Multiple sequence alignment - TraesCS4D01G187300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G187300 chr4D 100.000 2597 0 0 1 2597 326250554 326247958 0.000000e+00 4796.0
1 TraesCS4D01G187300 chr4B 93.523 1266 62 14 440 1689 406347422 406346161 0.000000e+00 1866.0
2 TraesCS4D01G187300 chr4B 93.791 306 15 4 124 428 406348002 406347700 8.470000e-125 457.0
3 TraesCS4D01G187300 chr4B 92.982 171 10 2 1766 1935 406345794 406345625 5.550000e-62 248.0
4 TraesCS4D01G187300 chr4B 95.745 47 2 0 2065 2111 553536284 553536238 2.770000e-10 76.8
5 TraesCS4D01G187300 chr4A 92.294 1116 49 13 571 1667 144643449 144644546 0.000000e+00 1550.0
6 TraesCS4D01G187300 chr4A 90.201 398 25 10 140 535 144643072 144643457 8.290000e-140 507.0
7 TraesCS4D01G187300 chr4A 90.909 121 8 3 1 121 190835401 190835284 2.670000e-35 159.0
8 TraesCS4D01G187300 chr3B 80.180 444 64 15 1955 2395 771635055 771634633 6.980000e-81 311.0
9 TraesCS4D01G187300 chr7D 81.381 333 48 9 1953 2278 477640261 477640586 2.560000e-65 259.0
10 TraesCS4D01G187300 chr2D 77.657 461 56 24 1953 2390 603723833 603724269 1.200000e-58 237.0
11 TraesCS4D01G187300 chr2D 88.889 126 11 3 1 126 68865126 68865248 4.480000e-33 152.0
12 TraesCS4D01G187300 chr5D 90.984 122 10 1 1 121 386086952 386087073 2.070000e-36 163.0
13 TraesCS4D01G187300 chr6A 89.431 123 12 1 1 123 537876385 537876264 1.240000e-33 154.0
14 TraesCS4D01G187300 chr2B 88.889 126 12 2 1 125 209151052 209150928 1.240000e-33 154.0
15 TraesCS4D01G187300 chr1D 89.431 123 11 2 1 123 411118065 411118185 1.240000e-33 154.0
16 TraesCS4D01G187300 chrUn 88.889 126 10 3 1 125 278466033 278465911 4.480000e-33 152.0
17 TraesCS4D01G187300 chrUn 88.889 126 10 3 1 125 278473294 278473172 4.480000e-33 152.0
18 TraesCS4D01G187300 chr7A 87.786 131 11 4 1 130 704643240 704643366 5.790000e-32 148.0
19 TraesCS4D01G187300 chr7B 82.390 159 21 6 1993 2149 47981113 47980960 5.830000e-27 132.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G187300 chr4D 326247958 326250554 2596 True 4796.0 4796 100.0000 1 2597 1 chr4D.!!$R1 2596
1 TraesCS4D01G187300 chr4B 406345625 406348002 2377 True 857.0 1866 93.4320 124 1935 3 chr4B.!!$R2 1811
2 TraesCS4D01G187300 chr4A 144643072 144644546 1474 False 1028.5 1550 91.2475 140 1667 2 chr4A.!!$F1 1527

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
634 912 0.379316 AAACTGAACCCACGAAACGC 59.621 50.0 0.0 0.0 0.0 4.84 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1972 2592 0.03601 CTCGGTTGCTCAATCCACCT 60.036 55.0 0.0 0.0 0.0 4.0 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
68 69 9.442047 AAAAATAGAACACAAACAAAATGGACA 57.558 25.926 0.00 0.00 0.00 4.02
69 70 9.612066 AAAATAGAACACAAACAAAATGGACAT 57.388 25.926 0.00 0.00 0.00 3.06
70 71 8.816640 AATAGAACACAAACAAAATGGACATC 57.183 30.769 0.00 0.00 0.00 3.06
71 72 6.219417 AGAACACAAACAAAATGGACATCA 57.781 33.333 0.00 0.00 0.00 3.07
72 73 6.275335 AGAACACAAACAAAATGGACATCAG 58.725 36.000 0.00 0.00 0.00 2.90
73 74 5.596836 ACACAAACAAAATGGACATCAGT 57.403 34.783 0.00 0.00 0.00 3.41
74 75 5.976458 ACACAAACAAAATGGACATCAGTT 58.024 33.333 0.00 0.00 34.90 3.16
75 76 6.405538 ACACAAACAAAATGGACATCAGTTT 58.594 32.000 0.00 0.00 43.39 2.66
76 77 7.551585 ACACAAACAAAATGGACATCAGTTTA 58.448 30.769 8.40 0.00 41.06 2.01
77 78 7.706179 ACACAAACAAAATGGACATCAGTTTAG 59.294 33.333 8.40 7.60 41.06 1.85
78 79 7.920151 CACAAACAAAATGGACATCAGTTTAGA 59.080 33.333 8.40 0.00 41.06 2.10
79 80 8.641541 ACAAACAAAATGGACATCAGTTTAGAT 58.358 29.630 8.40 0.00 41.06 1.98
92 93 8.858003 CATCAGTTTAGATGTGACGTAACTAT 57.142 34.615 4.30 0.00 40.35 2.12
93 94 8.746751 CATCAGTTTAGATGTGACGTAACTATG 58.253 37.037 4.30 2.77 40.35 2.23
94 95 7.823665 TCAGTTTAGATGTGACGTAACTATGT 58.176 34.615 4.30 0.00 0.00 2.29
95 96 7.966753 TCAGTTTAGATGTGACGTAACTATGTC 59.033 37.037 4.30 2.66 41.45 3.06
96 97 7.753580 CAGTTTAGATGTGACGTAACTATGTCA 59.246 37.037 4.30 7.54 46.66 3.58
105 106 7.803279 TGACGTAACTATGTCACATCTAGAT 57.197 36.000 7.54 0.00 44.70 1.98
106 107 7.639945 TGACGTAACTATGTCACATCTAGATG 58.360 38.462 27.63 27.63 44.70 2.90
214 215 0.467290 AACTTTGCACACCGGTCCAT 60.467 50.000 2.59 0.00 0.00 3.41
219 220 1.599518 GCACACCGGTCCATGAACA 60.600 57.895 2.59 0.00 0.00 3.18
244 245 1.271379 CGGTGTTGGATTTGAGGGTCT 60.271 52.381 0.00 0.00 0.00 3.85
388 390 2.808244 CTTTGTCTGCGCCAAGAAAAA 58.192 42.857 4.18 8.93 33.35 1.94
428 430 1.600013 TGCAACAAAACGTAGCACGAT 59.400 42.857 14.18 1.30 46.05 3.73
429 431 2.032302 TGCAACAAAACGTAGCACGATT 59.968 40.909 14.18 6.96 46.05 3.34
430 432 2.400408 GCAACAAAACGTAGCACGATTG 59.600 45.455 14.18 17.17 46.05 2.67
447 449 2.870372 GCACGAAGCACCATGGAC 59.130 61.111 21.47 10.28 44.79 4.02
461 463 2.097466 CCATGGACAGCACGTAAATTCC 59.903 50.000 5.56 0.00 0.00 3.01
462 739 2.851263 TGGACAGCACGTAAATTCCT 57.149 45.000 0.00 0.00 0.00 3.36
485 762 3.364964 CGCCAAAAGAAGCACGTAAATCT 60.365 43.478 0.00 0.00 0.00 2.40
506 783 0.398318 GCAGGTCCCAGTCTTCACTT 59.602 55.000 0.00 0.00 0.00 3.16
549 826 4.170292 TCGGCAGAGAAACAGTAAGTAC 57.830 45.455 0.00 0.00 0.00 2.73
592 870 0.908198 TGGCAGGCAAAACAAAACCT 59.092 45.000 0.00 0.00 0.00 3.50
634 912 0.379316 AAACTGAACCCACGAAACGC 59.621 50.000 0.00 0.00 0.00 4.84
636 914 2.592287 TGAACCCACGAAACGCCC 60.592 61.111 0.00 0.00 0.00 6.13
637 915 3.359523 GAACCCACGAAACGCCCC 61.360 66.667 0.00 0.00 0.00 5.80
741 1022 4.602259 CCACACCACACGACCGCT 62.602 66.667 0.00 0.00 0.00 5.52
742 1023 3.036084 CACACCACACGACCGCTC 61.036 66.667 0.00 0.00 0.00 5.03
744 1025 1.900016 ACACCACACGACCGCTCTA 60.900 57.895 0.00 0.00 0.00 2.43
769 1065 2.268280 CCTCCAGCTCTGTGCCAG 59.732 66.667 0.00 0.00 44.23 4.85
798 1094 2.952291 AAGCAGCCAAACAAACGCGG 62.952 55.000 12.47 0.00 0.00 6.46
827 1123 4.838486 CTCTCACGTCGCGCTCCC 62.838 72.222 5.56 0.00 0.00 4.30
915 1211 1.070445 CCCCGCTCATCTCATCACC 59.930 63.158 0.00 0.00 0.00 4.02
937 1240 5.418209 ACCAACTTAGTGTAGTAGAAGCGAT 59.582 40.000 0.00 0.00 0.00 4.58
972 1275 2.924105 GCAGCAAGCAACAGGGGAC 61.924 63.158 0.00 0.00 44.79 4.46
983 1286 1.227674 CAGGGGACGCTGCTATTCC 60.228 63.158 3.37 0.57 0.00 3.01
991 1294 1.883084 GCTGCTATTCCGGTGGACG 60.883 63.158 0.00 0.00 43.80 4.79
1197 1500 0.252197 TCTCCATCGACGAGACTCCA 59.748 55.000 9.44 0.00 31.39 3.86
1290 1593 1.975407 CCCCGACGACTACAGTGGT 60.975 63.158 0.00 0.00 39.70 4.16
1556 1859 2.588314 GCAGCGGCAGATCTCCTG 60.588 66.667 3.18 0.00 45.67 3.86
1643 1947 6.898041 TGACACTTCAAACATCCTTTATTCG 58.102 36.000 0.00 0.00 0.00 3.34
1646 1950 8.385898 ACACTTCAAACATCCTTTATTCGTTA 57.614 30.769 0.00 0.00 0.00 3.18
1744 2048 9.140286 ACCGTATGATATAGACATCAAAATTCG 57.860 33.333 0.00 0.00 38.39 3.34
1812 2432 4.436998 CACGCGAGGGGTCCAGTC 62.437 72.222 15.93 0.00 0.00 3.51
1823 2443 1.368850 GTCCAGTCGTTGCGTTTGC 60.369 57.895 0.00 0.00 43.20 3.68
1846 2466 2.029518 CTCAGCGTGGTCACAGCA 59.970 61.111 15.76 0.00 34.80 4.41
1852 2472 1.009675 CGTGGTCACAGCAACAAGC 60.010 57.895 1.90 0.00 46.19 4.01
1939 2559 7.924103 AGTTCGTAAACTTTTTAAATGCCAG 57.076 32.000 0.00 0.00 43.28 4.85
1940 2560 6.419710 AGTTCGTAAACTTTTTAAATGCCAGC 59.580 34.615 0.00 0.00 43.28 4.85
1941 2561 4.912766 TCGTAAACTTTTTAAATGCCAGCG 59.087 37.500 0.00 0.00 0.00 5.18
1942 2562 4.089351 CGTAAACTTTTTAAATGCCAGCGG 59.911 41.667 0.00 0.00 0.00 5.52
1943 2563 4.329462 AAACTTTTTAAATGCCAGCGGA 57.671 36.364 0.00 0.00 0.00 5.54
1944 2564 4.535526 AACTTTTTAAATGCCAGCGGAT 57.464 36.364 0.00 0.00 0.00 4.18
1945 2565 4.110036 ACTTTTTAAATGCCAGCGGATC 57.890 40.909 0.00 0.00 0.00 3.36
1946 2566 3.763897 ACTTTTTAAATGCCAGCGGATCT 59.236 39.130 0.00 0.00 0.00 2.75
1947 2567 4.220602 ACTTTTTAAATGCCAGCGGATCTT 59.779 37.500 0.00 0.00 0.00 2.40
1948 2568 4.799564 TTTTAAATGCCAGCGGATCTTT 57.200 36.364 0.00 0.00 0.00 2.52
1949 2569 4.799564 TTTAAATGCCAGCGGATCTTTT 57.200 36.364 0.00 0.00 0.00 2.27
1950 2570 5.906113 TTTAAATGCCAGCGGATCTTTTA 57.094 34.783 0.00 0.00 0.00 1.52
1951 2571 5.906113 TTAAATGCCAGCGGATCTTTTAA 57.094 34.783 0.00 3.34 0.00 1.52
1952 2572 4.376340 AAATGCCAGCGGATCTTTTAAG 57.624 40.909 0.00 0.00 0.00 1.85
1953 2573 1.750193 TGCCAGCGGATCTTTTAAGG 58.250 50.000 0.00 0.00 0.00 2.69
1954 2574 0.382158 GCCAGCGGATCTTTTAAGGC 59.618 55.000 0.00 0.00 0.00 4.35
1955 2575 2.019156 GCCAGCGGATCTTTTAAGGCT 61.019 52.381 0.00 0.00 37.89 4.58
1956 2576 1.943340 CCAGCGGATCTTTTAAGGCTC 59.057 52.381 0.00 0.00 0.00 4.70
1957 2577 1.594862 CAGCGGATCTTTTAAGGCTCG 59.405 52.381 0.00 0.00 0.00 5.03
1958 2578 0.305009 GCGGATCTTTTAAGGCTCGC 59.695 55.000 0.00 0.00 33.68 5.03
1959 2579 0.577269 CGGATCTTTTAAGGCTCGCG 59.423 55.000 0.00 0.00 0.00 5.87
