Multiple sequence alignment - TraesCS4D01G194600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G194600 chr4D 100.000 3646 0 0 837 4482 337410730 337414375 0.000000e+00 6734.0
1 TraesCS4D01G194600 chr4D 100.000 609 0 0 1 609 337409894 337410502 0.000000e+00 1125.0
2 TraesCS4D01G194600 chr4D 96.748 123 4 0 2389 2511 55352437 55352559 5.880000e-49 206.0
3 TraesCS4D01G194600 chr4D 95.868 121 5 0 2390 2510 27156540 27156420 3.540000e-46 196.0
4 TraesCS4D01G194600 chr4D 91.852 135 8 3 2382 2514 494875899 494876032 7.660000e-43 185.0
5 TraesCS4D01G194600 chr4D 98.529 68 1 0 3978 4045 337413804 337413871 2.190000e-23 121.0
6 TraesCS4D01G194600 chr4D 98.529 68 1 0 3911 3978 337413871 337413938 2.190000e-23 121.0
7 TraesCS4D01G194600 chr4A 92.113 1420 72 20 2508 3909 134635132 134633735 0.000000e+00 1965.0
8 TraesCS4D01G194600 chr4A 95.984 1021 24 5 843 1858 134636850 134635842 0.000000e+00 1642.0
9 TraesCS4D01G194600 chr4A 93.458 428 18 3 1975 2394 134635555 134635130 1.060000e-175 627.0
10 TraesCS4D01G194600 chr4A 87.062 371 39 9 239 602 134638968 134638600 1.160000e-110 411.0
11 TraesCS4D01G194600 chr4A 83.333 234 18 9 4180 4392 134632120 134631887 3.540000e-46 196.0
12 TraesCS4D01G194600 chr4A 91.667 108 2 3 1896 1996 134635840 134635733 4.670000e-30 143.0
13 TraesCS4D01G194600 chr4A 97.183 71 2 0 4310 4380 134632044 134631974 2.190000e-23 121.0
14 TraesCS4D01G194600 chr4A 91.379 58 4 1 3906 3962 134632176 134632119 1.340000e-10 78.7
15 TraesCS4D01G194600 chr4B 92.920 1356 45 14 841 2161 416540103 416541442 0.000000e+00 1925.0
16 TraesCS4D01G194600 chr4B 93.376 1087 55 4 2890 3962 416542268 416543351 0.000000e+00 1592.0
17 TraesCS4D01G194600 chr4B 94.673 413 17 5 2508 2916 416541725 416542136 1.760000e-178 636.0
18 TraesCS4D01G194600 chr4B 91.133 406 29 5 208 609 416539671 416540073 1.100000e-150 544.0
19 TraesCS4D01G194600 chr4B 93.173 249 13 2 2149 2394 416541480 416541727 3.300000e-96 363.0
20 TraesCS4D01G194600 chr4B 83.898 236 9 7 4180 4390 416543350 416543581 9.830000e-47 198.0
21 TraesCS4D01G194600 chr4B 96.825 63 2 0 4028 4090 44657312 44657250 6.130000e-19 106.0
22 TraesCS4D01G194600 chr4B 87.097 93 6 5 4095 4185 115555228 115555140 2.850000e-17 100.0
23 TraesCS4D01G194600 chr4B 92.453 53 3 1 3978 4029 416543299 416543351 1.730000e-09 75.0
24 TraesCS4D01G194600 chr5A 84.426 244 27 10 1466 1707 631086715 631086481 3.490000e-56 230.0
25 TraesCS4D01G194600 chr5A 84.100 239 30 7 1466 1703 34327756 34327525 1.620000e-54 224.0
26 TraesCS4D01G194600 chr5A 100.000 28 0 0 1154 1181 31965174 31965201 8.000000e-03 52.8
27 TraesCS4D01G194600 chr1D 84.513 226 28 5 1466 1691 453052670 453052888 2.710000e-52 217.0
28 TraesCS4D01G194600 chr1D 86.022 93 13 0 4390 4482 476459814 476459722 2.850000e-17 100.0
29 TraesCS4D01G194600 chr1D 91.111 45 4 0 4387 4431 383448034 383448078 1.350000e-05 62.1
30 TraesCS4D01G194600 chr7D 97.391 115 3 0 2393 2507 167711287 167711401 3.540000e-46 196.0
31 TraesCS4D01G194600 chr7D 95.522 67 3 0 4028 4094 552141139 552141073 1.700000e-19 108.0
32 TraesCS4D01G194600 chr7D 95.522 67 3 0 4028 4094 552154129 552154063 1.700000e-19 108.0
33 TraesCS4D01G194600 chr7D 94.203 69 4 0 4026 4094 557836125 557836193 6.130000e-19 106.0
34 TraesCS4D01G194600 chr7D 96.970 33 1 0 4394 4426 40623764 40623732 6.260000e-04 56.5
35 TraesCS4D01G194600 chr2D 93.893 131 6 2 2386 2514 109700474 109700344 3.540000e-46 196.0
36 TraesCS4D01G194600 chr2D 89.796 49 3 1 4134 4182 621124774 621124728 1.350000e-05 62.1
37 TraesCS4D01G194600 chr2B 96.639 119 3 1 2392 2510 239419441 239419558 3.540000e-46 196.0
38 TraesCS4D01G194600 chr2B 95.522 67 3 0 4028 4094 412776578 412776644 1.700000e-19 108.0
39 TraesCS4D01G194600 chr2B 92.727 55 4 0 4387 4441 615792924 615792978 3.720000e-11 80.5
40 TraesCS4D01G194600 chrUn 95.798 119 5 0 2393 2511 112678693 112678811 4.580000e-45 193.0
41 TraesCS4D01G194600 chrUn 94.030 67 4 0 4028 4094 39719557 39719623 7.930000e-18 102.0
42 TraesCS4D01G194600 chr6A 95.082 122 6 0 2389 2510 168121048 168120927 4.580000e-45 193.0
43 TraesCS4D01G194600 chr7B 85.629 167 19 4 2391 2556 340642032 340642194 2.140000e-38 171.0
44 TraesCS4D01G194600 chr7B 92.045 88 4 2 4095 4181 747756013 747755928 2.190000e-23 121.0
45 TraesCS4D01G194600 chr7B 89.744 78 6 2 4025 4101 702629794 702629870 1.030000e-16 99.0
46 TraesCS4D01G194600 chr7B 84.211 95 7 1 4095 4181 706770726 706770820 7.990000e-13 86.1
47 TraesCS4D01G194600 chr6D 87.407 135 17 0 1326 1460 143393321 143393455 6.000000e-34 156.0
48 TraesCS4D01G194600 chr6D 93.243 74 4 1 4021 4094 469422103 469422031 1.700000e-19 108.0
49 TraesCS4D01G194600 chr6D 82.716 81 10 3 4102 4181 392887342 392887419 8.040000e-08 69.4
50 TraesCS4D01G194600 chr3B 95.522 67 3 0 4028 4094 253487843 253487777 1.700000e-19 108.0
51 TraesCS4D01G194600 chr3B 87.342 79 8 1 4104 4182 744851672 744851748 6.180000e-14 89.8
52 TraesCS4D01G194600 chr3B 84.615 78 10 1 4104 4181 680680581 680680506 4.810000e-10 76.8
53 TraesCS4D01G194600 chr1B 89.744 78 6 1 4104 4181 554688492 554688567 1.030000e-16 99.0
54 TraesCS4D01G194600 chr1A 93.750 48 1 1 4134 4181 551903093 551903048 2.240000e-08 71.3
55 TraesCS4D01G194600 chr3D 87.037 54 7 0 4390 4443 15929239 15929186 1.350000e-05 62.1
56 TraesCS4D01G194600 chr3D 100.000 28 0 0 1155 1182 555448008 555448035 8.000000e-03 52.8
57 TraesCS4D01G194600 chr3D 100.000 28 0 0 1154 1181 602728490 602728463 8.000000e-03 52.8
58 TraesCS4D01G194600 chr7A 96.875 32 1 0 4412 4443 599944102 599944133 2.000000e-03 54.7
59 TraesCS4D01G194600 chr7A 91.892 37 3 0 1154 1190 97873859 97873823 8.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G194600 chr4D 337409894 337414375 4481 False 2025.250000 6734 99.264500 1 4482 4 chr4D.!!$F3 4481
1 TraesCS4D01G194600 chr4A 134631887 134638968 7081 True 647.962500 1965 91.522375 239 4392 8 chr4A.!!$R1 4153
2 TraesCS4D01G194600 chr4B 416539671 416543581 3910 False 761.857143 1925 91.660857 208 4390 7 chr4B.!!$F1 4182

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
62 63 0.108329 ACGACGCCTGGATTTCGAAT 60.108 50.0 15.97 0.0 35.45 3.34 F
159 160 0.117541 TTGTCCTAGGCCACCTACCA 59.882 55.0 5.01 0.0 34.61 3.25 F
200 201 0.320771 AGGCACTCGCGAACATCTTT 60.321 50.0 11.33 0.0 39.92 2.52 F
1189 2713 0.391263 CGCCTCCGCCTTTACTTCTT 60.391 55.0 0.00 0.0 0.00 2.52 F
1268 2792 0.235926 GTGCTTCTTCTTGTGTCCGC 59.764 55.0 0.00 0.0 0.00 5.54 F
2408 4223 0.251297 TTGTACTCCCTCCGTCCGAA 60.251 55.0 0.00 0.0 0.00 4.30 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1188 2712 0.529773 CGGATCGGGCAAGATCGAAA 60.530 55.000 13.53 0.00 45.90 3.46 R
1189 2713 1.067416 CGGATCGGGCAAGATCGAA 59.933 57.895 13.53 0.00 45.90 3.71 R
1268 2792 1.646189 GGTAGAGCTTCGCTTTCCTG 58.354 55.000 0.00 0.00 39.88 3.86 R
2416 4231 0.038166 TTGATGGACAGGCTTGGGAC 59.962 55.000 0.00 0.00 0.00 4.46 R
2417 4232 0.776810 TTTGATGGACAGGCTTGGGA 59.223 50.000 0.00 0.00 0.00 4.37 R
3818 5800 0.032130 ATGAAGATATGCGACGCGGT 59.968 50.000 16.14 9.07 0.00 5.68 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 4.619227 CTCCGCAACCACCGGTGT 62.619 66.667 31.80 17.78 45.71 4.16
20 21 4.178169 TCCGCAACCACCGGTGTT 62.178 61.111 31.80 22.22 45.71 3.32
21 22 3.213402 CCGCAACCACCGGTGTTT 61.213 61.111 31.80 22.95 40.84 2.83
22 23 2.025441 CGCAACCACCGGTGTTTG 59.975 61.111 33.44 33.44 35.34 2.93
23 24 2.473760 CGCAACCACCGGTGTTTGA 61.474 57.895 39.35 0.00 35.36 2.69
24 25 1.810532 GCAACCACCGGTGTTTGAA 59.189 52.632 39.35 0.00 35.36 2.69
25 26 0.173708 GCAACCACCGGTGTTTGAAA 59.826 50.000 39.35 0.00 35.36 2.69
26 27 1.202475 GCAACCACCGGTGTTTGAAAT 60.202 47.619 39.35 8.27 35.36 2.17
27 28 2.740256 GCAACCACCGGTGTTTGAAATT 60.740 45.455 39.35 17.33 35.36 1.82
28 29 2.863137 CAACCACCGGTGTTTGAAATTG 59.137 45.455 34.14 20.06 35.36 2.32
29 30 1.410882 ACCACCGGTGTTTGAAATTGG 59.589 47.619 31.80 15.75 32.98 3.16
30 31 1.270041 CCACCGGTGTTTGAAATTGGG 60.270 52.381 31.80 9.33 0.00 4.12
31 32 1.044611 ACCGGTGTTTGAAATTGGGG 58.955 50.000 6.12 0.00 0.00 4.96
32 33 0.320334 CCGGTGTTTGAAATTGGGGC 60.320 55.000 0.00 0.00 0.00 5.80
33 34 0.320334 CGGTGTTTGAAATTGGGGCC 60.320 55.000 0.00 0.00 0.00 5.80
34 35 0.320334 GGTGTTTGAAATTGGGGCCG 60.320 55.000 0.00 0.00 0.00 6.13
35 36 0.948623 GTGTTTGAAATTGGGGCCGC 60.949 55.000 14.01 14.01 0.00 6.53
36 37 1.375396 GTTTGAAATTGGGGCCGCC 60.375 57.895 18.45 10.45 0.00 6.13
