Multiple sequence alignment - TraesCS4D01G195500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G195500 chr4D 100.000 1439 0 0 1501 2939 339079144 339080582 0.000000e+00 2658.0
1 TraesCS4D01G195500 chr4D 100.000 1075 0 0 1 1075 339077644 339078718 0.000000e+00 1986.0
2 TraesCS4D01G195500 chr4A 91.931 1103 51 10 1 1070 132992619 132991522 0.000000e+00 1509.0
3 TraesCS4D01G195500 chr4A 92.627 746 29 15 1501 2224 132991440 132990699 0.000000e+00 1050.0
4 TraesCS4D01G195500 chr4A 94.468 470 15 3 2480 2939 132989160 132988692 0.000000e+00 713.0
5 TraesCS4D01G195500 chr4A 93.122 189 13 0 2306 2494 132990700 132990512 8.020000e-71 278.0
6 TraesCS4D01G195500 chr4B 93.023 731 28 12 1506 2218 418521130 418521855 0.000000e+00 1046.0
7 TraesCS4D01G195500 chr4B 91.638 287 16 3 2618 2898 418522712 418522996 9.880000e-105 390.0
8 TraesCS4D01G195500 chr4B 92.218 257 16 2 1 257 418520255 418520507 7.740000e-96 361.0
9 TraesCS4D01G195500 chr4B 79.335 571 65 26 537 1070 418520496 418521050 4.660000e-93 351.0
10 TraesCS4D01G195500 chr4B 91.573 178 14 1 2306 2483 418521865 418522041 8.140000e-61 244.0
11 TraesCS4D01G195500 chr2B 91.111 45 3 1 1976 2020 713701080 713701123 3.160000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G195500 chr4D 339077644 339080582 2938 False 2322.0 2658 100.0000 1 2939 2 chr4D.!!$F1 2938
1 TraesCS4D01G195500 chr4A 132988692 132992619 3927 True 887.5 1509 93.0370 1 2939 4 chr4A.!!$R1 2938
2 TraesCS4D01G195500 chr4B 418520255 418522996 2741 False 478.4 1046 89.5574 1 2898 5 chr4B.!!$F1 2897

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
815 880 0.179056 GCTACCAGATAAGGCGGCAA 60.179 55.0 13.08 0.0 32.21 4.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2478 2580 0.03918 TAGGAACTGGAGAGGCGACA 59.961 55.0 0.0 0.0 41.52 4.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
82 86 3.911661 GACACACCGTCTTGTAGTACT 57.088 47.619 0.00 0.00 41.81 2.73
156 165 9.677567 TTCTGTATCTTAAACTTGTGAAATTGC 57.322 29.630 0.00 0.00 0.00 3.56
163 172 2.462889 ACTTGTGAAATTGCTTGCACG 58.537 42.857 0.00 0.00 34.12 5.34
170 179 3.493877 TGAAATTGCTTGCACGGAATTTG 59.506 39.130 30.70 0.00 42.46 2.32
184 193 7.655328 TGCACGGAATTTGAAATTACTGAATTT 59.345 29.630 10.84 0.00 45.88 1.82
285 294 0.250510 TCGTTGGTGGCAACTGCATA 60.251 50.000 3.27 0.00 44.36 3.14
287 296 0.243636 GTTGGTGGCAACTGCATACC 59.756 55.000 16.25 16.25 44.72 2.73
