Multiple sequence alignment - TraesCS4D01G191500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G191500 chr4D 100.000 2748 0 0 1 2748 334966110 334968857 0.000000e+00 5075.0
1 TraesCS4D01G191500 chr4D 95.851 241 8 1 1 241 54804862 54805100 3.320000e-104 388.0
2 TraesCS4D01G191500 chr4D 92.116 241 18 1 2 242 46415499 46415260 3.390000e-89 339.0
3 TraesCS4D01G191500 chr4D 87.597 129 8 5 1921 2044 335037494 335037619 2.850000e-30 143.0
4 TraesCS4D01G191500 chr4A 94.297 754 25 9 1304 2047 138313682 138312937 0.000000e+00 1138.0
5 TraesCS4D01G191500 chr4A 91.564 652 42 10 601 1250 138314413 138313773 0.000000e+00 887.0
6 TraesCS4D01G191500 chr4A 91.736 242 18 2 2 242 552509592 552509832 4.380000e-88 335.0
7 TraesCS4D01G191500 chr4A 87.705 244 25 5 2479 2717 138272288 138272045 2.080000e-71 279.0
8 TraesCS4D01G191500 chr4A 91.954 174 10 4 2051 2222 138312904 138312733 9.830000e-60 241.0
9 TraesCS4D01G191500 chr4A 90.323 124 8 3 1921 2043 137968597 137968477 2.830000e-35 159.0
10 TraesCS4D01G191500 chr4B 92.866 771 37 13 1962 2717 413014714 413015481 0.000000e+00 1103.0
11 TraesCS4D01G191500 chr4B 95.789 570 17 6 1304 1871 413014077 413014641 0.000000e+00 913.0
12 TraesCS4D01G191500 chr4B 89.822 619 46 8 642 1250 413013375 413013986 0.000000e+00 778.0
13 TraesCS4D01G191500 chr4B 89.764 127 8 4 1921 2044 413113517 413113641 1.020000e-34 158.0
14 TraesCS4D01G191500 chr1D 94.694 245 11 1 1 245 476796307 476796065 2.000000e-101 379.0
15 TraesCS4D01G191500 chr2D 94.606 241 12 1 1 241 189837177 189836938 3.340000e-99 372.0
16 TraesCS4D01G191500 chr7D 93.776 241 14 1 1 241 605183508 605183269 7.230000e-96 361.0
17 TraesCS4D01G191500 chr3D 93.361 241 14 1 1 241 604567555 604567317 3.370000e-94 355.0
18 TraesCS4D01G191500 chr3D 92.531 241 17 1 1 241 75614796 75614557 7.290000e-91 344.0
19 TraesCS4D01G191500 chr3D 95.833 96 2 2 1952 2045 19360305 19360210 1.320000e-33 154.0
20 TraesCS4D01G191500 chr3D 86.585 82 11 0 497 578 605319495 605319414 1.050000e-14 91.6
21 TraesCS4D01G191500 chr5D 91.770 243 16 3 1 243 537327461 537327699 4.380000e-88 335.0
22 TraesCS4D01G191500 chr7B 91.111 180 15 1 1304 1482 592674136 592674315 2.730000e-60 243.0
23 TraesCS4D01G191500 chr7B 91.111 180 15 1 1304 1482 619426376 619426197 2.730000e-60 243.0
24 TraesCS4D01G191500 chr7B 82.105 95 10 3 489 577 90730996 90730903 1.060000e-09 75.0
25 TraesCS4D01G191500 chr2B 94.000 100 4 2 1948 2046 65318008 65317910 1.700000e-32 150.0
26 TraesCS4D01G191500 chr1A 94.845 97 1 3 1951 2047 132795547 132795455 6.130000e-32 148.0
27 TraesCS4D01G191500 chr1A 93.069 101 5 2 1945 2043 490796162 490796262 2.210000e-31 147.0
28 TraesCS4D01G191500 chrUn 86.585 82 11 0 497 578 258941923 258942004 1.050000e-14 91.6
29 TraesCS4D01G191500 chr5A 100.000 28 0 0 550 577 475651045 475651072 5.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G191500 chr4D 334966110 334968857 2747 False 5075.000000 5075 100.000000 1 2748 1 chr4D.!!$F2 2747
1 TraesCS4D01G191500 chr4A 138312733 138314413 1680 True 755.333333 1138 92.605000 601 2222 3 chr4A.!!$R3 1621
2 TraesCS4D01G191500 chr4B 413013375 413015481 2106 False 931.333333 1103 92.825667 642 2717 3 chr4B.!!$F2 2075

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
335 336 0.034896 GAGAAAGGTTGTGCGGAGGA 59.965 55.0 0.0 0.0 0.0 3.71 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1751 1821 0.235144 GCGAGCGCGACTAGAATCTA 59.765 55.0 15.92 0.0 40.82 1.98 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 6.003950 TGTGATAATGGGCCTAATCTAAAGC 58.996 40.000 4.53 0.00 0.00 3.51
26 27 5.416013 GTGATAATGGGCCTAATCTAAAGCC 59.584 44.000 4.53 0.00 44.99 4.35
30 31 1.610363 GGCCTAATCTAAAGCCCAGC 58.390 55.000 0.00 0.00 39.60 4.85
31 32 1.143889 GGCCTAATCTAAAGCCCAGCT 59.856 52.381 0.00 0.00 42.56 4.24
40 41 3.987404 AGCCCAGCTTAAGTTGCG 58.013 55.556 13.42 6.70 33.89 4.85
41 42 1.073199 AGCCCAGCTTAAGTTGCGT 59.927 52.632 13.42 0.00 33.89 5.24
42 43 0.323629 AGCCCAGCTTAAGTTGCGTA 59.676 50.000 13.42 0.00 33.89 4.42
43 44 0.446616 GCCCAGCTTAAGTTGCGTAC 59.553 55.000 13.42 0.00 35.28 3.67
44 45 1.944430 GCCCAGCTTAAGTTGCGTACT 60.944 52.381 13.42 0.00 39.32 2.73
45 46 2.675889 GCCCAGCTTAAGTTGCGTACTA 60.676 50.000 13.42 0.00 35.54 1.82
46 47 3.793559 CCCAGCTTAAGTTGCGTACTAT 58.206 45.455 13.42 0.00 35.54 2.12
47 48 4.189231 CCCAGCTTAAGTTGCGTACTATT 58.811 43.478 13.42 0.00 35.54 1.73
48 49 4.634443 CCCAGCTTAAGTTGCGTACTATTT 59.366 41.667 13.42 0.00 35.54 1.40
49 50 5.813672 CCCAGCTTAAGTTGCGTACTATTTA 59.186 40.000 13.42 0.00 35.54 1.40
50 51 6.238022 CCCAGCTTAAGTTGCGTACTATTTAC 60.238 42.308 13.42 0.00 35.54 2.01
51 52 6.534079 CCAGCTTAAGTTGCGTACTATTTACT 59.466 38.462 13.42 0.00 35.54 2.24
52 53 7.391786 CAGCTTAAGTTGCGTACTATTTACTG 58.608 38.462 6.37 0.00 35.54 2.74
53 54 7.063074 CAGCTTAAGTTGCGTACTATTTACTGT 59.937 37.037 6.37 0.00 35.54 3.55
54 55 7.275123 AGCTTAAGTTGCGTACTATTTACTGTC 59.725 37.037 4.02 0.00 35.54 3.51
55 56 7.496704 TTAAGTTGCGTACTATTTACTGTCG 57.503 36.000 0.00 0.00 35.54 4.35
56 57 5.300969 AGTTGCGTACTATTTACTGTCGA 57.699 39.130 0.00 0.00 34.56 4.20
57 58 5.702865 AGTTGCGTACTATTTACTGTCGAA 58.297 37.500 0.00 0.00 34.56 3.71
58 59 6.327934 AGTTGCGTACTATTTACTGTCGAAT 58.672 36.000 0.00 0.00 34.56 3.34
59 60 6.810182 AGTTGCGTACTATTTACTGTCGAATT 59.190 34.615 0.00 0.00 34.56 2.17
60 61 7.330208 AGTTGCGTACTATTTACTGTCGAATTT 59.670 33.333 0.00 0.00 34.56 1.82
61 62 6.985013 TGCGTACTATTTACTGTCGAATTTG 58.015 36.000 0.00 0.00 0.00 2.32
62 63 6.587226 TGCGTACTATTTACTGTCGAATTTGT 59.413 34.615 0.00 0.00 0.00 2.83
63 64 7.109257 GCGTACTATTTACTGTCGAATTTGTC 58.891 38.462 0.00 0.00 0.00 3.18
64 65 7.201376 GCGTACTATTTACTGTCGAATTTGTCA 60.201 37.037 0.00 0.00 0.00 3.58
65 66 8.804743 CGTACTATTTACTGTCGAATTTGTCAT 58.195 33.333 0.00 0.00 0.00 3.06
74 75 8.728088 ACTGTCGAATTTGTCATTTATGTTTC 57.272 30.769 0.00 0.00 0.00 2.78
75 76 8.567948 ACTGTCGAATTTGTCATTTATGTTTCT 58.432 29.630 0.00 0.00 0.00 2.52
76 77 8.948853 TGTCGAATTTGTCATTTATGTTTCTC 57.051 30.769 0.00 0.00 0.00 2.87
77 78 8.563732 TGTCGAATTTGTCATTTATGTTTCTCA 58.436 29.630 0.00 0.00 0.00 3.27
78 79 9.393249 GTCGAATTTGTCATTTATGTTTCTCAA 57.607 29.630 0.00 0.00 0.00 3.02
79 80 9.611284 TCGAATTTGTCATTTATGTTTCTCAAG 57.389 29.630 0.00 0.00 0.00 3.02
80 81 8.368126 CGAATTTGTCATTTATGTTTCTCAAGC 58.632 33.333 0.00 0.00 0.00 4.01
81 82 9.415544 GAATTTGTCATTTATGTTTCTCAAGCT 57.584 29.630 0.00 0.00 0.00 3.74
84 85 9.844790 TTTGTCATTTATGTTTCTCAAGCTATG 57.155 29.630 0.00 0.00 0.00 2.23
85 86 8.565896 TGTCATTTATGTTTCTCAAGCTATGT 57.434 30.769 0.00 0.00 0.00 2.29
86 87 9.013229 TGTCATTTATGTTTCTCAAGCTATGTT 57.987 29.630 0.00 0.00 0.00 2.71
87 88 9.846248 GTCATTTATGTTTCTCAAGCTATGTTT 57.154 29.630 0.00 0.00 0.00 2.83
94 95 9.768662 ATGTTTCTCAAGCTATGTTTTGAATTT 57.231 25.926 0.00 0.00 33.30 1.82
95 96 9.598517 TGTTTCTCAAGCTATGTTTTGAATTTT 57.401 25.926 0.00 0.00 33.30 1.82
96 97 9.853921 GTTTCTCAAGCTATGTTTTGAATTTTG 57.146 29.630 0.00 0.00 33.30 2.44
97 98 9.814899 TTTCTCAAGCTATGTTTTGAATTTTGA 57.185 25.926 0.00 0.00 33.30 2.69
98 99 9.985730 TTCTCAAGCTATGTTTTGAATTTTGAT 57.014 25.926 0.00 0.00 33.30 2.57
136 137 5.431420 AACATACTTTGATGTTGCGTCAA 57.569 34.783 1.14 0.18 46.00 3.18
137 138 5.627499 ACATACTTTGATGTTGCGTCAAT 57.373 34.783 4.84 0.00 38.85 2.57
