Multiple sequence alignment - TraesCS4D01G189700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G189700 chr4D 100.000 3692 0 0 1 3692 329299529 329303220 0.000000e+00 6818.0
1 TraesCS4D01G189700 chr4A 96.022 2036 58 6 680 2699 140774008 140771980 0.000000e+00 3290.0
2 TraesCS4D01G189700 chr4A 91.667 276 16 3 414 682 660381557 660381282 3.480000e-100 375.0
3 TraesCS4D01G189700 chr4A 80.226 531 50 19 3153 3671 140771746 140771259 7.590000e-92 348.0
4 TraesCS4D01G189700 chr4A 90.400 250 9 7 2734 2970 140771985 140771738 7.700000e-82 315.0
5 TraesCS4D01G189700 chr4A 88.889 63 6 1 338 400 140774093 140774032 3.950000e-10 76.8
6 TraesCS4D01G189700 chr1B 96.047 2024 57 10 688 2696 135247046 135245031 0.000000e+00 3273.0
7 TraesCS4D01G189700 chr1B 92.391 276 15 3 413 682 355920609 355920884 4.470000e-104 388.0
8 TraesCS4D01G189700 chr1B 92.029 276 16 3 413 682 497761545 497761270 2.080000e-102 383.0
9 TraesCS4D01G189700 chr1B 90.535 243 11 5 2736 2970 135245028 135244790 9.960000e-81 311.0
10 TraesCS4D01G189700 chr1B 95.028 181 9 0 1 181 135247568 135247388 6.030000e-73 285.0
11 TraesCS4D01G189700 chr1B 89.732 224 17 3 180 400 135247297 135247077 7.810000e-72 281.0
12 TraesCS4D01G189700 chr1B 78.682 258 28 22 3292 3531 388166190 388166438 2.970000e-31 147.0
13 TraesCS4D01G189700 chr4B 96.217 1163 29 3 1549 2699 409249387 409250546 0.000000e+00 1890.0
14 TraesCS4D01G189700 chr4B 93.349 872 38 8 682 1552 409236631 409237483 0.000000e+00 1271.0
15 TraesCS4D01G189700 chr4B 82.664 548 49 18 3153 3690 409250779 409251290 9.410000e-121 444.0
16 TraesCS4D01G189700 chr4B 90.984 244 8 5 2740 2970 409250545 409250787 2.140000e-82 316.0
17 TraesCS4D01G189700 chr4B 94.828 58 3 0 338 395 409236543 409236600 1.410000e-14 91.6
18 TraesCS4D01G189700 chr5B 92.832 279 19 1 412 689 684613713 684613991 1.600000e-108 403.0
19 TraesCS4D01G189700 chr5B 92.754 276 14 3 413 682 421544425 421544150 9.610000e-106 394.0
20 TraesCS4D01G189700 chr5B 72.843 939 180 56 1408 2322 276823731 276824618 6.120000e-63 252.0
21 TraesCS4D01G189700 chr5B 90.476 168 13 1 2984 3151 609847930 609848094 6.210000e-53 219.0
22 TraesCS4D01G189700 chr5B 96.875 32 1 0 2934 2965 43454713 43454682 2.000000e-03 54.7
23 TraesCS4D01G189700 chr7B 92.727 275 15 2 413 682 310092502 310092228 3.460000e-105 392.0
24 TraesCS4D01G189700 chr7B 91.667 276 17 3 413 682 569734528 569734803 9.680000e-101 377.0
25 TraesCS4D01G189700 chr6B 92.391 276 19 1 409 682 184351860 184352135 3.460000e-105 392.0
26 TraesCS4D01G189700 chr3D 92.222 270 19 1 413 682 260996141 260996408 7.480000e-102 381.0
27 TraesCS4D01G189700 chr3D 85.417 96 14 0 1523 1618 613590366 613590271 2.350000e-17 100.0
28 TraesCS4D01G189700 chr3D 94.595 37 1 1 2933 2969 182029655 182029620 5.150000e-04 56.5
29 TraesCS4D01G189700 chr3D 96.774 31 1 0 3228 3258 588308350 588308320 7.000000e-03 52.8
30 TraesCS4D01G189700 chr1A 95.580 181 7 1 2971 3151 258749146 258749325 4.670000e-74 289.0
31 TraesCS4D01G189700 chr1A 95.028 181 7 1 2971 3151 568783789 568783967 2.170000e-72 283.0
32 TraesCS4D01G189700 chr1A 92.857 182 11 1 2970 3151 557862609 557862788 2.830000e-66 263.0
33 TraesCS4D01G189700 chr5A 72.679 937 185 56 1408 2322 327726025 327726912 2.850000e-61 246.0
34 TraesCS4D01G189700 chr5A 94.340 53 3 0 2971 3023 644998484 644998432 8.500000e-12 82.4
35 TraesCS4D01G189700 chrUn 88.202 178 20 1 2971 3148 241847447 241847623 1.040000e-50 211.0
36 TraesCS4D01G189700 chr5D 77.108 332 64 11 1997 2322 229141907 229141582 8.140000e-42 182.0
37 TraesCS4D01G189700 chr6D 86.207 116 12 4 3292 3404 306310595 306310481 5.010000e-24 122.0
38 TraesCS4D01G189700 chr6A 82.979 94 16 0 1530 1623 100653175 100653082 6.570000e-13 86.1
39 TraesCS4D01G189700 chr6A 92.500 40 3 0 2930 2969 571798937 571798976 1.430000e-04 58.4
40 TraesCS4D01G189700 chr3B 100.000 29 0 0 2933 2961 260316911 260316883 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G189700 chr4D 329299529 329303220 3691 False 6818.000000 6818 100.00000 1 3692 1 chr4D.!!$F1 3691
1 TraesCS4D01G189700 chr4A 140771259 140774093 2834 True 1007.450000 3290 88.88425 338 3671 4 chr4A.!!$R2 3333
2 TraesCS4D01G189700 chr1B 135244790 135247568 2778 True 1037.500000 3273 92.83550 1 2970 4 chr1B.!!$R2 2969
3 TraesCS4D01G189700 chr4B 409249387 409251290 1903 False 883.333333 1890 89.95500 1549 3690 3 chr4B.!!$F2 2141
4 TraesCS4D01G189700 chr4B 409236543 409237483 940 False 681.300000 1271 94.08850 338 1552 2 chr4B.!!$F1 1214
5 TraesCS4D01G189700 chr5B 276823731 276824618 887 False 252.000000 252 72.84300 1408 2322 1 chr5B.!!$F1 914
6 TraesCS4D01G189700 chr5A 327726025 327726912 887 False 246.000000 246 72.67900 1408 2322 1 chr5A.!!$F1 914

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
430 537 0.109342 CCTTAGGCTGGCCATAGTGG 59.891 60.0 5.51 0.02 41.55 4.00 F
431 538 0.109342 CTTAGGCTGGCCATAGTGGG 59.891 60.0 5.51 0.00 38.19 4.61 F
437 544 0.182775 CTGGCCATAGTGGGGGTAAC 59.817 60.0 5.51 0.00 38.19 2.50 F
488 595 0.323633 ACATGCTTATGTGGCAGGCA 60.324 50.0 0.00 0.00 43.93 4.75 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1972 2088 3.493334 ACCGGTTGTATATCCTGATCGA 58.507 45.455 0.00 0.00 0.00 3.59 R
2551 2667 2.436469 CAGTGCTGCCATGGCGTA 60.436 61.111 30.87 21.39 45.51 4.42 R
2665 2793 5.195940 CACTTCCCTGTCCATTTGTATCAT 58.804 41.667 0.00 0.00 0.00 2.45 R
2710 2843 0.035152 ATGGCGAACTGATGGAGCAA 60.035 50.000 0.00 0.00 0.00 3.91 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
61 62 6.831727 TCGGTTTGTACGTAATCCATATTG 57.168 37.500 0.00 0.00 0.00 1.90
64 65 7.223193 TCGGTTTGTACGTAATCCATATTGAAG 59.777 37.037 0.00 0.00 0.00 3.02
97 98 6.516718 ACATCTTATATTGGTCAACGGAGAG 58.483 40.000 0.00 0.00 0.00 3.20
195 288 7.607991 AGCATAAAACTAATATGGATCGAAGGG 59.392 37.037 0.00 0.00 32.54 3.95
197 290 4.910458 AACTAATATGGATCGAAGGGGG 57.090 45.455 0.00 0.00 0.00 5.40
200 293 0.693049 ATATGGATCGAAGGGGGTGC 59.307 55.000 0.00 0.00 0.00 5.01
207 300 0.250989 TCGAAGGGGGTGCGAAAATT 60.251 50.000 0.00 0.00 0.00 1.82
211 304 3.305471 CGAAGGGGGTGCGAAAATTTTAA 60.305 43.478 2.75 0.00 0.00 1.52
212 305 4.633175 GAAGGGGGTGCGAAAATTTTAAA 58.367 39.130 2.75 0.00 0.00 1.52
213 306 4.691326 AGGGGGTGCGAAAATTTTAAAA 57.309 36.364 2.75 2.51 0.00 1.52
222 315 7.223193 GGTGCGAAAATTTTAAAAAGTGGTAGT 59.777 33.333 4.44 0.00 0.00 2.73
225 318 9.416058 GCGAAAATTTTAAAAAGTGGTAGTTTG 57.584 29.630 4.44 0.00 0.00 2.93
241 334 5.999600 GGTAGTTTGTTGAAACCCTAGCTTA 59.000 40.000 0.00 0.00 42.25 3.09
285 379 0.240945 CCCGATGCTTGTTGGTGTTC 59.759 55.000 0.00 0.00 0.00 3.18
286 380 0.240945 CCGATGCTTGTTGGTGTTCC 59.759 55.000 0.00 0.00 0.00 3.62
287 381 0.950836 CGATGCTTGTTGGTGTTCCA 59.049 50.000 0.00 0.00 42.66 3.53
288 382 1.069022 CGATGCTTGTTGGTGTTCCAG 60.069 52.381 0.00 0.00 45.22 3.86
289 383 2.229792 GATGCTTGTTGGTGTTCCAGA 58.770 47.619 0.00 0.00 45.22 3.86
291 385 1.064758 TGCTTGTTGGTGTTCCAGACT 60.065 47.619 0.00 0.00 45.22 3.24
292 386 2.024414 GCTTGTTGGTGTTCCAGACTT 58.976 47.619 0.00 0.00 45.22 3.01
293 387 2.033424 GCTTGTTGGTGTTCCAGACTTC 59.967 50.000 0.00 0.00 45.22 3.01
294 388 2.341846 TGTTGGTGTTCCAGACTTCC 57.658 50.000 0.00 0.00 45.22 3.46
295 389 1.562008 TGTTGGTGTTCCAGACTTCCA 59.438 47.619 0.00 0.00 45.22 3.53
385 479 3.264193 TGACTGCATCCCTACATTGTTCT 59.736 43.478 0.00 0.00 0.00 3.01
414 521 8.003044 TGTACTAGTAGTGGCAGTATATTCCTT 58.997 37.037 13.29 0.00 0.00 3.36
