Multiple sequence alignment - TraesCS4D01G196400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G196400 chr4D 100.000 5429 0 0 1 5429 341039104 341033676 0.000000e+00 10026.0
1 TraesCS4D01G196400 chr4B 96.184 3092 80 10 696 3761 422530269 422527190 0.000000e+00 5022.0
2 TraesCS4D01G196400 chr4B 93.356 888 52 5 4225 5111 422526858 422525977 0.000000e+00 1306.0
3 TraesCS4D01G196400 chr4B 84.456 193 21 6 3869 4053 422527190 422526999 1.200000e-41 182.0
4 TraesCS4D01G196400 chr4B 90.476 84 3 2 4147 4230 422526967 422526889 7.440000e-19 106.0
5 TraesCS4D01G196400 chr4B 81.481 108 19 1 4786 4893 28413271 28413165 2.690000e-13 87.9
6 TraesCS4D01G196400 chr4A 96.321 2854 92 4 1254 4098 126414903 126417752 0.000000e+00 4676.0
7 TraesCS4D01G196400 chr4A 92.160 574 41 4 123 693 530180730 530181302 0.000000e+00 808.0
8 TraesCS4D01G196400 chr4A 90.783 575 21 14 4147 4695 126417760 126418328 0.000000e+00 739.0
9 TraesCS4D01G196400 chr4A 95.111 450 13 2 748 1197 126414136 126414576 0.000000e+00 701.0
10 TraesCS4D01G196400 chr4A 84.910 444 37 12 4695 5136 126418366 126418781 6.500000e-114 422.0
11 TraesCS4D01G196400 chr4A 91.525 118 10 0 1 118 126413992 126414109 4.350000e-36 163.0
12 TraesCS4D01G196400 chr4A 81.347 193 20 6 2559 2750 278427840 278427663 5.670000e-30 143.0
13 TraesCS4D01G196400 chr4A 80.412 194 21 10 2558 2750 403966495 403966318 1.230000e-26 132.0
14 TraesCS4D01G196400 chr4A 78.417 139 30 0 4906 5044 453674820 453674958 2.080000e-14 91.6
15 TraesCS4D01G196400 chr2A 92.696 575 36 6 134 706 419090694 419091264 0.000000e+00 824.0
16 TraesCS4D01G196400 chr2A 92.267 569 40 4 134 700 139042849 139042283 0.000000e+00 804.0
17 TraesCS4D01G196400 chr1A 92.593 567 38 4 134 698 12865841 12866405 0.000000e+00 811.0
18 TraesCS4D01G196400 chr1A 91.809 586 43 5 112 695 507540539 507539957 0.000000e+00 811.0
19 TraesCS4D01G196400 chr1A 92.416 567 39 4 134 697 562083025 562082460 0.000000e+00 806.0
20 TraesCS4D01G196400 chr6A 92.705 562 40 1 134 694 611336158 611336719 0.000000e+00 809.0
21 TraesCS4D01G196400 chr6A 88.704 301 34 0 5129 5429 107604311 107604011 8.590000e-98 368.0
22 TraesCS4D01G196400 chr6A 71.948 385 88 15 4751 5120 116861780 116861401 1.610000e-15 95.3
23 TraesCS4D01G196400 chr3A 92.267 569 41 3 133 699 467348720 467349287 0.000000e+00 804.0
24 TraesCS4D01G196400 chr3A 91.854 577 42 5 132 705 191959682 191960256 0.000000e+00 800.0
25 TraesCS4D01G196400 chr2B 94.684 301 16 0 5129 5429 448913090 448912790 8.230000e-128 468.0
26 TraesCS4D01G196400 chr2B 75.197 254 41 11 4820 5053 19082270 19082521 3.460000e-17 100.0
27 TraesCS4D01G196400 chr2B 80.315 127 22 3 4774 4898 41385326 41385201 5.790000e-15 93.5
28 TraesCS4D01G196400 chr2B 84.507 71 10 1 4823 4893 683176780 683176711 9.760000e-08 69.4
29 TraesCS4D01G196400 chr5A 93.688 301 19 0 5129 5429 52882728 52882428 8.290000e-123 451.0
30 TraesCS4D01G196400 chr5A 90.698 301 27 1 5129 5429 668985923 668985624 3.050000e-107 399.0
31 TraesCS4D01G196400 chr7A 92.691 301 20 2 5129 5429 250323523 250323821 3.000000e-117 433.0
32 TraesCS4D01G196400 chr7A 88.356 292 31 1 5129 5420 723398060 723398348 1.120000e-91 348.0
33 TraesCS4D01G196400 chr7A 87.692 130 14 2 2346 2473 399043480 399043351 3.390000e-32 150.0
34 TraesCS4D01G196400 chr7A 85.714 126 16 2 2350 2473 505565632 505565507 1.230000e-26 132.0
35 TraesCS4D01G196400 chr1D 91.060 302 25 2 5129 5429 299621650 299621950 1.820000e-109 407.0
36 TraesCS4D01G196400 chr1D 87.291 299 38 0 5131 5429 314059582 314059284 5.210000e-90 342.0
37 TraesCS4D01G196400 chr1D 84.656 189 14 2 2559 2747 421382042 421381869 2.010000e-39 174.0
38 TraesCS4D01G196400 chr5D 90.461 304 26 3 5129 5429 484786601 484786904 1.100000e-106 398.0
39 TraesCS4D01G196400 chr5D 75.862 290 47 12 4787 5056 42862874 42862588 5.710000e-25 126.0
40 TraesCS4D01G196400 chr2D 95.775 71 2 1 2681 2750 221044924 221044994 4.440000e-21 113.0
41 TraesCS4D01G196400 chr6D 77.564 156 28 6 4743 4895 12065674 12065523 2.690000e-13 87.9
42 TraesCS4D01G196400 chr7B 73.000 300 59 14 4773 5052 477777590 477777887 9.690000e-13 86.1
43 TraesCS4D01G196400 chr7B 97.368 38 1 0 21 58 179578084 179578047 1.260000e-06 65.8
44 TraesCS4D01G196400 chr7D 82.474 97 14 2 4819 4914 459939496 459939590 1.250000e-11 82.4
45 TraesCS4D01G196400 chr3B 84.810 79 10 2 29 106 761336966 761336889 1.620000e-10 78.7
46 TraesCS4D01G196400 chr3B 82.278 79 12 2 29 106 761151085 761151008 3.510000e-07 67.6
47 TraesCS4D01G196400 chr3B 82.278 79 12 2 29 106 761174376 761174299 3.510000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G196400 chr4D 341033676 341039104 5428 True 10026.0 10026 100.000 1 5429 1 chr4D.!!$R1 5428
1 TraesCS4D01G196400 chr4B 422525977 422530269 4292 True 1654.0 5022 91.118 696 5111 4 chr4B.!!$R2 4415
2 TraesCS4D01G196400 chr4A 126413992 126418781 4789 False 1340.2 4676 91.730 1 5136 5 chr4A.!!$F3 5135
3 TraesCS4D01G196400 chr4A 530180730 530181302 572 False 808.0 808 92.160 123 693 1 chr4A.!!$F2 570
4 TraesCS4D01G196400 chr2A 419090694 419091264 570 False 824.0 824 92.696 134 706 1 chr2A.!!$F1 572
5 TraesCS4D01G196400 chr2A 139042283 139042849 566 True 804.0 804 92.267 134 700 1 chr2A.!!$R1 566
6 TraesCS4D01G196400 chr1A 12865841 12866405 564 False 811.0 811 92.593 134 698 1 chr1A.!!$F1 564
7 TraesCS4D01G196400 chr1A 507539957 507540539 582 True 811.0 811 91.809 112 695 1 chr1A.!!$R1 583
8 TraesCS4D01G196400 chr1A 562082460 562083025 565 True 806.0 806 92.416 134 697 1 chr1A.!!$R2 563
9 TraesCS4D01G196400 chr6A 611336158 611336719 561 False 809.0 809 92.705 134 694 1 chr6A.!!$F1 560
10 TraesCS4D01G196400 chr3A 467348720 467349287 567 False 804.0 804 92.267 133 699 1 chr3A.!!$F2 566
11 TraesCS4D01G196400 chr3A 191959682 191960256 574 False 800.0 800 91.854 132 705 1 chr3A.!!$F1 573

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
326 328 1.251251 GAACCAACATGCCAGCTCTT 58.749 50.0 0.0 0.0 0.00 2.85 F
1594 1883 0.530744 ATGCTTTGCTGTGCCAGATG 59.469 50.0 6.4 0.0 32.44 2.90 F
2934 3223 0.034477 ATACAGCCCAAACCTTCGGG 60.034 55.0 0.0 0.0 46.15 5.14 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2059 2348 0.613260 TCGCCTCAGTTTGTATGCCT 59.387 50.000 0.0 0.0 0.00 4.75 R
2952 3241 0.038310 CTGGAAGGAGGGGGTTTGAC 59.962 60.000 0.0 0.0 0.00 3.18 R
4927 5301 1.079127 CCGATGTCGCCTCACCTTT 60.079 57.895 0.0 0.0 38.18 3.11 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
44 45 8.582437 ACTGAAAAACACATCATGAAGATTGAT 58.418 29.630 4.68 0.00 33.72 2.57
46 47 9.198837 TGAAAAACACATCATGAAGATTGATTG 57.801 29.630 4.68 0.00 33.72 2.67
81 82 1.961793 TACAATAGTTGCGGGATGCC 58.038 50.000 0.00 0.00 45.60 4.40
91 92 1.568612 GCGGGATGCCATACACGATG 61.569 60.000 3.39 0.00 37.76 3.84
93 94 1.512926 GGGATGCCATACACGATGAC 58.487 55.000 0.00 0.00 37.82 3.06
118 119 9.379791 ACAAAGTATGGCTAGTTAGAAATGTAC 57.620 33.333 0.00 0.00 0.00 2.90
199 201 7.168135 CAGTTTTGCCACTAGAAATTTCAACTC 59.832 37.037 19.99 4.93 0.00 3.01
326 328 1.251251 GAACCAACATGCCAGCTCTT 58.749 50.000 0.00 0.00 0.00 2.85
341 343 5.324409 CCAGCTCTTCCTCTATCTCACTAT 58.676 45.833 0.00 0.00 0.00 2.12
450 452 6.933521 GCCACACTTATCATTGTGAGATAGAT 59.066 38.462 3.30 0.00 45.03 1.98
473 475 2.327325 ACTGACATGTGGGTCTAGGT 57.673 50.000 1.15 0.00 38.61 3.08
482 484 8.164733 TGACATGTGGGTCTAGGTTTATTTTTA 58.835 33.333 1.15 0.00 38.61 1.52
527 529 6.143278 GGTTTGACGTGAAAATAACAATGTCC 59.857 38.462 0.56 0.00 0.00 4.02
554 556 6.286758 TGGCATTTTTGAGCAAACATCTAAA 58.713 32.000 0.00 0.00 0.00 1.85
556 558 6.646240 GGCATTTTTGAGCAAACATCTAAAGA 59.354 34.615 0.00 0.00 0.00 2.52
560 562 8.994429 TTTTTGAGCAAACATCTAAAGAAACA 57.006 26.923 0.00 0.00 0.00 2.83