138 139 5.393124 ACATACTTTGATGTTGCGTCAATG 58.607 37.500 12.43 12.43 38.85 2.82
139 140 3.988379 ACTTTGATGTTGCGTCAATGT 57.012 38.095 13.37 13.37 40.46 2.71
140 141 3.631144 ACTTTGATGTTGCGTCAATGTG 58.369 40.909 16.51 8.62 42.23 3.21
141 142 2.049077 TTGATGTTGCGTCAATGTGC 57.951 45.000 0.18 0.00 34.89 4.57
142 143 1.237533 TGATGTTGCGTCAATGTGCT 58.762 45.000 2.51 0.00 0.00 4.40
143 144 1.069091 TGATGTTGCGTCAATGTGCTG 60.069 47.619 2.51 0.00 0.00 4.41
144 145 0.241749 ATGTTGCGTCAATGTGCTGG 59.758 50.000 2.51 0.00 0.00 4.85
145 146 0.817229 TGTTGCGTCAATGTGCTGGA 60.817 50.000 2.51 0.00 0.00 3.86
146 147 0.523072 GTTGCGTCAATGTGCTGGAT 59.477 50.000 2.51 0.00 0.00 3.41
147 148 1.068333 GTTGCGTCAATGTGCTGGATT 60.068 47.619 2.51 0.00 0.00 3.01
148 149 1.246649 TGCGTCAATGTGCTGGATTT 58.753 45.000 2.51 0.00 0.00 2.17
149 150 1.612950 TGCGTCAATGTGCTGGATTTT 59.387 42.857 2.51 0.00 0.00 1.82
150 151 2.035704 TGCGTCAATGTGCTGGATTTTT 59.964 40.909 2.51 0.00 0.00 1.94
195 196 9.121517 CATTTAGAAATGTGCTACAGAGTTTTG 57.878 33.333 6.79 0.00 40.61 2.44
196 197 5.695851 AGAAATGTGCTACAGAGTTTTGG 57.304 39.130 0.00 0.00 0.00 3.28
197 198 5.376625 AGAAATGTGCTACAGAGTTTTGGA 58.623 37.500 0.00 0.00 0.00 3.53
198 199 5.471456 AGAAATGTGCTACAGAGTTTTGGAG 59.529 40.000 0.00 0.00 31.85 3.86
205 206 3.409026 ACAGAGTTTTGGAGCACTAGG 57.591 47.619 0.00 0.00 0.00 3.02
206 207 2.972713 ACAGAGTTTTGGAGCACTAGGA 59.027 45.455 0.00 0.00 0.00 2.94
207 208 3.007398 ACAGAGTTTTGGAGCACTAGGAG 59.993 47.826 0.00 0.00 0.00 3.69
208 209 2.027653 AGAGTTTTGGAGCACTAGGAGC 60.028 50.000 0.00 0.00 0.00 4.70
209 210 1.699634 AGTTTTGGAGCACTAGGAGCA 59.300 47.619 11.36 0.00 0.00 4.26
210 211 1.807142 GTTTTGGAGCACTAGGAGCAC 59.193 52.381 11.36 5.47 0.00 4.40
211 212 0.324943 TTTGGAGCACTAGGAGCACC 59.675 55.000 15.62 15.62 42.19 5.01
212 213 1.553690 TTGGAGCACTAGGAGCACCC 61.554 60.000 18.36 14.70 41.32 4.61
214 215 0.397254 GGAGCACTAGGAGCACCCTA 60.397 60.000 12.71 0.38 45.48 3.53
228 229 4.722389 CCTAGGGGTGGGAGTACC 57.278 66.667 0.00 0.00 40.10 3.34
241 242 3.389983 TGGGAGTACCAGATATTTTCCCG 59.610 47.826 0.00 0.00 46.80 5.14
242 243 3.644738 GGGAGTACCAGATATTTTCCCGA 59.355 47.826 0.00 0.00 39.85 5.14
243 244 4.286291 GGGAGTACCAGATATTTTCCCGAT 59.714 45.833 0.00 0.00 39.85 4.18
244 245 5.238583 GGAGTACCAGATATTTTCCCGATG 58.761 45.833 0.00 0.00 35.97 3.84
245 246 5.221661 GGAGTACCAGATATTTTCCCGATGT 60.222 44.000 0.00 0.00 35.97 3.06
246 247 6.248569 AGTACCAGATATTTTCCCGATGTT 57.751 37.500 0.00 0.00 0.00 2.71
247 248 6.055588 AGTACCAGATATTTTCCCGATGTTG 58.944 40.000 0.00 0.00 0.00 3.33
248 249 3.632145 ACCAGATATTTTCCCGATGTTGC 59.368 43.478 0.00 0.00 0.00 4.17
249 250 3.631686 CCAGATATTTTCCCGATGTTGCA 59.368 43.478 0.00 0.00 0.00 4.08
250 251 4.261322 CCAGATATTTTCCCGATGTTGCAG 60.261 45.833 0.00 0.00 0.00 4.41
251 252 3.316308 AGATATTTTCCCGATGTTGCAGC 59.684 43.478 0.00 0.00 0.00 5.25
252 253 1.549203 ATTTTCCCGATGTTGCAGCT 58.451 45.000 1.17 0.00 0.00 4.24
253 254 2.192664 TTTTCCCGATGTTGCAGCTA 57.807 45.000 1.17 0.00 0.00 3.32
254 255 1.737838 TTTCCCGATGTTGCAGCTAG 58.262 50.000 1.17 0.00 0.00 3.42
255 256 0.744414 TTCCCGATGTTGCAGCTAGC 60.744 55.000 6.62 6.62 45.96 3.42
271 272 4.334759 CAGCTAGCATGTAATGTCAAGCTT 59.665 41.667 18.83 0.00 46.22 3.74
272 273 4.946157 AGCTAGCATGTAATGTCAAGCTTT 59.054 37.500 18.83 0.00 46.22 3.51
273 274 5.416952 AGCTAGCATGTAATGTCAAGCTTTT 59.583 36.000 18.83 0.00 46.22 2.27
274 275 6.624423 AGCTAGCATGTAATGTCAAGCTTTTG 60.624 38.462 18.83 0.00 46.22 2.44
275 276 9.441077 AGCTAGCATGTAATGTCAAGCTTTTGG 62.441 40.741 18.83 0.00 46.22 3.28
277 278 3.609373 CATGTAATGTCAAGCTTTTGGCG 59.391 43.478 0.00 0.00 42.36 5.69
278 279 4.615682 CATGTAATGTCAAGCTTTTGGCGA 60.616 41.667 0.00 0.00 42.36 5.54
279 280 6.401868 CATGTAATGTCAAGCTTTTGGCGAG 61.402 44.000 0.00 0.00 42.36 5.03
280 281 8.484478 CATGTAATGTCAAGCTTTTGGCGAGA 62.484 42.308 0.00 0.00 42.36 4.04
290 291 5.993106 GCTTTTGGCGAGAGAGTTAATAT 57.007 39.130 0.00 0.00 0.00 1.28
291 292 5.742446 GCTTTTGGCGAGAGAGTTAATATG 58.258 41.667 0.00 0.00 0.00 1.78
292 293 5.277538 GCTTTTGGCGAGAGAGTTAATATGG 60.278 44.000 0.00 0.00 0.00 2.74
293 294 5.607939 TTTGGCGAGAGAGTTAATATGGA 57.392 39.130 0.00 0.00 0.00 3.41
294 295 5.808366 TTGGCGAGAGAGTTAATATGGAT 57.192 39.130 0.00 0.00 0.00 3.41
295 296 6.911250 TTGGCGAGAGAGTTAATATGGATA 57.089 37.500 0.00 0.00 0.00 2.59
296 297 6.911250 TGGCGAGAGAGTTAATATGGATAA 57.089 37.500 0.00 0.00 0.00 1.75
297 298 7.297936 TGGCGAGAGAGTTAATATGGATAAA 57.702 36.000 0.00 0.00 0.00 1.40
298 299 7.907389 TGGCGAGAGAGTTAATATGGATAAAT 58.093 34.615 0.00 0.00 0.00 1.40
299 300 8.035394 TGGCGAGAGAGTTAATATGGATAAATC 58.965 37.037 0.00 0.00 0.00 2.17
300 301 8.254508 GGCGAGAGAGTTAATATGGATAAATCT 58.745 37.037 0.00 0.00 39.57 2.40
301 302 9.646427 GCGAGAGAGTTAATATGGATAAATCTT 57.354 33.333 0.00 0.00 37.69 2.40
322 323 9.883142 AATCTTCTATTCCACTACTTGAGAAAG 57.117 33.333 0.00 0.00 0.00 2.62
323 324 7.841956 TCTTCTATTCCACTACTTGAGAAAGG 58.158 38.462 0.00 0.00 0.00 3.11
324 325 7.455008 TCTTCTATTCCACTACTTGAGAAAGGT 59.545 37.037 0.00 0.00 0.00 3.50
325 326 7.554959 TCTATTCCACTACTTGAGAAAGGTT 57.445 36.000 0.00 0.00 0.00 3.50
326 327 7.386851 TCTATTCCACTACTTGAGAAAGGTTG 58.613 38.462 0.00 0.00 0.00 3.77
327 328 5.367945 TTCCACTACTTGAGAAAGGTTGT 57.632 39.130 0.00 0.00 0.00 3.32
328 329 4.703897 TCCACTACTTGAGAAAGGTTGTG 58.296 43.478 0.00 0.00 36.81 3.33
329 330 3.251004 CCACTACTTGAGAAAGGTTGTGC 59.749 47.826 0.00 0.00 36.15 4.57
330 331 3.059597 CACTACTTGAGAAAGGTTGTGCG 60.060 47.826 0.00 0.00 32.41 5.34
331 332 1.308998 ACTTGAGAAAGGTTGTGCGG 58.691 50.000 0.00 0.00 0.00 5.69
332 333 1.134220 ACTTGAGAAAGGTTGTGCGGA 60.134 47.619 0.00 0.00 0.00 5.54
333 334 1.532868 CTTGAGAAAGGTTGTGCGGAG 59.467 52.381 0.00 0.00 0.00 4.63
334 335 0.250295 TGAGAAAGGTTGTGCGGAGG 60.250 55.000 0.00 0.00 0.00 4.30
335 336 0.034896 GAGAAAGGTTGTGCGGAGGA 59.965 55.000 0.00 0.00 0.00 3.71
336 337 0.035458 AGAAAGGTTGTGCGGAGGAG 59.965 55.000 0.00 0.00 0.00 3.69
337 338 0.955919 GAAAGGTTGTGCGGAGGAGG 60.956 60.000 0.00 0.00 0.00 4.30
338 339 1.705997 AAAGGTTGTGCGGAGGAGGT 61.706 55.000 0.00 0.00 0.00 3.85
339 340 2.358737 GGTTGTGCGGAGGAGGTG 60.359 66.667 0.00 0.00 0.00 4.00
340 341 3.050275 GTTGTGCGGAGGAGGTGC 61.050 66.667 0.00 0.00 0.00 5.01
341 342 4.680237 TTGTGCGGAGGAGGTGCG 62.680 66.667 0.00 0.00 44.19 5.34
343 344 3.755628 GTGCGGAGGAGGTGCGTA 61.756 66.667 0.00 0.00 43.07 4.42
344 345 3.755628 TGCGGAGGAGGTGCGTAC 61.756 66.667 0.00 0.00 43.07 3.67
345 346 3.450115 GCGGAGGAGGTGCGTACT 61.450 66.667 3.01 0.00 43.07 2.73
346 347 2.799371 CGGAGGAGGTGCGTACTC 59.201 66.667 3.01 0.00 34.79 2.59
347 348 2.044555 CGGAGGAGGTGCGTACTCA 61.045 63.158 3.01 0.00 36.70 3.41
348 349 1.384989 CGGAGGAGGTGCGTACTCAT 61.385 60.000 3.01 0.00 36.70 2.90
349 350 1.688772 GGAGGAGGTGCGTACTCATA 58.311 55.000 3.01 0.00 36.70 2.15
350 351 2.240279 GGAGGAGGTGCGTACTCATAT 58.760 52.381 3.01 0.00 36.70 1.78
351 352 2.229302 GGAGGAGGTGCGTACTCATATC 59.771 54.545 3.01 0.00 36.70 1.63
352 353 2.229302 GAGGAGGTGCGTACTCATATCC 59.771 54.545 3.01 9.97 36.70 2.59
353 354 2.158445 AGGAGGTGCGTACTCATATCCT 60.158 50.000 13.30 13.30 36.70 3.24
354 355 3.074094 AGGAGGTGCGTACTCATATCCTA 59.926 47.826 16.13 0.00 36.70 2.94
355 356 3.190953 GGAGGTGCGTACTCATATCCTAC 59.809 52.174 3.01 0.99 36.70 3.18
