 0.00 0.00 0.00 5.28
401 402 3.942130 AAAAAGAAGAGATTTGCCCGG 57.058 42.857 0.00 0.00 0.00 5.73
402 403 6.620678 TGATTAAAAAGAAGAGATTTGCCCG 58.379 36.000 0.00 0.00 0.00 6.13
403 404 8.876790 CATTGATTAAAAAGAAGAGATTTGCCC 58.123 33.333 0.00 0.00 0.00 5.36
404 405 9.643693 TCATTGATTAAAAAGAAGAGATTTGCC 57.356 29.630 0.00 0.00 0.00 4.52
412 413 9.775854 TGCCATTTTCATTGATTAAAAAGAAGA 57.224 25.926 0.00 0.00 0.00 2.87
422 423 7.810759 GCAAAAGATTTGCCATTTTCATTGATT 59.189 29.630 15.12 0.00 39.38 2.57
423 424 7.309920 GCAAAAGATTTGCCATTTTCATTGAT 58.690 30.769 15.12 0.00 39.38 2.57
424 425 6.670233 GCAAAAGATTTGCCATTTTCATTGA 58.330 32.000 15.12 0.00 39.38 2.57
425 426 6.921332 GCAAAAGATTTGCCATTTTCATTG 57.079 33.333 15.12 0.00 39.38 2.82
436 437 7.656707 TTTTGATAAGAGGCAAAAGATTTGC 57.343 32.000 17.18 17.18 44.22 3.68
459 460 9.665719 TTTCCTTAAAAACTTGAGCTGATTTTT 57.334 25.926 0.00 0.00 37.80 1.94
460 461 9.665719 TTTTCCTTAAAAACTTGAGCTGATTTT 57.334 25.926 0.00 0.00 31.88 1.82
461 462 9.317936 CTTTTCCTTAAAAACTTGAGCTGATTT 57.682 29.630 0.00 0.00 34.26 2.17
469 470 5.068067 CCCGTCCTTTTCCTTAAAAACTTGA 59.932 40.000 0.00 0.00 34.26 3.02
471 472 5.202765 TCCCGTCCTTTTCCTTAAAAACTT 58.797 37.500 0.00 0.00 34.26 2.66
473 474 5.518848 TTCCCGTCCTTTTCCTTAAAAAC 57.481 39.130 0.00 0.00 34.26 2.43
474 475 6.324254 TCAATTCCCGTCCTTTTCCTTAAAAA 59.676 34.615 0.00 0.00 34.26 1.94
478 479 4.202482 TGTCAATTCCCGTCCTTTTCCTTA 60.202 41.667 0.00 0.00 0.00 2.69
482 483 3.181510 CGATGTCAATTCCCGTCCTTTTC 60.182 47.826 0.00 0.00 0.00 2.29
487 488 1.867233 CATCGATGTCAATTCCCGTCC 59.133 52.381 17.50 0.00 0.00 4.79
499 500 2.583319 CTGGCGCGACATCGATGT 60.583 61.111 30.37 30.37 45.16 3.06
530 531 2.476051 CGACGCCATCAACAGTGC 59.524 61.111 0.00 0.00 0.00 4.40
544 545 2.012948 GTTCCACGTGTCGACCGAC 61.013 63.158 26.02 14.88 44.77 4.79
545 546 2.002509 TTGTTCCACGTGTCGACCGA 62.003 55.000 26.02 0.00 0.00 4.69
557 558 5.278907 CCATTTCTGTTGCTGTATTGTTCCA 60.279 40.000 0.00 0.00 0.00 3.53
565 566 2.161855 CCTGCCATTTCTGTTGCTGTA 58.838 47.619 0.00 0.00 0.00 2.74
567 568 0.389426 GCCTGCCATTTCTGTTGCTG 60.389 55.000 0.00 0.00 0.00 4.41
569 570 1.444895 CGCCTGCCATTTCTGTTGC 60.445 57.895 0.00 0.00 0.00 4.17
588 589 2.821969 GCAATTCTGTGAGTCCCATGTT 59.178 45.455 0.00 0.00 0.00 2.71
589 590 2.224843 TGCAATTCTGTGAGTCCCATGT 60.225 45.455 0.00 0.00 0.00 3.21
592 593 2.439409 CATGCAATTCTGTGAGTCCCA 58.561 47.619 0.00 0.00 0.00 4.37