37 38 2.936912 TTTGAAATTGGGGCCGCCG 61.937 57.895 18.45 0.00 0.00 6.46
57 58 2.125673 CGGACGACGCCTGGATTT 60.126 61.111 0.00 0.00 34.82 2.17
58 59 2.165301 CGGACGACGCCTGGATTTC 61.165 63.158 0.00 0.00 34.82 2.17
59 60 2.165301 GGACGACGCCTGGATTTCG 61.165 63.158 0.00 4.10 37.50 3.46
60 61 1.153901 GACGACGCCTGGATTTCGA 60.154 57.895 15.97 0.00 35.45 3.71
61 62 0.734942 GACGACGCCTGGATTTCGAA 60.735 55.000 15.97 0.00 35.45 3.71
62 63 0.108329 ACGACGCCTGGATTTCGAAT 60.108 50.000 15.97 0.00 35.45 3.34
63 64 1.006832 CGACGCCTGGATTTCGAATT 58.993 50.000 0.00 0.00 33.20 2.17
64 65 1.004927 CGACGCCTGGATTTCGAATTC 60.005 52.381 10.84 10.84 33.20 2.17
65 66 2.280628 GACGCCTGGATTTCGAATTCT 58.719 47.619 17.04 0.00 0.00 2.40
66 67 2.280628 ACGCCTGGATTTCGAATTCTC 58.719 47.619 17.04 9.65 0.00 2.87
67 68 1.258982 CGCCTGGATTTCGAATTCTCG 59.741 52.381 17.04 12.26 46.87 4.04
68 69 1.003438 GCCTGGATTTCGAATTCTCGC 60.003 52.381 17.04 12.70 45.04 5.03
69 70 1.258982 CCTGGATTTCGAATTCTCGCG 59.741 52.381 17.04 0.00 45.04 5.87
70 71 1.927174 CTGGATTTCGAATTCTCGCGT 59.073 47.619 17.04 0.00 45.04 6.01
71 72 1.924524 TGGATTTCGAATTCTCGCGTC 59.075 47.619 17.04 0.00 45.04 5.19
72 73 1.072089 GGATTTCGAATTCTCGCGTCG 60.072 52.381 17.04 8.00 45.04 5.12
73 74 0.921347 ATTTCGAATTCTCGCGTCGG 59.079 50.000 14.80 3.56 45.04 4.79
74 75 1.680105 TTTCGAATTCTCGCGTCGGC 61.680 55.000 14.80 0.00 45.04 5.54
75 76 3.617538 CGAATTCTCGCGTCGGCC 61.618 66.667 5.77 0.00 38.45 6.13
76 77 3.617538 GAATTCTCGCGTCGGCCG 61.618 66.667 22.12 22.12 40.40 6.13
94 95 3.822192 CACCGATGCCGACGAGGA 61.822 66.667 0.00 0.00 45.00 3.71
95 96 3.823330 ACCGATGCCGACGAGGAC 61.823 66.667 0.00 0.00 45.00 3.85
96 97 4.570663 CCGATGCCGACGAGGACC 62.571 72.222 0.00 0.00 45.00 4.46
97 98 4.570663 CGATGCCGACGAGGACCC 62.571 72.222 0.00 0.00 45.00 4.46
98 99 3.148279 GATGCCGACGAGGACCCT 61.148 66.667 0.00 0.00 45.00 4.34
99 100 3.432051 GATGCCGACGAGGACCCTG 62.432 68.421 0.00 0.00 45.00 4.45
107 108 4.767255 GAGGACCCTGCGCCACAG 62.767 72.222 4.18 0.00 46.77 3.66
119 120 2.203538 CCACAGGCAGGGCAACTT 60.204 61.111 0.00 0.00 0.00 2.66
135 136 2.674796 ACTTGCGTTGATCCTCCTAC 57.325 50.000 0.00 0.00 0.00 3.18
136 137 2.180276 ACTTGCGTTGATCCTCCTACT 58.820 47.619 0.00 0.00 0.00 2.57
137 138 2.093973 ACTTGCGTTGATCCTCCTACTG 60.094 50.000 0.00 0.00 0.00 2.74
138 139 0.175760 TGCGTTGATCCTCCTACTGC 59.824 55.000 0.00 0.00 0.00 4.40
139 140 0.530870 GCGTTGATCCTCCTACTGCC 60.531 60.000 0.00 0.00 0.00 4.85
140 141 1.115467 CGTTGATCCTCCTACTGCCT 58.885 55.000 0.00 0.00 0.00 4.75
141 142 1.482593 CGTTGATCCTCCTACTGCCTT 59.517 52.381 0.00 0.00 0.00 4.35
142 143 2.739932 CGTTGATCCTCCTACTGCCTTG 60.740 54.545 0.00 0.00 0.00 3.61
143 144 2.237392 GTTGATCCTCCTACTGCCTTGT 59.763 50.000 0.00 0.00 0.00 3.16
144 145 2.111384 TGATCCTCCTACTGCCTTGTC 58.889 52.381 0.00 0.00 0.00 3.18
145 146 1.414550 GATCCTCCTACTGCCTTGTCC 59.585 57.143 0.00 0.00 0.00 4.02
146 147 0.413832 TCCTCCTACTGCCTTGTCCT 59.586 55.000 0.00 0.00 0.00 3.85
147 148 1.644337 TCCTCCTACTGCCTTGTCCTA 59.356 52.381 0.00 0.00 0.00 2.94
148 149 2.035632 CCTCCTACTGCCTTGTCCTAG 58.964 57.143 0.00 0.00 0.00 3.02
149 150 2.035632 CTCCTACTGCCTTGTCCTAGG 58.964 57.143 0.82 0.82 38.40 3.02
155 156 4.153957 CCTTGTCCTAGGCCACCT 57.846 61.111 5.01 0.00 37.71 4.00
156 157 3.317280 CCTTGTCCTAGGCCACCTA 57.683 57.895 5.01 0.00 34.61 3.08
157 158 0.831307 CCTTGTCCTAGGCCACCTAC 59.169 60.000 5.01 0.00 34.61 3.18
158 159 0.831307 CTTGTCCTAGGCCACCTACC 59.169 60.000 5.01 0.00 34.61 3.18
159 160 0.117541 TTGTCCTAGGCCACCTACCA 59.882 55.000 5.01 0.00 34.61 3.25
160 161 0.616679 TGTCCTAGGCCACCTACCAC 60.617 60.000 5.01 0.00 34.61 4.16
161 162 1.002533 TCCTAGGCCACCTACCACC 59.997 63.158 5.01 0.00 34.61 4.61
162 163 1.003051 CCTAGGCCACCTACCACCT 59.997 63.158 5.01 0.00 34.61 4.00
163 164 1.338136 CCTAGGCCACCTACCACCTG 61.338 65.000 5.01 0.00 34.61 4.00
164 165 1.306654 TAGGCCACCTACCACCTGG 60.307 63.158 5.01 0.00 36.75 4.45
166 167 4.778143 GCCACCTACCACCTGGCG 62.778 72.222 0.00 0.00 41.15 5.69
167 168 4.778143 CCACCTACCACCTGGCGC 62.778 72.222 0.00 0.00 39.32 6.53
168 169 4.015406 CACCTACCACCTGGCGCA 62.015 66.667 10.83 0.00 39.32 6.09
169 170 3.706373 ACCTACCACCTGGCGCAG 61.706 66.667 10.83 4.65 39.32 5.18
183 184 4.864334 GCAGGGCCATCACCGAGG 62.864 72.222 6.18 0.00 0.00 4.63
198 199 2.973899 AGGCACTCGCGAACATCT 59.026 55.556 11.33 2.92 39.92 2.90
199 200 1.293498 AGGCACTCGCGAACATCTT 59.707 52.632 11.33 0.00 39.92 2.40
200 201 0.320771 AGGCACTCGCGAACATCTTT 60.321 50.000 11.33 0.00 39.92 2.52
201 202 0.517316 GGCACTCGCGAACATCTTTT 59.483 50.000 11.33 0.00 39.92 2.27
202 203 1.595609 GCACTCGCGAACATCTTTTG 58.404 50.000 11.33 0.00 0.00 2.44
203 204 1.194547 GCACTCGCGAACATCTTTTGA 59.805 47.619 11.33 0.00 0.00 2.69
204 205 2.827555 CACTCGCGAACATCTTTTGAC 58.172 47.619 11.33 0.00 0.00 3.18
205 206 1.455786 ACTCGCGAACATCTTTTGACG 59.544 47.619 11.33 0.00 34.10 4.35
206 207 0.787787 TCGCGAACATCTTTTGACGG 59.212 50.000 6.20 0.00 32.63 4.79
294 295 2.690778 GGCAGGCGCAACCAACTAG 61.691 63.158 10.83 0.00 43.14 2.57
297 298 0.602638 CAGGCGCAACCAACTAGACA 60.603 55.000 10.83 0.00 43.14 3.41
308 312 5.373812 ACCAACTAGACAATCCTAATGGG 57.626 43.478 0.00 0.00 33.42 4.00
320 324 4.487714 TCCTAATGGGATCACACTTCAC 57.512 45.455 0.00 0.00 39.58 3.18
321 325 3.199946 TCCTAATGGGATCACACTTCACC 59.800 47.826 0.00 0.00 39.58 4.02
322 326 2.514458 AATGGGATCACACTTCACCC 57.486 50.000 0.00 0.00 40.79 4.61
323 327 0.625849 ATGGGATCACACTTCACCCC 59.374 55.000 0.00 0.00 39.78 4.95
390 394 6.176975 TCAGATAAATACACTTTTGGCACG 57.823 37.500 0.00 0.00 0.00 5.34
445 452 8.293867 GCTATAATGTTTCCACAAAACTACACA 58.706 33.333 2.73 0.00 46.19 3.72
879 2400 1.407437 CCAATCCGACCTCTTTCCAGG 60.407 57.143 0.00 0.00 39.80 4.45
1086 2610 1.227823 CGCCCAAATCGCTCCCATA 60.228 57.895 0.00 0.00 0.00 2.74
1113 2637 1.191489 TCGAGGAGGTTGCCATCACA 61.191 55.000 0.00 0.00 0.00 3.58
1157 2681 0.872021 CTCCTCGACATGTAAGCCGC 60.872 60.000 0.00 0.00 0.00 6.53
1158 2682 1.883084 CCTCGACATGTAAGCCGCC 60.883 63.158 0.00 0.00 0.00 6.13
1159 2683 2.202690 TCGACATGTAAGCCGCCG 60.203 61.111 0.00 0.00 0.00 6.46
1160 2684 3.925238 CGACATGTAAGCCGCCGC 61.925 66.667 0.00 0.00 0.00 6.53
1161 2685 3.573491 GACATGTAAGCCGCCGCC 61.573 66.667 0.00 0.00 34.57 6.13
1162 2686 4.096003 ACATGTAAGCCGCCGCCT 62.096 61.111 0.00 0.00 34.57 5.52
1163 2687 3.272334 CATGTAAGCCGCCGCCTC 61.272 66.667 0.00 0.00 34.57 4.70
1164 2688 4.547367 ATGTAAGCCGCCGCCTCC 62.547 66.667 0.00 0.00 34.57 4.30
1188 2712 1.218316 CGCCTCCGCCTTTACTTCT 59.782 57.895 0.00 0.00 0.00 2.85
1189 2713 0.391263 CGCCTCCGCCTTTACTTCTT 60.391 55.000 0.00 0.00 0.00 2.52
1197 2721 3.933332 CCGCCTTTACTTCTTTCGATCTT 59.067 43.478 0.00 0.00 0.00 2.40
1268 2792 0.235926 GTGCTTCTTCTTGTGTCCGC 59.764 55.000 0.00 0.00 0.00 5.54
1446 2970 6.748198 CGGTACTTCTTTGCTTGTTGTTTTTA 59.252 34.615 0.00 0.00 0.00 1.52
1484 3008 6.984474 TCGGTGGTGATTTAGATTTACAGATC 59.016 38.462 0.00 0.00 0.00 2.75
1694 3220 4.272991 CCTATCATCTGTGCAGCTTTTCTC 59.727 45.833 0.00 0.00 0.00 2.87
1841 3389 3.304458 CGGCCTTTGACTTTAAACTCCAC 60.304 47.826 0.00 0.00 0.00 4.02
1891 3439 6.394345 AGAAAGAAAATGTCCTGGTATCCT 57.606 37.500 0.00 0.00 0.00 3.24
2077 3833 5.953548 TGTAGTGCTGTTCCTGTATACCTAA 59.046 40.000 0.00 0.00 0.00 2.69
2112 3868 2.843401 TTTCATGGCATTGCTTTGCT 57.157 40.000 8.82 0.00 42.38 3.91
2116 3872 1.463056 CATGGCATTGCTTTGCTTGTG 59.537 47.619 8.82 4.82 42.38 3.33
2184 3990 2.892852 CCCTTGATCTTTTGCACTTCCA 59.107 45.455 0.00 0.00 0.00 3.53
2382 4197 5.168569 TGAATTTAGACTACACAAGAGGCG 58.831 41.667 0.00 0.00 0.00 5.52
2392 4207 2.256117 ACAAGAGGCGCTAAACTTGT 57.744 45.000 23.92 23.92 44.92 3.16
2393 4208 3.064207 CACAAGAGGCGCTAAACTTGTA 58.936 45.455 26.55 0.00 46.94 2.41
2394 4209 3.064931 ACAAGAGGCGCTAAACTTGTAC 58.935 45.455 26.20 3.29 46.84 2.90
2395 4210 3.244112 ACAAGAGGCGCTAAACTTGTACT 60.244 43.478 26.20 7.51 46.84 2.73
2396 4211 3.233684 AGAGGCGCTAAACTTGTACTC 57.766 47.619 7.64 0.57 0.00 2.59
2397 4212 2.094130 AGAGGCGCTAAACTTGTACTCC 60.094 50.000 7.64 0.00 0.00 3.85
2398 4213 1.066358 AGGCGCTAAACTTGTACTCCC 60.066 52.381 7.64 0.00 0.00 4.30
2399 4214 1.066358 GGCGCTAAACTTGTACTCCCT 60.066 52.381 7.64 0.00 0.00 4.20
2400 4215 2.269172 GCGCTAAACTTGTACTCCCTC 58.731 52.381 0.00 0.00 0.00 4.30
2401 4216 2.889852 CGCTAAACTTGTACTCCCTCC 58.110 52.381 0.00 0.00 0.00 4.30
2402 4217 2.734492 CGCTAAACTTGTACTCCCTCCG 60.734 54.545 0.00 0.00 0.00 4.63