356 357 3.819337 GAGGTGCGTACTCATATCCTACA 59.181 47.826 3.01 0.00 35.09 2.74
357 358 3.568853 AGGTGCGTACTCATATCCTACAC 59.431 47.826 3.01 0.00 0.00 2.90
358 359 3.305199 GGTGCGTACTCATATCCTACACC 60.305 52.174 3.01 0.00 38.38 4.16
359 360 3.317149 GTGCGTACTCATATCCTACACCA 59.683 47.826 0.00 0.00 0.00 4.17
360 361 4.022242 GTGCGTACTCATATCCTACACCAT 60.022 45.833 0.00 0.00 0.00 3.55
361 362 4.022329 TGCGTACTCATATCCTACACCATG 60.022 45.833 0.00 0.00 0.00 3.66
362 363 4.022242 GCGTACTCATATCCTACACCATGT 60.022 45.833 0.00 0.00 0.00 3.21
363 364 5.700846 CGTACTCATATCCTACACCATGTC 58.299 45.833 0.00 0.00 0.00 3.06
364 365 5.240844 CGTACTCATATCCTACACCATGTCA 59.759 44.000 0.00 0.00 0.00 3.58
365 366 6.071896 CGTACTCATATCCTACACCATGTCAT 60.072 42.308 0.00 0.00 0.00 3.06
366 367 6.106648 ACTCATATCCTACACCATGTCATG 57.893 41.667 5.79 5.79 0.00 3.07
367 368 5.604231 ACTCATATCCTACACCATGTCATGT 59.396 40.000 11.84 0.00 0.00 3.21
368 369 6.782494 ACTCATATCCTACACCATGTCATGTA 59.218 38.462 11.84 0.00 0.00 2.29
369 370 7.455953 ACTCATATCCTACACCATGTCATGTAT 59.544 37.037 11.84 0.00 31.10 2.29
370 371 8.893563 TCATATCCTACACCATGTCATGTATA 57.106 34.615 11.84 0.86 31.10 1.47
371 372 8.749354 TCATATCCTACACCATGTCATGTATAC 58.251 37.037 11.84 0.00 31.10 1.47
372 373 5.801531 TCCTACACCATGTCATGTATACC 57.198 43.478 11.84 0.00 31.10 2.73
373 374 5.464069 TCCTACACCATGTCATGTATACCT 58.536 41.667 11.84 0.00 31.10 3.08
374 375 6.616577 TCCTACACCATGTCATGTATACCTA 58.383 40.000 11.84 0.00 31.10 3.08
375 376 7.070629 TCCTACACCATGTCATGTATACCTAA 58.929 38.462 11.84 0.00 31.10 2.69
376 377 7.565768 TCCTACACCATGTCATGTATACCTAAA 59.434 37.037 11.84 0.00 31.10 1.85
377 378 8.375506 CCTACACCATGTCATGTATACCTAAAT 58.624 37.037 11.84 0.00 31.10 1.40
380 381 8.934697 ACACCATGTCATGTATACCTAAATAGT 58.065 33.333 11.84 0.00 0.00 2.12
381 382 9.778741 CACCATGTCATGTATACCTAAATAGTT 57.221 33.333 11.84 0.00 0.00 2.24
411 412 9.289303 CATGTAATTGACTTTTGTAATACAGGC 57.711 33.333 0.00 0.00 0.00 4.85
412 413 8.630054 TGTAATTGACTTTTGTAATACAGGCT 57.370 30.769 0.00 0.00 0.00 4.58
413 414 9.073475 TGTAATTGACTTTTGTAATACAGGCTT 57.927 29.630 0.00 0.00 0.00 4.35
414 415 9.908152 GTAATTGACTTTTGTAATACAGGCTTT 57.092 29.630 0.00 0.00 0.00 3.51
416 417 6.236017 TGACTTTTGTAATACAGGCTTTCG 57.764 37.500 0.00 0.00 0.00 3.46
417 418 5.043189 ACTTTTGTAATACAGGCTTTCGC 57.957 39.130 0.00 0.00 0.00 4.70
430 431 2.061028 GCTTTCGCCTTTTTGACATGG 58.939 47.619 0.00 0.00 0.00 3.66
431 432 2.288152 GCTTTCGCCTTTTTGACATGGA 60.288 45.455 0.00 0.00 0.00 3.41
432 433 3.614870 GCTTTCGCCTTTTTGACATGGAT 60.615 43.478 0.00 0.00 0.00 3.41
433 434 4.380444 GCTTTCGCCTTTTTGACATGGATA 60.380 41.667 0.00 0.00 0.00 2.59
434 435 5.708948 CTTTCGCCTTTTTGACATGGATAA 58.291 37.500 0.00 0.00 0.00 1.75
435 436 4.963276 TCGCCTTTTTGACATGGATAAG 57.037 40.909 0.00 0.00 0.00 1.73
436 437 3.694072 TCGCCTTTTTGACATGGATAAGG 59.306 43.478 0.00 4.52 36.17 2.69
437 438 3.443681 CGCCTTTTTGACATGGATAAGGT 59.556 43.478 0.00 0.00 35.65 3.50
438 439 4.638421 CGCCTTTTTGACATGGATAAGGTA 59.362 41.667 0.00 0.00 35.65 3.08
439 440 5.220854 CGCCTTTTTGACATGGATAAGGTAG 60.221 44.000 0.00 0.00 35.65 3.18
440 441 5.885912 GCCTTTTTGACATGGATAAGGTAGA 59.114 40.000 0.00 0.00 35.65 2.59
441 442 6.038714 GCCTTTTTGACATGGATAAGGTAGAG 59.961 42.308 0.00 0.00 35.65 2.43
442 443 7.338710 CCTTTTTGACATGGATAAGGTAGAGA 58.661 38.462 0.00 0.00 0.00 3.10
443 444 7.995488 CCTTTTTGACATGGATAAGGTAGAGAT 59.005 37.037 0.00 0.00 0.00 2.75
444 445 9.401058 CTTTTTGACATGGATAAGGTAGAGATT 57.599 33.333 0.00 0.00 0.00 2.40
445 446 8.964476 TTTTGACATGGATAAGGTAGAGATTC 57.036 34.615 0.00 0.00 0.00 2.52
446 447 7.921041 TTGACATGGATAAGGTAGAGATTCT 57.079 36.000 0.00 0.00 0.00 2.40
447 448 7.531857 TGACATGGATAAGGTAGAGATTCTC 57.468 40.000 5.49 5.49 0.00 2.87
448 449 7.301420 TGACATGGATAAGGTAGAGATTCTCT 58.699 38.462 19.64 19.64 43.83 3.10
449 450 7.232330 TGACATGGATAAGGTAGAGATTCTCTG 59.768 40.741 23.60 7.78 41.37 3.35
450 451 6.014669 ACATGGATAAGGTAGAGATTCTCTGC 60.015 42.308 23.60 21.73 41.37 4.26
461 462 8.723942 GTAGAGATTCTCTGCCTTTTATTTCA 57.276 34.615 23.60 0.00 41.37 2.69
462 463 9.167311 GTAGAGATTCTCTGCCTTTTATTTCAA 57.833 33.333 23.60 0.00 41.37 2.69
463 464 8.641498 AGAGATTCTCTGCCTTTTATTTCAAA 57.359 30.769 15.41 0.00 39.62 2.69
464 465 9.082313 AGAGATTCTCTGCCTTTTATTTCAAAA 57.918 29.630 15.41 0.00 39.62 2.44
465 466 9.696917 GAGATTCTCTGCCTTTTATTTCAAAAA 57.303 29.630 6.42 0.00 0.00 1.94
517 518 8.252964 ACTTCCTTCGTTTCATATTACTTGAC 57.747 34.615 0.00 0.00 0.00 3.18
518 519 7.876068 ACTTCCTTCGTTTCATATTACTTGACA 59.124 33.333 0.00 0.00 0.00 3.58
519 520 7.591006 TCCTTCGTTTCATATTACTTGACAC 57.409 36.000 0.00 0.00 0.00 3.67
520 521 7.383687 TCCTTCGTTTCATATTACTTGACACT 58.616 34.615 0.00 0.00 0.00 3.55
521 522 8.525316 TCCTTCGTTTCATATTACTTGACACTA 58.475 33.333 0.00 0.00 0.00 2.74
522 523 9.146984 CCTTCGTTTCATATTACTTGACACTAA 57.853 33.333 0.00 0.00 0.00 2.24
568 569 9.988350 AAATTAGCGACAAGTAATATGAAACAG 57.012 29.630 0.00 0.00 0.00 3.16
569 570 8.942338 ATTAGCGACAAGTAATATGAAACAGA 57.058 30.769 0.00 0.00 0.00 3.41
570 571 6.893958 AGCGACAAGTAATATGAAACAGAG 57.106 37.500 0.00 0.00 0.00 3.35
571 572 5.812642 AGCGACAAGTAATATGAAACAGAGG 59.187 40.000 0.00 0.00 0.00 3.69
572 573 5.006746 GCGACAAGTAATATGAAACAGAGGG 59.993 44.000 0.00 0.00 0.00 4.30
573 574 6.338146 CGACAAGTAATATGAAACAGAGGGA 58.662 40.000 0.00 0.00 0.00 4.20
574 575 6.477033 CGACAAGTAATATGAAACAGAGGGAG 59.523 42.308 0.00 0.00 0.00 4.30
575 576 7.259088 ACAAGTAATATGAAACAGAGGGAGT 57.741 36.000 0.00 0.00 0.00 3.85
576 577 8.375493 ACAAGTAATATGAAACAGAGGGAGTA 57.625 34.615 0.00 0.00 0.00 2.59
577 578 8.478877 ACAAGTAATATGAAACAGAGGGAGTAG 58.521 37.037 0.00 0.00 0.00 2.57
578 579 8.478877 CAAGTAATATGAAACAGAGGGAGTAGT 58.521 37.037 0.00 0.00 0.00 2.73
579 580 8.611051 AGTAATATGAAACAGAGGGAGTAGTT 57.389 34.615 0.00 0.00 0.00 2.24
580 581 9.047947 AGTAATATGAAACAGAGGGAGTAGTTT 57.952 33.333 0.00 0.00 36.94 2.66
581 582 9.668497 GTAATATGAAACAGAGGGAGTAGTTTT 57.332 33.333 0.00 0.00 34.62 2.43
603 604 2.871182 TGCTATTCACTCTAGGCACG 57.129 50.000 0.00 0.00 0.00 5.34
607 608 2.231215 ATTCACTCTAGGCACGCATC 57.769 50.000 0.00 0.00 0.00 3.91
619 620 2.325082 ACGCATCGCTCCCAAACAC 61.325 57.895 0.00 0.00 0.00 3.32
629 630 3.010420 GCTCCCAAACACTCTTCCATAC 58.990 50.000 0.00 0.00 0.00 2.39
632 633 3.009033 TCCCAAACACTCTTCCATACAGG 59.991 47.826 0.00 0.00 39.47 4.00
633 634 3.244911 CCCAAACACTCTTCCATACAGGT 60.245 47.826 0.00 0.00 39.02 4.00
640 641 4.163078 CACTCTTCCATACAGGTTGAGGAT 59.837 45.833 0.00 0.00 39.93 3.24
652 653 3.641906 AGGTTGAGGATCCATTAGTACCG 59.358 47.826 15.82 0.00 0.00 4.02
701 702 0.729690 GAGGTTTCTGGAATGCGAGC 59.270 55.000 0.00 0.00 0.00 5.03
715 717 2.286523 CGAGCTGACCCAACCTCCT 61.287 63.158 0.00 0.00 0.00 3.69
723 725 1.278413 GACCCAACCTCCTAAGTCACC 59.722 57.143 0.00 0.00 0.00 4.02
728 730 0.912486 ACCTCCTAAGTCACCCATGC 59.088 55.000 0.00 0.00 0.00 4.06
806 808 2.809601 CCGTCTCTTTCACGCGGG 60.810 66.667 12.47 6.51 38.86 6.13
832 835 2.457366 TCGCACTTTCTTTCTCCTCC 57.543 50.000 0.00 0.00 0.00 4.30
836 839 3.595173 GCACTTTCTTTCTCCTCCTCTC 58.405 50.000 0.00 0.00 0.00 3.20
839 842 2.223803 TTCTTTCTCCTCCTCTCGCT 57.776 50.000 0.00 0.00 0.00 4.93
893 896 1.005215 ACAATTCCCTCCTCCTGCTTG 59.995 52.381 0.00 0.00 0.00 4.01