1960 2580 1.801395 CGGATCTTTTAAGGCTCGCGA 60.801 52.381 9.26 9.26 0.00 5.87
1961 2581 1.861575 GGATCTTTTAAGGCTCGCGAG 59.138 52.381 31.37 31.37 0.00 5.03
1975 2595 3.133014 CGAGCCATCGGATCAGGT 58.867 61.111 0.00 0.00 45.39 4.00
1976 2596 1.300465 CGAGCCATCGGATCAGGTG 60.300 63.158 0.00 0.00 45.39 4.00
1977 2597 1.070445 GAGCCATCGGATCAGGTGG 59.930 63.158 19.78 19.78 38.12 4.61
1978 2598 1.383109 AGCCATCGGATCAGGTGGA 60.383 57.895 27.10 0.98 33.53 4.02
1979 2599 0.765903 AGCCATCGGATCAGGTGGAT 60.766 55.000 27.10 19.44 39.53 3.41
1980 2600 0.109342 GCCATCGGATCAGGTGGATT 59.891 55.000 27.10 0.00 36.00 3.01
1981 2601 1.888215 CCATCGGATCAGGTGGATTG 58.112 55.000 19.43 0.00 36.00 2.67
1982 2602 1.417517 CCATCGGATCAGGTGGATTGA 59.582 52.381 19.43 0.00 36.00 2.57
1983 2603 2.549563 CCATCGGATCAGGTGGATTGAG 60.550 54.545 19.43 0.00 36.00 3.02
1984 2604 0.465705 TCGGATCAGGTGGATTGAGC 59.534 55.000 0.00 0.00 36.00 4.26
1985 2605 0.178767 CGGATCAGGTGGATTGAGCA 59.821 55.000 0.00 0.00 36.00 4.26
1986 2606 1.407299 CGGATCAGGTGGATTGAGCAA 60.407 52.381 0.00 0.00 36.00 3.91
1987 2607 2.019984 GGATCAGGTGGATTGAGCAAC 58.980 52.381 0.00 0.00 36.00 4.17
1988 2608 2.019984 GATCAGGTGGATTGAGCAACC 58.980 52.381 0.00 0.00 36.00 3.77
1989 2609 0.321564 TCAGGTGGATTGAGCAACCG 60.322 55.000 0.00 0.00 37.78 4.44
1990 2610 0.321564 CAGGTGGATTGAGCAACCGA 60.322 55.000 0.00 0.00 37.78 4.69
1991 2611 0.036010 AGGTGGATTGAGCAACCGAG 60.036 55.000 0.00 0.00 37.78 4.63
1992 2612 1.648467 GGTGGATTGAGCAACCGAGC 61.648 60.000 0.00 0.00 0.00 5.03
1993 2613 1.741401 TGGATTGAGCAACCGAGCG 60.741 57.895 0.00 0.00 40.15 5.03
1994 2614 1.741770 GGATTGAGCAACCGAGCGT 60.742 57.895 0.00 0.00 40.15 5.07
1995 2615 1.696832 GGATTGAGCAACCGAGCGTC 61.697 60.000 0.00 0.00 40.15 5.19
1996 2616 1.005037 ATTGAGCAACCGAGCGTCA 60.005 52.632 0.00 0.00 40.15 4.35
1997 2617 1.291877 ATTGAGCAACCGAGCGTCAC 61.292 55.000 0.00 0.00 40.15 3.67
1998 2618 2.049063 GAGCAACCGAGCGTCACT 60.049 61.111 0.00 0.00 40.15 3.41
1999 2619 1.664965 GAGCAACCGAGCGTCACTT 60.665 57.895 0.00 0.00 40.15 3.16
2000 2620 1.222115 GAGCAACCGAGCGTCACTTT 61.222 55.000 0.00 0.00 40.15 2.66
2001 2621 1.204312 GCAACCGAGCGTCACTTTC 59.796 57.895 0.00 0.00 0.00 2.62
2002 2622 1.222115 GCAACCGAGCGTCACTTTCT 61.222 55.000 0.00 0.00 0.00 2.52
2003 2623 1.933500 GCAACCGAGCGTCACTTTCTA 60.934 52.381 0.00 0.00 0.00 2.10
2004 2624 2.607187 CAACCGAGCGTCACTTTCTAT 58.393 47.619 0.00 0.00 0.00 1.98
2005 2625 2.563471 ACCGAGCGTCACTTTCTATC 57.437 50.000 0.00 0.00 0.00 2.08
2006 2626 1.816835 ACCGAGCGTCACTTTCTATCA 59.183 47.619 0.00 0.00 0.00 2.15
2007 2627 2.427453 ACCGAGCGTCACTTTCTATCAT 59.573 45.455 0.00 0.00 0.00 2.45
2008 2628 3.119101 ACCGAGCGTCACTTTCTATCATT 60.119 43.478 0.00 0.00 0.00 2.57
2009 2629 3.243877 CCGAGCGTCACTTTCTATCATTG 59.756 47.826 0.00 0.00 0.00 2.82
2010 2630 3.859961 CGAGCGTCACTTTCTATCATTGT 59.140 43.478 0.00 0.00 0.00 2.71
2011 2631 5.034797 CGAGCGTCACTTTCTATCATTGTA 58.965 41.667 0.00 0.00 0.00 2.41
2012 2632 5.515270 CGAGCGTCACTTTCTATCATTGTAA 59.485 40.000 0.00 0.00 0.00 2.41
2013 2633 6.506513 CGAGCGTCACTTTCTATCATTGTAAC 60.507 42.308 0.00 0.00 0.00 2.50
2014 2634 6.163476 AGCGTCACTTTCTATCATTGTAACA 58.837 36.000 0.00 0.00 0.00 2.41
2015 2635 6.090898 AGCGTCACTTTCTATCATTGTAACAC 59.909 38.462 0.00 0.00 0.00 3.32
2016 2636 6.128661 GCGTCACTTTCTATCATTGTAACACA 60.129 38.462 0.00 0.00 0.00 3.72
2017 2637 7.448228 CGTCACTTTCTATCATTGTAACACAG 58.552 38.462 0.00 0.00 0.00 3.66
2018 2638 7.328493 CGTCACTTTCTATCATTGTAACACAGA 59.672 37.037 0.00 0.00 0.00 3.41
2019 2639 9.155975 GTCACTTTCTATCATTGTAACACAGAT 57.844 33.333 0.00 0.00 0.00 2.90
2020 2640 9.371136 TCACTTTCTATCATTGTAACACAGATC 57.629 33.333 0.00 0.00 0.00 2.75
2021 2641 8.323854 CACTTTCTATCATTGTAACACAGATCG 58.676 37.037 0.00 0.00 0.00 3.69
2022 2642 8.035394 ACTTTCTATCATTGTAACACAGATCGT 58.965 33.333 0.00 0.00 0.00 3.73
2031 2651 3.215642 CACAGATCGTGTTGCAGGA 57.784 52.632 8.84 0.00 41.03 3.86
2032 2652 1.511850 CACAGATCGTGTTGCAGGAA 58.488 50.000 8.84 0.00 41.03 3.36
2033 2653 1.872952 CACAGATCGTGTTGCAGGAAA 59.127 47.619 8.84 0.00 41.03 3.13
2034 2654 2.485426 CACAGATCGTGTTGCAGGAAAT 59.515 45.455 8.84 0.00 41.03 2.17
2035 2655 3.058016 CACAGATCGTGTTGCAGGAAATT 60.058 43.478 8.84 0.00 41.03 1.82
2036 2656 3.569701 ACAGATCGTGTTGCAGGAAATTT 59.430 39.130 0.00 0.00 34.94 1.82
2037 2657 4.161333 CAGATCGTGTTGCAGGAAATTTC 58.839 43.478 9.83 9.83 32.06 2.17
2038 2658 4.074970 AGATCGTGTTGCAGGAAATTTCT 58.925 39.130 17.42 1.61 32.06 2.52
2039 2659 3.624326 TCGTGTTGCAGGAAATTTCTG 57.376 42.857 17.42 13.82 35.49 3.02
2047 2667 2.664916 CAGGAAATTTCTGCAACACGG 58.335 47.619 17.42 0.00 0.00 4.94
2048 2668 1.613437 AGGAAATTTCTGCAACACGGG 59.387 47.619 17.42 0.00 0.00 5.28
2049 2669 1.339929 GGAAATTTCTGCAACACGGGT 59.660 47.619 17.42 0.00 0.00 5.28
2050 2670 2.607038 GGAAATTTCTGCAACACGGGTC 60.607 50.000 17.42 0.00 0.00 4.46
2051 2671 1.686355 AATTTCTGCAACACGGGTCA 58.314 45.000 0.00 0.00 0.00 4.02
2052 2672 1.909700 ATTTCTGCAACACGGGTCAT 58.090 45.000 0.00 0.00 0.00 3.06
2053 2673 0.950836 TTTCTGCAACACGGGTCATG 59.049 50.000 0.00 0.00 0.00 3.07
2054 2674 0.179032 TTCTGCAACACGGGTCATGT 60.179 50.000 0.00 0.00 0.00 3.21
2055 2675 0.179032 TCTGCAACACGGGTCATGTT 60.179 50.000 0.00 0.00 40.95 2.71
2056 2676 1.070914 TCTGCAACACGGGTCATGTTA 59.929 47.619 0.00 0.00 38.22 2.41
2057 2677 1.464608 CTGCAACACGGGTCATGTTAG 59.535 52.381 0.00 0.00 38.22 2.34
2058 2678 1.070914 TGCAACACGGGTCATGTTAGA 59.929 47.619 0.00 0.00 38.22 2.10
2059 2679 1.732259 GCAACACGGGTCATGTTAGAG 59.268 52.381 0.00 0.00 38.22 2.43
2060 2680 2.611971 GCAACACGGGTCATGTTAGAGA 60.612 50.000 0.00 0.00 38.22 3.10
2061 2681 3.659786 CAACACGGGTCATGTTAGAGAA 58.340 45.455 0.00 0.00 38.22 2.87
2062 2682 4.062293 CAACACGGGTCATGTTAGAGAAA 58.938 43.478 0.00 0.00 38.22 2.52
2063 2683 4.345859 ACACGGGTCATGTTAGAGAAAA 57.654 40.909 0.00 0.00 0.00 2.29
2064 2684 4.906618 ACACGGGTCATGTTAGAGAAAAT 58.093 39.130 0.00 0.00 0.00 1.82
2065 2685 5.313712 ACACGGGTCATGTTAGAGAAAATT 58.686 37.500 0.00 0.00 0.00 1.82
2066 2686 5.768164 ACACGGGTCATGTTAGAGAAAATTT 59.232 36.000 0.00 0.00 0.00 1.82
2067 2687 6.264518 ACACGGGTCATGTTAGAGAAAATTTT 59.735 34.615 2.28 2.28 0.00 1.82
2068 2688 6.582295 CACGGGTCATGTTAGAGAAAATTTTG 59.418 38.462 8.47 0.00 0.00 2.44
2069 2689 5.572896 CGGGTCATGTTAGAGAAAATTTTGC 59.427 40.000 8.47 0.16 0.00 3.68
2070 2690 6.454795 GGGTCATGTTAGAGAAAATTTTGCA 58.545 36.000 8.47 0.00 0.00 4.08
2071 2691 6.928492 GGGTCATGTTAGAGAAAATTTTGCAA 59.072 34.615 8.47 0.00 0.00 4.08
2072 2692 7.095649 GGGTCATGTTAGAGAAAATTTTGCAAC 60.096 37.037 8.47 7.24 0.00 4.17
2073 2693 7.437862 GGTCATGTTAGAGAAAATTTTGCAACA 59.562 33.333 8.47 12.08 0.00 3.33
2074 2694 8.981647 GTCATGTTAGAGAAAATTTTGCAACAT 58.018 29.630 8.47 13.57 36.17 2.71
2082 2702 9.635520 AGAGAAAATTTTGCAACATAGATCAAG 57.364 29.630 8.47 0.00 0.00 3.02
2083 2703 9.415544 GAGAAAATTTTGCAACATAGATCAAGT 57.584 29.630 8.47 0.00 0.00 3.16
2084 2704 9.768662 AGAAAATTTTGCAACATAGATCAAGTT 57.231 25.926 8.47 0.00 0.00 2.66
2085 2705 9.801714 GAAAATTTTGCAACATAGATCAAGTTG 57.198 29.630 8.47 16.10 44.01 3.16
2093 2713 7.317842 CAACATAGATCAAGTTGCAGATTCT 57.682 36.000 10.60 0.00 36.59 2.40
2094 2714 7.759465 CAACATAGATCAAGTTGCAGATTCTT 58.241 34.615 10.60 0.00 36.59 2.52
2095 2715 7.934855 ACATAGATCAAGTTGCAGATTCTTT 57.065 32.000 0.00 0.00 0.00 2.52
2096 2716 8.345724 ACATAGATCAAGTTGCAGATTCTTTT 57.654 30.769 0.00 0.00 0.00 2.27
2097 2717 8.800332 ACATAGATCAAGTTGCAGATTCTTTTT 58.200 29.630 0.00 0.00 0.00 1.94
2098 2718 9.073368 CATAGATCAAGTTGCAGATTCTTTTTG 57.927 33.333 0.00 0.00 0.00 2.44
2099 2719 5.924825 AGATCAAGTTGCAGATTCTTTTTGC 59.075 36.000 0.00 0.00 38.30 3.68
2100 2720 5.008619 TCAAGTTGCAGATTCTTTTTGCA 57.991 34.783 0.00 0.00 45.28 4.08
2105 2725 4.120792 TGCAGATTCTTTTTGCAACACA 57.879 36.364 0.00 0.00 44.13 3.72
2106 2726 4.695396 TGCAGATTCTTTTTGCAACACAT 58.305 34.783 0.00 0.00 44.13 3.21
2107 2727 4.508492 TGCAGATTCTTTTTGCAACACATG 59.492 37.500 0.00 0.00 44.13 3.21
2108 2728 4.508861 GCAGATTCTTTTTGCAACACATGT 59.491 37.500 0.00 0.00 37.75 3.21
2109 2729 5.332808 GCAGATTCTTTTTGCAACACATGTC 60.333 40.000 0.00 0.00 37.75 3.06
2110 2730 5.981315 CAGATTCTTTTTGCAACACATGTCT 59.019 36.000 0.00 0.00 0.00 3.41
2111 2731 6.477688 CAGATTCTTTTTGCAACACATGTCTT 59.522 34.615 0.00 0.00 0.00 3.01
2112 2732 6.477688 AGATTCTTTTTGCAACACATGTCTTG 59.522 34.615 9.28 9.28 0.00 3.02
2113 2733 5.070770 TCTTTTTGCAACACATGTCTTGT 57.929 34.783 14.29 0.00 39.91 3.16
2114 2734 5.477510 TCTTTTTGCAACACATGTCTTGTT 58.522 33.333 14.29 5.18 36.00 2.83
