Multiple sequence alignment - TraesCS4D01G193500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G193500 chr4D 100.000 5372 0 0 1 5372 336837365 336842736 0.000000e+00 9921.0
1 TraesCS4D01G193500 chr4D 92.776 263 19 0 4387 4649 497251986 497251724 1.090000e-101 381.0
2 TraesCS4D01G193500 chr4D 91.011 89 7 1 1525 1613 455263432 455263345 9.450000e-23 119.0
3 TraesCS4D01G193500 chr4B 95.761 1840 70 5 1830 3663 415119686 415121523 0.000000e+00 2959.0
4 TraesCS4D01G193500 chr4B 92.746 1544 78 15 1 1524 415117927 415119456 0.000000e+00 2200.0
5 TraesCS4D01G193500 chr4B 97.710 655 12 1 3729 4383 415121845 415122496 0.000000e+00 1123.0
6 TraesCS4D01G193500 chr4B 92.829 251 14 3 4982 5231 415122790 415123037 1.420000e-95 361.0
7 TraesCS4D01G193500 chr4B 89.600 125 11 1 4653 4777 415122527 415122649 2.000000e-34 158.0
8 TraesCS4D01G193500 chr4B 93.827 81 3 2 1638 1717 415119476 415119555 2.630000e-23 121.0
9 TraesCS4D01G193500 chr4B 88.506 87 4 6 1719 1805 415119616 415119696 3.420000e-17 100.0
10 TraesCS4D01G193500 chr4B 88.571 70 6 2 4805 4874 415122645 415122712 3.450000e-12 84.2
11 TraesCS4D01G193500 chr4A 94.489 1887 86 10 1638 3520 136619915 136618043 0.000000e+00 2892.0
12 TraesCS4D01G193500 chr4A 91.916 1002 45 11 510 1481 136620918 136619923 0.000000e+00 1369.0
13 TraesCS4D01G193500 chr4A 93.072 866 41 12 3530 4383 136617672 136616814 0.000000e+00 1249.0
14 TraesCS4D01G193500 chr4A 93.207 368 13 5 4989 5355 136616515 136616159 1.020000e-146 531.0
15 TraesCS4D01G193500 chr4A 91.339 381 30 2 1 381 136621962 136621585 7.980000e-143 518.0
16 TraesCS4D01G193500 chr4A 93.846 130 8 0 276 405 136621584 136621455 4.240000e-46 196.0
17 TraesCS4D01G193500 chr4A 94.624 93 3 1 4646 4738 136616786 136616696 5.610000e-30 143.0
18 TraesCS4D01G193500 chr4A 92.045 88 7 0 421 508 136621132 136621045 2.030000e-24 124.0
19 TraesCS4D01G193500 chr1D 96.198 263 9 1 4387 4648 413416515 413416253 3.840000e-116 429.0
20 TraesCS4D01G193500 chr1D 91.954 87 7 0 1523 1609 464622232 464622318 7.310000e-24 122.0
21 TraesCS4D01G193500 chr1D 81.295 139 26 0 4215 4353 312970145 312970283 4.400000e-21 113.0
22 TraesCS4D01G193500 chr1D 78.395 162 31 4 3787 3946 312969687 312969846 9.520000e-18 102.0
23 TraesCS4D01G193500 chr3D 95.437 263 12 0 4387 4649 461592289 461592027 2.310000e-113 420.0
24 TraesCS4D01G193500 chr3D 94.318 264 13 2 4386 4648 51106612 51106874 2.330000e-108 403.0
25 TraesCS4D01G193500 chr3D 93.939 264 15 1 4386 4648 346865212 346865475 1.080000e-106 398.0
26 TraesCS4D01G193500 chr3D 93.156 263 17 1 4387 4648 557813854 557813592 8.440000e-103 385.0
27 TraesCS4D01G193500 chr5D 93.585 265 16 1 4385 4648 60522759 60522495 1.400000e-105 394.0
28 TraesCS4D01G193500 chr5D 92.453 53 2 2 3671 3721 522111513 522111461 2.080000e-09 75.0
29 TraesCS4D01G193500 chr5A 92.963 270 17 2 4380 4648 631470299 631470031 5.040000e-105 392.0
30 TraesCS4D01G193500 chr5A 90.370 135 12 1 5016 5149 10860721 10860587 5.530000e-40 176.0
31 TraesCS4D01G193500 chr5A 92.045 88 6 1 1526 1613 402017024 402017110 7.310000e-24 122.0
32 TraesCS4D01G193500 chr5A 87.500 64 4 3 3661 3721 570467335 570467273 2.680000e-08 71.3
33 TraesCS4D01G193500 chrUn 92.803 264 18 1 4387 4649 465849576 465849839 1.090000e-101 381.0
34 TraesCS4D01G193500 chrUn 91.011 89 6 2 1525 1613 104670728 104670814 9.450000e-23 119.0
35 TraesCS4D01G193500 chr2D 76.780 590 114 14 3784 4360 37251917 37251338 5.230000e-80 309.0
36 TraesCS4D01G193500 chr2D 86.928 153 17 3 5016 5166 103129928 103130079 9.250000e-38 169.0
37 TraesCS4D01G193500 chr2D 94.253 87 4 1 1527 1613 483872703 483872788 1.210000e-26 132.0
38 TraesCS4D01G193500 chr2A 75.424 590 122 14 3784 4360 42153027 42152448 1.150000e-66 265.0
39 TraesCS4D01G193500 chr2A 87.755 147 15 3 5016 5160 197222097 197221952 9.250000e-38 169.0
40 TraesCS4D01G193500 chr2A 81.301 123 22 1 36 157 519563436 519563314 1.230000e-16 99.0
41 TraesCS4D01G193500 chr1A 89.286 140 13 2 5016 5153 372248587 372248448 1.990000e-39 174.0
42 TraesCS4D01G193500 chr1A 82.734 139 24 0 4215 4353 392526455 392526593 2.030000e-24 124.0
43 TraesCS4D01G193500 chr1A 77.778 162 32 4 3787 3946 392526003 392526162 4.430000e-16 97.1
44 TraesCS4D01G193500 chr2B 87.333 150 19 0 5017 5166 154500260 154500111 7.150000e-39 172.0
45 TraesCS4D01G193500 chr2B 88.028 142 17 0 5025 5166 154490766 154490625 9.250000e-38 169.0
46 TraesCS4D01G193500 chr2B 88.028 142 17 0 5025 5166 154492042 154491901 9.250000e-38 169.0
47 TraesCS4D01G193500 chr2B 95.294 85 4 0 1525 1609 794912097 794912013 9.390000e-28 135.0
48 TraesCS4D01G193500 chr2B 90.000 60 4 2 3664 3721 736103149 736103208 5.770000e-10 76.8
49 TraesCS4D01G193500 chr6A 89.565 115 10 2 36 148 68566724 68566610 1.560000e-30 145.0
50 TraesCS4D01G193500 chr6A 90.625 64 2 4 3647 3708 25688649 25688588 1.240000e-11 82.4
51 TraesCS4D01G193500 chr6D 87.395 119 12 3 36 152 47189819 47189936 3.380000e-27 134.0
52 TraesCS4D01G193500 chr6D 94.318 88 3 2 1526 1613 151954511 151954426 3.380000e-27 134.0
53 TraesCS4D01G193500 chr6D 92.857 56 2 2 3668 3721 454580597 454580652 4.460000e-11 80.5
54 TraesCS4D01G193500 chr3B 90.217 92 7 2 1522 1613 707007266 707007355 9.450000e-23 119.0
55 TraesCS4D01G193500 chr3B 91.071 56 2 3 3668 3721 293739838 293739892 7.460000e-09 73.1
56 TraesCS4D01G193500 chr1B 91.011 89 7 1 1527 1615 303281359 303281446 9.450000e-23 119.0
57 TraesCS4D01G193500 chr1B 78.947 171 32 4 3787 3955 423206031 423206199 4.400000e-21 113.0
58 TraesCS4D01G193500 chr7A 81.967 122 17 4 40 157 144132764 144132884 1.230000e-16 99.0
59 TraesCS4D01G193500 chr7D 85.227 88 9 4 54 138 550703467 550703553 2.670000e-13 87.9
60 TraesCS4D01G193500 chr7D 92.453 53 2 2 3671 3721 579751348 579751296 2.080000e-09 75.0
61 TraesCS4D01G193500 chr5B 91.379 58 3 2 3666 3721 384559493 384559436 1.600000e-10 78.7
62 TraesCS4D01G193500 chr7B 83.750 80 10 3 62 138 595254960 595255039 7.460000e-09 73.1
63 TraesCS4D01G193500 chr7B 88.333 60 4 3 3671 3727 349396342 349396283 9.650000e-08 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G193500 chr4D 336837365 336842736 5371 False 9921.000 9921 100.00000 1 5372 1 chr4D.!!$F1 5371
1 TraesCS4D01G193500 chr4B 415117927 415123037 5110 False 888.275 2959 92.44375 1 5231 8 chr4B.!!$F1 5230
2 TraesCS4D01G193500 chr4A 136616159 136621962 5803 True 877.750 2892 93.06725 1 5355 8 chr4A.!!$R1 5354
3 TraesCS4D01G193500 chr2D 37251338 37251917 579 True 309.000 309 76.78000 3784 4360 1 chr2D.!!$R1 576
4 TraesCS4D01G193500 chr2A 42152448 42153027 579 True 265.000 265 75.42400 3784 4360 1 chr2A.!!$R1 576

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
976 1519 0.811281 GCGCCTCCACTGCTATTTTT 59.189 50.000 0.00 0.00 0.00 1.94 F
1572 2143 0.179034 GGCCTCTGCATCGGAAAGAT 60.179 55.000 0.00 0.00 41.01 2.40 F
1588 2159 0.394216 AGATGCATGCGGCCACTTTA 60.394 50.000 14.09 0.00 43.89 1.85 F
1589 2160 0.670162 GATGCATGCGGCCACTTTAT 59.330 50.000 14.09 0.00 43.89 1.40 F
1590 2161 1.067516 GATGCATGCGGCCACTTTATT 59.932 47.619 14.09 0.00 43.89 1.40 F
2165 2793 1.190833 AGGACCAGTGTCTGCTCCAG 61.191 60.000 11.95 0.00 38.36 3.86 F
2279 2907 3.054434 TCCACCAATAGTCCTTCCACATG 60.054 47.826 0.00 0.00 0.00 3.21 F
3463 4098 4.155644 CCTAGAACCGTACTCGAGAGTTTT 59.844 45.833 21.68 13.51 42.54 2.43 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2379 3007 0.777446 AAGGAAAGCAGCAACCCCTA 59.223 50.000 0.00 0.0 0.00 3.53 R
3466 4101 3.887716 GCAAATTCTGAGCCATATGAGGT 59.112 43.478 3.65 0.0 0.00 3.85 R
3543 4539 4.033990 TGATTGAGTTTCGAGAGATCGG 57.966 45.455 0.00 0.0 41.60 4.18 R
3544 4540 5.518812 AGATGATTGAGTTTCGAGAGATCG 58.481 41.667 0.00 0.0 41.60 3.69 R
3557 4553 8.768957 TTCTGAACTAACAAGAGATGATTGAG 57.231 34.615 0.00 0.0 0.00 3.02 R
3621 4617 0.743345 GGGGTTCGACCTCCATTTCG 60.743 60.000 0.00 0.0 38.64 3.46 R
3665 4664 1.854939 TGGGACGGAGGGAGTAATAGA 59.145 52.381 0.00 0.0 0.00 1.98 R
5254 6620 0.032416 TCCAGGGTCCAGGCTAGTAC 60.032 60.000 0.00 0.0 0.00 2.73 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
44 45 4.067972 TCGGAGATGCCCTTACATAAAC 57.932 45.455 0.00 0.00 0.00 2.01
