Multiple sequence alignment - TraesCS4D01G186900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G186900 chr4D 100.000 4685 0 0 1 4685 324892486 324897170 0.000000e+00 8652.0
1 TraesCS4D01G186900 chr4D 81.567 217 37 3 4469 4683 314635635 314635850 4.820000e-40 176.0
2 TraesCS4D01G186900 chr4D 80.909 220 41 1 4465 4683 132207571 132207790 6.230000e-39 172.0
3 TraesCS4D01G186900 chr4D 80.365 219 34 6 3694 3906 459382440 459382655 1.750000e-34 158.0
4 TraesCS4D01G186900 chr4D 79.621 211 34 8 3694 3899 354037781 354037575 4.890000e-30 143.0
5 TraesCS4D01G186900 chr4B 92.639 3464 135 53 278 3675 405052066 405055475 0.000000e+00 4874.0
6 TraesCS4D01G186900 chr4B 88.225 552 22 16 3953 4469 405055946 405056489 1.850000e-173 619.0
7 TraesCS4D01G186900 chr4B 93.382 136 8 1 1 136 405051876 405052010 2.860000e-47 200.0
8 TraesCS4D01G186900 chr4B 81.567 217 32 6 3696 3906 574168513 574168727 6.230000e-39 172.0
9 TraesCS4D01G186900 chr4B 90.076 131 11 2 4555 4683 392650336 392650466 8.060000e-38 169.0
10 TraesCS4D01G186900 chr4B 92.982 57 4 0 3901 3957 405055515 405055571 3.000000e-12 84.2
11 TraesCS4D01G186900 chr4B 97.143 35 1 0 244 278 286644384 286644350 5.060000e-05 60.2
12 TraesCS4D01G186900 chr4B 97.143 35 1 0 244 278 625460609 625460643 5.060000e-05 60.2
13 TraesCS4D01G186900 chr4A 92.954 2938 144 34 777 3687 146728870 146725969 0.000000e+00 4220.0
14 TraesCS4D01G186900 chr4A 89.384 584 16 18 3928 4470 146725954 146725376 0.000000e+00 693.0
15 TraesCS4D01G186900 chr4A 80.909 220 39 3 4465 4683 430175408 430175191 2.240000e-38 171.0
16 TraesCS4D01G186900 chr4A 100.000 29 0 0 718 746 146728902 146728874 2.000000e-03 54.7
17 TraesCS4D01G186900 chr2B 79.786 1029 190 17 2148 3164 71738255 71737233 0.000000e+00 732.0
18 TraesCS4D01G186900 chr2B 97.143 35 1 0 244 278 382153820 382153854 5.060000e-05 60.2
19 TraesCS4D01G186900 chr2B 97.143 35 1 0 244 278 725999935 725999901 5.060000e-05 60.2
20 TraesCS4D01G186900 chr2D 79.691 1034 185 21 2148 3164 44898395 44897370 0.000000e+00 723.0
21 TraesCS4D01G186900 chr2A 79.803 1015 185 18 2148 3149 48659368 48660375 0.000000e+00 721.0
22 TraesCS4D01G186900 chr2A 88.764 89 9 1 185 272 458930615 458930527 1.780000e-19 108.0
23 TraesCS4D01G186900 chr7B 83.636 220 26 7 3694 3906 602639122 602638906 1.030000e-46 198.0
24 TraesCS4D01G186900 chr7B 97.143 35 1 0 244 278 66851892 66851858 5.060000e-05 60.2
25 TraesCS4D01G186900 chr7B 94.286 35 2 0 244 278 591630191 591630225 2.000000e-03 54.7
26 TraesCS4D01G186900 chr7B 94.286 35 2 0 244 278 653673178 653673212 2.000000e-03 54.7
27 TraesCS4D01G186900 chr1D 84.080 201 29 3 4484 4683 211417754 211417952 1.720000e-44 191.0
28 TraesCS4D01G186900 chr3D 82.075 212 37 1 4469 4679 373321327 373321116 3.720000e-41 180.0
29 TraesCS4D01G186900 chr3B 81.308 214 26 8 4478 4679 438330530 438330319 1.350000e-35 161.0
30 TraesCS4D01G186900 chr3B 83.908 87 12 2 3694 3780 32435742 32435658 1.080000e-11 82.4
31 TraesCS4D01G186900 chr6D 91.228 114 9 1 4571 4683 164814891 164814778 2.260000e-33 154.0
32 TraesCS4D01G186900 chr6D 81.595 163 21 6 3751 3906 75284500 75284340 4.920000e-25 126.0
33 TraesCS4D01G186900 chr7A 86.822 129 16 1 4556 4683 12204460 12204332 4.890000e-30 143.0
34 TraesCS4D01G186900 chr3A 79.167 216 37 7 3694 3904 431739958 431740170 4.890000e-30 143.0
35 TraesCS4D01G186900 chr5D 78.378 222 37 10 3694 3907 12975525 12975743 2.940000e-27 134.0
36 TraesCS4D01G186900 chr5B 77.130 223 36 11 3694 3906 712006994 712007211 1.070000e-21 115.0
37 TraesCS4D01G186900 chr5B 77.130 223 36 11 3694 3906 712024446 712024663 1.070000e-21 115.0
38 TraesCS4D01G186900 chr5B 96.875 32 1 0 247 278 613807795 613807764 2.000000e-03 54.7
39 TraesCS4D01G186900 chr1B 97.143 35 1 0 244 278 76792662 76792628 5.060000e-05 60.2
40 TraesCS4D01G186900 chr1B 97.143 35 1 0 244 278 140604463 140604497 5.060000e-05 60.2
41 TraesCS4D01G186900 chr1B 97.143 35 1 0 244 278 313318932 313318898 5.060000e-05 60.2
42 TraesCS4D01G186900 chr1B 94.286 35 2 0 244 278 410915969 410915935 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G186900 chr4D 324892486 324897170 4684 False 8652.0 8652 100.000000 1 4685 1 chr4D.!!$F3 4684
1 TraesCS4D01G186900 chr4B 405051876 405056489 4613 False 1444.3 4874 91.807000 1 4469 4 chr4B.!!$F4 4468
2 TraesCS4D01G186900 chr4A 146725376 146728902 3526 True 1655.9 4220 94.112667 718 4470 3 chr4A.!!$R2 3752
3 TraesCS4D01G186900 chr2B 71737233 71738255 1022 True 732.0 732 79.786000 2148 3164 1 chr2B.!!$R1 1016
4 TraesCS4D01G186900 chr2D 44897370 44898395 1025 True 723.0 723 79.691000 2148 3164 1 chr2D.!!$R1 1016
5 TraesCS4D01G186900 chr2A 48659368 48660375 1007 False 721.0 721 79.803000 2148 3149 1 chr2A.!!$F1 1001

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
177 190 0.034198 TAGTAACTGCCTGCGTTGCA 59.966 50.0 13.58 0.0 36.92 4.08 F
661 708 0.038526 CACACCCTACGCGAGACTTT 60.039 55.0 15.93 0.0 0.00 2.66 F
1400 1474 0.108585 TTGACTCCACAAGCAGGGTC 59.891 55.0 0.00 0.0 0.00 4.46 F
2096 2180 0.179124 GCTTCGATGTCTCCGAGCTT 60.179 55.0 0.00 0.0 37.35 3.74 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2168 2252 0.239347 CCAGGTGAAAGCAAGCTTCG 59.761 55.000 7.88 0.00 36.26 3.79 R
3574 3676 0.599991 ACAAGACAAGATGCGTCGCA 60.600 50.000 24.05 24.05 44.86 5.10 R
3632 3740 3.058016 ACAACTCGCATTCAACAAGATGG 60.058 43.478 0.00 0.00 0.00 3.51 R
4501 5065 0.103390 TTCGAACGAACACAGCCTCA 59.897 50.000 5.53 0.00 0.00 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 1.549170 ACTGGGATACGTGGACTGTTC 59.451 52.381 0.00 0.00 37.60 3.18
59 60 6.001460 TCAAAAGTTTCCAGATTCCGTGTAT 58.999 36.000 0.00 0.00 0.00 2.29
68 69 2.238646 AGATTCCGTGTATTGGCAGGAA 59.761 45.455 6.15 6.15 43.98 3.36
91 92 6.903883 AGCACACAAGTAATAATAACTCGG 57.096 37.500 0.00 0.00 0.00 4.63
95 96 7.345192 CACACAAGTAATAATAACTCGGATGC 58.655 38.462 0.00 0.00 0.00 3.91
111 112 1.394917 GATGCGATGCGATTGGATACC 59.605 52.381 0.00 0.00 0.00 2.73
122 123 4.730657 CGATTGGATACCCGTATACAGTC 58.269 47.826 10.93 10.93 37.65 3.51
124 125 5.645067 CGATTGGATACCCGTATACAGTCTA 59.355 44.000 16.26 0.00 39.55 2.59
125 126 6.402983 CGATTGGATACCCGTATACAGTCTAC 60.403 46.154 16.26 0.00 39.55 2.59
126 127 5.308976 TGGATACCCGTATACAGTCTACA 57.691 43.478 3.32 0.00 31.72 2.74
129 130 6.779049 TGGATACCCGTATACAGTCTACATTT 59.221 38.462 3.32 0.00 31.72 2.32
130 131 7.944000 TGGATACCCGTATACAGTCTACATTTA 59.056 37.037 3.32 0.00 31.72 1.40
131 132 8.964772 GGATACCCGTATACAGTCTACATTTAT 58.035 37.037 3.32 0.00 0.00 1.40
132 133 9.784680 GATACCCGTATACAGTCTACATTTATG 57.215 37.037 3.32 0.00 0.00 1.90
133 134 7.828508 ACCCGTATACAGTCTACATTTATGA 57.171 36.000 3.32 0.00 0.00 2.15
155 168 7.936950 TGAGTATTTCTGCAAGATATCTTCG 57.063 36.000 15.24 11.70 46.36 3.79
156 169 7.492524 TGAGTATTTCTGCAAGATATCTTCGT 58.507 34.615 15.24 0.00 46.36 3.85
157 170 8.630037 TGAGTATTTCTGCAAGATATCTTCGTA 58.370 33.333 15.24 9.56 46.36 3.43
158 171 9.632807 GAGTATTTCTGCAAGATATCTTCGTAT 57.367 33.333 15.24 6.23 46.36 3.06
164 177 9.894783 TTCTGCAAGATATCTTCGTATAGTAAC 57.105 33.333 15.24 0.00 46.36 2.50
165 178 9.286170 TCTGCAAGATATCTTCGTATAGTAACT 57.714 33.333 15.24 0.00 38.67 2.24
166 179 9.335891 CTGCAAGATATCTTCGTATAGTAACTG 57.664 37.037 15.24 1.73 34.07 3.16
167 180 7.808381 TGCAAGATATCTTCGTATAGTAACTGC 59.192 37.037 15.24 11.75 33.11 4.40
168 181 7.273815 GCAAGATATCTTCGTATAGTAACTGCC 59.726 40.741 15.24 0.00 33.11 4.85
169 182 8.516234 CAAGATATCTTCGTATAGTAACTGCCT 58.484 37.037 15.24 0.00 33.11 4.75