2403 4218 2.233186 GCTAAACTTGTACTCCCTCCGT 59.767 50.000 0.00 0.00 0.00 4.69
2404 4219 3.675502 GCTAAACTTGTACTCCCTCCGTC 60.676 52.174 0.00 0.00 0.00 4.79
2405 4220 1.264295 AACTTGTACTCCCTCCGTCC 58.736 55.000 0.00 0.00 0.00 4.79
2406 4221 0.964358 ACTTGTACTCCCTCCGTCCG 60.964 60.000 0.00 0.00 0.00 4.79
2407 4222 0.679002 CTTGTACTCCCTCCGTCCGA 60.679 60.000 0.00 0.00 0.00 4.55
2408 4223 0.251297 TTGTACTCCCTCCGTCCGAA 60.251 55.000 0.00 0.00 0.00 4.30
2409 4224 0.251297 TGTACTCCCTCCGTCCGAAA 60.251 55.000 0.00 0.00 0.00 3.46
2410 4225 0.890683 GTACTCCCTCCGTCCGAAAA 59.109 55.000 0.00 0.00 0.00 2.29
2411 4226 1.273327 GTACTCCCTCCGTCCGAAAAA 59.727 52.381 0.00 0.00 0.00 1.94
2412 4227 0.320697 ACTCCCTCCGTCCGAAAAAG 59.679 55.000 0.00 0.00 0.00 2.27
2413 4228 1.004200 TCCCTCCGTCCGAAAAAGC 60.004 57.895 0.00 0.00 0.00 3.51
2414 4229 1.003718 CCCTCCGTCCGAAAAAGCT 60.004 57.895 0.00 0.00 0.00 3.74
2415 4230 0.605589 CCCTCCGTCCGAAAAAGCTT 60.606 55.000 0.00 0.00 0.00 3.74
2416 4231 0.517316 CCTCCGTCCGAAAAAGCTTG 59.483 55.000 0.00 0.00 0.00 4.01
2417 4232 1.226746 CTCCGTCCGAAAAAGCTTGT 58.773 50.000 0.00 0.00 0.00 3.16
2418 4233 1.194772 CTCCGTCCGAAAAAGCTTGTC 59.805 52.381 0.00 0.00 0.00 3.18
2419 4234 0.237498 CCGTCCGAAAAAGCTTGTCC 59.763 55.000 0.00 0.00 0.00 4.02
2420 4235 0.237498 CGTCCGAAAAAGCTTGTCCC 59.763 55.000 0.00 0.00 0.00 4.46
2421 4236 1.314730 GTCCGAAAAAGCTTGTCCCA 58.685 50.000 0.00 0.00 0.00 4.37
2422 4237 1.679153 GTCCGAAAAAGCTTGTCCCAA 59.321 47.619 0.00 0.00 0.00 4.12
2423 4238 1.953686 TCCGAAAAAGCTTGTCCCAAG 59.046 47.619 0.00 0.00 0.00 3.61
2424 4239 1.602920 CCGAAAAAGCTTGTCCCAAGC 60.603 52.381 18.69 18.69 43.31 4.01
2425 4240 1.602920 CGAAAAAGCTTGTCCCAAGCC 60.603 52.381 21.70 8.27 44.01 4.35
2426 4241 1.688735 GAAAAAGCTTGTCCCAAGCCT 59.311 47.619 21.70 9.44 44.01 4.58
2427 4242 1.043022 AAAAGCTTGTCCCAAGCCTG 58.957 50.000 21.70 0.00 44.01 4.85
2428 4243 0.106015 AAAGCTTGTCCCAAGCCTGT 60.106 50.000 21.70 8.10 44.01 4.00
2429 4244 0.538287 AAGCTTGTCCCAAGCCTGTC 60.538 55.000 21.70 0.00 44.01 3.51
2430 4245 1.973812 GCTTGTCCCAAGCCTGTCC 60.974 63.158 16.19 0.00 37.30 4.02
2431 4246 1.455849 CTTGTCCCAAGCCTGTCCA 59.544 57.895 0.00 0.00 0.00 4.02
2432 4247 0.038744 CTTGTCCCAAGCCTGTCCAT 59.961 55.000 0.00 0.00 0.00 3.41
2433 4248 0.038166 TTGTCCCAAGCCTGTCCATC 59.962 55.000 0.00 0.00 0.00 3.51
2434 4249 1.133181 TGTCCCAAGCCTGTCCATCA 61.133 55.000 0.00 0.00 0.00 3.07
2435 4250 0.038166 GTCCCAAGCCTGTCCATCAA 59.962 55.000 0.00 0.00 0.00 2.57
2436 4251 0.776810 TCCCAAGCCTGTCCATCAAA 59.223 50.000 0.00 0.00 0.00 2.69
2437 4252 1.358787 TCCCAAGCCTGTCCATCAAAT 59.641 47.619 0.00 0.00 0.00 2.32
2438 4253 1.479323 CCCAAGCCTGTCCATCAAATG 59.521 52.381 0.00 0.00 0.00 2.32
2455 4270 8.837788 CATCAAATGGATGTATCTAGCACTAA 57.162 34.615 0.00 0.00 46.81 2.24
2456 4271 8.715998 CATCAAATGGATGTATCTAGCACTAAC 58.284 37.037 0.00 0.00 46.81 2.34
2457 4272 8.023021 TCAAATGGATGTATCTAGCACTAACT 57.977 34.615 0.00 0.00 0.00 2.24
2458 4273 8.486210 TCAAATGGATGTATCTAGCACTAACTT 58.514 33.333 0.00 0.00 0.00 2.66
2459 4274 8.554528 CAAATGGATGTATCTAGCACTAACTTG 58.445 37.037 0.00 0.00 0.00 3.16
2460 4275 6.161855 TGGATGTATCTAGCACTAACTTGG 57.838 41.667 0.00 0.00 0.00 3.61
2461 4276 5.661312 TGGATGTATCTAGCACTAACTTGGT 59.339 40.000 0.00 0.00 0.00 3.67
2462 4277 5.986135 GGATGTATCTAGCACTAACTTGGTG 59.014 44.000 0.97 0.97 37.70 4.17
2474 4289 7.470289 CACTAACTTGGTGCTAGATACATTC 57.530 40.000 0.00 0.00 0.00 2.67
2475 4290 7.041721 CACTAACTTGGTGCTAGATACATTCA 58.958 38.462 0.00 0.00 0.00 2.57
2476 4291 7.712639 CACTAACTTGGTGCTAGATACATTCAT 59.287 37.037 0.00 0.00 0.00 2.57
2477 4292 8.267894 ACTAACTTGGTGCTAGATACATTCATT 58.732 33.333 0.00 0.00 0.00 2.57
2478 4293 7.944729 AACTTGGTGCTAGATACATTCATTT 57.055 32.000 0.00 0.00 0.00 2.32
2479 4294 7.325660 ACTTGGTGCTAGATACATTCATTTG 57.674 36.000 0.00 0.00 0.00 2.32
2480 4295 7.112122 ACTTGGTGCTAGATACATTCATTTGA 58.888 34.615 0.00 0.00 0.00 2.69
2481 4296 7.281774 ACTTGGTGCTAGATACATTCATTTGAG 59.718 37.037 0.00 0.00 0.00 3.02
2482 4297 6.057533 TGGTGCTAGATACATTCATTTGAGG 58.942 40.000 0.00 0.00 0.00 3.86
2483 4298 5.471456 GGTGCTAGATACATTCATTTGAGGG 59.529 44.000 0.00 0.00 0.00 4.30
2484 4299 6.291377 GTGCTAGATACATTCATTTGAGGGA 58.709 40.000 0.00 0.00 0.00 4.20
2485 4300 6.203723 GTGCTAGATACATTCATTTGAGGGAC 59.796 42.308 0.00 0.00 0.00 4.46
2486 4301 6.126796 TGCTAGATACATTCATTTGAGGGACA 60.127 38.462 0.00 0.00 0.00 4.02
2487 4302 6.767902 GCTAGATACATTCATTTGAGGGACAA 59.232 38.462 0.00 0.00 36.65 3.18
2488 4303 7.041508 GCTAGATACATTCATTTGAGGGACAAG 60.042 40.741 0.00 0.00 39.77 3.16
2489 4304 6.725364 AGATACATTCATTTGAGGGACAAGT 58.275 36.000 0.00 0.00 39.77 3.16
2490 4305 7.177878 AGATACATTCATTTGAGGGACAAGTT 58.822 34.615 0.00 0.00 39.77 2.66
2491 4306 7.671398 AGATACATTCATTTGAGGGACAAGTTT 59.329 33.333 0.00 0.00 39.77 2.66
2492 4307 6.484364 ACATTCATTTGAGGGACAAGTTTT 57.516 33.333 0.00 0.00 39.77 2.43
2493 4308 6.888105 ACATTCATTTGAGGGACAAGTTTTT 58.112 32.000 0.00 0.00 39.77 1.94
2535 4354 9.382275 AGCAAATTGTTAGTTCTTCAAAATTGT 57.618 25.926 0.00 0.00 31.26 2.71
2600 4421 6.826231 TGATGTAGGTCAGTTCAGTTTTTCAA 59.174 34.615 0.00 0.00 0.00 2.69
2634 4455 6.414732 AGCAGAATATACAAGTTGGCAGTAA 58.585 36.000 7.96 0.00 0.00 2.24
2714 4535 7.768120 TCGCCCTAAAATAATTTGCATTCATTT 59.232 29.630 0.00 0.00 0.00 2.32
3004 4984 3.138304 GGCTTGTGGTCCAAAAATTTCC 58.862 45.455 0.00 0.00 31.20 3.13
3153 5134 9.647797 TTCTAAGACTGAGATTTAAATGCGTAA 57.352 29.630 5.17 0.00 0.00 3.18
3178 5159 3.813529 AGTGAGCGTTGCTATGTTTTC 57.186 42.857 0.00 0.00 39.88 2.29
3210 5191 3.498397 CGCACCTACATGAGAAAACAAGT 59.502 43.478 0.00 0.00 0.00 3.16
3397 5378 3.334691 TGCCGAGTTGGTAGAGAAATTG 58.665 45.455 0.00 0.00 41.21 2.32
3404 5385 5.308825 AGTTGGTAGAGAAATTGACTGTGG 58.691 41.667 0.00 0.00 0.00 4.17
3430 5411 3.380320 AGGTCAAAAAGGAGGAACAAACG 59.620 43.478 0.00 0.00 0.00 3.60
3476 5457 7.930325 CAGTAGATGATAAGAAGGATGCTGAAA 59.070 37.037 0.00 0.00 0.00 2.69
3486 5467 5.595952 AGAAGGATGCTGAAAAGTGAAAACT 59.404 36.000 0.00 0.00 0.00 2.66
3487 5468 5.859205 AGGATGCTGAAAAGTGAAAACTT 57.141 34.783 0.00 0.00 0.00 2.66
3515 5496 5.347342 CGGCTATTTCATCCTATGCTCTAG 58.653 45.833 0.00 0.00 0.00 2.43
3516 5497 5.669477 GGCTATTTCATCCTATGCTCTAGG 58.331 45.833 6.59 6.59 36.06 3.02
3517 5498 5.115480 GCTATTTCATCCTATGCTCTAGGC 58.885 45.833 7.77 0.00 42.22 3.93
3548 5529 7.702772 CACTGCTATACTCGAACTAGTGAATTT 59.297 37.037 0.00 0.00 37.15 1.82
3631 5613 2.727123 TGTGTTGTTCTGTGGGATGT 57.273 45.000 0.00 0.00 0.00 3.06
3632 5614 3.011566 TGTGTTGTTCTGTGGGATGTT 57.988 42.857 0.00 0.00 0.00 2.71
3647 5629 2.209273 GATGTTTGTTTGTGTTGGGCC 58.791 47.619 0.00 0.00 0.00 5.80
3724 5706 2.440599 GATGGTGTGCCTGGGGTT 59.559 61.111 0.00 0.00 35.27 4.11
3818 5800 4.702831 TGATGCTGTCTTGTCACTTTGTA 58.297 39.130 0.00 0.00 0.00 2.41
3819 5801 4.511454 TGATGCTGTCTTGTCACTTTGTAC 59.489 41.667 0.00 0.00 0.00 2.90
3841 5823 1.398960 GCGTCGCATATCTTCATTGCC 60.399 52.381 13.44 0.00 32.76 4.52
3871 5865 8.424133 AGAACAATGATATAGTACATGAGCACA 58.576 33.333 0.00 0.00 0.00 4.57
3953 7509 2.125952 CGACGAGCACATGCCTCA 60.126 61.111 12.74 0.00 43.38 3.86
3954 7510 2.163390 CGACGAGCACATGCCTCAG 61.163 63.158 12.74 8.61 43.38 3.35
3955 7511 1.216444 GACGAGCACATGCCTCAGA 59.784 57.895 12.74 0.00 43.38 3.27
3956 7512 0.179089 GACGAGCACATGCCTCAGAT 60.179 55.000 12.74 0.29 43.38 2.90
3957 7513 1.067669 GACGAGCACATGCCTCAGATA 59.932 52.381 12.74 0.00 43.38 1.98
3959 7515 1.068281 CGAGCACATGCCTCAGATAGT 59.932 52.381 12.74 0.00 43.38 2.12
3961 7517 3.243535 CGAGCACATGCCTCAGATAGTTA 60.244 47.826 12.74 0.00 43.38 2.24
3962 7518 4.054671 GAGCACATGCCTCAGATAGTTAC 58.945 47.826 0.00 0.00 43.38 2.50
3963 7519 3.708631 AGCACATGCCTCAGATAGTTACT 59.291 43.478 0.00 0.00 43.38 2.24
3964 7520 4.054671 GCACATGCCTCAGATAGTTACTC 58.945 47.826 0.00 0.00 34.31 2.59
3965 7521 4.626042 CACATGCCTCAGATAGTTACTCC 58.374 47.826 0.00 0.00 0.00 3.85
3966 7522 3.643792 ACATGCCTCAGATAGTTACTCCC 59.356 47.826 0.00 0.00 0.00 4.30
3967 7523 3.689872 TGCCTCAGATAGTTACTCCCT 57.310 47.619 0.00 0.00 0.00 4.20
3968 7524 3.567397 TGCCTCAGATAGTTACTCCCTC 58.433 50.000 0.00 0.00 0.00 4.30
3969 7525 2.894765 GCCTCAGATAGTTACTCCCTCC 59.105 54.545 0.00 0.00 0.00 4.30
3970 7526 3.150767 CCTCAGATAGTTACTCCCTCCG 58.849 54.545 0.00 0.00 0.00 4.63
3971 7527 3.435313 CCTCAGATAGTTACTCCCTCCGT 60.435 52.174 0.00 0.00 0.00 4.69