416 523 8.638629 ACTAGTAGTGGCAGTATATTCCTTAG 57.361 38.462 5.16 3.04 0.00 2.18
417 524 6.919775 AGTAGTGGCAGTATATTCCTTAGG 57.080 41.667 5.16 0.00 0.00 2.69
418 525 4.625607 AGTGGCAGTATATTCCTTAGGC 57.374 45.455 0.00 0.00 0.00 3.93
419 526 4.235372 AGTGGCAGTATATTCCTTAGGCT 58.765 43.478 0.00 0.00 0.00 4.58
420 527 4.040952 AGTGGCAGTATATTCCTTAGGCTG 59.959 45.833 0.00 0.00 0.00 4.85
421 528 3.327757 TGGCAGTATATTCCTTAGGCTGG 59.672 47.826 0.00 0.00 0.00 4.85
422 529 3.339141 GCAGTATATTCCTTAGGCTGGC 58.661 50.000 0.00 0.00 0.00 4.85
423 530 3.870299 GCAGTATATTCCTTAGGCTGGCC 60.870 52.174 3.00 3.00 0.00 5.36
424 531 3.327757 CAGTATATTCCTTAGGCTGGCCA 59.672 47.826 14.39 4.71 38.92 5.36
425 532 4.018960 CAGTATATTCCTTAGGCTGGCCAT 60.019 45.833 5.51 0.00 38.92 4.40
426 533 5.189736 CAGTATATTCCTTAGGCTGGCCATA 59.810 44.000 5.51 0.00 38.92 2.74
427 534 4.851639 ATATTCCTTAGGCTGGCCATAG 57.148 45.455 5.51 9.69 38.92 2.23
428 535 1.893315 TTCCTTAGGCTGGCCATAGT 58.107 50.000 5.51 0.00 38.92 2.12
429 536 1.131638 TCCTTAGGCTGGCCATAGTG 58.868 55.000 5.51 0.00 38.92 2.74
430 537 0.109342 CCTTAGGCTGGCCATAGTGG 59.891 60.000 5.51 0.02 41.55 4.00
431 538 0.109342 CTTAGGCTGGCCATAGTGGG 59.891 60.000 5.51 0.00 38.19 4.61
432 539 1.352622 TTAGGCTGGCCATAGTGGGG 61.353 60.000 5.51 0.00 38.19 4.96
433 540 4.209866 GGCTGGCCATAGTGGGGG 62.210 72.222 5.51 0.00 38.19 5.40
434 541 3.420482 GCTGGCCATAGTGGGGGT 61.420 66.667 5.51 0.00 38.19 4.95
435 542 2.076184 GCTGGCCATAGTGGGGGTA 61.076 63.158 5.51 0.00 38.19 3.69
436 543 1.641552 GCTGGCCATAGTGGGGGTAA 61.642 60.000 5.51 0.00 38.19 2.85
437 544 0.182775 CTGGCCATAGTGGGGGTAAC 59.817 60.000 5.51 0.00 38.19 2.50
438 545 0.550393 TGGCCATAGTGGGGGTAACA 60.550 55.000 0.00 0.00 38.19 2.41
439 546 0.850784 GGCCATAGTGGGGGTAACAT 59.149 55.000 0.00 0.00 38.19 2.71
440 547 2.059490 GGCCATAGTGGGGGTAACATA 58.941 52.381 0.00 0.00 38.19 2.29
441 548 2.444010 GGCCATAGTGGGGGTAACATAA 59.556 50.000 0.00 0.00 38.19 1.90
442 549 3.497942 GGCCATAGTGGGGGTAACATAAG 60.498 52.174 0.00 0.00 38.19 1.73
443 550 3.137728 GCCATAGTGGGGGTAACATAAGT 59.862 47.826 0.00 0.00 38.19 2.24
444 551 4.348754 GCCATAGTGGGGGTAACATAAGTA 59.651 45.833 0.00 0.00 38.19 2.24
445 552 5.512576 GCCATAGTGGGGGTAACATAAGTAG 60.513 48.000 0.00 0.00 38.19 2.57
446 553 5.605488 CCATAGTGGGGGTAACATAAGTAGT 59.395 44.000 0.00 0.00 39.74 2.73
447 554 6.783977 CCATAGTGGGGGTAACATAAGTAGTA 59.216 42.308 0.00 0.00 39.74 1.82
448 555 7.456902 CCATAGTGGGGGTAACATAAGTAGTAT 59.543 40.741 0.00 0.00 39.74 2.12
449 556 6.990908 AGTGGGGGTAACATAAGTAGTATC 57.009 41.667 0.00 0.00 39.74 2.24
450 557 6.446451 AGTGGGGGTAACATAAGTAGTATCA 58.554 40.000 0.00 0.00 39.74 2.15
451 558 7.080353 AGTGGGGGTAACATAAGTAGTATCAT 58.920 38.462 0.00 0.00 39.74 2.45
452 559 7.016268 AGTGGGGGTAACATAAGTAGTATCATG 59.984 40.741 0.00 0.00 39.74 3.07
453 560 6.847567 TGGGGGTAACATAAGTAGTATCATGT 59.152 38.462 0.00 0.00 39.74 3.21
454 561 8.011883 TGGGGGTAACATAAGTAGTATCATGTA 58.988 37.037 0.00 0.00 39.74 2.29
455 562 8.309656 GGGGGTAACATAAGTAGTATCATGTAC 58.690 40.741 0.00 0.00 39.74 2.90
456 563 9.086758 GGGGTAACATAAGTAGTATCATGTACT 57.913 37.037 11.17 11.17 39.74 2.73
461 568 8.777578 ACATAAGTAGTATCATGTACTTGGGA 57.222 34.615 13.83 0.00 39.34 4.37
462 569 8.639761 ACATAAGTAGTATCATGTACTTGGGAC 58.360 37.037 13.83 7.21 39.34 4.46
463 570 8.861086 CATAAGTAGTATCATGTACTTGGGACT 58.139 37.037 13.83 15.68 39.34 3.85
464 571 6.963083 AGTAGTATCATGTACTTGGGACTC 57.037 41.667 15.15 10.01 0.00 3.36
465 572 4.920640 AGTATCATGTACTTGGGACTCG 57.079 45.455 8.74 0.00 0.00 4.18
466 573 4.279145 AGTATCATGTACTTGGGACTCGT 58.721 43.478 8.74 0.00 0.00 4.18
467 574 5.443283 AGTATCATGTACTTGGGACTCGTA 58.557 41.667 8.74 0.00 0.00 3.43
468 575 5.889853 AGTATCATGTACTTGGGACTCGTAA 59.110 40.000 8.74 0.00 0.00 3.18
469 576 5.670792 ATCATGTACTTGGGACTCGTAAA 57.329 39.130 8.74 0.00 0.00 2.01
470 577 4.813027 TCATGTACTTGGGACTCGTAAAC 58.187 43.478 8.74 0.00 0.00 2.01
471 578 4.281435 TCATGTACTTGGGACTCGTAAACA 59.719 41.667 8.74 0.00 0.00 2.83
472 579 4.877378 TGTACTTGGGACTCGTAAACAT 57.123 40.909 0.00 0.00 0.00 2.71
473 580 4.562082 TGTACTTGGGACTCGTAAACATG 58.438 43.478 0.00 0.00 0.00 3.21
474 581 2.423577 ACTTGGGACTCGTAAACATGC 58.576 47.619 0.00 0.00 0.00 4.06
475 582 2.038557 ACTTGGGACTCGTAAACATGCT 59.961 45.455 0.00 0.00 0.00 3.79
476 583 2.851263 TGGGACTCGTAAACATGCTT 57.149 45.000 0.00 0.00 0.00 3.91
477 584 3.965379 TGGGACTCGTAAACATGCTTA 57.035 42.857 0.00 0.00 0.00 3.09
478 585 4.481368 TGGGACTCGTAAACATGCTTAT 57.519 40.909 0.00 0.00 0.00 1.73
479 586 4.188462 TGGGACTCGTAAACATGCTTATG 58.812 43.478 2.23 2.23 0.00 1.90
480 587 4.189231 GGGACTCGTAAACATGCTTATGT 58.811 43.478 7.73 1.37 36.10 2.29
481 588 4.034048 GGGACTCGTAAACATGCTTATGTG 59.966 45.833 7.73 7.90 34.56 3.21
482 589 4.034048 GGACTCGTAAACATGCTTATGTGG 59.966 45.833 12.39 7.96 34.56 4.17
483 590 3.374058 ACTCGTAAACATGCTTATGTGGC 59.626 43.478 12.39 0.00 34.56 5.01
484 591 3.339141 TCGTAAACATGCTTATGTGGCA 58.661 40.909 7.73 0.00 44.05 4.92
485 592 3.373748 TCGTAAACATGCTTATGTGGCAG 59.626 43.478 7.73 0.00 43.15 4.85
486 593 3.487376 CGTAAACATGCTTATGTGGCAGG 60.487 47.826 0.00 0.00 45.30 4.85
487 594 0.819582 AACATGCTTATGTGGCAGGC 59.180 50.000 0.00 0.00 43.93 4.85
488 595 0.323633 ACATGCTTATGTGGCAGGCA 60.324 50.000 0.00 0.00 43.93 4.75
489 596 0.818938 CATGCTTATGTGGCAGGCAA 59.181 50.000 0.00 0.00 43.15 4.52
490 597 1.411246 CATGCTTATGTGGCAGGCAAT 59.589 47.619 0.00 0.00 43.15 3.56
491 598 1.559368 TGCTTATGTGGCAGGCAATT 58.441 45.000 0.00 0.00 34.56 2.32
492 599 2.732763 TGCTTATGTGGCAGGCAATTA 58.267 42.857 0.00 0.00 34.56 1.40
493 600 3.095332 TGCTTATGTGGCAGGCAATTAA 58.905 40.909 0.00 0.00 34.56 1.40
494 601 3.513119 TGCTTATGTGGCAGGCAATTAAA 59.487 39.130 0.00 0.00 34.56 1.52
495 602 4.114794 GCTTATGTGGCAGGCAATTAAAG 58.885 43.478 0.00 1.93 0.00 1.85
496 603 4.142182 GCTTATGTGGCAGGCAATTAAAGA 60.142 41.667 0.00 0.00 0.00 2.52
497 604 5.624281 GCTTATGTGGCAGGCAATTAAAGAA 60.624 40.000 0.00 0.00 0.00 2.52
498 605 3.940209 TGTGGCAGGCAATTAAAGAAG 57.060 42.857 0.00 0.00 0.00 2.85
499 606 3.495331 TGTGGCAGGCAATTAAAGAAGA 58.505 40.909 0.00 0.00 0.00 2.87
500 607 3.507233 TGTGGCAGGCAATTAAAGAAGAG 59.493 43.478 0.00 0.00 0.00 2.85
501 608 3.758554 GTGGCAGGCAATTAAAGAAGAGA 59.241 43.478 0.00 0.00 0.00 3.10
502 609 4.012374 TGGCAGGCAATTAAAGAAGAGAG 58.988 43.478 0.00 0.00 0.00 3.20
503 610 4.263462 TGGCAGGCAATTAAAGAAGAGAGA 60.263 41.667 0.00 0.00 0.00 3.10
504 611 4.335037 GGCAGGCAATTAAAGAAGAGAGAG 59.665 45.833 0.00 0.00 0.00 3.20
505 612 5.181748 GCAGGCAATTAAAGAAGAGAGAGA 58.818 41.667 0.00 0.00 0.00 3.10
506 613 5.821995 GCAGGCAATTAAAGAAGAGAGAGAT 59.178 40.000 0.00 0.00 0.00 2.75
507 614 6.238429 GCAGGCAATTAAAGAAGAGAGAGATG 60.238 42.308 0.00 0.00 0.00 2.90
508 615 6.260493 CAGGCAATTAAAGAAGAGAGAGATGG 59.740 42.308 0.00 0.00 0.00 3.51
509 616 6.069731 AGGCAATTAAAGAAGAGAGAGATGGT 60.070 38.462 0.00 0.00 0.00 3.55
510 617 6.601217 GGCAATTAAAGAAGAGAGAGATGGTT 59.399 38.462 0.00 0.00 0.00 3.67
511 618 7.770897 GGCAATTAAAGAAGAGAGAGATGGTTA 59.229 37.037 0.00 0.00 0.00 2.85
512 619 9.336171 GCAATTAAAGAAGAGAGAGATGGTTAT 57.664 33.333 0.00 0.00 0.00 1.89
564 671 8.962884 AATAAATATGATGCTACTGTGTGTCA 57.037 30.769 0.00 0.00 0.00 3.58
565 672 9.565090 AATAAATATGATGCTACTGTGTGTCAT 57.435 29.630 0.00 0.00 0.00 3.06
566 673 6.856135 AATATGATGCTACTGTGTGTCATG 57.144 37.500 0.00 0.00 0.00 3.07