564 566 7.939782 TGAGCAAACATCTAAAGAAACAATGA 58.060 30.769 0.00 0.00 0.00 2.57
573 575 9.801714 CATCTAAAGAAACAATGACATTTTTGC 57.198 29.630 0.00 0.00 0.00 3.68
600 602 5.726980 TCTAATGGCATTTTTGAGCAAGT 57.273 34.783 19.21 0.00 0.00 3.16
605 607 5.726980 TGGCATTTTTGAGCAAGTATCTT 57.273 34.783 0.00 0.00 0.00 2.40
617 619 4.278669 AGCAAGTATCTTACGGATCGATGT 59.721 41.667 0.54 0.00 35.98 3.06
648 650 9.699703 TTTGAGTAGTTGTAATTTTTAATGGCC 57.300 29.630 0.00 0.00 0.00 5.36
660 663 7.775053 ATTTTTAATGGCCAAACTGAGAGTA 57.225 32.000 10.96 0.00 0.00 2.59
669 672 4.804261 GCCAAACTGAGAGTAGGACACAAT 60.804 45.833 0.00 0.00 0.00 2.71
880 890 2.651455 CCTCCCCTTAATTTCGAACCC 58.349 52.381 0.00 0.00 0.00 4.11
881 891 2.025699 CCTCCCCTTAATTTCGAACCCA 60.026 50.000 0.00 0.00 0.00 4.51
905 916 7.301054 CACAGTGTAGCTTTCCTATTTCAAAG 58.699 38.462 0.00 0.00 33.45 2.77
906 917 6.998673 ACAGTGTAGCTTTCCTATTTCAAAGT 59.001 34.615 0.00 0.00 32.96 2.66
907 918 7.502561 ACAGTGTAGCTTTCCTATTTCAAAGTT 59.497 33.333 0.00 0.00 32.96 2.66
908 919 8.017946 CAGTGTAGCTTTCCTATTTCAAAGTTC 58.982 37.037 0.00 0.00 32.96 3.01
909 920 7.719633 AGTGTAGCTTTCCTATTTCAAAGTTCA 59.280 33.333 0.00 0.00 32.96 3.18
910 921 8.349983 GTGTAGCTTTCCTATTTCAAAGTTCAA 58.650 33.333 0.00 0.00 32.96 2.69
911 922 8.908903 TGTAGCTTTCCTATTTCAAAGTTCAAA 58.091 29.630 0.00 0.00 32.96 2.69
1394 1683 4.202305 GCTTGTCTCTATGCTAGATTGGGT 60.202 45.833 0.00 0.00 33.66 4.51
1398 1687 5.163405 TGTCTCTATGCTAGATTGGGTGTTC 60.163 44.000 0.00 0.00 33.66 3.18
1406 1695 5.774690 TGCTAGATTGGGTGTTCTGAAAATT 59.225 36.000 0.00 0.00 0.00 1.82
1418 1707 0.817013 TGAAAATTCTCGGCATGGGC 59.183 50.000 0.00 0.00 40.13 5.36
1487 1776 1.308783 GCTTGGCTAGTCTGGTTGCC 61.309 60.000 0.00 0.00 45.10 4.52
1514 1803 3.199508 ACAGAAGTTGCTGGCAGAGATAT 59.800 43.478 20.86 0.00 40.20 1.63
1583 1872 8.438676 TCTTAGGTCTTATAAAGATGCTTTGC 57.561 34.615 2.85 0.00 40.18 3.68
1594 1883 0.530744 ATGCTTTGCTGTGCCAGATG 59.469 50.000 6.40 0.00 32.44 2.90
1611 1900 5.180271 CCAGATGTGCCTGCAAAATTTAAT 58.820 37.500 0.00 0.00 32.97 1.40
1813 2102 2.093235 CACAGGTTCAGAAGGATCTCCC 60.093 54.545 0.00 0.00 36.42 4.30
2198 2487 0.609957 CATTGCCAGCCCTGTCTCAA 60.610 55.000 0.00 0.00 0.00 3.02
2212 2501 4.321718 CTGTCTCAATCACCACATCAACT 58.678 43.478 0.00 0.00 0.00 3.16
2383 2672 3.724478 TCTGGGTGTGTATCCTGAGATT 58.276 45.455 0.00 0.00 30.86 2.40
2792 3081 4.451900 CTGGTGTAGTTGAACTTTCCTGT 58.548 43.478 1.97 0.00 0.00 4.00
2829 3118 4.068599 TCATACGTTTCCATCAACTTGCA 58.931 39.130 0.00 0.00 0.00 4.08
2934 3223 0.034477 ATACAGCCCAAACCTTCGGG 60.034 55.000 0.00 0.00 46.15 5.14
2952 3241 2.203394 AGCCCACAACAGCCACAG 60.203 61.111 0.00 0.00 0.00 3.66
3105 3394 3.531538 TGTTCACAGAGTTCAAGGTGAC 58.468 45.455 0.00 0.00 39.75 3.67
3486 3775 1.071699 CCACCGAAAGAGAGGTTTCCA 59.928 52.381 0.00 0.00 39.00 3.53
3704 3995 8.698210 ACTGCCAAATATAATCATTGAACATGT 58.302 29.630 0.00 0.00 0.00 3.21
3724 4015 6.363088 ACATGTATTGTGAAATTGCTGAAACG 59.637 34.615 0.00 0.00 37.11 3.60
3808 4099 0.397941 TGTGAGTGGGAAAGAGCTGG 59.602 55.000 0.00 0.00 0.00 4.85
3990 4290 7.321271 CACACATTTAAGTTAAGTTGAGCTTCG 59.679 37.037 5.77 0.00 38.57 3.79
4002 4302 2.621338 TGAGCTTCGTATCTGCCAAAG 58.379 47.619 0.00 0.00 0.00 2.77
4012 4312 7.477144 TCGTATCTGCCAAAGTATTATTGTG 57.523 36.000 0.00 0.00 0.00 3.33
4053 4353 9.881649 CATGACAATAGTTGCATAGAGGTATAT 57.118 33.333 0.00 0.00 0.00 0.86
4098 4398 6.567959 TCTTGTTTTGTGTTTGTATGCATGA 58.432 32.000 10.16 0.00 0.00 3.07
4104 4404 3.888323 TGTGTTTGTATGCATGACAAGGT 59.112 39.130 10.16 0.00 38.03 3.50
4105 4405 5.066593 TGTGTTTGTATGCATGACAAGGTA 58.933 37.500 10.16 4.31 38.03 3.08
4106 4406 5.532779 TGTGTTTGTATGCATGACAAGGTAA 59.467 36.000 10.16 0.00 38.03 2.85
4107 4407 5.856455 GTGTTTGTATGCATGACAAGGTAAC 59.144 40.000 10.16 10.74 38.03 2.50
4127 4427 8.540397 GGTAACTATTTACTCGAGTAAGTTCG 57.460 38.462 30.46 24.56 41.03 3.95
4128 4428 8.178313 GGTAACTATTTACTCGAGTAAGTTCGT 58.822 37.037 30.46 25.02 41.03 3.85
4129 4429 9.548208 GTAACTATTTACTCGAGTAAGTTCGTT 57.452 33.333 30.46 29.68 41.03 3.85
4130 4430 8.666580 AACTATTTACTCGAGTAAGTTCGTTC 57.333 34.615 30.54 0.00 41.03 3.95
4131 4431 7.810658 ACTATTTACTCGAGTAAGTTCGTTCA 58.189 34.615 30.54 18.19 41.03 3.18
4132 4432 6.924629 ATTTACTCGAGTAAGTTCGTTCAC 57.075 37.500 30.76 0.00 41.03 3.18
4133 4433 3.279853 ACTCGAGTAAGTTCGTTCACC 57.720 47.619 18.46 0.00 41.22 4.02
4134 4434 2.883386 ACTCGAGTAAGTTCGTTCACCT 59.117 45.455 18.46 0.00 41.22 4.00
4135 4435 3.317430 ACTCGAGTAAGTTCGTTCACCTT 59.683 43.478 18.46 0.00 41.22 3.50
4136 4436 4.202090 ACTCGAGTAAGTTCGTTCACCTTT 60.202 41.667 18.46 0.00 41.22 3.11
4137 4437 4.046462 TCGAGTAAGTTCGTTCACCTTTG 58.954 43.478 0.00 0.00 41.22 2.77
4138 4438 3.362693 CGAGTAAGTTCGTTCACCTTTGC 60.363 47.826 0.00 0.00 35.91 3.68
4139 4439 3.805207 AGTAAGTTCGTTCACCTTTGCT 58.195 40.909 0.00 0.00 0.00 3.91
4140 4440 4.196971 AGTAAGTTCGTTCACCTTTGCTT 58.803 39.130 0.00 0.00 0.00 3.91
4141 4441 3.692791 AAGTTCGTTCACCTTTGCTTC 57.307 42.857 0.00 0.00 0.00 3.86
4142 4442 2.919228 AGTTCGTTCACCTTTGCTTCT 58.081 42.857 0.00 0.00 0.00 2.85
4143 4443 2.614057 AGTTCGTTCACCTTTGCTTCTG 59.386 45.455 0.00 0.00 0.00 3.02
4144 4444 2.325583 TCGTTCACCTTTGCTTCTGT 57.674 45.000 0.00 0.00 0.00 3.41
4145 4445 2.639065 TCGTTCACCTTTGCTTCTGTT 58.361 42.857 0.00 0.00 0.00 3.16
4207 4507 4.650972 TTGTTTCATACCTGGGCTAGTT 57.349 40.909 0.00 0.00 0.00 2.24
4234 4570 7.783209 GCAACTTTGCGTCATAAACTTAATTT 58.217 30.769 0.00 0.00 45.11 1.82
4235 4571 8.907685 GCAACTTTGCGTCATAAACTTAATTTA 58.092 29.630 0.00 0.00 45.11 1.40
4365 4701 2.995547 GGCGGTATTGTCAGGGGT 59.004 61.111 0.00 0.00 0.00 4.95
4404 4740 1.468914 GCCTTGAACATCCTTTCCGTC 59.531 52.381 0.00 0.00 0.00 4.79
4466 4802 2.546373 CGTCGGGAGGAAACTGTTGTAA 60.546 50.000 0.00 0.00 44.43 2.41
4487 4823 9.692749 TTGTAATTTGTAGTACTCTGAACTGAG 57.307 33.333 0.00 7.07 39.78 3.35
4635 4971 6.039829 TCTGAGTTGTATCTTACATCGCTGAT 59.960 38.462 0.00 0.00 38.68 2.90
4664 5000 8.177119 TCAAACTCCTTAATGTAATGCTTGTT 57.823 30.769 0.00 0.00 0.00 2.83
4912 5286 5.293560 GCTTATGCTAGTCTCTTTAGGGTG 58.706 45.833 0.00 0.00 36.03 4.61
4921 5295 1.822990 CTCTTTAGGGTGTGCGTCCTA 59.177 52.381 0.00 0.00 34.75 2.94
4924 5298 1.636148 TTAGGGTGTGCGTCCTACTT 58.364 50.000 0.00 0.00 35.56 2.24
4927 5301 1.180029 GGGTGTGCGTCCTACTTAGA 58.820 55.000 0.00 0.00 0.00 2.10
4942 5316 2.567615 ACTTAGAAAGGTGAGGCGACAT 59.432 45.455 0.00 0.00 0.00 3.06
4965 5339 7.439655 ACATCGGCTTCTTGAAGATAGAATAAC 59.560 37.037 13.87 0.00 31.66 1.89
4978 5352 5.774184 AGATAGAATAACGTTCTCCCTACCC 59.226 44.000 2.82 0.00 0.00 3.69
4981 5355 2.610438 TAACGTTCTCCCTACCCAGT 57.390 50.000 2.82 0.00 0.00 4.00
5058 5433 1.408822 GGATCTTGCGGGATTTGGTCT 60.409 52.381 0.00 0.00 0.00 3.85
5061 5436 1.228398 TTGCGGGATTTGGTCTGCA 60.228 52.632 0.00 0.00 36.74 4.41
5078 5453 0.459489 GCACTTGTCTTTGTTGGGCA 59.541 50.000 0.00 0.00 0.00 5.36
5108 5483 1.734465 CTAGCCTTTGTTCTTCTGCGG 59.266 52.381 0.00 0.00 0.00 5.69
5111 5486 0.512952 CCTTTGTTCTTCTGCGGTCG 59.487 55.000 0.00 0.00 0.00 4.79
5115 5490 0.669619 TGTTCTTCTGCGGTCGTGTA 59.330 50.000 0.00 0.00 0.00 2.90
5117 5492 1.918609 GTTCTTCTGCGGTCGTGTATC 59.081 52.381 0.00 0.00 0.00 2.24
5119 5494 2.635714 TCTTCTGCGGTCGTGTATCTA 58.364 47.619 0.00 0.00 0.00 1.98
5129 5504 6.825213 TGCGGTCGTGTATCTATATAGGTTAT 59.175 38.462 9.89 0.00 0.00 1.89
5131 5506 8.279103 GCGGTCGTGTATCTATATAGGTTATAC 58.721 40.741 9.89 10.49 0.00 1.47
5145 5520 7.778185 ATAGGTTATACCCTAGCTTGTACAG 57.222 40.000 2.21 0.00 40.37 2.74
5146 5521 4.900054 AGGTTATACCCTAGCTTGTACAGG 59.100 45.833 0.00 0.00 39.75 4.00
5147 5522 4.897670 GGTTATACCCTAGCTTGTACAGGA 59.102 45.833 9.51 0.00 30.04 3.86