3972 7528 4.208746 CTCAGATAGTTACTCCCTCCGTT 58.791 47.826 0.00 0.00 0.00 4.44
3973 7529 4.205587 TCAGATAGTTACTCCCTCCGTTC 58.794 47.826 0.00 0.00 0.00 3.95
3974 7530 3.003482 CAGATAGTTACTCCCTCCGTTCG 59.997 52.174 0.00 0.00 0.00 3.95
3975 7531 1.755179 TAGTTACTCCCTCCGTTCGG 58.245 55.000 4.74 4.74 0.00 4.30
3976 7532 0.038744 AGTTACTCCCTCCGTTCGGA 59.961 55.000 13.34 13.34 0.00 4.55
3977 7533 0.890683 GTTACTCCCTCCGTTCGGAA 59.109 55.000 14.79 0.04 33.41 4.30
3978 7534 0.890683 TTACTCCCTCCGTTCGGAAC 59.109 55.000 14.79 10.83 33.41 3.62
3979 7535 0.967380 TACTCCCTCCGTTCGGAACC 60.967 60.000 14.83 0.00 33.41 3.62
3980 7536 3.352338 CTCCCTCCGTTCGGAACCG 62.352 68.421 14.83 6.94 41.35 4.44
3989 7545 3.289062 TCGGAACCGACGAGCACA 61.289 61.111 12.04 0.00 44.01 4.57
3990 7546 2.126071 CGGAACCGACGAGCACAT 60.126 61.111 7.53 0.00 42.83 3.21
3991 7547 2.444624 CGGAACCGACGAGCACATG 61.445 63.158 7.53 0.00 42.83 3.21
3992 7548 1.374252 GGAACCGACGAGCACATGT 60.374 57.895 0.00 0.00 0.00 3.21
3993 7549 0.949105 GGAACCGACGAGCACATGTT 60.949 55.000 0.00 0.00 0.00 2.71
3994 7550 0.438830 GAACCGACGAGCACATGTTC 59.561 55.000 0.00 0.00 0.00 3.18
3995 7551 0.949105 AACCGACGAGCACATGTTCC 60.949 55.000 0.00 0.00 0.00 3.62
3996 7552 2.100631 CCGACGAGCACATGTTCCC 61.101 63.158 0.00 0.00 0.00 3.97
3997 7553 1.079819 CGACGAGCACATGTTCCCT 60.080 57.895 0.00 0.00 0.00 4.20
3998 7554 1.078759 CGACGAGCACATGTTCCCTC 61.079 60.000 0.00 1.66 0.00 4.30
3999 7555 0.247736 GACGAGCACATGTTCCCTCT 59.752 55.000 0.00 0.00 0.00 3.69
4000 7556 1.476891 GACGAGCACATGTTCCCTCTA 59.523 52.381 0.00 0.00 0.00 2.43
4001 7557 1.899814 ACGAGCACATGTTCCCTCTAA 59.100 47.619 0.00 0.00 0.00 2.10
4002 7558 2.271800 CGAGCACATGTTCCCTCTAAC 58.728 52.381 0.00 0.00 0.00 2.34
4003 7559 2.633488 GAGCACATGTTCCCTCTAACC 58.367 52.381 0.00 0.00 0.00 2.85
4004 7560 1.066143 AGCACATGTTCCCTCTAACCG 60.066 52.381 0.00 0.00 0.00 4.44
4005 7561 1.066430 GCACATGTTCCCTCTAACCGA 60.066 52.381 0.00 0.00 0.00 4.69
4006 7562 2.618053 CACATGTTCCCTCTAACCGAC 58.382 52.381 0.00 0.00 0.00 4.79
4007 7563 1.203994 ACATGTTCCCTCTAACCGACG 59.796 52.381 0.00 0.00 0.00 5.12
4008 7564 1.475280 CATGTTCCCTCTAACCGACGA 59.525 52.381 0.00 0.00 0.00 4.20
4009 7565 1.171308 TGTTCCCTCTAACCGACGAG 58.829 55.000 0.00 0.00 0.00 4.18
4010 7566 0.179142 GTTCCCTCTAACCGACGAGC 60.179 60.000 0.00 0.00 0.00 5.03
4011 7567 0.609957 TTCCCTCTAACCGACGAGCA 60.610 55.000 0.00 0.00 0.00 4.26
4012 7568 1.139095 CCCTCTAACCGACGAGCAC 59.861 63.158 0.00 0.00 0.00 4.40
4013 7569 1.592400 CCCTCTAACCGACGAGCACA 61.592 60.000 0.00 0.00 0.00 4.57
4014 7570 0.456221 CCTCTAACCGACGAGCACAT 59.544 55.000 0.00 0.00 0.00 3.21
4015 7571 1.550065 CTCTAACCGACGAGCACATG 58.450 55.000 0.00 0.00 0.00 3.21
4016 7572 0.457853 TCTAACCGACGAGCACATGC 60.458 55.000 0.00 0.00 42.49 4.06
4017 7573 1.421410 CTAACCGACGAGCACATGCC 61.421 60.000 0.00 0.00 43.38 4.40
4018 7574 1.884075 TAACCGACGAGCACATGCCT 61.884 55.000 0.00 0.00 43.38 4.75
4019 7575 2.887568 CCGACGAGCACATGCCTC 60.888 66.667 0.00 0.00 43.38 4.70
4020 7576 2.125952 CGACGAGCACATGCCTCA 60.126 61.111 12.74 0.00 43.38 3.86
4021 7577 2.163390 CGACGAGCACATGCCTCAG 61.163 63.158 12.74 8.61 43.38 3.35
4022 7578 1.216444 GACGAGCACATGCCTCAGA 59.784 57.895 12.74 0.00 43.38 3.27
4023 7579 0.179089 GACGAGCACATGCCTCAGAT 60.179 55.000 12.74 0.29 43.38 2.90
4024 7580 1.067669 GACGAGCACATGCCTCAGATA 59.932 52.381 12.74 0.00 43.38 1.98
4025 7581 1.068281 ACGAGCACATGCCTCAGATAG 59.932 52.381 12.74 1.30 43.38 2.08
4026 7582 1.068281 CGAGCACATGCCTCAGATAGT 59.932 52.381 12.74 0.00 43.38 2.12
4027 7583 2.482664 CGAGCACATGCCTCAGATAGTT 60.483 50.000 12.74 0.00 43.38 2.24
4028 7584 3.243535 CGAGCACATGCCTCAGATAGTTA 60.244 47.826 12.74 0.00 43.38 2.24
4029 7585 4.054671 GAGCACATGCCTCAGATAGTTAC 58.945 47.826 0.00 0.00 43.38 2.50
4030 7586 3.708631 AGCACATGCCTCAGATAGTTACT 59.291 43.478 0.00 0.00 43.38 2.24
4031 7587 4.054671 GCACATGCCTCAGATAGTTACTC 58.945 47.826 0.00 0.00 34.31 2.59
4032 7588 4.626042 CACATGCCTCAGATAGTTACTCC 58.374 47.826 0.00 0.00 0.00 3.85
4033 7589 3.643792 ACATGCCTCAGATAGTTACTCCC 59.356 47.826 0.00 0.00 0.00 4.30
4034 7590 3.689872 TGCCTCAGATAGTTACTCCCT 57.310 47.619 0.00 0.00 0.00 4.20
4035 7591 3.567397 TGCCTCAGATAGTTACTCCCTC 58.433 50.000 0.00 0.00 0.00 4.30
4036 7592 2.894765 GCCTCAGATAGTTACTCCCTCC 59.105 54.545 0.00 0.00 0.00 4.30
4037 7593 3.150767 CCTCAGATAGTTACTCCCTCCG 58.849 54.545 0.00 0.00 0.00 4.63
4038 7594 3.435313 CCTCAGATAGTTACTCCCTCCGT 60.435 52.174 0.00 0.00 0.00 4.69
4039 7595 4.208746 CTCAGATAGTTACTCCCTCCGTT 58.791 47.826 0.00 0.00 0.00 4.44
4040 7596 4.205587 TCAGATAGTTACTCCCTCCGTTC 58.794 47.826 0.00 0.00 0.00 3.95
4041 7597 3.952323 CAGATAGTTACTCCCTCCGTTCA 59.048 47.826 0.00 0.00 0.00 3.18
4042 7598 4.036971 CAGATAGTTACTCCCTCCGTTCAG 59.963 50.000 0.00 0.00 0.00 3.02
4043 7599 2.599408 AGTTACTCCCTCCGTTCAGA 57.401 50.000 0.00 0.00 0.00 3.27
4044 7600 2.885616 AGTTACTCCCTCCGTTCAGAA 58.114 47.619 0.00 0.00 0.00 3.02
4045 7601 3.442076 AGTTACTCCCTCCGTTCAGAAT 58.558 45.455 0.00 0.00 0.00 2.40
4046 7602 3.838903 AGTTACTCCCTCCGTTCAGAATT 59.161 43.478 0.00 0.00 0.00 2.17
4047 7603 5.021458 AGTTACTCCCTCCGTTCAGAATTA 58.979 41.667 0.00 0.00 0.00 1.40
4048 7604 3.889520 ACTCCCTCCGTTCAGAATTAC 57.110 47.619 0.00 0.00 0.00 1.89
4049 7605 3.442076 ACTCCCTCCGTTCAGAATTACT 58.558 45.455 0.00 0.00 0.00 2.24
4050 7606 3.447944 ACTCCCTCCGTTCAGAATTACTC 59.552 47.826 0.00 0.00 0.00 2.59
4051 7607 2.426024 TCCCTCCGTTCAGAATTACTCG 59.574 50.000 0.00 0.00 0.00 4.18
4052 7608 2.165845 CCCTCCGTTCAGAATTACTCGT 59.834 50.000 0.00 0.00 0.00 4.18
4053 7609 3.436496 CCTCCGTTCAGAATTACTCGTC 58.564 50.000 0.00 0.00 0.00 4.20
4054 7610 3.128938 CCTCCGTTCAGAATTACTCGTCT 59.871 47.826 0.00 0.00 0.00 4.18
4055 7611 4.334759 CCTCCGTTCAGAATTACTCGTCTA 59.665 45.833 0.00 0.00 0.00 2.59
4056 7612 5.163683 CCTCCGTTCAGAATTACTCGTCTAA 60.164 44.000 0.00 0.00 0.00 2.10
4057 7613 6.258230 TCCGTTCAGAATTACTCGTCTAAA 57.742 37.500 0.00 0.00 0.00 1.85
4058 7614 6.680810 TCCGTTCAGAATTACTCGTCTAAAA 58.319 36.000 0.00 0.00 0.00 1.52
4059 7615 7.147312 TCCGTTCAGAATTACTCGTCTAAAAA 58.853 34.615 0.00 0.00 0.00 1.94
4171 7727 9.782028 CATTTTTGTGACAAATAATTCTGAACG 57.218 29.630 11.97 0.00 0.00 3.95
4172 7728 7.922505 TTTTGTGACAAATAATTCTGAACGG 57.077 32.000 11.97 0.00 0.00 4.44
4173 7729 6.869315 TTGTGACAAATAATTCTGAACGGA 57.131 33.333 0.00 0.00 0.00 4.69
4174 7730 6.480524 TGTGACAAATAATTCTGAACGGAG 57.519 37.500 0.00 0.00 0.00 4.63
4175 7731 5.411361 TGTGACAAATAATTCTGAACGGAGG 59.589 40.000 0.00 0.00 0.00 4.30
4176 7732 4.941263 TGACAAATAATTCTGAACGGAGGG 59.059 41.667 0.00 0.00 0.00 4.30
4177 7733 5.174037 ACAAATAATTCTGAACGGAGGGA 57.826 39.130 0.00 0.00 0.00 4.20
4178 7734 5.186198 ACAAATAATTCTGAACGGAGGGAG 58.814 41.667 0.00 0.00 0.00 4.30
4188 7744 3.835978 TGAACGGAGGGAGTATCTTTGAA 59.164 43.478 0.00 0.00 33.73 2.69
4267 7827 7.035004 GCTCCAAAAATTTACACATAGCATGA 58.965 34.615 0.00 0.00 0.00 3.07
4268 7828 7.009540 GCTCCAAAAATTTACACATAGCATGAC 59.990 37.037 0.00 0.00 0.00 3.06
4269 7829 7.890515 TCCAAAAATTTACACATAGCATGACA 58.109 30.769 0.00 0.00 0.00 3.58
4270 7830 8.530311 TCCAAAAATTTACACATAGCATGACAT 58.470 29.630 0.00 0.00 0.00 3.06
4271 7831 9.800433 CCAAAAATTTACACATAGCATGACATA 57.200 29.630 0.00 0.00 0.00 2.29
4287 7874 6.630443 GCATGACATACGAATTTGATGAAGAC 59.370 38.462 0.00 0.00 0.00 3.01
4288 7875 6.662414 TGACATACGAATTTGATGAAGACC 57.338 37.500 0.00 0.00 0.00 3.85
4298 7885 2.107366 TGATGAAGACCGTGGATGCTA 58.893 47.619 0.00 0.00 0.00 3.49
4371 7958 5.416639 TGAATTTGATGAAGAGTGTGGATGG 59.583 40.000 0.00 0.00 0.00 3.51
4392 7979 0.548031 TGGCATCCCCAAGCTTAGAG 59.452 55.000 0.00 0.00 41.82 2.43
4393 7980 0.821301 GGCATCCCCAAGCTTAGAGC 60.821 60.000 0.00 3.01 42.84 4.09
4394 7981 0.107017 GCATCCCCAAGCTTAGAGCA 60.107 55.000 0.00 0.00 45.56 4.26
4395 7982 1.478288 GCATCCCCAAGCTTAGAGCAT 60.478 52.381 0.00 0.00 45.56 3.79
4396 7983 2.502295 CATCCCCAAGCTTAGAGCATC 58.498 52.381 0.00 0.00 45.56 3.91
4407 7994 4.740235 GAGCATCTACAGCCGGAC 57.260 61.111 5.05 0.00 0.00 4.79
4408 7995 1.816537 GAGCATCTACAGCCGGACA 59.183 57.895 5.05 0.00 0.00 4.02
4409 7996 0.390860 GAGCATCTACAGCCGGACAT 59.609 55.000 5.05 0.00 0.00 3.06
4410 7997 0.833287 AGCATCTACAGCCGGACATT 59.167 50.000 5.05 0.00 0.00 2.71
4411 7998 0.940126 GCATCTACAGCCGGACATTG 59.060 55.000 5.05 0.00 0.00 2.82
4412 7999 0.940126 CATCTACAGCCGGACATTGC 59.060 55.000 5.05 0.00 0.00 3.56