170 183 8.046294 AGATATCTTCGTATAGTAACTGCCTG 57.954 38.462 0.00 0.00 0.00 4.85
171 184 4.303086 TCTTCGTATAGTAACTGCCTGC 57.697 45.455 0.00 0.00 0.00 4.85
172 185 2.768833 TCGTATAGTAACTGCCTGCG 57.231 50.000 0.00 0.00 0.00 5.18
173 186 2.019249 TCGTATAGTAACTGCCTGCGT 58.981 47.619 0.00 0.00 0.00 5.24
174 187 2.424601 TCGTATAGTAACTGCCTGCGTT 59.575 45.455 5.12 5.12 0.00 4.84
175 188 2.534349 CGTATAGTAACTGCCTGCGTTG 59.466 50.000 8.78 0.00 0.00 4.10
176 189 1.369625 ATAGTAACTGCCTGCGTTGC 58.630 50.000 8.78 7.75 0.00 4.17
177 190 0.034198 TAGTAACTGCCTGCGTTGCA 59.966 50.000 13.58 0.00 36.92 4.08
178 191 0.606401 AGTAACTGCCTGCGTTGCAT 60.606 50.000 13.58 2.09 38.13 3.96
179 192 0.240945 GTAACTGCCTGCGTTGCATT 59.759 50.000 8.78 0.00 38.13 3.56
180 193 0.240678 TAACTGCCTGCGTTGCATTG 59.759 50.000 8.78 0.00 38.13 2.82
181 194 2.807895 CTGCCTGCGTTGCATTGC 60.808 61.111 0.46 0.46 38.13 3.56
182 195 3.277211 CTGCCTGCGTTGCATTGCT 62.277 57.895 10.49 0.00 38.13 3.91
183 196 1.925415 CTGCCTGCGTTGCATTGCTA 61.925 55.000 10.49 0.00 38.13 3.49
184 197 1.514873 GCCTGCGTTGCATTGCTAC 60.515 57.895 12.40 12.40 38.13 3.58
185 198 1.926511 GCCTGCGTTGCATTGCTACT 61.927 55.000 18.58 0.00 38.13 2.57
186 199 1.368641 CCTGCGTTGCATTGCTACTA 58.631 50.000 18.58 8.64 38.13 1.82
187 200 1.328680 CCTGCGTTGCATTGCTACTAG 59.671 52.381 18.58 15.65 38.13 2.57
188 201 2.270923 CTGCGTTGCATTGCTACTAGA 58.729 47.619 18.58 4.27 38.13 2.43
189 202 2.672874 CTGCGTTGCATTGCTACTAGAA 59.327 45.455 18.58 1.17 38.13 2.10
190 203 3.070748 TGCGTTGCATTGCTACTAGAAA 58.929 40.909 18.58 0.00 32.61 2.52
191 204 3.500299 TGCGTTGCATTGCTACTAGAAAA 59.500 39.130 18.58 0.00 32.61 2.29
192 205 4.155826 TGCGTTGCATTGCTACTAGAAAAT 59.844 37.500 18.58 0.00 32.61 1.82
193 206 5.095490 GCGTTGCATTGCTACTAGAAAATT 58.905 37.500 18.58 0.00 32.61 1.82
194 207 5.003778 GCGTTGCATTGCTACTAGAAAATTG 59.996 40.000 18.58 3.85 32.61 2.32
195 208 6.086222 CGTTGCATTGCTACTAGAAAATTGT 58.914 36.000 18.58 0.00 32.61 2.71
196 209 6.032775 CGTTGCATTGCTACTAGAAAATTGTG 59.967 38.462 18.58 0.00 32.61 3.33
197 210 5.401550 TGCATTGCTACTAGAAAATTGTGC 58.598 37.500 10.49 0.00 0.00 4.57
198 211 4.496895 GCATTGCTACTAGAAAATTGTGCG 59.503 41.667 0.16 0.00 0.00 5.34
199 212 5.631026 CATTGCTACTAGAAAATTGTGCGT 58.369 37.500 0.00 0.00 0.00 5.24
200 213 4.661993 TGCTACTAGAAAATTGTGCGTG 57.338 40.909 0.00 0.00 0.00 5.34
201 214 3.435327 TGCTACTAGAAAATTGTGCGTGG 59.565 43.478 0.00 0.00 0.00 4.94
202 215 3.435671 GCTACTAGAAAATTGTGCGTGGT 59.564 43.478 0.00 0.00 0.00 4.16
203 216 4.083484 GCTACTAGAAAATTGTGCGTGGTT 60.083 41.667 0.00 0.00 0.00 3.67
204 217 4.223320 ACTAGAAAATTGTGCGTGGTTG 57.777 40.909 0.00 0.00 0.00 3.77
205 218 2.507339 AGAAAATTGTGCGTGGTTGG 57.493 45.000 0.00 0.00 0.00 3.77
206 219 2.028130 AGAAAATTGTGCGTGGTTGGA 58.972 42.857 0.00 0.00 0.00 3.53
207 220 2.034558 AGAAAATTGTGCGTGGTTGGAG 59.965 45.455 0.00 0.00 0.00 3.86
208 221 1.398692 AAATTGTGCGTGGTTGGAGT 58.601 45.000 0.00 0.00 0.00 3.85
209 222 0.951558 AATTGTGCGTGGTTGGAGTC 59.048 50.000 0.00 0.00 0.00 3.36
210 223 0.179032 ATTGTGCGTGGTTGGAGTCA 60.179 50.000 0.00 0.00 0.00 3.41
211 224 0.813610 TTGTGCGTGGTTGGAGTCAG 60.814 55.000 0.00 0.00 0.00 3.51
212 225 1.069090 GTGCGTGGTTGGAGTCAGA 59.931 57.895 0.00 0.00 0.00 3.27
213 226 0.320771 GTGCGTGGTTGGAGTCAGAT 60.321 55.000 0.00 0.00 0.00 2.90
214 227 0.396435 TGCGTGGTTGGAGTCAGATT 59.604 50.000 0.00 0.00 0.00 2.40
215 228 1.202758 TGCGTGGTTGGAGTCAGATTT 60.203 47.619 0.00 0.00 0.00 2.17
216 229 1.464997 GCGTGGTTGGAGTCAGATTTC 59.535 52.381 0.00 0.00 0.00 2.17
217 230 2.872038 GCGTGGTTGGAGTCAGATTTCT 60.872 50.000 0.00 0.00 0.00 2.52
218 231 2.738846 CGTGGTTGGAGTCAGATTTCTG 59.261 50.000 0.97 0.97 45.08 3.02
219 232 2.485814 GTGGTTGGAGTCAGATTTCTGC 59.514 50.000 2.60 0.00 43.46 4.26
220 233 2.087646 GGTTGGAGTCAGATTTCTGCC 58.912 52.381 2.60 0.00 43.46 4.85
221 234 2.290577 GGTTGGAGTCAGATTTCTGCCT 60.291 50.000 2.60 0.00 43.46 4.75
222 235 3.416156 GTTGGAGTCAGATTTCTGCCTT 58.584 45.455 2.60 0.00 43.46 4.35
223 236 3.063510 TGGAGTCAGATTTCTGCCTTG 57.936 47.619 2.60 0.00 43.46 3.61
224 237 2.290514 TGGAGTCAGATTTCTGCCTTGG 60.291 50.000 2.60 0.00 43.46 3.61
225 238 2.290577 GGAGTCAGATTTCTGCCTTGGT 60.291 50.000 2.60 0.00 43.46 3.67
226 239 3.006247 GAGTCAGATTTCTGCCTTGGTC 58.994 50.000 2.60 0.00 43.46 4.02
227 240 2.087646 GTCAGATTTCTGCCTTGGTCC 58.912 52.381 2.60 0.00 43.46 4.46
228 241 1.704628 TCAGATTTCTGCCTTGGTCCA 59.295 47.619 2.60 0.00 43.46 4.02
229 242 2.309755 TCAGATTTCTGCCTTGGTCCAT 59.690 45.455 2.60 0.00 43.46 3.41
230 243 2.426024 CAGATTTCTGCCTTGGTCCATG 59.574 50.000 0.00 0.00 37.15 3.66
231 244 1.135721 GATTTCTGCCTTGGTCCATGC 59.864 52.381 6.90 6.90 0.00 4.06
232 245 0.178967 TTTCTGCCTTGGTCCATGCA 60.179 50.000 14.10 14.10 0.00 3.96
233 246 0.040058 TTCTGCCTTGGTCCATGCAT 59.960 50.000 14.94 0.00 32.53 3.96
234 247 0.040058 TCTGCCTTGGTCCATGCATT 59.960 50.000 14.94 0.00 32.53 3.56
235 248 0.899720 CTGCCTTGGTCCATGCATTT 59.100 50.000 14.94 0.00 32.53 2.32
236 249 1.276989 CTGCCTTGGTCCATGCATTTT 59.723 47.619 14.94 0.00 32.53 1.82
237 250 1.002201 TGCCTTGGTCCATGCATTTTG 59.998 47.619 11.52 0.00 0.00 2.44
238 251 1.676615 GCCTTGGTCCATGCATTTTGG 60.677 52.381 0.00 0.00 35.45 3.28
239 252 1.624813 CCTTGGTCCATGCATTTTGGT 59.375 47.619 0.00 0.00 35.64 3.67
240 253 2.354003 CCTTGGTCCATGCATTTTGGTC 60.354 50.000 0.00 0.00 35.64 4.02
241 254 2.307496 TGGTCCATGCATTTTGGTCT 57.693 45.000 0.00 0.00 35.64 3.85
242 255 3.448093 TGGTCCATGCATTTTGGTCTA 57.552 42.857 0.00 0.00 35.64 2.59
243 256 3.355378 TGGTCCATGCATTTTGGTCTAG 58.645 45.455 0.00 0.00 35.64 2.43
244 257 2.689983 GGTCCATGCATTTTGGTCTAGG 59.310 50.000 0.00 0.00 35.64 3.02
245 258 2.689983 GTCCATGCATTTTGGTCTAGGG 59.310 50.000 0.00 0.00 35.64 3.53
246 259 2.580322 TCCATGCATTTTGGTCTAGGGA 59.420 45.455 0.00 0.00 35.64 4.20
247 260 2.689983 CCATGCATTTTGGTCTAGGGAC 59.310 50.000 0.00 0.00 41.43 4.46
260 273 4.812653 GTCTAGGGACCTATAAACCCAGA 58.187 47.826 0.00 0.00 45.43 3.86
261 274 4.588106 GTCTAGGGACCTATAAACCCAGAC 59.412 50.000 1.57 1.57 45.43 3.51
262 275 2.395619 AGGGACCTATAAACCCAGACG 58.604 52.381 0.00 0.00 45.43 4.18
263 276 1.415289 GGGACCTATAAACCCAGACGG 59.585 57.143 0.00 0.00 42.81 4.79
264 277 2.391678 GGACCTATAAACCCAGACGGA 58.608 52.381 0.00 0.00 34.64 4.69
269 282 3.573110 CCTATAAACCCAGACGGAGGTAG 59.427 52.174 0.00 0.00 34.45 3.18
280 304 5.535406 CCAGACGGAGGTAGTATTTGTCTAT 59.465 44.000 0.00 0.00 33.76 1.98
284 308 5.535406 ACGGAGGTAGTATTTGTCTATGAGG 59.465 44.000 0.00 0.00 0.00 3.86
329 353 5.625721 CACGTTTTGTGGCAAAATATAACGA 59.374 36.000 24.77 0.00 45.21 3.85
337 361 8.458573 TGTGGCAAAATATAACGATTAGGATT 57.541 30.769 0.00 0.00 0.00 3.01
357 381 2.409948 AGGAGGAAATGCTGCACTAC 57.590 50.000 3.57 0.00 0.00 2.73
379 403 4.634443 ACAGCACGAATATTCTGGGTTAAC 59.366 41.667 13.45 0.00 0.00 2.01
392 416 7.406031 TTCTGGGTTAACTGTATCTACTCAG 57.594 40.000 5.42 0.00 38.40 3.35
401 425 4.340666 ACTGTATCTACTCAGCATGTCCAG 59.659 45.833 0.00 0.00 37.40 3.86
403 427 4.582240 TGTATCTACTCAGCATGTCCAGAG 59.418 45.833 0.00 0.00 37.40 3.35
407 431 0.179078 CTCAGCATGTCCAGAGGAGC 60.179 60.000 0.00 0.00 37.40 4.70
417 441 2.283532 AGAGGAGCAGAGCCGTGT 60.284 61.111 0.00 0.00 0.00 4.49
420 462 0.246635 GAGGAGCAGAGCCGTGTAAA 59.753 55.000 0.00 0.00 0.00 2.01
431 473 6.607689 CAGAGCCGTGTAAATTTATTGAACA 58.392 36.000 0.31 0.00 0.00 3.18
441 483 9.601971 TGTAAATTTATTGAACAGAAAGCGTAC 57.398 29.630 0.31 0.00 0.00 3.67