5148 5523 5.543020 GGTTATACCCTAGCTTGTACAGGAT 59.457 44.000 9.51 4.86 30.04 3.24
5149 5524 6.042897 GGTTATACCCTAGCTTGTACAGGATT 59.957 42.308 9.51 0.00 30.04 3.01
5150 5525 3.914426 ACCCTAGCTTGTACAGGATTG 57.086 47.619 9.51 3.28 0.00 2.67
5151 5526 3.182152 ACCCTAGCTTGTACAGGATTGT 58.818 45.455 9.51 0.00 41.39 2.71
5152 5527 3.197983 ACCCTAGCTTGTACAGGATTGTC 59.802 47.826 9.51 0.00 38.76 3.18
5153 5528 3.197766 CCCTAGCTTGTACAGGATTGTCA 59.802 47.826 9.51 0.00 38.76 3.58
5154 5529 4.437239 CCTAGCTTGTACAGGATTGTCAG 58.563 47.826 9.51 0.00 38.76 3.51
5155 5530 4.160439 CCTAGCTTGTACAGGATTGTCAGA 59.840 45.833 9.51 0.00 38.76 3.27
5156 5531 3.931578 AGCTTGTACAGGATTGTCAGAC 58.068 45.455 9.51 0.00 38.76 3.51
5157 5532 3.324846 AGCTTGTACAGGATTGTCAGACA 59.675 43.478 9.51 0.00 38.76 3.41
5158 5533 4.019860 AGCTTGTACAGGATTGTCAGACAT 60.020 41.667 9.51 0.00 38.76 3.06
5159 5534 5.187772 AGCTTGTACAGGATTGTCAGACATA 59.812 40.000 9.51 0.00 38.76 2.29
5160 5535 5.874810 GCTTGTACAGGATTGTCAGACATAA 59.125 40.000 9.51 0.00 38.76 1.90
5161 5536 6.371548 GCTTGTACAGGATTGTCAGACATAAA 59.628 38.462 9.51 0.00 38.76 1.40
5162 5537 7.066284 GCTTGTACAGGATTGTCAGACATAAAT 59.934 37.037 9.51 0.00 38.76 1.40
5163 5538 8.862325 TTGTACAGGATTGTCAGACATAAATT 57.138 30.769 3.45 0.00 38.76 1.82
5164 5539 8.862325 TGTACAGGATTGTCAGACATAAATTT 57.138 30.769 3.45 0.00 38.76 1.82
5165 5540 8.729756 TGTACAGGATTGTCAGACATAAATTTG 58.270 33.333 3.45 1.95 38.76 2.32
5166 5541 7.765695 ACAGGATTGTCAGACATAAATTTGT 57.234 32.000 3.45 2.55 29.46 2.83
5167 5542 8.181904 ACAGGATTGTCAGACATAAATTTGTT 57.818 30.769 3.45 0.00 29.46 2.83
5168 5543 9.295825 ACAGGATTGTCAGACATAAATTTGTTA 57.704 29.630 3.45 0.00 29.46 2.41
5169 5544 9.559958 CAGGATTGTCAGACATAAATTTGTTAC 57.440 33.333 3.45 0.00 0.00 2.50
5170 5545 9.295825 AGGATTGTCAGACATAAATTTGTTACA 57.704 29.630 3.45 0.00 0.00 2.41
5171 5546 9.906660 GGATTGTCAGACATAAATTTGTTACAA 57.093 29.630 3.45 0.00 34.49 2.41
5186 5561 8.647143 ATTTGTTACAATCAAACAAGTTCTGG 57.353 30.769 0.00 0.00 44.94 3.86
5187 5562 6.142818 TGTTACAATCAAACAAGTTCTGGG 57.857 37.500 0.00 0.00 34.04 4.45
5188 5563 3.733443 ACAATCAAACAAGTTCTGGGC 57.267 42.857 0.00 0.00 0.00 5.36
5189 5564 2.365293 ACAATCAAACAAGTTCTGGGCC 59.635 45.455 0.00 0.00 0.00 5.80
5190 5565 2.364970 CAATCAAACAAGTTCTGGGCCA 59.635 45.455 5.85 5.85 0.00 5.36
5191 5566 2.151502 TCAAACAAGTTCTGGGCCAA 57.848 45.000 8.04 0.00 0.00 4.52
5192 5567 2.031120 TCAAACAAGTTCTGGGCCAAG 58.969 47.619 8.04 1.32 0.00 3.61
5193 5568 1.756538 CAAACAAGTTCTGGGCCAAGT 59.243 47.619 8.04 0.00 0.00 3.16
5194 5569 2.955660 CAAACAAGTTCTGGGCCAAGTA 59.044 45.455 8.04 0.00 0.00 2.24
5195 5570 3.306472 AACAAGTTCTGGGCCAAGTAA 57.694 42.857 8.04 0.00 0.00 2.24
5196 5571 3.306472 ACAAGTTCTGGGCCAAGTAAA 57.694 42.857 8.04 0.00 0.00 2.01
5197 5572 2.956333 ACAAGTTCTGGGCCAAGTAAAC 59.044 45.455 8.04 5.26 0.00 2.01
5198 5573 2.287977 AGTTCTGGGCCAAGTAAACC 57.712 50.000 8.04 0.00 0.00 3.27
5199 5574 1.203013 AGTTCTGGGCCAAGTAAACCC 60.203 52.381 8.04 0.00 44.52 4.11
5200 5575 1.154430 TTCTGGGCCAAGTAAACCCT 58.846 50.000 8.04 0.00 44.56 4.34
5201 5576 0.404040 TCTGGGCCAAGTAAACCCTG 59.596 55.000 8.04 0.00 44.56 4.45
5202 5577 0.404040 CTGGGCCAAGTAAACCCTGA 59.596 55.000 8.04 0.00 44.56 3.86
5203 5578 1.005924 CTGGGCCAAGTAAACCCTGAT 59.994 52.381 8.04 0.00 44.56 2.90
5204 5579 2.241176 CTGGGCCAAGTAAACCCTGATA 59.759 50.000 8.04 0.00 44.56 2.15
5205 5580 2.856231 TGGGCCAAGTAAACCCTGATAT 59.144 45.455 2.13 0.00 44.56 1.63
5206 5581 3.270960 TGGGCCAAGTAAACCCTGATATT 59.729 43.478 2.13 0.00 44.56 1.28
5207 5582 4.264623 TGGGCCAAGTAAACCCTGATATTT 60.265 41.667 2.13 0.00 44.56 1.40
5208 5583 4.341235 GGGCCAAGTAAACCCTGATATTTC 59.659 45.833 4.39 0.00 40.75 2.17
5209 5584 5.201243 GGCCAAGTAAACCCTGATATTTCT 58.799 41.667 0.00 0.00 0.00 2.52
5210 5585 5.656859 GGCCAAGTAAACCCTGATATTTCTT 59.343 40.000 0.00 0.00 0.00 2.52
5211 5586 6.154534 GGCCAAGTAAACCCTGATATTTCTTT 59.845 38.462 0.00 0.00 0.00 2.52
5212 5587 7.310423 GGCCAAGTAAACCCTGATATTTCTTTT 60.310 37.037 0.00 0.00 0.00 2.27
5213 5588 7.759886 GCCAAGTAAACCCTGATATTTCTTTTC 59.240 37.037 0.00 0.00 0.00 2.29
5214 5589 7.968405 CCAAGTAAACCCTGATATTTCTTTTCG 59.032 37.037 0.00 0.00 0.00 3.46
5215 5590 8.512138 CAAGTAAACCCTGATATTTCTTTTCGT 58.488 33.333 0.00 0.00 0.00 3.85
5216 5591 9.729281 AAGTAAACCCTGATATTTCTTTTCGTA 57.271 29.630 0.00 0.00 0.00 3.43
5217 5592 9.379791 AGTAAACCCTGATATTTCTTTTCGTAG 57.620 33.333 0.00 0.00 0.00 3.51
5218 5593 7.625828 AAACCCTGATATTTCTTTTCGTAGG 57.374 36.000 0.00 0.00 0.00 3.18
5219 5594 5.681639 ACCCTGATATTTCTTTTCGTAGGG 58.318 41.667 0.00 0.00 46.09 3.53
5220 5595 5.427481 ACCCTGATATTTCTTTTCGTAGGGA 59.573 40.000 12.11 0.00 43.98 4.20
5221 5596 6.101296 ACCCTGATATTTCTTTTCGTAGGGAT 59.899 38.462 12.11 0.00 43.98 3.85
5222 5597 6.651225 CCCTGATATTTCTTTTCGTAGGGATC 59.349 42.308 0.00 0.00 43.98 3.36
5223 5598 7.445945 CCTGATATTTCTTTTCGTAGGGATCT 58.554 38.462 0.00 0.00 0.00 2.75
5224 5599 7.386299 CCTGATATTTCTTTTCGTAGGGATCTG 59.614 40.741 0.00 0.00 0.00 2.90
5225 5600 6.706270 TGATATTTCTTTTCGTAGGGATCTGC 59.294 38.462 0.00 0.00 0.00 4.26
5226 5601 4.553330 TTTCTTTTCGTAGGGATCTGCT 57.447 40.909 0.00 0.00 0.00 4.24
5227 5602 5.670792 TTTCTTTTCGTAGGGATCTGCTA 57.329 39.130 0.00 0.00 0.00 3.49
5228 5603 4.920640 TCTTTTCGTAGGGATCTGCTAG 57.079 45.455 0.00 0.00 0.00 3.42
5229 5604 3.637229 TCTTTTCGTAGGGATCTGCTAGG 59.363 47.826 0.00 0.00 0.00 3.02
5230 5605 3.308035 TTTCGTAGGGATCTGCTAGGA 57.692 47.619 0.00 0.00 0.00 2.94
5231 5606 2.273538 TCGTAGGGATCTGCTAGGAC 57.726 55.000 0.00 0.00 0.00 3.85
5232 5607 1.202903 TCGTAGGGATCTGCTAGGACC 60.203 57.143 0.00 0.00 0.00 4.46
5233 5608 1.202952 CGTAGGGATCTGCTAGGACCT 60.203 57.143 0.00 0.00 0.00 3.85
5234 5609 2.521126 GTAGGGATCTGCTAGGACCTC 58.479 57.143 0.00 0.00 0.00 3.85
5235 5610 0.178975 AGGGATCTGCTAGGACCTCG 60.179 60.000 0.00 0.00 0.00 4.63
5236 5611 0.468400 GGGATCTGCTAGGACCTCGT 60.468 60.000 0.00 0.00 0.00 4.18
5237 5612 1.404843 GGATCTGCTAGGACCTCGTT 58.595 55.000 0.00 0.00 0.00 3.85
5238 5613 1.757699 GGATCTGCTAGGACCTCGTTT 59.242 52.381 0.00 0.00 0.00 3.60
5239 5614 2.482142 GGATCTGCTAGGACCTCGTTTG 60.482 54.545 0.00 0.00 0.00 2.93
5240 5615 0.895530 TCTGCTAGGACCTCGTTTGG 59.104 55.000 0.00 0.00 0.00 3.28
5241 5616 0.741221 CTGCTAGGACCTCGTTTGGC 60.741 60.000 0.00 0.00 0.00 4.52
5242 5617 1.295423 GCTAGGACCTCGTTTGGCA 59.705 57.895 0.00 0.00 0.00 4.92
5243 5618 0.741221 GCTAGGACCTCGTTTGGCAG 60.741 60.000 0.00 0.00 0.00 4.85
5244 5619 0.741221 CTAGGACCTCGTTTGGCAGC 60.741 60.000 0.00 0.00 0.00 5.25
5245 5620 1.476845 TAGGACCTCGTTTGGCAGCA 61.477 55.000 0.00 0.00 0.00 4.41
5246 5621 1.675641 GGACCTCGTTTGGCAGCAT 60.676 57.895 0.00 0.00 0.00 3.79
5247 5622 1.503542 GACCTCGTTTGGCAGCATG 59.496 57.895 0.00 0.00 40.87 4.06
5248 5623 1.926511 GACCTCGTTTGGCAGCATGG 61.927 60.000 0.00 0.00 35.86 3.66
5249 5624 1.675310 CCTCGTTTGGCAGCATGGA 60.675 57.895 0.00 0.00 35.86 3.41
5250 5625 1.243342 CCTCGTTTGGCAGCATGGAA 61.243 55.000 0.00 0.00 35.86 3.53
5251 5626 0.813184 CTCGTTTGGCAGCATGGAAT 59.187 50.000 0.00 0.00 35.86 3.01
5269 5644 6.435430 TGGAATGAATTACTCATCCGTTTG 57.565 37.500 0.00 0.00 44.43 2.93
5270 5645 5.356751 TGGAATGAATTACTCATCCGTTTGG 59.643 40.000 0.00 0.00 44.43 3.28
5281 5656 2.472695 TCCGTTTGGAGGTGATTCAG 57.527 50.000 0.00 0.00 40.17 3.02
5282 5657 0.804989 CCGTTTGGAGGTGATTCAGC 59.195 55.000 7.79 7.79 37.49 4.26
5283 5658 1.611673 CCGTTTGGAGGTGATTCAGCT 60.612 52.381 17.83 17.83 45.28 4.24
5284 5659 1.466167 CGTTTGGAGGTGATTCAGCTG 59.534 52.381 22.28 7.63 42.53 4.24
5285 5660 2.508526 GTTTGGAGGTGATTCAGCTGT 58.491 47.619 22.28 0.00 42.53 4.40