4413 8000 0.541392 ATCTACAGCCGGACATTGCA 59.459 50.000 5.05 0.00 0.00 4.08
4414 8001 0.323302 TCTACAGCCGGACATTGCAA 59.677 50.000 5.05 0.00 0.00 4.08
4415 8002 1.164411 CTACAGCCGGACATTGCAAA 58.836 50.000 5.05 0.00 0.00 3.68
4416 8003 1.745087 CTACAGCCGGACATTGCAAAT 59.255 47.619 5.05 0.00 0.00 2.32
4417 8004 0.527565 ACAGCCGGACATTGCAAATC 59.472 50.000 5.05 4.20 0.00 2.17
4418 8005 0.179129 CAGCCGGACATTGCAAATCC 60.179 55.000 18.84 18.84 0.00 3.01
4422 8009 1.141665 GGACATTGCAAATCCGGGC 59.858 57.895 15.25 0.00 0.00 6.13
4423 8010 1.141665 GACATTGCAAATCCGGGCC 59.858 57.895 1.71 0.00 0.00 5.80
4424 8011 2.296814 GACATTGCAAATCCGGGCCC 62.297 60.000 13.57 13.57 0.00 5.80
4425 8012 2.059786 CATTGCAAATCCGGGCCCT 61.060 57.895 22.43 0.00 0.00 5.19
4426 8013 1.758122 ATTGCAAATCCGGGCCCTC 60.758 57.895 22.43 0.00 0.00 4.30
4427 8014 2.512986 ATTGCAAATCCGGGCCCTCA 62.513 55.000 22.43 6.02 0.00 3.86
4428 8015 2.362375 GCAAATCCGGGCCCTCAA 60.362 61.111 22.43 4.96 0.00 3.02
4429 8016 1.981853 GCAAATCCGGGCCCTCAAA 60.982 57.895 22.43 1.98 0.00 2.69
4430 8017 1.890174 CAAATCCGGGCCCTCAAAC 59.110 57.895 22.43 0.00 0.00 2.93
4431 8018 0.897863 CAAATCCGGGCCCTCAAACA 60.898 55.000 22.43 0.00 0.00 2.83
4432 8019 0.041090 AAATCCGGGCCCTCAAACAT 59.959 50.000 22.43 0.00 0.00 2.71
4433 8020 0.395724 AATCCGGGCCCTCAAACATC 60.396 55.000 22.43 0.00 0.00 3.06
4434 8021 2.284515 ATCCGGGCCCTCAAACATCC 62.285 60.000 22.43 0.00 0.00 3.51
4435 8022 2.824041 CGGGCCCTCAAACATCCG 60.824 66.667 22.43 0.00 0.00 4.18
4436 8023 3.140814 GGGCCCTCAAACATCCGC 61.141 66.667 17.04 0.00 0.00 5.54
4437 8024 3.508840 GGCCCTCAAACATCCGCG 61.509 66.667 0.00 0.00 0.00 6.46
4438 8025 3.508840 GCCCTCAAACATCCGCGG 61.509 66.667 22.12 22.12 0.00 6.46
4439 8026 2.267642 CCCTCAAACATCCGCGGA 59.732 61.111 33.12 33.12 0.00 5.54
4440 8027 2.106683 CCCTCAAACATCCGCGGAC 61.107 63.158 33.75 0.00 0.00 4.79
4441 8028 2.452813 CCTCAAACATCCGCGGACG 61.453 63.158 33.75 27.50 39.67 4.79
4442 8029 3.083600 CTCAAACATCCGCGGACGC 62.084 63.158 33.75 6.63 38.22 5.19
4443 8030 3.418913 CAAACATCCGCGGACGCA 61.419 61.111 33.75 8.80 42.06 5.24
4444 8031 2.435938 AAACATCCGCGGACGCAT 60.436 55.556 33.75 12.57 42.06 4.73
4445 8032 2.461110 AAACATCCGCGGACGCATC 61.461 57.895 33.75 0.00 42.06 3.91
4446 8033 2.852495 AAACATCCGCGGACGCATCT 62.852 55.000 33.75 11.17 42.06 2.90
4447 8034 3.333189 CATCCGCGGACGCATCTG 61.333 66.667 33.75 20.36 42.06 2.90
4458 8045 3.503363 GCATCTGCGGGCAGTGAC 61.503 66.667 19.21 7.10 43.96 3.67
4459 8046 2.267006 CATCTGCGGGCAGTGACT 59.733 61.111 19.21 2.02 43.96 3.41
4460 8047 1.517361 CATCTGCGGGCAGTGACTA 59.483 57.895 19.21 1.16 43.96 2.59
4461 8048 0.108186 CATCTGCGGGCAGTGACTAA 60.108 55.000 19.21 0.44 43.96 2.24
4462 8049 0.176680 ATCTGCGGGCAGTGACTAAG 59.823 55.000 19.21 0.00 43.96 2.18
4463 8050 2.047274 TGCGGGCAGTGACTAAGC 60.047 61.111 0.00 0.00 0.00 3.09
4464 8051 2.047274 GCGGGCAGTGACTAAGCA 60.047 61.111 0.00 0.00 0.00 3.91
4465 8052 1.450312 GCGGGCAGTGACTAAGCAT 60.450 57.895 0.00 0.00 0.00 3.79
4466 8053 1.709147 GCGGGCAGTGACTAAGCATG 61.709 60.000 0.00 0.00 0.00 4.06
4467 8054 1.709147 CGGGCAGTGACTAAGCATGC 61.709 60.000 10.51 10.51 36.16 4.06
4469 8056 3.165606 GCAGTGACTAAGCATGCCT 57.834 52.632 15.66 3.39 0.00 4.75
4470 8057 1.012841 GCAGTGACTAAGCATGCCTC 58.987 55.000 15.66 4.71 0.00 4.70
4471 8058 1.676916 GCAGTGACTAAGCATGCCTCA 60.677 52.381 15.66 7.46 0.00 3.86
4472 8059 2.703416 CAGTGACTAAGCATGCCTCAA 58.297 47.619 15.66 0.00 0.00 3.02
4473 8060 3.076621 CAGTGACTAAGCATGCCTCAAA 58.923 45.455 15.66 0.00 0.00 2.69
4474 8061 3.693085 CAGTGACTAAGCATGCCTCAAAT 59.307 43.478 15.66 0.00 0.00 2.32
4475 8062 4.157289 CAGTGACTAAGCATGCCTCAAATT 59.843 41.667 15.66 3.20 0.00 1.82
4476 8063 5.355071 CAGTGACTAAGCATGCCTCAAATTA 59.645 40.000 15.66 4.33 0.00 1.40
4477 8064 5.587844 AGTGACTAAGCATGCCTCAAATTAG 59.412 40.000 15.66 16.13 0.00 1.73
4478 8065 5.355350 GTGACTAAGCATGCCTCAAATTAGT 59.645 40.000 21.17 21.17 36.46 2.24
4479 8066 5.586243 TGACTAAGCATGCCTCAAATTAGTC 59.414 40.000 29.92 29.92 44.64 2.59
4480 8067 5.500234 ACTAAGCATGCCTCAAATTAGTCA 58.500 37.500 15.66 0.00 29.80 3.41
4481 8068 4.708726 AAGCATGCCTCAAATTAGTCAC 57.291 40.909 15.66 0.00 0.00 3.67
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 4.619227 ACACCGGTGGTTGCGGAG 62.619 66.667 36.47 10.44 31.02 4.63
3 4 3.700831 AAACACCGGTGGTTGCGGA 62.701 57.895 36.28 0.00 39.36 5.54
4 5 3.213402 AAACACCGGTGGTTGCGG 61.213 61.111 36.28 10.93 39.36 5.69
8 9 2.159028 CCAATTTCAAACACCGGTGGTT 60.159 45.455 36.47 34.41 41.99 3.67
9 10 1.410882 CCAATTTCAAACACCGGTGGT 59.589 47.619 36.47 30.56 35.62 4.16
10 11 1.270041 CCCAATTTCAAACACCGGTGG 60.270 52.381 36.47 20.25 34.19 4.61
11 12 1.270041 CCCCAATTTCAAACACCGGTG 60.270 52.381 32.83 32.83 0.00 4.94
12 13 1.044611 CCCCAATTTCAAACACCGGT 58.955 50.000 0.00 0.00 0.00 5.28
13 14 0.320334 GCCCCAATTTCAAACACCGG 60.320 55.000 0.00 0.00 0.00 5.28
14 15 0.320334 GGCCCCAATTTCAAACACCG 60.320 55.000 0.00 0.00 0.00 4.94
15 16 0.320334 CGGCCCCAATTTCAAACACC 60.320 55.000 0.00 0.00 0.00 4.16
16 17 0.948623 GCGGCCCCAATTTCAAACAC 60.949 55.000 0.00 0.00 0.00 3.32
17 18 1.369321 GCGGCCCCAATTTCAAACA 59.631 52.632 0.00 0.00 0.00 2.83
18 19 1.375396 GGCGGCCCCAATTTCAAAC 60.375 57.895 8.12 0.00 0.00 2.93
19 20 2.936912 CGGCGGCCCCAATTTCAAA 61.937 57.895 14.55 0.00 0.00 2.69
20 21 3.377759 CGGCGGCCCCAATTTCAA 61.378 61.111 14.55 0.00 0.00 2.69
40 41 2.125673 AAATCCAGGCGTCGTCCG 60.126 61.111 0.00 0.00 40.40 4.79
41 42 2.165301 CGAAATCCAGGCGTCGTCC 61.165 63.158 0.00 0.00 0.00 4.79
42 43 0.734942 TTCGAAATCCAGGCGTCGTC 60.735 55.000 0.00 0.00 35.09 4.20
43 44 0.108329 ATTCGAAATCCAGGCGTCGT 60.108 50.000 0.00 0.00 35.09 4.34
44 45 1.004927 GAATTCGAAATCCAGGCGTCG 60.005 52.381 0.00 0.00 34.85 5.12
45 46 2.280628 AGAATTCGAAATCCAGGCGTC 58.719 47.619 9.60 0.00 0.00 5.19
46 47 2.280628 GAGAATTCGAAATCCAGGCGT 58.719 47.619 9.60 0.00 0.00 5.68
59 60 3.617538 CGGCCGACGCGAGAATTC 61.618 66.667 24.07 0.00 35.02 2.17
77 78 3.822192 TCCTCGTCGGCATCGGTG 61.822 66.667 0.00 0.00 36.95 4.94
78 79 3.823330 GTCCTCGTCGGCATCGGT 61.823 66.667 0.00 0.00 36.95 4.69
79 80 4.570663 GGTCCTCGTCGGCATCGG 62.571 72.222 0.00 0.00 36.95 4.18
80 81 4.570663 GGGTCCTCGTCGGCATCG 62.571 72.222 0.00 0.00 37.82 3.84
81 82 3.148279 AGGGTCCTCGTCGGCATC 61.148 66.667 0.00 0.00 0.00 3.91
82 83 3.461773 CAGGGTCCTCGTCGGCAT 61.462 66.667 0.00 0.00 0.00 4.40
90 91 4.767255 CTGTGGCGCAGGGTCCTC 62.767 72.222 20.17 0.00 41.42 3.71
102 103 2.203538 AAGTTGCCCTGCCTGTGG 60.204 61.111 0.00 0.00 0.00 4.17
103 104 3.045142 CAAGTTGCCCTGCCTGTG 58.955 61.111 0.00 0.00 0.00 3.66
104 105 2.914097 GCAAGTTGCCCTGCCTGT 60.914 61.111 17.36 0.00 37.42 4.00
105 106 4.047059 CGCAAGTTGCCCTGCCTG 62.047 66.667 21.84 2.27 41.12 4.85
117 118 2.544685 CAGTAGGAGGATCAACGCAAG 58.455 52.381 0.00 0.00 40.26 4.01
118 119 1.405526 GCAGTAGGAGGATCAACGCAA 60.406 52.381 0.00 0.00 36.25 4.85
119 120 0.175760 GCAGTAGGAGGATCAACGCA 59.824 55.000 0.00 0.00 36.25 5.24
120 121 0.530870 GGCAGTAGGAGGATCAACGC 60.531 60.000 0.00 0.00 36.25 4.84
121 122 1.115467 AGGCAGTAGGAGGATCAACG 58.885 55.000 0.00 0.00 36.25 4.10
122 123 2.237392 ACAAGGCAGTAGGAGGATCAAC 59.763 50.000 0.00 0.00 36.25 3.18
123 124 2.501723 GACAAGGCAGTAGGAGGATCAA 59.498 50.000 0.00 0.00 36.25 2.57
124 125 2.111384 GACAAGGCAGTAGGAGGATCA 58.889 52.381 0.00 0.00 36.25 2.92
125 126 1.414550 GGACAAGGCAGTAGGAGGATC 59.585 57.143 0.00 0.00 0.00 3.36
126 127 1.008938 AGGACAAGGCAGTAGGAGGAT 59.991 52.381 0.00 0.00 0.00 3.24
127 128 0.413832 AGGACAAGGCAGTAGGAGGA 59.586 55.000 0.00 0.00 0.00 3.71
128 129 2.035632 CTAGGACAAGGCAGTAGGAGG 58.964 57.143 0.00 0.00 0.00 4.30
129 130 2.035632 CCTAGGACAAGGCAGTAGGAG 58.964 57.143 1.05 0.00 33.33 3.69
130 131 2.160721 CCTAGGACAAGGCAGTAGGA 57.839 55.000 1.05 0.00 33.33 2.94
138 139 0.831307 GTAGGTGGCCTAGGACAAGG 59.169 60.000 22.11 0.00 36.71 3.61
139 140 0.831307 GGTAGGTGGCCTAGGACAAG 59.169 60.000 22.11 0.00 36.71 3.16
140 141 0.117541 TGGTAGGTGGCCTAGGACAA 59.882 55.000 22.11 0.00 36.71 3.18
141 142 0.616679 GTGGTAGGTGGCCTAGGACA 60.617 60.000 15.37 15.37 36.71 4.02
142 143 1.335882 GGTGGTAGGTGGCCTAGGAC 61.336 65.000 14.75 11.51 36.71 3.85
143 144 1.002533 GGTGGTAGGTGGCCTAGGA 59.997 63.158 14.75 0.00 36.71 2.94
144 145 1.003051 AGGTGGTAGGTGGCCTAGG 59.997 63.158 3.67 3.67 36.71 3.02
145 146 1.338136 CCAGGTGGTAGGTGGCCTAG 61.338 65.000 3.32 0.00 36.71 3.02