567 674 2.349590 TGATGCTACTGTGTGTCATGC 58.650 47.619 0.00 0.00 0.00 4.06
568 675 2.289569 TGATGCTACTGTGTGTCATGCA 60.290 45.455 0.00 0.00 35.34 3.96
569 676 2.477845 TGCTACTGTGTGTCATGCAT 57.522 45.000 0.00 0.00 0.00 3.96
570 677 2.078392 TGCTACTGTGTGTCATGCATG 58.922 47.619 21.07 21.07 0.00 4.06
571 678 1.399440 GCTACTGTGTGTCATGCATGG 59.601 52.381 25.97 10.76 0.00 3.66
572 679 1.399440 CTACTGTGTGTCATGCATGGC 59.601 52.381 24.40 24.40 0.00 4.40
573 680 0.537828 ACTGTGTGTCATGCATGGCA 60.538 50.000 29.45 29.45 44.86 4.92
574 681 0.599060 CTGTGTGTCATGCATGGCAA 59.401 50.000 34.01 21.07 44.94 4.52
575 682 1.203758 CTGTGTGTCATGCATGGCAAT 59.796 47.619 34.01 0.00 44.94 3.56
576 683 2.424246 CTGTGTGTCATGCATGGCAATA 59.576 45.455 34.01 22.99 44.94 1.90
577 684 2.824341 TGTGTGTCATGCATGGCAATAA 59.176 40.909 34.01 20.11 44.94 1.40
578 685 3.257624 TGTGTGTCATGCATGGCAATAAA 59.742 39.130 34.01 18.93 44.94 1.40
579 686 4.081586 TGTGTGTCATGCATGGCAATAAAT 60.082 37.500 34.01 0.00 44.94 1.40
580 687 5.126707 TGTGTGTCATGCATGGCAATAAATA 59.873 36.000 34.01 15.90 44.94 1.40
581 688 6.041511 GTGTGTCATGCATGGCAATAAATAA 58.958 36.000 34.01 7.61 44.94 1.40
582 689 6.534436 GTGTGTCATGCATGGCAATAAATAAA 59.466 34.615 34.01 6.82 44.94 1.40
583 690 7.064371 GTGTGTCATGCATGGCAATAAATAAAA 59.936 33.333 34.01 6.03 44.94 1.52
584 691 7.064371 TGTGTCATGCATGGCAATAAATAAAAC 59.936 33.333 34.01 18.09 44.94 2.43
585 692 6.538021 TGTCATGCATGGCAATAAATAAAACC 59.462 34.615 30.82 1.19 43.62 3.27
586 693 6.538021 GTCATGCATGGCAATAAATAAAACCA 59.462 34.615 26.04 0.00 43.62 3.67
587 694 7.227116 GTCATGCATGGCAATAAATAAAACCAT 59.773 33.333 26.04 0.00 43.62 3.55
588 695 7.774157 TCATGCATGGCAATAAATAAAACCATT 59.226 29.630 25.97 0.00 43.62 3.16
589 696 7.934855 TGCATGGCAATAAATAAAACCATTT 57.065 28.000 0.00 0.00 35.76 2.32
590 697 9.624373 ATGCATGGCAATAAATAAAACCATTTA 57.376 25.926 0.00 0.00 43.62 1.40
591 698 9.624373 TGCATGGCAATAAATAAAACCATTTAT 57.376 25.926 0.00 0.00 40.95 1.40
592 699 9.881529 GCATGGCAATAAATAAAACCATTTATG 57.118 29.630 0.00 0.00 40.10 1.90
668 775 9.750783 AACATTACTAGTCTAAGTTACTCCTCA 57.249 33.333 0.00 0.00 0.00 3.86
669 776 9.176460 ACATTACTAGTCTAAGTTACTCCTCAC 57.824 37.037 0.00 0.00 0.00 3.51
670 777 9.398538 CATTACTAGTCTAAGTTACTCCTCACT 57.601 37.037 0.00 0.00 0.00 3.41
673 780 8.967664 ACTAGTCTAAGTTACTCCTCACTATG 57.032 38.462 0.00 0.00 0.00 2.23
674 781 8.770322 ACTAGTCTAAGTTACTCCTCACTATGA 58.230 37.037 0.00 0.00 0.00 2.15
675 782 7.868906 AGTCTAAGTTACTCCTCACTATGAC 57.131 40.000 0.00 0.00 0.00 3.06
676 783 6.829811 AGTCTAAGTTACTCCTCACTATGACC 59.170 42.308 0.00 0.00 31.22 4.02
677 784 6.602406 GTCTAAGTTACTCCTCACTATGACCA 59.398 42.308 0.00 0.00 0.00 4.02
678 785 5.923733 AAGTTACTCCTCACTATGACCAG 57.076 43.478 0.00 0.00 0.00 4.00
679 786 3.702045 AGTTACTCCTCACTATGACCAGC 59.298 47.826 0.00 0.00 0.00 4.85
680 787 1.490574 ACTCCTCACTATGACCAGCC 58.509 55.000 0.00 0.00 0.00 4.85
681 788 1.007721 ACTCCTCACTATGACCAGCCT 59.992 52.381 0.00 0.00 0.00 4.58
682 789 1.686052 CTCCTCACTATGACCAGCCTC 59.314 57.143 0.00 0.00 0.00 4.70
683 790 1.007118 TCCTCACTATGACCAGCCTCA 59.993 52.381 0.00 0.00 0.00 3.86
684 791 1.411977 CCTCACTATGACCAGCCTCAG 59.588 57.143 0.00 0.00 0.00 3.35
685 792 2.382882 CTCACTATGACCAGCCTCAGA 58.617 52.381 0.00 0.00 0.00 3.27
686 793 2.762887 CTCACTATGACCAGCCTCAGAA 59.237 50.000 0.00 0.00 0.00 3.02
707 814 9.519191 TCAGAAGGATCATTGAATTTTTGTAGA 57.481 29.630 0.00 0.00 0.00 2.59
918 1027 2.350192 TGCAGATTTGTAACATACGGCG 59.650 45.455 4.80 4.80 0.00 6.46
972 1081 4.924462 GCTACTCACCAAACAGTTCTACTC 59.076 45.833 0.00 0.00 0.00 2.59
991 1101 2.074948 ACTATCTGGGCAGGGCAGG 61.075 63.158 0.00 0.00 0.00 4.85
992 1102 2.773918 TATCTGGGCAGGGCAGGG 60.774 66.667 0.00 0.00 0.00 4.45
1995 2111 3.669824 CGATCAGGATATACAACCGGTCG 60.670 52.174 8.04 0.00 31.68 4.79
2551 2667 3.061848 CGTGCCCGCCCAAGATTT 61.062 61.111 0.00 0.00 0.00 2.17
2699 2832 2.038557 ACAGGGAAGTGTAGTTGCGATT 59.961 45.455 0.00 0.00 0.00 3.34
2700 2833 2.416547 CAGGGAAGTGTAGTTGCGATTG 59.583 50.000 0.00 0.00 0.00 2.67
2701 2834 1.130561 GGGAAGTGTAGTTGCGATTGC 59.869 52.381 0.00 0.00 43.20 3.56
2722 2855 3.341823 CAACTAGCTTTGCTCCATCAGT 58.658 45.455 0.00 0.00 40.44 3.41
2723 2856 3.710209 ACTAGCTTTGCTCCATCAGTT 57.290 42.857 0.00 0.00 40.44 3.16
2724 2857 3.604582 ACTAGCTTTGCTCCATCAGTTC 58.395 45.455 0.00 0.00 40.44 3.01
2725 2858 1.446907 AGCTTTGCTCCATCAGTTCG 58.553 50.000 0.00 0.00 30.62 3.95
2726 2859 0.179179 GCTTTGCTCCATCAGTTCGC 60.179 55.000 0.00 0.00 0.00 4.70
2727 2860 0.449388 CTTTGCTCCATCAGTTCGCC 59.551 55.000 0.00 0.00 0.00 5.54
2728 2861 0.250684 TTTGCTCCATCAGTTCGCCA 60.251 50.000 0.00 0.00 0.00 5.69
2729 2862 0.035152 TTGCTCCATCAGTTCGCCAT 60.035 50.000 0.00 0.00 0.00 4.40
2730 2863 0.745486 TGCTCCATCAGTTCGCCATG 60.745 55.000 0.00 0.00 0.00 3.66
2731 2864 0.462581 GCTCCATCAGTTCGCCATGA 60.463 55.000 0.00 0.00 0.00 3.07
2732 2865 1.293924 CTCCATCAGTTCGCCATGAC 58.706 55.000 0.00 0.00 0.00 3.06
2733 2866 0.904649 TCCATCAGTTCGCCATGACT 59.095 50.000 0.00 0.00 0.00 3.41
2734 2867 1.012086 CCATCAGTTCGCCATGACTG 58.988 55.000 6.03 6.03 0.00 3.51
2735 2868 0.376152 CATCAGTTCGCCATGACTGC 59.624 55.000 7.27 0.00 0.00 4.40
2736 2869 0.251354 ATCAGTTCGCCATGACTGCT 59.749 50.000 7.27 0.00 0.00 4.24
2737 2870 0.894835 TCAGTTCGCCATGACTGCTA 59.105 50.000 7.27 0.00 0.00 3.49
2738 2871 1.482182 TCAGTTCGCCATGACTGCTAT 59.518 47.619 7.27 0.00 0.00 2.97
2739 2872 2.693074 TCAGTTCGCCATGACTGCTATA 59.307 45.455 7.27 0.00 0.00 1.31
2740 2873 3.321968 TCAGTTCGCCATGACTGCTATAT 59.678 43.478 7.27 0.00 0.00 0.86
2741 2874 3.431233 CAGTTCGCCATGACTGCTATATG 59.569 47.826 0.00 0.00 0.00 1.78
2742 2875 3.070159 AGTTCGCCATGACTGCTATATGT 59.930 43.478 0.00 0.00 0.00 2.29
2743 2876 3.030668 TCGCCATGACTGCTATATGTG 57.969 47.619 0.00 0.00 0.00 3.21
2744 2877 2.071540 CGCCATGACTGCTATATGTGG 58.928 52.381 0.00 0.00 0.00 4.17
2745 2878 2.289010 CGCCATGACTGCTATATGTGGA 60.289 50.000 0.00 0.00 0.00 4.02
2746 2879 3.070018 GCCATGACTGCTATATGTGGAC 58.930 50.000 0.00 0.00 0.00 4.02
2747 2880 3.320626 CCATGACTGCTATATGTGGACG 58.679 50.000 0.00 0.00 0.00 4.79
2748 2881 3.243873 CCATGACTGCTATATGTGGACGT 60.244 47.826 0.00 0.00 0.00 4.34
2749 2882 3.436700 TGACTGCTATATGTGGACGTG 57.563 47.619 0.00 0.00 0.00 4.49
2750 2883 2.758423 TGACTGCTATATGTGGACGTGT 59.242 45.455 0.00 0.00 0.00 4.49
2751 2884 3.116300 GACTGCTATATGTGGACGTGTG 58.884 50.000 0.00 0.00 0.00 3.82
2752 2885 2.496070 ACTGCTATATGTGGACGTGTGT 59.504 45.455 0.00 0.00 0.00 3.72
2828 2961 0.666274 GCTGCGCCCAACTTAAAACC 60.666 55.000 4.18 0.00 0.00 3.27
2829 2962 0.958822 CTGCGCCCAACTTAAAACCT 59.041 50.000 4.18 0.00 0.00 3.50
2857 2996 2.500509 TAAACGCAAAAAGGGCAGTG 57.499 45.000 0.00 0.00 0.00 3.66
2941 3086 5.135383 CAGATGGATAATTCTTTGGGAGCA 58.865 41.667 0.00 0.00 0.00 4.26
2970 3115 3.841643 CTCAGGTGCCTGCAAATTTTAG 58.158 45.455 13.12 0.00 43.31 1.85
2971 3116 3.495331 TCAGGTGCCTGCAAATTTTAGA 58.505 40.909 13.12 0.00 43.31 2.10
2972 3117 3.507233 TCAGGTGCCTGCAAATTTTAGAG 59.493 43.478 13.12 0.00 43.31 2.43
2973 3118 2.232208 AGGTGCCTGCAAATTTTAGAGC 59.768 45.455 0.00 0.00 0.00 4.09
2974 3119 2.029110 GGTGCCTGCAAATTTTAGAGCA 60.029 45.455 0.00 1.51 35.43 4.26
2975 3120 3.554752 GGTGCCTGCAAATTTTAGAGCAA 60.555 43.478 12.65 0.00 36.44 3.91
2976 3121 4.248058 GTGCCTGCAAATTTTAGAGCAAT 58.752 39.130 12.65 0.00 36.44 3.56