5286 5661 2.479566 TTGGAGGTGATTCAGCTGTC 57.520 50.000 22.28 14.12 42.53 3.51
5287 5662 0.247460 TGGAGGTGATTCAGCTGTCG 59.753 55.000 22.28 0.00 42.53 4.35
5288 5663 0.460987 GGAGGTGATTCAGCTGTCGG 60.461 60.000 22.28 0.00 42.53 4.79
5289 5664 0.532573 GAGGTGATTCAGCTGTCGGA 59.467 55.000 22.28 0.00 42.53 4.55
5290 5665 1.137872 GAGGTGATTCAGCTGTCGGAT 59.862 52.381 22.28 4.07 42.53 4.18
5291 5666 1.134580 AGGTGATTCAGCTGTCGGATG 60.135 52.381 17.16 0.00 40.87 3.51
5292 5667 1.134699 GGTGATTCAGCTGTCGGATGA 60.135 52.381 14.67 0.00 38.70 2.92
5296 5671 1.926561 TTCAGCTGTCGGATGAATCG 58.073 50.000 14.67 0.00 44.12 3.34
5297 5672 0.103026 TCAGCTGTCGGATGAATCGG 59.897 55.000 14.67 0.00 37.41 4.18
5298 5673 0.103026 CAGCTGTCGGATGAATCGGA 59.897 55.000 5.25 0.00 32.28 4.55
5299 5674 1.043816 AGCTGTCGGATGAATCGGAT 58.956 50.000 4.16 0.00 38.22 4.18
5300 5675 2.029918 CAGCTGTCGGATGAATCGGATA 60.030 50.000 5.25 1.47 38.22 2.59
5301 5676 2.828520 AGCTGTCGGATGAATCGGATAT 59.171 45.455 4.16 0.00 38.22 1.63
5302 5677 3.259374 AGCTGTCGGATGAATCGGATATT 59.741 43.478 4.16 0.00 38.22 1.28
5303 5678 3.997021 GCTGTCGGATGAATCGGATATTT 59.003 43.478 4.16 0.00 38.22 1.40
5304 5679 4.452455 GCTGTCGGATGAATCGGATATTTT 59.548 41.667 4.16 0.00 38.22 1.82
5305 5680 5.049405 GCTGTCGGATGAATCGGATATTTTT 60.049 40.000 4.16 0.00 38.22 1.94
5306 5681 6.539649 TGTCGGATGAATCGGATATTTTTC 57.460 37.500 4.16 0.00 38.22 2.29
5307 5682 5.176774 TGTCGGATGAATCGGATATTTTTCG 59.823 40.000 4.16 0.00 38.22 3.46
5308 5683 5.404366 GTCGGATGAATCGGATATTTTTCGA 59.596 40.000 4.16 0.00 38.22 3.71
5309 5684 6.090898 GTCGGATGAATCGGATATTTTTCGAT 59.909 38.462 4.16 0.00 44.19 3.59
5310 5685 6.090763 TCGGATGAATCGGATATTTTTCGATG 59.909 38.462 0.00 0.00 41.91 3.84
5311 5686 6.546395 GGATGAATCGGATATTTTTCGATGG 58.454 40.000 0.00 0.00 41.91 3.51
5312 5687 6.371548 GGATGAATCGGATATTTTTCGATGGA 59.628 38.462 0.00 0.00 41.91 3.41
5313 5688 7.094805 GGATGAATCGGATATTTTTCGATGGAA 60.095 37.037 0.00 0.00 41.91 3.53
5314 5689 7.561021 TGAATCGGATATTTTTCGATGGAAA 57.439 32.000 0.00 0.00 41.91 3.13
5315 5690 8.165239 TGAATCGGATATTTTTCGATGGAAAT 57.835 30.769 3.57 0.00 41.91 2.17
5316 5691 8.629158 TGAATCGGATATTTTTCGATGGAAATT 58.371 29.630 3.57 0.00 41.91 1.82
5317 5692 8.801715 AATCGGATATTTTTCGATGGAAATTG 57.198 30.769 3.57 0.00 41.91 2.32
5318 5693 6.205784 TCGGATATTTTTCGATGGAAATTGC 58.794 36.000 3.57 0.00 41.54 3.56
5319 5694 5.976534 CGGATATTTTTCGATGGAAATTGCA 59.023 36.000 3.57 0.00 41.54 4.08
5320 5695 6.642131 CGGATATTTTTCGATGGAAATTGCAT 59.358 34.615 0.00 0.00 41.54 3.96
5321 5696 7.148918 CGGATATTTTTCGATGGAAATTGCATC 60.149 37.037 16.09 16.09 41.54 3.91
5322 5697 7.652909 GGATATTTTTCGATGGAAATTGCATCA 59.347 33.333 23.55 10.73 44.18 3.07
5323 5698 6.897259 ATTTTTCGATGGAAATTGCATCAG 57.103 33.333 23.55 16.79 44.18 2.90
5324 5699 5.641783 TTTTCGATGGAAATTGCATCAGA 57.358 34.783 23.55 18.40 44.18 3.27
5325 5700 5.641783 TTTCGATGGAAATTGCATCAGAA 57.358 34.783 23.55 21.89 44.18 3.02
5326 5701 5.840243 TTCGATGGAAATTGCATCAGAAT 57.160 34.783 23.55 0.00 44.18 2.40
5327 5702 5.177725 TCGATGGAAATTGCATCAGAATG 57.822 39.130 23.55 9.82 44.18 2.67
5328 5703 4.037089 TCGATGGAAATTGCATCAGAATGG 59.963 41.667 23.55 9.21 44.18 3.16
5329 5704 3.530265 TGGAAATTGCATCAGAATGGC 57.470 42.857 0.00 0.00 36.16 4.40
5330 5705 2.832733 TGGAAATTGCATCAGAATGGCA 59.167 40.909 0.00 0.00 36.16 4.92
5331 5706 3.261137 TGGAAATTGCATCAGAATGGCAA 59.739 39.130 9.22 9.22 36.16 4.52
5332 5707 3.869246 GGAAATTGCATCAGAATGGCAAG 59.131 43.478 11.65 0.00 34.60 4.01
5333 5708 4.501071 GAAATTGCATCAGAATGGCAAGT 58.499 39.130 11.65 7.51 34.60 3.16
5334 5709 4.546829 AATTGCATCAGAATGGCAAGTT 57.453 36.364 11.65 5.68 34.60 2.66
5335 5710 4.546829 ATTGCATCAGAATGGCAAGTTT 57.453 36.364 11.65 0.00 34.60 2.66
5336 5711 4.339872 TTGCATCAGAATGGCAAGTTTT 57.660 36.364 0.00 0.00 36.16 2.43
5337 5712 3.916761 TGCATCAGAATGGCAAGTTTTC 58.083 40.909 0.00 0.00 36.16 2.29
5338 5713 3.321396 TGCATCAGAATGGCAAGTTTTCA 59.679 39.130 0.00 0.00 36.16 2.69
5339 5714 3.924686 GCATCAGAATGGCAAGTTTTCAG 59.075 43.478 0.00 0.00 36.16 3.02
5340 5715 4.560108 GCATCAGAATGGCAAGTTTTCAGT 60.560 41.667 0.00 0.00 36.16 3.41
5341 5716 4.836125 TCAGAATGGCAAGTTTTCAGTC 57.164 40.909 0.00 0.00 36.16 3.51
5342 5717 4.206375 TCAGAATGGCAAGTTTTCAGTCA 58.794 39.130 0.00 0.00 36.16 3.41
5343 5718 4.644234 TCAGAATGGCAAGTTTTCAGTCAA 59.356 37.500 0.00 0.00 36.16 3.18
5344 5719 4.980434 CAGAATGGCAAGTTTTCAGTCAAG 59.020 41.667 0.00 0.00 0.00 3.02
5345 5720 4.646492 AGAATGGCAAGTTTTCAGTCAAGT 59.354 37.500 0.00 0.00 0.00 3.16
5346 5721 4.574599 ATGGCAAGTTTTCAGTCAAGTC 57.425 40.909 0.00 0.00 0.00 3.01
5347 5722 2.687935 TGGCAAGTTTTCAGTCAAGTCC 59.312 45.455 0.00 0.00 0.00 3.85
5348 5723 2.687935 GGCAAGTTTTCAGTCAAGTCCA 59.312 45.455 0.00 0.00 0.00 4.02
5349 5724 3.319122 GGCAAGTTTTCAGTCAAGTCCAT 59.681 43.478 0.00 0.00 0.00 3.41
5350 5725 4.293415 GCAAGTTTTCAGTCAAGTCCATG 58.707 43.478 0.00 0.00 0.00 3.66
5351 5726 4.202050 GCAAGTTTTCAGTCAAGTCCATGT 60.202 41.667 0.00 0.00 0.00 3.21
5352 5727 5.008613 GCAAGTTTTCAGTCAAGTCCATGTA 59.991 40.000 0.00 0.00 0.00 2.29
5353 5728 6.294176 GCAAGTTTTCAGTCAAGTCCATGTAT 60.294 38.462 0.00 0.00 0.00 2.29
5354 5729 6.808008 AGTTTTCAGTCAAGTCCATGTATG 57.192 37.500 0.00 0.00 0.00 2.39
5355 5730 6.533730 AGTTTTCAGTCAAGTCCATGTATGA 58.466 36.000 0.00 0.00 0.00 2.15
5356 5731 7.170965 AGTTTTCAGTCAAGTCCATGTATGAT 58.829 34.615 0.00 0.00 0.00 2.45
5357 5732 6.990341 TTTCAGTCAAGTCCATGTATGATG 57.010 37.500 0.00 0.00 0.00 3.07
5358 5733 4.445453 TCAGTCAAGTCCATGTATGATGC 58.555 43.478 0.00 0.00 0.00 3.91
5359 5734 4.162888 TCAGTCAAGTCCATGTATGATGCT 59.837 41.667 0.00 0.00 0.00 3.79
5360 5735 4.510711 CAGTCAAGTCCATGTATGATGCTC 59.489 45.833 0.00 0.00 0.00 4.26
5361 5736 4.408270 AGTCAAGTCCATGTATGATGCTCT 59.592 41.667 0.00 0.00 0.00 4.09
5362 5737 4.510711 GTCAAGTCCATGTATGATGCTCTG 59.489 45.833 0.00 0.00 0.00 3.35
5363 5738 3.766068 AGTCCATGTATGATGCTCTGG 57.234 47.619 0.00 0.00 0.00 3.86
5364 5739 3.044156 AGTCCATGTATGATGCTCTGGT 58.956 45.455 0.00 0.00 0.00 4.00
5365 5740 3.457380 AGTCCATGTATGATGCTCTGGTT 59.543 43.478 0.00 0.00 0.00 3.67
5366 5741 3.812053 GTCCATGTATGATGCTCTGGTTC 59.188 47.826 0.00 0.00 0.00 3.62
5367 5742 3.455543 TCCATGTATGATGCTCTGGTTCA 59.544 43.478 0.00 0.00 0.00 3.18
5368 5743 4.103627 TCCATGTATGATGCTCTGGTTCAT 59.896 41.667 0.00 0.00 34.60 2.57
5369 5744 5.307716 TCCATGTATGATGCTCTGGTTCATA 59.692 40.000 0.00 0.00 32.58 2.15
5370 5745 5.999600 CCATGTATGATGCTCTGGTTCATAA 59.000 40.000 0.00 0.00 34.93 1.90
5371 5746 6.657966 CCATGTATGATGCTCTGGTTCATAAT 59.342 38.462 0.00 0.00 34.93 1.28
5372 5747 7.361799 CCATGTATGATGCTCTGGTTCATAATG 60.362 40.741 0.00 0.00 34.93 1.90
5373 5748 6.829849 TGTATGATGCTCTGGTTCATAATGA 58.170 36.000 0.00 0.00 34.93 2.57
5374 5749 6.932960 TGTATGATGCTCTGGTTCATAATGAG 59.067 38.462 0.00 0.00 34.93 2.90
5375 5750 4.711399 TGATGCTCTGGTTCATAATGAGG 58.289 43.478 0.00 0.00 0.00 3.86
5376 5751 4.164796 TGATGCTCTGGTTCATAATGAGGT 59.835 41.667 0.00 0.00 0.00 3.85
5377 5752 4.574674 TGCTCTGGTTCATAATGAGGTT 57.425 40.909 0.00 0.00 0.00 3.50
5378 5753 4.517285 TGCTCTGGTTCATAATGAGGTTC 58.483 43.478 0.00 0.00 0.00 3.62
5379 5754 3.879892 GCTCTGGTTCATAATGAGGTTCC 59.120 47.826 0.00 0.00 0.00 3.62
5380 5755 4.626287 GCTCTGGTTCATAATGAGGTTCCA 60.626 45.833 0.00 0.00 0.00 3.53
5381 5756 5.102953 TCTGGTTCATAATGAGGTTCCAG 57.897 43.478 0.00 0.00 41.47 3.86
5382 5757 4.536090 TCTGGTTCATAATGAGGTTCCAGT 59.464 41.667 0.00 0.00 41.07 4.00
5383 5758 5.014123 TCTGGTTCATAATGAGGTTCCAGTT 59.986 40.000 0.00 0.00 41.07 3.16
5384 5759 5.009631 TGGTTCATAATGAGGTTCCAGTTG 58.990 41.667 0.00 0.00 0.00 3.16