313 322 4.410400 GAACACCTCCGCCTGGGG 62.410 72.222 3.33 3.33 36.01 4.96
340 349 2.424842 TTTCAGAAGGCCCCGTGCAT 62.425 55.000 0.00 0.00 43.89 3.96
344 353 2.519302 AAGGCCCCGTGCATATGC 60.519 61.111 21.09 21.09 43.89 3.14
348 357 1.227823 GCCCCGTGCATATGCTGTA 60.228 57.895 27.13 5.65 42.66 2.74
357 366 3.750130 GTGCATATGCTGTATCCTTGGAG 59.250 47.826 27.13 0.00 42.66 3.86
403 412 2.798976 TGCCTGCACATGTTTTTCTC 57.201 45.000 0.00 0.00 0.00 2.87
427 436 6.646240 TCTTTTCTTTTCCAATTAGCACATGC 59.354 34.615 0.00 0.00 42.49 4.06
475 507 3.767673 TGGGTAGTTTCAGCTAGATCGTT 59.232 43.478 0.00 0.00 0.00 3.85
477 509 4.098196 GGGTAGTTTCAGCTAGATCGTTCT 59.902 45.833 0.97 0.97 35.90 3.01
493 525 0.620556 TTCTGAACTCCCAGATGCCC 59.379 55.000 0.00 0.00 42.18 5.36
511 543 6.616959 AGATGCCCATAGCCAGAACATATATA 59.383 38.462 0.00 0.00 42.71 0.86
639 671 1.335964 GGCCAGAAAGAAAAAGACCGC 60.336 52.381 0.00 0.00 0.00 5.68
646 678 1.884235 AGAAAAAGACCGCCTCTGTG 58.116 50.000 0.00 0.00 0.00 3.66
726 771 0.669625 GCGTAGAACAAGGCTCCGTT 60.670 55.000 2.20 2.20 0.00 4.44
815 880 0.179056 GCTACCAGATAAGGCGGCAA 60.179 55.000 13.08 0.00 32.21 4.52
818 883 1.271840 ACCAGATAAGGCGGCAAGGA 61.272 55.000 13.08 0.00 0.00 3.36
830 895 2.478539 GCGGCAAGGAATGTTGAGATTC 60.479 50.000 0.00 0.00 0.00 2.52
846 911 5.275630 TGAGATTCCTTTGATCTCCTCTCA 58.724 41.667 10.59 0.00 39.90 3.27
847 912 5.723405 TGAGATTCCTTTGATCTCCTCTCAA 59.277 40.000 10.59 0.00 39.90 3.02
866 935 3.076621 CAATTGTCTGTTCTGCTGGCTA 58.923 45.455 0.00 0.00 0.00 3.93
929 999 0.729116 CTTGGTGGCATCGATCACAC 59.271 55.000 16.43 16.59 35.74 3.82
930 1000 0.324614 TTGGTGGCATCGATCACACT 59.675 50.000 21.58 0.00 35.74 3.55
931 1001 0.391528 TGGTGGCATCGATCACACTG 60.392 55.000 21.58 3.46 35.74 3.66
1624 1695 6.847956 TTCTTCACCTTTGAATTTTGCATG 57.152 33.333 0.00 0.00 41.05 4.06
1794 1865 2.490509 TCAATCGACGCCAAGAGAGTAA 59.509 45.455 0.00 0.00 0.00 2.24
1952 2044 4.275689 GCCATCGTGATTCATAACCAATCA 59.724 41.667 0.00 0.00 37.82 2.57
1955 2047 6.429078 CCATCGTGATTCATAACCAATCATCT 59.571 38.462 0.00 0.00 41.26 2.90
1981 2079 1.135774 TCGAGCGTGTGATGTAGTGTC 60.136 52.381 0.00 0.00 0.00 3.67
1990 2088 3.002862 TGTGATGTAGTGTCAAAAACGCC 59.997 43.478 0.00 0.00 39.30 5.68
1992 2090 3.880490 TGATGTAGTGTCAAAAACGCCTT 59.120 39.130 0.00 0.00 39.30 4.35
1993 2091 5.049954 GTGATGTAGTGTCAAAAACGCCTTA 60.050 40.000 0.00 0.00 39.30 2.69