2977 3122 4.092383 GTGCCTGCAAATTTTAGAGCAATG 59.908 41.667 12.65 5.58 36.44 2.82
2978 3123 3.063045 GCCTGCAAATTTTAGAGCAATGC 59.937 43.478 0.00 0.00 36.44 3.56
2979 3124 4.501071 CCTGCAAATTTTAGAGCAATGCT 58.499 39.130 7.79 7.79 43.88 3.79
2980 3125 5.653507 CCTGCAAATTTTAGAGCAATGCTA 58.346 37.500 8.12 0.00 39.88 3.49
2981 3126 5.747197 CCTGCAAATTTTAGAGCAATGCTAG 59.253 40.000 8.12 0.00 39.88 3.42
2982 3127 6.405065 CCTGCAAATTTTAGAGCAATGCTAGA 60.405 38.462 8.12 0.00 39.88 2.43
2983 3128 6.324819 TGCAAATTTTAGAGCAATGCTAGAC 58.675 36.000 8.12 0.00 39.88 2.59
2984 3129 5.745769 GCAAATTTTAGAGCAATGCTAGACC 59.254 40.000 8.12 0.00 39.88 3.85
2985 3130 6.268566 CAAATTTTAGAGCAATGCTAGACCC 58.731 40.000 8.12 0.00 39.88 4.46
2986 3131 4.568072 TTTTAGAGCAATGCTAGACCCA 57.432 40.909 8.12 0.00 39.88 4.51
2987 3132 3.543680 TTAGAGCAATGCTAGACCCAC 57.456 47.619 8.12 0.00 39.88 4.61
2988 3133 0.176680 AGAGCAATGCTAGACCCACG 59.823 55.000 8.12 0.00 39.88 4.94
2989 3134 0.108138 GAGCAATGCTAGACCCACGT 60.108 55.000 8.12 0.00 39.88 4.49
2990 3135 1.136305 GAGCAATGCTAGACCCACGTA 59.864 52.381 8.12 0.00 39.88 3.57
2991 3136 1.134788 AGCAATGCTAGACCCACGTAC 60.135 52.381 5.69 0.00 36.99 3.67
2992 3137 1.404986 GCAATGCTAGACCCACGTACA 60.405 52.381 0.00 0.00 0.00 2.90
2993 3138 2.540515 CAATGCTAGACCCACGTACAG 58.459 52.381 0.00 0.00 0.00 2.74
2994 3139 1.848652 ATGCTAGACCCACGTACAGT 58.151 50.000 0.00 0.00 0.00 3.55
2995 3140 1.624336 TGCTAGACCCACGTACAGTT 58.376 50.000 0.00 0.00 0.00 3.16
2996 3141 2.794103 TGCTAGACCCACGTACAGTTA 58.206 47.619 0.00 0.00 0.00 2.24
2997 3142 2.489329 TGCTAGACCCACGTACAGTTAC 59.511 50.000 0.00 0.00 0.00 2.50
3010 3155 5.893863 CGTACAGTTACGTGAGGTTTTTAC 58.106 41.667 0.00 0.00 45.11 2.01
3011 3156 5.386323 CGTACAGTTACGTGAGGTTTTTACG 60.386 44.000 0.00 0.00 45.11 3.18
3019 3164 5.025986 CGTGAGGTTTTTACGTAAATGCT 57.974 39.130 20.72 7.51 33.48 3.79
3020 3165 4.843984 CGTGAGGTTTTTACGTAAATGCTG 59.156 41.667 20.72 3.58 33.48 4.41
3021 3166 5.333492 CGTGAGGTTTTTACGTAAATGCTGA 60.333 40.000 20.72 3.50 33.48 4.26
3022 3167 6.608610 GTGAGGTTTTTACGTAAATGCTGAT 58.391 36.000 20.72 6.21 0.00 2.90
3023 3168 7.081976 GTGAGGTTTTTACGTAAATGCTGATT 58.918 34.615 20.72 4.49 0.00 2.57
3024 3169 7.593644 GTGAGGTTTTTACGTAAATGCTGATTT 59.406 33.333 20.72 3.04 35.83 2.17
3025 3170 7.593273 TGAGGTTTTTACGTAAATGCTGATTTG 59.407 33.333 20.72 0.00 33.63 2.32
3026 3171 7.653647 AGGTTTTTACGTAAATGCTGATTTGA 58.346 30.769 20.72 0.00 33.63 2.69
3027 3172 8.138712 AGGTTTTTACGTAAATGCTGATTTGAA 58.861 29.630 20.72 6.06 33.63 2.69
3028 3173 8.211838 GGTTTTTACGTAAATGCTGATTTGAAC 58.788 33.333 20.72 16.08 33.63 3.18
3029 3174 7.541743 TTTTACGTAAATGCTGATTTGAACG 57.458 32.000 20.72 0.00 38.57 3.95
3030 3175 4.742438 ACGTAAATGCTGATTTGAACGT 57.258 36.364 5.21 5.21 39.91 3.99
3031 3176 5.849357 ACGTAAATGCTGATTTGAACGTA 57.151 34.783 8.06 0.00 41.57 3.57
3032 3177 6.230849 ACGTAAATGCTGATTTGAACGTAA 57.769 33.333 8.06 0.00 41.57 3.18
3033 3178 6.837992 ACGTAAATGCTGATTTGAACGTAAT 58.162 32.000 8.06 0.00 41.57 1.89
3034 3179 7.302524 ACGTAAATGCTGATTTGAACGTAATT 58.697 30.769 8.06 0.00 41.57 1.40
3035 3180 8.444715 ACGTAAATGCTGATTTGAACGTAATTA 58.555 29.630 8.06 0.00 41.57 1.40
3036 3181 9.268255 CGTAAATGCTGATTTGAACGTAATTAA 57.732 29.630 0.00 0.00 32.47 1.40
3040 3185 8.633075 ATGCTGATTTGAACGTAATTAATTGG 57.367 30.769 11.05 5.38 0.00 3.16
3041 3186 7.598278 TGCTGATTTGAACGTAATTAATTGGT 58.402 30.769 11.05 5.99 0.00 3.67
3042 3187 8.085296 TGCTGATTTGAACGTAATTAATTGGTT 58.915 29.630 11.05 13.56 0.00 3.67
3043 3188 8.921670 GCTGATTTGAACGTAATTAATTGGTTT 58.078 29.630 11.05 0.88 0.00 3.27
3055 3200 9.961265 GTAATTAATTGGTTTAGGATTAGTGGC 57.039 33.333 11.05 0.00 0.00 5.01
3056 3201 8.838649 AATTAATTGGTTTAGGATTAGTGGCT 57.161 30.769 0.00 0.00 0.00 4.75
3057 3202 7.639113 TTAATTGGTTTAGGATTAGTGGCTG 57.361 36.000 0.00 0.00 0.00 4.85
3058 3203 3.644966 TGGTTTAGGATTAGTGGCTGG 57.355 47.619 0.00 0.00 0.00 4.85
3059 3204 3.186283 TGGTTTAGGATTAGTGGCTGGA 58.814 45.455 0.00 0.00 0.00 3.86
3060 3205 3.199946 TGGTTTAGGATTAGTGGCTGGAG 59.800 47.826 0.00 0.00 0.00 3.86
3061 3206 3.206964 GTTTAGGATTAGTGGCTGGAGC 58.793 50.000 0.00 0.00 41.14 4.70
3073 3218 4.660611 TGGAGCCCACCCCGGTTA 62.661 66.667 0.00 0.00 0.00 2.85
3074 3219 3.332385 GGAGCCCACCCCGGTTAA 61.332 66.667 0.00 0.00 0.00 2.01
3075 3220 2.758434 GAGCCCACCCCGGTTAAA 59.242 61.111 0.00 0.00 0.00 1.52
3076 3221 1.075305 GAGCCCACCCCGGTTAAAA 59.925 57.895 0.00 0.00 0.00 1.52
3077 3222 0.323999 GAGCCCACCCCGGTTAAAAT 60.324 55.000 0.00 0.00 0.00 1.82
3078 3223 0.323999 AGCCCACCCCGGTTAAAATC 60.324 55.000 0.00 0.00 0.00 2.17
3079 3224 0.612453 GCCCACCCCGGTTAAAATCA 60.612 55.000 0.00 0.00 0.00 2.57
3080 3225 1.470051 CCCACCCCGGTTAAAATCAG 58.530 55.000 0.00 0.00 0.00 2.90
3081 3226 1.470051 CCACCCCGGTTAAAATCAGG 58.530 55.000 0.00 0.00 0.00 3.86
3082 3227 1.470051 CACCCCGGTTAAAATCAGGG 58.530 55.000 0.00 0.00 39.44 4.45
3084 3229 3.200918 CCCGGTTAAAATCAGGGGG 57.799 57.895 0.00 0.00 36.82 5.40
3102 3247 2.541466 GGGGGAGGAGAGTATGTATGG 58.459 57.143 0.00 0.00 0.00 2.74
3103 3248 2.111972 GGGGGAGGAGAGTATGTATGGA 59.888 54.545 0.00 0.00 0.00 3.41
3104 3249 3.439558 GGGGGAGGAGAGTATGTATGGAA 60.440 52.174 0.00 0.00 0.00 3.53
3105 3250 3.835395 GGGGAGGAGAGTATGTATGGAAG 59.165 52.174 0.00 0.00 0.00 3.46
3106 3251 3.835395 GGGAGGAGAGTATGTATGGAAGG 59.165 52.174 0.00 0.00 0.00 3.46
3107 3252 3.835395 GGAGGAGAGTATGTATGGAAGGG 59.165 52.174 0.00 0.00 0.00 3.95
3108 3253 4.484912 GAGGAGAGTATGTATGGAAGGGT 58.515 47.826 0.00 0.00 0.00 4.34
3109 3254 5.459241 GGAGGAGAGTATGTATGGAAGGGTA 60.459 48.000 0.00 0.00 0.00 3.69
3110 3255 5.395611 AGGAGAGTATGTATGGAAGGGTAC 58.604 45.833 0.00 0.00 0.00 3.34
3111 3256 4.217983 GGAGAGTATGTATGGAAGGGTACG 59.782 50.000 0.00 0.00 0.00 3.67
3112 3257 4.801164 AGAGTATGTATGGAAGGGTACGT 58.199 43.478 0.00 0.00 0.00 3.57
3113 3258 5.945310 AGAGTATGTATGGAAGGGTACGTA 58.055 41.667 0.00 0.00 0.00 3.57
3114 3259 6.367983 AGAGTATGTATGGAAGGGTACGTAA 58.632 40.000 0.00 0.00 0.00 3.18
3116 3261 6.367983 AGTATGTATGGAAGGGTACGTAAGA 58.632 40.000 0.00 0.00 43.62 2.10
3117 3262 7.008941 AGTATGTATGGAAGGGTACGTAAGAT 58.991 38.462 0.00 0.00 43.62 2.40
3118 3263 6.742559 ATGTATGGAAGGGTACGTAAGATT 57.257 37.500 0.00 0.00 43.62 2.40
3119 3264 7.844493 ATGTATGGAAGGGTACGTAAGATTA 57.156 36.000 0.00 0.00 43.62 1.75
3120 3265 7.844493 TGTATGGAAGGGTACGTAAGATTAT 57.156 36.000 0.00 0.00 43.62 1.28
3121 3266 7.663827 TGTATGGAAGGGTACGTAAGATTATG 58.336 38.462 0.00 0.00 43.62 1.90
3122 3267 6.742559 ATGGAAGGGTACGTAAGATTATGT 57.257 37.500 0.00 3.17 43.62 2.29
3123 3268 7.844493 ATGGAAGGGTACGTAAGATTATGTA 57.156 36.000 0.00 1.39 43.62 2.29
3124 3269 7.281040 TGGAAGGGTACGTAAGATTATGTAG 57.719 40.000 0.00 0.00 36.21 2.74
3125 3270 6.266103 TGGAAGGGTACGTAAGATTATGTAGG 59.734 42.308 0.00 0.00 36.21 3.18
3126 3271 6.491403 GGAAGGGTACGTAAGATTATGTAGGA 59.509 42.308 0.00 0.00 36.21 2.94
3127 3272 7.178097 GGAAGGGTACGTAAGATTATGTAGGAT 59.822 40.741 0.00 0.00 36.21 3.24
3128 3273 7.700022 AGGGTACGTAAGATTATGTAGGATC 57.300 40.000 0.00 0.00 36.21 3.36
3129 3274 7.468496 AGGGTACGTAAGATTATGTAGGATCT 58.532 38.462 0.00 0.00 36.21 2.75
3130 3275 7.949006 AGGGTACGTAAGATTATGTAGGATCTT 59.051 37.037 0.00 4.29 43.17 2.40
3131 3276 8.583296 GGGTACGTAAGATTATGTAGGATCTTT 58.417 37.037 0.00 0.00 41.49 2.52
3132 3277 9.978044 GGTACGTAAGATTATGTAGGATCTTTT 57.022 33.333 0.00 0.00 41.49 2.27