48 49 5.408604 CGGAGATGCCCTTACATAAACATAC 59.591 44.000 0.00 0.00 0.00 2.39
50 51 6.428159 GGAGATGCCCTTACATAAACATACAG 59.572 42.308 0.00 0.00 0.00 2.74
151 153 4.000988 TCTCAAATCGTGTTAAAGCTCCC 58.999 43.478 0.00 0.00 0.00 4.30
303 411 2.139917 CGAAACAAGGACCATTGTCGA 58.860 47.619 9.02 0.00 42.49 4.20
405 513 6.428465 TCTTGTACGATACATCCTTTTGCAAA 59.572 34.615 8.05 8.05 38.68 3.68
411 519 6.597672 ACGATACATCCTTTTGCAAATAGACA 59.402 34.615 13.65 0.00 0.00 3.41
416 524 7.147976 ACATCCTTTTGCAAATAGACAACTTC 58.852 34.615 13.65 0.00 0.00 3.01
644 1187 6.899892 AATGAAGAGGAAGGAAATCTAGGT 57.100 37.500 0.00 0.00 0.00 3.08
662 1205 3.751518 AGGTAGTTGGTTCCACAATGAC 58.248 45.455 0.00 0.00 32.24 3.06
665 1208 2.218603 AGTTGGTTCCACAATGACGAC 58.781 47.619 0.00 0.00 32.24 4.34
672 1215 1.621317 TCCACAATGACGACCAAGCTA 59.379 47.619 0.00 0.00 0.00 3.32
679 1222 5.880332 ACAATGACGACCAAGCTACATTAAT 59.120 36.000 0.00 0.00 0.00 1.40
724 1267 6.540189 AGGATGATTAGATCAACGAACCAAAG 59.460 38.462 0.00 0.00 43.50 2.77
775 1318 6.376018 ACCAACTAAAAGCTTCTTGTTGTGTA 59.624 34.615 20.57 0.00 34.70 2.90
808 1351 2.379459 GCCTCCCTTTCCCTCTCCC 61.379 68.421 0.00 0.00 0.00 4.30
976 1519 0.811281 GCGCCTCCACTGCTATTTTT 59.189 50.000 0.00 0.00 0.00 1.94
1005 1548 1.766143 GCAGCGGTTAAGCGATGGAG 61.766 60.000 36.51 19.16 43.00 3.86
1063 1606 2.402572 GCCTTCTCTTGGCGGCTTC 61.403 63.158 11.43 0.00 41.03 3.86
1064 1607 1.003355 CCTTCTCTTGGCGGCTTCA 60.003 57.895 11.43 0.00 0.00 3.02
1065 1608 1.023513 CCTTCTCTTGGCGGCTTCAG 61.024 60.000 11.43 3.70 0.00 3.02
1081 1624 2.270434 TCAGGGAGGAGCAGGTTTAT 57.730 50.000 0.00 0.00 0.00 1.40
1094 1637 6.410942 AGCAGGTTTATTTCTCTTTTGCTT 57.589 33.333 0.00 0.00 36.05 3.91
1112 1655 2.163211 GCTTGAGCTTTGGATTCCTCAC 59.837 50.000 3.95 0.00 34.36 3.51
1122 1665 2.162681 GGATTCCTCACAGTTGTTGGG 58.837 52.381 0.00 0.00 0.00 4.12
1172 1715 2.442830 GCAGGGATTGGGGGCTTC 60.443 66.667 0.00 0.00 0.00 3.86
1229 1772 3.482722 TCTTTTAGTCGTAGGTGAGCG 57.517 47.619 0.00 0.00 0.00 5.03
1251 1794 3.307339 GCTCAGATTCTGGAACTGGTTCT 60.307 47.826 13.59 0.00 39.45 3.01
1252 1795 4.805609 GCTCAGATTCTGGAACTGGTTCTT 60.806 45.833 13.59 0.00 39.45 2.52
1253 1796 5.310409 TCAGATTCTGGAACTGGTTCTTT 57.690 39.130 13.59 0.00 39.45 2.52
1254 1797 5.694995 TCAGATTCTGGAACTGGTTCTTTT 58.305 37.500 13.59 0.00 39.45 2.27
1287 1830 1.031571 TGCAGGAAATGGATCGGTGC 61.032 55.000 0.00 0.00 33.07 5.01
1389 1942 8.819643 TTAGGTAACAAATGCCACAAATTTAC 57.180 30.769 0.00 0.00 35.99 2.01
1418 1989 4.453177 TCATCTCTTGAGCTCTGAACTG 57.547 45.455 16.19 12.12 0.00 3.16
1524 2095 7.933033 TCCGGTTTATTGGATTACTATTGTACC 59.067 37.037 0.00 0.00 0.00 3.34
1525 2096 7.935210 CCGGTTTATTGGATTACTATTGTACCT 59.065 37.037 0.00 0.00 0.00 3.08
1560 2131 3.787001 GACTTCCCCCGGCCTCTG 61.787 72.222 0.00 0.00 0.00 3.35
1568 2139 4.161295 CCGGCCTCTGCATCGGAA 62.161 66.667 0.00 0.00 42.71 4.30
1569 2140 2.125147 CGGCCTCTGCATCGGAAA 60.125 61.111 0.00 0.00 40.13 3.13
1570 2141 2.176273 CGGCCTCTGCATCGGAAAG 61.176 63.158 0.00 0.00 40.13 2.62
1571 2142 1.221840 GGCCTCTGCATCGGAAAGA 59.778 57.895 0.00 0.00 40.13 2.52
1572 2143 0.179034 GGCCTCTGCATCGGAAAGAT 60.179 55.000 0.00 0.00 41.01 2.40
1580 2151 2.324215 ATCGGAAAGATGCATGCGG 58.676 52.632 14.09 0.00 38.36 5.69
1581 2152 1.789078 ATCGGAAAGATGCATGCGGC 61.789 55.000 14.09 7.38 45.13 6.53
1582 2153 2.414594 GGAAAGATGCATGCGGCC 59.585 61.111 14.09 4.40 43.89 6.13
1583 2154 2.417257 GGAAAGATGCATGCGGCCA 61.417 57.895 14.09 0.00 43.89 5.36
1584 2155 1.226773 GAAAGATGCATGCGGCCAC 60.227 57.895 14.09 0.00 43.89 5.01
1585 2156 1.660560 GAAAGATGCATGCGGCCACT 61.661 55.000 14.09 4.75 43.89 4.00
1586 2157 1.252904 AAAGATGCATGCGGCCACTT 61.253 50.000 14.09 10.44 43.89 3.16
1587 2158 1.252904 AAGATGCATGCGGCCACTTT 61.253 50.000 14.09 0.00 43.89 2.66
1588 2159 0.394216 AGATGCATGCGGCCACTTTA 60.394 50.000 14.09 0.00 43.89 1.85
1589 2160 0.670162 GATGCATGCGGCCACTTTAT 59.330 50.000 14.09 0.00 43.89 1.40
1590 2161 1.067516 GATGCATGCGGCCACTTTATT 59.932 47.619 14.09 0.00 43.89 1.40
1591 2162 1.756430 TGCATGCGGCCACTTTATTA 58.244 45.000 14.09 0.00 43.89 0.98
1592 2163 2.095461 TGCATGCGGCCACTTTATTAA 58.905 42.857 14.09 0.00 43.89 1.40
1593 2164 2.493675 TGCATGCGGCCACTTTATTAAA 59.506 40.909 14.09 0.00 43.89 1.52
1594 2165 3.056536 TGCATGCGGCCACTTTATTAAAA 60.057 39.130 14.09 0.00 43.89 1.52
1595 2166 3.305897 GCATGCGGCCACTTTATTAAAAC 59.694 43.478 0.00 0.00 36.11 2.43
1596 2167 4.489810 CATGCGGCCACTTTATTAAAACA 58.510 39.130 2.24 0.00 0.00 2.83
1597 2168 4.585955 TGCGGCCACTTTATTAAAACAA 57.414 36.364 2.24 0.00 0.00 2.83
1598 2169 4.551388 TGCGGCCACTTTATTAAAACAAG 58.449 39.130 2.24 0.00 0.00 3.16
1599 2170 4.038162 TGCGGCCACTTTATTAAAACAAGT 59.962 37.500 2.24 0.00 0.00 3.16
1600 2171 4.986034 GCGGCCACTTTATTAAAACAAGTT 59.014 37.500 2.24 0.00 0.00 2.66
1601 2172 5.118050 GCGGCCACTTTATTAAAACAAGTTC 59.882 40.000 2.24 0.00 0.00 3.01
1602 2173 6.210078 CGGCCACTTTATTAAAACAAGTTCA 58.790 36.000 2.24 0.00 0.00 3.18
1603 2174 6.362283 CGGCCACTTTATTAAAACAAGTTCAG 59.638 38.462 2.24 0.00 0.00 3.02
1604 2175 6.145534 GGCCACTTTATTAAAACAAGTTCAGC 59.854 38.462 0.00 0.00 0.00 4.26
1605 2176 6.699642 GCCACTTTATTAAAACAAGTTCAGCA 59.300 34.615 0.00 0.00 0.00 4.41
1606 2177 7.223777 GCCACTTTATTAAAACAAGTTCAGCAA 59.776 33.333 0.00 0.00 0.00 3.91
1607 2178 9.092876 CCACTTTATTAAAACAAGTTCAGCAAA 57.907 29.630 0.00 0.00 0.00 3.68
1614 2185 6.859420 AAAACAAGTTCAGCAAAAACAAGT 57.141 29.167 0.00 0.00 0.00 3.16
1615 2186 6.859420 AAACAAGTTCAGCAAAAACAAGTT 57.141 29.167 0.00 0.00 31.54 2.66
1616 2187 6.466308 AACAAGTTCAGCAAAAACAAGTTC 57.534 33.333 0.00 0.00 0.00 3.01
1617 2188 5.537188 ACAAGTTCAGCAAAAACAAGTTCA 58.463 33.333 0.00 0.00 0.00 3.18
1618 2189 6.165577 ACAAGTTCAGCAAAAACAAGTTCAT 58.834 32.000 0.00 0.00 0.00 2.57
1619 2190 6.311200 ACAAGTTCAGCAAAAACAAGTTCATC 59.689 34.615 0.00 0.00 0.00 2.92
1620 2191 6.212888 AGTTCAGCAAAAACAAGTTCATCT 57.787 33.333 0.00 0.00 0.00 2.90
1621 2192 6.268566 AGTTCAGCAAAAACAAGTTCATCTC 58.731 36.000 0.00 0.00 0.00 2.75
1622 2193 6.096001 AGTTCAGCAAAAACAAGTTCATCTCT 59.904 34.615 0.00 0.00 0.00 3.10
1623 2194 6.455360 TCAGCAAAAACAAGTTCATCTCTT 57.545 33.333 0.00 0.00 0.00 2.85
1624 2195 6.267817 TCAGCAAAAACAAGTTCATCTCTTG 58.732 36.000 4.45 4.45 45.15 3.02
1625 2196 6.095300 TCAGCAAAAACAAGTTCATCTCTTGA 59.905 34.615 11.72 0.00 43.17 3.02
1626 2197 6.417044 CAGCAAAAACAAGTTCATCTCTTGAG 59.583 38.462 11.72 0.00 43.17 3.02
1627 2198 5.174579 GCAAAAACAAGTTCATCTCTTGAGC 59.825 40.000 11.72 5.03 43.17 4.26
1628 2199 6.501781 CAAAAACAAGTTCATCTCTTGAGCT 58.498 36.000 11.72 0.00 46.67 4.09
1629 2200 5.938438 AAACAAGTTCATCTCTTGAGCTC 57.062 39.130 6.82 6.82 44.25 4.09
1630 2201 4.888326 ACAAGTTCATCTCTTGAGCTCT 57.112 40.909 16.19 0.00 44.25 4.09
1631 2202 4.567971 ACAAGTTCATCTCTTGAGCTCTG 58.432 43.478 16.19 8.09 44.25 3.35
1632 2203 4.282957 ACAAGTTCATCTCTTGAGCTCTGA 59.717 41.667 16.19 12.01 44.25 3.27
1633 2204 5.221601 ACAAGTTCATCTCTTGAGCTCTGAA 60.222 40.000 16.19 12.13 44.25 3.02
1634 2205 4.819769 AGTTCATCTCTTGAGCTCTGAAC 58.180 43.478 25.44 25.44 41.58 3.18
1635 2206 4.527816 AGTTCATCTCTTGAGCTCTGAACT 59.472 41.667 27.95 27.95 41.58 3.01
1636 2207 4.453177 TCATCTCTTGAGCTCTGAACTG 57.547 45.455 16.19 12.12 0.00 3.16
1648 2219 4.036144 AGCTCTGAACTGAACTTTTTGCTC 59.964 41.667 0.00 0.00 0.00 4.26
1682 2253 4.020307 TGCATGTTTATCCACAGAGACAGA 60.020 41.667 0.00 0.00 0.00 3.41
1769 2397 8.094548 GGTTATTTTAGAAAGCCTTGGATTGTT 58.905 33.333 0.00 0.00 0.00 2.83
1800 2428 2.964464 AGATCAGAGATGTGCCACTAGG 59.036 50.000 0.00 0.00 38.23 3.02
1803 2431 2.234661 TCAGAGATGTGCCACTAGGTTG 59.765 50.000 0.00 0.00 37.19 3.77
1805 2433 2.027745 AGAGATGTGCCACTAGGTTGTG 60.028 50.000 0.00 0.00 37.19 3.33
1849 2477 3.307059 GCCACTAGGTTGTTGAGTGAGAT 60.307 47.826 2.89 0.00 42.65 2.75
1854 2482 6.367422 CACTAGGTTGTTGAGTGAGATCTTTC 59.633 42.308 0.00 0.00 42.65 2.62
1856 2484 5.934781 AGGTTGTTGAGTGAGATCTTTCTT 58.065 37.500 0.00 0.00 30.30 2.52
1918 2546 6.417191 TGAAAGAGAAATACGGTATTGCAC 57.583 37.500 18.73 13.35 0.00 4.57
2018 2646 7.124599 ACTTCCATCATCAGAAATGGCAAATAA 59.875 33.333 9.46 0.54 41.88 1.40