2115 2735 6.625362 TCTTTTTGCAACACATGTCTTGTTA 58.375 32.000 14.29 3.01 36.00 2.41
2116 2736 6.529829 TCTTTTTGCAACACATGTCTTGTTAC 59.470 34.615 14.29 3.82 36.00 2.50
2117 2737 4.972514 TTGCAACACATGTCTTGTTACA 57.027 36.364 14.29 6.18 36.00 2.41
2118 2738 4.550577 TGCAACACATGTCTTGTTACAG 57.449 40.909 14.29 0.00 36.00 2.74
2119 2739 3.944650 TGCAACACATGTCTTGTTACAGT 59.055 39.130 14.29 0.00 36.00 3.55
2120 2740 4.035091 TGCAACACATGTCTTGTTACAGTC 59.965 41.667 14.29 0.00 36.00 3.51
2121 2741 4.273480 GCAACACATGTCTTGTTACAGTCT 59.727 41.667 14.29 0.00 36.00 3.24
2122 2742 5.220854 GCAACACATGTCTTGTTACAGTCTT 60.221 40.000 14.29 0.00 36.00 3.01
2123 2743 6.677920 GCAACACATGTCTTGTTACAGTCTTT 60.678 38.462 14.29 0.00 36.00 2.52
2124 2744 7.250569 CAACACATGTCTTGTTACAGTCTTTT 58.749 34.615 5.74 0.00 36.00 2.27
2125 2745 7.391148 ACACATGTCTTGTTACAGTCTTTTT 57.609 32.000 0.00 0.00 36.00 1.94
2144 2764 4.734398 TTTTTGCAACAGAGGTCATGTT 57.266 36.364 0.00 0.00 41.47 2.71
2151 2771 4.942761 AACAGAGGTCATGTTGCAATTT 57.057 36.364 0.59 0.00 39.36 1.82
2153 2773 5.376854 ACAGAGGTCATGTTGCAATTTAC 57.623 39.130 0.59 0.00 0.00 2.01
2154 2774 5.072741 ACAGAGGTCATGTTGCAATTTACT 58.927 37.500 0.59 0.00 0.00 2.24
2155 2775 6.237901 ACAGAGGTCATGTTGCAATTTACTA 58.762 36.000 0.59 0.00 0.00 1.82
2156 2776 6.372659 ACAGAGGTCATGTTGCAATTTACTAG 59.627 38.462 0.59 0.00 0.00 2.57
2157 2777 6.372659 CAGAGGTCATGTTGCAATTTACTAGT 59.627 38.462 0.59 0.00 0.00 2.57
2158 2778 6.942576 AGAGGTCATGTTGCAATTTACTAGTT 59.057 34.615 0.59 0.00 0.00 2.24
2159 2779 7.448469 AGAGGTCATGTTGCAATTTACTAGTTT 59.552 33.333 0.59 0.00 0.00 2.66
2160 2780 7.951591 AGGTCATGTTGCAATTTACTAGTTTT 58.048 30.769 0.59 0.00 0.00 2.43
2161 2781 8.421002 AGGTCATGTTGCAATTTACTAGTTTTT 58.579 29.630 0.59 0.00 0.00 1.94
2192 2812 9.719279 AACAGATGTTGCAATTTAATTTTTGTG 57.281 25.926 0.59 0.00 36.80 3.33
2193 2813 9.107177 ACAGATGTTGCAATTTAATTTTTGTGA 57.893 25.926 0.59 0.00 0.00 3.58
2194 2814 9.932699 CAGATGTTGCAATTTAATTTTTGTGAA 57.067 25.926 0.59 0.00 0.00 3.18
2215 2835 9.733556 TGTGAAACACAGGTCTTGTTATATATT 57.266 29.630 0.25 0.00 45.67 1.28
2240 2860 8.925161 TTTTTACAACAAAGATCTTGTTCCAG 57.075 30.769 9.17 6.83 40.30 3.86
2241 2861 7.873719 TTTACAACAAAGATCTTGTTCCAGA 57.126 32.000 9.17 0.00 40.30 3.86
2242 2862 7.873719 TTACAACAAAGATCTTGTTCCAGAA 57.126 32.000 9.17 4.60 40.30 3.02
2243 2863 6.773976 ACAACAAAGATCTTGTTCCAGAAA 57.226 33.333 9.17 0.00 40.30 2.52
2244 2864 6.564328 ACAACAAAGATCTTGTTCCAGAAAC 58.436 36.000 9.17 0.00 40.30 2.78
2245 2865 6.378280 ACAACAAAGATCTTGTTCCAGAAACT 59.622 34.615 9.17 0.00 40.30 2.66
2246 2866 7.556275 ACAACAAAGATCTTGTTCCAGAAACTA 59.444 33.333 9.17 0.00 40.30 2.24
2247 2867 8.571336 CAACAAAGATCTTGTTCCAGAAACTAT 58.429 33.333 9.17 0.00 40.30 2.12
2248 2868 8.697507 ACAAAGATCTTGTTCCAGAAACTATT 57.302 30.769 9.17 0.00 38.76 1.73
2249 2869 9.136323 ACAAAGATCTTGTTCCAGAAACTATTT 57.864 29.630 9.17 0.00 38.76 1.40
2250 2870 9.971922 CAAAGATCTTGTTCCAGAAACTATTTT 57.028 29.630 9.17 0.00 38.76 1.82
2253 2873 8.951243 AGATCTTGTTCCAGAAACTATTTTAGC 58.049 33.333 0.00 0.00 38.76 3.09
2254 2874 7.129109 TCTTGTTCCAGAAACTATTTTAGCG 57.871 36.000 0.00 0.00 38.76 4.26
2255 2875 5.873179 TGTTCCAGAAACTATTTTAGCGG 57.127 39.130 0.00 0.00 38.76 5.52
2256 2876 5.553123 TGTTCCAGAAACTATTTTAGCGGA 58.447 37.500 0.00 0.00 38.76 5.54
2257 2877 6.177610 TGTTCCAGAAACTATTTTAGCGGAT 58.822 36.000 0.00 0.00 38.76 4.18
2258 2878 7.332557 TGTTCCAGAAACTATTTTAGCGGATA 58.667 34.615 0.00 0.00 38.76 2.59
2259 2879 7.494625 TGTTCCAGAAACTATTTTAGCGGATAG 59.505 37.037 0.00 0.00 38.76 2.08
2260 2880 7.120923 TCCAGAAACTATTTTAGCGGATAGT 57.879 36.000 0.00 0.00 39.97 2.12
2261 2881 6.984474 TCCAGAAACTATTTTAGCGGATAGTG 59.016 38.462 0.00 0.00 38.66 2.74
2262 2882 6.984474 CCAGAAACTATTTTAGCGGATAGTGA 59.016 38.462 0.00 0.00 38.66 3.41
2263 2883 7.169982 CCAGAAACTATTTTAGCGGATAGTGAG 59.830 40.741 0.00 0.00 38.66 3.51
2264 2884 6.702282 AGAAACTATTTTAGCGGATAGTGAGC 59.298 38.462 0.00 0.00 38.66 4.26
2265 2885 5.531122 ACTATTTTAGCGGATAGTGAGCA 57.469 39.130 0.00 0.00 37.61 4.26
2266 2886 5.914033 ACTATTTTAGCGGATAGTGAGCAA 58.086 37.500 0.00 0.00 37.61 3.91
2267 2887 5.753921 ACTATTTTAGCGGATAGTGAGCAAC 59.246 40.000 0.00 0.00 37.61 4.17
2268 2888 2.203800 TTAGCGGATAGTGAGCAACG 57.796 50.000 0.00 0.00 0.00 4.10
2269 2889 1.385528 TAGCGGATAGTGAGCAACGA 58.614 50.000 0.00 0.00 0.00 3.85
2270 2890 0.101399 AGCGGATAGTGAGCAACGAG 59.899 55.000 0.00 0.00 0.00 4.18
2271 2891 1.483424 GCGGATAGTGAGCAACGAGC 61.483 60.000 0.00 0.00 46.19 5.03
2284 2904 3.767230 CGAGCAGCGGTCGTGTTG 61.767 66.667 17.67 0.00 46.41 3.33
2285 2905 2.355837 GAGCAGCGGTCGTGTTGA 60.356 61.111 0.00 0.00 0.00 3.18
2296 2916 3.234596 GTCGTGTTGACCGAAAGAAAG 57.765 47.619 0.00 0.00 42.04 2.62
2297 2917 2.861935 GTCGTGTTGACCGAAAGAAAGA 59.138 45.455 0.00 0.00 42.04 2.52
2298 2918 3.307782 GTCGTGTTGACCGAAAGAAAGAA 59.692 43.478 0.00 0.00 42.04 2.52
2299 2919 3.933955 TCGTGTTGACCGAAAGAAAGAAA 59.066 39.130 0.00 0.00 0.00 2.52
2300 2920 4.392445 TCGTGTTGACCGAAAGAAAGAAAA 59.608 37.500 0.00 0.00 0.00 2.29
2301 2921 5.090083 CGTGTTGACCGAAAGAAAGAAAAA 58.910 37.500 0.00 0.00 0.00 1.94
2302 2922 5.227184 CGTGTTGACCGAAAGAAAGAAAAAG 59.773 40.000 0.00 0.00 0.00 2.27
2303 2923 6.319399 GTGTTGACCGAAAGAAAGAAAAAGA 58.681 36.000 0.00 0.00 0.00 2.52
2304 2924 6.972901 GTGTTGACCGAAAGAAAGAAAAAGAT 59.027 34.615 0.00 0.00 0.00 2.40
2305 2925 6.972328 TGTTGACCGAAAGAAAGAAAAAGATG 59.028 34.615 0.00 0.00 0.00 2.90
2306 2926 6.072112 TGACCGAAAGAAAGAAAAAGATGG 57.928 37.500 0.00 0.00 0.00 3.51
2307 2927 5.825679 TGACCGAAAGAAAGAAAAAGATGGA 59.174 36.000 0.00 0.00 0.00 3.41
2308 2928 6.320164 TGACCGAAAGAAAGAAAAAGATGGAA 59.680 34.615 0.00 0.00 0.00 3.53
2309 2929 6.504398 ACCGAAAGAAAGAAAAAGATGGAAC 58.496 36.000 0.00 0.00 0.00 3.62
2310 2930 5.920840 CCGAAAGAAAGAAAAAGATGGAACC 59.079 40.000 0.00 0.00 0.00 3.62
2311 2931 6.460953 CCGAAAGAAAGAAAAAGATGGAACCA 60.461 38.462 0.00 0.00 0.00 3.67
2312 2932 6.417930 CGAAAGAAAGAAAAAGATGGAACCAC 59.582 38.462 0.00 0.00 0.00 4.16
2313 2933 7.423844 AAAGAAAGAAAAAGATGGAACCACT 57.576 32.000 0.00 0.00 0.00 4.00
2314 2934 6.641169 AGAAAGAAAAAGATGGAACCACTC 57.359 37.500 0.00 0.00 0.00 3.51
2315 2935 5.536538 AGAAAGAAAAAGATGGAACCACTCC 59.463 40.000 0.00 0.00 45.64 3.85
2322 2942 3.483587 GGAACCACTCCAGCAGGA 58.516 61.111 0.00 0.00 44.67 3.86
2323 2943 1.003233 GGAACCACTCCAGCAGGAC 60.003 63.158 0.00 0.00 44.67 3.85
2324 2944 1.754745 GAACCACTCCAGCAGGACA 59.245 57.895 0.00 0.00 39.61 4.02
2325 2945 0.603975 GAACCACTCCAGCAGGACAC 60.604 60.000 0.00 0.00 39.61 3.67
2326 2946 2.047844 CCACTCCAGCAGGACACG 60.048 66.667 0.00 0.00 39.61 4.49
2327 2947 2.737180 CACTCCAGCAGGACACGT 59.263 61.111 0.00 0.00 39.61 4.49
2328 2948 1.665916 CACTCCAGCAGGACACGTG 60.666 63.158 15.48 15.48 39.61 4.49
2329 2949 2.134287 ACTCCAGCAGGACACGTGT 61.134 57.895 23.64 23.64 39.61 4.49
2330 2950 1.373497 CTCCAGCAGGACACGTGTC 60.373 63.158 35.26 35.26 39.61 3.67
2331 2951 2.734723 CCAGCAGGACACGTGTCG 60.735 66.667 35.21 25.75 45.65 4.35
2332 2952 3.406361 CAGCAGGACACGTGTCGC 61.406 66.667 35.21 32.30 45.65 5.19
2333 2953 3.911698 AGCAGGACACGTGTCGCA 61.912 61.111 34.57 0.00 45.65 5.10
2334 2954 3.702555 GCAGGACACGTGTCGCAC 61.703 66.667 35.21 24.41 45.65 5.34
2343 2963 3.764049 GTGTCGCACGAACGAGCC 61.764 66.667 10.45 0.00 43.89 4.70
2349 2969 4.717629 CACGAACGAGCCGGCAGA 62.718 66.667 31.54 0.00 0.00 4.26
2350 2970 3.760035 ACGAACGAGCCGGCAGAT 61.760 61.111 31.54 17.12 0.00 2.90
2351 2971 2.956964 CGAACGAGCCGGCAGATC 60.957 66.667 31.54 23.32 0.00 2.75
2352 2972 2.956964 GAACGAGCCGGCAGATCG 60.957 66.667 31.54 29.85 42.04 3.69
2356 2976 4.819761 GAGCCGGCAGATCGCACA 62.820 66.667 31.54 0.00 45.17 4.57
2377 2997 2.479198 GCGTCTGCCGGTTAAAGC 59.521 61.111 1.90 0.00 36.94 3.51
2378 2998 3.035576 GCGTCTGCCGGTTAAAGCC 62.036 63.158 1.90 0.00 36.94 4.35
2379 2999 1.669760 CGTCTGCCGGTTAAAGCCA 60.670 57.895 1.90 0.00 0.00 4.75
2380 3000 1.873863 GTCTGCCGGTTAAAGCCAC 59.126 57.895 1.90 0.00 0.00 5.01
2381 3001 0.887387 GTCTGCCGGTTAAAGCCACA 60.887 55.000 1.90 0.00 0.00 4.17
2382 3002 0.887387 TCTGCCGGTTAAAGCCACAC 60.887 55.000 1.90 0.00 0.00 3.82
2383 3003 2.182614 CTGCCGGTTAAAGCCACACG 62.183 60.000 1.90 0.00 0.00 4.49
2384 3004 2.255881 GCCGGTTAAAGCCACACGT 61.256 57.895 1.90 0.00 0.00 4.49
2385 3005 1.788067 GCCGGTTAAAGCCACACGTT 61.788 55.000 1.90 0.00 0.00 3.99
2386 3006 0.664224 CCGGTTAAAGCCACACGTTT 59.336 50.000 0.00 0.00 0.00 3.60