146 147 1.306654 CCAGGTGGTAGGTGGCCTA 60.307 63.158 3.32 0.00 34.61 3.93
147 148 2.610859 CCAGGTGGTAGGTGGCCT 60.611 66.667 3.32 0.00 37.71 5.19
150 151 4.778143 GCGCCAGGTGGTAGGTGG 62.778 72.222 1.11 0.00 35.95 4.61
151 152 3.958147 CTGCGCCAGGTGGTAGGTG 62.958 68.421 4.18 0.00 38.43 4.00
152 153 3.706373 CTGCGCCAGGTGGTAGGT 61.706 66.667 4.18 0.00 37.57 3.08
153 154 4.473520 CCTGCGCCAGGTGGTAGG 62.474 72.222 4.18 0.00 45.82 3.18
166 167 4.864334 CCTCGGTGATGGCCCTGC 62.864 72.222 0.00 0.00 0.00 4.85
167 168 4.864334 GCCTCGGTGATGGCCCTG 62.864 72.222 0.00 0.00 43.11 4.45
180 181 0.737715 AAGATGTTCGCGAGTGCCTC 60.738 55.000 9.59 6.73 38.08 4.70
181 182 0.320771 AAAGATGTTCGCGAGTGCCT 60.321 50.000 9.59 3.01 38.08 4.75
182 183 0.517316 AAAAGATGTTCGCGAGTGCC 59.483 50.000 9.59 0.40 38.08 5.01
183 184 1.194547 TCAAAAGATGTTCGCGAGTGC 59.805 47.619 9.59 4.61 37.91 4.40
184 185 2.718789 CGTCAAAAGATGTTCGCGAGTG 60.719 50.000 9.59 0.00 0.00 3.51
185 186 1.455786 CGTCAAAAGATGTTCGCGAGT 59.544 47.619 9.59 0.00 0.00 4.18
186 187 1.201812 CCGTCAAAAGATGTTCGCGAG 60.202 52.381 9.59 0.00 0.00 5.03
187 188 0.787787 CCGTCAAAAGATGTTCGCGA 59.212 50.000 3.71 3.71 0.00 5.87
188 189 0.789383 GCCGTCAAAAGATGTTCGCG 60.789 55.000 0.00 0.00 0.00 5.87
189 190 0.789383 CGCCGTCAAAAGATGTTCGC 60.789 55.000 0.00 0.00 0.00 4.70
190 191 0.787787 TCGCCGTCAAAAGATGTTCG 59.212 50.000 0.00 0.00 0.00 3.95
191 192 1.128692 CCTCGCCGTCAAAAGATGTTC 59.871 52.381 0.00 0.00 0.00 3.18
192 193 1.156736 CCTCGCCGTCAAAAGATGTT 58.843 50.000 0.00 0.00 0.00 2.71
193 194 0.320374 TCCTCGCCGTCAAAAGATGT 59.680 50.000 0.00 0.00 0.00 3.06
194 195 1.002366 CTCCTCGCCGTCAAAAGATG 58.998 55.000 0.00 0.00 0.00 2.90
195 196 0.108138 CCTCCTCGCCGTCAAAAGAT 60.108 55.000 0.00 0.00 0.00 2.40
196 197 1.292223 CCTCCTCGCCGTCAAAAGA 59.708 57.895 0.00 0.00 0.00 2.52
197 198 1.741770 CCCTCCTCGCCGTCAAAAG 60.742 63.158 0.00 0.00 0.00 2.27
198 199 2.345991 CCCTCCTCGCCGTCAAAA 59.654 61.111 0.00 0.00 0.00 2.44
199 200 3.702048 CCCCTCCTCGCCGTCAAA 61.702 66.667 0.00 0.00 0.00 2.69
236 237 0.832626 ATGATGCTGACGATCCACCA 59.167 50.000 0.00 0.00 0.00 4.17
286 287 5.036916 TCCCATTAGGATTGTCTAGTTGGT 58.963 41.667 0.00 0.00 40.93 3.67
308 312 1.003839 TGCGGGGTGAAGTGTGATC 60.004 57.895 0.00 0.00 0.00 2.92
320 324 4.411256 TTAGTTTCCTATTAGTGCGGGG 57.589 45.455 0.00 0.00 0.00 5.73
321 325 5.855045 AGATTAGTTTCCTATTAGTGCGGG 58.145 41.667 0.00 0.00 0.00 6.13
322 326 7.883217 TCTAGATTAGTTTCCTATTAGTGCGG 58.117 38.462 0.00 0.00 0.00 5.69
323 327 9.182933 GTTCTAGATTAGTTTCCTATTAGTGCG 57.817 37.037 0.00 0.00 0.00 5.34
367 371 5.703592 ACGTGCCAAAAGTGTATTTATCTGA 59.296 36.000 0.00 0.00 0.00 3.27
390 394 4.641989 AGGAAGTGTGATTGCAATATCCAC 59.358 41.667 12.97 16.24 0.00 4.02
445 452 8.658609 CAGACATTTTCACATGTTCAAGTTTTT 58.341 29.630 0.00 0.00 37.52 1.94
836 876 1.867363 AAGCACTAGTCCTGGTAGGG 58.133 55.000 0.00 0.00 35.59 3.53
838 878 2.168728 GGGAAAGCACTAGTCCTGGTAG 59.831 54.545 0.00 0.00 0.00 3.18
839 879 2.185387 GGGAAAGCACTAGTCCTGGTA 58.815 52.381 0.00 0.00 0.00 3.25
840 880 0.984995 GGGAAAGCACTAGTCCTGGT 59.015 55.000 0.00 0.00 0.00 4.00
842 882 0.984230 TGGGGAAAGCACTAGTCCTG 59.016 55.000 0.00 0.00 0.00 3.86
1086 2610 0.605589 CAACCTCCTCGAGCTTCACT 59.394 55.000 6.99 0.00 0.00 3.41
1113 2637 2.987547 TCGTCCTCTTCGCCGGTT 60.988 61.111 1.90 0.00 0.00 4.44
1188 2712 0.529773 CGGATCGGGCAAGATCGAAA 60.530 55.000 13.53 0.00 45.90 3.46
1189 2713 1.067416 CGGATCGGGCAAGATCGAA 59.933 57.895 13.53 0.00 45.90 3.71
1268 2792 1.646189 GGTAGAGCTTCGCTTTCCTG 58.354 55.000 0.00 0.00 39.88 3.86
1446 2970 1.927371 ACCACCGAAAATTATCCCCCT 59.073 47.619 0.00 0.00 0.00 4.79
1484 3008 2.899303 AAAACACCCCCACCTATCTG 57.101 50.000 0.00 0.00 0.00 2.90
1841 3389 2.263077 GACACTGATGCCGTTCTACTG 58.737 52.381 0.00 0.00 0.00 2.74
1863 3411 5.561679 ACCAGGACATTTTCTTTCTAGGTC 58.438 41.667 0.00 0.00 0.00 3.85
1913 3461 7.581213 AATTAGTGTGTGACATCCAGAAAAA 57.419 32.000 0.00 0.00 0.00 1.94
1918 3466 4.216042 TGCAAATTAGTGTGTGACATCCAG 59.784 41.667 0.00 0.00 0.00 3.86
2077 3833 5.475719 CCATGAAAATCAGTTGCTGAATGT 58.524 37.500 2.80 0.00 44.04 2.71
2112 3868 4.344102 ACTGAGTACTGAGGTTAAGCACAA 59.656 41.667 14.17 0.00 0.00 3.33
2116 3872 5.415077 TGACTACTGAGTACTGAGGTTAAGC 59.585 44.000 14.17 0.00 35.45 3.09
2200 4009 6.363577 TGGCTCAAAATTAATTAGCGAGAG 57.636 37.500 18.55 13.84 33.96 3.20
2319 4134 7.719633 CAGGGCCACTACTACAACAAATAATAT 59.280 37.037 6.18 0.00 0.00 1.28
2382 4197 2.233186 ACGGAGGGAGTACAAGTTTAGC 59.767 50.000 0.00 0.00 0.00 3.09
2392 4207 1.547372 CTTTTTCGGACGGAGGGAGTA 59.453 52.381 0.00 0.00 0.00 2.59
2393 4208 0.320697 CTTTTTCGGACGGAGGGAGT 59.679 55.000 0.00 0.00 0.00 3.85
2394 4209 1.019805 GCTTTTTCGGACGGAGGGAG 61.020 60.000 0.00 0.00 0.00 4.30
2395 4210 1.004200 GCTTTTTCGGACGGAGGGA 60.004 57.895 0.00 0.00 0.00 4.20
2396 4211 0.605589 AAGCTTTTTCGGACGGAGGG 60.606 55.000 0.00 0.00 0.00 4.30
2397 4212 0.517316 CAAGCTTTTTCGGACGGAGG 59.483 55.000 0.00 0.00 0.00 4.30
2398 4213 1.194772 GACAAGCTTTTTCGGACGGAG 59.805 52.381 0.00 0.00 0.00 4.63
2399 4214 1.223187 GACAAGCTTTTTCGGACGGA 58.777 50.000 0.00 0.00 0.00 4.69
2400 4215 0.237498 GGACAAGCTTTTTCGGACGG 59.763 55.000 0.00 0.00 0.00 4.79
2401 4216 0.237498 GGGACAAGCTTTTTCGGACG 59.763 55.000 0.00 0.00 0.00 4.79
2402 4217 1.314730 TGGGACAAGCTTTTTCGGAC 58.685 50.000 0.00 0.00 31.92 4.79
2403 4218 3.811031 TGGGACAAGCTTTTTCGGA 57.189 47.368 0.00 0.00 31.92 4.55
2415 4230 1.133181 TGATGGACAGGCTTGGGACA 61.133 55.000 0.00 0.00 0.00 4.02
2416 4231 0.038166 TTGATGGACAGGCTTGGGAC 59.962 55.000 0.00 0.00 0.00 4.46
2417 4232 0.776810 TTTGATGGACAGGCTTGGGA 59.223 50.000 0.00 0.00 0.00 4.37
2418 4233 1.479323 CATTTGATGGACAGGCTTGGG 59.521 52.381 0.00 0.00 0.00 4.12
2419 4234 2.953466 CATTTGATGGACAGGCTTGG 57.047 50.000 0.00 0.00 0.00 3.61
2431 4246 8.654997 AGTTAGTGCTAGATACATCCATTTGAT 58.345 33.333 0.00 0.00 0.00 2.57
2432 4247 8.023021 AGTTAGTGCTAGATACATCCATTTGA 57.977 34.615 0.00 0.00 0.00 2.69
2433 4248 8.554528 CAAGTTAGTGCTAGATACATCCATTTG 58.445 37.037 0.00 0.00 0.00 2.32
2434 4249 7.716998 CCAAGTTAGTGCTAGATACATCCATTT 59.283 37.037 0.00 0.00 0.00 2.32
2435 4250 7.147479 ACCAAGTTAGTGCTAGATACATCCATT 60.147 37.037 0.00 0.00 0.00 3.16
2436 4251 6.327626 ACCAAGTTAGTGCTAGATACATCCAT 59.672 38.462 0.00 0.00 0.00 3.41
2437 4252 5.661312 ACCAAGTTAGTGCTAGATACATCCA 59.339 40.000 0.00 0.00 0.00 3.41
2438 4253 5.986135 CACCAAGTTAGTGCTAGATACATCC 59.014 44.000 0.00 0.00 0.00 3.51
2450 4265 7.041721 TGAATGTATCTAGCACCAAGTTAGTG 58.958 38.462 0.00 0.00 38.30 2.74
2451 4266 7.182817 TGAATGTATCTAGCACCAAGTTAGT 57.817 36.000 0.00 0.00 33.25 2.24
2452 4267 8.668510 AATGAATGTATCTAGCACCAAGTTAG 57.331 34.615 0.00 0.00 32.79 2.34
2453 4268 8.892723 CAAATGAATGTATCTAGCACCAAGTTA 58.107 33.333 0.00 0.00 0.00 2.24
2454 4269 7.611467 TCAAATGAATGTATCTAGCACCAAGTT 59.389 33.333 0.00 0.00 0.00 2.66
2455 4270 7.112122 TCAAATGAATGTATCTAGCACCAAGT 58.888 34.615 0.00 0.00 0.00 3.16
2456 4271 7.255035 CCTCAAATGAATGTATCTAGCACCAAG 60.255 40.741 0.00 0.00 0.00 3.61
2457 4272 6.543465 CCTCAAATGAATGTATCTAGCACCAA 59.457 38.462 0.00 0.00 0.00 3.67
2458 4273 6.057533 CCTCAAATGAATGTATCTAGCACCA 58.942 40.000 0.00 0.00 0.00 4.17
2459 4274 5.471456 CCCTCAAATGAATGTATCTAGCACC 59.529 44.000 0.00 0.00 0.00 5.01
2460 4275 6.203723 GTCCCTCAAATGAATGTATCTAGCAC 59.796 42.308 0.00 0.00 0.00 4.40
2461 4276 6.126796 TGTCCCTCAAATGAATGTATCTAGCA 60.127 38.462 0.00 0.00 0.00 3.49
2462 4277 6.291377 TGTCCCTCAAATGAATGTATCTAGC 58.709 40.000 0.00 0.00 0.00 3.42
2463 4278 7.989741 ACTTGTCCCTCAAATGAATGTATCTAG 59.010 37.037 0.00 0.00 35.48 2.43
2464 4279 7.861629 ACTTGTCCCTCAAATGAATGTATCTA 58.138 34.615 0.00 0.00 35.48 1.98
2465 4280 6.725364 ACTTGTCCCTCAAATGAATGTATCT 58.275 36.000 0.00 0.00 35.48 1.98
2466 4281 7.396540 AACTTGTCCCTCAAATGAATGTATC 57.603 36.000 0.00 0.00 35.48 2.24
2467 4282 7.781324 AAACTTGTCCCTCAAATGAATGTAT 57.219 32.000 0.00 0.00 35.48 2.29
2468 4283 7.595819 AAAACTTGTCCCTCAAATGAATGTA 57.404 32.000 0.00 0.00 35.48 2.29
2469 4284 6.484364 AAAACTTGTCCCTCAAATGAATGT 57.516 33.333 0.00 0.00 35.48 2.71
2490 4305 1.547372 CTACTCCCTCCGTCCGAAAAA 59.453 52.381 0.00 0.00 0.00 1.94
2491 4306 1.180029 CTACTCCCTCCGTCCGAAAA 58.820 55.000 0.00 0.00 0.00 2.29
2492 4307 1.318158 GCTACTCCCTCCGTCCGAAA 61.318 60.000 0.00 0.00 0.00 3.46
2493 4308 1.751927 GCTACTCCCTCCGTCCGAA 60.752 63.158 0.00 0.00 0.00 4.30