2165 2793 1.190833 AGGACCAGTGTCTGCTCCAG 61.191 60.000 11.95 0.00 38.36 3.86
2279 2907 3.054434 TCCACCAATAGTCCTTCCACATG 60.054 47.826 0.00 0.00 0.00 3.21
2379 3007 4.725490 ACAACCTATGGTTTAGTTGCAGT 58.275 39.130 0.00 0.00 44.33 4.40
2524 3152 6.313744 ACAGGTATGCTTTGTTTGTACTTC 57.686 37.500 0.00 0.00 0.00 3.01
2530 3158 7.651704 GGTATGCTTTGTTTGTACTTCAACATT 59.348 33.333 6.66 0.00 35.61 2.71
2542 3170 8.251750 TGTACTTCAACATTTGTGTATCTAGC 57.748 34.615 0.00 0.00 0.00 3.42
2552 3180 7.228507 ACATTTGTGTATCTAGCAGTTTGTTCA 59.771 33.333 0.00 0.00 0.00 3.18
2869 3499 6.507958 TGTTTTCAGATCACAACTTTGTCA 57.492 33.333 0.00 0.00 39.91 3.58
3195 3825 7.105588 TCAGCAAGCAGATTCTAACTGATAAA 58.894 34.615 0.00 0.00 37.54 1.40
3200 3830 9.545105 CAAGCAGATTCTAACTGATAAAGATCT 57.455 33.333 0.00 0.00 37.54 2.75
3373 4006 9.276590 CCAGTGATGTGCTTCATATAATTTCTA 57.723 33.333 0.00 0.00 36.83 2.10
3408 4041 9.665264 GAACAACTCGATTTTAACAAATCTTCT 57.335 29.630 6.21 0.00 44.39 2.85
3463 4098 4.155644 CCTAGAACCGTACTCGAGAGTTTT 59.844 45.833 21.68 13.51 42.54 2.43
3466 4101 4.999950 AGAACCGTACTCGAGAGTTTTCTA 59.000 41.667 21.68 0.00 42.54 2.10
3495 4130 7.442364 TCATATGGCTCAGAATTTGCTACTTAC 59.558 37.037 2.13 0.00 0.00 2.34
3501 4136 7.183433 GCTCAGAATTTGCTACTTACTTTAGC 58.817 38.462 0.00 0.00 42.08 3.09
3515 4150 6.824704 ACTTACTTTAGCGGCATAATTTGGTA 59.175 34.615 1.45 0.00 0.00 3.25
3543 4539 8.575649 TTAATTTCCCCTGTCTTAACTGAATC 57.424 34.615 0.00 0.00 0.00 2.52
3544 4540 4.569719 TTCCCCTGTCTTAACTGAATCC 57.430 45.455 0.00 0.00 0.00 3.01
3665 4664 4.369182 GCCGTCTACTGCATAAGTTGTAT 58.631 43.478 0.00 0.00 40.56 2.29
3666 4665 4.444720 GCCGTCTACTGCATAAGTTGTATC 59.555 45.833 0.00 0.00 40.56 2.24
3667 4666 5.736492 GCCGTCTACTGCATAAGTTGTATCT 60.736 44.000 0.00 0.00 40.56 1.98
3669 4668 7.594714 CCGTCTACTGCATAAGTTGTATCTAT 58.405 38.462 0.00 0.00 40.56 1.98
3670 4669 8.082852 CCGTCTACTGCATAAGTTGTATCTATT 58.917 37.037 0.00 0.00 40.56 1.73
3677 4676 8.492415 TGCATAAGTTGTATCTATTACTCCCT 57.508 34.615 0.00 0.00 0.00 4.20
3678 4677 8.585881 TGCATAAGTTGTATCTATTACTCCCTC 58.414 37.037 0.00 0.00 0.00 4.30
3679 4678 8.035984 GCATAAGTTGTATCTATTACTCCCTCC 58.964 40.741 0.00 0.00 0.00 4.30
3680 4679 6.651975 AAGTTGTATCTATTACTCCCTCCG 57.348 41.667 0.00 0.00 0.00 4.63
3681 4680 5.703310 AGTTGTATCTATTACTCCCTCCGT 58.297 41.667 0.00 0.00 0.00 4.69
3683 4682 4.660168 TGTATCTATTACTCCCTCCGTCC 58.340 47.826 0.00 0.00 0.00 4.79
3684 4683 2.671896 TCTATTACTCCCTCCGTCCC 57.328 55.000 0.00 0.00 0.00 4.46
3685 4684 1.854939 TCTATTACTCCCTCCGTCCCA 59.145 52.381 0.00 0.00 0.00 4.37
3686 4685 2.449730 TCTATTACTCCCTCCGTCCCAT 59.550 50.000 0.00 0.00 0.00 4.00
3687 4686 3.659195 TCTATTACTCCCTCCGTCCCATA 59.341 47.826 0.00 0.00 0.00 2.74
3688 4687 2.852714 TTACTCCCTCCGTCCCATAA 57.147 50.000 0.00 0.00 0.00 1.90
3689 4688 3.339713 TTACTCCCTCCGTCCCATAAT 57.660 47.619 0.00 0.00 0.00 1.28
3691 4690 3.562108 ACTCCCTCCGTCCCATAATAT 57.438 47.619 0.00 0.00 0.00 1.28
3692 4691 4.687262 ACTCCCTCCGTCCCATAATATA 57.313 45.455 0.00 0.00 0.00 0.86
3693 4692 5.019657 ACTCCCTCCGTCCCATAATATAA 57.980 43.478 0.00 0.00 0.00 0.98
3696 4695 5.021458 TCCCTCCGTCCCATAATATAAGAC 58.979 45.833 0.00 0.00 0.00 3.01
3698 4697 4.461781 CCTCCGTCCCATAATATAAGACGT 59.538 45.833 17.31 0.00 46.62 4.34
4383 5655 3.466836 TGACAGCTGAAGTTGTTACTGG 58.533 45.455 23.35 0.00 39.59 4.00
4385 5657 3.733337 ACAGCTGAAGTTGTTACTGGAG 58.267 45.455 23.35 0.00 35.99 3.86
4386 5658 3.134804 ACAGCTGAAGTTGTTACTGGAGT 59.865 43.478 23.35 0.00 35.99 3.85
4388 5660 4.686554 CAGCTGAAGTTGTTACTGGAGTAC 59.313 45.833 8.42 0.00 34.01 2.73
4389 5661 4.589374 AGCTGAAGTTGTTACTGGAGTACT 59.411 41.667 0.00 0.00 34.01 2.73
4390 5662 4.924462 GCTGAAGTTGTTACTGGAGTACTC 59.076 45.833 14.87 14.87 34.01 2.59
4399 5671 4.256462 GGAGTACTCCCTCCGTCC 57.744 66.667 28.87 4.17 43.94 4.79
4400 5672 1.823041 GGAGTACTCCCTCCGTCCG 60.823 68.421 28.87 0.00 43.94 4.79
4403 5675 1.377725 GTACTCCCTCCGTCCGTGA 60.378 63.158 0.00 0.00 0.00 4.35
4405 5677 0.033796 TACTCCCTCCGTCCGTGAAT 60.034 55.000 0.00 0.00 0.00 2.57
4406 5678 0.033796 ACTCCCTCCGTCCGTGAATA 60.034 55.000 0.00 0.00 0.00 1.75
4408 5680 1.067212 CTCCCTCCGTCCGTGAATAAG 59.933 57.143 0.00 0.00 0.00 1.73
4413 5685 3.432782 CTCCGTCCGTGAATAAGTGTAC 58.567 50.000 0.00 0.00 0.00 2.90
4414 5686 3.084039 TCCGTCCGTGAATAAGTGTACT 58.916 45.455 0.00 0.00 0.00 2.73
4415 5687 3.507233 TCCGTCCGTGAATAAGTGTACTT 59.493 43.478 2.51 2.51 39.85 2.24
4416 5688 3.855950 CCGTCCGTGAATAAGTGTACTTC 59.144 47.826 0.00 0.00 37.40 3.01
4417 5689 4.380233 CCGTCCGTGAATAAGTGTACTTCT 60.380 45.833 0.00 0.00 37.40 2.85
4418 5690 5.163723 CCGTCCGTGAATAAGTGTACTTCTA 60.164 44.000 0.00 0.00 37.40 2.10
4419 5691 6.459298 CCGTCCGTGAATAAGTGTACTTCTAT 60.459 42.308 0.00 0.00 37.40 1.98
4420 5692 6.632035 CGTCCGTGAATAAGTGTACTTCTATC 59.368 42.308 0.00 0.03 37.40 2.08
4421 5693 7.478322 GTCCGTGAATAAGTGTACTTCTATCA 58.522 38.462 0.00 2.46 37.40 2.15
4422 5694 8.136165 GTCCGTGAATAAGTGTACTTCTATCAT 58.864 37.037 0.00 0.00 37.40 2.45
4423 5695 8.692710 TCCGTGAATAAGTGTACTTCTATCATT 58.307 33.333 0.00 0.00 37.40 2.57
4424 5696 9.314321 CCGTGAATAAGTGTACTTCTATCATTT 57.686 33.333 0.00 0.00 37.40 2.32
4432 5704 9.593134 AAGTGTACTTCTATCATTTCTGCTAAG 57.407 33.333 0.00 0.00 0.00 2.18
4433 5705 8.754080 AGTGTACTTCTATCATTTCTGCTAAGT 58.246 33.333 0.00 0.00 0.00 2.24
4434 5706 9.026074 GTGTACTTCTATCATTTCTGCTAAGTC 57.974 37.037 0.00 0.00 0.00 3.01
4435 5707 8.749354 TGTACTTCTATCATTTCTGCTAAGTCA 58.251 33.333 0.00 0.00 0.00 3.41
4436 5708 9.587772 GTACTTCTATCATTTCTGCTAAGTCAA 57.412 33.333 0.00 0.00 0.00 3.18
4438 5710 9.160496 ACTTCTATCATTTCTGCTAAGTCAAAG 57.840 33.333 0.00 0.00 0.00 2.77
4439 5711 9.160496 CTTCTATCATTTCTGCTAAGTCAAAGT 57.840 33.333 0.00 0.00 0.00 2.66
4440 5712 9.507329 TTCTATCATTTCTGCTAAGTCAAAGTT 57.493 29.630 0.00 0.00 0.00 2.66
4441 5713 9.507329 TCTATCATTTCTGCTAAGTCAAAGTTT 57.493 29.630 0.00 0.00 0.00 2.66
4472 5744 8.575649 TTCTGACCAACTTTTTAGAAAAGAGT 57.424 30.769 17.31 11.81 0.00 3.24
4473 5745 9.675464 TTCTGACCAACTTTTTAGAAAAGAGTA 57.325 29.630 17.31 0.00 0.00 2.59
4474 5746 9.326413 TCTGACCAACTTTTTAGAAAAGAGTAG 57.674 33.333 17.31 7.52 0.00 2.57
4475 5747 9.110502 CTGACCAACTTTTTAGAAAAGAGTAGT 57.889 33.333 17.31 9.91 0.00 2.73
4532 5804 8.816640 AAAATGCATTTCAAAACGAATCTAGT 57.183 26.923 24.28 0.75 32.32 2.57
4533 5805 7.801547 AATGCATTTCAAAACGAATCTAGTG 57.198 32.000 5.99 0.00 32.32 2.74
4534 5806 6.552859 TGCATTTCAAAACGAATCTAGTGA 57.447 33.333 0.00 0.00 32.32 3.41
4535 5807 7.144722 TGCATTTCAAAACGAATCTAGTGAT 57.855 32.000 0.00 0.00 32.32 3.06
4536 5808 8.262715 TGCATTTCAAAACGAATCTAGTGATA 57.737 30.769 0.00 0.00 32.32 2.15
4537 5809 8.175069 TGCATTTCAAAACGAATCTAGTGATAC 58.825 33.333 0.00 0.00 32.32 2.24
4538 5810 8.391106 GCATTTCAAAACGAATCTAGTGATACT 58.609 33.333 0.00 0.00 32.32 2.12
4548 5820 9.680315 ACGAATCTAGTGATACTAATTTAGTGC 57.320 33.333 17.47 10.62 39.81 4.40
4549 5821 9.130312 CGAATCTAGTGATACTAATTTAGTGCC 57.870 37.037 17.47 10.11 39.81 5.01
4550 5822 9.982651 GAATCTAGTGATACTAATTTAGTGCCA 57.017 33.333 17.47 12.17 39.81 4.92
4557 5829 9.612620 GTGATACTAATTTAGTGCCATAAATGC 57.387 33.333 17.47 1.68 39.81 3.56
4558 5830 9.573166 TGATACTAATTTAGTGCCATAAATGCT 57.427 29.630 17.47 0.00 39.81 3.79
4559 5831 9.831737 GATACTAATTTAGTGCCATAAATGCTG 57.168 33.333 17.47 2.27 39.81 4.41
4560 5832 6.507023 ACTAATTTAGTGCCATAAATGCTGC 58.493 36.000 8.27 0.00 37.69 5.25
4561 5833 5.603170 AATTTAGTGCCATAAATGCTGCT 57.397 34.783 0.00 0.00 35.91 4.24
4562 5834 6.713762 AATTTAGTGCCATAAATGCTGCTA 57.286 33.333 0.00 0.00 35.91 3.49
4563 5835 6.906157 ATTTAGTGCCATAAATGCTGCTAT 57.094 33.333 0.00 0.00 34.76 2.97
4564 5836 6.713762 TTTAGTGCCATAAATGCTGCTATT 57.286 33.333 0.00 0.00 0.00 1.73
4565 5837 6.713762 TTAGTGCCATAAATGCTGCTATTT 57.286 33.333 0.00 8.04 34.78 1.40
4566 5838 5.603170 AGTGCCATAAATGCTGCTATTTT 57.397 34.783 12.76 7.76 32.79 1.82
4567 5839 5.981174 AGTGCCATAAATGCTGCTATTTTT 58.019 33.333 12.76 5.83 32.79 1.94
4617 5889 9.788960 AAAACTTTGACTTAAGACAAAAGCTAG 57.211 29.630 25.68 18.71 38.68 3.42