2140 2238 5.008331 TGGACGGATACATGTATCTACTCC 58.992 45.833 33.88 30.73 41.20 3.85
2141 2239 5.222068 TGGACGGATACATGTATCTACTCCT 60.222 44.000 33.88 15.89 41.20 3.69
2142 2240 6.013119 TGGACGGATACATGTATCTACTCCTA 60.013 42.308 33.88 22.81 41.20 2.94
2143 2241 6.315891 GGACGGATACATGTATCTACTCCTAC 59.684 46.154 33.88 19.51 41.20 3.18
2168 2270 6.103222 ACTTAGTTTTAATTCCGTGATCGC 57.897 37.500 0.00 0.00 35.54 4.58
2221 2323 1.831389 CGCCAGCGCCATACATGTAC 61.831 60.000 7.96 0.00 0.00 2.90
2223 2325 1.270094 GCCAGCGCCATACATGTACTA 60.270 52.381 7.96 0.00 0.00 1.82
2225 2327 3.664107 CCAGCGCCATACATGTACTATT 58.336 45.455 7.96 0.00 0.00 1.73
2227 2329 3.679980 CAGCGCCATACATGTACTATTCC 59.320 47.826 7.96 0.00 0.00 3.01
2228 2330 3.578716 AGCGCCATACATGTACTATTCCT 59.421 43.478 7.96 0.00 0.00 3.36
2229 2331 4.040461 AGCGCCATACATGTACTATTCCTT 59.960 41.667 7.96 0.00 0.00 3.36
2230 2332 4.755123 GCGCCATACATGTACTATTCCTTT 59.245 41.667 7.96 0.00 0.00 3.11
2231 2333 5.238650 GCGCCATACATGTACTATTCCTTTT 59.761 40.000 7.96 0.00 0.00 2.27
2232 2334 6.425721 GCGCCATACATGTACTATTCCTTTTA 59.574 38.462 7.96 0.00 0.00 1.52
2233 2335 7.360101 GCGCCATACATGTACTATTCCTTTTAG 60.360 40.741 7.96 0.00 0.00 1.85
2234 2336 7.656137 CGCCATACATGTACTATTCCTTTTAGT 59.344 37.037 7.96 0.00 34.40 2.24
2235 2337 8.989980 GCCATACATGTACTATTCCTTTTAGTC 58.010 37.037 7.96 0.00 32.35 2.59
2299 2401 6.811253 AAAAGTCTTACATTATTGGACGCA 57.189 33.333 0.00 0.00 32.86 5.24
2300 2402 6.422776 AAAGTCTTACATTATTGGACGCAG 57.577 37.500 0.00 0.00 32.86 5.18
2301 2403 4.442706 AGTCTTACATTATTGGACGCAGG 58.557 43.478 0.00 0.00 32.86 4.85
2302 2404 4.161565 AGTCTTACATTATTGGACGCAGGA 59.838 41.667 0.00 0.00 32.86 3.86
2303 2405 4.873827 GTCTTACATTATTGGACGCAGGAA 59.126 41.667 0.00 0.00 0.00 3.36
2304 2406 5.006746 GTCTTACATTATTGGACGCAGGAAG 59.993 44.000 0.00 0.00 0.00 3.46
2377 2479 2.356125 GGGCTGAATGGTGCTAAGAGAA 60.356 50.000 0.00 0.00 0.00 2.87
2476 2578 2.755952 AGTTCCCTTTTCCACTTGCT 57.244 45.000 0.00 0.00 0.00 3.91
2478 2580 4.388577 AGTTCCCTTTTCCACTTGCTAT 57.611 40.909 0.00 0.00 0.00 2.97
2565 4033 4.038642 CCTATAAACAGAGACAGGAGCCTC 59.961 50.000 0.00 0.00 0.00 4.70
2590 4058 5.833082 AGTGTAGCATCAACTAACTATCCG 58.167 41.667 0.00 0.00 0.00 4.18
2762 4808 3.180891 GGACTTTCCAGGTCCTTATCG 57.819 52.381 5.72 0.00 46.89 2.92
2795 4841 3.964875 CAACGCAAAGCAGCCCGT 61.965 61.111 0.00 0.00 35.14 5.28