442 484 7.775729 AAATTTATTGAACAGAAAGCGTACG 57.224 32.000 11.84 11.84 0.00 3.67
469 511 8.612619 CGGCTTTAAAATGAATGATACTGTAGT 58.387 33.333 0.00 0.00 0.00 2.73
498 540 8.420374 AAATAAGCGAGAGAATAAACGAATCA 57.580 30.769 0.00 0.00 0.00 2.57
502 544 4.745125 GCGAGAGAATAAACGAATCATCCA 59.255 41.667 0.00 0.00 0.00 3.41
508 550 7.829211 AGAGAATAAACGAATCATCCAAAGGAA 59.171 33.333 0.00 0.00 34.34 3.36
578 620 1.203187 TGGGTACAGAGCAAGGAGAGT 60.203 52.381 0.00 0.00 0.00 3.24
588 630 2.042433 AGCAAGGAGAGTGAGGAGTAGT 59.958 50.000 0.00 0.00 0.00 2.73
598 640 1.538876 AGGAGTAGTGGGGCAGCAA 60.539 57.895 0.00 0.00 0.00 3.91
614 661 3.368843 GCAGCAACACTATTCTCTCTCCA 60.369 47.826 0.00 0.00 0.00 3.86
661 708 0.038526 CACACCCTACGCGAGACTTT 60.039 55.000 15.93 0.00 0.00 2.66
715 762 1.127343 GAGTGAGGAAGGGGAGATGG 58.873 60.000 0.00 0.00 0.00 3.51
751 798 1.609783 GCCAGCTAGGATGGGTGTT 59.390 57.895 4.00 0.00 44.06 3.32
866 921 2.978156 TGCCATCATATTCCCCTTCC 57.022 50.000 0.00 0.00 0.00 3.46
867 922 1.428912 TGCCATCATATTCCCCTTCCC 59.571 52.381 0.00 0.00 0.00 3.97
868 923 1.272704 GCCATCATATTCCCCTTCCCC 60.273 57.143 0.00 0.00 0.00 4.81
1051 1120 1.153745 CTTCTCTTCCGGTCCAGCG 60.154 63.158 0.00 0.00 0.00 5.18
1061 1130 4.083862 GTCCAGCGTCCCCTGTCC 62.084 72.222 0.00 0.00 0.00 4.02
1063 1132 3.322466 CCAGCGTCCCCTGTCCTT 61.322 66.667 0.00 0.00 0.00 3.36
1105 1177 2.822701 GGGTGGGTTCGCCGATTC 60.823 66.667 0.00 0.00 44.27 2.52
1143 1215 1.316706 CGGTCTCCTCGCCTTCTTCT 61.317 60.000 0.00 0.00 0.00 2.85
1146 1218 0.900182 TCTCCTCGCCTTCTTCTGCA 60.900 55.000 0.00 0.00 0.00 4.41
1234 1306 2.894387 GCTCACAGCTGGGCGATC 60.894 66.667 19.93 3.47 38.45 3.69
1235 1307 2.898738 CTCACAGCTGGGCGATCT 59.101 61.111 19.93 0.00 0.00 2.75
1236 1308 1.521010 CTCACAGCTGGGCGATCTG 60.521 63.158 19.93 5.22 0.00 2.90
1237 1309 1.953231 CTCACAGCTGGGCGATCTGA 61.953 60.000 19.93 9.62 0.00 3.27
1240 1312 1.047596 ACAGCTGGGCGATCTGAGAT 61.048 55.000 19.93 0.00 0.00 2.75
1269 1341 6.884295 TCTCCACTCCACATTATTTACTTTGG 59.116 38.462 0.00 0.00 0.00 3.28
1316 1388 1.228398 TTCTTGCCACGCCAATGGA 60.228 52.632 2.05 0.00 43.02 3.41
1319 1391 2.327002 CTTGCCACGCCAATGGATCG 62.327 60.000 2.05 0.00 43.02 3.69
1400 1474 0.108585 TTGACTCCACAAGCAGGGTC 59.891 55.000 0.00 0.00 0.00 4.46
1459 1533 3.080319 GCTTCTTTGAGCTGAGAACCAT 58.920 45.455 0.00 0.00 39.57 3.55
1462 1536 5.443185 TTCTTTGAGCTGAGAACCATTTG 57.557 39.130 0.00 0.00 0.00 2.32
1493 1574 0.597568 CATGGCGTGCCTTTTCTTCA 59.402 50.000 12.84 0.00 36.94 3.02
1606 1690 4.933134 CCCCCAAAAATCCATCCATTTTT 58.067 39.130 0.00 0.00 43.63 1.94
1628 1712 2.419297 GCTGTCTCGAATTGGTCCATCT 60.419 50.000 0.00 0.00 0.00 2.90
1629 1713 3.181475 GCTGTCTCGAATTGGTCCATCTA 60.181 47.826 0.00 0.00 0.00 1.98
1687 1771 4.664891 GCAAAAATCTCATGCTTGTTTCGC 60.665 41.667 0.00 0.00 37.12 4.70
2054 2138 4.803426 GCGGCCGAGACTGACAGG 62.803 72.222 33.48 0.00 0.00 4.00
2096 2180 0.179124 GCTTCGATGTCTCCGAGCTT 60.179 55.000 0.00 0.00 37.35 3.74
2168 2252 2.285442 AGGTACCTGGTCCTGGGC 60.285 66.667 15.42 10.59 32.29 5.36
3185 3287 1.592400 GCCCAAGCAGCAACAACAC 60.592 57.895 0.00 0.00 39.53 3.32
3553 3655 6.910433 CGCTATTGTACAGTTTTGTGTTCTTT 59.090 34.615 0.00 0.00 38.23 2.52
3656 3764 4.630894 TCTTGTTGAATGCGAGTTGTTT 57.369 36.364 0.00 0.00 0.00 2.83
3657 3765 4.992688 TCTTGTTGAATGCGAGTTGTTTT 58.007 34.783 0.00 0.00 0.00 2.43
3671 3806 6.252281 CGAGTTGTTTTACAGTGCAGTAAAA 58.748 36.000 16.04 16.04 46.16 1.52
3682 3817 5.297029 ACAGTGCAGTAAAAGTTCTCTTTCC 59.703 40.000 0.00 0.00 42.26 3.13
3689 3824 7.871463 GCAGTAAAAGTTCTCTTTCCTGTACTA 59.129 37.037 15.11 0.00 42.26 1.82
3690 3825 9.194271 CAGTAAAAGTTCTCTTTCCTGTACTAC 57.806 37.037 0.00 0.00 42.26 2.73
3691 3826 8.081025 AGTAAAAGTTCTCTTTCCTGTACTACG 58.919 37.037 0.00 0.00 42.26 3.51
3693 3828 6.402456 AAGTTCTCTTTCCTGTACTACGTT 57.598 37.500 0.00 0.00 0.00 3.99
3695 3830 6.214399 AGTTCTCTTTCCTGTACTACGTTTG 58.786 40.000 0.00 0.00 0.00 2.93
3698 3833 4.874970 TCTTTCCTGTACTACGTTTGGTC 58.125 43.478 0.00 0.00 0.00 4.02
3699 3834 3.665745 TTCCTGTACTACGTTTGGTCC 57.334 47.619 0.00 0.00 0.00 4.46
3700 3835 1.895131 TCCTGTACTACGTTTGGTCCC 59.105 52.381 0.00 0.00 0.00 4.46
3701 3836 1.066645 CCTGTACTACGTTTGGTCCCC 60.067 57.143 0.00 0.00 0.00 4.81
3702 3837 1.897802 CTGTACTACGTTTGGTCCCCT 59.102 52.381 0.00 0.00 0.00 4.79
3703 3838 2.301009 CTGTACTACGTTTGGTCCCCTT 59.699 50.000 0.00 0.00 0.00 3.95
3704 3839 2.299867 TGTACTACGTTTGGTCCCCTTC 59.700 50.000 0.00 0.00 0.00 3.46
3705 3840 0.319405 ACTACGTTTGGTCCCCTTCG 59.681 55.000 0.00 0.00 0.00 3.79
3706 3841 0.319405 CTACGTTTGGTCCCCTTCGT 59.681 55.000 0.00 0.00 35.73 3.85
3707 3842 1.545582 CTACGTTTGGTCCCCTTCGTA 59.454 52.381 0.00 0.00 33.70 3.43
3708 3843 0.978907 ACGTTTGGTCCCCTTCGTAT 59.021 50.000 0.00 0.00 0.00 3.06
3709 3844 1.348696 ACGTTTGGTCCCCTTCGTATT 59.651 47.619 0.00 0.00 0.00 1.89
3710 3845 2.224597 ACGTTTGGTCCCCTTCGTATTT 60.225 45.455 0.00 0.00 0.00 1.40
3711 3846 2.815503 CGTTTGGTCCCCTTCGTATTTT 59.184 45.455 0.00 0.00 0.00 1.82
3712 3847 3.365565 CGTTTGGTCCCCTTCGTATTTTG 60.366 47.826 0.00 0.00 0.00 2.44
3713 3848 3.512219 TTGGTCCCCTTCGTATTTTGT 57.488 42.857 0.00 0.00 0.00 2.83
3714 3849 2.785562 TGGTCCCCTTCGTATTTTGTG 58.214 47.619 0.00 0.00 0.00 3.33
3715 3850 1.471287 GGTCCCCTTCGTATTTTGTGC 59.529 52.381 0.00 0.00 0.00 4.57
3716 3851 2.433436 GTCCCCTTCGTATTTTGTGCT 58.567 47.619 0.00 0.00 0.00 4.40
3717 3852 3.602483 GTCCCCTTCGTATTTTGTGCTA 58.398 45.455 0.00 0.00 0.00 3.49
3718 3853 4.004982 GTCCCCTTCGTATTTTGTGCTAA 58.995 43.478 0.00 0.00 0.00 3.09
3719 3854 4.456566 GTCCCCTTCGTATTTTGTGCTAAA 59.543 41.667 0.00 0.00 0.00 1.85
3720 3855 5.124936 GTCCCCTTCGTATTTTGTGCTAAAT 59.875 40.000 0.00 0.00 0.00 1.40
3721 3856 5.712917 TCCCCTTCGTATTTTGTGCTAAATT 59.287 36.000 0.00 0.00 0.00 1.82
3722 3857 6.209788 TCCCCTTCGTATTTTGTGCTAAATTT 59.790 34.615 0.00 0.00 0.00 1.82
3723 3858 6.871492 CCCCTTCGTATTTTGTGCTAAATTTT 59.129 34.615 0.00 0.00 0.00 1.82
3724 3859 8.030106 CCCCTTCGTATTTTGTGCTAAATTTTA 58.970 33.333 0.00 0.00 0.00 1.52
3725 3860 9.413048 CCCTTCGTATTTTGTGCTAAATTTTAA 57.587 29.630 0.00 0.00 0.00 1.52
3800 3935 9.926158 TCATTGCATTTGTATTTGAACATAGTT 57.074 25.926 0.00 0.00 0.00 2.24
3803 3938 9.979578 TTGCATTTGTATTTGAACATAGTTTCT 57.020 25.926 0.00 0.00 0.00 2.52
3804 3939 9.409312 TGCATTTGTATTTGAACATAGTTTCTG 57.591 29.630 0.00 0.00 0.00 3.02
3805 3940 9.624697 GCATTTGTATTTGAACATAGTTTCTGA 57.375 29.630 0.00 0.00 0.00 3.27
3893 4028 9.929180 TGAATATCGAAGGACTAATAAATCAGG 57.071 33.333 0.00 0.00 0.00 3.86
3895 4030 9.930693 AATATCGAAGGACTAATAAATCAGGAC 57.069 33.333 0.00 0.00 0.00 3.85
3896 4031 6.158023 TCGAAGGACTAATAAATCAGGACC 57.842 41.667 0.00 0.00 0.00 4.46
3897 4032 4.982916 CGAAGGACTAATAAATCAGGACCG 59.017 45.833 0.00 0.00 0.00 4.79
3898 4033 5.221185 CGAAGGACTAATAAATCAGGACCGA 60.221 44.000 0.00 0.00 0.00 4.69
3899 4034 5.793030 AGGACTAATAAATCAGGACCGAG 57.207 43.478 0.00 0.00 0.00 4.63
3900 4035 4.589374 AGGACTAATAAATCAGGACCGAGG 59.411 45.833 0.00 0.00 0.00 4.63
3901 4036 4.344390 GGACTAATAAATCAGGACCGAGGT 59.656 45.833 0.00 0.00 0.00 3.85
3902 4037 5.537674 GGACTAATAAATCAGGACCGAGGTA 59.462 44.000 0.00 0.00 0.00 3.08
3903 4038 6.294620 GGACTAATAAATCAGGACCGAGGTAG 60.295 46.154 0.00 0.00 0.00 3.18
3904 4039 6.134754 ACTAATAAATCAGGACCGAGGTAGT 58.865 40.000 0.00 0.00 0.00 2.73
3905 4040 7.293073 ACTAATAAATCAGGACCGAGGTAGTA 58.707 38.462 0.00 0.00 0.00 1.82
3952 4087 7.859377 GGTATGATGCACATTTTGAACTCTATG 59.141 37.037 7.02 0.00 40.07 2.23