4618 5890 8.732746 AACTTTGACTTAAGACAAAAGCTAGA 57.267 30.769 25.68 9.24 38.68 2.43
4619 5891 8.910351 ACTTTGACTTAAGACAAAAGCTAGAT 57.090 30.769 25.68 9.44 38.68 1.98
4620 5892 8.778358 ACTTTGACTTAAGACAAAAGCTAGATG 58.222 33.333 25.68 16.98 38.68 2.90
4621 5893 8.677148 TTTGACTTAAGACAAAAGCTAGATGT 57.323 30.769 24.34 0.00 36.92 3.06
4622 5894 9.772973 TTTGACTTAAGACAAAAGCTAGATGTA 57.227 29.630 24.34 4.07 36.92 2.29
4623 5895 8.758633 TGACTTAAGACAAAAGCTAGATGTAC 57.241 34.615 10.09 0.00 0.00 2.90
4624 5896 8.364894 TGACTTAAGACAAAAGCTAGATGTACA 58.635 33.333 10.09 0.00 0.00 2.90
4625 5897 8.535690 ACTTAAGACAAAAGCTAGATGTACAC 57.464 34.615 10.09 0.00 0.00 2.90
4626 5898 8.368668 ACTTAAGACAAAAGCTAGATGTACACT 58.631 33.333 10.09 0.13 0.00 3.55
4627 5899 9.209175 CTTAAGACAAAAGCTAGATGTACACTT 57.791 33.333 0.00 0.00 0.00 3.16
4628 5900 7.426929 AAGACAAAAGCTAGATGTACACTTG 57.573 36.000 0.00 0.31 0.00 3.16
4629 5901 6.525629 AGACAAAAGCTAGATGTACACTTGT 58.474 36.000 0.00 0.00 0.00 3.16
4630 5902 6.992715 AGACAAAAGCTAGATGTACACTTGTT 59.007 34.615 0.00 0.00 0.00 2.83
4631 5903 7.171678 AGACAAAAGCTAGATGTACACTTGTTC 59.828 37.037 0.00 0.00 0.00 3.18
4632 5904 6.073765 ACAAAAGCTAGATGTACACTTGTTCG 60.074 38.462 0.00 0.00 0.00 3.95
4633 5905 3.512680 AGCTAGATGTACACTTGTTCGC 58.487 45.455 0.00 0.00 0.00 4.70
4634 5906 2.279136 GCTAGATGTACACTTGTTCGCG 59.721 50.000 0.00 0.00 0.00 5.87
4635 5907 1.710013 AGATGTACACTTGTTCGCGG 58.290 50.000 6.13 0.00 0.00 6.46
4636 5908 1.271379 AGATGTACACTTGTTCGCGGA 59.729 47.619 6.13 0.00 0.00 5.54
4637 5909 1.389106 GATGTACACTTGTTCGCGGAC 59.611 52.381 11.62 11.62 0.00 4.79
4638 5910 0.935831 TGTACACTTGTTCGCGGACG 60.936 55.000 13.91 1.42 42.01 4.79
4639 5911 1.372004 TACACTTGTTCGCGGACGG 60.372 57.895 13.91 10.83 40.63 4.79
4640 5912 1.794151 TACACTTGTTCGCGGACGGA 61.794 55.000 13.91 2.91 40.63 4.69
4641 5913 2.049433 ACTTGTTCGCGGACGGAG 60.049 61.111 13.91 15.46 40.63 4.63
4642 5914 2.809601 CTTGTTCGCGGACGGAGG 60.810 66.667 13.91 0.00 40.63 4.30
4643 5915 4.367023 TTGTTCGCGGACGGAGGG 62.367 66.667 13.91 0.00 40.63 4.30
4645 5917 4.493747 GTTCGCGGACGGAGGGAG 62.494 72.222 6.13 0.00 40.63 4.30
4647 5919 3.626996 TTCGCGGACGGAGGGAGTA 62.627 63.158 6.13 0.00 40.63 2.59
4648 5920 2.898920 TTCGCGGACGGAGGGAGTAT 62.899 60.000 6.13 0.00 40.63 2.12
4649 5921 2.487532 CGCGGACGGAGGGAGTATT 61.488 63.158 0.00 0.00 34.97 1.89
4650 5922 1.821258 GCGGACGGAGGGAGTATTT 59.179 57.895 0.00 0.00 0.00 1.40
4651 5923 0.529992 GCGGACGGAGGGAGTATTTG 60.530 60.000 0.00 0.00 0.00 2.32
4697 5971 5.235850 TCTTGCTTGTGGAATTGGTAGTA 57.764 39.130 0.00 0.00 0.00 1.82
4740 6014 4.707030 TGCTTCAGGATTGCAAATAGTG 57.293 40.909 1.71 0.00 33.48 2.74
4744 6018 5.675575 GCTTCAGGATTGCAAATAGTGAGTG 60.676 44.000 1.71 3.37 0.00 3.51
4759 6033 0.905357 GAGTGGTGGGTGCTCTGTAT 59.095 55.000 0.00 0.00 0.00 2.29
4760 6034 2.108168 GAGTGGTGGGTGCTCTGTATA 58.892 52.381 0.00 0.00 0.00 1.47
4777 6051 6.500336 TCTGTATACCTGTAAAGAAGAGGGT 58.500 40.000 0.00 0.00 43.17 4.34
4778 6052 6.380274 TCTGTATACCTGTAAAGAAGAGGGTG 59.620 42.308 0.00 0.00 43.17 4.61
4779 6053 6.258354 TGTATACCTGTAAAGAAGAGGGTGA 58.742 40.000 0.00 0.00 43.17 4.02
4780 6054 5.678955 ATACCTGTAAAGAAGAGGGTGAC 57.321 43.478 0.00 0.00 43.17 3.67
4791 6065 2.987547 GGGTGACCGTCCGTGAGA 60.988 66.667 0.00 0.00 43.64 3.27
4792 6066 2.348888 GGGTGACCGTCCGTGAGAT 61.349 63.158 0.00 0.00 43.64 2.75
4793 6067 1.033746 GGGTGACCGTCCGTGAGATA 61.034 60.000 0.00 0.00 43.64 1.98
4794 6068 0.813184 GGTGACCGTCCGTGAGATAA 59.187 55.000 0.00 0.00 0.00 1.75
4795 6069 1.468736 GGTGACCGTCCGTGAGATAAC 60.469 57.143 0.00 0.00 0.00 1.89
4796 6070 1.471684 GTGACCGTCCGTGAGATAACT 59.528 52.381 0.00 0.00 0.00 2.24
4797 6071 1.471287 TGACCGTCCGTGAGATAACTG 59.529 52.381 0.00 0.00 0.00 3.16
4798 6072 1.471684 GACCGTCCGTGAGATAACTGT 59.528 52.381 0.00 0.00 0.00 3.55
4799 6073 1.471684 ACCGTCCGTGAGATAACTGTC 59.528 52.381 0.00 0.00 0.00 3.51
4800 6074 1.471287 CCGTCCGTGAGATAACTGTCA 59.529 52.381 0.00 0.00 0.00 3.58
4801 6075 2.478031 CCGTCCGTGAGATAACTGTCAG 60.478 54.545 0.00 0.00 0.00 3.51
4802 6076 2.531206 GTCCGTGAGATAACTGTCAGC 58.469 52.381 0.00 0.00 0.00 4.26
4803 6077 1.476891 TCCGTGAGATAACTGTCAGCC 59.523 52.381 0.00 0.00 0.00 4.85
4804 6078 1.550065 CGTGAGATAACTGTCAGCCG 58.450 55.000 0.00 0.00 0.00 5.52
4805 6079 1.132453 CGTGAGATAACTGTCAGCCGA 59.868 52.381 0.00 0.00 0.00 5.54
4806 6080 2.792890 CGTGAGATAACTGTCAGCCGAG 60.793 54.545 0.00 0.00 0.00 4.63
4807 6081 2.164624 GTGAGATAACTGTCAGCCGAGT 59.835 50.000 0.00 0.00 0.00 4.18
4808 6082 2.164422 TGAGATAACTGTCAGCCGAGTG 59.836 50.000 0.00 0.00 0.00 3.51
4837 6111 7.265673 TGCACTACAGTTCTCATAATTCTACC 58.734 38.462 0.00 0.00 0.00 3.18
4842 6116 9.838339 CTACAGTTCTCATAATTCTACCCAAAT 57.162 33.333 0.00 0.00 0.00 2.32
4849 6123 9.699410 TCTCATAATTCTACCCAAATTTCATGT 57.301 29.630 0.00 0.00 0.00 3.21
4874 6148 3.993920 ACCAATTTCAAGCATGAACCAC 58.006 40.909 3.39 0.00 45.01 4.16
4877 6151 4.320861 CCAATTTCAAGCATGAACCACGTA 60.321 41.667 3.39 0.00 45.01 3.57
4878 6152 3.889196 TTTCAAGCATGAACCACGTAC 57.111 42.857 3.39 0.00 45.01 3.67
4879 6153 2.535012 TCAAGCATGAACCACGTACA 57.465 45.000 0.00 0.00 30.99 2.90
4880 6154 2.412870 TCAAGCATGAACCACGTACAG 58.587 47.619 0.00 0.00 30.99 2.74
4881 6155 2.036604 TCAAGCATGAACCACGTACAGA 59.963 45.455 0.00 0.00 30.99 3.41
4883 6157 2.413837 AGCATGAACCACGTACAGAAC 58.586 47.619 0.00 0.00 0.00 3.01
4884 6158 2.037251 AGCATGAACCACGTACAGAACT 59.963 45.455 0.00 0.00 0.00 3.01
4885 6159 2.157668 GCATGAACCACGTACAGAACTG 59.842 50.000 0.00 0.00 0.00 3.16
4886 6160 3.390135 CATGAACCACGTACAGAACTGT 58.610 45.455 12.10 12.10 46.87 3.55
4887 6161 3.530265 TGAACCACGTACAGAACTGTT 57.470 42.857 12.66 0.00 41.83 3.16
4888 6162 3.450578 TGAACCACGTACAGAACTGTTC 58.549 45.455 12.54 12.54 41.83 3.18
4889 6163 3.131577 TGAACCACGTACAGAACTGTTCT 59.868 43.478 17.00 17.00 41.83 3.01
4897 6171 3.421567 AGAACTGTTCTGTTGGCCC 57.578 52.632 21.47 0.00 38.91 5.80
4898 6172 0.550914 AGAACTGTTCTGTTGGCCCA 59.449 50.000 21.47 0.00 38.91 5.36
4899 6173 0.954452 GAACTGTTCTGTTGGCCCAG 59.046 55.000 13.13 0.41 0.00 4.45
4900 6174 0.258774 AACTGTTCTGTTGGCCCAGT 59.741 50.000 0.00 0.69 37.96 4.00
4901 6175 0.466189 ACTGTTCTGTTGGCCCAGTG 60.466 55.000 7.65 1.72 35.20 3.66
4902 6176 0.466189 CTGTTCTGTTGGCCCAGTGT 60.466 55.000 0.00 0.00 34.02 3.55
4903 6177 0.840617 TGTTCTGTTGGCCCAGTGTA 59.159 50.000 0.00 0.00 34.02 2.90
4904 6178 1.213182 TGTTCTGTTGGCCCAGTGTAA 59.787 47.619 0.00 0.00 34.02 2.41
4905 6179 2.158534 TGTTCTGTTGGCCCAGTGTAAT 60.159 45.455 0.00 0.00 34.02 1.89
4906 6180 2.890945 GTTCTGTTGGCCCAGTGTAATT 59.109 45.455 0.00 0.00 34.02 1.40
4907 6181 2.790433 TCTGTTGGCCCAGTGTAATTC 58.210 47.619 0.00 0.00 34.02 2.17
4908 6182 2.107378 TCTGTTGGCCCAGTGTAATTCA 59.893 45.455 0.00 0.00 34.02 2.57
4909 6183 2.228822 CTGTTGGCCCAGTGTAATTCAC 59.771 50.000 0.00 0.00 46.46 3.18
4922 6196 6.158175 GTGTAATTCACAGCTCTTACAGTG 57.842 41.667 0.00 0.00 45.51 3.66
4923 6197 5.926542 GTGTAATTCACAGCTCTTACAGTGA 59.073 40.000 0.00 0.00 45.51 3.41
4926 6200 3.386768 TCACAGCTCTTACAGTGAACC 57.613 47.619 0.00 0.00 37.99 3.62
4927 6201 2.698274 TCACAGCTCTTACAGTGAACCA 59.302 45.455 0.00 0.00 37.99 3.67
4928 6202 3.324846 TCACAGCTCTTACAGTGAACCAT 59.675 43.478 0.00 0.00 37.99 3.55
4929 6203 3.434641 CACAGCTCTTACAGTGAACCATG 59.565 47.826 0.00 0.00 33.99 3.66
4930 6204 2.417933 CAGCTCTTACAGTGAACCATGC 59.582 50.000 0.00 0.00 0.00 4.06
4931 6205 2.304180 AGCTCTTACAGTGAACCATGCT 59.696 45.455 0.00 0.00 0.00 3.79
4932 6206 2.417933 GCTCTTACAGTGAACCATGCTG 59.582 50.000 0.00 0.00 36.41 4.41
4933 6207 3.668447 CTCTTACAGTGAACCATGCTGT 58.332 45.455 0.00 7.85 44.49 4.40
4934 6208 3.402110 TCTTACAGTGAACCATGCTGTG 58.598 45.455 11.75 0.00 42.60 3.66
4935 6209 1.522668 TACAGTGAACCATGCTGTGC 58.477 50.000 11.75 0.00 42.60 4.57
4936 6210 0.466007 ACAGTGAACCATGCTGTGCA 60.466 50.000 0.00 0.00 44.86 4.57
4937 6211 0.669619 CAGTGAACCATGCTGTGCAA 59.330 50.000 0.00 0.00 43.62 4.08
4938 6212 1.067364 CAGTGAACCATGCTGTGCAAA 59.933 47.619 0.00 0.00 43.62 3.68
4939 6213 1.338973 AGTGAACCATGCTGTGCAAAG 59.661 47.619 0.00 0.00 43.62 2.77