2846 4902 1.073216 CGTGCTGACGCTACCTTCTG 61.073 60.000 0.00 0.00 39.10 3.02
2859 4916 3.003173 TTCTGCTCCGTCCAGGGG 61.003 66.667 0.00 0.00 45.86 4.79
2883 4940 1.005340 GAGAGGAGCAAACATCAGCG 58.995 55.000 0.00 0.00 35.48 5.18
2931 4988 8.429641 ACTCTTATCTTTTAACCAGTTGACTGA 58.570 33.333 12.54 0.00 46.59 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
103 107 3.187700 GCGGTAGAATCCAGTGTTACAG 58.812 50.000 0.00 0.00 0.00 2.74
156 165 6.148948 TCAGTAATTTCAAATTCCGTGCAAG 58.851 36.000 0.00 0.00 0.00 4.01
170 179 8.462016 AGTATGCCTGTCAAATTCAGTAATTTC 58.538 33.333 0.00 0.00 42.18 2.17
184 193 1.827344 CACTCTGGAGTATGCCTGTCA 59.173 52.381 2.75 0.00 40.20 3.58
285 294 1.073706 AGGTGTTCAGGACCCAGGT 60.074 57.895 0.00 0.00 33.51 4.00
287 296 1.679898 GGAGGTGTTCAGGACCCAG 59.320 63.158 0.00 0.00 33.51 4.45
340 349 3.711190 TCTTGCTCCAAGGATACAGCATA 59.289 43.478 5.25 0.00 41.33 3.14
344 353 3.068732 TCGATCTTGCTCCAAGGATACAG 59.931 47.826 5.25 0.00 41.33 2.74
348 357 3.390639 AGAATCGATCTTGCTCCAAGGAT 59.609 43.478 0.00 0.00 41.33 3.24
403 412 6.400303 CGCATGTGCTAATTGGAAAAGAAAAG 60.400 38.462 3.25 0.00 39.32 2.27
427 436 5.006746 GGAAGCCACAAACATAGATAGAACG 59.993 44.000 0.00 0.00 0.00 3.95
439 448 0.535553 TACCCACGGAAGCCACAAAC 60.536 55.000 0.00 0.00 0.00 2.93
440 449 0.250553 CTACCCACGGAAGCCACAAA 60.251 55.000 0.00 0.00 0.00 2.83
441 450 1.373435 CTACCCACGGAAGCCACAA 59.627 57.895 0.00 0.00 0.00 3.33
475 507 0.547471 TGGGCATCTGGGAGTTCAGA 60.547 55.000 0.00 0.00 46.32 3.27
477 509 1.770658 CTATGGGCATCTGGGAGTTCA 59.229 52.381 0.00 0.00 0.00 3.18
493 525 9.639601 TTTCGAACTATATATGTTCTGGCTATG 57.360 33.333 17.96 7.69 40.95 2.23
639 671 2.031333 GCAAAGAGAGCAAACACAGAGG 60.031 50.000 0.00 0.00 0.00 3.69
646 678 0.957362 AGCCAGCAAAGAGAGCAAAC 59.043 50.000 0.00 0.00 0.00 2.93
726 771 0.965866 AGAGGATGCTTGACGGACGA 60.966 55.000 0.00 0.00 0.00 4.20
818 883 6.729428 AGGAGATCAAAGGAATCTCAACATT 58.271 36.000 13.44 0.00 41.80 2.71
830 895 5.585445 CAGACAATTGAGAGGAGATCAAAGG 59.415 44.000 13.59 0.00 39.92 3.11
831 896 6.171921 ACAGACAATTGAGAGGAGATCAAAG 58.828 40.000 13.59 0.00 39.92 2.77
846 911 2.283145 AGCCAGCAGAACAGACAATT 57.717 45.000 0.00 0.00 0.00 2.32
847 912 3.423539 TTAGCCAGCAGAACAGACAAT 57.576 42.857 0.00 0.00 0.00 2.71
929 999 6.450545 GTTTTTCCCTTTGAATCCTTCTCAG 58.549 40.000 0.00 0.00 31.67 3.35