2387 3007 1.065851 CCGGTTAAAGCCACACGTTTT 59.934 47.619 0.00 0.00 0.00 2.43
2388 3008 2.377880 CGGTTAAAGCCACACGTTTTC 58.622 47.619 0.00 0.00 0.00 2.29
2389 3009 2.734670 GGTTAAAGCCACACGTTTTCC 58.265 47.619 0.00 0.00 0.00 3.13
2390 3010 2.359848 GGTTAAAGCCACACGTTTTCCT 59.640 45.455 0.00 0.00 0.00 3.36
2391 3011 3.181484 GGTTAAAGCCACACGTTTTCCTT 60.181 43.478 0.00 0.00 0.00 3.36
2392 3012 4.426416 GTTAAAGCCACACGTTTTCCTTT 58.574 39.130 0.00 0.00 0.00 3.11
2393 3013 3.603158 AAAGCCACACGTTTTCCTTTT 57.397 38.095 0.00 0.00 0.00 2.27
2394 3014 3.603158 AAGCCACACGTTTTCCTTTTT 57.397 38.095 0.00 0.00 0.00 1.94
2395 3015 4.722361 AAGCCACACGTTTTCCTTTTTA 57.278 36.364 0.00 0.00 0.00 1.52
2396 3016 4.722361 AGCCACACGTTTTCCTTTTTAA 57.278 36.364 0.00 0.00 0.00 1.52
2397 3017 5.074584 AGCCACACGTTTTCCTTTTTAAA 57.925 34.783 0.00 0.00 0.00 1.52
2398 3018 5.666462 AGCCACACGTTTTCCTTTTTAAAT 58.334 33.333 0.00 0.00 0.00 1.40
2399 3019 6.110033 AGCCACACGTTTTCCTTTTTAAATT 58.890 32.000 0.00 0.00 0.00 1.82
2400 3020 6.256975 AGCCACACGTTTTCCTTTTTAAATTC 59.743 34.615 0.00 0.00 0.00 2.17
2401 3021 6.036191 GCCACACGTTTTCCTTTTTAAATTCA 59.964 34.615 0.00 0.00 0.00 2.57
2402 3022 7.413109 GCCACACGTTTTCCTTTTTAAATTCAA 60.413 33.333 0.00 0.00 0.00 2.69
2403 3023 8.113675 CCACACGTTTTCCTTTTTAAATTCAAG 58.886 33.333 0.00 0.00 0.00 3.02
2404 3024 8.865001 CACACGTTTTCCTTTTTAAATTCAAGA 58.135 29.630 0.00 0.00 0.00 3.02
2405 3025 9.594478 ACACGTTTTCCTTTTTAAATTCAAGAT 57.406 25.926 0.00 0.00 0.00 2.40
2480 3100 6.774354 TTCATCGTTGTTAGTTTACTGTCC 57.226 37.500 0.00 0.00 0.00 4.02
2481 3101 5.845103 TCATCGTTGTTAGTTTACTGTCCA 58.155 37.500 0.00 0.00 0.00 4.02
2482 3102 5.693104 TCATCGTTGTTAGTTTACTGTCCAC 59.307 40.000 0.00 0.00 0.00 4.02
2483 3103 4.370917 TCGTTGTTAGTTTACTGTCCACC 58.629 43.478 0.00 0.00 0.00 4.61
2484 3104 4.121317 CGTTGTTAGTTTACTGTCCACCA 58.879 43.478 0.00 0.00 0.00 4.17
2485 3105 4.025480 CGTTGTTAGTTTACTGTCCACCAC 60.025 45.833 0.00 0.00 0.00 4.16
2486 3106 4.757019 TGTTAGTTTACTGTCCACCACA 57.243 40.909 0.00 0.00 0.00 4.17
2487 3107 5.100344 TGTTAGTTTACTGTCCACCACAA 57.900 39.130 0.00 0.00 33.31 3.33
2488 3108 5.498393 TGTTAGTTTACTGTCCACCACAAA 58.502 37.500 0.00 0.00 33.31 2.83
2489 3109 5.944599 TGTTAGTTTACTGTCCACCACAAAA 59.055 36.000 0.00 0.00 33.31 2.44
2490 3110 6.603997 TGTTAGTTTACTGTCCACCACAAAAT 59.396 34.615 0.00 0.00 33.31 1.82
2491 3111 7.774157 TGTTAGTTTACTGTCCACCACAAAATA 59.226 33.333 0.00 0.00 33.31 1.40
2492 3112 6.877611 AGTTTACTGTCCACCACAAAATAG 57.122 37.500 0.00 0.00 33.31 1.73
2493 3113 6.597562 AGTTTACTGTCCACCACAAAATAGA 58.402 36.000 0.00 0.00 33.31 1.98
2494 3114 6.710744 AGTTTACTGTCCACCACAAAATAGAG 59.289 38.462 0.00 0.00 33.31 2.43
2495 3115 4.974645 ACTGTCCACCACAAAATAGAGA 57.025 40.909 0.00 0.00 33.31 3.10
2496 3116 5.304686 ACTGTCCACCACAAAATAGAGAA 57.695 39.130 0.00 0.00 33.31 2.87
2497 3117 5.063880 ACTGTCCACCACAAAATAGAGAAC 58.936 41.667 0.00 0.00 33.31 3.01
2498 3118 5.163195 ACTGTCCACCACAAAATAGAGAACT 60.163 40.000 0.00 0.00 33.31 3.01
2499 3119 6.042781 ACTGTCCACCACAAAATAGAGAACTA 59.957 38.462 0.00 0.00 33.31 2.24
2500 3120 7.016153 TGTCCACCACAAAATAGAGAACTAT 57.984 36.000 0.00 0.00 34.93 2.12
2526 3146 6.767524 TTTTCCTTTCTAGTTGCAAGTTCA 57.232 33.333 12.95 0.00 0.00 3.18
2527 3147 6.959639 TTTCCTTTCTAGTTGCAAGTTCAT 57.040 33.333 12.95 0.00 0.00 2.57
2528 3148 6.560253 TTCCTTTCTAGTTGCAAGTTCATC 57.440 37.500 12.95 0.00 0.00 2.92
2529 3149 5.620206 TCCTTTCTAGTTGCAAGTTCATCA 58.380 37.500 12.95 0.00 0.00 3.07
2530 3150 6.240894 TCCTTTCTAGTTGCAAGTTCATCAT 58.759 36.000 12.95 0.00 0.00 2.45
2531 3151 6.372659 TCCTTTCTAGTTGCAAGTTCATCATC 59.627 38.462 12.95 0.00 0.00 2.92
2532 3152 6.149973 CCTTTCTAGTTGCAAGTTCATCATCA 59.850 38.462 12.95 0.00 0.00 3.07
2533 3153 7.308770 CCTTTCTAGTTGCAAGTTCATCATCAA 60.309 37.037 12.95 0.00 0.00 2.57
2534 3154 6.486253 TCTAGTTGCAAGTTCATCATCAAC 57.514 37.500 12.95 0.00 35.39 3.18
2535 3155 6.233434 TCTAGTTGCAAGTTCATCATCAACT 58.767 36.000 12.95 9.82 44.10 3.16
2536 3156 5.779529 AGTTGCAAGTTCATCATCAACTT 57.220 34.783 0.00 0.00 43.46 2.66
2543 3163 5.562506 AGTTCATCATCAACTTGCATCTG 57.437 39.130 0.00 0.00 29.29 2.90
2544 3164 5.250982 AGTTCATCATCAACTTGCATCTGA 58.749 37.500 0.00 0.00 29.29 3.27
2545 3165 5.354513 AGTTCATCATCAACTTGCATCTGAG 59.645 40.000 0.00 0.00 29.29 3.35
2546 3166 4.196971 TCATCATCAACTTGCATCTGAGG 58.803 43.478 0.00 0.00 0.00 3.86
2547 3167 2.362736 TCATCAACTTGCATCTGAGGC 58.637 47.619 7.45 7.45 0.00 4.70
2548 3168 1.404391 CATCAACTTGCATCTGAGGCC 59.596 52.381 12.15 0.00 0.00 5.19
2549 3169 0.694771 TCAACTTGCATCTGAGGCCT 59.305 50.000 3.86 3.86 0.00 5.19
2550 3170 0.809385 CAACTTGCATCTGAGGCCTG 59.191 55.000 12.00 0.00 0.00 4.85
2551 3171 0.694771 AACTTGCATCTGAGGCCTGA 59.305 50.000 12.00 0.00 0.00 3.86
2552 3172 0.917533 ACTTGCATCTGAGGCCTGAT 59.082 50.000 12.00 4.46 0.00 2.90
2553 3173 1.134159 ACTTGCATCTGAGGCCTGATC 60.134 52.381 12.00 0.00 0.00 2.92
2554 3174 1.141254 CTTGCATCTGAGGCCTGATCT 59.859 52.381 12.00 0.00 0.00 2.75
2555 3175 1.210538 TGCATCTGAGGCCTGATCTT 58.789 50.000 12.00 0.00 0.00 2.40
2556 3176 1.140452 TGCATCTGAGGCCTGATCTTC 59.860 52.381 12.00 0.00 0.00 2.87
2557 3177 1.417145 GCATCTGAGGCCTGATCTTCT 59.583 52.381 12.00 0.00 0.00 2.85
2558 3178 2.158784 GCATCTGAGGCCTGATCTTCTT 60.159 50.000 12.00 0.00 0.00 2.52
2559 3179 3.684981 GCATCTGAGGCCTGATCTTCTTT 60.685 47.826 12.00 0.00 0.00 2.52
2560 3180 4.525024 CATCTGAGGCCTGATCTTCTTTT 58.475 43.478 12.00 0.00 0.00 2.27
2561 3181 3.947868 TCTGAGGCCTGATCTTCTTTTG 58.052 45.455 12.00 0.00 0.00 2.44
2562 3182 3.328931 TCTGAGGCCTGATCTTCTTTTGT 59.671 43.478 12.00 0.00 0.00 2.83
2563 3183 3.679389 TGAGGCCTGATCTTCTTTTGTC 58.321 45.455 12.00 0.00 0.00 3.18
2564 3184 3.013219 GAGGCCTGATCTTCTTTTGTCC 58.987 50.000 12.00 0.00 0.00 4.02
2565 3185 2.095461 GGCCTGATCTTCTTTTGTCCC 58.905 52.381 0.00 0.00 0.00 4.46
2566 3186 2.555227 GGCCTGATCTTCTTTTGTCCCA 60.555 50.000 0.00 0.00 0.00 4.37
2567 3187 2.751806 GCCTGATCTTCTTTTGTCCCAG 59.248 50.000 0.00 0.00 0.00 4.45
2568 3188 2.751806 CCTGATCTTCTTTTGTCCCAGC 59.248 50.000 0.00 0.00 0.00 4.85
2569 3189 3.560882 CCTGATCTTCTTTTGTCCCAGCT 60.561 47.826 0.00 0.00 0.00 4.24
2570 3190 3.415212 TGATCTTCTTTTGTCCCAGCTG 58.585 45.455 6.78 6.78 0.00 4.24
2571 3191 1.609208 TCTTCTTTTGTCCCAGCTGC 58.391 50.000 8.66 0.00 0.00 5.25
2572 3192 1.133823 TCTTCTTTTGTCCCAGCTGCA 60.134 47.619 8.66 0.00 0.00 4.41
2573 3193 1.682854 CTTCTTTTGTCCCAGCTGCAA 59.317 47.619 8.66 4.53 0.00 4.08
2574 3194 1.999648 TCTTTTGTCCCAGCTGCAAT 58.000 45.000 8.66 0.00 0.00 3.56
2575 3195 1.888512 TCTTTTGTCCCAGCTGCAATC 59.111 47.619 8.66 0.00 0.00 2.67
2576 3196 0.968405 TTTTGTCCCAGCTGCAATCC 59.032 50.000 8.66 0.00 0.00 3.01
2577 3197 0.112995 TTTGTCCCAGCTGCAATCCT 59.887 50.000 8.66 0.00 0.00 3.24
2578 3198 0.991146 TTGTCCCAGCTGCAATCCTA 59.009 50.000 8.66 0.00 0.00 2.94
2579 3199 1.216064 TGTCCCAGCTGCAATCCTAT 58.784 50.000 8.66 0.00 0.00 2.57
2580 3200 1.141657 TGTCCCAGCTGCAATCCTATC 59.858 52.381 8.66 0.00 0.00 2.08
2581 3201 0.767375 TCCCAGCTGCAATCCTATCC 59.233 55.000 8.66 0.00 0.00 2.59
2582 3202 0.769873 CCCAGCTGCAATCCTATCCT 59.230 55.000 8.66 0.00 0.00 3.24
2583 3203 1.271271 CCCAGCTGCAATCCTATCCTC 60.271 57.143 8.66 0.00 0.00 3.71
2584 3204 1.607509 CCAGCTGCAATCCTATCCTCG 60.608 57.143 8.66 0.00 0.00 4.63
2585 3205 1.342496 CAGCTGCAATCCTATCCTCGA 59.658 52.381 0.00 0.00 0.00 4.04
2586 3206 1.342819 AGCTGCAATCCTATCCTCGAC 59.657 52.381 1.02 0.00 0.00 4.20
2587 3207 1.342819 GCTGCAATCCTATCCTCGACT 59.657 52.381 0.00 0.00 0.00 4.18
2588 3208 2.609244 GCTGCAATCCTATCCTCGACTC 60.609 54.545 0.00 0.00 0.00 3.36
2589 3209 1.609072 TGCAATCCTATCCTCGACTCG 59.391 52.381 0.00 0.00 0.00 4.18
2590 3210 1.667467 GCAATCCTATCCTCGACTCGC 60.667 57.143 0.00 0.00 0.00 5.03
2591 3211 1.609072 CAATCCTATCCTCGACTCGCA 59.391 52.381 0.00 0.00 0.00 5.10
2592 3212 1.982660 ATCCTATCCTCGACTCGCAA 58.017 50.000 0.00 0.00 0.00 4.85
2593 3213 1.982660 TCCTATCCTCGACTCGCAAT 58.017 50.000 0.00 0.00 0.00 3.56
2594 3214 2.307768 TCCTATCCTCGACTCGCAATT 58.692 47.619 0.00 0.00 0.00 2.32
2595 3215 2.034685 TCCTATCCTCGACTCGCAATTG 59.965 50.000 0.00 0.00 0.00 2.32
2596 3216 2.398498 CTATCCTCGACTCGCAATTGG 58.602 52.381 7.72 0.00 0.00 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
42 43 9.442047 TGTCCATTTTGTTTGTGTTCTATTTTT 57.558 25.926 0.00 0.00 0.00 1.94
43 44 9.612066 ATGTCCATTTTGTTTGTGTTCTATTTT 57.388 25.926 0.00 0.00 0.00 1.82
44 45 9.260002 GATGTCCATTTTGTTTGTGTTCTATTT 57.740 29.630 0.00 0.00 0.00 1.40
45 46 8.420222 TGATGTCCATTTTGTTTGTGTTCTATT 58.580 29.630 0.00 0.00 0.00 1.73