4940 6214 1.337703 GTGAACCATGCTGTGCAAAGA 59.662 47.619 8.49 0.00 43.62 2.52
4941 6215 1.337703 TGAACCATGCTGTGCAAAGAC 59.662 47.619 8.49 0.00 43.62 3.01
4942 6216 0.675633 AACCATGCTGTGCAAAGACC 59.324 50.000 8.49 0.00 43.62 3.85
4943 6217 1.181098 ACCATGCTGTGCAAAGACCC 61.181 55.000 8.49 0.00 43.62 4.46
4944 6218 1.180456 CCATGCTGTGCAAAGACCCA 61.180 55.000 8.49 0.00 43.62 4.51
4945 6219 0.675083 CATGCTGTGCAAAGACCCAA 59.325 50.000 8.49 0.00 43.62 4.12
4946 6220 1.068895 CATGCTGTGCAAAGACCCAAA 59.931 47.619 8.49 0.00 43.62 3.28
4947 6221 0.459489 TGCTGTGCAAAGACCCAAAC 59.541 50.000 8.49 0.00 34.76 2.93
4948 6222 0.459489 GCTGTGCAAAGACCCAAACA 59.541 50.000 8.49 0.00 0.00 2.83
4949 6223 1.134848 GCTGTGCAAAGACCCAAACAA 60.135 47.619 8.49 0.00 0.00 2.83
4950 6224 2.676463 GCTGTGCAAAGACCCAAACAAA 60.676 45.455 8.49 0.00 0.00 2.83
4951 6225 3.189285 CTGTGCAAAGACCCAAACAAAG 58.811 45.455 0.00 0.00 0.00 2.77
4952 6226 1.933181 GTGCAAAGACCCAAACAAAGC 59.067 47.619 0.00 0.00 0.00 3.51
4953 6227 1.830477 TGCAAAGACCCAAACAAAGCT 59.170 42.857 0.00 0.00 0.00 3.74
4954 6228 2.235898 TGCAAAGACCCAAACAAAGCTT 59.764 40.909 0.00 0.00 0.00 3.74
4955 6229 3.449018 TGCAAAGACCCAAACAAAGCTTA 59.551 39.130 0.00 0.00 0.00 3.09
4956 6230 4.100808 TGCAAAGACCCAAACAAAGCTTAT 59.899 37.500 0.00 0.00 0.00 1.73
4957 6231 5.056480 GCAAAGACCCAAACAAAGCTTATT 58.944 37.500 0.00 0.00 0.00 1.40
4958 6232 5.177511 GCAAAGACCCAAACAAAGCTTATTC 59.822 40.000 0.00 0.00 0.00 1.75
4962 6236 5.010012 AGACCCAAACAAAGCTTATTCACAG 59.990 40.000 0.00 0.00 0.00 3.66
4964 6238 5.539955 ACCCAAACAAAGCTTATTCACAGAT 59.460 36.000 0.00 0.00 0.00 2.90
4988 6262 7.504924 TGGAACAATAACACTTAACTGAAGG 57.495 36.000 0.00 0.00 35.43 3.46
4990 6264 6.016610 GGAACAATAACACTTAACTGAAGGCA 60.017 38.462 0.00 0.00 39.74 4.75
5073 6439 4.870123 AAAATTGGTGTATGCTGCTTGA 57.130 36.364 0.00 0.00 0.00 3.02
5168 6534 0.975556 TCTCTAATGCTGGCACCGGA 60.976 55.000 9.46 0.00 0.00 5.14
5182 6548 2.034179 GCACCGGAAGCTGTTTTAAAGT 59.966 45.455 9.46 0.00 0.00 2.66
5233 6599 2.570302 AGCGGTGTGGGACTAAATAAGT 59.430 45.455 0.00 0.00 42.80 2.24
5253 6619 2.391616 TGAAATGCAGTCGCTGAGAT 57.608 45.000 10.46 0.09 39.64 2.75
5254 6620 2.004733 TGAAATGCAGTCGCTGAGATG 58.995 47.619 10.46 0.00 39.64 2.90
5255 6621 2.005451 GAAATGCAGTCGCTGAGATGT 58.995 47.619 10.46 0.00 39.64 3.06
5257 6623 2.215907 ATGCAGTCGCTGAGATGTAC 57.784 50.000 10.46 0.00 39.64 2.90
5258 6624 1.177401 TGCAGTCGCTGAGATGTACT 58.823 50.000 10.46 0.00 39.64 2.73
5259 6625 2.365582 TGCAGTCGCTGAGATGTACTA 58.634 47.619 10.46 0.00 39.64 1.82
5260 6626 2.356069 TGCAGTCGCTGAGATGTACTAG 59.644 50.000 10.46 0.00 39.64 2.57
5261 6627 2.856720 GCAGTCGCTGAGATGTACTAGC 60.857 54.545 10.46 0.00 32.44 3.42
5262 6628 1.950909 AGTCGCTGAGATGTACTAGCC 59.049 52.381 0.00 0.00 32.70 3.93
5263 6629 1.950909 GTCGCTGAGATGTACTAGCCT 59.049 52.381 0.00 0.00 32.70 4.58
5264 6630 1.950216 TCGCTGAGATGTACTAGCCTG 59.050 52.381 0.00 0.00 32.70 4.85
5265 6631 1.000827 CGCTGAGATGTACTAGCCTGG 60.001 57.143 0.00 0.00 32.70 4.45
5266 6632 2.311463 GCTGAGATGTACTAGCCTGGA 58.689 52.381 0.00 0.00 0.00 3.86
5267 6633 2.035321 GCTGAGATGTACTAGCCTGGAC 59.965 54.545 0.00 0.00 0.00 4.02
5324 6690 3.198872 GGGCCTAAATCACTCTTCTTCG 58.801 50.000 0.84 0.00 0.00 3.79
5345 6711 1.402896 TTTTGCAATCAACCGGGCCA 61.403 50.000 6.32 0.00 30.75 5.36
5348 6714 1.079888 GCAATCAACCGGGCCAAAG 60.080 57.895 6.32 0.00 0.00 2.77
5349 6715 1.531739 GCAATCAACCGGGCCAAAGA 61.532 55.000 6.32 0.00 0.00 2.52
5350 6716 0.527565 CAATCAACCGGGCCAAAGAG 59.472 55.000 6.32 0.00 0.00 2.85
5351 6717 0.112412 AATCAACCGGGCCAAAGAGT 59.888 50.000 6.32 0.00 0.00 3.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
44 45 9.547753 AGTCCAAATAGTGCTAAATACTGTATG 57.452 33.333 0.22 0.00 0.00 2.39
186 188 6.944234 ATAAAAGAAAGGCACCATAGCTAC 57.056 37.500 0.00 0.00 34.17 3.58
274 276 3.872771 TGGTCCTTGTTTCGTGTACTTTC 59.127 43.478 0.00 0.00 0.00 2.62
303 411 5.297776 CCTTGTTGAACTGTTGTGAGATTCT 59.702 40.000 0.00 0.00 0.00 2.40
405 513 5.726793 ACACCCATTCTAGGAAGTTGTCTAT 59.273 40.000 0.00 0.00 0.00 1.98
411 519 5.091552 TGACTACACCCATTCTAGGAAGTT 58.908 41.667 0.00 0.00 0.00 2.66
416 524 6.316390 GTGATTTTGACTACACCCATTCTAGG 59.684 42.308 0.00 0.00 0.00 3.02
588 1129 3.513662 TCGTCGTCTTCAACAACTTTGA 58.486 40.909 0.00 0.00 0.00 2.69
644 1187 3.395639 GTCGTCATTGTGGAACCAACTA 58.604 45.455 0.00 0.00 34.36 2.24
662 1205 4.980590 TGCAAATTAATGTAGCTTGGTCG 58.019 39.130 0.00 0.00 0.00 4.79
665 1208 6.339730 TGGATTGCAAATTAATGTAGCTTGG 58.660 36.000 1.71 0.00 0.00 3.61
672 1215 7.711772 CCACATGTATGGATTGCAAATTAATGT 59.288 33.333 1.71 5.05 43.02 2.71
1022 1565 1.271054 GCAGGAACAGAAGAAGGAGCA 60.271 52.381 0.00 0.00 0.00 4.26
1063 1606 3.054065 AGAAATAAACCTGCTCCTCCCTG 60.054 47.826 0.00 0.00 0.00 4.45
1064 1607 3.193782 AGAAATAAACCTGCTCCTCCCT 58.806 45.455 0.00 0.00 0.00 4.20
1065 1608 3.201045 AGAGAAATAAACCTGCTCCTCCC 59.799 47.826 0.00 0.00 0.00 4.30
1081 1624 4.402155 TCCAAAGCTCAAGCAAAAGAGAAA 59.598 37.500 4.59 0.00 45.16 2.52
1094 1637 2.373169 ACTGTGAGGAATCCAAAGCTCA 59.627 45.455 0.61 0.00 0.00 4.26
1112 1655 1.851304 ATGCATACCCCCAACAACTG 58.149 50.000 0.00 0.00 0.00 3.16
1122 1665 1.336755 CGTAAGCCCAAATGCATACCC 59.663 52.381 0.00 0.00 33.14 3.69
1172 1715 1.254284 ACTCCTCAGCTCCAACTCCG 61.254 60.000 0.00 0.00 0.00 4.63
1229 1772 2.777832 ACCAGTTCCAGAATCTGAGC 57.222 50.000 12.53 1.41 32.44 4.26
1261 1804 0.899717 TCCATTTCCTGCAAGCACCC 60.900 55.000 0.00 0.00 0.00 4.61
1287 1830 5.122239 TCACAAACTCTGGATAGCAAAATCG 59.878 40.000 0.00 0.00 0.00 3.34
1332 1881 5.600898 AGGCCAACACTAAAAACACCTATTT 59.399 36.000 5.01 0.00 0.00 1.40
1369 1922 6.821388 ACTGGTAAATTTGTGGCATTTGTTA 58.179 32.000 0.00 0.00 0.00 2.41
1389 1942 4.121317 GAGCTCAAGAGATGATGAACTGG 58.879 47.826 9.40 0.00 37.44 4.00
1490 2061 2.640826 TCCAATAAACCGGACTTCCAGT 59.359 45.455 9.46 0.00 35.14 4.00
1496 2067 7.571025 ACAATAGTAATCCAATAAACCGGACT 58.429 34.615 9.46 0.00 33.05 3.85
1543 2114 3.787001 CAGAGGCCGGGGGAAGTC 61.787 72.222 2.18 0.00 0.00 3.01
1551 2122 3.680620 TTTCCGATGCAGAGGCCGG 62.681 63.158 0.00 0.00 43.53 6.13
1552 2123 2.125147 TTTCCGATGCAGAGGCCG 60.125 61.111 0.00 0.00 40.13 6.13
1553 2124 0.179034 ATCTTTCCGATGCAGAGGCC 60.179 55.000 0.00 0.00 40.13 5.19
1554 2125 0.942962 CATCTTTCCGATGCAGAGGC 59.057 55.000 5.43 0.00 42.75 4.70
1562 2133 1.789078 GCCGCATGCATCTTTCCGAT 61.789 55.000 19.57 0.00 40.77 4.18
1563 2134 2.472059 GCCGCATGCATCTTTCCGA 61.472 57.895 19.57 0.00 40.77 4.55
1564 2135 2.025156 GCCGCATGCATCTTTCCG 59.975 61.111 19.57 0.00 40.77 4.30
1565 2136 2.414594 GGCCGCATGCATCTTTCC 59.585 61.111 19.57 4.90 43.89 3.13
1566 2137 1.226773 GTGGCCGCATGCATCTTTC 60.227 57.895 19.57 1.17 43.89 2.62
1567 2138 1.252904 AAGTGGCCGCATGCATCTTT 61.253 50.000 20.59 0.00 43.89 2.52
1568 2139 1.252904 AAAGTGGCCGCATGCATCTT 61.253 50.000 20.59 10.65 43.89 2.40
1569 2140 0.394216 TAAAGTGGCCGCATGCATCT 60.394 50.000 20.59 4.97 43.89 2.90
1570 2141 0.670162 ATAAAGTGGCCGCATGCATC 59.330 50.000 20.59 8.10 43.89 3.91
1571 2142 1.113788 AATAAAGTGGCCGCATGCAT 58.886 45.000 20.59 0.00 43.89 3.96
1572 2143 1.756430 TAATAAAGTGGCCGCATGCA 58.244 45.000 20.59 0.22 43.89 3.96
1573 2144 2.861462 TTAATAAAGTGGCCGCATGC 57.139 45.000 20.59 7.91 40.16 4.06
1574 2145 4.489810 TGTTTTAATAAAGTGGCCGCATG 58.510 39.130 20.59 0.00 0.00 4.06
1575 2146 4.792521 TGTTTTAATAAAGTGGCCGCAT 57.207 36.364 20.59 2.72 0.00 4.73
1576 2147 4.038162 ACTTGTTTTAATAAAGTGGCCGCA 59.962 37.500 20.59 0.00 33.01 5.69
1577 2148 4.552355 ACTTGTTTTAATAAAGTGGCCGC 58.448 39.130 8.71 8.71 33.01 6.53
1578 2149 6.210078 TGAACTTGTTTTAATAAAGTGGCCG 58.790 36.000 0.00 0.00 34.46 6.13
1579 2150 6.145534 GCTGAACTTGTTTTAATAAAGTGGCC 59.854 38.462 0.00 0.00 34.46 5.36
1580 2151 6.699642 TGCTGAACTTGTTTTAATAAAGTGGC 59.300 34.615 0.00 0.00 34.46 5.01
1581 2152 8.641499 TTGCTGAACTTGTTTTAATAAAGTGG 57.359 30.769 0.00 0.00 34.46 4.00
1588 2159 8.998377 ACTTGTTTTTGCTGAACTTGTTTTAAT 58.002 25.926 0.00 0.00 0.00 1.40
1589 2160 8.371770 ACTTGTTTTTGCTGAACTTGTTTTAA 57.628 26.923 0.00 0.00 0.00 1.52