930 1000 5.009610 CGTTTTTCCCTTTGAATCCTTCTCA 59.990 40.000 0.00 0.00 31.67 3.27
931 1001 5.461526 CGTTTTTCCCTTTGAATCCTTCTC 58.538 41.667 0.00 0.00 31.67 2.87
947 1017 9.695884 TGAAACTTTATTTCAATTGCGTTTTTC 57.304 25.926 0.00 2.75 35.69 2.29
1011 1082 1.124462 GCTCGTTCTTCGGATCATCG 58.876 55.000 0.00 0.00 40.32 3.84
1039 1110 7.366847 TGTTCCAATTAAAAATGGACCAAGA 57.633 32.000 0.00 0.00 45.14 3.02
1605 1676 5.510520 GGGTACATGCAAAATTCAAAGGTGA 60.511 40.000 0.00 0.00 0.00 4.02
1624 1695 5.810080 AGAGACAAGCAATATAGGGGTAC 57.190 43.478 0.00 0.00 0.00 3.34
1794 1865 7.995488 CCAAGAAACAGGATATCAGATTTACCT 59.005 37.037 4.83 0.00 0.00 3.08
1836 1927 3.006859 TCTCAAACTCTGCGGATTCTTCA 59.993 43.478 0.00 0.00 0.00 3.02
1952 2044 0.109086 CACACGCTCGAAGACCAGAT 60.109 55.000 0.00 0.00 0.00 2.90
1955 2047 0.388520 CATCACACGCTCGAAGACCA 60.389 55.000 0.00 0.00 0.00 4.02
1960 2052 1.268625 ACACTACATCACACGCTCGAA 59.731 47.619 0.00 0.00 0.00 3.71
2061 2159 4.152402 TCTTGCTCTCGTTTCATTTAGCAC 59.848 41.667 0.00 0.00 39.50 4.40
2141 2239 9.507280 CGATCACGGAATTAAAACTAAGTAGTA 57.493 33.333 0.00 0.00 34.28 1.82
2142 2240 7.009907 GCGATCACGGAATTAAAACTAAGTAGT 59.990 37.037 0.00 0.00 40.15 2.73
2143 2241 7.335491 GCGATCACGGAATTAAAACTAAGTAG 58.665 38.462 0.00 0.00 40.15 2.57
2159 2257 3.333189 CAGCCATCGCGATCACGG 61.333 66.667 20.85 18.74 41.18 4.94
2168 2270 2.880879 CACGGTCGTCAGCCATCG 60.881 66.667 0.00 0.00 0.00 3.84
2275 2377 7.209471 TGCGTCCAATAATGTAAGACTTTTT 57.791 32.000 0.00 0.00 0.00 1.94
2276 2378 6.128007 CCTGCGTCCAATAATGTAAGACTTTT 60.128 38.462 0.00 0.00 0.00 2.27
2277 2379 5.354234 CCTGCGTCCAATAATGTAAGACTTT 59.646 40.000 0.00 0.00 0.00 2.66
2278 2380 4.876107 CCTGCGTCCAATAATGTAAGACTT 59.124 41.667 0.00 0.00 0.00 3.01
2279 2381 4.161565 TCCTGCGTCCAATAATGTAAGACT 59.838 41.667 0.00 0.00 0.00 3.24
2280 2382 4.439057 TCCTGCGTCCAATAATGTAAGAC 58.561 43.478 0.00 0.00 0.00 3.01
2281 2383 4.746535 TCCTGCGTCCAATAATGTAAGA 57.253 40.909 0.00 0.00 0.00 2.10
2282 2384 4.876107 ACTTCCTGCGTCCAATAATGTAAG 59.124 41.667 0.00 0.00 0.00 2.34
2283 2385 4.839121 ACTTCCTGCGTCCAATAATGTAA 58.161 39.130 0.00 0.00 0.00 2.41
2284 2386 4.481368 ACTTCCTGCGTCCAATAATGTA 57.519 40.909 0.00 0.00 0.00 2.29
2285 2387 3.350219 ACTTCCTGCGTCCAATAATGT 57.650 42.857 0.00 0.00 0.00 2.71
2286 2388 3.248602 GCTACTTCCTGCGTCCAATAATG 59.751 47.826 0.00 0.00 0.00 1.90