600 610 7.701539 TCACTAATTAACCATGCAATTCTGT 57.298 32.000 0.00 0.00 0.00 3.41
634 644 3.244422 ACATCGGTGAATGGTGTTGTACT 60.244 43.478 0.65 0.00 0.00 2.73
635 645 3.071479 ACATCGGTGAATGGTGTTGTAC 58.929 45.455 0.65 0.00 0.00 2.90
636 646 3.410631 ACATCGGTGAATGGTGTTGTA 57.589 42.857 0.65 0.00 0.00 2.41
637 647 2.270352 ACATCGGTGAATGGTGTTGT 57.730 45.000 0.65 0.00 0.00 3.32
652 902 4.454728 AATGCATGTTGGTAACCACATC 57.545 40.909 0.00 0.00 30.78 3.06
655 905 3.987220 GTGAAATGCATGTTGGTAACCAC 59.013 43.478 0.00 0.00 30.78 4.16
678 928 0.460987 CCTTCCTCTCGATGGTGTGC 60.461 60.000 4.79 0.00 32.26 4.57
690 940 0.250513 ACTCAATCGTGGCCTTCCTC 59.749 55.000 3.32 0.00 0.00 3.71
696 946 1.212751 GGCAAACTCAATCGTGGCC 59.787 57.895 0.00 0.00 33.08 5.36
724 1369 3.261981 AGTGGGCAAGTAATAACGAGG 57.738 47.619 0.00 0.00 0.00 4.63
798 1454 0.690762 GGTGGTGTATGTGTCCCTGT 59.309 55.000 0.00 0.00 0.00 4.00
808 1464 1.989586 TGGCCTTTGTAGGTGGTGTAT 59.010 47.619 3.32 0.00 44.00 2.29
819 1475 0.396974 TGGTCTGCTTTGGCCTTTGT 60.397 50.000 3.32 0.00 37.74 2.83
825 1481 0.595095 CTGTTCTGGTCTGCTTTGGC 59.405 55.000 0.00 0.00 39.26 4.52
826 1482 1.972872 ACTGTTCTGGTCTGCTTTGG 58.027 50.000 0.00 0.00 0.00 3.28
827 1483 4.130118 AGTAACTGTTCTGGTCTGCTTTG 58.870 43.478 0.00 0.00 0.00 2.77
829 1485 5.546621 TTAGTAACTGTTCTGGTCTGCTT 57.453 39.130 0.00 0.00 0.00 3.91
830 1486 5.546621 TTTAGTAACTGTTCTGGTCTGCT 57.453 39.130 0.00 0.00 0.00 4.24
831 1487 6.037830 TGTTTTTAGTAACTGTTCTGGTCTGC 59.962 38.462 0.00 0.00 0.00 4.26
834 1491 6.238566 GGGTGTTTTTAGTAACTGTTCTGGTC 60.239 42.308 0.00 0.00 0.00 4.02
944 1607 5.151454 TCTTTCTCTGTCCTTCCTCTTTCT 58.849 41.667 0.00 0.00 0.00 2.52
949 1612 5.476091 TCTTTCTTTCTCTGTCCTTCCTC 57.524 43.478 0.00 0.00 0.00 3.71
956 1624 4.636249 TCTGGCTTCTTTCTTTCTCTGTC 58.364 43.478 0.00 0.00 0.00 3.51
1098 1770 4.004982 ACGGCGAAACAGGTACAAATTAT 58.995 39.130 16.62 0.00 0.00 1.28
1109 1781 2.058829 AACAAGGCACGGCGAAACAG 62.059 55.000 16.62 0.76 0.00 3.16
1110 1782 1.658686 AAACAAGGCACGGCGAAACA 61.659 50.000 16.62 0.00 0.00 2.83
1168 1845 2.915604 AGAACTCCACCTGAATCCACAT 59.084 45.455 0.00 0.00 0.00 3.21
1172 1849 1.909302 TCCAGAACTCCACCTGAATCC 59.091 52.381 0.00 0.00 32.37 3.01
1197 1874 0.539051 CCAGTAGGGTCAGCAAGAGG 59.461 60.000 0.00 0.00 0.00 3.69
1210 1887 1.335145 CCCGGTATGTACCCCAGTAG 58.665 60.000 0.00 0.00 43.51 2.57
1325 2003 1.919600 ATGCCCTCTGAAGACAGCCC 61.920 60.000 0.00 0.00 43.17 5.19