46 47 7.950512 TGATGTCCATTTTGTTTGTGTTCTAT 58.049 30.769 0.00 0.00 0.00 1.98
47 48 7.068103 ACTGATGTCCATTTTGTTTGTGTTCTA 59.932 33.333 0.00 0.00 0.00 2.10
48 49 6.127366 ACTGATGTCCATTTTGTTTGTGTTCT 60.127 34.615 0.00 0.00 0.00 3.01
49 50 6.042143 ACTGATGTCCATTTTGTTTGTGTTC 58.958 36.000 0.00 0.00 0.00 3.18
50 51 5.976458 ACTGATGTCCATTTTGTTTGTGTT 58.024 33.333 0.00 0.00 0.00 3.32
51 52 5.596836 ACTGATGTCCATTTTGTTTGTGT 57.403 34.783 0.00 0.00 0.00 3.72
52 53 6.907206 AAACTGATGTCCATTTTGTTTGTG 57.093 33.333 0.00 0.00 0.00 3.33
53 54 8.006298 TCTAAACTGATGTCCATTTTGTTTGT 57.994 30.769 0.00 0.00 31.34 2.83
54 55 8.918658 CATCTAAACTGATGTCCATTTTGTTTG 58.081 33.333 0.00 0.00 39.05 2.93
67 68 8.746751 CATAGTTACGTCACATCTAAACTGATG 58.253 37.037 2.23 0.00 46.61 3.07
68 69 8.467598 ACATAGTTACGTCACATCTAAACTGAT 58.532 33.333 2.23 0.00 0.00 2.90
69 70 7.823665 ACATAGTTACGTCACATCTAAACTGA 58.176 34.615 2.23 0.00 0.00 3.41
70 71 7.753580 TGACATAGTTACGTCACATCTAAACTG 59.246 37.037 2.23 0.00 37.23 3.16
71 72 7.823665 TGACATAGTTACGTCACATCTAAACT 58.176 34.615 2.23 2.15 37.23 2.66
81 82 7.639945 CATCTAGATGTGACATAGTTACGTCA 58.360 38.462 22.42 0.00 39.49 4.35
109 110 6.598850 ACGTAAAACAAAGGGTCTGTTTAAGA 59.401 34.615 1.68 0.00 44.25 2.10
110 111 6.689669 CACGTAAAACAAAGGGTCTGTTTAAG 59.310 38.462 1.68 0.54 44.25 1.85
111 112 6.373774 TCACGTAAAACAAAGGGTCTGTTTAA 59.626 34.615 1.68 0.00 44.25 1.52
112 113 5.879223 TCACGTAAAACAAAGGGTCTGTTTA 59.121 36.000 1.68 0.00 44.25 2.01
113 114 4.701171 TCACGTAAAACAAAGGGTCTGTTT 59.299 37.500 0.00 0.00 46.37 2.83
114 115 4.263435 TCACGTAAAACAAAGGGTCTGTT 58.737 39.130 0.00 0.00 38.65 3.16
115 116 3.876341 TCACGTAAAACAAAGGGTCTGT 58.124 40.909 0.00 0.00 0.00 3.41
116 117 4.886247 TTCACGTAAAACAAAGGGTCTG 57.114 40.909 0.00 0.00 0.00 3.51
117 118 7.229907 ACATAATTCACGTAAAACAAAGGGTCT 59.770 33.333 0.00 0.00 0.00 3.85
118 119 7.364970 ACATAATTCACGTAAAACAAAGGGTC 58.635 34.615 0.00 0.00 0.00 4.46
119 120 7.229907 AGACATAATTCACGTAAAACAAAGGGT 59.770 33.333 0.00 0.00 0.00 4.34
120 121 7.537306 CAGACATAATTCACGTAAAACAAAGGG 59.463 37.037 0.00 0.00 0.00 3.95
121 122 8.286800 TCAGACATAATTCACGTAAAACAAAGG 58.713 33.333 0.00 0.00 0.00 3.11
122 123 9.658475 TTCAGACATAATTCACGTAAAACAAAG 57.342 29.630 0.00 0.00 0.00 2.77
132 133 8.185003 TCAACATAGTTCAGACATAATTCACG 57.815 34.615 0.00 0.00 0.00 4.35
214 215 3.973206 ATCCAACACCGTATCTGTTCA 57.027 42.857 0.00 0.00 29.02 3.18
219 220 3.370527 CCCTCAAATCCAACACCGTATCT 60.371 47.826 0.00 0.00 0.00 1.98
244 245 1.965414 TCTTAGGGCATCTCCAACCA 58.035 50.000 0.00 0.00 36.21 3.67
291 292 4.154195 GTCAAAGGTCGATTTGTAGTGCAT 59.846 41.667 10.44 0.00 40.36 3.96
294 295 4.750098 AGTGTCAAAGGTCGATTTGTAGTG 59.250 41.667 10.44 0.00 40.36 2.74
388 390 3.682718 GCATACATGGCCTCAACTGTAGT 60.683 47.826 3.32 0.00 0.00 2.73
430 432 1.915614 CTGTCCATGGTGCTTCGTGC 61.916 60.000 12.58 0.00 43.25 5.34
431 433 1.915614 GCTGTCCATGGTGCTTCGTG 61.916 60.000 12.58 0.00 0.00 4.35
432 434 1.672356 GCTGTCCATGGTGCTTCGT 60.672 57.895 12.58 0.00 0.00 3.85
433 435 1.672030 TGCTGTCCATGGTGCTTCG 60.672 57.895 12.58 0.00 0.00 3.79
434 436 1.878775 GTGCTGTCCATGGTGCTTC 59.121 57.895 12.58 8.78 0.00 3.86
435 437 1.968017 CGTGCTGTCCATGGTGCTT 60.968 57.895 12.58 0.00 0.00 3.91
447 449 0.373716 GGCGAGGAATTTACGTGCTG 59.626 55.000 0.00 0.00 0.00 4.41
461 463 1.144969 TACGTGCTTCTTTTGGCGAG 58.855 50.000 0.00 0.00 0.00 5.03
462 739 1.584175 TTACGTGCTTCTTTTGGCGA 58.416 45.000 0.00 0.00 0.00 5.54
485 762 1.203187 AGTGAAGACTGGGACCTGCTA 60.203 52.381 0.00 0.00 0.00 3.49
541 818 3.891049 CCGGTAGGGTACTGTACTTACT 58.109 50.000 16.79 14.21 33.14 2.24
575 853 2.355197 ACAAGGTTTTGTTTTGCCTGC 58.645 42.857 0.00 0.00 45.01 4.85
592 870 1.133915 AGCTCCTGGTTTTCCGAACAA 60.134 47.619 0.00 0.00 44.36 2.83
634 912 2.046285 GCGTTTCTGGACATGGGGG 61.046 63.158 0.00 0.00 0.00 5.40
636 914 0.734889 GATGCGTTTCTGGACATGGG 59.265 55.000 0.00 0.00 0.00 4.00
637 915 0.374758 CGATGCGTTTCTGGACATGG 59.625 55.000 0.00 0.00 0.00 3.66
739 1020 1.247567 CTGGAGGCTAGAGCTAGAGC 58.752 60.000 10.28 10.28 41.70 4.09
740 1021 1.247567 GCTGGAGGCTAGAGCTAGAG 58.752 60.000 8.65 0.00 41.70 2.43
741 1022 3.430473 GCTGGAGGCTAGAGCTAGA 57.570 57.895 8.65 0.00 41.70 2.43
769 1065 4.410743 GGCTGCTTGCTTCGTGGC 62.411 66.667 0.00 0.00 42.39 5.01
798 1094 1.198178 ACGTGAGAGAAGAGAAGCGAC 59.802 52.381 0.00 0.00 0.00 5.19
845 1141 0.040958 CTGGCTTTGCTTGTGTCGTC 60.041 55.000 0.00 0.00 0.00 4.20
848 1144 0.318445 CAGCTGGCTTTGCTTGTGTC 60.318 55.000 5.57 0.00 38.92 3.67
849 1145 1.737816 CAGCTGGCTTTGCTTGTGT 59.262 52.632 5.57 0.00 38.92 3.72
915 1211 7.470079 TGTATCGCTTCTACTACACTAAGTTG 58.530 38.462 0.00 0.00 0.00 3.16
937 1240 2.474561 GCAATGCTGCTCTGCTGTA 58.525 52.632 16.03 0.00 45.74 2.74
972 1275 1.883084 GTCCACCGGAATAGCAGCG 60.883 63.158 9.46 0.00 31.38 5.18
983 1286 1.079405 ATTGTAGTGCCGTCCACCG 60.079 57.895 0.41 0.00 45.83 4.94
991 1294 1.447140 TCGTCGCCATTGTAGTGCC 60.447 57.895 0.00 0.00 0.00 5.01
1290 1593 2.030185 GTCACAGAAGAAGTAGCGGTCA 60.030 50.000 0.00 0.00 0.00 4.02
1556 1859 1.002366 CATCTCGTTGTACTGCAGCC 58.998 55.000 15.27 5.21 0.00 4.85
1696 2000 8.975295 ACGGTTAGAAAGTTAGATGTTAGGTAT 58.025 33.333 0.00 0.00 0.00 2.73
1697 2001 8.353423 ACGGTTAGAAAGTTAGATGTTAGGTA 57.647 34.615 0.00 0.00 0.00 3.08
1698 2002 7.237209 ACGGTTAGAAAGTTAGATGTTAGGT 57.763 36.000 0.00 0.00 0.00 3.08
1699 2003 9.245962 CATACGGTTAGAAAGTTAGATGTTAGG 57.754 37.037 0.00 0.00 0.00 2.69
1777 2081 1.933853 GTGAATGATGCGTACAGGACC 59.066 52.381 0.00 0.00 0.00 4.46
1778 2082 1.588404 CGTGAATGATGCGTACAGGAC 59.412 52.381 0.00 0.00 0.00 3.85
1781 2085 3.786955 GCGTGAATGATGCGTACAG 57.213 52.632 0.00 0.00 0.00 2.74
1812 2432 3.677340 GGCAACGCAAACGCAACG 61.677 61.111 0.00 0.00 45.53 4.10
1823 2443 3.414700 GACCACGCTGAGGCAACG 61.415 66.667 0.00 0.00 46.39 4.10
1873 2493 9.567776 AAAAAGAGGAAAAAGGAAAAAGAAACA 57.432 25.926 0.00 0.00 0.00 2.83
1924 2544 3.763897 AGATCCGCTGGCATTTAAAAAGT 59.236 39.130 0.00 0.00 0.00 2.66
1935 2555 0.382158 GCCTTAAAAGATCCGCTGGC 59.618 55.000 0.00 0.00 0.00 4.85
1936 2556 1.943340 GAGCCTTAAAAGATCCGCTGG 59.057 52.381 0.00 0.00 0.00 4.85
1937 2557 1.594862 CGAGCCTTAAAAGATCCGCTG 59.405 52.381 0.00 0.00 0.00 5.18
1938 2558 1.941325 CGAGCCTTAAAAGATCCGCT 58.059 50.000 0.00 0.00 0.00 5.52
1939 2559 0.305009 GCGAGCCTTAAAAGATCCGC 59.695 55.000 0.00 0.00 0.00 5.54
1940 2560 0.577269 CGCGAGCCTTAAAAGATCCG 59.423 55.000 0.00 0.00 0.00 4.18
1941 2561 1.861575 CTCGCGAGCCTTAAAAGATCC 59.138 52.381 25.07 0.00 0.00 3.36
1954 2574 2.429907 GATCCGATGGCTCGCGAG 60.430 66.667 31.37 31.37 43.66 5.03
1955 2575 3.199561 CTGATCCGATGGCTCGCGA 62.200 63.158 9.26 9.26 43.66 5.87
1956 2576 2.732468 CTGATCCGATGGCTCGCG 60.732 66.667 0.00 0.00 43.66 5.87
1957 2577 2.356793 CCTGATCCGATGGCTCGC 60.357 66.667 0.00 0.00 43.66 5.03
1958 2578 1.300465 CACCTGATCCGATGGCTCG 60.300 63.158 0.00 0.28 44.62 5.03
1959 2579 1.070445 CCACCTGATCCGATGGCTC 59.930 63.158 0.00 0.00 0.00 4.70
1960 2580 0.765903 ATCCACCTGATCCGATGGCT 60.766 55.000 0.00 0.00 31.87 4.75
1961 2581 0.109342 AATCCACCTGATCCGATGGC 59.891 55.000 0.00 0.00 31.61 4.40
1962 2582 1.417517 TCAATCCACCTGATCCGATGG 59.582 52.381 0.00 0.00 31.61 3.51
1963 2583 2.763933 CTCAATCCACCTGATCCGATG 58.236 52.381 0.00 0.00 31.61 3.84
1964 2584 1.071385 GCTCAATCCACCTGATCCGAT 59.929 52.381 0.00 0.00 31.61 4.18
1965 2585 0.465705 GCTCAATCCACCTGATCCGA 59.534 55.000 0.00 0.00 31.61 4.55
1966 2586 0.178767 TGCTCAATCCACCTGATCCG 59.821 55.000 0.00 0.00 31.61 4.18
1967 2587 2.019984 GTTGCTCAATCCACCTGATCC 58.980 52.381 0.00 0.00 31.61 3.36
1968 2588 2.019984 GGTTGCTCAATCCACCTGATC 58.980 52.381 0.00 0.00 31.61 2.92
1969 2589 1.679944 CGGTTGCTCAATCCACCTGAT 60.680 52.381 0.00 0.00 34.22 2.90
1970 2590 0.321564 CGGTTGCTCAATCCACCTGA 60.322 55.000 0.00 0.00 0.00 3.86
1971 2591 0.321564 TCGGTTGCTCAATCCACCTG 60.322 55.000 0.00 0.00 0.00 4.00
1972 2592 0.036010 CTCGGTTGCTCAATCCACCT 60.036 55.000 0.00 0.00 0.00 4.00
1973 2593 1.648467 GCTCGGTTGCTCAATCCACC 61.648 60.000 0.00 0.00 0.00 4.61
1974 2594 1.796796 GCTCGGTTGCTCAATCCAC 59.203 57.895 0.00 0.00 0.00 4.02
1975 2595 1.741401 CGCTCGGTTGCTCAATCCA 60.741 57.895 0.00 0.00 0.00 3.41
1976 2596 1.696832 GACGCTCGGTTGCTCAATCC 61.697 60.000 0.00 0.00 0.00 3.01
1977 2597 1.014044 TGACGCTCGGTTGCTCAATC 61.014 55.000 0.00 0.00 0.00 2.67
1978 2598 1.005037 TGACGCTCGGTTGCTCAAT 60.005 52.632 0.00 0.00 0.00 2.57
1979 2599 1.954146 GTGACGCTCGGTTGCTCAA 60.954 57.895 0.00 0.00 0.00 3.02
1980 2600 2.355837 GTGACGCTCGGTTGCTCA 60.356 61.111 0.00 0.00 0.00 4.26