4008 4523 1.768275 TGCACTCCACCCATATACCTG 59.232 52.381 0.00 0.00 0.00 4.00
4234 4780 1.751927 GTCCAGCTCCTGCCATTGG 60.752 63.158 0.00 0.00 40.80 3.16
4235 4781 2.233566 TCCAGCTCCTGCCATTGGT 61.234 57.895 4.26 0.00 40.80 3.67
4312 4858 1.533731 TCTCTTTTGCCCGCTTTTACG 59.466 47.619 0.00 0.00 0.00 3.18
4327 4873 5.403466 CGCTTTTACGAGTAAACTGTACCTT 59.597 40.000 7.82 0.00 35.05 3.50
4328 4874 6.587651 GCTTTTACGAGTAAACTGTACCTTG 58.412 40.000 7.82 0.00 35.05 3.61
4329 4875 6.347160 GCTTTTACGAGTAAACTGTACCTTGG 60.347 42.308 7.82 0.00 35.05 3.61
4330 4876 3.672767 ACGAGTAAACTGTACCTTGGG 57.327 47.619 0.00 0.00 0.00 4.12
4331 4877 3.233507 ACGAGTAAACTGTACCTTGGGA 58.766 45.455 0.00 0.00 0.00 4.37
4332 4878 3.257624 ACGAGTAAACTGTACCTTGGGAG 59.742 47.826 0.00 0.00 0.00 4.30
4337 4899 4.618920 AAACTGTACCTTGGGAGTACTG 57.381 45.455 0.00 6.45 42.25 2.74
4345 4907 3.326880 ACCTTGGGAGTACTGTACTTTGG 59.673 47.826 20.54 18.02 39.59 3.28
4359 4921 0.895530 CTTTGGAGCCGGTACAGAGA 59.104 55.000 1.90 0.00 0.00 3.10
4361 4923 0.039180 TTGGAGCCGGTACAGAGAGA 59.961 55.000 1.90 0.00 0.00 3.10
4459 5023 3.340034 GTCGTCACCACCAAAATATCCA 58.660 45.455 0.00 0.00 0.00 3.41
4464 5028 3.033184 CACCACCAAAATATCCAGCCAT 58.967 45.455 0.00 0.00 0.00 4.40
4470 5034 3.068590 CCAAAATATCCAGCCATCGCTTT 59.931 43.478 0.00 0.00 45.55 3.51
4471 5035 3.996150 AAATATCCAGCCATCGCTTTG 57.004 42.857 0.00 0.00 45.55 2.77
4472 5036 1.901591 ATATCCAGCCATCGCTTTGG 58.098 50.000 0.00 0.00 45.55 3.28
4478 5042 4.141144 CCATCGCTTTGGCCGTAT 57.859 55.556 0.00 0.00 34.44 3.06
4479 5043 2.404083 CCATCGCTTTGGCCGTATT 58.596 52.632 0.00 0.00 34.44 1.89
4480 5044 0.738389 CCATCGCTTTGGCCGTATTT 59.262 50.000 0.00 0.00 34.44 1.40
4481 5045 1.268539 CCATCGCTTTGGCCGTATTTC 60.269 52.381 0.00 0.00 34.44 2.17
4482 5046 1.670811 CATCGCTTTGGCCGTATTTCT 59.329 47.619 0.00 0.00 34.44 2.52
4483 5047 1.816074 TCGCTTTGGCCGTATTTCTT 58.184 45.000 0.00 0.00 34.44 2.52
4484 5048 2.156098 TCGCTTTGGCCGTATTTCTTT 58.844 42.857 0.00 0.00 34.44 2.52
4485 5049 2.160813 TCGCTTTGGCCGTATTTCTTTC 59.839 45.455 0.00 0.00 34.44 2.62
4486 5050 2.095466 CGCTTTGGCCGTATTTCTTTCA 60.095 45.455 0.00 0.00 34.44 2.69
4487 5051 3.427503 CGCTTTGGCCGTATTTCTTTCAT 60.428 43.478 0.00 0.00 34.44 2.57
4488 5052 4.494484 GCTTTGGCCGTATTTCTTTCATT 58.506 39.130 0.00 0.00 0.00 2.57
4489 5053 4.929211 GCTTTGGCCGTATTTCTTTCATTT 59.071 37.500 0.00 0.00 0.00 2.32
4490 5054 5.163963 GCTTTGGCCGTATTTCTTTCATTTG 60.164 40.000 0.00 0.00 0.00 2.32
4491 5055 4.448537 TGGCCGTATTTCTTTCATTTGG 57.551 40.909 0.00 0.00 0.00 3.28
4492 5056 3.194542 TGGCCGTATTTCTTTCATTTGGG 59.805 43.478 0.00 0.00 0.00 4.12
4493 5057 3.194755 GGCCGTATTTCTTTCATTTGGGT 59.805 43.478 0.00 0.00 0.00 4.51
4494 5058 4.173256 GCCGTATTTCTTTCATTTGGGTG 58.827 43.478 0.00 0.00 0.00 4.61
4495 5059 4.321675 GCCGTATTTCTTTCATTTGGGTGT 60.322 41.667 0.00 0.00 0.00 4.16
4496 5060 5.160641 CCGTATTTCTTTCATTTGGGTGTG 58.839 41.667 0.00 0.00 0.00 3.82
4497 5061 5.160641 CGTATTTCTTTCATTTGGGTGTGG 58.839 41.667 0.00 0.00 0.00 4.17
4498 5062 3.467374 TTTCTTTCATTTGGGTGTGGC 57.533 42.857 0.00 0.00 0.00 5.01
4499 5063 2.079170 TCTTTCATTTGGGTGTGGCA 57.921 45.000 0.00 0.00 0.00 4.92
4500 5064 2.392662 TCTTTCATTTGGGTGTGGCAA 58.607 42.857 0.00 0.00 0.00 4.52
4501 5065 2.971330 TCTTTCATTTGGGTGTGGCAAT 59.029 40.909 0.00 0.00 0.00 3.56
4502 5066 2.835580 TTCATTTGGGTGTGGCAATG 57.164 45.000 0.00 0.00 0.00 2.82
4503 5067 2.006805 TCATTTGGGTGTGGCAATGA 57.993 45.000 0.00 0.00 34.07 2.57
4504 5068 1.894466 TCATTTGGGTGTGGCAATGAG 59.106 47.619 0.00 0.00 32.01 2.90
4505 5069 1.066716 CATTTGGGTGTGGCAATGAGG 60.067 52.381 0.00 0.00 0.00 3.86
4506 5070 1.470996 TTTGGGTGTGGCAATGAGGC 61.471 55.000 0.00 0.00 44.50 4.70
4507 5071 2.036256 GGGTGTGGCAATGAGGCT 59.964 61.111 0.00 0.00 44.55 4.58
4508 5072 2.345760 GGGTGTGGCAATGAGGCTG 61.346 63.158 0.00 0.00 44.55 4.85
4509 5073 1.604593 GGTGTGGCAATGAGGCTGT 60.605 57.895 0.00 0.00 44.55 4.40
4510 5074 1.582968 GTGTGGCAATGAGGCTGTG 59.417 57.895 0.00 0.00 44.55 3.66
4511 5075 1.151221 TGTGGCAATGAGGCTGTGT 59.849 52.632 0.00 0.00 44.55 3.72
4512 5076 0.467844 TGTGGCAATGAGGCTGTGTT 60.468 50.000 0.00 0.00 44.55 3.32
4513 5077 0.242017 GTGGCAATGAGGCTGTGTTC 59.758 55.000 0.00 0.00 44.55 3.18
4514 5078 1.236616 TGGCAATGAGGCTGTGTTCG 61.237 55.000 0.00 0.00 44.55 3.95
4515 5079 1.237285 GGCAATGAGGCTGTGTTCGT 61.237 55.000 0.00 0.00 40.24 3.85
4516 5080 0.593128 GCAATGAGGCTGTGTTCGTT 59.407 50.000 0.00 0.00 0.00 3.85
4517 5081 1.400242 GCAATGAGGCTGTGTTCGTTC 60.400 52.381 0.00 0.00 0.00 3.95
4518 5082 1.136252 CAATGAGGCTGTGTTCGTTCG 60.136 52.381 0.00 0.00 0.00 3.95
4519 5083 0.317160 ATGAGGCTGTGTTCGTTCGA 59.683 50.000 0.00 0.00 0.00 3.71
4520 5084 0.103390 TGAGGCTGTGTTCGTTCGAA 59.897 50.000 3.47 3.47 0.00 3.71
4521 5085 1.270094 TGAGGCTGTGTTCGTTCGAAT 60.270 47.619 10.70 0.00 0.00 3.34
4522 5086 1.798813 GAGGCTGTGTTCGTTCGAATT 59.201 47.619 10.70 0.00 0.00 2.17
4523 5087 2.218603 AGGCTGTGTTCGTTCGAATTT 58.781 42.857 10.70 0.00 0.00 1.82
4524 5088 2.616842 AGGCTGTGTTCGTTCGAATTTT 59.383 40.909 10.70 0.00 0.00 1.82
4525 5089 3.066203 AGGCTGTGTTCGTTCGAATTTTT 59.934 39.130 10.70 0.00 0.00 1.94
4526 5090 3.179599 GGCTGTGTTCGTTCGAATTTTTG 59.820 43.478 10.70 3.22 0.00 2.44
4527 5091 3.179599 GCTGTGTTCGTTCGAATTTTTGG 59.820 43.478 10.70 2.35 0.00 3.28
4528 5092 4.593157 CTGTGTTCGTTCGAATTTTTGGA 58.407 39.130 10.70 0.00 0.00 3.53
4529 5093 5.176407 TGTGTTCGTTCGAATTTTTGGAT 57.824 34.783 10.70 0.00 0.00 3.41
4530 5094 4.973051 TGTGTTCGTTCGAATTTTTGGATG 59.027 37.500 10.70 0.00 0.00 3.51
4531 5095 3.978217 TGTTCGTTCGAATTTTTGGATGC 59.022 39.130 10.70 0.00 0.00 3.91
4532 5096 2.845486 TCGTTCGAATTTTTGGATGCG 58.155 42.857 0.00 0.00 0.00 4.73
4533 5097 1.317319 CGTTCGAATTTTTGGATGCGC 59.683 47.619 0.00 0.00 0.00 6.09
4534 5098 1.653609 GTTCGAATTTTTGGATGCGCC 59.346 47.619 4.18 0.00 37.10 6.53
4535 5099 0.179176 TCGAATTTTTGGATGCGCCG 60.179 50.000 4.18 0.00 40.66 6.46
4536 5100 0.179176 CGAATTTTTGGATGCGCCGA 60.179 50.000 4.18 0.00 40.66 5.54
4537 5101 1.268265 GAATTTTTGGATGCGCCGAC 58.732 50.000 4.18 0.00 40.66 4.79
4538 5102 0.108851 AATTTTTGGATGCGCCGACC 60.109 50.000 4.18 6.28 40.66 4.79
4539 5103 2.265073 ATTTTTGGATGCGCCGACCG 62.265 55.000 4.18 0.00 40.66 4.79
4540 5104 4.690719 TTTGGATGCGCCGACCGT 62.691 61.111 4.18 0.00 40.66 4.83
4541 5105 2.783241 TTTTGGATGCGCCGACCGTA 62.783 55.000 4.18 0.00 40.66 4.02
4542 5106 3.993376 TTGGATGCGCCGACCGTAC 62.993 63.158 4.18 0.00 40.66 3.67
4548 5112 4.764336 CGCCGACCGTACGCTCAA 62.764 66.667 10.49 0.00 0.00 3.02
4549 5113 3.177249 GCCGACCGTACGCTCAAC 61.177 66.667 10.49 0.00 0.00 3.18
4550 5114 2.256158 CCGACCGTACGCTCAACA 59.744 61.111 10.49 0.00 0.00 3.33
4551 5115 1.372004 CCGACCGTACGCTCAACAA 60.372 57.895 10.49 0.00 0.00 2.83
4552 5116 1.342082 CCGACCGTACGCTCAACAAG 61.342 60.000 10.49 0.00 0.00 3.16
4553 5117 0.662374 CGACCGTACGCTCAACAAGT 60.662 55.000 10.49 0.00 0.00 3.16
4554 5118 1.400113 CGACCGTACGCTCAACAAGTA 60.400 52.381 10.49 0.00 0.00 2.24
4555 5119 2.248487 GACCGTACGCTCAACAAGTAG 58.752 52.381 10.49 0.00 0.00 2.57
4556 5120 0.989890 CCGTACGCTCAACAAGTAGC 59.010 55.000 10.49 0.00 35.33 3.58
4557 5121 0.989890 CGTACGCTCAACAAGTAGCC 59.010 55.000 0.52 0.00 35.22 3.93
4558 5122 0.989890 GTACGCTCAACAAGTAGCCG 59.010 55.000 0.00 0.00 35.22 5.52
4559 5123 0.734942 TACGCTCAACAAGTAGCCGC 60.735 55.000 0.00 0.00 35.22 6.53
4560 5124 2.027073 CGCTCAACAAGTAGCCGCA 61.027 57.895 0.00 0.00 35.22 5.69