1590 2161 7.954788 ACTTGTTTTTGCTGAACTTGTTTTA 57.045 28.000 0.00 0.00 0.00 1.52
1591 2162 6.859420 ACTTGTTTTTGCTGAACTTGTTTT 57.141 29.167 0.00 0.00 0.00 2.43
1592 2163 6.481644 TGAACTTGTTTTTGCTGAACTTGTTT 59.518 30.769 0.00 0.00 0.00 2.83
1593 2164 5.988561 TGAACTTGTTTTTGCTGAACTTGTT 59.011 32.000 0.00 0.00 0.00 2.83
1594 2165 5.537188 TGAACTTGTTTTTGCTGAACTTGT 58.463 33.333 0.00 0.00 0.00 3.16
1595 2166 6.532657 AGATGAACTTGTTTTTGCTGAACTTG 59.467 34.615 0.00 0.00 0.00 3.16
1596 2167 6.633856 AGATGAACTTGTTTTTGCTGAACTT 58.366 32.000 0.00 0.00 0.00 2.66
1597 2168 6.096001 AGAGATGAACTTGTTTTTGCTGAACT 59.904 34.615 0.00 0.00 0.00 3.01
1598 2169 6.268566 AGAGATGAACTTGTTTTTGCTGAAC 58.731 36.000 0.00 0.00 0.00 3.18
1599 2170 6.455360 AGAGATGAACTTGTTTTTGCTGAA 57.545 33.333 0.00 0.00 0.00 3.02
1600 2171 6.095300 TCAAGAGATGAACTTGTTTTTGCTGA 59.905 34.615 0.00 0.00 43.30 4.26
1601 2172 6.267817 TCAAGAGATGAACTTGTTTTTGCTG 58.732 36.000 0.00 0.00 43.30 4.41
1602 2173 6.455360 TCAAGAGATGAACTTGTTTTTGCT 57.545 33.333 0.00 0.00 43.30 3.91
1603 2174 5.174579 GCTCAAGAGATGAACTTGTTTTTGC 59.825 40.000 0.32 0.00 43.30 3.68
1604 2175 6.501781 AGCTCAAGAGATGAACTTGTTTTTG 58.498 36.000 0.32 0.00 43.30 2.44
1605 2176 6.545298 AGAGCTCAAGAGATGAACTTGTTTTT 59.455 34.615 17.77 0.00 43.30 1.94
1606 2177 6.017275 CAGAGCTCAAGAGATGAACTTGTTTT 60.017 38.462 17.77 0.00 43.30 2.43
1607 2178 5.469421 CAGAGCTCAAGAGATGAACTTGTTT 59.531 40.000 17.77 0.00 43.30 2.83
1608 2179 4.996122 CAGAGCTCAAGAGATGAACTTGTT 59.004 41.667 17.77 0.00 43.30 2.83
1609 2180 4.282957 TCAGAGCTCAAGAGATGAACTTGT 59.717 41.667 17.77 0.00 43.30 3.16
1610 2181 4.818642 TCAGAGCTCAAGAGATGAACTTG 58.181 43.478 17.77 0.16 43.92 3.16
1611 2182 5.011943 AGTTCAGAGCTCAAGAGATGAACTT 59.988 40.000 27.95 18.07 45.34 2.66
1612 2183 4.527816 AGTTCAGAGCTCAAGAGATGAACT 59.472 41.667 27.95 27.95 44.26 3.01
1613 2184 4.626604 CAGTTCAGAGCTCAAGAGATGAAC 59.373 45.833 25.44 25.44 42.13 3.18
1614 2185 4.525874 TCAGTTCAGAGCTCAAGAGATGAA 59.474 41.667 17.77 12.76 37.67 2.57
1615 2186 4.085009 TCAGTTCAGAGCTCAAGAGATGA 58.915 43.478 17.77 16.13 36.38 2.92
1616 2187 4.453177 TCAGTTCAGAGCTCAAGAGATG 57.547 45.455 17.77 14.35 0.00 2.90
1617 2188 4.527816 AGTTCAGTTCAGAGCTCAAGAGAT 59.472 41.667 17.77 3.27 0.00 2.75
1618 2189 3.894427 AGTTCAGTTCAGAGCTCAAGAGA 59.106 43.478 17.77 5.29 0.00 3.10
1619 2190 4.255833 AGTTCAGTTCAGAGCTCAAGAG 57.744 45.455 17.77 2.74 0.00 2.85
1620 2191 4.679373 AAGTTCAGTTCAGAGCTCAAGA 57.321 40.909 17.77 10.72 0.00 3.02
1621 2192 5.747951 AAAAGTTCAGTTCAGAGCTCAAG 57.252 39.130 17.77 8.24 0.00 3.02
1622 2193 5.677091 GCAAAAAGTTCAGTTCAGAGCTCAA 60.677 40.000 17.77 0.00 0.00 3.02
1623 2194 4.201950 GCAAAAAGTTCAGTTCAGAGCTCA 60.202 41.667 17.77 0.00 0.00 4.26
1624 2195 4.036144 AGCAAAAAGTTCAGTTCAGAGCTC 59.964 41.667 5.27 5.27 0.00 4.09
1625 2196 3.950395 AGCAAAAAGTTCAGTTCAGAGCT 59.050 39.130 0.00 0.00 0.00 4.09
1626 2197 4.286101 GAGCAAAAAGTTCAGTTCAGAGC 58.714 43.478 0.00 0.00 0.00 4.09
1627 2198 4.553547 CGGAGCAAAAAGTTCAGTTCAGAG 60.554 45.833 0.00 0.00 0.00 3.35
1628 2199 3.312421 CGGAGCAAAAAGTTCAGTTCAGA 59.688 43.478 0.00 0.00 0.00 3.27
1629 2200 3.621794 CGGAGCAAAAAGTTCAGTTCAG 58.378 45.455 0.00 0.00 0.00 3.02
1630 2201 3.691049 CGGAGCAAAAAGTTCAGTTCA 57.309 42.857 0.00 0.00 0.00 3.18
1648 2219 2.712057 AAACATGCAAAGAGAAGCGG 57.288 45.000 0.00 0.00 0.00 5.52
1682 2253 1.251251 GCAGAACTTCACCCAGCAAT 58.749 50.000 0.00 0.00 0.00 3.56
1769 2397 2.789409 TCTCTGATCTCTCCGTGACA 57.211 50.000 0.00 0.00 0.00 3.58
2046 2674 9.284968 TGAAAGTCCAAGAAAAGGAATAGTTAG 57.715 33.333 0.00 0.00 36.80 2.34
2165 2793 2.854963 TGATATGAATGCTGAGGGTGC 58.145 47.619 0.00 0.00 0.00 5.01
2379 3007 0.777446 AAGGAAAGCAGCAACCCCTA 59.223 50.000 0.00 0.00 0.00 3.53
2524 3152 7.362662 ACAAACTGCTAGATACACAAATGTTG 58.637 34.615 0.00 0.00 40.48 3.33
2530 3158 6.521162 TCTGAACAAACTGCTAGATACACAA 58.479 36.000 0.00 0.00 0.00 3.33
2542 3170 5.007921 TGTGATGTGACATCTGAACAAACTG 59.992 40.000 24.31 0.00 0.00 3.16
2552 3180 7.615582 ACGATTAAATTGTGATGTGACATCT 57.384 32.000 24.31 7.46 0.00 2.90
2690 3318 4.261572 GCAACTGCAATTTCAACTCCACTA 60.262 41.667 0.00 0.00 41.59 2.74
3088 3718 9.613957 CATGATTTACACCGTTGTTAACAAATA 57.386 29.630 22.14 7.76 37.63 1.40
3200 3830 9.225682 ACTCCTAATTCATAAGGGAAACATAGA 57.774 33.333 0.00 0.00 33.40 1.98
3463 4098 6.528321 CAAATTCTGAGCCATATGAGGTAGA 58.472 40.000 3.65 0.25 0.00 2.59
3466 4101 3.887716 GCAAATTCTGAGCCATATGAGGT 59.112 43.478 3.65 0.00 0.00 3.85
3495 4130 6.560253 AGATACCAAATTATGCCGCTAAAG 57.440 37.500 0.00 0.00 0.00 1.85
3501 4136 7.812669 GGGAAATTAAGATACCAAATTATGCCG 59.187 37.037 0.00 0.00 0.00 5.69
3515 4150 7.928873 TCAGTTAAGACAGGGGAAATTAAGAT 58.071 34.615 0.00 0.00 0.00 2.40
3543 4539 4.033990 TGATTGAGTTTCGAGAGATCGG 57.966 45.455 0.00 0.00 41.60 4.18
3544 4540 5.518812 AGATGATTGAGTTTCGAGAGATCG 58.481 41.667 0.00 0.00 41.60 3.69
3557 4553 8.768957 TTCTGAACTAACAAGAGATGATTGAG 57.231 34.615 0.00 0.00 0.00 3.02
3565 4561 9.249053 ACTCATATCTTCTGAACTAACAAGAGA 57.751 33.333 0.00 0.00 0.00 3.10
3621 4617 0.743345 GGGGTTCGACCTCCATTTCG 60.743 60.000 0.00 0.00 38.64 3.46
3653 4652 8.035984 GGAGGGAGTAATAGATACAACTTATGC 58.964 40.741 0.00 0.00 36.94 3.14
3665 4664 1.854939 TGGGACGGAGGGAGTAATAGA 59.145 52.381 0.00 0.00 0.00 1.98
3666 4665 2.376695 TGGGACGGAGGGAGTAATAG 57.623 55.000 0.00 0.00 0.00 1.73
3667 4666 4.474303 TTATGGGACGGAGGGAGTAATA 57.526 45.455 0.00 0.00 0.00 0.98
3669 4668 2.852714 TTATGGGACGGAGGGAGTAA 57.147 50.000 0.00 0.00 0.00 2.24
3670 4669 4.687262 ATATTATGGGACGGAGGGAGTA 57.313 45.455 0.00 0.00 0.00 2.59
3671 4670 3.562108 ATATTATGGGACGGAGGGAGT 57.438 47.619 0.00 0.00 0.00 3.85
3672 4671 5.127356 GTCTTATATTATGGGACGGAGGGAG 59.873 48.000 0.00 0.00 0.00 4.30
3673 4672 5.021458 GTCTTATATTATGGGACGGAGGGA 58.979 45.833 0.00 0.00 0.00 4.20
3674 4673 4.142227 CGTCTTATATTATGGGACGGAGGG 60.142 50.000 17.59 0.46 43.69 4.30
3675 4674 4.995124 CGTCTTATATTATGGGACGGAGG 58.005 47.826 17.59 0.00 43.69 4.30
3719 4928 6.376299 TGATACACCGACTGACTTATGTAGTT 59.624 38.462 0.00 0.00 37.17 2.24
3721 4930 6.373186 TGATACACCGACTGACTTATGTAG 57.627 41.667 0.00 0.00 0.00 2.74
3726 4935 5.654603 ATGTTGATACACCGACTGACTTA 57.345 39.130 0.00 0.00 37.03 2.24
4150 5422 4.467084 GCCGATGCTGGGGTCGAA 62.467 66.667 0.00 0.00 40.11 3.71
4383 5655 1.077858 ACGGACGGAGGGAGTACTC 60.078 63.158 14.87 14.87 36.76 2.59
4385 5657 0.962356 TTCACGGACGGAGGGAGTAC 60.962 60.000 0.00 0.00 0.00 2.73
4386 5658 0.033796 ATTCACGGACGGAGGGAGTA 60.034 55.000 0.00 0.00 0.00 2.59
4388 5660 1.067212 CTTATTCACGGACGGAGGGAG 59.933 57.143 0.00 0.00 0.00 4.30
4389 5661 1.108776 CTTATTCACGGACGGAGGGA 58.891 55.000 0.00 0.00 0.00 4.20
4390 5662 0.822164 ACTTATTCACGGACGGAGGG 59.178 55.000 0.00 0.00 0.00 4.30
4391 5663 1.203994 ACACTTATTCACGGACGGAGG 59.796 52.381 0.00 0.00 0.00 4.30
4392 5664 2.649331 ACACTTATTCACGGACGGAG 57.351 50.000 0.00 0.00 0.00 4.63
4393 5665 3.084039 AGTACACTTATTCACGGACGGA 58.916 45.455 0.00 0.00 0.00 4.69
4394 5666 3.498927 AGTACACTTATTCACGGACGG 57.501 47.619 0.00 0.00 0.00 4.79
4395 5667 4.730657 AGAAGTACACTTATTCACGGACG 58.269 43.478 0.00 0.00 36.11 4.79
4396 5668 7.478322 TGATAGAAGTACACTTATTCACGGAC 58.522 38.462 0.00 0.00 36.11 4.79
4397 5669 7.634671 TGATAGAAGTACACTTATTCACGGA 57.365 36.000 0.00 0.00 36.11 4.69
4398 5670 8.873215 AATGATAGAAGTACACTTATTCACGG 57.127 34.615 0.00 0.00 36.11 4.94
4406 5678 9.593134 CTTAGCAGAAATGATAGAAGTACACTT 57.407 33.333 0.00 0.00 39.23 3.16
4408 5680 8.934507 ACTTAGCAGAAATGATAGAAGTACAC 57.065 34.615 0.00 0.00 0.00 2.90
4413 5685 9.160496 ACTTTGACTTAGCAGAAATGATAGAAG 57.840 33.333 0.00 0.00 0.00 2.85
4414 5686 9.507329 AACTTTGACTTAGCAGAAATGATAGAA 57.493 29.630 0.00 0.00 0.00 2.10
4415 5687 9.507329 AAACTTTGACTTAGCAGAAATGATAGA 57.493 29.630 0.00 0.00 0.00 1.98
4446 5718 9.190317 ACTCTTTTCTAAAAAGTTGGTCAGAAT 57.810 29.630 10.91 0.00 0.00 2.40
4447 5719 8.575649 ACTCTTTTCTAAAAAGTTGGTCAGAA 57.424 30.769 10.91 0.00 0.00 3.02
4448 5720 9.326413 CTACTCTTTTCTAAAAAGTTGGTCAGA 57.674 33.333 10.91 0.00 0.00 3.27
4449 5721 9.110502 ACTACTCTTTTCTAAAAAGTTGGTCAG 57.889 33.333 10.91 4.24 0.00 3.51