1981 2601 1.222115 AAAGTGACGCTCGGTTGCTC 61.222 55.000 0.00 0.00 0.00 4.26
1982 2602 1.222115 GAAAGTGACGCTCGGTTGCT 61.222 55.000 0.00 0.00 0.00 3.91
1983 2603 1.204312 GAAAGTGACGCTCGGTTGC 59.796 57.895 0.00 0.00 0.00 4.17
1984 2604 2.060326 TAGAAAGTGACGCTCGGTTG 57.940 50.000 0.00 0.00 0.00 3.77
1985 2605 2.230508 TGATAGAAAGTGACGCTCGGTT 59.769 45.455 0.00 0.00 0.00 4.44
1986 2606 1.816835 TGATAGAAAGTGACGCTCGGT 59.183 47.619 0.00 0.00 0.00 4.69
1987 2607 2.561733 TGATAGAAAGTGACGCTCGG 57.438 50.000 0.00 0.00 0.00 4.63
1988 2608 3.859961 ACAATGATAGAAAGTGACGCTCG 59.140 43.478 0.00 0.00 0.00 5.03
1989 2609 6.310467 TGTTACAATGATAGAAAGTGACGCTC 59.690 38.462 0.00 0.00 0.00 5.03
1990 2610 6.090898 GTGTTACAATGATAGAAAGTGACGCT 59.909 38.462 0.00 0.00 0.00 5.07
1991 2611 6.128661 TGTGTTACAATGATAGAAAGTGACGC 60.129 38.462 0.00 0.00 32.16 5.19
1992 2612 7.328493 TCTGTGTTACAATGATAGAAAGTGACG 59.672 37.037 0.00 0.00 0.00 4.35
1993 2613 8.534333 TCTGTGTTACAATGATAGAAAGTGAC 57.466 34.615 0.00 0.00 0.00 3.67
1994 2614 9.371136 GATCTGTGTTACAATGATAGAAAGTGA 57.629 33.333 0.00 0.00 0.00 3.41
1995 2615 8.323854 CGATCTGTGTTACAATGATAGAAAGTG 58.676 37.037 0.00 0.00 0.00 3.16
1996 2616 8.035394 ACGATCTGTGTTACAATGATAGAAAGT 58.965 33.333 12.71 4.27 0.00 2.66
1997 2617 8.323854 CACGATCTGTGTTACAATGATAGAAAG 58.676 37.037 12.71 3.85 43.88 2.62
1998 2618 8.185003 CACGATCTGTGTTACAATGATAGAAA 57.815 34.615 12.71 0.00 43.88 2.52
1999 2619 7.755582 CACGATCTGTGTTACAATGATAGAA 57.244 36.000 12.71 0.00 43.88 2.10
2014 2634 2.254546 TTTCCTGCAACACGATCTGT 57.745 45.000 0.00 0.00 32.89 3.41
2015 2635 3.837213 AATTTCCTGCAACACGATCTG 57.163 42.857 0.00 0.00 0.00 2.90
2016 2636 4.074970 AGAAATTTCCTGCAACACGATCT 58.925 39.130 14.61 0.00 0.00 2.75
2017 2637 4.161333 CAGAAATTTCCTGCAACACGATC 58.839 43.478 14.61 0.00 0.00 3.69
2018 2638 4.164822 CAGAAATTTCCTGCAACACGAT 57.835 40.909 14.61 0.00 0.00 3.73
2019 2639 3.624326 CAGAAATTTCCTGCAACACGA 57.376 42.857 14.61 0.00 0.00 4.35
2027 2647 2.607771 CCCGTGTTGCAGAAATTTCCTG 60.608 50.000 14.61 12.57 34.88 3.86
2028 2648 1.613437 CCCGTGTTGCAGAAATTTCCT 59.387 47.619 14.61 0.00 0.00 3.36
2029 2649 1.339929 ACCCGTGTTGCAGAAATTTCC 59.660 47.619 14.61 1.15 0.00 3.13
2030 2650 2.034053 TGACCCGTGTTGCAGAAATTTC 59.966 45.455 10.33 10.33 0.00 2.17
2031 2651 2.028130 TGACCCGTGTTGCAGAAATTT 58.972 42.857 0.00 0.00 0.00 1.82
2032 2652 1.686355 TGACCCGTGTTGCAGAAATT 58.314 45.000 0.00 0.00 0.00 1.82
2033 2653 1.541147 CATGACCCGTGTTGCAGAAAT 59.459 47.619 0.00 0.00 0.00 2.17
2034 2654 0.950836 CATGACCCGTGTTGCAGAAA 59.049 50.000 0.00 0.00 0.00 2.52
2035 2655 0.179032 ACATGACCCGTGTTGCAGAA 60.179 50.000 0.00 0.00 28.11 3.02
2036 2656 0.179032 AACATGACCCGTGTTGCAGA 60.179 50.000 0.00 0.00 41.32 4.26
2037 2657 1.464608 CTAACATGACCCGTGTTGCAG 59.535 52.381 13.11 2.27 42.56 4.41
2038 2658 1.070914 TCTAACATGACCCGTGTTGCA 59.929 47.619 13.11 0.00 42.56 4.08
2039 2659 1.732259 CTCTAACATGACCCGTGTTGC 59.268 52.381 13.11 0.00 42.56 4.17
2040 2660 3.313012 TCTCTAACATGACCCGTGTTG 57.687 47.619 13.11 5.43 42.56 3.33
2041 2661 4.345859 TTTCTCTAACATGACCCGTGTT 57.654 40.909 0.00 9.19 44.42 3.32
2042 2662 4.345859 TTTTCTCTAACATGACCCGTGT 57.654 40.909 0.00 0.00 34.83 4.49
2043 2663 5.880054 AATTTTCTCTAACATGACCCGTG 57.120 39.130 0.00 0.00 0.00 4.94
2044 2664 6.677913 CAAAATTTTCTCTAACATGACCCGT 58.322 36.000 0.00 0.00 0.00 5.28
2045 2665 5.572896 GCAAAATTTTCTCTAACATGACCCG 59.427 40.000 0.00 0.00 0.00 5.28
2046 2666 6.454795 TGCAAAATTTTCTCTAACATGACCC 58.545 36.000 0.00 0.00 0.00 4.46
2047 2667 7.437862 TGTTGCAAAATTTTCTCTAACATGACC 59.562 33.333 0.00 0.00 0.00 4.02
2048 2668 8.351495 TGTTGCAAAATTTTCTCTAACATGAC 57.649 30.769 0.00 0.00 0.00 3.06
2056 2676 9.635520 CTTGATCTATGTTGCAAAATTTTCTCT 57.364 29.630 7.58 0.00 0.00 3.10
2057 2677 9.415544 ACTTGATCTATGTTGCAAAATTTTCTC 57.584 29.630 7.58 1.42 0.00 2.87
2058 2678 9.768662 AACTTGATCTATGTTGCAAAATTTTCT 57.231 25.926 7.58 0.00 0.00 2.52
2059 2679 9.801714 CAACTTGATCTATGTTGCAAAATTTTC 57.198 29.630 7.58 3.63 37.54 2.29
2069 2689 7.317842 AGAATCTGCAACTTGATCTATGTTG 57.682 36.000 16.18 16.18 43.55 3.33
2070 2690 7.934855 AAGAATCTGCAACTTGATCTATGTT 57.065 32.000 0.00 0.00 0.00 2.71
2071 2691 7.934855 AAAGAATCTGCAACTTGATCTATGT 57.065 32.000 0.00 0.00 0.00 2.29
2072 2692 9.073368 CAAAAAGAATCTGCAACTTGATCTATG 57.927 33.333 0.00 0.00 0.00 2.23
2073 2693 7.758528 GCAAAAAGAATCTGCAACTTGATCTAT 59.241 33.333 0.00 0.00 36.09 1.98
2074 2694 7.086376 GCAAAAAGAATCTGCAACTTGATCTA 58.914 34.615 0.00 0.00 36.09 1.98
2075 2695 5.924825 GCAAAAAGAATCTGCAACTTGATCT 59.075 36.000 0.00 0.00 36.09 2.75
2076 2696 5.693104 TGCAAAAAGAATCTGCAACTTGATC 59.307 36.000 0.00 0.00 42.84 2.92
2077 2697 5.603596 TGCAAAAAGAATCTGCAACTTGAT 58.396 33.333 0.00 0.00 42.84 2.57
2078 2698 5.008619 TGCAAAAAGAATCTGCAACTTGA 57.991 34.783 0.00 0.00 42.84 3.02
2084 2704 4.120792 TGTGTTGCAAAAAGAATCTGCA 57.879 36.364 0.00 0.00 44.04 4.41
2085 2705 4.508861 ACATGTGTTGCAAAAAGAATCTGC 59.491 37.500 0.00 0.00 36.60 4.26
2086 2706 5.981315 AGACATGTGTTGCAAAAAGAATCTG 59.019 36.000 1.15 0.00 0.00 2.90
2087 2707 6.152932 AGACATGTGTTGCAAAAAGAATCT 57.847 33.333 1.15 0.00 0.00 2.40
2088 2708 6.256321 ACAAGACATGTGTTGCAAAAAGAATC 59.744 34.615 29.77 0.00 41.93 2.52
2089 2709 6.108015 ACAAGACATGTGTTGCAAAAAGAAT 58.892 32.000 29.77 9.27 41.93 2.40
2090 2710 5.477510 ACAAGACATGTGTTGCAAAAAGAA 58.522 33.333 29.77 0.00 41.93 2.52
2091 2711 5.070770 ACAAGACATGTGTTGCAAAAAGA 57.929 34.783 29.77 0.00 41.93 2.52
2092 2712 5.783100 AACAAGACATGTGTTGCAAAAAG 57.217 34.783 29.77 9.94 42.99 2.27
2093 2713 6.159293 TGTAACAAGACATGTGTTGCAAAAA 58.841 32.000 29.77 12.11 44.93 1.94
2094 2714 5.714047 TGTAACAAGACATGTGTTGCAAAA 58.286 33.333 29.77 14.30 44.93 2.44
2095 2715 5.105957 ACTGTAACAAGACATGTGTTGCAAA 60.106 36.000 29.77 15.90 46.38 3.68
2096 2716 4.397730 ACTGTAACAAGACATGTGTTGCAA 59.602 37.500 29.77 18.09 46.38 4.08
2097 2717 3.944650 ACTGTAACAAGACATGTGTTGCA 59.055 39.130 29.77 21.62 45.45 4.08
2098 2718 4.273480 AGACTGTAACAAGACATGTGTTGC 59.727 41.667 29.77 18.72 42.99 4.17
2099 2719 5.991328 AGACTGTAACAAGACATGTGTTG 57.009 39.130 28.63 28.63 42.99 3.33
2100 2720 7.391148 AAAAGACTGTAACAAGACATGTGTT 57.609 32.000 1.15 1.45 42.99 3.32
2101 2721 7.391148 AAAAAGACTGTAACAAGACATGTGT 57.609 32.000 1.15 0.00 42.99 3.72
2123 2743 4.431809 CAACATGACCTCTGTTGCAAAAA 58.568 39.130 0.00 0.00 44.78 1.94
2124 2744 4.044336 CAACATGACCTCTGTTGCAAAA 57.956 40.909 0.00 0.00 44.78 2.44
2125 2745 3.713858 CAACATGACCTCTGTTGCAAA 57.286 42.857 0.00 0.00 44.78 3.68
2130 2750 4.942761 AAATTGCAACATGACCTCTGTT 57.057 36.364 0.00 0.00 37.31 3.16
2131 2751 5.072741 AGTAAATTGCAACATGACCTCTGT 58.927 37.500 0.00 0.00 0.00 3.41
2132 2752 5.633830 AGTAAATTGCAACATGACCTCTG 57.366 39.130 0.00 0.00 0.00 3.35
2133 2753 6.476378 ACTAGTAAATTGCAACATGACCTCT 58.524 36.000 0.00 0.00 0.00 3.69
2134 2754 6.743575 ACTAGTAAATTGCAACATGACCTC 57.256 37.500 0.00 0.00 0.00 3.85
2135 2755 7.524717 AAACTAGTAAATTGCAACATGACCT 57.475 32.000 0.00 0.00 0.00 3.85
2136 2756 8.587952 AAAAACTAGTAAATTGCAACATGACC 57.412 30.769 0.00 0.00 0.00 4.02
2166 2786 9.719279 CACAAAAATTAAATTGCAACATCTGTT 57.281 25.926 0.00 0.00 39.12 3.16
2167 2787 9.107177 TCACAAAAATTAAATTGCAACATCTGT 57.893 25.926 0.00 0.00 0.00 3.41
2168 2788 9.932699 TTCACAAAAATTAAATTGCAACATCTG 57.067 25.926 0.00 0.00 0.00 2.90
2172 2792 9.334693 GTGTTTCACAAAAATTAAATTGCAACA 57.665 25.926 0.00 0.00 34.08 3.33
2173 2793 9.334693 TGTGTTTCACAAAAATTAAATTGCAAC 57.665 25.926 0.00 0.00 41.69 4.17
2174 2794 9.552114 CTGTGTTTCACAAAAATTAAATTGCAA 57.448 25.926 0.00 0.00 44.08 4.08
2175 2795 8.180267 CCTGTGTTTCACAAAAATTAAATTGCA 58.820 29.630 4.21 0.00 44.08 4.08
2176 2796 8.180920 ACCTGTGTTTCACAAAAATTAAATTGC 58.819 29.630 4.21 0.00 44.08 3.56
2177 2797 9.701355 GACCTGTGTTTCACAAAAATTAAATTG 57.299 29.630 4.21 0.00 44.08 2.32
2178 2798 9.665719 AGACCTGTGTTTCACAAAAATTAAATT 57.334 25.926 4.21 0.00 44.08 1.82
2179 2799 9.665719 AAGACCTGTGTTTCACAAAAATTAAAT 57.334 25.926 4.21 0.00 44.08 1.40
2180 2800 8.930760 CAAGACCTGTGTTTCACAAAAATTAAA 58.069 29.630 4.21 0.00 44.08 1.52
2181 2801 8.091449 ACAAGACCTGTGTTTCACAAAAATTAA 58.909 29.630 4.21 0.00 44.08 1.40
2182 2802 7.607250 ACAAGACCTGTGTTTCACAAAAATTA 58.393 30.769 4.21 0.00 44.08 1.40
2183 2803 6.463360 ACAAGACCTGTGTTTCACAAAAATT 58.537 32.000 4.21 0.00 44.08 1.82
2184 2804 6.036577 ACAAGACCTGTGTTTCACAAAAAT 57.963 33.333 4.21 0.00 44.08 1.82
2185 2805 5.461032 ACAAGACCTGTGTTTCACAAAAA 57.539 34.783 4.21 0.00 44.08 1.94