910 914 2.223572 GCTTGGCATCGTATCCCAAAAG 60.224 50.000 0.00 0.00 38.10 2.27
922 926 5.009210 CGTATCCCAAAAGACCAAGAAACAA 59.991 40.000 0.00 0.00 0.00 2.83
929 933 4.391405 AAGACCAAGAAACAAAGCAAGG 57.609 40.909 0.00 0.00 0.00 3.61
930 934 2.695147 AGACCAAGAAACAAAGCAAGGG 59.305 45.455 0.00 0.00 0.00 3.95
931 935 2.693074 GACCAAGAAACAAAGCAAGGGA 59.307 45.455 0.00 0.00 0.00 4.20
1068 1076 1.464997 GCCAACAAAGAGATGTCGTCC 59.535 52.381 0.00 0.00 31.81 4.79
1122 1135 2.284684 CAGCGTCTCATCAATCTTCTGC 59.715 50.000 0.00 0.00 0.00 4.26
1130 1143 4.179298 TCATCAATCTTCTGCTCTGTTCG 58.821 43.478 0.00 0.00 0.00 3.95
1131 1144 3.667497 TCAATCTTCTGCTCTGTTCGT 57.333 42.857 0.00 0.00 0.00 3.85
1132 1145 3.995199 TCAATCTTCTGCTCTGTTCGTT 58.005 40.909 0.00 0.00 0.00 3.85
1135 1148 4.999751 ATCTTCTGCTCTGTTCGTTTTC 57.000 40.909 0.00 0.00 0.00 2.29
1141 1154 1.136502 GCTCTGTTCGTTTTCTCGCAG 60.137 52.381 0.00 0.00 0.00 5.18
1151 1164 3.063997 CGTTTTCTCGCAGCATATTTCCT 59.936 43.478 0.00 0.00 0.00 3.36
1152 1165 4.437390 CGTTTTCTCGCAGCATATTTCCTT 60.437 41.667 0.00 0.00 0.00 3.36
1153 1166 4.882671 TTTCTCGCAGCATATTTCCTTC 57.117 40.909 0.00 0.00 0.00 3.46
1180 1193 9.301153 GATTATTGTTTGGTCATGGTATTGTTC 57.699 33.333 0.00 0.00 0.00 3.18
1181 1194 4.757799 TGTTTGGTCATGGTATTGTTCG 57.242 40.909 0.00 0.00 0.00 3.95
1182 1195 3.504134 TGTTTGGTCATGGTATTGTTCGG 59.496 43.478 0.00 0.00 0.00 4.30
1183 1196 3.426787 TTGGTCATGGTATTGTTCGGT 57.573 42.857 0.00 0.00 0.00 4.69
1184 1197 3.426787 TGGTCATGGTATTGTTCGGTT 57.573 42.857 0.00 0.00 0.00 4.44
1185 1198 3.340034 TGGTCATGGTATTGTTCGGTTC 58.660 45.455 0.00 0.00 0.00 3.62
1186 1199 3.008594 TGGTCATGGTATTGTTCGGTTCT 59.991 43.478 0.00 0.00 0.00 3.01
1187 1200 3.621715 GGTCATGGTATTGTTCGGTTCTC 59.378 47.826 0.00 0.00 0.00 2.87
1190 1203 2.679450 TGGTATTGTTCGGTTCTCGTG 58.321 47.619 0.00 0.00 40.32 4.35
1193 1206 2.736144 ATTGTTCGGTTCTCGTGCTA 57.264 45.000 0.00 0.00 40.32 3.49
1212 1227 4.785669 CTAGCTAGCATGTTTTCCTTCG 57.214 45.455 18.83 0.00 0.00 3.79
1213 1228 3.059352 AGCTAGCATGTTTTCCTTCGT 57.941 42.857 18.83 0.00 0.00 3.85
1229 1244 3.802685 CCTTCGTGTTTTAGATCGATCCC 59.197 47.826 21.66 5.84 32.54 3.85
1232 1247 2.480759 CGTGTTTTAGATCGATCCCGGT 60.481 50.000 21.66 5.96 36.24 5.28
1257 1327 8.362639 GTTGGATTGGCATGTGATATTAAGATT 58.637 33.333 0.00 0.00 0.00 2.40
1258 1328 7.888424 TGGATTGGCATGTGATATTAAGATTG 58.112 34.615 0.00 0.00 0.00 2.67
1279 1349 6.757897 TTGATTATTCGATGTGCTCCTTTT 57.242 33.333 0.00 0.00 0.00 2.27
1284 1354 0.455633 CGATGTGCTCCTTTTGCTGC 60.456 55.000 0.00 0.00 0.00 5.25
1285 1355 0.886563 GATGTGCTCCTTTTGCTGCT 59.113 50.000 0.00 0.00 0.00 4.24
1286 1356 0.601558 ATGTGCTCCTTTTGCTGCTG 59.398 50.000 0.00 0.00 0.00 4.41
1287 1357 0.466007 TGTGCTCCTTTTGCTGCTGA 60.466 50.000 0.00 0.00 0.00 4.26
1288 1358 0.039708 GTGCTCCTTTTGCTGCTGAC 60.040 55.000 0.00 0.00 0.00 3.51
1289 1359 1.208614 GCTCCTTTTGCTGCTGACG 59.791 57.895 0.00 0.00 0.00 4.35
1290 1360 1.208614 CTCCTTTTGCTGCTGACGC 59.791 57.895 0.00 0.00 0.00 5.19
1291 1361 2.127118 CCTTTTGCTGCTGACGCG 60.127 61.111 3.53 3.53 39.65 6.01
1292 1362 2.606961 CCTTTTGCTGCTGACGCGA 61.607 57.895 15.93 0.00 39.65 5.87
1293 1363 1.499056 CTTTTGCTGCTGACGCGAT 59.501 52.632 15.93 0.00 39.65 4.58
1294 1364 0.519999 CTTTTGCTGCTGACGCGATC 60.520 55.000 15.93 7.50 39.65 3.69
1295 1365 0.950555 TTTTGCTGCTGACGCGATCT 60.951 50.000 15.93 0.00 39.65 2.75
1296 1366 0.950555 TTTGCTGCTGACGCGATCTT 60.951 50.000 15.93 0.00 39.65 2.40
1297 1367 1.354337 TTGCTGCTGACGCGATCTTC 61.354 55.000 15.93 0.00 39.65 2.87
1298 1368 1.518133 GCTGCTGACGCGATCTTCT 60.518 57.895 15.93 0.00 39.65 2.85
1299 1369 1.080995 GCTGCTGACGCGATCTTCTT 61.081 55.000 15.93 0.00 39.65 2.52
1300 1370 0.644331 CTGCTGACGCGATCTTCTTG 59.356 55.000 15.93 0.00 39.65 3.02
1301 1371 0.038251 TGCTGACGCGATCTTCTTGT 60.038 50.000 15.93 0.00 39.65 3.16
1302 1372 0.642800 GCTGACGCGATCTTCTTGTC 59.357 55.000 15.93 0.00 0.00 3.18
1720 1790 1.067821 GAGGCTTACGAGGTCATCAGG 59.932 57.143 0.00 0.00 0.00 3.86
1751 1821 2.746362 ACCGTCGACGAGTTCTAGATTT 59.254 45.455 37.65 7.00 43.02 2.17
1752 1822 3.935203 ACCGTCGACGAGTTCTAGATTTA 59.065 43.478 37.65 0.00 43.02 1.40
1753 1823 4.033817 ACCGTCGACGAGTTCTAGATTTAG 59.966 45.833 37.65 18.06 43.02 1.85
1754 1824 4.269603 CCGTCGACGAGTTCTAGATTTAGA 59.730 45.833 37.65 0.00 43.02 2.10
1756 1826 6.420588 CGTCGACGAGTTCTAGATTTAGATT 58.579 40.000 33.35 0.00 43.02 2.40
1757 1827 6.570789 CGTCGACGAGTTCTAGATTTAGATTC 59.429 42.308 33.35 0.00 43.02 2.52
1758 1828 7.517101 CGTCGACGAGTTCTAGATTTAGATTCT 60.517 40.741 33.35 0.00 43.02 2.40
1759 1829 8.763356 GTCGACGAGTTCTAGATTTAGATTCTA 58.237 37.037 0.00 0.00 35.88 2.10
1760 1830 8.980610 TCGACGAGTTCTAGATTTAGATTCTAG 58.019 37.037 0.00 2.06 42.63 2.43
1761 1831 8.767085 CGACGAGTTCTAGATTTAGATTCTAGT 58.233 37.037 0.00 9.54 42.14 2.57
1814 1885 6.834959 ATAATTGATCACGTGCTTACTCTG 57.165 37.500 11.67 0.00 0.00 3.35
1853 1924 4.405358 GGATGCTTGTAAATGGGGATTCAA 59.595 41.667 0.00 0.00 0.00 2.69
1942 2021 0.388649 ATCGACGTGCACAAGAGGAC 60.389 55.000 18.64 0.00 0.00 3.85
2040 2119 1.344438 CACTAGACCACTGGTGCTTGA 59.656 52.381 5.10 0.00 45.52 3.02
2060 2168 6.525628 GCTTGATGATTATTGATAATGCACCG 59.474 38.462 1.16 0.00 33.37 4.94
2061 2169 5.941733 TGATGATTATTGATAATGCACCGC 58.058 37.500 1.16 0.00 33.37 5.68
2063 2171 6.207221 TGATGATTATTGATAATGCACCGCTT 59.793 34.615 1.16 0.00 33.37 4.68
2078 2186 1.333619 CCGCTTAAATATGCAACCGCT 59.666 47.619 0.00 0.00 39.64 5.52
2143 2252 2.035961 GCAGGAGCGTATGATCAACCTA 59.964 50.000 0.00 0.00 30.14 3.08
2379 2491 3.535561 GCAATCACTAGCCTTGCTCTTA 58.464 45.455 14.10 0.00 41.52 2.10
2380 2492 3.311048 GCAATCACTAGCCTTGCTCTTAC 59.689 47.826 14.10 0.00 41.52 2.34
2383 2495 6.520272 CAATCACTAGCCTTGCTCTTACTAT 58.480 40.000 0.00 0.00 40.44 2.12
2384 2496 7.661968 CAATCACTAGCCTTGCTCTTACTATA 58.338 38.462 0.00 0.00 40.44 1.31
2462 2574 3.319405 ACAATGGAAGCGTAGATCGATCT 59.681 43.478 29.58 29.58 42.86 2.75
2464 2576 2.298610 TGGAAGCGTAGATCGATCTGT 58.701 47.619 33.22 14.55 42.86 3.41
2477 2589 1.978712 GATCTGTCGAGGTCACGCGA 61.979 60.000 15.93 0.00 46.51 5.87
2508 2620 7.015292 ACCAACTTCATAACAACTAGAGAGTCA 59.985 37.037 0.00 0.00 33.58 3.41
2546 2658 2.840651 GAGATTCACTTCCTTGGAGGGA 59.159 50.000 3.86 0.00 35.59 4.20
2553 2665 2.989571 ACTTCCTTGGAGGGACAAAGAT 59.010 45.455 3.86 0.00 35.59 2.40
2561 2673 5.333566 TGGAGGGACAAAGATAAACCTTT 57.666 39.130 0.00 0.00 36.87 3.11
2565 2677 7.116736 GGAGGGACAAAGATAAACCTTTCATA 58.883 38.462 0.00 0.00 34.41 2.15
2574 2686 5.880332 AGATAAACCTTTCATACACGCACAT 59.120 36.000 0.00 0.00 0.00 3.21
2588 2700 3.731216 CACGCACATAATTCCGTCTCTAG 59.269 47.826 0.00 0.00 0.00 2.43
2594 2706 5.861251 CACATAATTCCGTCTCTAGAGCATC 59.139 44.000 15.35 7.05 0.00 3.91
2602 2714 2.427453 GTCTCTAGAGCATCCCGACAAA 59.573 50.000 15.35 0.00 33.66 2.83
2671 2788 7.384115 CCACTTACCATGACTATATTAACCACG 59.616 40.741 0.00 0.00 0.00 4.94
2717 2834 8.480501 ACGACTACAAACATGGTATACCTATTT 58.519 33.333 22.41 15.76 36.82 1.40
2718 2835 9.321562 CGACTACAAACATGGTATACCTATTTT 57.678 33.333 22.41 14.45 36.82 1.82
2743 2860 9.689501 TTTTTCGAAAAGGATGGTATACCTATT 57.310 29.630 22.41 7.78 35.25 1.73
2745 2862 9.768662 TTTCGAAAAGGATGGTATACCTATTAC 57.231 33.333 22.41 8.57 35.25 1.89
2746 2863 8.481492 TCGAAAAGGATGGTATACCTATTACA 57.519 34.615 22.41 1.48 35.25 2.41