2494 4309 2.124403 GCTACTCCCTCCGTCCGA 60.124 66.667 0.00 0.00 0.00 4.55
2495 4310 1.601419 TTTGCTACTCCCTCCGTCCG 61.601 60.000 0.00 0.00 0.00 4.79
2496 4311 0.831307 ATTTGCTACTCCCTCCGTCC 59.169 55.000 0.00 0.00 0.00 4.79
2497 4312 2.280628 CAATTTGCTACTCCCTCCGTC 58.719 52.381 0.00 0.00 0.00 4.79
2498 4313 1.628846 ACAATTTGCTACTCCCTCCGT 59.371 47.619 0.00 0.00 0.00 4.69
2499 4314 2.403252 ACAATTTGCTACTCCCTCCG 57.597 50.000 0.00 0.00 0.00 4.63
2500 4315 4.844884 ACTAACAATTTGCTACTCCCTCC 58.155 43.478 0.00 0.00 0.00 4.30
2501 4316 6.174049 AGAACTAACAATTTGCTACTCCCTC 58.826 40.000 0.00 0.00 0.00 4.30
2502 4317 6.128138 AGAACTAACAATTTGCTACTCCCT 57.872 37.500 0.00 0.00 0.00 4.20
2503 4318 6.430000 TGAAGAACTAACAATTTGCTACTCCC 59.570 38.462 0.00 0.00 0.00 4.30
2504 4319 7.435068 TGAAGAACTAACAATTTGCTACTCC 57.565 36.000 0.00 0.00 0.00 3.85
2505 4320 9.730420 TTTTGAAGAACTAACAATTTGCTACTC 57.270 29.630 0.00 0.00 0.00 2.59
2568 4387 4.819630 TGAACTGACCTACATCACAAAACC 59.180 41.667 0.00 0.00 0.00 3.27
2690 4511 7.644945 GCAAATGAATGCAAATTATTTTAGGGC 59.355 33.333 0.00 0.00 45.70 5.19
2714 4535 7.824289 ACTAACATAAAGCTGAATAGAAGTGCA 59.176 33.333 0.00 0.00 0.00 4.57
2872 4693 3.260632 AGGTCCAAAAACTTGCAGTTTGT 59.739 39.130 12.87 6.78 46.78 2.83
2898 4719 9.214957 CTTGTAATATACTTTCACAGTTCCACA 57.785 33.333 0.00 0.00 36.88 4.17
2934 4914 9.778741 TTACATCCATACTCTTGATAATTCACC 57.221 33.333 0.00 0.00 0.00 4.02
2962 4942 2.485814 CCTTGAGCTTTTAGCAGTGTCC 59.514 50.000 1.09 0.00 45.56 4.02
3004 4984 5.556915 TCACTACACAGGAAACCTTTATGG 58.443 41.667 0.00 0.00 42.93 2.74
3153 5134 5.880054 AACATAGCAACGCTCACTTTATT 57.120 34.783 0.00 0.00 40.44 1.40
3394 5375 1.296715 GACCTCCGCCACAGTCAAT 59.703 57.895 0.00 0.00 0.00 2.57
3397 5378 0.534203 TTTTGACCTCCGCCACAGTC 60.534 55.000 0.00 0.00 0.00 3.51
3404 5385 0.036306 TCCTCCTTTTTGACCTCCGC 59.964 55.000 0.00 0.00 0.00 5.54
3430 5411 1.066502 GCAGGAGTCTCCACTTTCTCC 60.067 57.143 21.26 0.00 44.61 3.71
3476 5457 1.744320 GCCGGCCCAAGTTTTCACTT 61.744 55.000 18.11 0.00 44.72 3.16
3486 5467 0.467290 GGATGAAATAGCCGGCCCAA 60.467 55.000 26.15 9.94 0.00 4.12
3487 5468 1.150536 GGATGAAATAGCCGGCCCA 59.849 57.895 26.15 12.66 0.00 5.36
3515 5496 0.319125 GAGTATAGCAGTGCTCCGCC 60.319 60.000 23.64 8.36 40.44 6.13
3516 5497 0.661780 CGAGTATAGCAGTGCTCCGC 60.662 60.000 23.64 12.49 40.44 5.54
3517 5498 0.945099 TCGAGTATAGCAGTGCTCCG 59.055 55.000 23.64 17.30 40.44 4.63
3524 5505 8.635877 AAAATTCACTAGTTCGAGTATAGCAG 57.364 34.615 0.00 0.00 0.00 4.24
3618 5600 4.111916 CACAAACAAACATCCCACAGAAC 58.888 43.478 0.00 0.00 0.00 3.01
3631 5613 1.625818 ACTTGGCCCAACACAAACAAA 59.374 42.857 0.00 0.00 0.00 2.83
3632 5614 1.270907 ACTTGGCCCAACACAAACAA 58.729 45.000 0.00 0.00 0.00 2.83
3647 5629 5.688621 CCATGACTGACACAAATCAAACTTG 59.311 40.000 0.00 0.00 0.00 3.16
3724 5706 8.354711 TCCCAAATAATTGTACAAACATGCTA 57.645 30.769 13.23 0.00 34.97 3.49
3818 5800 0.032130 ATGAAGATATGCGACGCGGT 59.968 50.000 16.14 9.07 0.00 5.68
3819 5801 1.136529 CAATGAAGATATGCGACGCGG 60.137 52.381 16.14 0.00 0.00 6.46
3841 5823 8.298030 TCATGTACTATATCATTGTTCTTGCG 57.702 34.615 0.00 0.00 0.00 4.85
3871 5865 4.074970 CAATGGCCTGACTAAAGTCTTGT 58.925 43.478 3.32 0.00 44.99 3.16
3953 7509 3.212685 CGAACGGAGGGAGTAACTATCT 58.787 50.000 0.00 0.00 0.00 1.98
3954 7510 2.292845 CCGAACGGAGGGAGTAACTATC 59.707 54.545 7.53 0.00 37.50 2.08
3955 7511 2.092212 TCCGAACGGAGGGAGTAACTAT 60.092 50.000 12.04 0.00 39.76 2.12
3956 7512 1.281867 TCCGAACGGAGGGAGTAACTA 59.718 52.381 12.04 0.00 39.76 2.24
3957 7513 0.038744 TCCGAACGGAGGGAGTAACT 59.961 55.000 12.04 0.00 39.76 2.24
3959 7515 0.890683 GTTCCGAACGGAGGGAGTAA 59.109 55.000 15.34 0.00 46.06 2.24
3961 7517 2.281295 GGTTCCGAACGGAGGGAGT 61.281 63.158 15.34 0.00 46.06 3.85
3962 7518 2.577593 GGTTCCGAACGGAGGGAG 59.422 66.667 15.34 0.00 46.06 4.30
3963 7519 3.376078 CGGTTCCGAACGGAGGGA 61.376 66.667 15.34 0.00 46.06 4.20
3964 7520 3.376078 TCGGTTCCGAACGGAGGG 61.376 66.667 15.45 9.34 46.06 4.30
3965 7521 2.126189 GTCGGTTCCGAACGGAGG 60.126 66.667 18.82 9.65 46.06 4.30
3966 7522 2.503375 CGTCGGTTCCGAACGGAG 60.503 66.667 18.82 11.03 46.06 4.63
3967 7523 2.969806 CTCGTCGGTTCCGAACGGA 61.970 63.158 23.71 15.45 43.52 4.69
3968 7524 2.503375 CTCGTCGGTTCCGAACGG 60.503 66.667 23.71 11.59 40.26 4.44
3969 7525 3.170585 GCTCGTCGGTTCCGAACG 61.171 66.667 15.59 18.81 40.26 3.95
3970 7526 2.049802 TGCTCGTCGGTTCCGAAC 60.050 61.111 15.59 2.37 40.26 3.95
3971 7527 2.049802 GTGCTCGTCGGTTCCGAA 60.050 61.111 15.59 0.56 40.26 4.30
3972 7528 2.632544 ATGTGCTCGTCGGTTCCGA 61.633 57.895 10.00 10.00 36.02 4.55
3973 7529 2.126071 ATGTGCTCGTCGGTTCCG 60.126 61.111 4.74 4.74 0.00 4.30
3974 7530 0.949105 AACATGTGCTCGTCGGTTCC 60.949 55.000 0.00 0.00 0.00 3.62
3975 7531 0.438830 GAACATGTGCTCGTCGGTTC 59.561 55.000 0.00 0.00 0.00 3.62
3976 7532 0.949105 GGAACATGTGCTCGTCGGTT 60.949 55.000 3.21 0.00 0.00 4.44
3977 7533 1.374252 GGAACATGTGCTCGTCGGT 60.374 57.895 3.21 0.00 0.00 4.69
3978 7534 2.100631 GGGAACATGTGCTCGTCGG 61.101 63.158 3.21 0.00 0.00 4.79
3979 7535 1.078759 GAGGGAACATGTGCTCGTCG 61.079 60.000 3.21 0.00 0.00 5.12
3980 7536 0.247736 AGAGGGAACATGTGCTCGTC 59.752 55.000 3.21 5.47 0.00 4.20
3981 7537 1.557099 TAGAGGGAACATGTGCTCGT 58.443 50.000 3.21 0.00 0.00 4.18
3982 7538 2.271800 GTTAGAGGGAACATGTGCTCG 58.728 52.381 3.21 0.00 0.00 5.03
3983 7539 2.633488 GGTTAGAGGGAACATGTGCTC 58.367 52.381 3.21 0.00 0.00 4.26
3984 7540 1.066143 CGGTTAGAGGGAACATGTGCT 60.066 52.381 3.21 0.00 0.00 4.40
3985 7541 1.066430 TCGGTTAGAGGGAACATGTGC 60.066 52.381 0.00 0.00 0.00 4.57
3986 7542 2.618053 GTCGGTTAGAGGGAACATGTG 58.382 52.381 0.00 0.00 0.00 3.21
3987 7543 1.203994 CGTCGGTTAGAGGGAACATGT 59.796 52.381 0.00 0.00 0.00 3.21
3988 7544 1.475280 TCGTCGGTTAGAGGGAACATG 59.525 52.381 0.00 0.00 35.58 3.21
3989 7545 1.749634 CTCGTCGGTTAGAGGGAACAT 59.250 52.381 0.00 0.00 35.58 2.71
3990 7546 1.171308 CTCGTCGGTTAGAGGGAACA 58.829 55.000 0.00 0.00 35.58 3.18
3991 7547 0.179142 GCTCGTCGGTTAGAGGGAAC 60.179 60.000 0.00 0.00 35.58 3.62
3992 7548 0.609957 TGCTCGTCGGTTAGAGGGAA 60.610 55.000 0.00 0.00 35.58 3.97
3993 7549 1.001764 TGCTCGTCGGTTAGAGGGA 60.002 57.895 0.00 0.00 35.58 4.20
3994 7550 1.139095 GTGCTCGTCGGTTAGAGGG 59.861 63.158 0.00 0.00 35.58 4.30
3995 7551 0.456221 ATGTGCTCGTCGGTTAGAGG 59.544 55.000 0.00 0.00 35.19 3.69
3996 7552 1.550065 CATGTGCTCGTCGGTTAGAG 58.450 55.000 0.00 0.00 37.54 2.43
3997 7553 0.457853 GCATGTGCTCGTCGGTTAGA 60.458 55.000 0.00 0.00 38.21 2.10
3998 7554 1.421410 GGCATGTGCTCGTCGGTTAG 61.421 60.000 4.84 0.00 41.70 2.34
3999 7555 1.447140 GGCATGTGCTCGTCGGTTA 60.447 57.895 4.84 0.00 41.70 2.85
4000 7556 2.742372 GGCATGTGCTCGTCGGTT 60.742 61.111 4.84 0.00 41.70 4.44
4001 7557 3.649277 GAGGCATGTGCTCGTCGGT 62.649 63.158 4.84 0.00 41.70 4.69
4002 7558 2.887568 GAGGCATGTGCTCGTCGG 60.888 66.667 4.84 0.00 41.70 4.79
4003 7559 2.125952 TGAGGCATGTGCTCGTCG 60.126 61.111 4.84 0.00 41.70 5.12
4004 7560 0.179089 ATCTGAGGCATGTGCTCGTC 60.179 55.000 4.84 1.02 41.70 4.20
4005 7561 1.068281 CTATCTGAGGCATGTGCTCGT 59.932 52.381 4.84 0.00 41.70 4.18
4006 7562 1.068281 ACTATCTGAGGCATGTGCTCG 59.932 52.381 4.84 0.00 41.70 5.03
4007 7563 2.906691 ACTATCTGAGGCATGTGCTC 57.093 50.000 4.84 1.85 41.70 4.26
4008 7564 3.708631 AGTAACTATCTGAGGCATGTGCT 59.291 43.478 4.84 0.00 41.70 4.40
4009 7565 4.054671 GAGTAACTATCTGAGGCATGTGC 58.945 47.826 0.00 0.00 41.14 4.57
4010 7566 4.502259 GGGAGTAACTATCTGAGGCATGTG 60.502 50.000 0.00 0.00 0.00 3.21
4011 7567 3.643792 GGGAGTAACTATCTGAGGCATGT 59.356 47.826 0.00 0.00 0.00 3.21
4012 7568 3.900601 AGGGAGTAACTATCTGAGGCATG 59.099 47.826 0.00 0.00 0.00 4.06
4013 7569 4.156477 GAGGGAGTAACTATCTGAGGCAT 58.844 47.826 0.00 0.00 0.00 4.40
4014 7570 3.567397 GAGGGAGTAACTATCTGAGGCA 58.433 50.000 0.00 0.00 0.00 4.75
4015 7571 2.894765 GGAGGGAGTAACTATCTGAGGC 59.105 54.545 0.00 0.00 0.00 4.70
4016 7572 3.150767 CGGAGGGAGTAACTATCTGAGG 58.849 54.545 0.00 0.00 0.00 3.86
4017 7573 3.822940 ACGGAGGGAGTAACTATCTGAG 58.177 50.000 0.00 0.00 0.00 3.35
4018 7574 3.947612 ACGGAGGGAGTAACTATCTGA 57.052 47.619 0.00 0.00 0.00 3.27
4019 7575 3.952323 TGAACGGAGGGAGTAACTATCTG 59.048 47.826 0.00 0.00 0.00 2.90
4020 7576 4.079901 TCTGAACGGAGGGAGTAACTATCT 60.080 45.833 0.00 0.00 0.00 1.98
4021 7577 4.205587 TCTGAACGGAGGGAGTAACTATC 58.794 47.826 0.00 0.00 0.00 2.08
4022 7578 4.246712 TCTGAACGGAGGGAGTAACTAT 57.753 45.455 0.00 0.00 0.00 2.12