4561 5125 1.361668 CGCTCAACAAGTAGCCGCAT 61.362 55.000 0.00 0.00 35.22 4.73
4562 5126 0.375106 GCTCAACAAGTAGCCGCATC 59.625 55.000 0.00 0.00 32.40 3.91
4563 5127 2.009042 GCTCAACAAGTAGCCGCATCT 61.009 52.381 0.00 0.00 32.40 2.90
4564 5128 2.350522 CTCAACAAGTAGCCGCATCTT 58.649 47.619 0.00 0.00 0.00 2.40
4565 5129 2.076100 TCAACAAGTAGCCGCATCTTG 58.924 47.619 19.14 19.14 42.60 3.02
4566 5130 3.935993 ACAAGTAGCCGCATCTTGT 57.064 47.368 20.10 20.10 44.24 3.16
4567 5131 2.185004 ACAAGTAGCCGCATCTTGTT 57.815 45.000 20.10 10.06 45.97 2.83
4568 5132 2.076863 ACAAGTAGCCGCATCTTGTTC 58.923 47.619 20.10 0.00 45.97 3.18
4569 5133 2.076100 CAAGTAGCCGCATCTTGTTCA 58.924 47.619 15.06 0.00 35.34 3.18
4570 5134 1.726853 AGTAGCCGCATCTTGTTCAC 58.273 50.000 0.00 0.00 0.00 3.18
4571 5135 0.727398 GTAGCCGCATCTTGTTCACC 59.273 55.000 0.00 0.00 0.00 4.02
4572 5136 0.739462 TAGCCGCATCTTGTTCACCG 60.739 55.000 0.00 0.00 0.00 4.94
4573 5137 3.039202 GCCGCATCTTGTTCACCGG 62.039 63.158 0.00 0.00 38.76 5.28
4574 5138 1.375396 CCGCATCTTGTTCACCGGA 60.375 57.895 9.46 0.00 38.04 5.14
4575 5139 1.361668 CCGCATCTTGTTCACCGGAG 61.362 60.000 9.46 0.00 38.04 4.63
4592 5156 5.684550 CCGGAGGCCATTTATACTAAAAC 57.315 43.478 5.01 0.00 46.14 2.43
4593 5157 5.127491 CCGGAGGCCATTTATACTAAAACA 58.873 41.667 5.01 0.00 46.14 2.83
4594 5158 5.591067 CCGGAGGCCATTTATACTAAAACAA 59.409 40.000 5.01 0.00 46.14 2.83
4595 5159 6.238648 CCGGAGGCCATTTATACTAAAACAAG 60.239 42.308 5.01 0.00 46.14 3.16
4596 5160 6.504398 GGAGGCCATTTATACTAAAACAAGC 58.496 40.000 5.01 0.00 0.00 4.01
4597 5161 6.096282 GGAGGCCATTTATACTAAAACAAGCA 59.904 38.462 5.01 0.00 0.00 3.91
4598 5162 7.201911 GGAGGCCATTTATACTAAAACAAGCAT 60.202 37.037 5.01 0.00 0.00 3.79
4599 5163 8.760980 AGGCCATTTATACTAAAACAAGCATA 57.239 30.769 5.01 0.00 0.00 3.14
4600 5164 8.850156 AGGCCATTTATACTAAAACAAGCATAG 58.150 33.333 5.01 0.00 0.00 2.23
4601 5165 7.595130 GGCCATTTATACTAAAACAAGCATAGC 59.405 37.037 0.00 0.00 0.00 2.97
4602 5166 8.134895 GCCATTTATACTAAAACAAGCATAGCA 58.865 33.333 0.00 0.00 0.00 3.49
4611 5175 8.792633 ACTAAAACAAGCATAGCAAATAGTTCA 58.207 29.630 0.00 0.00 0.00 3.18
4612 5176 9.624697 CTAAAACAAGCATAGCAAATAGTTCAA 57.375 29.630 0.00 0.00 0.00 2.69
4613 5177 8.885494 AAAACAAGCATAGCAAATAGTTCAAA 57.115 26.923 0.00 0.00 0.00 2.69
4614 5178 9.492973 AAAACAAGCATAGCAAATAGTTCAAAT 57.507 25.926 0.00 0.00 0.00 2.32
4615 5179 8.693542 AACAAGCATAGCAAATAGTTCAAATC 57.306 30.769 0.00 0.00 0.00 2.17
4616 5180 7.829725 ACAAGCATAGCAAATAGTTCAAATCA 58.170 30.769 0.00 0.00 0.00 2.57
4617 5181 8.306038 ACAAGCATAGCAAATAGTTCAAATCAA 58.694 29.630 0.00 0.00 0.00 2.57
4618 5182 9.142515 CAAGCATAGCAAATAGTTCAAATCAAA 57.857 29.630 0.00 0.00 0.00 2.69
4619 5183 8.693542 AGCATAGCAAATAGTTCAAATCAAAC 57.306 30.769 0.00 0.00 0.00 2.93
4620 5184 8.306038 AGCATAGCAAATAGTTCAAATCAAACA 58.694 29.630 0.00 0.00 0.00 2.83
4621 5185 9.090692 GCATAGCAAATAGTTCAAATCAAACAT 57.909 29.630 0.00 0.00 0.00 2.71
4624 5188 8.693542 AGCAAATAGTTCAAATCAAACATAGC 57.306 30.769 0.00 0.00 0.00 2.97
4625 5189 8.306038 AGCAAATAGTTCAAATCAAACATAGCA 58.694 29.630 0.00 0.00 0.00 3.49
4626 5190 8.924691 GCAAATAGTTCAAATCAAACATAGCAA 58.075 29.630 0.00 0.00 0.00 3.91
4637 5201 9.979578 AAATCAAACATAGCAAATAGTTTCACA 57.020 25.926 0.00 0.00 32.34 3.58
4639 5203 9.793252 ATCAAACATAGCAAATAGTTTCACATC 57.207 29.630 0.00 0.00 32.34 3.06
4640 5204 9.013229 TCAAACATAGCAAATAGTTTCACATCT 57.987 29.630 0.00 0.00 32.34 2.90
4641 5205 9.069078 CAAACATAGCAAATAGTTTCACATCTG 57.931 33.333 0.00 0.00 32.34 2.90
4642 5206 8.565896 AACATAGCAAATAGTTTCACATCTGA 57.434 30.769 0.00 0.00 0.00 3.27
4643 5207 8.565896 ACATAGCAAATAGTTTCACATCTGAA 57.434 30.769 0.00 0.00 34.39 3.02
4644 5208 9.013229 ACATAGCAAATAGTTTCACATCTGAAA 57.987 29.630 0.00 0.00 42.93 2.69
4648 5212 9.236006 AGCAAATAGTTTCACATCTGAAATAGT 57.764 29.630 0.00 0.00 45.93 2.12
4649 5213 9.495754 GCAAATAGTTTCACATCTGAAATAGTC 57.504 33.333 0.00 0.00 45.93 2.59
4650 5214 9.694520 CAAATAGTTTCACATCTGAAATAGTCG 57.305 33.333 0.00 0.00 45.93 4.18
4651 5215 9.436957 AAATAGTTTCACATCTGAAATAGTCGT 57.563 29.630 0.00 0.00 45.93 4.34
4653 5217 7.813852 AGTTTCACATCTGAAATAGTCGTAC 57.186 36.000 0.00 0.00 45.93 3.67
4654 5218 7.375834 AGTTTCACATCTGAAATAGTCGTACA 58.624 34.615 0.00 0.00 45.93 2.90
4655 5219 7.870954 AGTTTCACATCTGAAATAGTCGTACAA 59.129 33.333 0.00 0.00 45.93 2.41
4656 5220 8.656849 GTTTCACATCTGAAATAGTCGTACAAT 58.343 33.333 0.00 0.00 45.93 2.71
4657 5221 7.755582 TCACATCTGAAATAGTCGTACAATG 57.244 36.000 0.00 0.00 0.00 2.82
4658 5222 6.255670 TCACATCTGAAATAGTCGTACAATGC 59.744 38.462 0.00 0.00 0.00 3.56
4659 5223 6.035975 CACATCTGAAATAGTCGTACAATGCA 59.964 38.462 0.00 0.00 0.00 3.96
4660 5224 6.593770 ACATCTGAAATAGTCGTACAATGCAA 59.406 34.615 0.00 0.00 0.00 4.08
4661 5225 7.280876 ACATCTGAAATAGTCGTACAATGCAAT 59.719 33.333 0.00 0.00 0.00 3.56
4662 5226 7.609760 TCTGAAATAGTCGTACAATGCAATT 57.390 32.000 0.00 0.00 36.63 2.32
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 2.159448 TGGAAACTTTTGACGTGCAGTG 60.159 45.455 0.00 0.00 0.00 3.66
59 60 0.395586 ACTTGTGTGCTTCCTGCCAA 60.396 50.000 0.00 0.00 42.00 4.52
68 69 6.636705 TCCGAGTTATTATTACTTGTGTGCT 58.363 36.000 0.00 0.00 0.00 4.40
91 92 1.394917 GGTATCCAATCGCATCGCATC 59.605 52.381 0.00 0.00 0.00 3.91
95 96 0.319555 ACGGGTATCCAATCGCATCG 60.320 55.000 0.00 0.00 0.00 3.84
129 130 9.631452 CGAAGATATCTTGCAGAAATACTCATA 57.369 33.333 22.61 0.00 36.11 2.15
130 131 8.147058 ACGAAGATATCTTGCAGAAATACTCAT 58.853 33.333 22.61 0.00 36.11 2.90
131 132 7.492524 ACGAAGATATCTTGCAGAAATACTCA 58.507 34.615 22.61 0.00 36.11 3.41
132 133 7.938563 ACGAAGATATCTTGCAGAAATACTC 57.061 36.000 22.61 2.89 36.11 2.59
154 167 2.486951 ACGCAGGCAGTTACTATACG 57.513 50.000 0.00 0.00 0.00 3.06
155 168 2.284417 GCAACGCAGGCAGTTACTATAC 59.716 50.000 0.00 0.00 0.00 1.47
156 169 2.093921 TGCAACGCAGGCAGTTACTATA 60.094 45.455 0.00 0.00 36.11 1.31
157 170 1.338674 TGCAACGCAGGCAGTTACTAT 60.339 47.619 0.00 0.00 36.11 2.12
158 171 0.034198 TGCAACGCAGGCAGTTACTA 59.966 50.000 0.00 0.00 36.11 1.82
159 172 0.606401 ATGCAACGCAGGCAGTTACT 60.606 50.000 0.00 0.00 45.68 2.24
160 173 0.240945 AATGCAACGCAGGCAGTTAC 59.759 50.000 0.00 0.00 45.68 2.50
161 174 0.240678 CAATGCAACGCAGGCAGTTA 59.759 50.000 0.00 0.00 45.68 2.24
162 175 1.007038 CAATGCAACGCAGGCAGTT 60.007 52.632 0.00 0.00 45.68 3.16
163 176 2.646719 CAATGCAACGCAGGCAGT 59.353 55.556 0.00 0.00 45.68 4.40
164 177 1.925415 TAGCAATGCAACGCAGGCAG 61.925 55.000 8.35 0.00 45.68 4.85
165 178 1.970640 TAGCAATGCAACGCAGGCA 60.971 52.632 8.35 0.00 43.65 4.75
166 179 1.514873 GTAGCAATGCAACGCAGGC 60.515 57.895 8.35 7.16 43.65 4.85
167 180 1.328680 CTAGTAGCAATGCAACGCAGG 59.671 52.381 8.35 0.00 43.65 4.85
168 181 2.270923 TCTAGTAGCAATGCAACGCAG 58.729 47.619 8.35 0.00 43.65 5.18
169 182 2.378445 TCTAGTAGCAATGCAACGCA 57.622 45.000 8.35 0.00 44.86 5.24
170 183 3.740044 TTTCTAGTAGCAATGCAACGC 57.260 42.857 8.35 2.60 0.00 4.84
171 184 6.032775 CACAATTTTCTAGTAGCAATGCAACG 59.967 38.462 8.35 0.00 0.00 4.10
172 185 6.183360 GCACAATTTTCTAGTAGCAATGCAAC 60.183 38.462 8.35 0.00 0.00 4.17
173 186 5.863397 GCACAATTTTCTAGTAGCAATGCAA 59.137 36.000 8.35 0.00 0.00 4.08
174 187 5.401550 GCACAATTTTCTAGTAGCAATGCA 58.598 37.500 8.35 0.00 0.00 3.96
175 188 4.496895 CGCACAATTTTCTAGTAGCAATGC 59.503 41.667 0.00 0.00 0.00 3.56
176 189 5.509272 CACGCACAATTTTCTAGTAGCAATG 59.491 40.000 0.00 0.00 0.00 2.82
177 190 5.391950 CCACGCACAATTTTCTAGTAGCAAT 60.392 40.000 0.00 0.00 0.00 3.56