2747 2864 8.582437 TCGAAAAGGATGGTATACCTATTACAG 58.418 37.037 22.41 7.11 35.25 2.74
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.660949 GCTTTAGATTAGGCCCATTATCACAT 59.339 38.462 0.00 0.00 0.00 3.21
1 2 6.003950 GCTTTAGATTAGGCCCATTATCACA 58.996 40.000 0.00 0.00 0.00 3.58
2 3 5.416013 GGCTTTAGATTAGGCCCATTATCAC 59.584 44.000 0.00 0.00 38.77 3.06
3 4 5.570320 GGCTTTAGATTAGGCCCATTATCA 58.430 41.667 0.00 0.00 38.77 2.15
12 13 2.647683 AGCTGGGCTTTAGATTAGGC 57.352 50.000 0.00 0.00 33.89 3.93
20 21 8.466465 TAGTACGCAACTTAAGCTGGGCTTTA 62.466 42.308 19.50 8.93 41.93 1.85
21 22 7.764811 TAGTACGCAACTTAAGCTGGGCTTT 62.765 44.000 19.50 9.71 41.93 3.51
22 23 6.369182 TAGTACGCAACTTAAGCTGGGCTT 62.369 45.833 19.50 9.70 44.48 4.35
23 24 0.323629 TACGCAACTTAAGCTGGGCT 59.676 50.000 19.50 11.23 42.56 5.19
24 25 0.446616 GTACGCAACTTAAGCTGGGC 59.553 55.000 19.50 9.73 0.00 5.36
25 26 2.094762 AGTACGCAACTTAAGCTGGG 57.905 50.000 18.35 18.35 33.35 4.45
26 27 5.796350 AAATAGTACGCAACTTAAGCTGG 57.204 39.130 7.93 1.29 39.80 4.85
27 28 7.063074 ACAGTAAATAGTACGCAACTTAAGCTG 59.937 37.037 1.29 1.30 39.80 4.24
28 29 7.095270 ACAGTAAATAGTACGCAACTTAAGCT 58.905 34.615 1.29 0.00 39.80 3.74
29 30 7.287050 ACAGTAAATAGTACGCAACTTAAGC 57.713 36.000 1.29 0.00 39.80 3.09
30 31 7.482743 TCGACAGTAAATAGTACGCAACTTAAG 59.517 37.037 0.00 0.00 39.80 1.85
31 32 7.304735 TCGACAGTAAATAGTACGCAACTTAA 58.695 34.615 0.00 0.00 39.80 1.85
32 33 6.841119 TCGACAGTAAATAGTACGCAACTTA 58.159 36.000 0.00 0.00 39.80 2.24
33 34 5.702865 TCGACAGTAAATAGTACGCAACTT 58.297 37.500 0.00 0.00 39.80 2.66
34 35 5.300969 TCGACAGTAAATAGTACGCAACT 57.699 39.130 0.00 0.00 42.62 3.16
35 36 5.997732 TTCGACAGTAAATAGTACGCAAC 57.002 39.130 0.00 0.00 0.00 4.17
36 37 7.116662 ACAAATTCGACAGTAAATAGTACGCAA 59.883 33.333 0.00 0.00 0.00 4.85
37 38 6.587226 ACAAATTCGACAGTAAATAGTACGCA 59.413 34.615 0.00 0.00 0.00 5.24
38 39 6.986118 ACAAATTCGACAGTAAATAGTACGC 58.014 36.000 0.00 0.00 0.00 4.42
39 40 8.165212 TGACAAATTCGACAGTAAATAGTACG 57.835 34.615 0.00 0.00 0.00 3.67
48 49 9.820229 GAAACATAAATGACAAATTCGACAGTA 57.180 29.630 0.00 0.00 0.00 2.74
49 50 8.567948 AGAAACATAAATGACAAATTCGACAGT 58.432 29.630 0.00 0.00 0.00 3.55
50 51 8.955061 AGAAACATAAATGACAAATTCGACAG 57.045 30.769 0.00 0.00 0.00 3.51
51 52 8.563732 TGAGAAACATAAATGACAAATTCGACA 58.436 29.630 0.00 0.00 0.00 4.35
52 53 8.948853 TGAGAAACATAAATGACAAATTCGAC 57.051 30.769 0.00 0.00 0.00 4.20
53 54 9.611284 CTTGAGAAACATAAATGACAAATTCGA 57.389 29.630 0.00 0.00 0.00 3.71
54 55 8.368126 GCTTGAGAAACATAAATGACAAATTCG 58.632 33.333 0.00 0.00 0.00 3.34
55 56 9.415544 AGCTTGAGAAACATAAATGACAAATTC 57.584 29.630 0.00 0.00 0.00 2.17
58 59 9.844790 CATAGCTTGAGAAACATAAATGACAAA 57.155 29.630 0.00 0.00 0.00 2.83
59 60 9.013229 ACATAGCTTGAGAAACATAAATGACAA 57.987 29.630 0.00 0.00 0.00 3.18
60 61 8.565896 ACATAGCTTGAGAAACATAAATGACA 57.434 30.769 0.00 0.00 0.00 3.58
61 62 9.846248 AAACATAGCTTGAGAAACATAAATGAC 57.154 29.630 0.00 0.00 0.00 3.06
68 69 9.768662 AAATTCAAAACATAGCTTGAGAAACAT 57.231 25.926 0.00 0.00 33.30 2.71
69 70 9.598517 AAAATTCAAAACATAGCTTGAGAAACA 57.401 25.926 0.00 0.00 33.30 2.83
70 71 9.853921 CAAAATTCAAAACATAGCTTGAGAAAC 57.146 29.630 0.00 0.00 33.30 2.78
71 72 9.814899 TCAAAATTCAAAACATAGCTTGAGAAA 57.185 25.926 0.00 0.00 33.30 2.52
72 73 9.985730 ATCAAAATTCAAAACATAGCTTGAGAA 57.014 25.926 0.00 0.00 33.30 2.87
106 107 7.253917 CGCAACATCAAAGTATGTTGTCAAAAA 60.254 33.333 23.28 0.00 42.01 1.94
107 108 6.198029 CGCAACATCAAAGTATGTTGTCAAAA 59.802 34.615 23.28 0.00 42.01 2.44
108 109 5.685068 CGCAACATCAAAGTATGTTGTCAAA 59.315 36.000 23.28 0.00 42.01 2.69
109 110 5.211454 CGCAACATCAAAGTATGTTGTCAA 58.789 37.500 23.28 0.00 42.01 3.18
110 111 4.274705 ACGCAACATCAAAGTATGTTGTCA 59.725 37.500 23.28 0.00 42.01 3.58
111 112 4.783242 ACGCAACATCAAAGTATGTTGTC 58.217 39.130 23.28 16.78 42.01 3.18
112 113 4.274705 TGACGCAACATCAAAGTATGTTGT 59.725 37.500 23.28 10.57 42.01 3.32
113 114 4.782156 TGACGCAACATCAAAGTATGTTG 58.218 39.130 20.12 20.12 42.01 3.33
114 115 5.431420 TTGACGCAACATCAAAGTATGTT 57.569 34.783 0.00 0.00 42.01 2.71
115 116 5.048782 ACATTGACGCAACATCAAAGTATGT 60.049 36.000 0.00 0.00 41.87 2.29
116 117 5.284424 CACATTGACGCAACATCAAAGTATG 59.716 40.000 0.00 0.00 39.43 2.39
117 118 5.393124 CACATTGACGCAACATCAAAGTAT 58.607 37.500 0.00 0.00 39.43 2.12
118 119 4.782156 CACATTGACGCAACATCAAAGTA 58.218 39.130 0.00 0.00 39.43 2.24
119 120 3.631144 CACATTGACGCAACATCAAAGT 58.369 40.909 0.00 0.00 39.43 2.66
120 121 2.406024 GCACATTGACGCAACATCAAAG 59.594 45.455 0.00 0.00 39.43 2.77
121 122 2.034432 AGCACATTGACGCAACATCAAA 59.966 40.909 5.80 0.00 39.43 2.69
122 123 1.608109 AGCACATTGACGCAACATCAA 59.392 42.857 5.80 0.00 40.25 2.57
123 124 1.069091 CAGCACATTGACGCAACATCA 60.069 47.619 5.80 0.00 0.00 3.07
124 125 1.609932 CAGCACATTGACGCAACATC 58.390 50.000 5.80 0.00 0.00 3.06
125 126 0.241749 CCAGCACATTGACGCAACAT 59.758 50.000 5.80 0.00 0.00 2.71
126 127 0.817229 TCCAGCACATTGACGCAACA 60.817 50.000 5.80 0.00 0.00 3.33
127 128 0.523072 ATCCAGCACATTGACGCAAC 59.477 50.000 5.80 0.00 0.00 4.17
128 129 1.246649 AATCCAGCACATTGACGCAA 58.753 45.000 5.80 0.00 0.00 4.85
129 130 1.246649 AAATCCAGCACATTGACGCA 58.753 45.000 5.80 0.00 0.00 5.24
130 131 2.352503 AAAATCCAGCACATTGACGC 57.647 45.000 0.00 0.00 0.00 5.19
170 171 8.299570 CCAAAACTCTGTAGCACATTTCTAAAT 58.700 33.333 0.00 0.00 0.00 1.40
171 172 7.500892 TCCAAAACTCTGTAGCACATTTCTAAA 59.499 33.333 0.00 0.00 0.00 1.85
172 173 6.995686 TCCAAAACTCTGTAGCACATTTCTAA 59.004 34.615 0.00 0.00 0.00 2.10
173 174 6.530120 TCCAAAACTCTGTAGCACATTTCTA 58.470 36.000 0.00 0.00 0.00 2.10
174 175 5.376625 TCCAAAACTCTGTAGCACATTTCT 58.623 37.500 0.00 0.00 0.00 2.52
175 176 5.689383 TCCAAAACTCTGTAGCACATTTC 57.311 39.130 0.00 0.00 0.00 2.17
176 177 4.022849 GCTCCAAAACTCTGTAGCACATTT 60.023 41.667 0.00 0.00 0.00 2.32
177 178 3.503748 GCTCCAAAACTCTGTAGCACATT 59.496 43.478 0.00 0.00 0.00 2.71
178 179 3.077359 GCTCCAAAACTCTGTAGCACAT 58.923 45.455 0.00 0.00 0.00 3.21
179 180 2.158827 TGCTCCAAAACTCTGTAGCACA 60.159 45.455 0.00 0.00 35.20 4.57
180 181 2.494059 TGCTCCAAAACTCTGTAGCAC 58.506 47.619 0.00 0.00 35.20 4.40
181 182 2.104792 AGTGCTCCAAAACTCTGTAGCA 59.895 45.455 0.00 0.00 37.62 3.49
182 183 2.772287 AGTGCTCCAAAACTCTGTAGC 58.228 47.619 0.00 0.00 0.00 3.58
183 184 4.220821 TCCTAGTGCTCCAAAACTCTGTAG 59.779 45.833 0.00 0.00 0.00 2.74
184 185 4.157246 TCCTAGTGCTCCAAAACTCTGTA 58.843 43.478 0.00 0.00 0.00 2.74
185 186 2.972713 TCCTAGTGCTCCAAAACTCTGT 59.027 45.455 0.00 0.00 0.00 3.41
186 187 3.594134 CTCCTAGTGCTCCAAAACTCTG 58.406 50.000 0.00 0.00 0.00 3.35
187 188 2.027653 GCTCCTAGTGCTCCAAAACTCT 60.028 50.000 0.00 0.00 0.00 3.24
188 189 2.289694 TGCTCCTAGTGCTCCAAAACTC 60.290 50.000 6.54 0.00 0.00 3.01
189 190 1.699634 TGCTCCTAGTGCTCCAAAACT 59.300 47.619 6.54 0.00 0.00 2.66
190 191 1.807142 GTGCTCCTAGTGCTCCAAAAC 59.193 52.381 6.54 0.00 0.00 2.43
191 192 1.271379 GGTGCTCCTAGTGCTCCAAAA 60.271 52.381 16.32 0.00 41.91 2.44
192 193 0.324943 GGTGCTCCTAGTGCTCCAAA 59.675 55.000 16.32 0.00 41.91 3.28
193 194 1.553690 GGGTGCTCCTAGTGCTCCAA 61.554 60.000 20.28 0.00 43.49 3.53
194 195 1.990060 GGGTGCTCCTAGTGCTCCA 60.990 63.158 20.28 0.00 43.49 3.86
195 196 0.397254 TAGGGTGCTCCTAGTGCTCC 60.397 60.000 14.11 14.11 45.98 4.70