4023 7579 3.726557 TCTGAACGGAGGGAGTAACTA 57.273 47.619 0.00 0.00 0.00 2.24
4024 7580 2.599408 TCTGAACGGAGGGAGTAACT 57.401 50.000 0.00 0.00 0.00 2.24
4025 7581 3.889520 ATTCTGAACGGAGGGAGTAAC 57.110 47.619 0.00 0.00 0.00 2.50
4026 7582 5.021458 AGTAATTCTGAACGGAGGGAGTAA 58.979 41.667 0.00 0.00 0.00 2.24
4027 7583 4.607239 AGTAATTCTGAACGGAGGGAGTA 58.393 43.478 0.00 0.00 0.00 2.59
4028 7584 3.442076 AGTAATTCTGAACGGAGGGAGT 58.558 45.455 0.00 0.00 0.00 3.85
4029 7585 3.489398 CGAGTAATTCTGAACGGAGGGAG 60.489 52.174 0.00 0.00 0.00 4.30
4030 7586 2.426024 CGAGTAATTCTGAACGGAGGGA 59.574 50.000 0.00 0.00 0.00 4.20
4031 7587 2.165845 ACGAGTAATTCTGAACGGAGGG 59.834 50.000 0.00 0.00 0.00 4.30
4032 7588 3.128938 AGACGAGTAATTCTGAACGGAGG 59.871 47.826 0.00 0.00 0.00 4.30
4033 7589 4.358494 AGACGAGTAATTCTGAACGGAG 57.642 45.455 0.00 0.00 0.00 4.63
4034 7590 5.885230 TTAGACGAGTAATTCTGAACGGA 57.115 39.130 0.00 0.00 0.00 4.69
4035 7591 6.939551 TTTTAGACGAGTAATTCTGAACGG 57.060 37.500 0.00 0.00 0.00 4.44
4145 7701 9.782028 CGTTCAGAATTATTTGTCACAAAAATG 57.218 29.630 7.14 0.90 0.00 2.32
4146 7702 8.977505 CCGTTCAGAATTATTTGTCACAAAAAT 58.022 29.630 7.14 6.03 0.00 1.82
4147 7703 8.191446 TCCGTTCAGAATTATTTGTCACAAAAA 58.809 29.630 7.14 3.92 0.00 1.94
4148 7704 7.708051 TCCGTTCAGAATTATTTGTCACAAAA 58.292 30.769 7.14 0.00 0.00 2.44
4149 7705 7.265647 TCCGTTCAGAATTATTTGTCACAAA 57.734 32.000 5.18 5.18 0.00 2.83
4150 7706 6.072728 CCTCCGTTCAGAATTATTTGTCACAA 60.073 38.462 0.00 0.00 0.00 3.33
4151 7707 5.411361 CCTCCGTTCAGAATTATTTGTCACA 59.589 40.000 0.00 0.00 0.00 3.58
4152 7708 5.163754 CCCTCCGTTCAGAATTATTTGTCAC 60.164 44.000 0.00 0.00 0.00 3.67
4153 7709 4.941263 CCCTCCGTTCAGAATTATTTGTCA 59.059 41.667 0.00 0.00 0.00 3.58
4154 7710 5.183228 TCCCTCCGTTCAGAATTATTTGTC 58.817 41.667 0.00 0.00 0.00 3.18
4155 7711 5.174037 TCCCTCCGTTCAGAATTATTTGT 57.826 39.130 0.00 0.00 0.00 2.83
4156 7712 5.186198 ACTCCCTCCGTTCAGAATTATTTG 58.814 41.667 0.00 0.00 0.00 2.32
4157 7713 5.437191 ACTCCCTCCGTTCAGAATTATTT 57.563 39.130 0.00 0.00 0.00 1.40
4158 7714 6.555360 AGATACTCCCTCCGTTCAGAATTATT 59.445 38.462 0.00 0.00 0.00 1.40
4159 7715 6.078664 AGATACTCCCTCCGTTCAGAATTAT 58.921 40.000 0.00 0.00 0.00 1.28
4160 7716 5.455872 AGATACTCCCTCCGTTCAGAATTA 58.544 41.667 0.00 0.00 0.00 1.40
4161 7717 4.290942 AGATACTCCCTCCGTTCAGAATT 58.709 43.478 0.00 0.00 0.00 2.17
4162 7718 3.917300 AGATACTCCCTCCGTTCAGAAT 58.083 45.455 0.00 0.00 0.00 2.40
4163 7719 3.383698 AGATACTCCCTCCGTTCAGAA 57.616 47.619 0.00 0.00 0.00 3.02
4164 7720 3.383698 AAGATACTCCCTCCGTTCAGA 57.616 47.619 0.00 0.00 0.00 3.27
4165 7721 3.447586 TCAAAGATACTCCCTCCGTTCAG 59.552 47.826 0.00 0.00 0.00 3.02
4166 7722 3.437213 TCAAAGATACTCCCTCCGTTCA 58.563 45.455 0.00 0.00 0.00 3.18
4167 7723 4.434520 CTTCAAAGATACTCCCTCCGTTC 58.565 47.826 0.00 0.00 0.00 3.95
4168 7724 3.197983 CCTTCAAAGATACTCCCTCCGTT 59.802 47.826 0.00 0.00 0.00 4.44
4169 7725 2.766828 CCTTCAAAGATACTCCCTCCGT 59.233 50.000 0.00 0.00 0.00 4.69
4170 7726 2.103263 CCCTTCAAAGATACTCCCTCCG 59.897 54.545 0.00 0.00 0.00 4.63
4171 7727 2.439880 CCCCTTCAAAGATACTCCCTCC 59.560 54.545 0.00 0.00 0.00 4.30
4172 7728 2.158740 GCCCCTTCAAAGATACTCCCTC 60.159 54.545 0.00 0.00 0.00 4.30
4173 7729 1.847088 GCCCCTTCAAAGATACTCCCT 59.153 52.381 0.00 0.00 0.00 4.20
4174 7730 1.847088 AGCCCCTTCAAAGATACTCCC 59.153 52.381 0.00 0.00 0.00 4.30
4175 7731 2.924421 CAGCCCCTTCAAAGATACTCC 58.076 52.381 0.00 0.00 0.00 3.85
4176 7732 2.092699 AGCAGCCCCTTCAAAGATACTC 60.093 50.000 0.00 0.00 0.00 2.59
4177 7733 1.918957 AGCAGCCCCTTCAAAGATACT 59.081 47.619 0.00 0.00 0.00 2.12
4178 7734 2.426842 AGCAGCCCCTTCAAAGATAC 57.573 50.000 0.00 0.00 0.00 2.24
4249 7809 8.432110 TCGTATGTCATGCTATGTGTAAATTT 57.568 30.769 0.00 0.00 0.00 1.82
4267 7827 5.063438 CACGGTCTTCATCAAATTCGTATGT 59.937 40.000 0.00 0.00 0.00 2.29
4268 7828 5.492854 CACGGTCTTCATCAAATTCGTATG 58.507 41.667 0.00 0.00 0.00 2.39
4269 7829 4.570772 CCACGGTCTTCATCAAATTCGTAT 59.429 41.667 0.00 0.00 0.00 3.06
4270 7830 3.930229 CCACGGTCTTCATCAAATTCGTA 59.070 43.478 0.00 0.00 0.00 3.43
4271 7831 2.742053 CCACGGTCTTCATCAAATTCGT 59.258 45.455 0.00 0.00 0.00 3.85
4272 7832 3.000041 TCCACGGTCTTCATCAAATTCG 59.000 45.455 0.00 0.00 0.00 3.34
4298 7885 1.142262 TCTGCATGCTATGTGATGCCT 59.858 47.619 20.33 0.00 43.68 4.75
4371 7958 1.106285 CTAAGCTTGGGGATGCCAAC 58.894 55.000 9.86 0.00 0.00 3.77
4392 7979 0.940126 CAATGTCCGGCTGTAGATGC 59.060 55.000 0.00 0.00 0.00 3.91
4393 7980 0.940126 GCAATGTCCGGCTGTAGATG 59.060 55.000 0.00 0.00 0.00 2.90
4394 7981 0.541392 TGCAATGTCCGGCTGTAGAT 59.459 50.000 0.00 0.00 0.00 1.98
4395 7982 0.323302 TTGCAATGTCCGGCTGTAGA 59.677 50.000 0.00 0.00 0.00 2.59
4396 7983 1.164411 TTTGCAATGTCCGGCTGTAG 58.836 50.000 0.00 0.00 0.00 2.74
4397 7984 1.742831 GATTTGCAATGTCCGGCTGTA 59.257 47.619 0.00 0.00 0.00 2.74
4398 7985 0.527565 GATTTGCAATGTCCGGCTGT 59.472 50.000 0.00 0.00 0.00 4.40
4399 7986 0.179129 GGATTTGCAATGTCCGGCTG 60.179 55.000 13.66 0.00 0.00 4.85
4400 7987 2.192605 GGATTTGCAATGTCCGGCT 58.807 52.632 13.66 0.00 0.00 5.52
4401 7988 4.812814 GGATTTGCAATGTCCGGC 57.187 55.556 13.66 0.00 0.00 6.13
4404 7991 1.141665 GCCCGGATTTGCAATGTCC 59.858 57.895 17.27 17.27 0.00 4.02
4405 7992 1.141665 GGCCCGGATTTGCAATGTC 59.858 57.895 0.73 1.56 0.00 3.06
4406 7993 2.358372 GGGCCCGGATTTGCAATGT 61.358 57.895 5.69 0.00 0.00 2.71
4407 7994 2.019897 GAGGGCCCGGATTTGCAATG 62.020 60.000 18.44 0.00 0.00 2.82
4408 7995 1.758122 GAGGGCCCGGATTTGCAAT 60.758 57.895 18.44 0.00 0.00 3.56
4409 7996 2.362375 GAGGGCCCGGATTTGCAA 60.362 61.111 18.44 0.00 0.00 4.08
4410 7997 2.721803 TTTGAGGGCCCGGATTTGCA 62.722 55.000 18.44 4.35 0.00 4.08
4411 7998 1.981853 TTTGAGGGCCCGGATTTGC 60.982 57.895 18.44 0.00 0.00 3.68
4412 7999 0.897863 TGTTTGAGGGCCCGGATTTG 60.898 55.000 18.44 0.00 0.00 2.32
4413 8000 0.041090 ATGTTTGAGGGCCCGGATTT 59.959 50.000 18.44 0.00 0.00 2.17
4414 8001 0.395724 GATGTTTGAGGGCCCGGATT 60.396 55.000 18.44 0.00 0.00 3.01
4415 8002 1.227383 GATGTTTGAGGGCCCGGAT 59.773 57.895 18.44 0.00 0.00 4.18
4416 8003 2.674754 GATGTTTGAGGGCCCGGA 59.325 61.111 18.44 3.31 0.00 5.14
4417 8004 2.440247 GGATGTTTGAGGGCCCGG 60.440 66.667 18.44 0.00 0.00 5.73
4418 8005 2.824041 CGGATGTTTGAGGGCCCG 60.824 66.667 18.44 0.00 0.00 6.13
4419 8006 3.140814 GCGGATGTTTGAGGGCCC 61.141 66.667 16.46 16.46 0.00 5.80
4420 8007 3.508840 CGCGGATGTTTGAGGGCC 61.509 66.667 0.00 0.00 0.00 5.80
4421 8008 3.508840 CCGCGGATGTTTGAGGGC 61.509 66.667 24.07 0.00 0.00 5.19
4422 8009 2.106683 GTCCGCGGATGTTTGAGGG 61.107 63.158 33.58 0.00 0.00 4.30
4423 8010 2.452813 CGTCCGCGGATGTTTGAGG 61.453 63.158 34.37 12.25 0.00 3.86
4424 8011 3.081133 CGTCCGCGGATGTTTGAG 58.919 61.111 34.37 15.34 0.00 3.02
4425 8012 3.115892 GCGTCCGCGGATGTTTGA 61.116 61.111 39.58 12.86 38.78 2.69
4426 8013 3.418913 TGCGTCCGCGGATGTTTG 61.419 61.111 39.58 24.19 45.51 2.93
4441 8028 2.578163 TAGTCACTGCCCGCAGATGC 62.578 60.000 22.97 11.31 46.30 3.91
4442 8029 0.108186 TTAGTCACTGCCCGCAGATG 60.108 55.000 22.97 15.95 46.30 2.90
4443 8030 0.176680 CTTAGTCACTGCCCGCAGAT 59.823 55.000 22.97 8.35 46.30 2.90
4444 8031 1.591703 CTTAGTCACTGCCCGCAGA 59.408 57.895 22.97 0.00 46.30 4.26
4446 8033 2.047274 GCTTAGTCACTGCCCGCA 60.047 61.111 0.00 0.00 0.00 5.69
4447 8034 1.450312 ATGCTTAGTCACTGCCCGC 60.450 57.895 0.00 0.00 0.00 6.13
4448 8035 1.709147 GCATGCTTAGTCACTGCCCG 61.709 60.000 11.37 0.00 0.00 6.13
4449 8036 1.379642 GGCATGCTTAGTCACTGCCC 61.380 60.000 18.92 0.00 45.26 5.36
4450 8037 2.101700 GGCATGCTTAGTCACTGCC 58.898 57.895 18.92 0.00 44.91 4.85
4451 8038 1.012841 GAGGCATGCTTAGTCACTGC 58.987 55.000 18.92 0.00 0.00 4.40
4452 8039 2.391616 TGAGGCATGCTTAGTCACTG 57.608 50.000 18.92 0.00 0.00 3.66
4453 8040 3.423539 TTTGAGGCATGCTTAGTCACT 57.576 42.857 18.92 3.59 0.00 3.41
4454 8041 4.708726 AATTTGAGGCATGCTTAGTCAC 57.291 40.909 18.92 0.00 0.00 3.67
4455 8042 5.500234 ACTAATTTGAGGCATGCTTAGTCA 58.500 37.500 18.92 12.42 0.00 3.41
4456 8043 5.586243 TGACTAATTTGAGGCATGCTTAGTC 59.414 40.000 29.92 29.92 42.43 2.59
4457 8044 5.355350 GTGACTAATTTGAGGCATGCTTAGT 59.645 40.000 21.17 21.17 36.66 2.24
4458 8045 5.814783 GTGACTAATTTGAGGCATGCTTAG 58.185 41.667 18.92 17.37 36.66 2.18
4459 8046 5.818136 GTGACTAATTTGAGGCATGCTTA 57.182 39.130 18.92 6.16 36.66 3.09
4460 8047 4.708726 GTGACTAATTTGAGGCATGCTT 57.291 40.909 18.92 10.66 36.66 3.91


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.