178 191 4.083537 CCACGCACAATTTTCTAGTAGCAA 60.084 41.667 0.00 0.00 0.00 3.91
179 192 3.435327 CCACGCACAATTTTCTAGTAGCA 59.565 43.478 0.00 0.00 0.00 3.49
180 193 3.435671 ACCACGCACAATTTTCTAGTAGC 59.564 43.478 0.00 0.00 0.00 3.58
181 194 5.382303 CAACCACGCACAATTTTCTAGTAG 58.618 41.667 0.00 0.00 0.00 2.57
182 195 4.214545 CCAACCACGCACAATTTTCTAGTA 59.785 41.667 0.00 0.00 0.00 1.82
183 196 3.004315 CCAACCACGCACAATTTTCTAGT 59.996 43.478 0.00 0.00 0.00 2.57
184 197 3.252215 TCCAACCACGCACAATTTTCTAG 59.748 43.478 0.00 0.00 0.00 2.43
185 198 3.215151 TCCAACCACGCACAATTTTCTA 58.785 40.909 0.00 0.00 0.00 2.10
186 199 2.028130 TCCAACCACGCACAATTTTCT 58.972 42.857 0.00 0.00 0.00 2.52
187 200 2.223711 ACTCCAACCACGCACAATTTTC 60.224 45.455 0.00 0.00 0.00 2.29
188 201 1.754226 ACTCCAACCACGCACAATTTT 59.246 42.857 0.00 0.00 0.00 1.82
189 202 1.336755 GACTCCAACCACGCACAATTT 59.663 47.619 0.00 0.00 0.00 1.82
190 203 0.951558 GACTCCAACCACGCACAATT 59.048 50.000 0.00 0.00 0.00 2.32
191 204 0.179032 TGACTCCAACCACGCACAAT 60.179 50.000 0.00 0.00 0.00 2.71
192 205 0.813610 CTGACTCCAACCACGCACAA 60.814 55.000 0.00 0.00 0.00 3.33
193 206 1.227527 CTGACTCCAACCACGCACA 60.228 57.895 0.00 0.00 0.00 4.57
194 207 0.320771 ATCTGACTCCAACCACGCAC 60.321 55.000 0.00 0.00 0.00 5.34
195 208 0.396435 AATCTGACTCCAACCACGCA 59.604 50.000 0.00 0.00 0.00 5.24
196 209 1.464997 GAAATCTGACTCCAACCACGC 59.535 52.381 0.00 0.00 0.00 5.34
197 210 2.738846 CAGAAATCTGACTCCAACCACG 59.261 50.000 4.37 0.00 46.59 4.94
198 211 2.485814 GCAGAAATCTGACTCCAACCAC 59.514 50.000 14.43 0.00 46.59 4.16
199 212 2.783135 GCAGAAATCTGACTCCAACCA 58.217 47.619 14.43 0.00 46.59 3.67
208 221 1.704628 TGGACCAAGGCAGAAATCTGA 59.295 47.619 14.43 0.00 46.59 3.27
209 222 2.205022 TGGACCAAGGCAGAAATCTG 57.795 50.000 6.05 6.05 46.40 2.90
210 223 2.731572 CATGGACCAAGGCAGAAATCT 58.268 47.619 0.00 0.00 0.00 2.40
211 224 1.135721 GCATGGACCAAGGCAGAAATC 59.864 52.381 14.71 0.00 0.00 2.17
212 225 1.188863 GCATGGACCAAGGCAGAAAT 58.811 50.000 14.71 0.00 0.00 2.17
213 226 0.178967 TGCATGGACCAAGGCAGAAA 60.179 50.000 17.52 0.00 0.00 2.52
214 227 0.040058 ATGCATGGACCAAGGCAGAA 59.960 50.000 23.42 6.45 39.95 3.02
215 228 0.040058 AATGCATGGACCAAGGCAGA 59.960 50.000 23.42 7.05 39.95 4.26
216 229 0.899720 AAATGCATGGACCAAGGCAG 59.100 50.000 23.42 4.19 39.95 4.85
217 230 1.002201 CAAAATGCATGGACCAAGGCA 59.998 47.619 22.02 22.02 41.00 4.75
218 231 1.676615 CCAAAATGCATGGACCAAGGC 60.677 52.381 13.16 13.16 40.56 4.35
219 232 1.624813 ACCAAAATGCATGGACCAAGG 59.375 47.619 11.80 4.71 40.56 3.61
220 233 2.564062 AGACCAAAATGCATGGACCAAG 59.436 45.455 11.80 0.00 40.56 3.61
221 234 2.607499 AGACCAAAATGCATGGACCAA 58.393 42.857 11.80 0.00 40.56 3.67
222 235 2.307496 AGACCAAAATGCATGGACCA 57.693 45.000 11.80 0.00 40.56 4.02
223 236 2.689983 CCTAGACCAAAATGCATGGACC 59.310 50.000 11.80 3.38 40.56 4.46
224 237 2.689983 CCCTAGACCAAAATGCATGGAC 59.310 50.000 11.80 5.55 40.56 4.02
225 238 2.580322 TCCCTAGACCAAAATGCATGGA 59.420 45.455 11.80 1.50 40.56 3.41
226 239 2.689983 GTCCCTAGACCAAAATGCATGG 59.310 50.000 0.00 0.46 43.84 3.66
238 251 4.588106 GTCTGGGTTTATAGGTCCCTAGAC 59.412 50.000 5.47 5.47 41.58 2.59
239 252 4.690818 CGTCTGGGTTTATAGGTCCCTAGA 60.691 50.000 0.00 0.00 41.58 2.43
240 253 3.573110 CGTCTGGGTTTATAGGTCCCTAG 59.427 52.174 0.00 0.00 41.58 3.02
241 254 3.569491 CGTCTGGGTTTATAGGTCCCTA 58.431 50.000 0.00 0.00 41.58 3.53
242 255 2.395619 CGTCTGGGTTTATAGGTCCCT 58.604 52.381 0.00 0.00 41.58 4.20
243 256 1.415289 CCGTCTGGGTTTATAGGTCCC 59.585 57.143 0.00 0.00 41.41 4.46
244 257 2.364647 CTCCGTCTGGGTTTATAGGTCC 59.635 54.545 0.00 0.00 37.00 4.46
245 258 2.364647 CCTCCGTCTGGGTTTATAGGTC 59.635 54.545 0.00 0.00 37.00 3.85
246 259 2.292719 ACCTCCGTCTGGGTTTATAGGT 60.293 50.000 0.00 0.00 34.12 3.08
247 260 2.395619 ACCTCCGTCTGGGTTTATAGG 58.604 52.381 0.00 0.00 37.00 2.57
248 261 4.213513 ACTACCTCCGTCTGGGTTTATAG 58.786 47.826 0.00 0.00 37.07 1.31
249 262 4.255510 ACTACCTCCGTCTGGGTTTATA 57.744 45.455 0.00 0.00 37.07 0.98
250 263 3.111741 ACTACCTCCGTCTGGGTTTAT 57.888 47.619 0.00 0.00 37.07 1.40
251 264 2.610438 ACTACCTCCGTCTGGGTTTA 57.390 50.000 0.00 0.00 37.07 2.01
252 265 2.610438 TACTACCTCCGTCTGGGTTT 57.390 50.000 0.00 0.00 37.07 3.27
253 266 2.842645 ATACTACCTCCGTCTGGGTT 57.157 50.000 0.00 0.00 37.07 4.11
254 267 2.764572 CAAATACTACCTCCGTCTGGGT 59.235 50.000 0.00 0.00 39.40 4.51
255 268 2.764572 ACAAATACTACCTCCGTCTGGG 59.235 50.000 0.00 0.00 35.24 4.45
256 269 3.700038 AGACAAATACTACCTCCGTCTGG 59.300 47.826 0.00 0.00 31.36 3.86
257 270 4.985538 AGACAAATACTACCTCCGTCTG 57.014 45.455 0.00 0.00 31.36 3.51
258 271 6.363065 TCATAGACAAATACTACCTCCGTCT 58.637 40.000 0.00 0.00 36.33 4.18
259 272 6.294065 CCTCATAGACAAATACTACCTCCGTC 60.294 46.154 0.00 0.00 0.00 4.79
260 273 5.535406 CCTCATAGACAAATACTACCTCCGT 59.465 44.000 0.00 0.00 0.00 4.69
261 274 5.768662 TCCTCATAGACAAATACTACCTCCG 59.231 44.000 0.00 0.00 0.00 4.63
262 275 7.598759 TTCCTCATAGACAAATACTACCTCC 57.401 40.000 0.00 0.00 0.00 4.30
304 328 5.399892 CGTTATATTTTGCCACAAAACGTGT 59.600 36.000 7.58 0.00 44.78 4.49
308 332 8.803799 CCTAATCGTTATATTTTGCCACAAAAC 58.196 33.333 7.58 0.00 0.00 2.43
314 338 9.226606 CCTAATCCTAATCGTTATATTTTGCCA 57.773 33.333 0.00 0.00 0.00 4.92
324 348 7.016268 AGCATTTCCTCCTAATCCTAATCGTTA 59.984 37.037 0.00 0.00 0.00 3.18
329 353 5.163055 TGCAGCATTTCCTCCTAATCCTAAT 60.163 40.000 0.00 0.00 0.00 1.73
337 361 2.837591 TGTAGTGCAGCATTTCCTCCTA 59.162 45.455 0.00 0.00 0.00 2.94
357 381 4.876107 AGTTAACCCAGAATATTCGTGCTG 59.124 41.667 9.78 2.97 0.00 4.41
379 403 4.582240 TCTGGACATGCTGAGTAGATACAG 59.418 45.833 0.00 0.00 37.22 2.74
392 416 0.179078 CTCTGCTCCTCTGGACATGC 60.179 60.000 0.00 0.00 0.00 4.06
401 425 0.246635 TTTACACGGCTCTGCTCCTC 59.753 55.000 0.00 0.00 0.00 3.71
403 427 1.739067 AATTTACACGGCTCTGCTCC 58.261 50.000 0.00 0.00 0.00 4.70
407 431 6.607689 TGTTCAATAAATTTACACGGCTCTG 58.392 36.000 0.00 0.00 0.00 3.35
417 441 7.479291 GCGTACGCTTTCTGTTCAATAAATTTA 59.521 33.333 31.95 0.00 38.26 1.40
420 462 5.321516 GCGTACGCTTTCTGTTCAATAAAT 58.678 37.500 31.95 0.00 38.26 1.40
431 473 0.388907 TAAAGCCGCGTACGCTTTCT 60.389 50.000 34.69 24.71 41.42 2.52
441 483 5.396362 CAGTATCATTCATTTTAAAGCCGCG 59.604 40.000 0.00 0.00 0.00 6.46
442 484 6.265577 ACAGTATCATTCATTTTAAAGCCGC 58.734 36.000 0.00 0.00 0.00 6.53
537 579 6.384015 ACCCAACCATTTTCTTCTTCTTTTCT 59.616 34.615 0.00 0.00 0.00 2.52
538 580 6.582636 ACCCAACCATTTTCTTCTTCTTTTC 58.417 36.000 0.00 0.00 0.00 2.29
539 581 6.560003 ACCCAACCATTTTCTTCTTCTTTT 57.440 33.333 0.00 0.00 0.00 2.27
540 582 6.609616 TGTACCCAACCATTTTCTTCTTCTTT 59.390 34.615 0.00 0.00 0.00 2.52
541 583 6.133356 TGTACCCAACCATTTTCTTCTTCTT 58.867 36.000 0.00 0.00 0.00 2.52
542 584 5.701224 TGTACCCAACCATTTTCTTCTTCT 58.299 37.500 0.00 0.00 0.00 2.85
543 585 5.768164 TCTGTACCCAACCATTTTCTTCTTC 59.232 40.000 0.00 0.00 0.00 2.87
544 586 5.701224 TCTGTACCCAACCATTTTCTTCTT 58.299 37.500 0.00 0.00 0.00 2.52
545 587 5.316987 CTCTGTACCCAACCATTTTCTTCT 58.683 41.667 0.00 0.00 0.00 2.85
546 588 4.082733 GCTCTGTACCCAACCATTTTCTTC 60.083 45.833 0.00 0.00 0.00 2.87
547 589 3.826729 GCTCTGTACCCAACCATTTTCTT 59.173 43.478 0.00 0.00 0.00 2.52
578 620 1.990060 GCTGCCCCACTACTCCTCA 60.990 63.158 0.00 0.00 0.00 3.86
588 630 0.698238 AGAATAGTGTTGCTGCCCCA 59.302 50.000 0.00 0.00 0.00 4.96
598 640 2.729194 AGCGTGGAGAGAGAATAGTGT 58.271 47.619 0.00 0.00 0.00 3.55
630 677 1.379309 GGGTGTGGTGTGGTGTTGT 60.379 57.895 0.00 0.00 0.00 3.32