1326 2004 0.747283 CATGCCCTCTGAAGACAGCC 60.747 60.000 0.00 0.00 43.17 4.85
1340 2018 1.806542 ACGAACTGATCAACACATGCC 59.193 47.619 0.00 0.00 0.00 4.40
1463 2144 6.632834 GGATCATTTCGACGTCCAATAATTTG 59.367 38.462 10.58 0.00 0.00 2.32
1467 2148 5.018539 AGGATCATTTCGACGTCCAATAA 57.981 39.130 10.58 0.00 0.00 1.40
1495 2176 1.135717 TGCCATTCAACTTCGATTGCG 60.136 47.619 0.00 0.00 39.35 4.85
1516 2197 6.377327 TTTTGGAGAAACTTTCAGCACTAG 57.623 37.500 4.34 0.00 0.00 2.57
1518 2199 5.394553 CCTTTTTGGAGAAACTTTCAGCACT 60.395 40.000 4.34 0.00 38.35 4.40
1519 2200 4.805719 CCTTTTTGGAGAAACTTTCAGCAC 59.194 41.667 4.34 0.00 38.35 4.40
1564 2245 1.468914 GGCCATCGTTCCTCTTGAAAC 59.531 52.381 0.00 0.00 33.94 2.78
1567 2248 0.984230 AAGGCCATCGTTCCTCTTGA 59.016 50.000 5.01 0.00 0.00 3.02
1569 2250 1.134788 CGTAAGGCCATCGTTCCTCTT 60.135 52.381 5.01 0.00 0.00 2.85
1577 2258 0.652592 CTCTTTGCGTAAGGCCATCG 59.347 55.000 5.01 7.76 42.61 3.84
1580 2261 0.978151 TACCTCTTTGCGTAAGGCCA 59.022 50.000 5.01 0.00 42.61 5.36
1588 2269 2.800544 CCGGTGATATTACCTCTTTGCG 59.199 50.000 14.25 0.05 38.62 4.85
1718 2399 3.065371 GTGAGCAGGCCATACATTTGTAC 59.935 47.826 5.01 0.00 32.72 2.90
1790 2471 0.179018 ACAACACCTTCTGCACTCCC 60.179 55.000 0.00 0.00 0.00 4.30
1791 2472 2.143925 GTACAACACCTTCTGCACTCC 58.856 52.381 0.00 0.00 0.00 3.85
1792 2473 2.833794 TGTACAACACCTTCTGCACTC 58.166 47.619 0.00 0.00 0.00 3.51
1793 2474 3.275617 TTGTACAACACCTTCTGCACT 57.724 42.857 3.59 0.00 0.00 4.40
1794 2475 4.202010 ACATTTGTACAACACCTTCTGCAC 60.202 41.667 8.07 0.00 0.00 4.57
1795 2476 3.951037 ACATTTGTACAACACCTTCTGCA 59.049 39.130 8.07 0.00 0.00 4.41
1796 2477 4.568152 ACATTTGTACAACACCTTCTGC 57.432 40.909 8.07 0.00 0.00 4.26
1797 2478 6.611381 CCATACATTTGTACAACACCTTCTG 58.389 40.000 8.07 0.89 32.72 3.02
1798 2479 5.183140 GCCATACATTTGTACAACACCTTCT 59.817 40.000 8.07 0.00 32.72 2.85
1799 2480 5.399013 GCCATACATTTGTACAACACCTTC 58.601 41.667 8.07 0.00 32.72 3.46
1800 2481 4.219725 GGCCATACATTTGTACAACACCTT 59.780 41.667 8.07 0.00 32.72 3.50
1801 2482 3.761752 GGCCATACATTTGTACAACACCT 59.238 43.478 8.07 0.00 32.72 4.00
1802 2483 3.761752 AGGCCATACATTTGTACAACACC 59.238 43.478 8.07 1.53 32.72 4.16
1803 2484 4.732784 CAGGCCATACATTTGTACAACAC 58.267 43.478 8.07 0.00 32.72 3.32
1804 2485 3.192422 GCAGGCCATACATTTGTACAACA 59.808 43.478 8.07 0.30 32.72 3.33