2186 2806 5.461032 AACAAGACCTGTGTTTCACAAAA 57.539 34.783 4.21 0.00 44.08 2.44
2187 2807 6.767524 ATAACAAGACCTGTGTTTCACAAA 57.232 33.333 4.21 0.00 44.08 2.83
2188 2808 9.733556 ATATATAACAAGACCTGTGTTTCACAA 57.266 29.630 4.21 0.00 44.08 3.33
2189 2809 9.733556 AATATATAACAAGACCTGTGTTTCACA 57.266 29.630 2.66 2.66 42.45 3.58
2215 2835 8.744652 TCTGGAACAAGATCTTTGTTGTAAAAA 58.255 29.630 20.69 5.95 42.11 1.94
2216 2836 8.287439 TCTGGAACAAGATCTTTGTTGTAAAA 57.713 30.769 20.69 6.66 42.11 1.52
2217 2837 7.873719 TCTGGAACAAGATCTTTGTTGTAAA 57.126 32.000 20.69 7.61 42.11 2.01
2218 2838 7.873719 TTCTGGAACAAGATCTTTGTTGTAA 57.126 32.000 20.69 10.83 42.11 2.41
2219 2839 7.556275 AGTTTCTGGAACAAGATCTTTGTTGTA 59.444 33.333 20.69 12.08 42.11 2.41
2220 2840 6.378280 AGTTTCTGGAACAAGATCTTTGTTGT 59.622 34.615 20.69 9.34 42.11 3.32
2221 2841 6.799512 AGTTTCTGGAACAAGATCTTTGTTG 58.200 36.000 20.69 8.78 42.11 3.33
2222 2842 8.697507 ATAGTTTCTGGAACAAGATCTTTGTT 57.302 30.769 17.61 17.61 44.43 2.83
2223 2843 8.697507 AATAGTTTCTGGAACAAGATCTTTGT 57.302 30.769 4.86 5.03 40.84 2.83
2224 2844 9.971922 AAAATAGTTTCTGGAACAAGATCTTTG 57.028 29.630 4.86 4.38 40.84 2.77
2227 2847 8.951243 GCTAAAATAGTTTCTGGAACAAGATCT 58.049 33.333 0.98 0.00 40.84 2.75
2228 2848 7.905493 CGCTAAAATAGTTTCTGGAACAAGATC 59.095 37.037 0.98 0.00 40.84 2.75
2229 2849 7.148239 CCGCTAAAATAGTTTCTGGAACAAGAT 60.148 37.037 0.98 0.00 40.84 2.40
2230 2850 6.148811 CCGCTAAAATAGTTTCTGGAACAAGA 59.851 38.462 0.98 0.00 40.84 3.02
2231 2851 6.148811 TCCGCTAAAATAGTTTCTGGAACAAG 59.851 38.462 0.98 0.00 40.84 3.16
2232 2852 5.998981 TCCGCTAAAATAGTTTCTGGAACAA 59.001 36.000 0.98 0.00 40.84 2.83
2233 2853 5.553123 TCCGCTAAAATAGTTTCTGGAACA 58.447 37.500 0.98 0.00 40.84 3.18
2234 2854 6.679327 ATCCGCTAAAATAGTTTCTGGAAC 57.321 37.500 7.29 0.00 38.58 3.62
2235 2855 7.494625 CACTATCCGCTAAAATAGTTTCTGGAA 59.505 37.037 7.29 0.00 36.74 3.53
2236 2856 6.984474 CACTATCCGCTAAAATAGTTTCTGGA 59.016 38.462 6.07 6.07 36.74 3.86
2237 2857 6.984474 TCACTATCCGCTAAAATAGTTTCTGG 59.016 38.462 0.00 0.00 36.74 3.86
2238 2858 7.306866 GCTCACTATCCGCTAAAATAGTTTCTG 60.307 40.741 0.00 0.00 36.74 3.02
2239 2859 6.702282 GCTCACTATCCGCTAAAATAGTTTCT 59.298 38.462 0.00 0.00 36.74 2.52
2240 2860 6.479001 TGCTCACTATCCGCTAAAATAGTTTC 59.521 38.462 0.00 0.00 36.74 2.78
2241 2861 6.346096 TGCTCACTATCCGCTAAAATAGTTT 58.654 36.000 0.00 0.00 36.74 2.66
2242 2862 5.914033 TGCTCACTATCCGCTAAAATAGTT 58.086 37.500 0.00 0.00 36.74 2.24
2243 2863 5.531122 TGCTCACTATCCGCTAAAATAGT 57.469 39.130 0.00 0.00 38.85 2.12
2244 2864 5.107837 CGTTGCTCACTATCCGCTAAAATAG 60.108 44.000 0.00 0.00 0.00 1.73
2245 2865 4.743151 CGTTGCTCACTATCCGCTAAAATA 59.257 41.667 0.00 0.00 0.00 1.40
2246 2866 3.555956 CGTTGCTCACTATCCGCTAAAAT 59.444 43.478 0.00 0.00 0.00 1.82
2247 2867 2.927477 CGTTGCTCACTATCCGCTAAAA 59.073 45.455 0.00 0.00 0.00 1.52
2248 2868 2.164827 TCGTTGCTCACTATCCGCTAAA 59.835 45.455 0.00 0.00 0.00 1.85
2249 2869 1.746787 TCGTTGCTCACTATCCGCTAA 59.253 47.619 0.00 0.00 0.00 3.09
2250 2870 1.333931 CTCGTTGCTCACTATCCGCTA 59.666 52.381 0.00 0.00 0.00 4.26
2251 2871 0.101399 CTCGTTGCTCACTATCCGCT 59.899 55.000 0.00 0.00 0.00 5.52
2252 2872 1.483424 GCTCGTTGCTCACTATCCGC 61.483 60.000 0.00 0.00 38.95 5.54
2253 2873 0.179137 TGCTCGTTGCTCACTATCCG 60.179 55.000 5.00 0.00 43.37 4.18
2254 2874 1.565305 CTGCTCGTTGCTCACTATCC 58.435 55.000 5.00 0.00 43.37 2.59
2255 2875 0.926846 GCTGCTCGTTGCTCACTATC 59.073 55.000 0.00 0.00 43.37 2.08
2256 2876 0.803768 CGCTGCTCGTTGCTCACTAT 60.804 55.000 0.00 0.00 43.37 2.12
2257 2877 1.444383 CGCTGCTCGTTGCTCACTA 60.444 57.895 0.00 0.00 43.37 2.74
2258 2878 2.736236 CGCTGCTCGTTGCTCACT 60.736 61.111 0.00 0.00 43.37 3.41
2259 2879 3.782244 CCGCTGCTCGTTGCTCAC 61.782 66.667 0.00 0.00 43.37 3.51
2260 2880 4.299547 ACCGCTGCTCGTTGCTCA 62.300 61.111 0.00 0.00 43.37 4.26
2261 2881 3.482783 GACCGCTGCTCGTTGCTC 61.483 66.667 0.00 0.00 43.37 4.26
2264 2884 3.767230 CACGACCGCTGCTCGTTG 61.767 66.667 13.33 8.04 42.42 4.10
2265 2885 3.785189 AACACGACCGCTGCTCGTT 62.785 57.895 13.33 4.37 42.42 3.85
2266 2886 4.280494 AACACGACCGCTGCTCGT 62.280 61.111 10.64 10.64 45.15 4.18
2267 2887 3.767230 CAACACGACCGCTGCTCG 61.767 66.667 9.39 9.39 37.17 5.03
2268 2888 2.355837 TCAACACGACCGCTGCTC 60.356 61.111 0.00 0.00 0.00 4.26
2269 2889 2.661866 GTCAACACGACCGCTGCT 60.662 61.111 0.00 0.00 38.85 4.24
2276 2896 2.861935 TCTTTCTTTCGGTCAACACGAC 59.138 45.455 0.00 0.00 44.57 4.34
2277 2897 3.167921 TCTTTCTTTCGGTCAACACGA 57.832 42.857 0.00 0.00 38.78 4.35
2278 2898 3.936902 TTCTTTCTTTCGGTCAACACG 57.063 42.857 0.00 0.00 0.00 4.49
2279 2899 6.319399 TCTTTTTCTTTCTTTCGGTCAACAC 58.681 36.000 0.00 0.00 0.00 3.32
2280 2900 6.503589 TCTTTTTCTTTCTTTCGGTCAACA 57.496 33.333 0.00 0.00 0.00 3.33
2281 2901 6.417930 CCATCTTTTTCTTTCTTTCGGTCAAC 59.582 38.462 0.00 0.00 0.00 3.18
2282 2902 6.320164 TCCATCTTTTTCTTTCTTTCGGTCAA 59.680 34.615 0.00 0.00 0.00 3.18
2283 2903 5.825679 TCCATCTTTTTCTTTCTTTCGGTCA 59.174 36.000 0.00 0.00 0.00 4.02
2284 2904 6.313744 TCCATCTTTTTCTTTCTTTCGGTC 57.686 37.500 0.00 0.00 0.00 4.79
2285 2905 6.461092 GGTTCCATCTTTTTCTTTCTTTCGGT 60.461 38.462 0.00 0.00 0.00 4.69
2286 2906 5.920840 GGTTCCATCTTTTTCTTTCTTTCGG 59.079 40.000 0.00 0.00 0.00 4.30
2287 2907 6.417930 GTGGTTCCATCTTTTTCTTTCTTTCG 59.582 38.462 0.00 0.00 0.00 3.46
2288 2908 7.492524 AGTGGTTCCATCTTTTTCTTTCTTTC 58.507 34.615 0.00 0.00 0.00 2.62
2289 2909 7.417911 GGAGTGGTTCCATCTTTTTCTTTCTTT 60.418 37.037 0.00 0.00 46.01 2.52
2290 2910 6.040955 GGAGTGGTTCCATCTTTTTCTTTCTT 59.959 38.462 0.00 0.00 46.01 2.52
2291 2911 5.536538 GGAGTGGTTCCATCTTTTTCTTTCT 59.463 40.000 0.00 0.00 46.01 2.52
2292 2912 5.773575 GGAGTGGTTCCATCTTTTTCTTTC 58.226 41.667 0.00 0.00 46.01 2.62
2293 2913 5.791336 GGAGTGGTTCCATCTTTTTCTTT 57.209 39.130 0.00 0.00 46.01 2.52
2305 2925 1.003233 GTCCTGCTGGAGTGGTTCC 60.003 63.158 13.36 0.00 44.16 3.62
2306 2926 0.603975 GTGTCCTGCTGGAGTGGTTC 60.604 60.000 13.36 0.55 44.16 3.62
2307 2927 1.451936 GTGTCCTGCTGGAGTGGTT 59.548 57.895 13.36 0.00 44.16 3.67
2308 2928 2.872388 CGTGTCCTGCTGGAGTGGT 61.872 63.158 13.36 0.00 44.16 4.16
2309 2929 2.047844 CGTGTCCTGCTGGAGTGG 60.048 66.667 13.36 1.05 44.16 4.00
2310 2930 1.665916 CACGTGTCCTGCTGGAGTG 60.666 63.158 13.36 13.53 44.16 3.51
2311 2931 2.088674 GACACGTGTCCTGCTGGAGT 62.089 60.000 33.62 6.88 44.16 3.85
2312 2932 1.373497 GACACGTGTCCTGCTGGAG 60.373 63.158 33.62 4.18 44.16 3.86
2313 2933 2.734591 GACACGTGTCCTGCTGGA 59.265 61.111 33.62 8.48 39.07 3.86
2314 2934 2.734723 CGACACGTGTCCTGCTGG 60.735 66.667 36.01 20.87 41.86 4.85
2315 2935 3.406361 GCGACACGTGTCCTGCTG 61.406 66.667 36.01 24.78 41.86 4.41
2316 2936 3.911698 TGCGACACGTGTCCTGCT 61.912 61.111 36.01 8.52 41.86 4.24
2317 2937 3.702555 GTGCGACACGTGTCCTGC 61.703 66.667 36.01 32.77 41.86 4.85
2326 2946 3.764049 GGCTCGTTCGTGCGACAC 61.764 66.667 11.86 0.00 36.80 3.67
2332 2952 3.989698 ATCTGCCGGCTCGTTCGTG 62.990 63.158 29.70 7.39 0.00 4.35
2333 2953 3.701604 GATCTGCCGGCTCGTTCGT 62.702 63.158 29.70 6.36 0.00 3.85
2334 2954 2.956964 GATCTGCCGGCTCGTTCG 60.957 66.667 29.70 8.92 0.00 3.95
2335 2955 2.956964 CGATCTGCCGGCTCGTTC 60.957 66.667 29.70 19.95 0.00 3.95
2339 2959 4.819761 TGTGCGATCTGCCGGCTC 62.820 66.667 29.70 16.37 45.60 4.70
2342 2962 4.794439 TCGTGTGCGATCTGCCGG 62.794 66.667 0.00 0.00 45.60 6.13
2343 2963 3.250323 CTCGTGTGCGATCTGCCG 61.250 66.667 7.00 4.41 46.80 5.69
2344 2964 3.558411 GCTCGTGTGCGATCTGCC 61.558 66.667 7.00 0.85 46.80 4.85
2355 2975 3.620300 TAACCGGCAGACGCTCGTG 62.620 63.158 0.00 0.00 42.52 4.35
2356 2976 2.424705 TTTAACCGGCAGACGCTCGT 62.425 55.000 0.00 0.00 42.52 4.18
2357 2977 1.683790 CTTTAACCGGCAGACGCTCG 61.684 60.000 0.00 0.00 42.52 5.03
2358 2978 1.967597 GCTTTAACCGGCAGACGCTC 61.968 60.000 0.00 0.00 42.52 5.03
2359 2979 2.033194 GCTTTAACCGGCAGACGCT 61.033 57.895 0.00 0.00 42.52 5.07
2360 2980 2.479198 GCTTTAACCGGCAGACGC 59.521 61.111 0.00 0.00 42.52 5.19
2361 2981 1.669760 TGGCTTTAACCGGCAGACG 60.670 57.895 0.00 0.00 43.80 4.18
2362 2982 0.887387 TGTGGCTTTAACCGGCAGAC 60.887 55.000 0.00 0.00 37.64 3.51
2363 2983 0.887387 GTGTGGCTTTAACCGGCAGA 60.887 55.000 0.00 0.00 37.64 4.26
2364 2984 1.579429 GTGTGGCTTTAACCGGCAG 59.421 57.895 0.00 0.00 37.64 4.85
2365 2985 2.255172 CGTGTGGCTTTAACCGGCA 61.255 57.895 0.00 0.00 34.31 5.69
2366 2986 1.788067 AACGTGTGGCTTTAACCGGC 61.788 55.000 0.00 0.00 0.00 6.13
2367 2987 0.664224 AAACGTGTGGCTTTAACCGG 59.336 50.000 0.00 0.00 0.00 5.28
2368 2988 2.377880 GAAAACGTGTGGCTTTAACCG 58.622 47.619 0.00 0.00 0.00 4.44