631 678 0.181587 TAGGGTGTGGTGTGGTGTTG 59.818 55.000 0.00 0.00 0.00 3.33
632 679 0.181824 GTAGGGTGTGGTGTGGTGTT 59.818 55.000 0.00 0.00 0.00 3.32
633 680 1.834301 GTAGGGTGTGGTGTGGTGT 59.166 57.895 0.00 0.00 0.00 4.16
634 681 1.301401 CGTAGGGTGTGGTGTGGTG 60.301 63.158 0.00 0.00 0.00 4.17
682 729 1.004044 CTCACTCAAATCACAGGCCCT 59.996 52.381 0.00 0.00 0.00 5.19
715 762 1.322442 GCCAAGATGCCTATCCAACC 58.678 55.000 0.00 0.00 33.64 3.77
751 798 1.561542 GGAGAAAGCTTGGATCCCTCA 59.438 52.381 9.90 0.00 0.00 3.86
866 921 0.621280 AAAATGGGGATGGGCAAGGG 60.621 55.000 0.00 0.00 0.00 3.95
867 922 0.832626 GAAAATGGGGATGGGCAAGG 59.167 55.000 0.00 0.00 0.00 3.61
868 923 1.758862 GAGAAAATGGGGATGGGCAAG 59.241 52.381 0.00 0.00 0.00 4.01
935 997 5.308497 TCCCAAATCTAACACCTTGTGACTA 59.692 40.000 0.49 0.00 36.96 2.59
1025 1092 0.459489 CCGGAAGAGAAGAGAGGCAG 59.541 60.000 0.00 0.00 0.00 4.85
1026 1093 0.251832 ACCGGAAGAGAAGAGAGGCA 60.252 55.000 9.46 0.00 0.00 4.75
1027 1094 0.458260 GACCGGAAGAGAAGAGAGGC 59.542 60.000 9.46 0.00 0.00 4.70
1028 1095 1.107945 GGACCGGAAGAGAAGAGAGG 58.892 60.000 9.46 0.00 0.00 3.69
1061 1130 1.668294 CTCGGATCGATCCCCCAAG 59.332 63.158 33.51 22.41 44.24 3.61
1063 1132 2.917751 GCTCGGATCGATCCCCCA 60.918 66.667 33.51 19.15 44.24 4.96
1105 1177 1.138036 CCATTGCCTCACACGCATG 59.862 57.895 0.00 0.00 35.83 4.06
1143 1215 0.541998 TCCTCTTCTTCTCCGGTGCA 60.542 55.000 0.00 0.00 0.00 4.57
1146 1218 1.896465 CACTTCCTCTTCTTCTCCGGT 59.104 52.381 0.00 0.00 0.00 5.28
1207 1279 2.281970 CTGTGAGCAGGCAAGGCA 60.282 61.111 0.00 0.00 39.01 4.75
1249 1321 7.289084 ACCAAACCAAAGTAAATAATGTGGAGT 59.711 33.333 4.19 0.00 0.00 3.85
1259 1331 4.471747 ACACCCAACCAAACCAAAGTAAAT 59.528 37.500 0.00 0.00 0.00 1.40
1263 1335 1.945580 ACACCCAACCAAACCAAAGT 58.054 45.000 0.00 0.00 0.00 2.66
1269 1341 2.481276 GCTGAAGAACACCCAACCAAAC 60.481 50.000 0.00 0.00 0.00 2.93
1316 1388 1.953559 ACAGTTGTTGCACAGACGAT 58.046 45.000 0.00 0.00 0.00 3.73
1319 1391 1.919918 GCAAACAGTTGTTGCACAGAC 59.080 47.619 5.25 0.00 38.44 3.51
1457 1531 3.176708 CCATGCTCGAAAGAAGCAAATG 58.823 45.455 1.50 0.00 43.63 2.32
1459 1533 1.068333 GCCATGCTCGAAAGAAGCAAA 60.068 47.619 1.50 0.00 43.63 3.68
1462 1536 1.061570 CGCCATGCTCGAAAGAAGC 59.938 57.895 0.01 0.00 41.32 3.86
1564 1647 5.116180 GGGGGACAAAACAAGAAAGAAAAG 58.884 41.667 0.00 0.00 0.00 2.27
1595 1679 2.749076 TCGAGACAGCAAAAATGGATGG 59.251 45.455 0.00 0.00 0.00 3.51
1599 1683 3.922240 CCAATTCGAGACAGCAAAAATGG 59.078 43.478 0.00 0.00 0.00 3.16
1606 1690 0.684535 TGGACCAATTCGAGACAGCA 59.315 50.000 0.00 0.00 0.00 4.41
1628 1712 6.489700 TGGATTCTTGCACAAACAGAGAAATA 59.510 34.615 0.00 0.00 30.96 1.40
1629 1713 5.302568 TGGATTCTTGCACAAACAGAGAAAT 59.697 36.000 0.00 0.00 30.96 2.17
1687 1771 1.988467 CGATCACCTGCGCATACATAG 59.012 52.381 12.24 0.00 0.00 2.23
1940 2024 2.520741 GAGGAGGAGGAGGAGGCG 60.521 72.222 0.00 0.00 0.00 5.52
2075 2159 0.458543 GCTCGGAGACATCGAAGCAA 60.459 55.000 9.69 0.00 36.15 3.91
2157 2241 3.259633 AAGCTTCGCCCAGGACCAG 62.260 63.158 0.00 0.00 0.00 4.00
2168 2252 0.239347 CCAGGTGAAAGCAAGCTTCG 59.761 55.000 7.88 0.00 36.26 3.79
3574 3676 0.599991 ACAAGACAAGATGCGTCGCA 60.600 50.000 24.05 24.05 44.86 5.10
3632 3740 3.058016 ACAACTCGCATTCAACAAGATGG 60.058 43.478 0.00 0.00 0.00 3.51
3656 3764 7.012044 GGAAAGAGAACTTTTACTGCACTGTAA 59.988 37.037 0.00 0.00 44.97 2.41
3657 3765 6.482308 GGAAAGAGAACTTTTACTGCACTGTA 59.518 38.462 0.00 0.00 44.97 2.74
3671 3806 6.214399 CAAACGTAGTACAGGAAAGAGAACT 58.786 40.000 0.38 0.00 45.00 3.01
3672 3807 5.404667 CCAAACGTAGTACAGGAAAGAGAAC 59.595 44.000 0.38 0.00 45.00 3.01
3698 3833 5.576447 ATTTAGCACAAAATACGAAGGGG 57.424 39.130 0.00 0.00 0.00 4.79
3699 3834 7.883229 AAAATTTAGCACAAAATACGAAGGG 57.117 32.000 0.00 0.00 0.00 3.95
3774 3909 9.926158 AACTATGTTCAAATACAAATGCAATGA 57.074 25.926 9.59 0.00 0.00 2.57
3777 3912 9.979578 AGAAACTATGTTCAAATACAAATGCAA 57.020 25.926 0.00 0.00 0.00 4.08
3778 3913 9.409312 CAGAAACTATGTTCAAATACAAATGCA 57.591 29.630 0.00 0.00 0.00 3.96
3779 3914 9.624697 TCAGAAACTATGTTCAAATACAAATGC 57.375 29.630 0.00 0.00 0.00 3.56
3867 4002 9.929180 CCTGATTTATTAGTCCTTCGATATTCA 57.071 33.333 0.00 0.00 0.00 2.57
3869 4004 9.930693 GTCCTGATTTATTAGTCCTTCGATATT 57.069 33.333 0.00 0.00 0.00 1.28
3870 4005 8.532819 GGTCCTGATTTATTAGTCCTTCGATAT 58.467 37.037 0.00 0.00 0.00 1.63
3871 4006 7.309012 CGGTCCTGATTTATTAGTCCTTCGATA 60.309 40.741 0.00 0.00 0.00 2.92
3872 4007 6.516860 CGGTCCTGATTTATTAGTCCTTCGAT 60.517 42.308 0.00 0.00 0.00 3.59
3873 4008 5.221185 CGGTCCTGATTTATTAGTCCTTCGA 60.221 44.000 0.00 0.00 0.00 3.71
3874 4009 4.982916 CGGTCCTGATTTATTAGTCCTTCG 59.017 45.833 0.00 0.00 0.00 3.79
3875 4010 6.158023 TCGGTCCTGATTTATTAGTCCTTC 57.842 41.667 0.00 0.00 0.00 3.46
3876 4011 5.070580 CCTCGGTCCTGATTTATTAGTCCTT 59.929 44.000 0.00 0.00 0.00 3.36
3877 4012 4.589374 CCTCGGTCCTGATTTATTAGTCCT 59.411 45.833 0.00 0.00 0.00 3.85
3878 4013 4.344390 ACCTCGGTCCTGATTTATTAGTCC 59.656 45.833 0.00 0.00 0.00 3.85
3879 4014 5.532664 ACCTCGGTCCTGATTTATTAGTC 57.467 43.478 0.00 0.00 0.00 2.59
3880 4015 6.134754 ACTACCTCGGTCCTGATTTATTAGT 58.865 40.000 0.00 0.00 0.00 2.24
3881 4016 6.651975 ACTACCTCGGTCCTGATTTATTAG 57.348 41.667 0.00 0.00 0.00 1.73
3882 4017 7.293073 ACTACTACCTCGGTCCTGATTTATTA 58.707 38.462 0.00 0.00 0.00 0.98
3883 4018 6.134754 ACTACTACCTCGGTCCTGATTTATT 58.865 40.000 0.00 0.00 0.00 1.40
3884 4019 5.703310 ACTACTACCTCGGTCCTGATTTAT 58.297 41.667 0.00 0.00 0.00 1.40
3885 4020 5.121380 ACTACTACCTCGGTCCTGATTTA 57.879 43.478 0.00 0.00 0.00 1.40
3886 4021 3.978610 ACTACTACCTCGGTCCTGATTT 58.021 45.455 0.00 0.00 0.00 2.17
3887 4022 3.666345 ACTACTACCTCGGTCCTGATT 57.334 47.619 0.00 0.00 0.00 2.57
3888 4023 3.972638 TCTACTACTACCTCGGTCCTGAT 59.027 47.826 0.00 0.00 0.00 2.90
3889 4024 3.378512 TCTACTACTACCTCGGTCCTGA 58.621 50.000 0.00 0.00 0.00 3.86
3890 4025 3.134442 ACTCTACTACTACCTCGGTCCTG 59.866 52.174 0.00 0.00 0.00 3.86
3891 4026 3.383223 ACTCTACTACTACCTCGGTCCT 58.617 50.000 0.00 0.00 0.00 3.85
3892 4027 3.836365 ACTCTACTACTACCTCGGTCC 57.164 52.381 0.00 0.00 0.00 4.46
3893 4028 5.301805 AGAGTACTCTACTACTACCTCGGTC 59.698 48.000 24.04 0.00 39.59 4.79
3894 4029 5.068987 CAGAGTACTCTACTACTACCTCGGT 59.931 48.000 24.75 0.00 39.59 4.69
3895 4030 5.531634 CAGAGTACTCTACTACTACCTCGG 58.468 50.000 24.75 4.47 39.59 4.63
3896 4031 4.984161 GCAGAGTACTCTACTACTACCTCG 59.016 50.000 24.75 9.27 39.59 4.63
3897 4032 6.165700 AGCAGAGTACTCTACTACTACCTC 57.834 45.833 24.75 4.87 39.59 3.85
3898 4033 6.350906 CAAGCAGAGTACTCTACTACTACCT 58.649 44.000 24.75 6.03 39.59 3.08
3899 4034 5.528320 CCAAGCAGAGTACTCTACTACTACC 59.472 48.000 24.75 6.50 39.59 3.18
3900 4035 6.347696 TCCAAGCAGAGTACTCTACTACTAC 58.652 44.000 24.75 8.73 39.59 2.73
3901 4036 6.408320 CCTCCAAGCAGAGTACTCTACTACTA 60.408 46.154 24.75 11.80 39.59 1.82
3902 4037 5.433526 CTCCAAGCAGAGTACTCTACTACT 58.566 45.833 24.75 16.09 39.59 2.57
3903 4038 4.577283 CCTCCAAGCAGAGTACTCTACTAC 59.423 50.000 24.75 14.23 39.59 2.73
3904 4039 4.385421 CCCTCCAAGCAGAGTACTCTACTA 60.385 50.000 24.75 9.20 39.59 1.82
3905 4040 3.626222 CCCTCCAAGCAGAGTACTCTACT 60.626 52.174 24.75 21.41 42.86 2.57
3921 4056 3.668141 AAATGTGCATCATACCCTCCA 57.332 42.857 0.00 0.00 35.48 3.86
3952 4087 5.163754 CCGGAATCATGAGGTCAAAAAGTAC 60.164 44.000 0.00 0.00 0.00 2.73
4008 4523 6.814506 ACTCGTCCTATACATACATACACC 57.185 41.667 0.00 0.00 0.00 4.16
4234 4780 4.404654 CGGGAGCCTGCGCAAAAC 62.405 66.667 13.05 3.34 37.52 2.43
4235 4781 4.947147 ACGGGAGCCTGCGCAAAA 62.947 61.111 13.05 0.00 37.52 2.44