3134 3279 8.798748 ACGTAAGATTATGTAGGATCTTTTCG 57.201 34.615 4.18 10.87 41.49 3.46
3135 3280 8.411683 ACGTAAGATTATGTAGGATCTTTTCGT 58.588 33.333 15.72 15.72 41.49 3.85
3136 3281 9.888878 CGTAAGATTATGTAGGATCTTTTCGTA 57.111 33.333 4.18 0.00 41.49 3.43
3139 3284 8.480133 AGATTATGTAGGATCTTTTCGTAGGT 57.520 34.615 0.00 0.00 28.42 3.08
3140 3285 8.361139 AGATTATGTAGGATCTTTTCGTAGGTG 58.639 37.037 0.00 0.00 28.42 4.00
3141 3286 5.934402 ATGTAGGATCTTTTCGTAGGTGT 57.066 39.130 0.00 0.00 0.00 4.16
3142 3287 8.523915 TTATGTAGGATCTTTTCGTAGGTGTA 57.476 34.615 0.00 0.00 0.00 2.90
3143 3288 6.446781 TGTAGGATCTTTTCGTAGGTGTAG 57.553 41.667 0.00 0.00 0.00 2.74
3144 3289 6.182627 TGTAGGATCTTTTCGTAGGTGTAGA 58.817 40.000 0.00 0.00 0.00 2.59
3145 3290 6.660521 TGTAGGATCTTTTCGTAGGTGTAGAA 59.339 38.462 0.00 0.00 0.00 2.10
3146 3291 6.793505 AGGATCTTTTCGTAGGTGTAGAAT 57.206 37.500 0.00 0.00 0.00 2.40
3147 3292 7.184067 AGGATCTTTTCGTAGGTGTAGAATT 57.816 36.000 0.00 0.00 0.00 2.17
3148 3293 8.302515 AGGATCTTTTCGTAGGTGTAGAATTA 57.697 34.615 0.00 0.00 0.00 1.40
3149 3294 8.925338 AGGATCTTTTCGTAGGTGTAGAATTAT 58.075 33.333 0.00 0.00 0.00 1.28
3150 3295 9.194271 GGATCTTTTCGTAGGTGTAGAATTATC 57.806 37.037 0.00 0.00 0.00 1.75
3151 3296 9.745880 GATCTTTTCGTAGGTGTAGAATTATCA 57.254 33.333 0.00 0.00 0.00 2.15
3152 3297 8.922058 TCTTTTCGTAGGTGTAGAATTATCAC 57.078 34.615 0.00 0.00 0.00 3.06
3153 3298 8.525316 TCTTTTCGTAGGTGTAGAATTATCACA 58.475 33.333 8.61 0.00 34.27 3.58
3154 3299 9.146984 CTTTTCGTAGGTGTAGAATTATCACAA 57.853 33.333 8.61 0.00 34.27 3.33
3155 3300 9.491675 TTTTCGTAGGTGTAGAATTATCACAAA 57.508 29.630 8.61 0.50 34.27 2.83
3156 3301 9.661563 TTTCGTAGGTGTAGAATTATCACAAAT 57.338 29.630 8.61 0.00 34.27 2.32
3157 3302 9.661563 TTCGTAGGTGTAGAATTATCACAAATT 57.338 29.630 8.61 0.00 34.27 1.82
3158 3303 9.661563 TCGTAGGTGTAGAATTATCACAAATTT 57.338 29.630 8.61 0.00 34.27 1.82
3190 3335 4.406069 CTCTGAACCGTTGCATTTACATG 58.594 43.478 0.00 0.00 0.00 3.21
3191 3336 4.068599 TCTGAACCGTTGCATTTACATGA 58.931 39.130 0.00 0.00 31.07 3.07
3213 3358 1.153353 AGTACCGCATGGAACGTTTG 58.847 50.000 0.46 0.00 39.21 2.93
3215 3360 1.532007 GTACCGCATGGAACGTTTGAA 59.468 47.619 0.46 0.00 39.21 2.69
3224 3369 3.648009 TGGAACGTTTGAATGATTTGCC 58.352 40.909 0.46 0.00 0.00 4.52
3288 3440 0.842635 CCTGAAGCCCTCCAAGCTAT 59.157 55.000 0.00 0.00 40.49 2.97
3331 3483 4.587684 GGATCTCTTGTCCCCGATAAACTA 59.412 45.833 0.00 0.00 0.00 2.24
3347 3499 4.783560 AAACTACAGTAACCACCCAACT 57.216 40.909 0.00 0.00 0.00 3.16
3470 3622 8.341173 TGAAATTTTTCCAAAATCGGTGAAATG 58.659 29.630 0.00 0.00 36.36 2.32
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 5.699915 TGGATTACGTACAAACCGAAATGAA 59.300 36.000 0.00 0.00 0.00 2.57
68 69 8.885722 TCCGTTGACCAATATAAGATGTTTTAC 58.114 33.333 0.00 0.00 0.00 2.01
73 74 6.323996 TCTCTCCGTTGACCAATATAAGATGT 59.676 38.462 0.00 0.00 0.00 3.06
85 86 1.836802 ACCTACTCTCTCCGTTGACC 58.163 55.000 0.00 0.00 0.00 4.02
97 98 6.260271 GCATAAGGTGACCATTTAACCTACTC 59.740 42.308 3.63 0.00 43.62 2.59
170 171 7.148239 CCCCTTCGATCCATATTAGTTTTATGC 60.148 40.741 0.00 0.00 0.00 3.14
175 176 4.663592 ACCCCCTTCGATCCATATTAGTTT 59.336 41.667 0.00 0.00 0.00 2.66
189 282 0.601057 AAATTTTCGCACCCCCTTCG 59.399 50.000 0.00 0.00 0.00 3.79
195 288 5.294799 ACCACTTTTTAAAATTTTCGCACCC 59.705 36.000 6.72 0.00 0.00 4.61
197 290 8.122306 ACTACCACTTTTTAAAATTTTCGCAC 57.878 30.769 6.72 0.00 0.00 5.34
207 300 9.205719 GGTTTCAACAAACTACCACTTTTTAAA 57.794 29.630 0.00 0.00 41.61 1.52
211 304 5.482526 AGGGTTTCAACAAACTACCACTTTT 59.517 36.000 0.00 0.00 41.61 2.27
212 305 5.020795 AGGGTTTCAACAAACTACCACTTT 58.979 37.500 0.00 0.00 41.61 2.66
213 306 4.606210 AGGGTTTCAACAAACTACCACTT 58.394 39.130 0.00 0.00 41.61 3.16
225 318 8.919777 ACCATAATATAAGCTAGGGTTTCAAC 57.080 34.615 0.00 0.00 27.88 3.18
267 361 0.240945 GGAACACCAACAAGCATCGG 59.759 55.000 0.00 0.00 0.00 4.18
285 379 3.261250 AGCAATGCTGGAAGTCTGG 57.739 52.632 7.07 0.00 37.57 3.86
295 389 0.459899 TACGGATCGACAGCAATGCT 59.540 50.000 0.00 0.00 40.77 3.79
310 404 2.516923 CTAGACACTTCGCTTGTACGG 58.483 52.381 0.00 0.00 0.00 4.02
343 437 5.838521 AGTCAAGTAAATGGGGTTGAATTGT 59.161 36.000 0.00 0.00 30.94 2.71
385 479 9.499479 GAATATACTGCCACTACTAGTACAGTA 57.501 37.037 23.05 23.05 44.24 2.74
414 521 1.770110 CCCCACTATGGCCAGCCTA 60.770 63.158 13.05 0.00 35.79 3.93
416 523 4.209866 CCCCCACTATGGCCAGCC 62.210 72.222 13.05 0.38 35.79 4.85
417 524 1.641552 TTACCCCCACTATGGCCAGC 61.642 60.000 13.05 0.00 35.79 4.85
418 525 0.182775 GTTACCCCCACTATGGCCAG 59.817 60.000 13.05 0.00 35.79 4.85
419 526 0.550393 TGTTACCCCCACTATGGCCA 60.550 55.000 8.56 8.56 35.79 5.36
420 527 0.850784 ATGTTACCCCCACTATGGCC 59.149 55.000 0.00 0.00 35.79 5.36
421 528 3.137728 ACTTATGTTACCCCCACTATGGC 59.862 47.826 0.00 0.00 35.79 4.40
422 529 5.605488 ACTACTTATGTTACCCCCACTATGG 59.395 44.000 0.00 0.00 37.25 2.74
423 530 6.742559 ACTACTTATGTTACCCCCACTATG 57.257 41.667 0.00 0.00 0.00 2.23
424 531 8.236643 TGATACTACTTATGTTACCCCCACTAT 58.763 37.037 0.00 0.00 0.00 2.12
425 532 7.594570 TGATACTACTTATGTTACCCCCACTA 58.405 38.462 0.00 0.00 0.00 2.74
426 533 6.446451 TGATACTACTTATGTTACCCCCACT 58.554 40.000 0.00 0.00 0.00 4.00
427 534 6.736110 TGATACTACTTATGTTACCCCCAC 57.264 41.667 0.00 0.00 0.00 4.61
428 535 6.847567 ACATGATACTACTTATGTTACCCCCA 59.152 38.462 0.00 0.00 30.05 4.96
429 536 7.312415 ACATGATACTACTTATGTTACCCCC 57.688 40.000 0.00 0.00 30.05 5.40
430 537 9.086758 AGTACATGATACTACTTATGTTACCCC 57.913 37.037 0.00 0.00 35.55 4.95
435 542 9.209048 TCCCAAGTACATGATACTACTTATGTT 57.791 33.333 0.00 0.00 35.55 2.71
436 543 8.639761 GTCCCAAGTACATGATACTACTTATGT 58.360 37.037 0.00 0.00 37.51 2.29
437 544 8.861086 AGTCCCAAGTACATGATACTACTTATG 58.139 37.037 0.00 0.00 32.51 1.90
438 545 9.080097 GAGTCCCAAGTACATGATACTACTTAT 57.920 37.037 0.00 0.00 32.51 1.73
439 546 7.228108 CGAGTCCCAAGTACATGATACTACTTA 59.772 40.741 0.00 0.00 32.51 2.24
440 547 6.039493 CGAGTCCCAAGTACATGATACTACTT 59.961 42.308 0.00 0.00 34.19 2.24
441 548 5.531659 CGAGTCCCAAGTACATGATACTACT 59.468 44.000 0.00 4.34 0.00 2.57
442 549 5.298777 ACGAGTCCCAAGTACATGATACTAC 59.701 44.000 0.00 0.00 0.00 2.73
443 550 5.443283 ACGAGTCCCAAGTACATGATACTA 58.557 41.667 0.00 0.00 0.00 1.82
444 551 4.279145 ACGAGTCCCAAGTACATGATACT 58.721 43.478 0.00 2.60 0.00 2.12
445 552 4.650754 ACGAGTCCCAAGTACATGATAC 57.349 45.455 0.00 0.00 0.00 2.24
446 553 6.153170 TGTTTACGAGTCCCAAGTACATGATA 59.847 38.462 0.00 0.00 0.00 2.15
447 554 5.046878 TGTTTACGAGTCCCAAGTACATGAT 60.047 40.000 0.00 0.00 0.00 2.45
448 555 4.281435 TGTTTACGAGTCCCAAGTACATGA 59.719 41.667 0.00 0.00 0.00 3.07
449 556 4.562082 TGTTTACGAGTCCCAAGTACATG 58.438 43.478 0.00 0.00 0.00 3.21
450 557 4.877378 TGTTTACGAGTCCCAAGTACAT 57.123 40.909 0.00 0.00 0.00 2.29
451 558 4.562082 CATGTTTACGAGTCCCAAGTACA 58.438 43.478 0.00 0.00 0.00 2.90
452 559 3.370061 GCATGTTTACGAGTCCCAAGTAC 59.630 47.826 0.00 0.00 0.00 2.73
453 560 3.259876 AGCATGTTTACGAGTCCCAAGTA 59.740 43.478 0.00 0.00 0.00 2.24
454 561 2.038557 AGCATGTTTACGAGTCCCAAGT 59.961 45.455 0.00 0.00 0.00 3.16
455 562 2.699954 AGCATGTTTACGAGTCCCAAG 58.300 47.619 0.00 0.00 0.00 3.61
456 563 2.851263 AGCATGTTTACGAGTCCCAA 57.149 45.000 0.00 0.00 0.00 4.12
457 564 2.851263 AAGCATGTTTACGAGTCCCA 57.149 45.000 0.00 0.00 0.00 4.37
458 565 4.034048 CACATAAGCATGTTTACGAGTCCC 59.966 45.833 3.95 0.00 42.98 4.46