1805 2486 3.443681 AGCAGGCCATACATTTGTACAAC 59.556 43.478 8.07 0.00 32.72 3.32
1806 2487 3.694072 GAGCAGGCCATACATTTGTACAA 59.306 43.478 5.01 3.59 32.72 2.41
1807 2488 3.278574 GAGCAGGCCATACATTTGTACA 58.721 45.455 5.01 0.00 32.72 2.90
1808 2489 3.065371 GTGAGCAGGCCATACATTTGTAC 59.935 47.826 5.01 0.00 32.72 2.90
1809 2490 3.278574 GTGAGCAGGCCATACATTTGTA 58.721 45.455 5.01 0.00 34.67 2.41
1810 2491 2.094675 GTGAGCAGGCCATACATTTGT 58.905 47.619 5.01 0.00 0.00 2.83
1811 2492 1.064505 CGTGAGCAGGCCATACATTTG 59.935 52.381 5.01 0.00 0.00 2.32
1812 2493 1.340017 ACGTGAGCAGGCCATACATTT 60.340 47.619 5.01 0.00 0.00 2.32
1813 2494 0.253044 ACGTGAGCAGGCCATACATT 59.747 50.000 5.01 0.00 0.00 2.71
1814 2495 0.462581 CACGTGAGCAGGCCATACAT 60.463 55.000 10.90 0.00 0.00 2.29
1815 2496 1.079197 CACGTGAGCAGGCCATACA 60.079 57.895 10.90 0.00 0.00 2.29
1816 2497 1.815421 CCACGTGAGCAGGCCATAC 60.815 63.158 19.30 0.00 0.00 2.39
1817 2498 0.973496 TACCACGTGAGCAGGCCATA 60.973 55.000 19.30 0.00 33.30 2.74
1818 2499 1.626356 ATACCACGTGAGCAGGCCAT 61.626 55.000 19.30 0.00 33.30 4.40
1819 2500 2.290287 ATACCACGTGAGCAGGCCA 61.290 57.895 19.30 0.00 33.30 5.36
1820 2501 1.815421 CATACCACGTGAGCAGGCC 60.815 63.158 19.30 0.00 33.30 5.19
1821 2502 2.464459 GCATACCACGTGAGCAGGC 61.464 63.158 19.30 10.87 33.30 4.85
1822 2503 1.815421 GGCATACCACGTGAGCAGG 60.815 63.158 19.30 1.38 35.26 4.85
1823 2504 1.079197 TGGCATACCACGTGAGCAG 60.079 57.895 19.30 1.99 42.67 4.24
1824 2505 1.079197 CTGGCATACCACGTGAGCA 60.079 57.895 19.30 1.13 42.67 4.26
1825 2506 2.464459 GCTGGCATACCACGTGAGC 61.464 63.158 19.30 12.37 42.67 4.26
1826 2507 1.815421 GGCTGGCATACCACGTGAG 60.815 63.158 19.30 9.89 42.67 3.51
1827 2508 2.267642 GGCTGGCATACCACGTGA 59.732 61.111 19.30 0.00 42.67 4.35
1828 2509 2.108514 CAGGCTGGCATACCACGTG 61.109 63.158 9.08 9.08 42.67 4.49
1829 2510 2.268920 CAGGCTGGCATACCACGT 59.731 61.111 6.61 0.00 42.67 4.49
1830 2511 2.514592 CCAGGCTGGCATACCACG 60.515 66.667 22.68 0.00 42.67 4.94
1831 2512 2.124151 CCCAGGCTGGCATACCAC 60.124 66.667 28.51 0.00 42.67 4.16
1832 2513 2.286045 TCCCAGGCTGGCATACCA 60.286 61.111 28.51 3.81 46.51 3.25
1833 2514 2.512896 CTCCCAGGCTGGCATACC 59.487 66.667 28.51 0.00 35.79 2.73
1834 2515 2.512896 CCTCCCAGGCTGGCATAC 59.487 66.667 28.51 0.00 35.79 2.39
1846 2527 1.384643 ACTGATAGGTGGGCCTCCC 60.385 63.158 20.72 12.62 45.64 4.30
1847 2528 1.832912 CACTGATAGGTGGGCCTCC 59.167 63.158 16.96 16.96 45.64 4.30