2369 2989 2.359848 AGGAAAACGTGTGGCTTTAACC 59.640 45.455 0.00 0.00 0.00 2.85
2370 2990 3.703286 AGGAAAACGTGTGGCTTTAAC 57.297 42.857 0.00 0.00 0.00 2.01
2371 2991 4.722361 AAAGGAAAACGTGTGGCTTTAA 57.278 36.364 0.00 0.00 0.00 1.52
2372 2992 4.722361 AAAAGGAAAACGTGTGGCTTTA 57.278 36.364 0.00 0.00 0.00 1.85
2373 2993 3.603158 AAAAGGAAAACGTGTGGCTTT 57.397 38.095 0.00 0.00 0.00 3.51
2374 2994 3.603158 AAAAAGGAAAACGTGTGGCTT 57.397 38.095 0.00 0.00 0.00 4.35
2375 2995 4.722361 TTAAAAAGGAAAACGTGTGGCT 57.278 36.364 0.00 0.00 0.00 4.75
2376 2996 5.977171 ATTTAAAAAGGAAAACGTGTGGC 57.023 34.783 0.00 0.00 0.00 5.01
2377 2997 7.527084 TGAATTTAAAAAGGAAAACGTGTGG 57.473 32.000 0.00 0.00 0.00 4.17
2378 2998 8.865001 TCTTGAATTTAAAAAGGAAAACGTGTG 58.135 29.630 0.00 0.00 0.00 3.82
2379 2999 8.989653 TCTTGAATTTAAAAAGGAAAACGTGT 57.010 26.923 0.00 0.00 0.00 4.49
2454 3074 8.124199 GGACAGTAAACTAACAACGATGAAAAA 58.876 33.333 0.00 0.00 0.00 1.94
2455 3075 7.280428 TGGACAGTAAACTAACAACGATGAAAA 59.720 33.333 0.00 0.00 0.00 2.29
2456 3076 6.762187 TGGACAGTAAACTAACAACGATGAAA 59.238 34.615 0.00 0.00 0.00 2.69
2457 3077 6.201425 GTGGACAGTAAACTAACAACGATGAA 59.799 38.462 0.00 0.00 0.00 2.57
2458 3078 5.693104 GTGGACAGTAAACTAACAACGATGA 59.307 40.000 0.00 0.00 0.00 2.92
2459 3079 5.107220 GGTGGACAGTAAACTAACAACGATG 60.107 44.000 0.00 0.00 0.00 3.84
2460 3080 4.992951 GGTGGACAGTAAACTAACAACGAT 59.007 41.667 0.00 0.00 0.00 3.73
2461 3081 4.141981 TGGTGGACAGTAAACTAACAACGA 60.142 41.667 0.00 0.00 0.00 3.85
2462 3082 4.025480 GTGGTGGACAGTAAACTAACAACG 60.025 45.833 0.00 0.00 0.00 4.10
2463 3083 4.877251 TGTGGTGGACAGTAAACTAACAAC 59.123 41.667 0.00 0.00 0.00 3.32
2464 3084 5.100344 TGTGGTGGACAGTAAACTAACAA 57.900 39.130 0.00 0.00 0.00 2.83
2465 3085 4.757019 TGTGGTGGACAGTAAACTAACA 57.243 40.909 0.00 0.00 0.00 2.41
2466 3086 6.439675 TTTTGTGGTGGACAGTAAACTAAC 57.560 37.500 0.00 0.00 35.44 2.34
2467 3087 8.212312 TCTATTTTGTGGTGGACAGTAAACTAA 58.788 33.333 0.00 0.00 35.44 2.24
2468 3088 7.737869 TCTATTTTGTGGTGGACAGTAAACTA 58.262 34.615 0.00 0.00 35.44 2.24
2469 3089 6.597562 TCTATTTTGTGGTGGACAGTAAACT 58.402 36.000 0.00 0.00 35.44 2.66
2470 3090 6.708949 TCTCTATTTTGTGGTGGACAGTAAAC 59.291 38.462 0.00 0.00 35.44 2.01
2471 3091 6.833041 TCTCTATTTTGTGGTGGACAGTAAA 58.167 36.000 0.00 0.00 35.44 2.01
2472 3092 6.428083 TCTCTATTTTGTGGTGGACAGTAA 57.572 37.500 0.00 0.00 35.44 2.24
2473 3093 6.042781 AGTTCTCTATTTTGTGGTGGACAGTA 59.957 38.462 0.00 0.00 35.44 2.74
2474 3094 4.974645 TCTCTATTTTGTGGTGGACAGT 57.025 40.909 0.00 0.00 35.44 3.55
2475 3095 5.308825 AGTTCTCTATTTTGTGGTGGACAG 58.691 41.667 0.00 0.00 35.44 3.51
2476 3096 5.304686 AGTTCTCTATTTTGTGGTGGACA 57.695 39.130 0.00 0.00 0.00 4.02
2477 3097 7.923414 AATAGTTCTCTATTTTGTGGTGGAC 57.077 36.000 0.00 0.00 42.20 4.02
2502 3122 7.164230 TGAACTTGCAACTAGAAAGGAAAAA 57.836 32.000 0.00 0.00 37.18 1.94
2503 3123 6.767524 TGAACTTGCAACTAGAAAGGAAAA 57.232 33.333 0.00 0.00 37.18 2.29
2504 3124 6.545666 TGATGAACTTGCAACTAGAAAGGAAA 59.454 34.615 0.00 0.00 37.18 3.13
2505 3125 6.061441 TGATGAACTTGCAACTAGAAAGGAA 58.939 36.000 0.00 0.00 37.18 3.36
2506 3126 5.620206 TGATGAACTTGCAACTAGAAAGGA 58.380 37.500 0.00 0.00 37.18 3.36
2507 3127 5.947228 TGATGAACTTGCAACTAGAAAGG 57.053 39.130 0.00 0.00 37.18 3.11
2508 3128 7.137490 TGATGATGAACTTGCAACTAGAAAG 57.863 36.000 0.00 0.00 38.98 2.62
2509 3129 7.229306 AGTTGATGATGAACTTGCAACTAGAAA 59.771 33.333 0.00 0.00 42.69 2.52
2510 3130 6.712095 AGTTGATGATGAACTTGCAACTAGAA 59.288 34.615 0.00 0.00 42.69 2.10
2511 3131 6.233434 AGTTGATGATGAACTTGCAACTAGA 58.767 36.000 0.00 0.00 42.69 2.43
2512 3132 6.492007 AGTTGATGATGAACTTGCAACTAG 57.508 37.500 0.00 0.00 42.69 2.57
2513 3133 6.882610 AAGTTGATGATGAACTTGCAACTA 57.117 33.333 9.19 0.00 43.41 2.24
2514 3134 5.779529 AAGTTGATGATGAACTTGCAACT 57.220 34.783 9.19 0.00 45.36 3.16
2520 3140 5.708697 TCAGATGCAAGTTGATGATGAACTT 59.291 36.000 7.16 4.15 43.01 2.66
2521 3141 5.250982 TCAGATGCAAGTTGATGATGAACT 58.749 37.500 7.16 0.00 35.08 3.01
2522 3142 5.448768 CCTCAGATGCAAGTTGATGATGAAC 60.449 44.000 7.16 0.00 0.00 3.18
2523 3143 4.638865 CCTCAGATGCAAGTTGATGATGAA 59.361 41.667 7.16 0.00 0.00 2.57
2524 3144 4.196971 CCTCAGATGCAAGTTGATGATGA 58.803 43.478 7.16 4.29 0.00 2.92
2525 3145 3.243101 GCCTCAGATGCAAGTTGATGATG 60.243 47.826 7.16 3.44 0.00 3.07
2526 3146 2.950309 GCCTCAGATGCAAGTTGATGAT 59.050 45.455 7.16 0.00 0.00 2.45
2527 3147 2.362736 GCCTCAGATGCAAGTTGATGA 58.637 47.619 7.16 3.94 0.00 2.92
2528 3148 1.404391 GGCCTCAGATGCAAGTTGATG 59.596 52.381 7.16 0.00 0.00 3.07
2529 3149 1.284198 AGGCCTCAGATGCAAGTTGAT 59.716 47.619 7.16 0.00 0.00 2.57
2530 3150 0.694771 AGGCCTCAGATGCAAGTTGA 59.305 50.000 7.16 0.00 0.00 3.18
2531 3151 0.809385 CAGGCCTCAGATGCAAGTTG 59.191 55.000 0.00 0.00 0.00 3.16
2532 3152 0.694771 TCAGGCCTCAGATGCAAGTT 59.305 50.000 0.00 0.00 0.00 2.66
2533 3153 0.917533 ATCAGGCCTCAGATGCAAGT 59.082 50.000 0.00 0.00 0.00 3.16
2534 3154 1.141254 AGATCAGGCCTCAGATGCAAG 59.859 52.381 10.22 0.00 0.00 4.01
2535 3155 1.210538 AGATCAGGCCTCAGATGCAA 58.789 50.000 10.22 0.00 0.00 4.08
2536 3156 1.140452 GAAGATCAGGCCTCAGATGCA 59.860 52.381 10.22 0.00 0.00 3.96
2537 3157 1.417145 AGAAGATCAGGCCTCAGATGC 59.583 52.381 10.22 3.15 0.00 3.91
2538 3158 3.842007 AAGAAGATCAGGCCTCAGATG 57.158 47.619 10.22 0.00 0.00 2.90
2539 3159 4.018597 ACAAAAGAAGATCAGGCCTCAGAT 60.019 41.667 0.00 3.06 0.00 2.90
2540 3160 3.328931 ACAAAAGAAGATCAGGCCTCAGA 59.671 43.478 0.00 0.00 0.00 3.27
2541 3161 3.683802 ACAAAAGAAGATCAGGCCTCAG 58.316 45.455 0.00 0.00 0.00 3.35
2542 3162 3.560025 GGACAAAAGAAGATCAGGCCTCA 60.560 47.826 0.00 0.00 0.00 3.86
2543 3163 3.013219 GGACAAAAGAAGATCAGGCCTC 58.987 50.000 0.00 0.00 0.00 4.70
2544 3164 2.291217 GGGACAAAAGAAGATCAGGCCT 60.291 50.000 0.00 0.00 0.00 5.19
2545 3165 2.095461 GGGACAAAAGAAGATCAGGCC 58.905 52.381 0.00 0.00 0.00 5.19
2546 3166 2.751806 CTGGGACAAAAGAAGATCAGGC 59.248 50.000 0.00 0.00 38.70 4.85
2547 3167 2.751806 GCTGGGACAAAAGAAGATCAGG 59.248 50.000 0.00 0.00 38.70 3.86
2548 3168 3.439476 CAGCTGGGACAAAAGAAGATCAG 59.561 47.826 5.57 0.00 38.70 2.90
2549 3169 3.415212 CAGCTGGGACAAAAGAAGATCA 58.585 45.455 5.57 0.00 38.70 2.92
2550 3170 2.163211 GCAGCTGGGACAAAAGAAGATC 59.837 50.000 17.12 0.00 38.70 2.75
2551 3171 2.165998 GCAGCTGGGACAAAAGAAGAT 58.834 47.619 17.12 0.00 38.70 2.40
2552 3172 1.133823 TGCAGCTGGGACAAAAGAAGA 60.134 47.619 17.12 0.00 38.70 2.87
2553 3173 1.321474 TGCAGCTGGGACAAAAGAAG 58.679 50.000 17.12 0.00 38.70 2.85
2554 3174 1.774110 TTGCAGCTGGGACAAAAGAA 58.226 45.000 17.12 0.00 38.70 2.52
2555 3175 1.888512 GATTGCAGCTGGGACAAAAGA 59.111 47.619 17.12 0.00 38.70 2.52
2556 3176 1.067354 GGATTGCAGCTGGGACAAAAG 60.067 52.381 17.12 0.00 38.70 2.27
2557 3177 0.968405 GGATTGCAGCTGGGACAAAA 59.032 50.000 17.12 0.00 38.70 2.44
2558 3178 0.112995 AGGATTGCAGCTGGGACAAA 59.887 50.000 17.12 0.00 38.70 2.83
2559 3179 0.991146 TAGGATTGCAGCTGGGACAA 59.009 50.000 17.12 11.70 38.70 3.18
2560 3180 1.141657 GATAGGATTGCAGCTGGGACA 59.858 52.381 17.12 1.56 0.00 4.02
2561 3181 1.544314 GGATAGGATTGCAGCTGGGAC 60.544 57.143 17.12 0.00 0.00 4.46
2562 3182 0.767375 GGATAGGATTGCAGCTGGGA 59.233 55.000 17.12 0.00 0.00 4.37
2563 3183 0.769873 AGGATAGGATTGCAGCTGGG 59.230 55.000 17.12 0.00 0.00 4.45
2564 3184 1.607509 CGAGGATAGGATTGCAGCTGG 60.608 57.143 17.12 0.00 0.00 4.85
2565 3185 1.342496 TCGAGGATAGGATTGCAGCTG 59.658 52.381 10.11 10.11 0.00 4.24
2566 3186 1.342819 GTCGAGGATAGGATTGCAGCT 59.657 52.381 0.00 0.00 0.00 4.24
2567 3187 1.342819 AGTCGAGGATAGGATTGCAGC 59.657 52.381 0.00 0.00 0.00 5.25
2568 3188 2.351253 CGAGTCGAGGATAGGATTGCAG 60.351 54.545 6.73 0.00 0.00 4.41
2569 3189 1.609072 CGAGTCGAGGATAGGATTGCA 59.391 52.381 6.73 0.00 0.00 4.08
2570 3190 1.667467 GCGAGTCGAGGATAGGATTGC 60.667 57.143 18.61 0.00 0.00 3.56
2571 3191 1.609072 TGCGAGTCGAGGATAGGATTG 59.391 52.381 18.61 0.00 0.00 2.67
2572 3192 1.982660 TGCGAGTCGAGGATAGGATT 58.017 50.000 18.61 0.00 0.00 3.01
2573 3193 1.982660 TTGCGAGTCGAGGATAGGAT 58.017 50.000 18.61 0.00 0.00 3.24
2574 3194 1.982660 ATTGCGAGTCGAGGATAGGA 58.017 50.000 18.61 0.00 0.00 2.94
2575 3195 2.398498 CAATTGCGAGTCGAGGATAGG 58.602 52.381 18.61 0.00 0.00 2.57
2576 3196 2.398498 CCAATTGCGAGTCGAGGATAG 58.602 52.381 18.61 0.45 0.00 2.08
2577 3197 2.509052 CCAATTGCGAGTCGAGGATA 57.491 50.000 18.61 0.00 0.00 2.59
2578 3198 3.369381 CCAATTGCGAGTCGAGGAT 57.631 52.632 18.61 3.23 0.00 3.24
2579 3199 4.910956 CCAATTGCGAGTCGAGGA 57.089 55.556 18.61 0.57 0.00 3.71


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.