459 566 4.034048 CCACATAAGCATGTTTACGAGTCC 59.966 45.833 3.95 0.00 42.98 3.85
460 567 4.494199 GCCACATAAGCATGTTTACGAGTC 60.494 45.833 3.95 0.00 42.98 3.36
461 568 3.374058 GCCACATAAGCATGTTTACGAGT 59.626 43.478 3.95 1.72 42.98 4.18
462 569 3.373748 TGCCACATAAGCATGTTTACGAG 59.626 43.478 3.95 0.00 42.98 4.18
463 570 3.339141 TGCCACATAAGCATGTTTACGA 58.661 40.909 3.95 0.00 42.98 3.43
464 571 3.487376 CCTGCCACATAAGCATGTTTACG 60.487 47.826 3.95 0.00 42.98 3.18
465 572 3.734902 GCCTGCCACATAAGCATGTTTAC 60.735 47.826 3.95 0.00 42.98 2.01
466 573 2.426738 GCCTGCCACATAAGCATGTTTA 59.573 45.455 4.36 4.36 42.98 2.01
467 574 1.205417 GCCTGCCACATAAGCATGTTT 59.795 47.619 0.00 0.00 42.98 2.83
468 575 0.819582 GCCTGCCACATAAGCATGTT 59.180 50.000 0.00 0.00 42.98 2.71
469 576 0.323633 TGCCTGCCACATAAGCATGT 60.324 50.000 0.00 0.00 46.58 3.21
470 577 0.818938 TTGCCTGCCACATAAGCATG 59.181 50.000 0.00 0.00 40.04 4.06
471 578 1.784358 ATTGCCTGCCACATAAGCAT 58.216 45.000 0.00 0.00 40.04 3.79
472 579 1.559368 AATTGCCTGCCACATAAGCA 58.441 45.000 0.00 0.00 38.82 3.91
473 580 3.799281 TTAATTGCCTGCCACATAAGC 57.201 42.857 0.00 0.00 0.00 3.09
474 581 5.581126 TCTTTAATTGCCTGCCACATAAG 57.419 39.130 0.00 0.00 0.00 1.73
475 582 5.714333 TCTTCTTTAATTGCCTGCCACATAA 59.286 36.000 0.00 0.00 0.00 1.90
476 583 5.260424 TCTTCTTTAATTGCCTGCCACATA 58.740 37.500 0.00 0.00 0.00 2.29
477 584 4.088634 TCTTCTTTAATTGCCTGCCACAT 58.911 39.130 0.00 0.00 0.00 3.21
478 585 3.495331 TCTTCTTTAATTGCCTGCCACA 58.505 40.909 0.00 0.00 0.00 4.17
479 586 3.758554 TCTCTTCTTTAATTGCCTGCCAC 59.241 43.478 0.00 0.00 0.00 5.01
480 587 4.012374 CTCTCTTCTTTAATTGCCTGCCA 58.988 43.478 0.00 0.00 0.00 4.92
481 588 4.265073 TCTCTCTTCTTTAATTGCCTGCC 58.735 43.478 0.00 0.00 0.00 4.85
482 589 5.181748 TCTCTCTCTTCTTTAATTGCCTGC 58.818 41.667 0.00 0.00 0.00 4.85
483 590 6.260493 CCATCTCTCTCTTCTTTAATTGCCTG 59.740 42.308 0.00 0.00 0.00 4.85
484 591 6.069731 ACCATCTCTCTCTTCTTTAATTGCCT 60.070 38.462 0.00 0.00 0.00 4.75
485 592 6.118852 ACCATCTCTCTCTTCTTTAATTGCC 58.881 40.000 0.00 0.00 0.00 4.52
486 593 7.622893 AACCATCTCTCTCTTCTTTAATTGC 57.377 36.000 0.00 0.00 0.00 3.56
539 646 8.962884 TGACACACAGTAGCATCATATTTATT 57.037 30.769 0.00 0.00 0.00 1.40
540 647 8.996271 CATGACACACAGTAGCATCATATTTAT 58.004 33.333 0.00 0.00 0.00 1.40
541 648 7.041848 GCATGACACACAGTAGCATCATATTTA 60.042 37.037 0.00 0.00 0.00 1.40
542 649 6.238566 GCATGACACACAGTAGCATCATATTT 60.239 38.462 0.00 0.00 0.00 1.40
543 650 5.237996 GCATGACACACAGTAGCATCATATT 59.762 40.000 0.00 0.00 0.00 1.28
544 651 4.753610 GCATGACACACAGTAGCATCATAT 59.246 41.667 0.00 0.00 0.00 1.78
545 652 4.122046 GCATGACACACAGTAGCATCATA 58.878 43.478 0.00 0.00 0.00 2.15
546 653 2.941064 GCATGACACACAGTAGCATCAT 59.059 45.455 0.00 0.00 0.00 2.45
547 654 2.289569 TGCATGACACACAGTAGCATCA 60.290 45.455 0.00 0.00 32.66 3.07
548 655 2.349590 TGCATGACACACAGTAGCATC 58.650 47.619 0.00 0.00 32.66 3.91
549 656 2.477845 TGCATGACACACAGTAGCAT 57.522 45.000 0.00 0.00 32.66 3.79
550 657 2.078392 CATGCATGACACACAGTAGCA 58.922 47.619 22.59 0.00 38.40 3.49
551 658 1.399440 CCATGCATGACACACAGTAGC 59.601 52.381 28.31 0.00 0.00 3.58
552 659 1.399440 GCCATGCATGACACACAGTAG 59.601 52.381 28.31 8.01 0.00 2.57
553 660 1.271271 TGCCATGCATGACACACAGTA 60.271 47.619 28.31 5.91 31.71 2.74
554 661 0.537828 TGCCATGCATGACACACAGT 60.538 50.000 28.31 0.00 31.71 3.55
555 662 0.599060 TTGCCATGCATGACACACAG 59.401 50.000 28.31 10.23 38.76 3.66
556 663 1.258676 ATTGCCATGCATGACACACA 58.741 45.000 28.31 14.02 38.76 3.72
557 664 3.507103 TTATTGCCATGCATGACACAC 57.493 42.857 28.31 11.69 38.76 3.82
558 665 4.739587 ATTTATTGCCATGCATGACACA 57.260 36.364 28.31 18.81 38.76 3.72
559 666 7.401080 GTTTTATTTATTGCCATGCATGACAC 58.599 34.615 28.31 16.49 38.76 3.67
560 667 6.538021 GGTTTTATTTATTGCCATGCATGACA 59.462 34.615 28.31 20.53 38.76 3.58
561 668 6.538021 TGGTTTTATTTATTGCCATGCATGAC 59.462 34.615 28.31 17.77 38.76 3.06
562 669 6.647229 TGGTTTTATTTATTGCCATGCATGA 58.353 32.000 28.31 8.76 38.76 3.07
563 670 6.922247 TGGTTTTATTTATTGCCATGCATG 57.078 33.333 20.19 20.19 38.76 4.06
564 671 8.522542 AAATGGTTTTATTTATTGCCATGCAT 57.477 26.923 0.00 0.00 38.76 3.96
565 672 7.934855 AAATGGTTTTATTTATTGCCATGCA 57.065 28.000 0.00 0.00 36.89 3.96
566 673 9.881529 CATAAATGGTTTTATTTATTGCCATGC 57.118 29.630 0.00 0.00 39.81 4.06
642 749 9.750783 TGAGGAGTAACTTAGACTAGTAATGTT 57.249 33.333 0.00 4.96 0.00 2.71
643 750 9.176460 GTGAGGAGTAACTTAGACTAGTAATGT 57.824 37.037 0.00 0.00 0.00 2.71
644 751 9.398538 AGTGAGGAGTAACTTAGACTAGTAATG 57.601 37.037 0.00 0.00 0.00 1.90
648 755 8.770322 TCATAGTGAGGAGTAACTTAGACTAGT 58.230 37.037 0.00 0.00 0.00 2.57
649 756 9.048446 GTCATAGTGAGGAGTAACTTAGACTAG 57.952 40.741 0.00 0.00 31.58 2.57
650 757 7.992033 GGTCATAGTGAGGAGTAACTTAGACTA 59.008 40.741 0.00 0.00 33.27 2.59
651 758 6.829811 GGTCATAGTGAGGAGTAACTTAGACT 59.170 42.308 0.00 0.00 33.27 3.24
652 759 6.602406 TGGTCATAGTGAGGAGTAACTTAGAC 59.398 42.308 0.00 0.00 32.58 2.59
653 760 6.728411 TGGTCATAGTGAGGAGTAACTTAGA 58.272 40.000 0.00 0.00 0.00 2.10
654 761 6.460399 GCTGGTCATAGTGAGGAGTAACTTAG 60.460 46.154 0.00 0.00 0.00 2.18
655 762 5.360144 GCTGGTCATAGTGAGGAGTAACTTA 59.640 44.000 0.00 0.00 0.00 2.24
656 763 4.160626 GCTGGTCATAGTGAGGAGTAACTT 59.839 45.833 0.00 0.00 0.00 2.66
657 764 3.702045 GCTGGTCATAGTGAGGAGTAACT 59.298 47.826 0.00 0.00 0.00 2.24
658 765 3.181474 GGCTGGTCATAGTGAGGAGTAAC 60.181 52.174 0.00 0.00 0.00 2.50
659 766 3.031736 GGCTGGTCATAGTGAGGAGTAA 58.968 50.000 0.00 0.00 0.00 2.24
660 767 2.245028 AGGCTGGTCATAGTGAGGAGTA 59.755 50.000 0.00 0.00 0.00 2.59
661 768 1.007721 AGGCTGGTCATAGTGAGGAGT 59.992 52.381 0.00 0.00 0.00 3.85
662 769 1.686052 GAGGCTGGTCATAGTGAGGAG 59.314 57.143 0.00 0.00 0.00 3.69
663 770 1.007118 TGAGGCTGGTCATAGTGAGGA 59.993 52.381 0.00 0.00 0.00 3.71
664 771 1.411977 CTGAGGCTGGTCATAGTGAGG 59.588 57.143 0.00 0.00 0.00 3.86
665 772 2.382882 TCTGAGGCTGGTCATAGTGAG 58.617 52.381 0.00 0.00 0.00 3.51
666 773 2.532250 TCTGAGGCTGGTCATAGTGA 57.468 50.000 0.00 0.00 0.00 3.41
667 774 2.158986 CCTTCTGAGGCTGGTCATAGTG 60.159 54.545 0.00 0.00 35.94 2.74
668 775 2.114616 CCTTCTGAGGCTGGTCATAGT 58.885 52.381 0.00 0.00 35.94 2.12
669 776 2.392662 TCCTTCTGAGGCTGGTCATAG 58.607 52.381 0.00 0.00 43.21 2.23
670 777 2.550277 TCCTTCTGAGGCTGGTCATA 57.450 50.000 0.00 0.00 43.21 2.15
671 778 1.767681 GATCCTTCTGAGGCTGGTCAT 59.232 52.381 0.00 0.00 43.21 3.06
672 779 1.198713 GATCCTTCTGAGGCTGGTCA 58.801 55.000 0.00 0.00 43.21 4.02
673 780 1.198713 TGATCCTTCTGAGGCTGGTC 58.801 55.000 0.00 0.00 43.21 4.02
674 781 1.890552 ATGATCCTTCTGAGGCTGGT 58.109 50.000 0.00 0.00 43.21 4.00
675 782 2.172082 TCAATGATCCTTCTGAGGCTGG 59.828 50.000 0.00 0.00 43.21 4.85
676 783 3.555527 TCAATGATCCTTCTGAGGCTG 57.444 47.619 0.00 0.00 43.21 4.85
677 784 4.792513 ATTCAATGATCCTTCTGAGGCT 57.207 40.909 0.00 0.00 43.21 4.58
678 785 5.848833 AAATTCAATGATCCTTCTGAGGC 57.151 39.130 0.00 0.00 43.21 4.70
679 786 7.609056 ACAAAAATTCAATGATCCTTCTGAGG 58.391 34.615 0.00 0.00 45.02 3.86
680 787 9.784680 CTACAAAAATTCAATGATCCTTCTGAG 57.215 33.333 0.00 0.00 0.00 3.35
681 788 9.519191 TCTACAAAAATTCAATGATCCTTCTGA 57.481 29.630 0.00 0.00 0.00 3.27
682 789 9.565213 GTCTACAAAAATTCAATGATCCTTCTG 57.435 33.333 0.00 0.00 0.00 3.02
683 790 8.743714 GGTCTACAAAAATTCAATGATCCTTCT 58.256 33.333 0.00 0.00 0.00 2.85
684 791 8.522830 TGGTCTACAAAAATTCAATGATCCTTC 58.477 33.333 0.00 0.00 0.00 3.46