5385 5760 5.222027 TGGTTCATAATGAGGTTCCAGTTGA 60.222 40.000 0.00 0.00 0.00 3.18
5386 5761 5.355350 GGTTCATAATGAGGTTCCAGTTGAG 59.645 44.000 0.00 0.00 0.00 3.02
5387 5762 6.173339 GTTCATAATGAGGTTCCAGTTGAGA 58.827 40.000 0.00 0.00 0.00 3.27
5388 5763 6.373005 TCATAATGAGGTTCCAGTTGAGAA 57.627 37.500 0.00 0.00 0.00 2.87
5389 5764 6.173339 TCATAATGAGGTTCCAGTTGAGAAC 58.827 40.000 0.00 0.00 42.36 3.01
5390 5765 4.437682 AATGAGGTTCCAGTTGAGAACA 57.562 40.909 6.04 0.00 44.40 3.18
5391 5766 3.924114 TGAGGTTCCAGTTGAGAACAA 57.076 42.857 6.04 0.00 44.40 2.83
5392 5767 4.229304 TGAGGTTCCAGTTGAGAACAAA 57.771 40.909 6.04 0.00 44.40 2.83
5393 5768 4.594970 TGAGGTTCCAGTTGAGAACAAAA 58.405 39.130 6.04 0.00 44.40 2.44
5394 5769 5.013547 TGAGGTTCCAGTTGAGAACAAAAA 58.986 37.500 6.04 0.00 44.40 1.94
5415 5790 6.866010 AAAATTGTGGAAGCTCAAAATTCC 57.134 33.333 4.49 0.00 44.42 3.01
5416 5791 4.541973 ATTGTGGAAGCTCAAAATTCCC 57.458 40.909 1.74 0.00 43.68 3.97
5417 5792 2.247358 TGTGGAAGCTCAAAATTCCCC 58.753 47.619 1.74 0.00 43.68 4.81
5418 5793 2.158325 TGTGGAAGCTCAAAATTCCCCT 60.158 45.455 1.74 0.00 43.68 4.79
5419 5794 3.075283 TGTGGAAGCTCAAAATTCCCCTA 59.925 43.478 1.74 0.00 43.68 3.53
5420 5795 4.086457 GTGGAAGCTCAAAATTCCCCTAA 58.914 43.478 1.74 0.00 43.68 2.69
5421 5796 4.158579 GTGGAAGCTCAAAATTCCCCTAAG 59.841 45.833 1.74 0.00 43.68 2.18
5422 5797 4.044065 TGGAAGCTCAAAATTCCCCTAAGA 59.956 41.667 1.74 0.00 43.68 2.10
5423 5798 4.642437 GGAAGCTCAAAATTCCCCTAAGAG 59.358 45.833 0.00 0.00 39.29 2.85
5424 5799 4.936685 AGCTCAAAATTCCCCTAAGAGT 57.063 40.909 0.00 0.00 0.00 3.24
5425 5800 4.593956 AGCTCAAAATTCCCCTAAGAGTG 58.406 43.478 0.00 0.00 0.00 3.51
5426 5801 4.289672 AGCTCAAAATTCCCCTAAGAGTGA 59.710 41.667 0.00 0.00 0.00 3.41
5427 5802 5.010282 GCTCAAAATTCCCCTAAGAGTGAA 58.990 41.667 0.00 0.00 0.00 3.18
5428 5803 5.124617 GCTCAAAATTCCCCTAAGAGTGAAG 59.875 44.000 0.00 0.00 0.00 3.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 7.183580 TGTGTTTTTCAGTGGTTTCTTTTTG 57.816 32.000 0.00 0.00 0.00 2.44
49 50 9.424319 CCGCAACTATTGTAAGACATATTATCT 57.576 33.333 0.00 0.00 0.00 1.98
58 59 3.002348 GCATCCCGCAACTATTGTAAGAC 59.998 47.826 0.00 0.00 41.79 3.01
64 65 1.321474 ATGGCATCCCGCAACTATTG 58.679 50.000 0.00 0.00 45.17 1.90
74 75 1.202639 TGTCATCGTGTATGGCATCCC 60.203 52.381 1.65 0.00 45.25 3.85
81 82 4.811024 AGCCATACTTTGTCATCGTGTATG 59.189 41.667 0.00 0.00 39.75 2.39
91 92 8.494016 ACATTTCTAACTAGCCATACTTTGTC 57.506 34.615 0.00 0.00 0.00 3.18
93 94 9.601217 AGTACATTTCTAACTAGCCATACTTTG 57.399 33.333 0.00 0.00 0.00 2.77
127 128 9.525826 TGGCATAAATGATAAAAACCCAAAAAT 57.474 25.926 0.00 0.00 0.00 1.82
130 131 6.881602 GGTGGCATAAATGATAAAAACCCAAA 59.118 34.615 0.00 0.00 0.00 3.28
199 201 2.669434 CGAAGCAATGGCATTTTTGAGG 59.331 45.455 10.65 0.00 44.61 3.86
302 304 2.025981 AGCTGGCATGTTGGTTCATAGA 60.026 45.455 0.00 0.00 0.00 1.98
341 343 4.230964 ACAAGTGGGCCCCATACTTTATTA 59.769 41.667 22.27 0.00 35.28 0.98
406 408 2.241430 GGCCCCACTTGTTAGGAGTAAT 59.759 50.000 0.00 0.00 0.00 1.89
450 452 4.023980 CCTAGACCCACATGTCAGTTCTA 58.976 47.826 0.00 0.00 37.73 2.10
482 484 5.304686 ACCCGTTGACCATGTTATATGAT 57.695 39.130 0.00 0.00 0.00 2.45
527 529 4.815040 TGTTTGCTCAAAAATGCCATTG 57.185 36.364 0.00 0.00 31.33 2.82
554 556 8.246180 AGATATCGCAAAAATGTCATTGTTTCT 58.754 29.630 0.00 0.00 0.00 2.52
556 558 9.853555 TTAGATATCGCAAAAATGTCATTGTTT 57.146 25.926 0.00 0.21 0.00 2.83
560 562 7.596248 GCCATTAGATATCGCAAAAATGTCATT 59.404 33.333 0.00 0.00 0.00 2.57
564 566 6.389830 TGCCATTAGATATCGCAAAAATGT 57.610 33.333 0.00 0.00 0.00 2.71
573 575 6.671190 TGCTCAAAAATGCCATTAGATATCG 58.329 36.000 0.00 0.00 0.00 2.92
600 602 7.923878 TCAAAAATGACATCGATCCGTAAGATA 59.076 33.333 0.00 0.00 43.02 1.98
605 607 5.416083 ACTCAAAAATGACATCGATCCGTA 58.584 37.500 0.00 0.00 0.00 4.02
640 642 4.534500 TCCTACTCTCAGTTTGGCCATTAA 59.466 41.667 6.09 0.00 0.00 1.40
648 650 7.116948 CACTAATTGTGTCCTACTCTCAGTTTG 59.883 40.741 0.00 0.00 41.53 2.93
660 663 6.186957 TCATTTATGCCACTAATTGTGTCCT 58.813 36.000 7.09 0.00 44.81 3.85
669 672 8.367660 TGGGTTTTTATCATTTATGCCACTAA 57.632 30.769 0.00 0.00 0.00 2.24
880 890 6.801539 TTGAAATAGGAAAGCTACACTGTG 57.198 37.500 6.19 6.19 0.00 3.66
881 891 6.998673 ACTTTGAAATAGGAAAGCTACACTGT 59.001 34.615 0.00 0.00 33.25 3.55
905 916 0.603975 AGGGAGCGAGCTGTTTGAAC 60.604 55.000 0.84 0.00 0.00 3.18
906 917 0.603707 CAGGGAGCGAGCTGTTTGAA 60.604 55.000 0.84 0.00 0.00 2.69
907 918 1.004560 CAGGGAGCGAGCTGTTTGA 60.005 57.895 0.84 0.00 0.00 2.69
908 919 1.294659 GACAGGGAGCGAGCTGTTTG 61.295 60.000 0.84 0.25 0.00 2.93
909 920 1.004440 GACAGGGAGCGAGCTGTTT 60.004 57.895 0.84 0.00 0.00 2.83
910 921 2.659610 GACAGGGAGCGAGCTGTT 59.340 61.111 0.84 0.00 0.00 3.16
911 922 3.753434 CGACAGGGAGCGAGCTGT 61.753 66.667 0.84 0.00 0.00 4.40
1293 1575 0.911769 CCCTCCCTGTGATAACAGCA 59.088 55.000 4.45 0.00 36.46 4.41
1394 1683 3.191162 CCATGCCGAGAATTTTCAGAACA 59.809 43.478 0.00 0.00 0.00 3.18
1398 1687 1.202336 GCCCATGCCGAGAATTTTCAG 60.202 52.381 0.00 0.00 0.00 3.02
1487 1776 1.954528 CCAGCAACTTCTGTGCCAG 59.045 57.895 0.00 0.00 32.32 4.85
1514 1803 7.920160 TTATTAGATGTGCATGAAAGTGTGA 57.080 32.000 0.00 0.00 0.00 3.58
1594 1883 4.201485 CGACGAATTAAATTTTGCAGGCAC 60.201 41.667 0.00 0.00 0.00 5.01
1611 1900 1.202371 ACACTGAAAGAGCACGACGAA 60.202 47.619 0.00 0.00 37.43 3.85
1663 1952 1.670811 AGTGTCAAAAGTGCGACAAGG 59.329 47.619 0.00 0.00 43.40 3.61
1798 2087 2.130193 CCCATGGGAGATCCTTCTGAA 58.870 52.381 28.27 0.00 37.50 3.02
1813 2102 1.619654 TCTTGGTTTGCTCACCCATG 58.380 50.000 2.77 0.00 35.73 3.66
2059 2348 0.613260 TCGCCTCAGTTTGTATGCCT 59.387 50.000 0.00 0.00 0.00 4.75
2198 2487 2.562296 AGGGGTAGTTGATGTGGTGAT 58.438 47.619 0.00 0.00 0.00 3.06
2212 2501 1.272807 GTGTAGCACCAGAAGGGGTA 58.727 55.000 0.00 0.00 41.86 3.69
2383 2672 0.874390 GATTGTTTCGCCACTGCTCA 59.126 50.000 0.00 0.00 34.43 4.26
2792 3081 7.170320 GGAAACGTATGAACAGACAAGACTAAA 59.830 37.037 0.00 0.00 0.00 1.85
2934 3223 2.203337 TGTGGCTGTTGTGGGCTC 60.203 61.111 0.00 0.00 0.00 4.70
2952 3241 0.038310 CTGGAAGGAGGGGGTTTGAC 59.962 60.000 0.00 0.00 0.00 3.18
3486 3775 7.714377 CCAGATATCAAAGCAACATACTTCTCT 59.286 37.037 5.32 0.00 0.00 3.10
3704 3995 5.471797 TCTCCGTTTCAGCAATTTCACAATA 59.528 36.000 0.00 0.00 0.00 1.90
3724 4015 5.867716 TGTTGCGTCTCTTATTAAACTCTCC 59.132 40.000 0.00 0.00 0.00 3.71
3740 4031 5.516090 TCCTTTAACTTTCAATGTTGCGTC 58.484 37.500 0.00 0.00 0.00 5.19
3808 4099 8.120465 CCACTTGTTATAACACGAAACATATCC 58.880 37.037 24.27 0.00 38.92 2.59
3931 4223 3.765511 CCACTCCATGTCAAAATCACCAT 59.234 43.478 0.00 0.00 0.00 3.55
3932 4224 3.156293 CCACTCCATGTCAAAATCACCA 58.844 45.455 0.00 0.00 0.00 4.17
3934 4226 4.853924 AACCACTCCATGTCAAAATCAC 57.146 40.909 0.00 0.00 0.00 3.06
3975 4275 4.033014 GGCAGATACGAAGCTCAACTTAAC 59.967 45.833 0.00 0.00 39.29 2.01
3990 4290 8.458843 ACAACACAATAATACTTTGGCAGATAC 58.541 33.333 0.00 0.00 0.00 2.24
4002 4302 8.879759 TGCTAAGCTAGAACAACACAATAATAC 58.120 33.333 0.00 0.00 0.00 1.89
4012 4312 5.862924 TTGTCATGCTAAGCTAGAACAAC 57.137 39.130 0.00 0.00 0.00 3.32
4053 4353 9.453572 ACAAGAAGAGTGCATCTAATTGATTTA 57.546 29.630 18.90 0.00 37.23 1.40
4055 4355 7.934855 ACAAGAAGAGTGCATCTAATTGATT 57.065 32.000 18.90 5.95 37.23 2.57
4056 4356 7.934855 AACAAGAAGAGTGCATCTAATTGAT 57.065 32.000 18.90 11.29 37.23 2.57
4057 4357 7.750229 AAACAAGAAGAGTGCATCTAATTGA 57.250 32.000 18.90 0.00 37.23 2.57
4058 4358 7.864379 ACAAAACAAGAAGAGTGCATCTAATTG 59.136 33.333 14.60 14.60 37.23 2.32
4059 4359 7.864379 CACAAAACAAGAAGAGTGCATCTAATT 59.136 33.333 0.00 0.00 37.23 1.40
4060 4360 7.013655 ACACAAAACAAGAAGAGTGCATCTAAT 59.986 33.333 0.00 0.00 37.23 1.73