1855 2536 0.417841 ACTCCCACCCACTGATAGGT 59.582 55.000 0.00 0.00 36.58 3.08
1856 2537 0.833287 CACTCCCACCCACTGATAGG 59.167 60.000 0.00 0.00 0.00 2.57
1857 2538 0.179000 GCACTCCCACCCACTGATAG 59.821 60.000 0.00 0.00 0.00 2.08
1858 2539 0.546507 TGCACTCCCACCCACTGATA 60.547 55.000 0.00 0.00 0.00 2.15
1859 2540 1.210204 ATGCACTCCCACCCACTGAT 61.210 55.000 0.00 0.00 0.00 2.90
1860 2541 1.426251 AATGCACTCCCACCCACTGA 61.426 55.000 0.00 0.00 0.00 3.41
1861 2542 1.075482 AATGCACTCCCACCCACTG 59.925 57.895 0.00 0.00 0.00 3.66
1862 2543 1.075482 CAATGCACTCCCACCCACT 59.925 57.895 0.00 0.00 0.00 4.00
1863 2544 1.978617 CCAATGCACTCCCACCCAC 60.979 63.158 0.00 0.00 0.00 4.61
1864 2545 2.440147 CCAATGCACTCCCACCCA 59.560 61.111 0.00 0.00 0.00 4.51
1865 2546 2.362889 CCCAATGCACTCCCACCC 60.363 66.667 0.00 0.00 0.00 4.61
1866 2547 1.379044 CTCCCAATGCACTCCCACC 60.379 63.158 0.00 0.00 0.00 4.61
1867 2548 0.962356 CACTCCCAATGCACTCCCAC 60.962 60.000 0.00 0.00 0.00 4.61
1868 2549 1.379916 CACTCCCAATGCACTCCCA 59.620 57.895 0.00 0.00 0.00 4.37
1869 2550 2.048603 GCACTCCCAATGCACTCCC 61.049 63.158 0.00 0.00 42.88 4.30
1870 2551 3.595819 GCACTCCCAATGCACTCC 58.404 61.111 0.00 0.00 42.88 3.85
1875 2556 0.610232 ACCTTCTGCACTCCCAATGC 60.610 55.000 0.00 0.00 43.68 3.56
1876 2557 1.171308 CACCTTCTGCACTCCCAATG 58.829 55.000 0.00 0.00 0.00 2.82
1877 2558 0.773644 ACACCTTCTGCACTCCCAAT 59.226 50.000 0.00 0.00 0.00 3.16
1878 2559 0.550914 AACACCTTCTGCACTCCCAA 59.449 50.000 0.00 0.00 0.00 4.12
1879 2560 0.179020 CAACACCTTCTGCACTCCCA 60.179 55.000 0.00 0.00 0.00 4.37
1899 2580 2.847327 AACAGCATGCTAGTGTCACT 57.153 45.000 22.19 10.99 42.53 3.41
2011 2692 2.465860 TAACGGGTCATGTGTTGGAG 57.534 50.000 0.00 0.00 0.00 3.86
2079 2760 8.683615 TCCTTAAGAGTCTTTTTCAAAAAGTCC 58.316 33.333 19.82 12.77 0.00 3.85
2104 2804 6.619801 TCTAAAAGTTCTTGGAAGCACTTC 57.380 37.500 5.12 1.61 40.71 3.01
2136 2837 5.394773 GCAAACCAAACAGAGGTCCTTTTTA 60.395 40.000 0.00 0.00 38.76 1.52
2142 2843 1.692411 AGCAAACCAAACAGAGGTCC 58.308 50.000 0.00 0.00 38.76 4.46
2147 2848 6.478512 AAAATTCCTAGCAAACCAAACAGA 57.521 33.333 0.00 0.00 0.00 3.41
2149 2850 7.213678 CCTAAAAATTCCTAGCAAACCAAACA 58.786 34.615 0.00 0.00 0.00 2.83
2150 2851 6.649141 CCCTAAAAATTCCTAGCAAACCAAAC 59.351 38.462 0.00 0.00 0.00 2.93
2201 2905 0.106419 GGTGTTTGGTTCCAGGGACA 60.106 55.000 0.00 0.00 0.00 4.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.