685 792 8.421249 TGGTCTACAAAAATTCAATGATCCTT 57.579 30.769 0.00 0.00 0.00 3.36
686 793 7.363268 GCTGGTCTACAAAAATTCAATGATCCT 60.363 37.037 0.00 0.00 0.00 3.24
707 814 2.502538 CCAATGAAAATGGATGGCTGGT 59.497 45.455 0.00 0.00 40.56 4.00
918 1027 0.033504 TCGGGACTTCAGAACAGCAC 59.966 55.000 0.00 0.00 0.00 4.40
972 1081 1.147824 CTGCCCTGCCCAGATAGTG 59.852 63.158 0.00 0.00 32.03 2.74
1231 1344 4.007644 CGTGACCTGGCTCCTGCA 62.008 66.667 0.00 0.00 41.91 4.41
1972 2088 3.493334 ACCGGTTGTATATCCTGATCGA 58.507 45.455 0.00 0.00 0.00 3.59
2551 2667 2.436469 CAGTGCTGCCATGGCGTA 60.436 61.111 30.87 21.39 45.51 4.42
2665 2793 5.195940 CACTTCCCTGTCCATTTGTATCAT 58.804 41.667 0.00 0.00 0.00 2.45
2701 2834 3.341823 ACTGATGGAGCAAAGCTAGTTG 58.658 45.455 0.00 0.00 39.88 3.16
2702 2835 3.710209 ACTGATGGAGCAAAGCTAGTT 57.290 42.857 0.00 0.00 39.88 2.24
2704 2837 2.606725 CGAACTGATGGAGCAAAGCTAG 59.393 50.000 0.00 0.00 39.88 3.42
2705 2838 2.621338 CGAACTGATGGAGCAAAGCTA 58.379 47.619 0.00 0.00 39.88 3.32
2706 2839 1.446907 CGAACTGATGGAGCAAAGCT 58.553 50.000 0.00 0.00 43.88 3.74
2708 2841 0.449388 GGCGAACTGATGGAGCAAAG 59.551 55.000 0.00 0.00 0.00 2.77
2710 2843 0.035152 ATGGCGAACTGATGGAGCAA 60.035 50.000 0.00 0.00 0.00 3.91
2712 2845 0.462581 TCATGGCGAACTGATGGAGC 60.463 55.000 0.00 0.00 0.00 4.70
2713 2846 1.134580 AGTCATGGCGAACTGATGGAG 60.135 52.381 0.00 0.00 0.00 3.86
2714 2847 0.904649 AGTCATGGCGAACTGATGGA 59.095 50.000 0.00 0.00 0.00 3.41
2715 2848 1.012086 CAGTCATGGCGAACTGATGG 58.988 55.000 6.45 0.00 32.38 3.51
2716 2849 0.376152 GCAGTCATGGCGAACTGATG 59.624 55.000 14.63 0.00 32.38 3.07
2717 2850 0.251354 AGCAGTCATGGCGAACTGAT 59.749 50.000 14.63 6.81 36.08 2.90
2718 2851 0.894835 TAGCAGTCATGGCGAACTGA 59.105 50.000 14.63 0.00 36.08 3.41
2719 2852 1.945387 ATAGCAGTCATGGCGAACTG 58.055 50.000 7.70 7.70 36.08 3.16
2720 2853 3.070159 ACATATAGCAGTCATGGCGAACT 59.930 43.478 0.00 0.00 36.08 3.01
2721 2854 3.185188 CACATATAGCAGTCATGGCGAAC 59.815 47.826 0.00 0.00 36.08 3.95
2722 2855 3.392882 CACATATAGCAGTCATGGCGAA 58.607 45.455 0.00 0.00 36.08 4.70
2723 2856 2.289010 CCACATATAGCAGTCATGGCGA 60.289 50.000 0.00 0.00 36.08 5.54
2724 2857 2.071540 CCACATATAGCAGTCATGGCG 58.928 52.381 0.00 0.00 36.08 5.69
2725 2858 3.070018 GTCCACATATAGCAGTCATGGC 58.930 50.000 0.00 0.00 0.00 4.40
2726 2859 3.243873 ACGTCCACATATAGCAGTCATGG 60.244 47.826 0.00 0.00 0.00 3.66
2727 2860 3.737774 CACGTCCACATATAGCAGTCATG 59.262 47.826 0.00 0.00 0.00 3.07
2728 2861 3.384789 ACACGTCCACATATAGCAGTCAT 59.615 43.478 0.00 0.00 0.00 3.06
2729 2862 2.758423 ACACGTCCACATATAGCAGTCA 59.242 45.455 0.00 0.00 0.00 3.41
2730 2863 3.116300 CACACGTCCACATATAGCAGTC 58.884 50.000 0.00 0.00 0.00 3.51
2731 2864 2.496070 ACACACGTCCACATATAGCAGT 59.504 45.455 0.00 0.00 0.00 4.40
2732 2865 2.860136 CACACACGTCCACATATAGCAG 59.140 50.000 0.00 0.00 0.00 4.24
2733 2866 2.887337 CACACACGTCCACATATAGCA 58.113 47.619 0.00 0.00 0.00 3.49
2734 2867 1.593006 GCACACACGTCCACATATAGC 59.407 52.381 0.00 0.00 0.00 2.97
2735 2868 2.860136 CTGCACACACGTCCACATATAG 59.140 50.000 0.00 0.00 0.00 1.31
2736 2869 2.494073 TCTGCACACACGTCCACATATA 59.506 45.455 0.00 0.00 0.00 0.86
2737 2870 1.275010 TCTGCACACACGTCCACATAT 59.725 47.619 0.00 0.00 0.00 1.78
2738 2871 0.676736 TCTGCACACACGTCCACATA 59.323 50.000 0.00 0.00 0.00 2.29
2739 2872 0.035317 ATCTGCACACACGTCCACAT 59.965 50.000 0.00 0.00 0.00 3.21
2740 2873 0.879839 CATCTGCACACACGTCCACA 60.880 55.000 0.00 0.00 0.00 4.17
2741 2874 0.599991 TCATCTGCACACACGTCCAC 60.600 55.000 0.00 0.00 0.00 4.02
2742 2875 0.319813 CTCATCTGCACACACGTCCA 60.320 55.000 0.00 0.00 0.00 4.02
2743 2876 1.630244 GCTCATCTGCACACACGTCC 61.630 60.000 0.00 0.00 0.00 4.79
2744 2877 0.668706 AGCTCATCTGCACACACGTC 60.669 55.000 0.00 0.00 34.99 4.34
2745 2878 0.668706 GAGCTCATCTGCACACACGT 60.669 55.000 9.40 0.00 34.99 4.49
2746 2879 0.389556 AGAGCTCATCTGCACACACG 60.390 55.000 17.77 0.00 36.69 4.49
2747 2880 1.357907 GAGAGCTCATCTGCACACAC 58.642 55.000 17.77 0.00 38.84 3.82
2748 2881 0.248565 GGAGAGCTCATCTGCACACA 59.751 55.000 17.77 0.00 45.30 3.72
2749 2882 0.805322 CGGAGAGCTCATCTGCACAC 60.805 60.000 17.77 0.00 46.25 3.82
2750 2883 1.253593 ACGGAGAGCTCATCTGCACA 61.254 55.000 17.77 0.00 46.25 4.57
2751 2884 0.805322 CACGGAGAGCTCATCTGCAC 60.805 60.000 17.77 0.00 46.25 4.57
2752 2885 1.253593 ACACGGAGAGCTCATCTGCA 61.254 55.000 17.77 0.00 46.25 4.41
2828 2961 4.444056 CCTTTTTGCGTTTATGGTGTTCAG 59.556 41.667 0.00 0.00 0.00 3.02
2829 2962 4.363999 CCTTTTTGCGTTTATGGTGTTCA 58.636 39.130 0.00 0.00 0.00 3.18
2857 2996 9.959721 TCCCATAAGGAAATCTTTATGTATAGC 57.040 33.333 18.33 0.00 43.78 2.97
2970 3115 0.108138 ACGTGGGTCTAGCATTGCTC 60.108 55.000 15.81 0.36 40.44 4.26
2971 3116 1.134788 GTACGTGGGTCTAGCATTGCT 60.135 52.381 16.63 16.63 43.41 3.91
2972 3117 1.287425 GTACGTGGGTCTAGCATTGC 58.713 55.000 0.00 0.00 0.00 3.56
2973 3118 2.094182 ACTGTACGTGGGTCTAGCATTG 60.094 50.000 0.00 0.00 0.00 2.82
2974 3119 2.176889 ACTGTACGTGGGTCTAGCATT 58.823 47.619 0.00 0.00 0.00 3.56
2975 3120 1.848652 ACTGTACGTGGGTCTAGCAT 58.151 50.000 0.00 0.00 0.00 3.79
2976 3121 1.624336 AACTGTACGTGGGTCTAGCA 58.376 50.000 0.00 0.00 0.00 3.49
2977 3122 2.476854 CGTAACTGTACGTGGGTCTAGC 60.477 54.545 0.00 0.00 46.49 3.42
2978 3123 3.395858 CGTAACTGTACGTGGGTCTAG 57.604 52.381 0.00 0.00 46.49 2.43
2988 3133 5.458779 ACGTAAAAACCTCACGTAACTGTAC 59.541 40.000 0.00 0.00 46.23 2.90
2989 3134 5.587289 ACGTAAAAACCTCACGTAACTGTA 58.413 37.500 0.00 0.00 46.23 2.74
2990 3135 4.432712 ACGTAAAAACCTCACGTAACTGT 58.567 39.130 0.00 0.00 46.23 3.55
2995 3140 5.695816 AGCATTTACGTAAAAACCTCACGTA 59.304 36.000 23.49 2.38 46.23 3.57
2997 3142 4.843984 CAGCATTTACGTAAAAACCTCACG 59.156 41.667 23.49 7.13 41.32 4.35
2998 3143 5.992729 TCAGCATTTACGTAAAAACCTCAC 58.007 37.500 23.49 8.89 0.00 3.51
2999 3144 6.811253 ATCAGCATTTACGTAAAAACCTCA 57.189 33.333 23.49 8.16 0.00 3.86
3000 3145 7.806014 TCAAATCAGCATTTACGTAAAAACCTC 59.194 33.333 23.49 11.24 30.51 3.85
3001 3146 7.653647 TCAAATCAGCATTTACGTAAAAACCT 58.346 30.769 23.49 16.13 30.51 3.50
3002 3147 7.861176 TCAAATCAGCATTTACGTAAAAACC 57.139 32.000 23.49 14.37 30.51 3.27
3003 3148 7.937294 CGTTCAAATCAGCATTTACGTAAAAAC 59.063 33.333 23.49 17.67 32.67 2.43
3004 3149 7.644551 ACGTTCAAATCAGCATTTACGTAAAAA 59.355 29.630 23.49 5.36 41.86 1.94
3005 3150 7.133513 ACGTTCAAATCAGCATTTACGTAAAA 58.866 30.769 23.49 8.23 41.86 1.52
3006 3151 6.660722 ACGTTCAAATCAGCATTTACGTAAA 58.339 32.000 22.12 22.12 41.86 2.01
3007 3152 6.230849 ACGTTCAAATCAGCATTTACGTAA 57.769 33.333 3.29 3.29 41.86 3.18
3008 3153 5.849357 ACGTTCAAATCAGCATTTACGTA 57.151 34.783 8.06 0.00 41.86 3.57
3009 3154 4.742438 ACGTTCAAATCAGCATTTACGT 57.258 36.364 0.00 0.00 40.18 3.57
3010 3155 7.719689 AATTACGTTCAAATCAGCATTTACG 57.280 32.000 0.00 0.00 38.83 3.18
3014 3159 9.086336 CCAATTAATTACGTTCAAATCAGCATT 57.914 29.630 0.00 0.00 0.00 3.56
3015 3160 8.250332 ACCAATTAATTACGTTCAAATCAGCAT 58.750 29.630 0.00 0.00 0.00 3.79
3016 3161 7.598278 ACCAATTAATTACGTTCAAATCAGCA 58.402 30.769 0.00 0.00 0.00 4.41
3017 3162 8.460831 AACCAATTAATTACGTTCAAATCAGC 57.539 30.769 0.00 0.00 0.00 4.26
3029 3174 9.961265 GCCACTAATCCTAAACCAATTAATTAC 57.039 33.333 0.00 0.00 0.00 1.89
3030 3175 9.930158 AGCCACTAATCCTAAACCAATTAATTA 57.070 29.630 0.00 0.00 0.00 1.40
3031 3176 8.695456 CAGCCACTAATCCTAAACCAATTAATT 58.305 33.333 0.00 0.00 0.00 1.40