4061 4361 6.318648 ACACAAAACAAGAAGAGTGCATCTAA 59.681 34.615 0.00 0.00 37.23 2.10
4062 4362 5.822519 ACACAAAACAAGAAGAGTGCATCTA 59.177 36.000 0.00 0.00 37.23 1.98
4098 4398 9.018582 ACTTACTCGAGTAAATAGTTACCTTGT 57.981 33.333 31.72 20.68 40.55 3.16
4104 4404 9.760660 GAACGAACTTACTCGAGTAAATAGTTA 57.239 33.333 31.72 13.67 41.44 2.24
4105 4405 8.292448 TGAACGAACTTACTCGAGTAAATAGTT 58.708 33.333 31.72 30.04 41.44 2.24
4106 4406 7.748241 GTGAACGAACTTACTCGAGTAAATAGT 59.252 37.037 31.72 25.00 41.44 2.12
4107 4407 7.217825 GGTGAACGAACTTACTCGAGTAAATAG 59.782 40.741 31.72 24.43 41.44 1.73
4108 4408 7.023575 GGTGAACGAACTTACTCGAGTAAATA 58.976 38.462 31.72 15.63 41.44 1.40
4109 4409 5.860716 GGTGAACGAACTTACTCGAGTAAAT 59.139 40.000 31.72 23.58 41.44 1.40
4110 4410 5.009010 AGGTGAACGAACTTACTCGAGTAAA 59.991 40.000 31.72 18.96 41.44 2.01
4111 4411 4.516698 AGGTGAACGAACTTACTCGAGTAA 59.483 41.667 30.65 30.65 41.44 2.24
4112 4412 4.067896 AGGTGAACGAACTTACTCGAGTA 58.932 43.478 21.25 21.25 41.44 2.59
4113 4413 2.883386 AGGTGAACGAACTTACTCGAGT 59.117 45.455 23.66 23.66 41.44 4.18
4114 4414 3.555917 AGGTGAACGAACTTACTCGAG 57.444 47.619 11.84 11.84 41.44 4.04
4115 4415 3.996150 AAGGTGAACGAACTTACTCGA 57.004 42.857 0.00 0.00 41.44 4.04
4116 4416 3.362693 GCAAAGGTGAACGAACTTACTCG 60.363 47.826 0.00 0.00 44.50 4.18
4117 4417 3.808174 AGCAAAGGTGAACGAACTTACTC 59.192 43.478 0.00 0.00 0.00 2.59
4118 4418 3.805207 AGCAAAGGTGAACGAACTTACT 58.195 40.909 0.00 0.00 0.00 2.24
4119 4419 4.272748 AGAAGCAAAGGTGAACGAACTTAC 59.727 41.667 0.00 0.00 0.00 2.34
4120 4420 4.272504 CAGAAGCAAAGGTGAACGAACTTA 59.727 41.667 0.00 0.00 0.00 2.24
4121 4421 3.065371 CAGAAGCAAAGGTGAACGAACTT 59.935 43.478 0.00 0.00 0.00 2.66
4122 4422 2.614057 CAGAAGCAAAGGTGAACGAACT 59.386 45.455 0.00 0.00 0.00 3.01
4123 4423 2.354821 ACAGAAGCAAAGGTGAACGAAC 59.645 45.455 0.00 0.00 0.00 3.95
4124 4424 2.639065 ACAGAAGCAAAGGTGAACGAA 58.361 42.857 0.00 0.00 0.00 3.85
4125 4425 2.325583 ACAGAAGCAAAGGTGAACGA 57.674 45.000 0.00 0.00 0.00 3.85
4126 4426 3.420839 AAACAGAAGCAAAGGTGAACG 57.579 42.857 0.00 0.00 0.00 3.95
4163 4463 9.558396 ACAATTCATAAATGGTGAACATGTTTT 57.442 25.926 13.36 4.38 40.44 2.43
4216 4516 9.426837 ACACTACTAAATTAAGTTTATGACGCA 57.573 29.630 0.00 0.00 32.12 5.24
4263 4599 4.454847 TGGAAAGTCAAAACACGTGTGTAA 59.545 37.500 24.16 5.82 44.13 2.41
4404 4740 3.118334 AGCTCTCCATGTCTGAATCAAGG 60.118 47.826 0.00 0.00 0.00 3.61
4466 4802 6.017192 TCCCTCAGTTCAGAGTACTACAAAT 58.983 40.000 0.00 0.00 33.75 2.32
4487 4823 9.981460 AACTGGGATATTCATAATTTATCTCCC 57.019 33.333 0.00 0.00 40.22 4.30
4521 4857 4.917385 TGCTGGTGTTGATAACAAGGTAT 58.083 39.130 0.00 0.00 44.16 2.73
4626 4962 3.438087 AGGAGTTTGAACAATCAGCGATG 59.562 43.478 0.00 0.00 36.78 3.84
4635 4971 8.177119 AGCATTACATTAAGGAGTTTGAACAA 57.823 30.769 0.00 0.00 0.00 2.83
4664 5000 8.049117 AGATGATGTAGTAGGAAATTCAAGCAA 58.951 33.333 0.00 0.00 0.00 3.91
4880 5254 2.388890 CTAGCATAAGCCCTGCCGCT 62.389 60.000 0.00 0.00 43.56 5.52
4890 5264 6.276847 CACACCCTAAAGAGACTAGCATAAG 58.723 44.000 0.00 0.00 0.00 1.73
4912 5286 3.057033 TCACCTTTCTAAGTAGGACGCAC 60.057 47.826 0.00 0.00 35.45 5.34
4921 5295 1.968493 TGTCGCCTCACCTTTCTAAGT 59.032 47.619 0.00 0.00 0.00 2.24
4924 5298 1.134367 CGATGTCGCCTCACCTTTCTA 59.866 52.381 0.00 0.00 0.00 2.10
4927 5301 1.079127 CCGATGTCGCCTCACCTTT 60.079 57.895 0.00 0.00 38.18 3.11
4942 5316 5.977725 CGTTATTCTATCTTCAAGAAGCCGA 59.022 40.000 4.95 0.00 36.46 5.54
4965 5339 0.324460 AGGACTGGGTAGGGAGAACG 60.324 60.000 0.00 0.00 0.00 3.95
4978 5352 4.135153 CCGCTGGGACGAGGACTG 62.135 72.222 0.00 0.00 34.06 3.51
5058 5433 0.459489 GCCCAACAAAGACAAGTGCA 59.541 50.000 0.00 0.00 0.00 4.57
5061 5436 1.069049 GCATGCCCAACAAAGACAAGT 59.931 47.619 6.36 0.00 0.00 3.16
5078 5453 1.210478 ACAAAGGCTAGATCCACGCAT 59.790 47.619 0.00 0.00 0.00 4.73
5108 5483 9.844257 AGGGTATAACCTATATAGATACACGAC 57.156 37.037 7.84 4.19 39.65 4.34
5119 5494 9.476928 CTGTACAAGCTAGGGTATAACCTATAT 57.523 37.037 17.11 6.10 42.03 0.86
5129 5504 4.359105 ACAATCCTGTACAAGCTAGGGTA 58.641 43.478 0.00 0.00 32.54 3.69
5131 5506 3.197766 TGACAATCCTGTACAAGCTAGGG 59.802 47.826 0.00 0.00 35.30 3.53
5136 5511 3.664107 TGTCTGACAATCCTGTACAAGC 58.336 45.455 8.27 0.00 35.30 4.01
5137 5512 7.905604 TTTATGTCTGACAATCCTGTACAAG 57.094 36.000 15.31 0.00 35.30 3.16
5138 5513 8.862325 AATTTATGTCTGACAATCCTGTACAA 57.138 30.769 15.31 0.70 35.30 2.41
5139 5514 8.729756 CAAATTTATGTCTGACAATCCTGTACA 58.270 33.333 15.31 0.00 35.30 2.90
5140 5515 8.730680 ACAAATTTATGTCTGACAATCCTGTAC 58.269 33.333 15.31 0.00 35.30 2.90
5141 5516 8.862325 ACAAATTTATGTCTGACAATCCTGTA 57.138 30.769 15.31 0.00 35.30 2.74
5142 5517 7.765695 ACAAATTTATGTCTGACAATCCTGT 57.234 32.000 15.31 10.41 38.98 4.00
5143 5518 9.559958 GTAACAAATTTATGTCTGACAATCCTG 57.440 33.333 15.31 9.83 31.81 3.86
5144 5519 9.295825 TGTAACAAATTTATGTCTGACAATCCT 57.704 29.630 15.31 0.43 31.81 3.24
5145 5520 9.906660 TTGTAACAAATTTATGTCTGACAATCC 57.093 29.630 15.31 0.00 31.19 3.01
5160 5535 9.097257 CCAGAACTTGTTTGATTGTAACAAATT 57.903 29.630 0.00 0.00 42.87 1.82
5161 5536 7.710475 CCCAGAACTTGTTTGATTGTAACAAAT 59.290 33.333 0.00 0.00 42.87 2.32
5162 5537 7.038659 CCCAGAACTTGTTTGATTGTAACAAA 58.961 34.615 0.00 0.00 42.87 2.83
5163 5538 6.568869 CCCAGAACTTGTTTGATTGTAACAA 58.431 36.000 0.00 0.00 41.69 2.83
5164 5539 5.451242 GCCCAGAACTTGTTTGATTGTAACA 60.451 40.000 0.00 0.00 33.92 2.41
5165 5540 4.982295 GCCCAGAACTTGTTTGATTGTAAC 59.018 41.667 0.00 0.00 0.00 2.50
5166 5541 4.038642 GGCCCAGAACTTGTTTGATTGTAA 59.961 41.667 0.00 0.00 0.00 2.41
5167 5542 3.572255 GGCCCAGAACTTGTTTGATTGTA 59.428 43.478 0.00 0.00 0.00 2.41
5168 5543 2.365293 GGCCCAGAACTTGTTTGATTGT 59.635 45.455 0.00 0.00 0.00 2.71
5169 5544 2.364970 TGGCCCAGAACTTGTTTGATTG 59.635 45.455 0.00 0.00 0.00 2.67
5170 5545 2.676748 TGGCCCAGAACTTGTTTGATT 58.323 42.857 0.00 0.00 0.00 2.57
5171 5546 2.380064 TGGCCCAGAACTTGTTTGAT 57.620 45.000 0.00 0.00 0.00 2.57
5172 5547 2.031120 CTTGGCCCAGAACTTGTTTGA 58.969 47.619 0.00 0.00 0.00 2.69
5173 5548 1.756538 ACTTGGCCCAGAACTTGTTTG 59.243 47.619 11.55 0.00 0.00 2.93
5174 5549 2.159179 ACTTGGCCCAGAACTTGTTT 57.841 45.000 11.55 0.00 0.00 2.83
5175 5550 3.306472 TTACTTGGCCCAGAACTTGTT 57.694 42.857 11.55 0.00 0.00 2.83
5176 5551 2.956333 GTTTACTTGGCCCAGAACTTGT 59.044 45.455 11.55 0.00 0.00 3.16
5177 5552 2.296190 GGTTTACTTGGCCCAGAACTTG 59.704 50.000 11.55 0.00 0.00 3.16
5178 5553 2.594131 GGTTTACTTGGCCCAGAACTT 58.406 47.619 11.55 0.00 0.00 2.66
5179 5554 1.203013 GGGTTTACTTGGCCCAGAACT 60.203 52.381 11.55 0.00 41.93 3.01
5180 5555 1.203013 AGGGTTTACTTGGCCCAGAAC 60.203 52.381 11.55 5.38 44.69 3.01
5181 5556 1.154430 AGGGTTTACTTGGCCCAGAA 58.846 50.000 11.55 0.00 44.69 3.02
5182 5557 0.404040 CAGGGTTTACTTGGCCCAGA 59.596 55.000 11.55 0.00 44.69 3.86
5183 5558 0.404040 TCAGGGTTTACTTGGCCCAG 59.596 55.000 0.00 0.00 44.69 4.45
5184 5559 1.080638 ATCAGGGTTTACTTGGCCCA 58.919 50.000 0.00 0.00 44.69 5.36
5185 5560 3.595190 ATATCAGGGTTTACTTGGCCC 57.405 47.619 0.00 0.00 42.64 5.80
5186 5561 5.201243 AGAAATATCAGGGTTTACTTGGCC 58.799 41.667 0.00 0.00 0.00 5.36
5187 5562 6.775594 AAGAAATATCAGGGTTTACTTGGC 57.224 37.500 0.00 0.00 0.00 4.52
5188 5563 7.968405 CGAAAAGAAATATCAGGGTTTACTTGG 59.032 37.037 0.00 0.00 0.00 3.61
5189 5564 8.512138 ACGAAAAGAAATATCAGGGTTTACTTG 58.488 33.333 0.00 0.00 0.00 3.16
5190 5565 8.631480 ACGAAAAGAAATATCAGGGTTTACTT 57.369 30.769 0.00 0.00 0.00 2.24
5191 5566 9.379791 CTACGAAAAGAAATATCAGGGTTTACT 57.620 33.333 0.00 0.00 0.00 2.24
5192 5567 8.610035 CCTACGAAAAGAAATATCAGGGTTTAC 58.390 37.037 0.00 0.00 0.00 2.01
5193 5568 7.771826 CCCTACGAAAAGAAATATCAGGGTTTA 59.228 37.037 0.00 0.00 36.28 2.01