4506 5778 8.915654 ACTAGATTCGTTTTGAAATGCATTTTC 58.084 29.630 24.81 17.47 43.42 2.29
4507 5779 8.702438 CACTAGATTCGTTTTGAAATGCATTTT 58.298 29.630 24.81 9.69 40.71 1.82
4508 5780 8.081633 TCACTAGATTCGTTTTGAAATGCATTT 58.918 29.630 24.33 24.33 40.71 2.32
4509 5781 7.592938 TCACTAGATTCGTTTTGAAATGCATT 58.407 30.769 5.99 5.99 40.71 3.56
4510 5782 7.144722 TCACTAGATTCGTTTTGAAATGCAT 57.855 32.000 0.00 0.00 40.71 3.96
4511 5783 6.552859 TCACTAGATTCGTTTTGAAATGCA 57.447 33.333 0.00 0.00 40.71 3.96
4512 5784 8.391106 AGTATCACTAGATTCGTTTTGAAATGC 58.609 33.333 0.00 0.00 40.71 3.56
4522 5794 9.680315 GCACTAAATTAGTATCACTAGATTCGT 57.320 33.333 5.23 0.00 37.23 3.85
4523 5795 9.130312 GGCACTAAATTAGTATCACTAGATTCG 57.870 37.037 5.23 0.00 37.23 3.34
4524 5796 9.982651 TGGCACTAAATTAGTATCACTAGATTC 57.017 33.333 5.23 0.00 37.23 2.52
4531 5803 9.612620 GCATTTATGGCACTAAATTAGTATCAC 57.387 33.333 5.23 0.00 37.23 3.06
4532 5804 9.573166 AGCATTTATGGCACTAAATTAGTATCA 57.427 29.630 5.23 7.55 37.23 2.15
4533 5805 9.831737 CAGCATTTATGGCACTAAATTAGTATC 57.168 33.333 5.23 2.20 37.23 2.24
4534 5806 8.299570 GCAGCATTTATGGCACTAAATTAGTAT 58.700 33.333 5.23 0.00 37.23 2.12
4535 5807 7.502226 AGCAGCATTTATGGCACTAAATTAGTA 59.498 33.333 5.23 0.00 37.23 1.82
4536 5808 6.322201 AGCAGCATTTATGGCACTAAATTAGT 59.678 34.615 0.00 0.00 40.28 2.24
4537 5809 6.742109 AGCAGCATTTATGGCACTAAATTAG 58.258 36.000 0.00 0.00 30.68 1.73
4538 5810 6.713762 AGCAGCATTTATGGCACTAAATTA 57.286 33.333 0.00 0.00 30.68 1.40
4539 5811 5.603170 AGCAGCATTTATGGCACTAAATT 57.397 34.783 0.00 0.00 30.68 1.82
4540 5812 6.906157 ATAGCAGCATTTATGGCACTAAAT 57.094 33.333 0.00 0.00 32.76 1.40
4541 5813 6.713762 AATAGCAGCATTTATGGCACTAAA 57.286 33.333 0.00 0.00 0.00 1.85
4542 5814 6.713762 AAATAGCAGCATTTATGGCACTAA 57.286 33.333 0.00 0.00 0.00 2.24
4543 5815 6.713762 AAAATAGCAGCATTTATGGCACTA 57.286 33.333 0.00 0.00 0.00 2.74
4544 5816 5.603170 AAAATAGCAGCATTTATGGCACT 57.397 34.783 0.00 0.00 0.00 4.40
4591 5863 9.788960 CTAGCTTTTGTCTTAAGTCAAAGTTTT 57.211 29.630 21.47 13.93 35.29 2.43
4592 5864 9.174166 TCTAGCTTTTGTCTTAAGTCAAAGTTT 57.826 29.630 21.47 15.16 35.29 2.66
4593 5865 8.732746 TCTAGCTTTTGTCTTAAGTCAAAGTT 57.267 30.769 21.47 17.02 35.29 2.66
4594 5866 8.778358 CATCTAGCTTTTGTCTTAAGTCAAAGT 58.222 33.333 21.47 15.13 35.29 2.66
4595 5867 8.778358 ACATCTAGCTTTTGTCTTAAGTCAAAG 58.222 33.333 21.47 17.68 35.29 2.77
4596 5868 8.677148 ACATCTAGCTTTTGTCTTAAGTCAAA 57.323 30.769 19.60 19.60 32.81 2.69
4597 5869 9.204570 GTACATCTAGCTTTTGTCTTAAGTCAA 57.795 33.333 10.54 10.54 0.00 3.18
4598 5870 8.364894 TGTACATCTAGCTTTTGTCTTAAGTCA 58.635 33.333 1.63 0.00 0.00 3.41
4599 5871 8.648968 GTGTACATCTAGCTTTTGTCTTAAGTC 58.351 37.037 0.00 0.00 0.00 3.01
4600 5872 8.368668 AGTGTACATCTAGCTTTTGTCTTAAGT 58.631 33.333 0.00 0.00 0.00 2.24
4601 5873 8.764524 AGTGTACATCTAGCTTTTGTCTTAAG 57.235 34.615 0.00 0.00 0.00 1.85
4602 5874 8.988934 CAAGTGTACATCTAGCTTTTGTCTTAA 58.011 33.333 0.00 0.00 0.00 1.85
4603 5875 8.148351 ACAAGTGTACATCTAGCTTTTGTCTTA 58.852 33.333 0.00 0.00 0.00 2.10
4604 5876 6.992715 ACAAGTGTACATCTAGCTTTTGTCTT 59.007 34.615 0.00 0.00 0.00 3.01
4605 5877 6.525629 ACAAGTGTACATCTAGCTTTTGTCT 58.474 36.000 0.00 0.00 0.00 3.41
4606 5878 6.787085 ACAAGTGTACATCTAGCTTTTGTC 57.213 37.500 0.00 0.00 0.00 3.18
4607 5879 6.073765 CGAACAAGTGTACATCTAGCTTTTGT 60.074 38.462 0.00 0.00 0.00 2.83
4608 5880 6.299604 CGAACAAGTGTACATCTAGCTTTTG 58.700 40.000 0.00 0.00 0.00 2.44
4609 5881 5.107065 GCGAACAAGTGTACATCTAGCTTTT 60.107 40.000 0.00 0.00 0.00 2.27
4610 5882 4.389077 GCGAACAAGTGTACATCTAGCTTT 59.611 41.667 0.00 0.00 0.00 3.51
4611 5883 3.927142 GCGAACAAGTGTACATCTAGCTT 59.073 43.478 0.00 0.00 0.00 3.74
4612 5884 3.512680 GCGAACAAGTGTACATCTAGCT 58.487 45.455 0.00 0.00 0.00 3.32
4613 5885 2.279136 CGCGAACAAGTGTACATCTAGC 59.721 50.000 0.00 0.00 0.00 3.42
4614 5886 2.852413 CCGCGAACAAGTGTACATCTAG 59.148 50.000 8.23 0.00 0.00 2.43
4615 5887 2.488937 TCCGCGAACAAGTGTACATCTA 59.511 45.455 8.23 0.00 0.00 1.98
4616 5888 1.271379 TCCGCGAACAAGTGTACATCT 59.729 47.619 8.23 0.00 0.00 2.90
4617 5889 1.389106 GTCCGCGAACAAGTGTACATC 59.611 52.381 8.23 0.00 0.00 3.06
4618 5890 1.425412 GTCCGCGAACAAGTGTACAT 58.575 50.000 8.23 0.00 0.00 2.29
4619 5891 0.935831 CGTCCGCGAACAAGTGTACA 60.936 55.000 8.23 0.00 41.33 2.90
4620 5892 1.611592 CCGTCCGCGAACAAGTGTAC 61.612 60.000 8.23 0.00 41.33 2.90
4621 5893 1.372004 CCGTCCGCGAACAAGTGTA 60.372 57.895 8.23 0.00 41.33 2.90
4622 5894 2.660552 CCGTCCGCGAACAAGTGT 60.661 61.111 8.23 0.00 41.33 3.55
4623 5895 2.355363 TCCGTCCGCGAACAAGTG 60.355 61.111 8.23 0.00 41.33 3.16
4624 5896 2.049433 CTCCGTCCGCGAACAAGT 60.049 61.111 8.23 0.00 41.33 3.16
4625 5897 2.809601 CCTCCGTCCGCGAACAAG 60.810 66.667 8.23 0.00 41.33 3.16
4626 5898 4.367023 CCCTCCGTCCGCGAACAA 62.367 66.667 8.23 0.00 41.33 2.83
4628 5900 4.493747 CTCCCTCCGTCCGCGAAC 62.494 72.222 8.23 0.00 41.33 3.95
4629 5901 2.898920 ATACTCCCTCCGTCCGCGAA 62.899 60.000 8.23 0.00 41.33 4.70
4630 5902 2.898920 AATACTCCCTCCGTCCGCGA 62.899 60.000 8.23 0.00 41.33 5.87
4631 5903 2.012902 AAATACTCCCTCCGTCCGCG 62.013 60.000 0.00 0.00 37.95 6.46
4632 5904 0.529992 CAAATACTCCCTCCGTCCGC 60.530 60.000 0.00 0.00 0.00 5.54
4633 5905 0.822164 ACAAATACTCCCTCCGTCCG 59.178 55.000 0.00 0.00 0.00 4.79
4634 5906 3.007635 CAAACAAATACTCCCTCCGTCC 58.992 50.000 0.00 0.00 0.00 4.79
4635 5907 3.007635 CCAAACAAATACTCCCTCCGTC 58.992 50.000 0.00 0.00 0.00 4.79
4636 5908 2.374170 ACCAAACAAATACTCCCTCCGT 59.626 45.455 0.00 0.00 0.00 4.69
4637 5909 3.067684 ACCAAACAAATACTCCCTCCG 57.932 47.619 0.00 0.00 0.00 4.63
4638 5910 4.021456 CCAAACCAAACAAATACTCCCTCC 60.021 45.833 0.00 0.00 0.00 4.30
4639 5911 4.587262 ACCAAACCAAACAAATACTCCCTC 59.413 41.667 0.00 0.00 0.00 4.30
4640 5912 4.552674 ACCAAACCAAACAAATACTCCCT 58.447 39.130 0.00 0.00 0.00 4.20
4641 5913 4.948341 ACCAAACCAAACAAATACTCCC 57.052 40.909 0.00 0.00 0.00 4.30
4642 5914 4.509970 GCAACCAAACCAAACAAATACTCC 59.490 41.667 0.00 0.00 0.00 3.85
4643 5915 5.234116 CAGCAACCAAACCAAACAAATACTC 59.766 40.000 0.00 0.00 0.00 2.59
4644 5916 5.115480 CAGCAACCAAACCAAACAAATACT 58.885 37.500 0.00 0.00 0.00 2.12
4645 5917 4.260579 GCAGCAACCAAACCAAACAAATAC 60.261 41.667 0.00 0.00 0.00 1.89
4646 5918 3.873952 GCAGCAACCAAACCAAACAAATA 59.126 39.130 0.00 0.00 0.00 1.40
4647 5919 2.682352 GCAGCAACCAAACCAAACAAAT 59.318 40.909 0.00 0.00 0.00 2.32
4648 5920 2.079925 GCAGCAACCAAACCAAACAAA 58.920 42.857 0.00 0.00 0.00 2.83
4649 5921 1.277557 AGCAGCAACCAAACCAAACAA 59.722 42.857 0.00 0.00 0.00 2.83
4650 5922 0.901124 AGCAGCAACCAAACCAAACA 59.099 45.000 0.00 0.00 0.00 2.83
4651 5923 1.289276 CAGCAGCAACCAAACCAAAC 58.711 50.000 0.00 0.00 0.00 2.93
4697 5971 1.215423 ACTTCAAACACCCTCTGCCTT 59.785 47.619 0.00 0.00 0.00 4.35
4740 6014 0.905357 ATACAGAGCACCCACCACTC 59.095 55.000 0.00 0.00 0.00 3.51
4744 6018 1.139058 CAGGTATACAGAGCACCCACC 59.861 57.143 5.01 0.00 32.43 4.61
4759 6033 3.836562 GGTCACCCTCTTCTTTACAGGTA 59.163 47.826 0.00 0.00 0.00 3.08
4760 6034 2.638363 GGTCACCCTCTTCTTTACAGGT 59.362 50.000 0.00 0.00 0.00 4.00
4777 6051 1.471287 CAGTTATCTCACGGACGGTCA 59.529 52.381 10.76 0.00 0.00 4.02
4778 6052 1.471684 ACAGTTATCTCACGGACGGTC 59.528 52.381 0.00 0.00 0.00 4.79
4779 6053 1.471684 GACAGTTATCTCACGGACGGT 59.528 52.381 0.00 0.00 0.00 4.83
4780 6054 1.471287 TGACAGTTATCTCACGGACGG 59.529 52.381 0.00 0.00 0.00 4.79
4781 6055 2.786854 CTGACAGTTATCTCACGGACG 58.213 52.381 0.00 0.00 0.00 4.79
4782 6056 2.531206 GCTGACAGTTATCTCACGGAC 58.469 52.381 3.99 0.00 0.00 4.79
4783 6057 1.476891 GGCTGACAGTTATCTCACGGA 59.523 52.381 3.99 0.00 0.00 4.69
4784 6058 1.799181 CGGCTGACAGTTATCTCACGG 60.799 57.143 3.99 0.00 0.00 4.94
4785 6059 1.132453 TCGGCTGACAGTTATCTCACG 59.868 52.381 3.99 0.00 0.00 4.35
4786 6060 2.164624 ACTCGGCTGACAGTTATCTCAC 59.835 50.000 3.99 0.00 0.00 3.51
4787 6061 2.164422 CACTCGGCTGACAGTTATCTCA 59.836 50.000 3.99 0.00 0.00 3.27
4788 6062 2.423892 TCACTCGGCTGACAGTTATCTC 59.576 50.000 3.99 0.00 0.00 2.75
4789 6063 2.425312 CTCACTCGGCTGACAGTTATCT 59.575 50.000 3.99 0.00 0.00 1.98