196 197 3.209091 TAGGGTGCTCCTAGTGCTC 57.791 57.895 4.53 3.33 45.98 4.26
211 212 0.398664 CTGGTACTCCCACCCCTAGG 60.399 65.000 0.06 0.06 38.72 3.02
212 213 0.635009 TCTGGTACTCCCACCCCTAG 59.365 60.000 0.00 0.00 38.72 3.02
213 214 1.326055 ATCTGGTACTCCCACCCCTA 58.674 55.000 0.00 0.00 38.72 3.53
214 215 1.326055 TATCTGGTACTCCCACCCCT 58.674 55.000 0.00 0.00 38.72 4.79
215 216 2.417719 ATATCTGGTACTCCCACCCC 57.582 55.000 0.00 0.00 38.72 4.95
216 217 4.445879 GGAAAATATCTGGTACTCCCACCC 60.446 50.000 0.00 0.00 38.72 4.61
217 218 4.445879 GGGAAAATATCTGGTACTCCCACC 60.446 50.000 6.24 0.00 38.72 4.61
218 219 4.715713 GGGAAAATATCTGGTACTCCCAC 58.284 47.826 6.24 0.00 38.72 4.61
219 220 3.389983 CGGGAAAATATCTGGTACTCCCA 59.610 47.826 10.62 0.00 42.51 4.37
220 221 3.644738 TCGGGAAAATATCTGGTACTCCC 59.355 47.826 1.78 1.78 0.00 4.30
221 222 4.950205 TCGGGAAAATATCTGGTACTCC 57.050 45.455 0.00 0.00 0.00 3.85
222 223 5.855045 ACATCGGGAAAATATCTGGTACTC 58.145 41.667 0.00 0.00 0.00 2.59
223 224 5.888982 ACATCGGGAAAATATCTGGTACT 57.111 39.130 0.00 0.00 0.00 2.73
224 225 5.277828 GCAACATCGGGAAAATATCTGGTAC 60.278 44.000 0.00 0.00 0.00 3.34
225 226 4.819630 GCAACATCGGGAAAATATCTGGTA 59.180 41.667 0.00 0.00 0.00 3.25
226 227 3.632145 GCAACATCGGGAAAATATCTGGT 59.368 43.478 0.00 0.00 0.00 4.00
227 228 3.631686 TGCAACATCGGGAAAATATCTGG 59.368 43.478 0.00 0.00 0.00 3.86
228 229 4.790766 GCTGCAACATCGGGAAAATATCTG 60.791 45.833 0.00 0.00 0.00 2.90
229 230 3.316308 GCTGCAACATCGGGAAAATATCT 59.684 43.478 0.00 0.00 0.00 1.98
230 231 3.316308 AGCTGCAACATCGGGAAAATATC 59.684 43.478 1.02 0.00 0.00 1.63
231 232 3.290710 AGCTGCAACATCGGGAAAATAT 58.709 40.909 1.02 0.00 0.00 1.28
232 233 2.722094 AGCTGCAACATCGGGAAAATA 58.278 42.857 1.02 0.00 0.00 1.40
233 234 1.549203 AGCTGCAACATCGGGAAAAT 58.451 45.000 1.02 0.00 0.00 1.82
234 235 2.083774 CTAGCTGCAACATCGGGAAAA 58.916 47.619 1.02 0.00 0.00 2.29
235 236 1.737838 CTAGCTGCAACATCGGGAAA 58.262 50.000 1.02 0.00 0.00 3.13
236 237 0.744414 GCTAGCTGCAACATCGGGAA 60.744 55.000 7.70 0.00 42.31 3.97
237 238 1.153369 GCTAGCTGCAACATCGGGA 60.153 57.895 7.70 0.00 42.31 5.14
238 239 3.414272 GCTAGCTGCAACATCGGG 58.586 61.111 7.70 0.00 42.31 5.14
247 248 3.547613 GCTTGACATTACATGCTAGCTGC 60.548 47.826 17.23 0.00 43.25 5.25
248 249 3.875727 AGCTTGACATTACATGCTAGCTG 59.124 43.478 17.23 13.70 45.04 4.24
249 250 4.148128 AGCTTGACATTACATGCTAGCT 57.852 40.909 17.23 0.00 45.04 3.32
250 251 4.889832 AAGCTTGACATTACATGCTAGC 57.110 40.909 8.10 8.10 45.74 3.42
251 252 6.032094 CCAAAAGCTTGACATTACATGCTAG 58.968 40.000 0.00 0.00 45.74 3.42
252 253 5.622007 GCCAAAAGCTTGACATTACATGCTA 60.622 40.000 0.00 0.00 45.74 3.49
254 255 3.368843 GCCAAAAGCTTGACATTACATGC 59.631 43.478 0.00 0.00 39.92 4.06
255 256 3.609373 CGCCAAAAGCTTGACATTACATG 59.391 43.478 0.00 0.00 40.39 3.21
256 257 3.505680 TCGCCAAAAGCTTGACATTACAT 59.494 39.130 0.00 0.00 40.39 2.29
257 258 2.881513 TCGCCAAAAGCTTGACATTACA 59.118 40.909 0.00 0.00 40.39 2.41
258 259 3.188460 TCTCGCCAAAAGCTTGACATTAC 59.812 43.478 0.00 0.00 40.39 1.89
259 260 3.407698 TCTCGCCAAAAGCTTGACATTA 58.592 40.909 0.00 0.00 40.39 1.90
260 261 2.227388 CTCTCGCCAAAAGCTTGACATT 59.773 45.455 0.00 0.00 40.39 2.71
261 262 1.808945 CTCTCGCCAAAAGCTTGACAT 59.191 47.619 0.00 0.00 40.39 3.06
262 263 1.202639 TCTCTCGCCAAAAGCTTGACA 60.203 47.619 0.00 0.00 40.39 3.58
263 264 1.462670 CTCTCTCGCCAAAAGCTTGAC 59.537 52.381 0.00 0.00 40.39 3.18
264 265 1.070758 ACTCTCTCGCCAAAAGCTTGA 59.929 47.619 0.00 0.00 40.39 3.02
265 266 1.517242 ACTCTCTCGCCAAAAGCTTG 58.483 50.000 0.00 0.00 40.39 4.01
266 267 2.262423 AACTCTCTCGCCAAAAGCTT 57.738 45.000 0.00 0.00 40.39 3.74
267 268 3.402628 TTAACTCTCTCGCCAAAAGCT 57.597 42.857 0.00 0.00 40.39 3.74
268 269 5.277538 CCATATTAACTCTCTCGCCAAAAGC 60.278 44.000 0.00 0.00 38.52 3.51
269 270 6.049149 TCCATATTAACTCTCTCGCCAAAAG 58.951 40.000 0.00 0.00 0.00 2.27
270 271 5.984725 TCCATATTAACTCTCTCGCCAAAA 58.015 37.500 0.00 0.00 0.00 2.44
271 272 5.607939 TCCATATTAACTCTCTCGCCAAA 57.392 39.130 0.00 0.00 0.00 3.28
272 273 5.808366 ATCCATATTAACTCTCTCGCCAA 57.192 39.130 0.00 0.00 0.00 4.52
273 274 6.911250 TTATCCATATTAACTCTCTCGCCA 57.089 37.500 0.00 0.00 0.00 5.69
274 275 8.254508 AGATTTATCCATATTAACTCTCTCGCC 58.745 37.037 0.00 0.00 0.00 5.54
275 276 9.646427 AAGATTTATCCATATTAACTCTCTCGC 57.354 33.333 0.00 0.00 0.00 5.03
296 297 9.883142 CTTTCTCAAGTAGTGGAATAGAAGATT 57.117 33.333 0.00 0.00 0.00 2.40
297 298 8.482128 CCTTTCTCAAGTAGTGGAATAGAAGAT 58.518 37.037 0.00 0.00 0.00 2.40
298 299 7.455008 ACCTTTCTCAAGTAGTGGAATAGAAGA 59.545 37.037 0.00 0.00 0.00 2.87
299 300 7.616313 ACCTTTCTCAAGTAGTGGAATAGAAG 58.384 38.462 0.00 0.00 0.00 2.85
300 301 7.554959 ACCTTTCTCAAGTAGTGGAATAGAA 57.445 36.000 0.00 0.00 0.00 2.10
301 302 7.016268 ACAACCTTTCTCAAGTAGTGGAATAGA 59.984 37.037 0.00 0.00 0.00 1.98
302 303 7.118390 CACAACCTTTCTCAAGTAGTGGAATAG 59.882 40.741 0.00 0.00 0.00 1.73
303 304 6.934645 CACAACCTTTCTCAAGTAGTGGAATA 59.065 38.462 0.00 0.00 0.00 1.75
304 305 5.765182 CACAACCTTTCTCAAGTAGTGGAAT 59.235 40.000 0.00 0.00 0.00 3.01
305 306 5.123227 CACAACCTTTCTCAAGTAGTGGAA 58.877 41.667 0.00 0.00 0.00 3.53
306 307 4.703897 CACAACCTTTCTCAAGTAGTGGA 58.296 43.478 0.00 0.00 0.00 4.02
307 308 3.251004 GCACAACCTTTCTCAAGTAGTGG 59.749 47.826 0.00 0.00 30.57 4.00
308 309 3.059597 CGCACAACCTTTCTCAAGTAGTG 60.060 47.826 0.00 0.00 31.92 2.74
309 310 3.131396 CGCACAACCTTTCTCAAGTAGT 58.869 45.455 0.00 0.00 0.00 2.73
310 311 2.480419 CCGCACAACCTTTCTCAAGTAG 59.520 50.000 0.00 0.00 0.00 2.57
311 312 2.103432 TCCGCACAACCTTTCTCAAGTA 59.897 45.455 0.00 0.00 0.00 2.24
312 313 1.134220 TCCGCACAACCTTTCTCAAGT 60.134 47.619 0.00 0.00 0.00 3.16
313 314 1.532868 CTCCGCACAACCTTTCTCAAG 59.467 52.381 0.00 0.00 0.00 3.02
314 315 1.593196 CTCCGCACAACCTTTCTCAA 58.407 50.000 0.00 0.00 0.00 3.02
315 316 0.250295 CCTCCGCACAACCTTTCTCA 60.250 55.000 0.00 0.00 0.00 3.27
316 317 0.034896 TCCTCCGCACAACCTTTCTC 59.965 55.000 0.00 0.00 0.00 2.87
317 318 0.035458 CTCCTCCGCACAACCTTTCT 59.965 55.000 0.00 0.00 0.00 2.52
318 319 0.955919 CCTCCTCCGCACAACCTTTC 60.956 60.000 0.00 0.00 0.00 2.62
319 320 1.073199 CCTCCTCCGCACAACCTTT 59.927 57.895 0.00 0.00 0.00 3.11
320 321 2.147387 ACCTCCTCCGCACAACCTT 61.147 57.895 0.00 0.00 0.00 3.50
321 322 2.526873 ACCTCCTCCGCACAACCT 60.527 61.111 0.00 0.00 0.00 3.50
322 323 2.358737 CACCTCCTCCGCACAACC 60.359 66.667 0.00 0.00 0.00 3.77
323 324 3.050275 GCACCTCCTCCGCACAAC 61.050 66.667 0.00 0.00 0.00 3.32
324 325 4.680237 CGCACCTCCTCCGCACAA 62.680 66.667 0.00 0.00 0.00 3.33
326 327 3.755628 TACGCACCTCCTCCGCAC 61.756 66.667 0.00 0.00 0.00 5.34
327 328 3.755628 GTACGCACCTCCTCCGCA 61.756 66.667 0.00 0.00 0.00 5.69
328 329 3.412879 GAGTACGCACCTCCTCCGC 62.413 68.421 0.00 0.00 0.00 5.54
329 330 1.384989 ATGAGTACGCACCTCCTCCG 61.385 60.000 0.00 0.00 0.00 4.63
330 331 1.688772 TATGAGTACGCACCTCCTCC 58.311 55.000 0.00 0.00 0.00 4.30
331 332 2.229302 GGATATGAGTACGCACCTCCTC 59.771 54.545 17.07 5.17 0.00 3.71
332 333 2.158445 AGGATATGAGTACGCACCTCCT 60.158 50.000 19.76 19.76 30.97 3.69
333 334 2.240279 AGGATATGAGTACGCACCTCC 58.760 52.381 16.78 16.78 0.00 4.30
334 335 3.819337 TGTAGGATATGAGTACGCACCTC 59.181 47.826 9.97 6.20 0.00 3.85
335 336 3.568853 GTGTAGGATATGAGTACGCACCT 59.431 47.826 11.16 11.16 0.00 4.00