5194 5569 6.602009 CCCTACGAAAAGAAATATCAGGGTTT 59.398 38.462 0.00 0.00 36.28 3.27
5195 5570 6.069847 TCCCTACGAAAAGAAATATCAGGGTT 60.070 38.462 0.00 0.00 40.91 4.11
5196 5571 5.427481 TCCCTACGAAAAGAAATATCAGGGT 59.573 40.000 0.00 0.00 40.91 4.34
5197 5572 5.925509 TCCCTACGAAAAGAAATATCAGGG 58.074 41.667 0.00 0.00 41.37 4.45
5198 5573 7.386299 CAGATCCCTACGAAAAGAAATATCAGG 59.614 40.741 0.00 0.00 0.00 3.86
5199 5574 7.095439 GCAGATCCCTACGAAAAGAAATATCAG 60.095 40.741 0.00 0.00 0.00 2.90
5200 5575 6.706270 GCAGATCCCTACGAAAAGAAATATCA 59.294 38.462 0.00 0.00 0.00 2.15
5201 5576 6.931840 AGCAGATCCCTACGAAAAGAAATATC 59.068 38.462 0.00 0.00 0.00 1.63
5202 5577 6.831976 AGCAGATCCCTACGAAAAGAAATAT 58.168 36.000 0.00 0.00 0.00 1.28
5203 5578 6.235231 AGCAGATCCCTACGAAAAGAAATA 57.765 37.500 0.00 0.00 0.00 1.40
5204 5579 5.104259 AGCAGATCCCTACGAAAAGAAAT 57.896 39.130 0.00 0.00 0.00 2.17
5205 5580 4.553330 AGCAGATCCCTACGAAAAGAAA 57.447 40.909 0.00 0.00 0.00 2.52
5206 5581 4.099573 CCTAGCAGATCCCTACGAAAAGAA 59.900 45.833 0.00 0.00 0.00 2.52
5207 5582 3.637229 CCTAGCAGATCCCTACGAAAAGA 59.363 47.826 0.00 0.00 0.00 2.52
5208 5583 3.637229 TCCTAGCAGATCCCTACGAAAAG 59.363 47.826 0.00 0.00 0.00 2.27
5209 5584 3.383825 GTCCTAGCAGATCCCTACGAAAA 59.616 47.826 0.00 0.00 0.00 2.29
5210 5585 2.957006 GTCCTAGCAGATCCCTACGAAA 59.043 50.000 0.00 0.00 0.00 3.46
5211 5586 2.584236 GTCCTAGCAGATCCCTACGAA 58.416 52.381 0.00 0.00 0.00 3.85
5212 5587 1.202903 GGTCCTAGCAGATCCCTACGA 60.203 57.143 0.00 0.00 0.00 3.43
5213 5588 1.202952 AGGTCCTAGCAGATCCCTACG 60.203 57.143 0.00 0.00 0.00 3.51
5214 5589 2.521126 GAGGTCCTAGCAGATCCCTAC 58.479 57.143 0.00 0.00 0.00 3.18
5215 5590 1.074084 CGAGGTCCTAGCAGATCCCTA 59.926 57.143 0.00 0.00 0.00 3.53
5216 5591 0.178975 CGAGGTCCTAGCAGATCCCT 60.179 60.000 0.00 0.00 0.00 4.20
5217 5592 0.468400 ACGAGGTCCTAGCAGATCCC 60.468 60.000 0.00 0.00 0.00 3.85
5218 5593 1.404843 AACGAGGTCCTAGCAGATCC 58.595 55.000 0.00 0.00 0.00 3.36
5219 5594 2.482142 CCAAACGAGGTCCTAGCAGATC 60.482 54.545 0.00 0.00 0.00 2.75
5220 5595 1.482593 CCAAACGAGGTCCTAGCAGAT 59.517 52.381 0.00 0.00 0.00 2.90
5221 5596 0.895530 CCAAACGAGGTCCTAGCAGA 59.104 55.000 0.00 0.00 0.00 4.26
5222 5597 0.741221 GCCAAACGAGGTCCTAGCAG 60.741 60.000 0.00 0.00 0.00 4.24
5223 5598 1.295423 GCCAAACGAGGTCCTAGCA 59.705 57.895 0.00 0.00 0.00 3.49
5224 5599 0.741221 CTGCCAAACGAGGTCCTAGC 60.741 60.000 0.00 0.00 0.00 3.42
5225 5600 0.741221 GCTGCCAAACGAGGTCCTAG 60.741 60.000 0.00 0.00 0.00 3.02
5226 5601 1.295423 GCTGCCAAACGAGGTCCTA 59.705 57.895 0.00 0.00 0.00 2.94
5227 5602 2.032681 GCTGCCAAACGAGGTCCT 59.967 61.111 0.00 0.00 0.00 3.85
5228 5603 1.675641 ATGCTGCCAAACGAGGTCC 60.676 57.895 0.00 0.00 0.00 4.46
5229 5604 1.503542 CATGCTGCCAAACGAGGTC 59.496 57.895 0.00 0.00 0.00 3.85
5230 5605 1.973281 CCATGCTGCCAAACGAGGT 60.973 57.895 0.00 0.00 0.00 3.85
5231 5606 1.243342 TTCCATGCTGCCAAACGAGG 61.243 55.000 0.00 0.00 0.00 4.63
5232 5607 0.813184 ATTCCATGCTGCCAAACGAG 59.187 50.000 0.00 0.00 0.00 4.18
5233 5608 0.527113 CATTCCATGCTGCCAAACGA 59.473 50.000 0.00 0.00 0.00 3.85
5234 5609 0.527113 TCATTCCATGCTGCCAAACG 59.473 50.000 0.00 0.00 0.00 3.60
5235 5610 2.747396 TTCATTCCATGCTGCCAAAC 57.253 45.000 0.00 0.00 0.00 2.93
5236 5611 3.985019 AATTCATTCCATGCTGCCAAA 57.015 38.095 0.00 0.00 0.00 3.28
5237 5612 4.025360 AGTAATTCATTCCATGCTGCCAA 58.975 39.130 0.00 0.00 0.00 4.52
5238 5613 3.633525 GAGTAATTCATTCCATGCTGCCA 59.366 43.478 0.00 0.00 0.00 4.92
5239 5614 3.633525 TGAGTAATTCATTCCATGCTGCC 59.366 43.478 0.00 0.00 0.00 4.85
5240 5615 4.906065 TGAGTAATTCATTCCATGCTGC 57.094 40.909 0.00 0.00 0.00 5.25
5241 5616 5.334646 CGGATGAGTAATTCATTCCATGCTG 60.335 44.000 0.00 0.00 46.51 4.41
5242 5617 4.758674 CGGATGAGTAATTCATTCCATGCT 59.241 41.667 0.00 0.00 46.51 3.79
5243 5618 4.516698 ACGGATGAGTAATTCATTCCATGC 59.483 41.667 0.00 0.00 46.51 4.06
5244 5619 6.624352 AACGGATGAGTAATTCATTCCATG 57.376 37.500 0.00 0.00 46.51 3.66
5245 5620 6.039717 CCAAACGGATGAGTAATTCATTCCAT 59.960 38.462 0.00 0.00 46.51 3.41
5246 5621 5.356751 CCAAACGGATGAGTAATTCATTCCA 59.643 40.000 0.00 0.00 46.51 3.53
5247 5622 5.588648 TCCAAACGGATGAGTAATTCATTCC 59.411 40.000 0.00 0.00 46.51 3.01
5248 5623 6.238484 CCTCCAAACGGATGAGTAATTCATTC 60.238 42.308 0.00 0.00 46.51 2.67
5249 5624 5.590259 CCTCCAAACGGATGAGTAATTCATT 59.410 40.000 0.00 0.00 46.51 2.57
5251 5626 4.019681 ACCTCCAAACGGATGAGTAATTCA 60.020 41.667 0.00 0.00 40.85 2.57
5252 5627 4.332819 CACCTCCAAACGGATGAGTAATTC 59.667 45.833 0.00 0.00 30.13 2.17
5253 5628 4.019681 TCACCTCCAAACGGATGAGTAATT 60.020 41.667 0.00 0.00 30.13 1.40
5254 5629 3.517901 TCACCTCCAAACGGATGAGTAAT 59.482 43.478 0.00 0.00 30.13 1.89
5255 5630 2.901192 TCACCTCCAAACGGATGAGTAA 59.099 45.455 0.00 0.00 30.13 2.24
5256 5631 2.531771 TCACCTCCAAACGGATGAGTA 58.468 47.619 0.00 0.00 30.13 2.59
5257 5632 1.348064 TCACCTCCAAACGGATGAGT 58.652 50.000 0.00 0.00 30.13 3.41
5258 5633 2.698855 ATCACCTCCAAACGGATGAG 57.301 50.000 0.00 0.00 30.13 2.90
5259 5634 2.304470 TGAATCACCTCCAAACGGATGA 59.696 45.455 0.00 0.00 30.13 2.92
5260 5635 2.679837 CTGAATCACCTCCAAACGGATG 59.320 50.000 0.00 0.00 30.13 3.51
5261 5636 2.941415 GCTGAATCACCTCCAAACGGAT 60.941 50.000 0.00 0.00 30.13 4.18
5262 5637 1.610624 GCTGAATCACCTCCAAACGGA 60.611 52.381 0.00 0.00 0.00 4.69
5263 5638 0.804989 GCTGAATCACCTCCAAACGG 59.195 55.000 0.00 0.00 0.00 4.44
5264 5639 1.466167 CAGCTGAATCACCTCCAAACG 59.534 52.381 8.42 0.00 0.00 3.60
5265 5640 2.485814 GACAGCTGAATCACCTCCAAAC 59.514 50.000 23.35 0.00 0.00 2.93
5266 5641 2.783135 GACAGCTGAATCACCTCCAAA 58.217 47.619 23.35 0.00 0.00 3.28
5267 5642 1.338105 CGACAGCTGAATCACCTCCAA 60.338 52.381 23.35 0.00 0.00 3.53
5268 5643 0.247460 CGACAGCTGAATCACCTCCA 59.753 55.000 23.35 0.00 0.00 3.86
5269 5644 0.460987 CCGACAGCTGAATCACCTCC 60.461 60.000 23.35 0.00 0.00 4.30
5270 5645 0.532573 TCCGACAGCTGAATCACCTC 59.467 55.000 23.35 4.27 0.00 3.85
5271 5646 1.134580 CATCCGACAGCTGAATCACCT 60.135 52.381 23.35 0.00 0.00 4.00
5272 5647 1.134699 TCATCCGACAGCTGAATCACC 60.135 52.381 23.35 1.06 0.00 4.02
5273 5648 2.299993 TCATCCGACAGCTGAATCAC 57.700 50.000 23.35 5.24 0.00 3.06
5274 5649 3.548745 ATTCATCCGACAGCTGAATCA 57.451 42.857 23.35 1.29 35.28 2.57
5275 5650 2.474359 CGATTCATCCGACAGCTGAATC 59.526 50.000 23.35 15.57 46.02 2.52
5276 5651 2.477825 CGATTCATCCGACAGCTGAAT 58.522 47.619 23.35 7.83 41.14 2.57
5277 5652 1.471501 CCGATTCATCCGACAGCTGAA 60.472 52.381 23.35 2.23 33.75 3.02
5278 5653 0.103026 CCGATTCATCCGACAGCTGA 59.897 55.000 23.35 0.00 0.00 4.26
5279 5654 0.103026 TCCGATTCATCCGACAGCTG 59.897 55.000 13.48 13.48 0.00 4.24
5280 5655 1.043816 ATCCGATTCATCCGACAGCT 58.956 50.000 0.00 0.00 0.00 4.24
5281 5656 2.724977 TATCCGATTCATCCGACAGC 57.275 50.000 0.00 0.00 0.00 4.40
5282 5657 6.545504 AAAAATATCCGATTCATCCGACAG 57.454 37.500 0.00 0.00 0.00 3.51
5283 5658 5.176774 CGAAAAATATCCGATTCATCCGACA 59.823 40.000 0.00 0.00 0.00 4.35
5284 5659 5.404366 TCGAAAAATATCCGATTCATCCGAC 59.596 40.000 0.00 0.00 0.00 4.79
5285 5660 5.534407 TCGAAAAATATCCGATTCATCCGA 58.466 37.500 0.00 0.00 0.00 4.55
5286 5661 5.839262 TCGAAAAATATCCGATTCATCCG 57.161 39.130 0.00 0.00 0.00 4.18
5287 5662 6.371548 TCCATCGAAAAATATCCGATTCATCC 59.628 38.462 0.00 0.00 40.54 3.51
5288 5663 7.364522 TCCATCGAAAAATATCCGATTCATC 57.635 36.000 0.00 0.00 40.54 2.92
5289 5664 7.744087 TTCCATCGAAAAATATCCGATTCAT 57.256 32.000 0.00 0.00 40.54 2.57
5290 5665 7.561021 TTTCCATCGAAAAATATCCGATTCA 57.439 32.000 0.00 0.00 40.54 2.57
5291 5666 8.905702 CAATTTCCATCGAAAAATATCCGATTC 58.094 33.333 0.00 0.00 41.25 2.52
5292 5667 7.382218 GCAATTTCCATCGAAAAATATCCGATT 59.618 33.333 0.00 0.00 41.25 3.34