4790 6064 2.803451 CTCACTCGGCTGACAGTTATC 58.197 52.381 3.99 0.00 0.00 1.75
4791 6065 1.134965 GCTCACTCGGCTGACAGTTAT 60.135 52.381 3.99 0.00 0.00 1.89
4792 6066 0.243907 GCTCACTCGGCTGACAGTTA 59.756 55.000 3.99 0.00 0.00 2.24
4793 6067 1.005630 GCTCACTCGGCTGACAGTT 60.006 57.895 3.99 0.00 0.00 3.16
4794 6068 1.905843 AGCTCACTCGGCTGACAGT 60.906 57.895 3.99 0.00 38.73 3.55
4795 6069 2.969016 AGCTCACTCGGCTGACAG 59.031 61.111 0.00 0.00 38.73 3.51
4842 6116 9.368674 CATGCTTGAAATTGGTTATACATGAAA 57.631 29.630 0.00 0.00 34.54 2.69
4849 6123 7.319646 GTGGTTCATGCTTGAAATTGGTTATA 58.680 34.615 15.87 0.00 43.29 0.98
4850 6124 6.165577 GTGGTTCATGCTTGAAATTGGTTAT 58.834 36.000 15.87 0.00 43.29 1.89
4851 6125 5.537188 GTGGTTCATGCTTGAAATTGGTTA 58.463 37.500 15.87 0.00 43.29 2.85
4852 6126 4.379652 GTGGTTCATGCTTGAAATTGGTT 58.620 39.130 15.87 0.00 43.29 3.67
4853 6127 3.552684 CGTGGTTCATGCTTGAAATTGGT 60.553 43.478 15.87 0.00 43.29 3.67
4879 6153 0.550914 TGGGCCAACAGAACAGTTCT 59.449 50.000 10.27 10.27 41.70 3.01
4880 6154 0.954452 CTGGGCCAACAGAACAGTTC 59.046 55.000 8.04 5.00 40.97 3.01
4881 6155 0.258774 ACTGGGCCAACAGAACAGTT 59.741 50.000 15.14 0.00 39.16 3.16
4883 6157 0.466189 ACACTGGGCCAACAGAACAG 60.466 55.000 15.14 8.51 40.97 3.16
4884 6158 0.840617 TACACTGGGCCAACAGAACA 59.159 50.000 15.14 0.00 40.97 3.18
4885 6159 1.975660 TTACACTGGGCCAACAGAAC 58.024 50.000 15.14 0.00 40.97 3.01
4886 6160 2.969821 ATTACACTGGGCCAACAGAA 57.030 45.000 15.14 0.00 40.97 3.02
4887 6161 2.107378 TGAATTACACTGGGCCAACAGA 59.893 45.455 15.14 0.00 40.97 3.41
4888 6162 2.228822 GTGAATTACACTGGGCCAACAG 59.771 50.000 8.04 6.23 45.13 3.16
4889 6163 2.235016 GTGAATTACACTGGGCCAACA 58.765 47.619 8.04 0.00 45.13 3.33
4895 6169 7.561454 CTGTAAGAGCTGTGAATTACACTGGG 61.561 46.154 0.00 0.00 43.18 4.45
4896 6170 5.349817 CTGTAAGAGCTGTGAATTACACTGG 59.650 44.000 0.00 0.00 43.18 4.00
4897 6171 5.928839 ACTGTAAGAGCTGTGAATTACACTG 59.071 40.000 0.00 0.00 43.35 3.66
4898 6172 5.928839 CACTGTAAGAGCTGTGAATTACACT 59.071 40.000 0.00 0.00 43.35 3.55
4899 6173 5.926542 TCACTGTAAGAGCTGTGAATTACAC 59.073 40.000 0.00 0.00 41.87 2.90
4900 6174 6.096673 TCACTGTAAGAGCTGTGAATTACA 57.903 37.500 0.00 0.00 41.87 2.41
4906 6180 2.698274 TGGTTCACTGTAAGAGCTGTGA 59.302 45.455 0.00 0.00 42.67 3.58
4907 6181 3.111853 TGGTTCACTGTAAGAGCTGTG 57.888 47.619 0.00 0.00 38.92 3.66
4908 6182 3.668447 CATGGTTCACTGTAAGAGCTGT 58.332 45.455 0.00 0.00 37.43 4.40
4909 6183 2.417933 GCATGGTTCACTGTAAGAGCTG 59.582 50.000 0.00 0.00 37.43 4.24
4910 6184 2.304180 AGCATGGTTCACTGTAAGAGCT 59.696 45.455 0.00 0.00 37.43 4.09
4911 6185 2.417933 CAGCATGGTTCACTGTAAGAGC 59.582 50.000 0.00 0.00 37.43 4.09
4912 6186 3.434641 CACAGCATGGTTCACTGTAAGAG 59.565 47.826 0.00 0.00 42.59 2.85
4913 6187 3.402110 CACAGCATGGTTCACTGTAAGA 58.598 45.455 0.00 0.00 42.59 2.10
4914 6188 2.095567 GCACAGCATGGTTCACTGTAAG 60.096 50.000 0.00 0.00 42.59 2.34
4915 6189 1.879380 GCACAGCATGGTTCACTGTAA 59.121 47.619 0.00 0.00 42.59 2.41
4916 6190 1.202746 TGCACAGCATGGTTCACTGTA 60.203 47.619 0.00 0.00 42.59 2.74
4917 6191 0.466007 TGCACAGCATGGTTCACTGT 60.466 50.000 0.00 0.00 45.25 3.55
4918 6192 0.669619 TTGCACAGCATGGTTCACTG 59.330 50.000 0.00 0.00 43.62 3.66
4919 6193 1.338973 CTTTGCACAGCATGGTTCACT 59.661 47.619 0.00 0.00 43.62 3.41
4920 6194 1.337703 TCTTTGCACAGCATGGTTCAC 59.662 47.619 0.00 0.00 43.62 3.18
4921 6195 1.337703 GTCTTTGCACAGCATGGTTCA 59.662 47.619 0.00 0.00 43.62 3.18
4922 6196 1.336240 GGTCTTTGCACAGCATGGTTC 60.336 52.381 0.00 0.00 43.62 3.62
4923 6197 0.675633 GGTCTTTGCACAGCATGGTT 59.324 50.000 0.00 0.00 43.62 3.67
4924 6198 1.181098 GGGTCTTTGCACAGCATGGT 61.181 55.000 0.00 0.00 43.62 3.55
4925 6199 1.180456 TGGGTCTTTGCACAGCATGG 61.180 55.000 0.00 0.00 43.62 3.66
4926 6200 0.675083 TTGGGTCTTTGCACAGCATG 59.325 50.000 0.00 0.00 46.00 4.06
4927 6201 1.069049 GTTTGGGTCTTTGCACAGCAT 59.931 47.619 0.00 0.00 38.76 3.79
4928 6202 0.459489 GTTTGGGTCTTTGCACAGCA 59.541 50.000 0.00 0.00 36.47 4.41
4929 6203 0.459489 TGTTTGGGTCTTTGCACAGC 59.541 50.000 0.00 0.00 0.00 4.40
4930 6204 2.957491 TTGTTTGGGTCTTTGCACAG 57.043 45.000 0.00 0.00 0.00 3.66
4931 6205 2.676463 GCTTTGTTTGGGTCTTTGCACA 60.676 45.455 0.00 0.00 0.00 4.57
4932 6206 1.933181 GCTTTGTTTGGGTCTTTGCAC 59.067 47.619 0.00 0.00 0.00 4.57
4933 6207 1.830477 AGCTTTGTTTGGGTCTTTGCA 59.170 42.857 0.00 0.00 0.00 4.08
4934 6208 2.602257 AGCTTTGTTTGGGTCTTTGC 57.398 45.000 0.00 0.00 0.00 3.68
4935 6209 6.200854 GTGAATAAGCTTTGTTTGGGTCTTTG 59.799 38.462 3.20 0.00 0.00 2.77
4936 6210 6.127196 TGTGAATAAGCTTTGTTTGGGTCTTT 60.127 34.615 3.20 0.00 0.00 2.52
4937 6211 5.362430 TGTGAATAAGCTTTGTTTGGGTCTT 59.638 36.000 3.20 0.00 0.00 3.01
4938 6212 4.892934 TGTGAATAAGCTTTGTTTGGGTCT 59.107 37.500 3.20 0.00 0.00 3.85
4939 6213 5.009610 TCTGTGAATAAGCTTTGTTTGGGTC 59.990 40.000 3.20 0.00 0.00 4.46
4940 6214 4.892934 TCTGTGAATAAGCTTTGTTTGGGT 59.107 37.500 3.20 0.00 0.00 4.51
4941 6215 5.452078 TCTGTGAATAAGCTTTGTTTGGG 57.548 39.130 3.20 0.00 0.00 4.12
4942 6216 5.865552 CCATCTGTGAATAAGCTTTGTTTGG 59.134 40.000 3.20 0.61 0.00 3.28
4943 6217 6.680810 TCCATCTGTGAATAAGCTTTGTTTG 58.319 36.000 3.20 0.00 0.00 2.93
4944 6218 6.899393 TCCATCTGTGAATAAGCTTTGTTT 57.101 33.333 3.20 0.00 0.00 2.83
4945 6219 6.265196 TGTTCCATCTGTGAATAAGCTTTGTT 59.735 34.615 3.20 0.00 0.00 2.83
4946 6220 5.769662 TGTTCCATCTGTGAATAAGCTTTGT 59.230 36.000 3.20 0.00 0.00 2.83
4947 6221 6.258230 TGTTCCATCTGTGAATAAGCTTTG 57.742 37.500 3.20 0.00 0.00 2.77
4948 6222 6.899393 TTGTTCCATCTGTGAATAAGCTTT 57.101 33.333 3.20 0.00 0.00 3.51
4949 6223 8.462016 GTTATTGTTCCATCTGTGAATAAGCTT 58.538 33.333 3.48 3.48 0.00 3.74
4950 6224 7.611467 TGTTATTGTTCCATCTGTGAATAAGCT 59.389 33.333 0.00 0.00 0.00 3.74
4951 6225 7.698130 GTGTTATTGTTCCATCTGTGAATAAGC 59.302 37.037 0.00 0.00 0.00 3.09
4952 6226 8.950210 AGTGTTATTGTTCCATCTGTGAATAAG 58.050 33.333 0.00 0.00 0.00 1.73
4953 6227 8.862325 AGTGTTATTGTTCCATCTGTGAATAA 57.138 30.769 0.00 0.00 0.00 1.40
4954 6228 8.862325 AAGTGTTATTGTTCCATCTGTGAATA 57.138 30.769 0.00 0.00 0.00 1.75
4955 6229 7.765695 AAGTGTTATTGTTCCATCTGTGAAT 57.234 32.000 0.00 0.00 0.00 2.57
4956 6230 8.564574 GTTAAGTGTTATTGTTCCATCTGTGAA 58.435 33.333 0.00 0.00 0.00 3.18
4957 6231 7.936847 AGTTAAGTGTTATTGTTCCATCTGTGA 59.063 33.333 0.00 0.00 0.00 3.58
4958 6232 8.017373 CAGTTAAGTGTTATTGTTCCATCTGTG 58.983 37.037 1.85 0.00 0.00 3.66
4962 6236 8.237267 CCTTCAGTTAAGTGTTATTGTTCCATC 58.763 37.037 10.08 0.00 32.89 3.51
4964 6238 6.016610 GCCTTCAGTTAAGTGTTATTGTTCCA 60.017 38.462 10.08 0.00 32.89 3.53
4985 6259 4.379652 CCAAATGTTTAAACTGCTGCCTT 58.620 39.130 18.72 0.45 0.00 4.35
4988 6262 3.988819 TCCCAAATGTTTAAACTGCTGC 58.011 40.909 18.72 0.00 0.00 5.25
4990 6264 4.837860 TGGATCCCAAATGTTTAAACTGCT 59.162 37.500 18.72 1.86 0.00 4.24
5168 6534 2.365293 CTGGGCCACTTTAAAACAGCTT 59.635 45.455 0.00 0.00 0.00 3.74
5233 6599 2.168326 TCTCAGCGACTGCATTTCAA 57.832 45.000 0.00 0.00 46.23 2.69
5253 6619 0.325296 CCAGGGTCCAGGCTAGTACA 60.325 60.000 0.00 0.00 0.00 2.90
5254 6620 0.032416 TCCAGGGTCCAGGCTAGTAC 60.032 60.000 0.00 0.00 0.00 2.73
5255 6621 0.261991 CTCCAGGGTCCAGGCTAGTA 59.738 60.000 0.00 0.00 0.00 1.82
5257 6623 0.758685 CTCTCCAGGGTCCAGGCTAG 60.759 65.000 0.00 0.00 0.00 3.42
5258 6624 1.311403 CTCTCCAGGGTCCAGGCTA 59.689 63.158 0.00 0.00 0.00 3.93
5259 6625 2.040278 CTCTCCAGGGTCCAGGCT 59.960 66.667 0.00 0.00 0.00 4.58
5260 6626 2.284995 ACTCTCCAGGGTCCAGGC 60.285 66.667 0.00 0.00 0.00 4.85
5261 6627 1.992277 CCACTCTCCAGGGTCCAGG 60.992 68.421 0.00 0.00 0.00 4.45
5262 6628 2.664081 GCCACTCTCCAGGGTCCAG 61.664 68.421 0.00 0.00 0.00 3.86
5263 6629 2.607750 GCCACTCTCCAGGGTCCA 60.608 66.667 0.00 0.00 0.00 4.02
5264 6630 3.775654 CGCCACTCTCCAGGGTCC 61.776 72.222 0.00 0.00 0.00 4.46
5265 6631 2.680352 TCGCCACTCTCCAGGGTC 60.680 66.667 0.00 0.00 0.00 4.46
5266 6632 2.997897 GTCGCCACTCTCCAGGGT 60.998 66.667 0.00 0.00 0.00 4.34
5267 6633 2.681778 AGTCGCCACTCTCCAGGG 60.682 66.667 0.00 0.00 0.00 4.45
5324 6690 0.865111 GCCCGGTTGATTGCAAAAAC 59.135 50.000 16.23 16.23 35.42 2.43


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.