336 337 3.305199 GGTGTAGGATATGAGTACGCACC 60.305 52.174 0.00 0.00 37.33 5.01
337 338 3.317149 TGGTGTAGGATATGAGTACGCAC 59.683 47.826 0.00 0.00 0.00 5.34
338 339 3.558033 TGGTGTAGGATATGAGTACGCA 58.442 45.455 0.51 0.51 0.00 5.24
339 340 4.022242 ACATGGTGTAGGATATGAGTACGC 60.022 45.833 0.00 0.00 0.00 4.42
340 341 5.240844 TGACATGGTGTAGGATATGAGTACG 59.759 44.000 0.00 0.00 0.00 3.67
341 342 6.650427 TGACATGGTGTAGGATATGAGTAC 57.350 41.667 0.00 0.00 0.00 2.73
342 343 6.782494 ACATGACATGGTGTAGGATATGAGTA 59.218 38.462 19.39 0.00 33.60 2.59
343 344 5.604231 ACATGACATGGTGTAGGATATGAGT 59.396 40.000 19.39 0.00 33.60 3.41
344 345 6.106648 ACATGACATGGTGTAGGATATGAG 57.893 41.667 19.39 0.00 33.60 2.90
345 346 7.797121 ATACATGACATGGTGTAGGATATGA 57.203 36.000 19.39 0.00 34.60 2.15
346 347 7.981789 GGTATACATGACATGGTGTAGGATATG 59.018 40.741 19.39 0.00 34.60 1.78
347 348 7.901322 AGGTATACATGACATGGTGTAGGATAT 59.099 37.037 19.39 7.97 34.60 1.63
348 349 7.246027 AGGTATACATGACATGGTGTAGGATA 58.754 38.462 19.39 0.94 34.60 2.59
349 350 6.084738 AGGTATACATGACATGGTGTAGGAT 58.915 40.000 19.39 0.00 34.60 3.24
350 351 5.464069 AGGTATACATGACATGGTGTAGGA 58.536 41.667 19.39 0.00 34.60 2.94
351 352 5.808366 AGGTATACATGACATGGTGTAGG 57.192 43.478 19.39 0.00 34.60 3.18
354 355 8.934697 ACTATTTAGGTATACATGACATGGTGT 58.065 33.333 19.39 2.93 33.60 4.16
355 356 9.778741 AACTATTTAGGTATACATGACATGGTG 57.221 33.333 19.39 0.00 33.60 4.17
385 386 9.289303 GCCTGTATTACAAAAGTCAATTACATG 57.711 33.333 0.00 0.00 0.00 3.21
386 387 9.243105 AGCCTGTATTACAAAAGTCAATTACAT 57.757 29.630 0.00 0.00 0.00 2.29
387 388 8.630054 AGCCTGTATTACAAAAGTCAATTACA 57.370 30.769 0.00 0.00 0.00 2.41
388 389 9.908152 AAAGCCTGTATTACAAAAGTCAATTAC 57.092 29.630 0.00 0.00 0.00 1.89
390 391 7.807907 CGAAAGCCTGTATTACAAAAGTCAATT 59.192 33.333 0.00 0.00 0.00 2.32
391 392 7.305474 CGAAAGCCTGTATTACAAAAGTCAAT 58.695 34.615 0.00 0.00 0.00 2.57
392 393 6.664515 CGAAAGCCTGTATTACAAAAGTCAA 58.335 36.000 0.00 0.00 0.00 3.18
393 394 6.236017 CGAAAGCCTGTATTACAAAAGTCA 57.764 37.500 0.00 0.00 0.00 3.41
411 412 3.641437 TCCATGTCAAAAAGGCGAAAG 57.359 42.857 0.00 0.00 0.00 2.62
412 413 5.336372 CCTTATCCATGTCAAAAAGGCGAAA 60.336 40.000 0.00 0.00 0.00 3.46
413 414 4.157656 CCTTATCCATGTCAAAAAGGCGAA 59.842 41.667 0.00 0.00 0.00 4.70
414 415 3.694072 CCTTATCCATGTCAAAAAGGCGA 59.306 43.478 0.00 0.00 0.00 5.54
415 416 3.443681 ACCTTATCCATGTCAAAAAGGCG 59.556 43.478 8.60 0.00 37.58 5.52
416 417 5.885912 TCTACCTTATCCATGTCAAAAAGGC 59.114 40.000 8.60 0.00 37.58 4.35
417 418 7.338710 TCTCTACCTTATCCATGTCAAAAAGG 58.661 38.462 0.00 0.00 39.50 3.11
418 419 8.970859 ATCTCTACCTTATCCATGTCAAAAAG 57.029 34.615 0.00 0.00 0.00 2.27
419 420 9.396022 GAATCTCTACCTTATCCATGTCAAAAA 57.604 33.333 0.00 0.00 0.00 1.94
420 421 8.772250 AGAATCTCTACCTTATCCATGTCAAAA 58.228 33.333 0.00 0.00 0.00 2.44
421 422 8.324191 AGAATCTCTACCTTATCCATGTCAAA 57.676 34.615 0.00 0.00 0.00 2.69
422 423 7.921041 AGAATCTCTACCTTATCCATGTCAA 57.079 36.000 0.00 0.00 0.00 3.18
423 424 7.531857 GAGAATCTCTACCTTATCCATGTCA 57.468 40.000 2.45 0.00 0.00 3.58
491 492 9.362539 GTCAAGTAATATGAAACGAAGGAAGTA 57.637 33.333 0.00 0.00 0.00 2.24
492 493 7.876068 TGTCAAGTAATATGAAACGAAGGAAGT 59.124 33.333 0.00 0.00 0.00 3.01
493 494 8.169268 GTGTCAAGTAATATGAAACGAAGGAAG 58.831 37.037 0.00 0.00 0.00 3.46
494 495 7.876068 AGTGTCAAGTAATATGAAACGAAGGAA 59.124 33.333 0.00 0.00 39.53 3.36
495 496 7.383687 AGTGTCAAGTAATATGAAACGAAGGA 58.616 34.615 0.00 0.00 39.53 3.36
496 497 7.596749 AGTGTCAAGTAATATGAAACGAAGG 57.403 36.000 0.00 0.00 39.53 3.46
542 543 9.988350 CTGTTTCATATTACTTGTCGCTAATTT 57.012 29.630 0.00 0.00 0.00 1.82
543 544 9.378551 TCTGTTTCATATTACTTGTCGCTAATT 57.621 29.630 0.00 0.00 0.00 1.40
544 545 8.942338 TCTGTTTCATATTACTTGTCGCTAAT 57.058 30.769 0.00 0.00 0.00 1.73
545 546 7.491372 CCTCTGTTTCATATTACTTGTCGCTAA 59.509 37.037 0.00 0.00 0.00 3.09
546 547 6.978659 CCTCTGTTTCATATTACTTGTCGCTA 59.021 38.462 0.00 0.00 0.00 4.26
547 548 5.812642 CCTCTGTTTCATATTACTTGTCGCT 59.187 40.000 0.00 0.00 0.00 4.93
548 549 5.006746 CCCTCTGTTTCATATTACTTGTCGC 59.993 44.000 0.00 0.00 0.00 5.19
549 550 6.338146 TCCCTCTGTTTCATATTACTTGTCG 58.662 40.000 0.00 0.00 0.00 4.35
550 551 7.331791 ACTCCCTCTGTTTCATATTACTTGTC 58.668 38.462 0.00 0.00 0.00 3.18
551 552 7.259088 ACTCCCTCTGTTTCATATTACTTGT 57.741 36.000 0.00 0.00 0.00 3.16
552 553 8.478877 ACTACTCCCTCTGTTTCATATTACTTG 58.521 37.037 0.00 0.00 0.00 3.16
553 554 8.611051 ACTACTCCCTCTGTTTCATATTACTT 57.389 34.615 0.00 0.00 0.00 2.24
554 555 8.611051 AACTACTCCCTCTGTTTCATATTACT 57.389 34.615 0.00 0.00 0.00 2.24
555 556 9.668497 AAAACTACTCCCTCTGTTTCATATTAC 57.332 33.333 0.00 0.00 32.35 1.89
580 581 4.391830 CGTGCCTAGAGTGAATAGCAAAAA 59.608 41.667 0.00 0.00 0.00 1.94
581 582 3.932710 CGTGCCTAGAGTGAATAGCAAAA 59.067 43.478 0.00 0.00 0.00 2.44
582 583 3.521560 CGTGCCTAGAGTGAATAGCAAA 58.478 45.455 0.00 0.00 0.00 3.68
583 584 2.738643 GCGTGCCTAGAGTGAATAGCAA 60.739 50.000 0.00 0.00 0.00 3.91
584 585 1.202417 GCGTGCCTAGAGTGAATAGCA 60.202 52.381 0.00 0.00 0.00 3.49
585 586 1.202417 TGCGTGCCTAGAGTGAATAGC 60.202 52.381 0.00 0.00 0.00 2.97
586 587 2.871182 TGCGTGCCTAGAGTGAATAG 57.129 50.000 0.00 0.00 0.00 1.73
587 588 2.287608 CGATGCGTGCCTAGAGTGAATA 60.288 50.000 0.00 0.00 0.00 1.75
588 589 1.536922 CGATGCGTGCCTAGAGTGAAT 60.537 52.381 0.00 0.00 0.00 2.57
589 590 0.179137 CGATGCGTGCCTAGAGTGAA 60.179 55.000 0.00 0.00 0.00 3.18
590 591 1.433471 CGATGCGTGCCTAGAGTGA 59.567 57.895 0.00 0.00 0.00 3.41
591 592 2.233654 GCGATGCGTGCCTAGAGTG 61.234 63.158 0.00 0.00 0.00 3.51
592 593 2.105128 GCGATGCGTGCCTAGAGT 59.895 61.111 0.00 0.00 0.00 3.24
593 594 1.659954 GAGCGATGCGTGCCTAGAG 60.660 63.158 0.00 0.00 0.00 2.43
594 595 2.413351 GAGCGATGCGTGCCTAGA 59.587 61.111 0.00 0.00 0.00 2.43
595 596 2.659897 GGAGCGATGCGTGCCTAG 60.660 66.667 0.00 0.00 0.00 3.02
596 597 4.221422 GGGAGCGATGCGTGCCTA 62.221 66.667 0.00 0.00 0.00 3.93
599 600 3.430862 TTTGGGAGCGATGCGTGC 61.431 61.111 0.00 0.00 0.00 5.34
603 604 0.674895 AGAGTGTTTGGGAGCGATGC 60.675 55.000 0.00 0.00 0.00 3.91
607 608 0.250295 TGGAAGAGTGTTTGGGAGCG 60.250 55.000 0.00 0.00 0.00 5.03
619 620 4.202305 GGATCCTCAACCTGTATGGAAGAG 60.202 50.000 3.84 0.00 38.77 2.85
629 630 4.501571 CGGTACTAATGGATCCTCAACCTG 60.502 50.000 14.23 5.38 0.00 4.00
632 633 3.181469 TGCGGTACTAATGGATCCTCAAC 60.181 47.826 14.23 2.81 0.00 3.18
633 634 3.035363 TGCGGTACTAATGGATCCTCAA 58.965 45.455 14.23 0.00 0.00 3.02
640 641 3.491276 CGGTTGTATGCGGTACTAATGGA 60.491 47.826 0.00 0.00 34.27 3.41
652 653 2.094734 CGGTAAGGAAACGGTTGTATGC 59.905 50.000 0.00 0.00 0.00 3.14
701 702 2.028020 GTGACTTAGGAGGTTGGGTCAG 60.028 54.545 0.00 0.00 34.95 3.51
715 717 2.040947 TGTTGATGGCATGGGTGACTTA 59.959 45.455 3.81 0.00 33.19 2.24
723 725 2.777972 CCGGCTGTTGATGGCATGG 61.778 63.158 3.81 0.00 0.00 3.66
728 730 2.141122 AAAACGCCGGCTGTTGATGG 62.141 55.000 28.51 13.58 0.00 3.51
806 808 4.201861 GGAGAAAGAAAGTGCGATCCATTC 60.202 45.833 0.00 0.00 0.00 2.67
832 835 1.480137 AGGACAGGATCAAAGCGAGAG 59.520 52.381 0.00 0.00 0.00 3.20
836 839 1.372087 GCCAGGACAGGATCAAAGCG 61.372 60.000 0.00 0.00 0.00 4.68
839 842 0.776810 TTGGCCAGGACAGGATCAAA 59.223 50.000 5.11 0.00 0.00 2.69
893 896 1.947456 GGTCTTTTGGGATACGATGCC 59.053 52.381 0.00 0.00 41.80 4.40