5293 5668 6.863126 GCAATTTCCATCGAAAAATATCCGAT 59.137 34.615 0.00 0.00 41.25 4.18
5294 5669 6.183360 TGCAATTTCCATCGAAAAATATCCGA 60.183 34.615 0.00 0.00 41.25 4.55
5295 5670 5.976534 TGCAATTTCCATCGAAAAATATCCG 59.023 36.000 0.00 0.00 41.25 4.18
5296 5671 7.652909 TGATGCAATTTCCATCGAAAAATATCC 59.347 33.333 0.00 0.00 41.25 2.59
5297 5672 8.578308 TGATGCAATTTCCATCGAAAAATATC 57.422 30.769 0.00 0.00 41.25 1.63
5298 5673 8.415553 TCTGATGCAATTTCCATCGAAAAATAT 58.584 29.630 0.00 0.00 41.25 1.28
5299 5674 7.770201 TCTGATGCAATTTCCATCGAAAAATA 58.230 30.769 0.00 0.00 41.25 1.40
5300 5675 6.632909 TCTGATGCAATTTCCATCGAAAAAT 58.367 32.000 0.00 0.00 41.25 1.82
5301 5676 6.023357 TCTGATGCAATTTCCATCGAAAAA 57.977 33.333 0.00 0.00 41.25 1.94
5302 5677 5.641783 TCTGATGCAATTTCCATCGAAAA 57.358 34.783 0.00 0.00 41.25 2.29
5303 5678 5.641783 TTCTGATGCAATTTCCATCGAAA 57.358 34.783 0.00 0.00 41.48 3.46
5304 5679 5.450826 CCATTCTGATGCAATTTCCATCGAA 60.451 40.000 16.24 16.24 41.48 3.71
5305 5680 4.037089 CCATTCTGATGCAATTTCCATCGA 59.963 41.667 0.00 0.00 41.48 3.59
5306 5681 4.295870 CCATTCTGATGCAATTTCCATCG 58.704 43.478 0.00 6.45 41.48 3.84
5307 5682 4.056050 GCCATTCTGATGCAATTTCCATC 58.944 43.478 0.00 8.31 39.56 3.51
5308 5683 3.452990 TGCCATTCTGATGCAATTTCCAT 59.547 39.130 0.00 0.00 31.67 3.41
5309 5684 2.832733 TGCCATTCTGATGCAATTTCCA 59.167 40.909 0.00 0.00 31.67 3.53
5310 5685 3.530265 TGCCATTCTGATGCAATTTCC 57.470 42.857 0.00 0.00 31.67 3.13
5311 5686 4.501071 ACTTGCCATTCTGATGCAATTTC 58.499 39.130 9.29 0.00 32.69 2.17
5312 5687 4.546829 ACTTGCCATTCTGATGCAATTT 57.453 36.364 9.29 0.40 32.69 1.82
5313 5688 4.546829 AACTTGCCATTCTGATGCAATT 57.453 36.364 9.29 3.32 32.69 2.32
5314 5689 4.546829 AAACTTGCCATTCTGATGCAAT 57.453 36.364 9.29 0.00 32.69 3.56
5315 5690 4.202233 TGAAAACTTGCCATTCTGATGCAA 60.202 37.500 0.00 8.73 32.40 4.08
5316 5691 3.321396 TGAAAACTTGCCATTCTGATGCA 59.679 39.130 0.00 0.00 31.67 3.96
5317 5692 3.916761 TGAAAACTTGCCATTCTGATGC 58.083 40.909 0.00 0.00 31.67 3.91
5318 5693 5.130292 ACTGAAAACTTGCCATTCTGATG 57.870 39.130 0.00 0.00 0.00 3.07
5319 5694 4.828939 TGACTGAAAACTTGCCATTCTGAT 59.171 37.500 0.00 0.00 0.00 2.90
5320 5695 4.206375 TGACTGAAAACTTGCCATTCTGA 58.794 39.130 0.00 0.00 0.00 3.27
5321 5696 4.572985 TGACTGAAAACTTGCCATTCTG 57.427 40.909 0.00 0.00 0.00 3.02
5322 5697 4.646492 ACTTGACTGAAAACTTGCCATTCT 59.354 37.500 0.00 0.00 0.00 2.40
5323 5698 4.936891 ACTTGACTGAAAACTTGCCATTC 58.063 39.130 0.00 0.00 0.00 2.67
5324 5699 4.202151 GGACTTGACTGAAAACTTGCCATT 60.202 41.667 0.00 0.00 0.00 3.16
5325 5700 3.319122 GGACTTGACTGAAAACTTGCCAT 59.681 43.478 0.00 0.00 0.00 4.40
5326 5701 2.687935 GGACTTGACTGAAAACTTGCCA 59.312 45.455 0.00 0.00 0.00 4.92
5327 5702 2.687935 TGGACTTGACTGAAAACTTGCC 59.312 45.455 0.00 0.00 0.00 4.52
5328 5703 4.202050 ACATGGACTTGACTGAAAACTTGC 60.202 41.667 0.00 0.00 0.00 4.01
5329 5704 5.505173 ACATGGACTTGACTGAAAACTTG 57.495 39.130 0.00 0.00 0.00 3.16
5330 5705 6.998074 TCATACATGGACTTGACTGAAAACTT 59.002 34.615 0.00 0.00 0.00 2.66
5331 5706 6.533730 TCATACATGGACTTGACTGAAAACT 58.466 36.000 0.00 0.00 0.00 2.66
5332 5707 6.801539 TCATACATGGACTTGACTGAAAAC 57.198 37.500 0.00 0.00 0.00 2.43
5333 5708 6.127925 GCATCATACATGGACTTGACTGAAAA 60.128 38.462 0.00 0.00 0.00 2.29
5334 5709 5.355071 GCATCATACATGGACTTGACTGAAA 59.645 40.000 0.00 0.00 0.00 2.69
5335 5710 4.877823 GCATCATACATGGACTTGACTGAA 59.122 41.667 0.00 0.00 0.00 3.02
5336 5711 4.162888 AGCATCATACATGGACTTGACTGA 59.837 41.667 0.00 0.00 0.00 3.41
5337 5712 4.449131 AGCATCATACATGGACTTGACTG 58.551 43.478 0.00 0.00 0.00 3.51
5338 5713 4.408270 AGAGCATCATACATGGACTTGACT 59.592 41.667 0.00 0.00 37.82 3.41
5339 5714 4.510711 CAGAGCATCATACATGGACTTGAC 59.489 45.833 0.00 0.00 37.82 3.18
5340 5715 4.443881 CCAGAGCATCATACATGGACTTGA 60.444 45.833 0.00 0.00 37.82 3.02
5341 5716 3.813724 CCAGAGCATCATACATGGACTTG 59.186 47.826 0.00 0.00 37.82 3.16
5342 5717 3.457380 ACCAGAGCATCATACATGGACTT 59.543 43.478 0.00 0.00 37.82 3.01
5343 5718 3.044156 ACCAGAGCATCATACATGGACT 58.956 45.455 0.00 0.00 37.82 3.85
5344 5719 3.482156 ACCAGAGCATCATACATGGAC 57.518 47.619 0.00 0.00 37.82 4.02
5345 5720 3.455543 TGAACCAGAGCATCATACATGGA 59.544 43.478 0.00 0.00 37.82 3.41
5346 5721 3.812262 TGAACCAGAGCATCATACATGG 58.188 45.455 0.00 0.00 37.82 3.66
5347 5722 7.389607 TCATTATGAACCAGAGCATCATACATG 59.610 37.037 0.00 0.00 36.17 3.21
5348 5723 7.455891 TCATTATGAACCAGAGCATCATACAT 58.544 34.615 0.00 0.00 36.17 2.29
5349 5724 6.829849 TCATTATGAACCAGAGCATCATACA 58.170 36.000 0.00 0.00 36.17 2.29
5350 5725 6.370994 CCTCATTATGAACCAGAGCATCATAC 59.629 42.308 0.00 0.00 36.17 2.39
5351 5726 6.043590 ACCTCATTATGAACCAGAGCATCATA 59.956 38.462 0.00 0.00 37.82 2.15
5352 5727 5.163120 ACCTCATTATGAACCAGAGCATCAT 60.163 40.000 0.00 0.00 37.82 2.45
5353 5728 4.164796 ACCTCATTATGAACCAGAGCATCA 59.835 41.667 0.00 0.00 37.82 3.07
5354 5729 4.712476 ACCTCATTATGAACCAGAGCATC 58.288 43.478 0.00 0.00 0.00 3.91
5355 5730 4.785346 ACCTCATTATGAACCAGAGCAT 57.215 40.909 0.00 0.00 0.00 3.79
5356 5731 4.517285 GAACCTCATTATGAACCAGAGCA 58.483 43.478 0.00 0.00 0.00 4.26
5357 5732 3.879892 GGAACCTCATTATGAACCAGAGC 59.120 47.826 0.00 0.00 0.00 4.09
5358 5733 5.102953 TGGAACCTCATTATGAACCAGAG 57.897 43.478 0.00 0.00 0.00 3.35
5359 5734 4.536090 ACTGGAACCTCATTATGAACCAGA 59.464 41.667 26.92 6.13 44.08 3.86
5360 5735 4.848357 ACTGGAACCTCATTATGAACCAG 58.152 43.478 22.61 22.61 45.93 4.00
5361 5736 4.927267 ACTGGAACCTCATTATGAACCA 57.073 40.909 0.00 3.69 0.00 3.67
5362 5737 5.253330 TCAACTGGAACCTCATTATGAACC 58.747 41.667 0.00 0.00 0.00 3.62
5363 5738 6.173339 TCTCAACTGGAACCTCATTATGAAC 58.827 40.000 0.00 0.00 0.00 3.18
5364 5739 6.373005 TCTCAACTGGAACCTCATTATGAA 57.627 37.500 0.00 0.00 0.00 2.57
5365 5740 6.173339 GTTCTCAACTGGAACCTCATTATGA 58.827 40.000 0.00 0.00 37.63 2.15
5366 5741 5.939883 TGTTCTCAACTGGAACCTCATTATG 59.060 40.000 0.00 0.00 41.42 1.90
5367 5742 6.126863 TGTTCTCAACTGGAACCTCATTAT 57.873 37.500 0.00 0.00 41.42 1.28
5368 5743 5.560722 TGTTCTCAACTGGAACCTCATTA 57.439 39.130 0.00 0.00 41.42 1.90
5369 5744 4.437682 TGTTCTCAACTGGAACCTCATT 57.562 40.909 0.00 0.00 41.42 2.57
5370 5745 4.437682 TTGTTCTCAACTGGAACCTCAT 57.562 40.909 0.00 0.00 41.42 2.90
5371 5746 3.924114 TTGTTCTCAACTGGAACCTCA 57.076 42.857 0.00 0.00 41.42 3.86
5372 5747 5.576447 TTTTTGTTCTCAACTGGAACCTC 57.424 39.130 0.00 0.00 41.42 3.85
5391 5766 6.262944 GGGAATTTTGAGCTTCCACAATTTTT 59.737 34.615 2.42 0.00 42.29 1.94
5392 5767 5.764686 GGGAATTTTGAGCTTCCACAATTTT 59.235 36.000 2.42 0.00 42.29 1.82
5393 5768 5.308014 GGGAATTTTGAGCTTCCACAATTT 58.692 37.500 2.42 0.00 42.29 1.82
5394 5769 4.263025 GGGGAATTTTGAGCTTCCACAATT 60.263 41.667 2.42 1.40 43.24 2.32
5395 5770 3.261643 GGGGAATTTTGAGCTTCCACAAT 59.738 43.478 2.42 0.00 43.24 2.71
5396 5771 2.632512 GGGGAATTTTGAGCTTCCACAA 59.367 45.455 2.42 0.00 43.24 3.33
5397 5772 2.158325 AGGGGAATTTTGAGCTTCCACA 60.158 45.455 4.96 0.00 45.66 4.17
5398 5773 2.529632 AGGGGAATTTTGAGCTTCCAC 58.470 47.619 2.42 0.00 43.94 4.02
5399 5774 2.999185 AGGGGAATTTTGAGCTTCCA 57.001 45.000 2.42 0.00 42.29 3.53
5400 5775 4.600062 TCTTAGGGGAATTTTGAGCTTCC 58.400 43.478 0.00 0.00 40.22 3.46
5401 5776 5.124617 CACTCTTAGGGGAATTTTGAGCTTC 59.875 44.000 0.00 0.00 0.00 3.86
5402 5777 5.012893 CACTCTTAGGGGAATTTTGAGCTT 58.987 41.667 0.00 0.00 0.00 3.74
5403 5778 4.289672 TCACTCTTAGGGGAATTTTGAGCT 59.710 41.667 0.00 0.00 0.00 4.09
5404 5779 4.589908 TCACTCTTAGGGGAATTTTGAGC 58.410 43.478 0.00 0.00 0.00 4.26
5405 5780 6.749923 CTTCACTCTTAGGGGAATTTTGAG 57.250 41.667 0.00 0.00 0.00 3.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.