2287 2389 3.134804 AGCTACTTCCTGCGTCCAATAAT 59.865 43.478 0.00 0.00 0.00 1.28
2288 2390 2.500098 AGCTACTTCCTGCGTCCAATAA 59.500 45.455 0.00 0.00 0.00 1.40
2289 2391 2.100916 GAGCTACTTCCTGCGTCCAATA 59.899 50.000 0.00 0.00 0.00 1.90
2290 2392 0.905357 AGCTACTTCCTGCGTCCAAT 59.095 50.000 0.00 0.00 0.00 3.16
2291 2393 0.246635 GAGCTACTTCCTGCGTCCAA 59.753 55.000 0.00 0.00 0.00 3.53
2292 2394 0.612174 AGAGCTACTTCCTGCGTCCA 60.612 55.000 0.00 0.00 0.00 4.02
2293 2395 0.533032 AAGAGCTACTTCCTGCGTCC 59.467 55.000 0.00 0.00 32.91 4.79
2294 2396 3.634283 GATAAGAGCTACTTCCTGCGTC 58.366 50.000 0.00 0.00 39.72 5.19
2295 2397 2.033550 CGATAAGAGCTACTTCCTGCGT 59.966 50.000 0.00 0.00 39.72 5.24
2296 2398 2.033550 ACGATAAGAGCTACTTCCTGCG 59.966 50.000 0.00 0.00 39.72 5.18
2297 2399 3.376540 CACGATAAGAGCTACTTCCTGC 58.623 50.000 0.00 0.00 39.72 4.85
2298 2400 3.632604 TCCACGATAAGAGCTACTTCCTG 59.367 47.826 0.00 0.00 39.72 3.86
2299 2401 3.633065 GTCCACGATAAGAGCTACTTCCT 59.367 47.826 0.00 0.00 39.72 3.36
2300 2402 3.548415 CGTCCACGATAAGAGCTACTTCC 60.548 52.174 0.00 0.00 43.02 3.46
2301 2403 3.548415 CCGTCCACGATAAGAGCTACTTC 60.548 52.174 0.00 0.00 43.02 3.01
2302 2404 2.358267 CCGTCCACGATAAGAGCTACTT 59.642 50.000 0.00 0.00 43.02 2.24
2303 2405 1.948145 CCGTCCACGATAAGAGCTACT 59.052 52.381 0.00 0.00 43.02 2.57
2304 2406 1.945394 TCCGTCCACGATAAGAGCTAC 59.055 52.381 0.00 0.00 43.02 3.58
2358 2460 3.620821 GTCTTCTCTTAGCACCATTCAGC 59.379 47.826 0.00 0.00 0.00 4.26
2421 2523 3.118738 ACCTCATCAATAGACGGTCCAAC 60.119 47.826 4.14 0.00 0.00 3.77
2432 2534 4.454678 CAAGCAGCCTAACCTCATCAATA 58.545 43.478 0.00 0.00 0.00 1.90
2476 2578 1.112113 GGAACTGGAGAGGCGACATA 58.888 55.000 0.00 0.00 0.00 2.29
2478 2580 0.039180 TAGGAACTGGAGAGGCGACA 59.961 55.000 0.00 0.00 41.52 4.35
2565 4033 7.078851 CGGATAGTTAGTTGATGCTACACTAG 58.921 42.308 0.00 0.00 0.00 2.57
2590 4058 4.164822 TGCTACGTGAAGTACAACTACC 57.835 45.455 0.00 0.00 0.00 3.18
2603 4071 4.553756 TCAGCTAACTCTATGCTACGTG 57.446 45.455 0.00 0.00 35.05 4.49
2757 4803 4.970711 TGGTTAACCACTTTGTCCGATAA 58.029 39.130 23.69 0.00 42.01 1.75
2846 4902 1.377333 CTTTTCCCCTGGACGGAGC 60.377 63.158 0.00 0.00 33.16 4.70
2859 4916 4.379290 GCTGATGTTTGCTCCTCTCTTTTC 60.379 45.833 0.00 0.00 0.00 2.29
2908 4965 9.219603 TGATCAGTCAACTGGTTAAAAGATAAG 57.780 33.333 10.13 0.00 43.91 1.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.