910 914 2.693074 TCCCTTGCTTTGTTTCTTGGTC 59.307 45.455 0.00 0.00 0.00 4.02
922 926 6.310149 CCTCCTATGATATTTTCCCTTGCTT 58.690 40.000 0.00 0.00 0.00 3.91
929 933 5.249393 TCTGCTCCCTCCTATGATATTTTCC 59.751 44.000 0.00 0.00 0.00 3.13
930 934 6.013812 ACTCTGCTCCCTCCTATGATATTTTC 60.014 42.308 0.00 0.00 0.00 2.29
931 935 5.848921 ACTCTGCTCCCTCCTATGATATTTT 59.151 40.000 0.00 0.00 0.00 1.82
1068 1076 1.440518 CTCGATATCGTCACCGGCG 60.441 63.158 23.61 0.00 40.80 6.46
1122 1135 1.136502 GCTGCGAGAAAACGAACAGAG 60.137 52.381 0.00 0.00 35.09 3.35
1130 1143 4.622701 AGGAAATATGCTGCGAGAAAAC 57.377 40.909 0.00 0.00 0.00 2.43
1131 1144 5.235305 GAAGGAAATATGCTGCGAGAAAA 57.765 39.130 0.00 0.00 0.00 2.29
1132 1145 4.882671 GAAGGAAATATGCTGCGAGAAA 57.117 40.909 0.00 0.00 0.00 2.52
1141 1154 7.920682 ACCAAACAATAATCGAAGGAAATATGC 59.079 33.333 0.00 0.00 0.00 3.14
1151 1164 7.873719 ATACCATGACCAAACAATAATCGAA 57.126 32.000 0.00 0.00 0.00 3.71
1152 1165 7.338196 ACAATACCATGACCAAACAATAATCGA 59.662 33.333 0.00 0.00 0.00 3.59
1153 1166 7.479980 ACAATACCATGACCAAACAATAATCG 58.520 34.615 0.00 0.00 0.00 3.34
1180 1193 3.535691 CTAGCTAGCACGAGAACCG 57.464 57.895 18.83 0.00 45.44 4.44
1193 1206 2.744202 CACGAAGGAAAACATGCTAGCT 59.256 45.455 17.23 0.00 0.00 3.32
1212 1227 3.175109 ACCGGGATCGATCTAAAACAC 57.825 47.619 23.96 6.22 39.00 3.32
1213 1228 3.527533 CAACCGGGATCGATCTAAAACA 58.472 45.455 23.96 0.00 39.00 2.83
1229 1244 1.105457 ATCACATGCCAATCCAACCG 58.895 50.000 0.00 0.00 0.00 4.44
1232 1247 8.361889 CAATCTTAATATCACATGCCAATCCAA 58.638 33.333 0.00 0.00 0.00 3.53
1257 1327 5.449041 GCAAAAGGAGCACATCGAATAATCA 60.449 40.000 0.00 0.00 0.00 2.57
1258 1328 4.972440 GCAAAAGGAGCACATCGAATAATC 59.028 41.667 0.00 0.00 0.00 1.75
1261 1331 3.374988 CAGCAAAAGGAGCACATCGAATA 59.625 43.478 0.00 0.00 0.00 1.75
1271 1341 1.208614 CGTCAGCAGCAAAAGGAGC 59.791 57.895 0.00 0.00 0.00 4.70
1272 1342 1.208614 GCGTCAGCAGCAAAAGGAG 59.791 57.895 0.00 0.00 44.35 3.69
1279 1349 1.807165 GAAGATCGCGTCAGCAGCA 60.807 57.895 5.77 0.00 45.49 4.41
1284 1354 1.916651 CAGACAAGAAGATCGCGTCAG 59.083 52.381 5.77 0.00 0.00 3.51
1285 1355 1.539827 TCAGACAAGAAGATCGCGTCA 59.460 47.619 5.77 0.00 0.00 4.35
1286 1356 2.264109 TCAGACAAGAAGATCGCGTC 57.736 50.000 5.77 2.98 0.00 5.19
1287 1357 2.803451 GATCAGACAAGAAGATCGCGT 58.197 47.619 5.77 0.00 0.00 6.01
1291 1361 4.225984 CCGATCGATCAGACAAGAAGATC 58.774 47.826 24.40 0.00 34.87 2.75
1292 1362 3.634448 ACCGATCGATCAGACAAGAAGAT 59.366 43.478 24.40 0.00 0.00 2.40
1293 1363 3.017442 ACCGATCGATCAGACAAGAAGA 58.983 45.455 24.40 0.00 0.00 2.87
1294 1364 3.111838 CACCGATCGATCAGACAAGAAG 58.888 50.000 24.40 5.32 0.00 2.85
1295 1365 2.159240 CCACCGATCGATCAGACAAGAA 60.159 50.000 24.40 0.00 0.00 2.52
1296 1366 1.405463 CCACCGATCGATCAGACAAGA 59.595 52.381 24.40 0.00 0.00 3.02
1297 1367 1.135139 ACCACCGATCGATCAGACAAG 59.865 52.381 24.40 10.25 0.00 3.16
1298 1368 1.135112 CACCACCGATCGATCAGACAA 60.135 52.381 24.40 0.00 0.00 3.18
1299 1369 0.455815 CACCACCGATCGATCAGACA 59.544 55.000 24.40 0.00 0.00 3.41
1300 1370 0.872021 GCACCACCGATCGATCAGAC 60.872 60.000 24.40 0.00 0.00 3.51
1301 1371 1.319614 TGCACCACCGATCGATCAGA 61.320 55.000 24.40 0.00 0.00 3.27
1302 1372 0.873312 CTGCACCACCGATCGATCAG 60.873 60.000 24.40 16.23 0.00 2.90
1308 1378 3.188786 GCGACTGCACCACCGATC 61.189 66.667 0.00 0.00 42.15 3.69
1311 1381 4.363990 AGAGCGACTGCACCACCG 62.364 66.667 0.00 0.00 46.23 4.94
1543 1613 3.343421 GCCACCGTGGTGTCGAAC 61.343 66.667 18.95 0.00 44.02 3.95
1649 1719 0.949105 AAGTAGACCTTTGCGGCGTG 60.949 55.000 9.37 0.00 35.61 5.34
1705 1775 1.672854 CGCCCCTGATGACCTCGTAA 61.673 60.000 0.00 0.00 0.00 3.18
1751 1821 0.235144 GCGAGCGCGACTAGAATCTA 59.765 55.000 15.92 0.00 40.82 1.98
1752 1822 1.009449 GCGAGCGCGACTAGAATCT 60.009 57.895 15.92 0.00 40.82 2.40
1753 1823 2.011881 GGCGAGCGCGACTAGAATC 61.012 63.158 15.92 0.00 43.91 2.52
1754 1824 2.026301 GGCGAGCGCGACTAGAAT 59.974 61.111 15.92 0.00 43.91 2.40
1757 1827 4.947278 CTCGGCGAGCGCGACTAG 62.947 72.222 25.31 8.80 45.51 2.57
1802 1873 1.079543 AGCAGGCAGAGTAAGCACG 60.080 57.895 0.00 0.00 0.00 5.34
1814 1885 1.127343 ATCCTCCTCTTACAGCAGGC 58.873 55.000 0.00 0.00 0.00 4.85
1853 1924 6.103997 CCATATGAGCTGCAAAACTGAATTT 58.896 36.000 3.65 0.00 0.00 1.82
1958 2037 0.247185 CCGGCTGGTGCAATTTTCAT 59.753 50.000 2.29 0.00 41.91 2.57
1959 2038 1.664873 CCGGCTGGTGCAATTTTCA 59.335 52.632 2.29 0.00 41.91 2.69
1960 2039 1.079888 CCCGGCTGGTGCAATTTTC 60.080 57.895 11.58 0.00 41.91 2.29
1961 2040 1.118356 TTCCCGGCTGGTGCAATTTT 61.118 50.000 11.58 0.00 41.91 1.82
1962 2041 0.904394 ATTCCCGGCTGGTGCAATTT 60.904 50.000 11.58 0.00 41.91 1.82
1963 2042 1.305213 ATTCCCGGCTGGTGCAATT 60.305 52.632 11.58 0.00 41.91 2.32
1964 2043 1.754234 GATTCCCGGCTGGTGCAAT 60.754 57.895 11.58 5.59 41.91 3.56
2040 2119 6.579666 AAGCGGTGCATTATCAATAATCAT 57.420 33.333 0.00 0.00 30.91 2.45
2060 2168 3.181501 TGTGAGCGGTTGCATATTTAAGC 60.182 43.478 0.00 0.00 46.23 3.09
2061 2169 4.614555 TGTGAGCGGTTGCATATTTAAG 57.385 40.909 0.00 0.00 46.23 1.85
2063 2171 3.563808 GGATGTGAGCGGTTGCATATTTA 59.436 43.478 5.13 0.00 46.23 1.40
2069 2177 2.520465 ATCGGATGTGAGCGGTTGCA 62.520 55.000 0.00 0.00 46.23 4.08
2078 2186 1.843206 TCCATTTCCCATCGGATGTGA 59.157 47.619 16.29 8.12 38.24 3.58
2143 2252 0.307760 CTCGCAAAAGACGGCAGTTT 59.692 50.000 0.00 0.00 0.00 2.66
2368 2480 7.926555 TCATGTTAGTTATAGTAAGAGCAAGGC 59.073 37.037 0.00 0.00 0.00 4.35
2412 2524 8.603242 AGAAAATTACGTACTTGATGTGACTT 57.397 30.769 0.00 0.00 0.00 3.01
2442 2554 3.319405 ACAGATCGATCTACGCTTCCATT 59.681 43.478 26.87 0.00 42.26 3.16
2445 2557 2.923643 GACAGATCGATCTACGCTTCC 58.076 52.381 26.87 8.03 42.26 3.46
2464 2576 3.733960 CCAGTCGCGTGACCTCGA 61.734 66.667 24.75 0.38 46.74 4.04
2477 2589 5.048846 AGTTGTTATGAAGTTGGTCCAGT 57.951 39.130 0.00 0.00 0.00 4.00
2534 2646 5.321927 GTTTATCTTTGTCCCTCCAAGGAA 58.678 41.667 0.00 0.00 37.67 3.36
2536 2648 4.017126 GGTTTATCTTTGTCCCTCCAAGG 58.983 47.826 0.00 0.00 34.30 3.61
2537 2649 4.923415 AGGTTTATCTTTGTCCCTCCAAG 58.077 43.478 0.00 0.00 0.00 3.61
2538 2650 5.333566 AAGGTTTATCTTTGTCCCTCCAA 57.666 39.130 0.00 0.00 0.00 3.53
2546 2658 6.205853 TGCGTGTATGAAAGGTTTATCTTTGT 59.794 34.615 0.00 0.00 37.13 2.83
2553 2665 7.618502 ATTATGTGCGTGTATGAAAGGTTTA 57.381 32.000 0.00 0.00 0.00 2.01
2561 2673 3.787785 ACGGAATTATGTGCGTGTATGA 58.212 40.909 0.00 0.00 44.38 2.15
2565 2677 2.094182 AGAGACGGAATTATGTGCGTGT 60.094 45.455 0.00 0.00 46.17 4.49
2574 2686 3.827302 GGGATGCTCTAGAGACGGAATTA 59.173 47.826 24.24 0.00 0.00 1.40
2588 2700 4.636206 AGTTATTCTTTTGTCGGGATGCTC 59.364 41.667 0.00 0.00 0.00 4.26
2602 2714 7.386851 TCATTTTCTCCTCGACAGTTATTCTT 58.613 34.615 0.00 0.00 0.00 2.52
2619 2736 4.679662 CCGTGTCGGTACTATCATTTTCT 58.320 43.478 0.00 0.00 42.73 2.52
2671 2788 1.134551 TGGGGTTGTTTGCTTCTTTGC 60.135 47.619 0.00 0.00 0.00 3.68
2717 2834 9.689501 AATAGGTATACCATCCTTTTCGAAAAA 57.310 29.630 23.87 10.76 38.89 1.94
2719 2836 9.768662 GTAATAGGTATACCATCCTTTTCGAAA 57.231 33.333 23.87 6.47 38.89 3.46
2720 2837 8.926374 TGTAATAGGTATACCATCCTTTTCGAA 58.074 33.333 23.87 0.00 38.89 3.71
2721 2838 8.481492 TGTAATAGGTATACCATCCTTTTCGA 57.519 34.615 23.87 0.00 38.89 3.71
2722 2839 8.758633 CTGTAATAGGTATACCATCCTTTTCG 57.241 38.462 23.87 1.06 38.89 3.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.