3032 3177 7.287696 CCAGCCACTAATCCTAAACCAATTAAT 59.712 37.037 0.00 0.00 0.00 1.40
3033 3178 6.605594 CCAGCCACTAATCCTAAACCAATTAA 59.394 38.462 0.00 0.00 0.00 1.40
3034 3179 6.069323 TCCAGCCACTAATCCTAAACCAATTA 60.069 38.462 0.00 0.00 0.00 1.40
3035 3180 4.956075 CCAGCCACTAATCCTAAACCAATT 59.044 41.667 0.00 0.00 0.00 2.32
3036 3181 4.229582 TCCAGCCACTAATCCTAAACCAAT 59.770 41.667 0.00 0.00 0.00 3.16
3037 3182 3.589735 TCCAGCCACTAATCCTAAACCAA 59.410 43.478 0.00 0.00 0.00 3.67
3038 3183 3.186283 TCCAGCCACTAATCCTAAACCA 58.814 45.455 0.00 0.00 0.00 3.67
3039 3184 3.809905 CTCCAGCCACTAATCCTAAACC 58.190 50.000 0.00 0.00 0.00 3.27
3040 3185 3.206964 GCTCCAGCCACTAATCCTAAAC 58.793 50.000 0.00 0.00 34.31 2.01
3041 3186 3.560636 GCTCCAGCCACTAATCCTAAA 57.439 47.619 0.00 0.00 34.31 1.85
3056 3201 4.660611 TAACCGGGGTGGGCTCCA 62.661 66.667 6.32 0.00 44.64 3.86
3057 3202 2.429235 TTTTAACCGGGGTGGGCTCC 62.429 60.000 6.32 0.00 44.64 4.70
3058 3203 0.323999 ATTTTAACCGGGGTGGGCTC 60.324 55.000 6.32 0.00 44.64 4.70
3059 3204 0.323999 GATTTTAACCGGGGTGGGCT 60.324 55.000 6.32 0.00 44.64 5.19
3060 3205 0.612453 TGATTTTAACCGGGGTGGGC 60.612 55.000 6.32 0.00 44.64 5.36
3061 3206 1.470051 CTGATTTTAACCGGGGTGGG 58.530 55.000 6.32 0.00 44.64 4.61
3062 3207 1.470051 CCTGATTTTAACCGGGGTGG 58.530 55.000 6.32 0.00 46.41 4.61
3063 3208 1.470051 CCCTGATTTTAACCGGGGTG 58.530 55.000 6.32 0.00 42.72 4.61
3064 3209 3.991972 CCCTGATTTTAACCGGGGT 57.008 52.632 6.32 0.00 42.72 4.95
3066 3211 3.200918 CCCCCTGATTTTAACCGGG 57.799 57.895 6.32 0.00 34.62 5.73
3082 3227 2.111972 TCCATACATACTCTCCTCCCCC 59.888 54.545 0.00 0.00 0.00 5.40
3083 3228 3.544698 TCCATACATACTCTCCTCCCC 57.455 52.381 0.00 0.00 0.00 4.81
3084 3229 3.835395 CCTTCCATACATACTCTCCTCCC 59.165 52.174 0.00 0.00 0.00 4.30
3085 3230 3.835395 CCCTTCCATACATACTCTCCTCC 59.165 52.174 0.00 0.00 0.00 4.30
3086 3231 4.484912 ACCCTTCCATACATACTCTCCTC 58.515 47.826 0.00 0.00 0.00 3.71
3087 3232 4.561254 ACCCTTCCATACATACTCTCCT 57.439 45.455 0.00 0.00 0.00 3.69
3088 3233 4.217983 CGTACCCTTCCATACATACTCTCC 59.782 50.000 0.00 0.00 0.00 3.71
3089 3234 4.826183 ACGTACCCTTCCATACATACTCTC 59.174 45.833 0.00 0.00 0.00 3.20
3090 3235 4.801164 ACGTACCCTTCCATACATACTCT 58.199 43.478 0.00 0.00 0.00 3.24
3091 3236 6.488006 TCTTACGTACCCTTCCATACATACTC 59.512 42.308 0.00 0.00 0.00 2.59
3092 3237 6.367983 TCTTACGTACCCTTCCATACATACT 58.632 40.000 0.00 0.00 0.00 2.12
3093 3238 6.639632 TCTTACGTACCCTTCCATACATAC 57.360 41.667 0.00 0.00 0.00 2.39
3094 3239 7.844493 AATCTTACGTACCCTTCCATACATA 57.156 36.000 0.00 0.00 0.00 2.29
3095 3240 6.742559 AATCTTACGTACCCTTCCATACAT 57.257 37.500 0.00 0.00 0.00 2.29
3096 3241 7.288389 ACATAATCTTACGTACCCTTCCATACA 59.712 37.037 0.00 0.00 0.00 2.29
3097 3242 7.664758 ACATAATCTTACGTACCCTTCCATAC 58.335 38.462 0.00 0.00 0.00 2.39
3098 3243 7.844493 ACATAATCTTACGTACCCTTCCATA 57.156 36.000 0.00 0.00 0.00 2.74
3099 3244 6.742559 ACATAATCTTACGTACCCTTCCAT 57.257 37.500 0.00 0.00 0.00 3.41
3100 3245 6.266103 CCTACATAATCTTACGTACCCTTCCA 59.734 42.308 0.00 0.00 0.00 3.53
3101 3246 6.491403 TCCTACATAATCTTACGTACCCTTCC 59.509 42.308 0.00 0.00 0.00 3.46
3102 3247 7.516198 TCCTACATAATCTTACGTACCCTTC 57.484 40.000 0.00 0.00 0.00 3.46
3103 3248 7.949006 AGATCCTACATAATCTTACGTACCCTT 59.051 37.037 0.00 0.00 0.00 3.95
3104 3249 7.468496 AGATCCTACATAATCTTACGTACCCT 58.532 38.462 0.00 0.00 0.00 4.34
3105 3250 7.700022 AGATCCTACATAATCTTACGTACCC 57.300 40.000 0.00 0.00 0.00 3.69
3106 3251 9.978044 AAAAGATCCTACATAATCTTACGTACC 57.022 33.333 0.00 0.00 40.47 3.34
3108 3253 9.888878 CGAAAAGATCCTACATAATCTTACGTA 57.111 33.333 0.00 0.00 40.47 3.57
3109 3254 8.411683 ACGAAAAGATCCTACATAATCTTACGT 58.588 33.333 16.60 16.60 42.72 3.57
3110 3255 8.798748 ACGAAAAGATCCTACATAATCTTACG 57.201 34.615 15.79 15.79 40.47 3.18
3113 3258 8.925338 ACCTACGAAAAGATCCTACATAATCTT 58.075 33.333 0.00 0.00 42.56 2.40
3114 3259 8.361139 CACCTACGAAAAGATCCTACATAATCT 58.639 37.037 0.00 0.00 33.67 2.40
3115 3260 8.142551 ACACCTACGAAAAGATCCTACATAATC 58.857 37.037 0.00 0.00 0.00 1.75
3116 3261 8.019656 ACACCTACGAAAAGATCCTACATAAT 57.980 34.615 0.00 0.00 0.00 1.28
3117 3262 7.414222 ACACCTACGAAAAGATCCTACATAA 57.586 36.000 0.00 0.00 0.00 1.90
3118 3263 7.994911 TCTACACCTACGAAAAGATCCTACATA 59.005 37.037 0.00 0.00 0.00 2.29
3119 3264 5.934402 ACACCTACGAAAAGATCCTACAT 57.066 39.130 0.00 0.00 0.00 2.29
3120 3265 6.182627 TCTACACCTACGAAAAGATCCTACA 58.817 40.000 0.00 0.00 0.00 2.74
3121 3266 6.690194 TCTACACCTACGAAAAGATCCTAC 57.310 41.667 0.00 0.00 0.00 3.18
3122 3267 7.893124 ATTCTACACCTACGAAAAGATCCTA 57.107 36.000 0.00 0.00 0.00 2.94
3123 3268 6.793505 ATTCTACACCTACGAAAAGATCCT 57.206 37.500 0.00 0.00 0.00 3.24
3124 3269 9.194271 GATAATTCTACACCTACGAAAAGATCC 57.806 37.037 0.00 0.00 0.00 3.36
3125 3270 9.745880 TGATAATTCTACACCTACGAAAAGATC 57.254 33.333 0.00 0.00 0.00 2.75
3126 3271 9.530633 GTGATAATTCTACACCTACGAAAAGAT 57.469 33.333 0.00 0.00 0.00 2.40
3127 3272 8.525316 TGTGATAATTCTACACCTACGAAAAGA 58.475 33.333 0.00 0.00 34.18 2.52
3128 3273 8.697846 TGTGATAATTCTACACCTACGAAAAG 57.302 34.615 0.00 0.00 34.18 2.27
3129 3274 9.491675 TTTGTGATAATTCTACACCTACGAAAA 57.508 29.630 0.00 0.00 34.18 2.29
3130 3275 9.661563 ATTTGTGATAATTCTACACCTACGAAA 57.338 29.630 0.00 0.00 34.18 3.46
3131 3276 9.661563 AATTTGTGATAATTCTACACCTACGAA 57.338 29.630 0.00 0.00 34.18 3.85
3132 3277 9.661563 AAATTTGTGATAATTCTACACCTACGA 57.338 29.630 0.00 0.00 34.18 3.43
3147 3292 9.958180 TCAGAGGAAGTGATAAAATTTGTGATA 57.042 29.630 0.00 0.00 0.00 2.15
3148 3293 8.868522 TCAGAGGAAGTGATAAAATTTGTGAT 57.131 30.769 0.00 0.00 0.00 3.06
3149 3294 8.567948 GTTCAGAGGAAGTGATAAAATTTGTGA 58.432 33.333 0.00 0.00 32.62 3.58
3150 3295 7.809806 GGTTCAGAGGAAGTGATAAAATTTGTG 59.190 37.037 0.00 0.00 32.62 3.33
3151 3296 7.308589 CGGTTCAGAGGAAGTGATAAAATTTGT 60.309 37.037 0.00 0.00 32.62 2.83
3152 3297 7.023575 CGGTTCAGAGGAAGTGATAAAATTTG 58.976 38.462 0.00 0.00 32.62 2.32
3153 3298 6.715264 ACGGTTCAGAGGAAGTGATAAAATTT 59.285 34.615 0.00 0.00 32.62 1.82
3154 3299 6.238648 ACGGTTCAGAGGAAGTGATAAAATT 58.761 36.000 0.00 0.00 32.62 1.82
3155 3300 5.805728 ACGGTTCAGAGGAAGTGATAAAAT 58.194 37.500 0.00 0.00 32.62 1.82
3156 3301 5.223449 ACGGTTCAGAGGAAGTGATAAAA 57.777 39.130 0.00 0.00 32.62 1.52
3157 3302 4.884668 ACGGTTCAGAGGAAGTGATAAA 57.115 40.909 0.00 0.00 32.62 1.40
3158 3303 4.566004 CAACGGTTCAGAGGAAGTGATAA 58.434 43.478 0.00 0.00 32.62 1.75
3159 3304 3.616560 GCAACGGTTCAGAGGAAGTGATA 60.617 47.826 0.00 0.00 32.62 2.15
3160 3305 2.872038 GCAACGGTTCAGAGGAAGTGAT 60.872 50.000 0.00 0.00 32.62 3.06
3190 3335 1.802365 ACGTTCCATGCGGTACTTTTC 59.198 47.619 0.00 0.00 30.59 2.29
3191 3336 1.886886 ACGTTCCATGCGGTACTTTT 58.113 45.000 0.00 0.00 30.59 2.27
3213 3358 4.184079 GGATATGCCTGGCAAATCATTC 57.816 45.455 27.24 14.80 43.62 2.67
3268 3420 0.547712 TAGCTTGGAGGGCTTCAGGT 60.548 55.000 0.00 0.00 40.74 4.00
3288 3440 2.142357 CTGGTTCGACTCTCCACGCA 62.142 60.000 0.00 0.00 0.00 5.24
3331 3483 4.824289 CGTTATAGTTGGGTGGTTACTGT 58.176 43.478 0.00 0.00 0.00 3.55
3347 3499 8.542497 AGAAGTTATCACAACAAAGCGTTATA 57.458 30.769 0.00 0.00 35.52 0.98
3442 3594 6.341316 TCACCGATTTTGGAAAAATTTCACA 58.659 32.000 8.06 1.61 38.92 3.58
3448 3600 7.800155 AACATTTCACCGATTTTGGAAAAAT 57.200 28.000 0.00 0.00 33.47 1.82
3453 3605 7.265673 TGTAAAAACATTTCACCGATTTTGGA 58.734 30.769 0.00 0.00 0.00 3.53


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.