4312 4858 4.886496 ACTCCCAAGGTACAGTTTACTC 57.114 45.455 0.00 0.00 0.00 2.59
4327 4873 2.565834 GCTCCAAAGTACAGTACTCCCA 59.434 50.000 13.86 0.00 38.26 4.37
4328 4874 2.093606 GGCTCCAAAGTACAGTACTCCC 60.094 54.545 13.86 4.66 38.26 4.30
4329 4875 2.416972 CGGCTCCAAAGTACAGTACTCC 60.417 54.545 13.86 8.50 38.26 3.85
4330 4876 2.416972 CCGGCTCCAAAGTACAGTACTC 60.417 54.545 13.86 0.28 38.26 2.59
4331 4877 1.549170 CCGGCTCCAAAGTACAGTACT 59.451 52.381 7.48 7.48 41.73 2.73
4332 4878 1.274447 ACCGGCTCCAAAGTACAGTAC 59.726 52.381 0.00 2.05 0.00 2.73
4337 4899 1.547372 TCTGTACCGGCTCCAAAGTAC 59.453 52.381 0.00 0.00 36.47 2.73
4345 4907 1.134340 TCTCTCTCTCTGTACCGGCTC 60.134 57.143 0.00 0.00 0.00 4.70
4464 5028 1.816074 AAGAAATACGGCCAAAGCGA 58.184 45.000 2.24 0.00 41.24 4.93
4470 5034 3.194542 CCCAAATGAAAGAAATACGGCCA 59.805 43.478 2.24 0.00 0.00 5.36
4471 5035 3.194755 ACCCAAATGAAAGAAATACGGCC 59.805 43.478 0.00 0.00 0.00 6.13
4472 5036 4.173256 CACCCAAATGAAAGAAATACGGC 58.827 43.478 0.00 0.00 0.00 5.68
4473 5037 5.160641 CACACCCAAATGAAAGAAATACGG 58.839 41.667 0.00 0.00 0.00 4.02
4474 5038 5.160641 CCACACCCAAATGAAAGAAATACG 58.839 41.667 0.00 0.00 0.00 3.06
4475 5039 4.929211 GCCACACCCAAATGAAAGAAATAC 59.071 41.667 0.00 0.00 0.00 1.89
4476 5040 4.590647 TGCCACACCCAAATGAAAGAAATA 59.409 37.500 0.00 0.00 0.00 1.40
4477 5041 3.390639 TGCCACACCCAAATGAAAGAAAT 59.609 39.130 0.00 0.00 0.00 2.17
4478 5042 2.768527 TGCCACACCCAAATGAAAGAAA 59.231 40.909 0.00 0.00 0.00 2.52
4479 5043 2.392662 TGCCACACCCAAATGAAAGAA 58.607 42.857 0.00 0.00 0.00 2.52
4480 5044 2.079170 TGCCACACCCAAATGAAAGA 57.921 45.000 0.00 0.00 0.00 2.52
4481 5045 2.906691 TTGCCACACCCAAATGAAAG 57.093 45.000 0.00 0.00 0.00 2.62
4482 5046 2.702478 TCATTGCCACACCCAAATGAAA 59.298 40.909 0.00 0.00 0.00 2.69
4483 5047 2.299582 CTCATTGCCACACCCAAATGAA 59.700 45.455 0.00 0.00 0.00 2.57
4484 5048 1.894466 CTCATTGCCACACCCAAATGA 59.106 47.619 0.00 0.00 0.00 2.57
4485 5049 1.066716 CCTCATTGCCACACCCAAATG 60.067 52.381 0.00 0.00 0.00 2.32
4486 5050 1.269012 CCTCATTGCCACACCCAAAT 58.731 50.000 0.00 0.00 0.00 2.32
4487 5051 1.470996 GCCTCATTGCCACACCCAAA 61.471 55.000 0.00 0.00 0.00 3.28
4488 5052 1.907807 GCCTCATTGCCACACCCAA 60.908 57.895 0.00 0.00 0.00 4.12
4489 5053 2.283101 GCCTCATTGCCACACCCA 60.283 61.111 0.00 0.00 0.00 4.51
4490 5054 2.036256 AGCCTCATTGCCACACCC 59.964 61.111 0.00 0.00 0.00 4.61
4491 5055 1.604593 ACAGCCTCATTGCCACACC 60.605 57.895 0.00 0.00 0.00 4.16
4492 5056 1.174712 ACACAGCCTCATTGCCACAC 61.175 55.000 0.00 0.00 0.00 3.82
4493 5057 0.467844 AACACAGCCTCATTGCCACA 60.468 50.000 0.00 0.00 0.00 4.17
4494 5058 0.242017 GAACACAGCCTCATTGCCAC 59.758 55.000 0.00 0.00 0.00 5.01
4495 5059 1.236616 CGAACACAGCCTCATTGCCA 61.237 55.000 0.00 0.00 0.00 4.92
4496 5060 1.237285 ACGAACACAGCCTCATTGCC 61.237 55.000 0.00 0.00 0.00 4.52
4497 5061 0.593128 AACGAACACAGCCTCATTGC 59.407 50.000 0.00 0.00 0.00 3.56
4498 5062 1.136252 CGAACGAACACAGCCTCATTG 60.136 52.381 0.00 0.00 0.00 2.82
4499 5063 1.148310 CGAACGAACACAGCCTCATT 58.852 50.000 0.00 0.00 0.00 2.57
4500 5064 0.317160 TCGAACGAACACAGCCTCAT 59.683 50.000 0.00 0.00 0.00 2.90
4501 5065 0.103390 TTCGAACGAACACAGCCTCA 59.897 50.000 5.53 0.00 0.00 3.86
4502 5066 1.429463 ATTCGAACGAACACAGCCTC 58.571 50.000 11.71 0.00 36.91 4.70
4503 5067 1.878953 AATTCGAACGAACACAGCCT 58.121 45.000 11.71 0.00 36.91 4.58
4504 5068 2.681152 AAATTCGAACGAACACAGCC 57.319 45.000 11.71 0.00 36.91 4.85
4505 5069 3.179599 CCAAAAATTCGAACGAACACAGC 59.820 43.478 11.71 0.00 36.91 4.40
4506 5070 4.593157 TCCAAAAATTCGAACGAACACAG 58.407 39.130 11.71 2.44 36.91 3.66
4507 5071 4.617808 TCCAAAAATTCGAACGAACACA 57.382 36.364 11.71 0.00 36.91 3.72
4508 5072 4.143618 GCATCCAAAAATTCGAACGAACAC 60.144 41.667 11.71 0.00 36.91 3.32
4509 5073 3.978217 GCATCCAAAAATTCGAACGAACA 59.022 39.130 11.71 0.00 36.91 3.18
4510 5074 3.057609 CGCATCCAAAAATTCGAACGAAC 59.942 43.478 11.71 0.00 36.91 3.95
4511 5075 3.230355 CGCATCCAAAAATTCGAACGAA 58.770 40.909 11.85 11.85 38.59 3.85
4512 5076 2.845486 CGCATCCAAAAATTCGAACGA 58.155 42.857 0.00 0.00 0.00 3.85
4513 5077 1.317319 GCGCATCCAAAAATTCGAACG 59.683 47.619 0.30 0.00 0.00 3.95
4514 5078 1.653609 GGCGCATCCAAAAATTCGAAC 59.346 47.619 10.83 0.00 34.01 3.95
4515 5079 1.730772 CGGCGCATCCAAAAATTCGAA 60.731 47.619 10.83 0.00 34.01 3.71
4516 5080 0.179176 CGGCGCATCCAAAAATTCGA 60.179 50.000 10.83 0.00 34.01 3.71
4517 5081 0.179176 TCGGCGCATCCAAAAATTCG 60.179 50.000 10.83 0.00 34.01 3.34
4518 5082 1.268265 GTCGGCGCATCCAAAAATTC 58.732 50.000 10.83 0.00 34.01 2.17
4519 5083 0.108851 GGTCGGCGCATCCAAAAATT 60.109 50.000 10.83 0.00 34.01 1.82
4520 5084 1.510844 GGTCGGCGCATCCAAAAAT 59.489 52.632 10.83 0.00 34.01 1.82
4521 5085 2.958576 GGTCGGCGCATCCAAAAA 59.041 55.556 10.83 0.00 34.01 1.94
4522 5086 2.783241 TACGGTCGGCGCATCCAAAA 62.783 55.000 10.83 0.00 34.01 2.44
4523 5087 3.298115 TACGGTCGGCGCATCCAAA 62.298 57.895 10.83 0.00 34.01 3.28
4524 5088 3.761140 TACGGTCGGCGCATCCAA 61.761 61.111 10.83 0.00 34.01 3.53
4525 5089 4.501714 GTACGGTCGGCGCATCCA 62.502 66.667 10.83 0.00 34.01 3.41
4531 5095 4.764336 TTGAGCGTACGGTCGGCG 62.764 66.667 34.14 0.00 44.68 6.46
4532 5096 3.177249 GTTGAGCGTACGGTCGGC 61.177 66.667 34.14 26.62 44.68 5.54
4533 5097 1.342082 CTTGTTGAGCGTACGGTCGG 61.342 60.000 34.14 20.59 44.68 4.79
4534 5098 0.662374 ACTTGTTGAGCGTACGGTCG 60.662 55.000 34.14 24.36 44.68 4.79
4535 5099 2.248487 CTACTTGTTGAGCGTACGGTC 58.752 52.381 34.12 34.12 42.37 4.79
4536 5100 1.668047 GCTACTTGTTGAGCGTACGGT 60.668 52.381 21.51 21.51 0.00 4.83
4537 5101 0.989890 GCTACTTGTTGAGCGTACGG 59.010 55.000 18.39 0.00 0.00 4.02
4538 5102 0.989890 GGCTACTTGTTGAGCGTACG 59.010 55.000 11.84 11.84 39.72 3.67
4539 5103 0.989890 CGGCTACTTGTTGAGCGTAC 59.010 55.000 0.00 0.00 39.72 3.67
4540 5104 0.734942 GCGGCTACTTGTTGAGCGTA 60.735 55.000 0.00 0.00 39.72 4.42
4541 5105 2.027625 GCGGCTACTTGTTGAGCGT 61.028 57.895 0.00 0.00 39.72 5.07
4542 5106 1.361668 ATGCGGCTACTTGTTGAGCG 61.362 55.000 0.00 0.00 39.72 5.03
4543 5107 0.375106 GATGCGGCTACTTGTTGAGC 59.625 55.000 0.00 0.00 38.00 4.26
4544 5108 2.015736 AGATGCGGCTACTTGTTGAG 57.984 50.000 0.00 0.00 0.00 3.02
4545 5109 2.076100 CAAGATGCGGCTACTTGTTGA 58.924 47.619 21.77 0.00 37.03 3.18
4546 5110 2.532531 CAAGATGCGGCTACTTGTTG 57.467 50.000 21.77 8.85 37.03 3.33
4548 5112 3.935993 ACAAGATGCGGCTACTTGT 57.064 47.368 26.31 26.31 45.79 3.16
4549 5113 2.076100 TGAACAAGATGCGGCTACTTG 58.924 47.619 25.40 25.40 44.16 3.16
4550 5114 2.076863 GTGAACAAGATGCGGCTACTT 58.923 47.619 0.00 4.03 0.00 2.24
4551 5115 1.676014 GGTGAACAAGATGCGGCTACT 60.676 52.381 0.00 0.00 0.00 2.57
4552 5116 0.727398 GGTGAACAAGATGCGGCTAC 59.273 55.000 0.00 0.00 0.00 3.58
4553 5117 0.739462 CGGTGAACAAGATGCGGCTA 60.739 55.000 0.00 0.00 0.00 3.93
4554 5118 2.034879 CGGTGAACAAGATGCGGCT 61.035 57.895 0.00 0.00 0.00 5.52
4555 5119 2.480555 CGGTGAACAAGATGCGGC 59.519 61.111 0.00 0.00 0.00 6.53
4556 5120 1.361668 CTCCGGTGAACAAGATGCGG 61.362 60.000 0.00 0.00 0.00 5.69
4557 5121 1.361668 CCTCCGGTGAACAAGATGCG 61.362 60.000 4.76 0.00 0.00 4.73
4558 5122 1.648467 GCCTCCGGTGAACAAGATGC 61.648 60.000 4.76 0.00 0.00 3.91
4559 5123 1.026718 GGCCTCCGGTGAACAAGATG 61.027 60.000 4.76 0.00 0.00 2.90
4560 5124 1.299976 GGCCTCCGGTGAACAAGAT 59.700 57.895 4.76 0.00 0.00 2.40
4561 5125 1.488705 ATGGCCTCCGGTGAACAAGA 61.489 55.000 3.32 0.00 0.00 3.02
4562 5126 0.609131 AATGGCCTCCGGTGAACAAG 60.609 55.000 3.32 0.00 0.00 3.16
4563 5127 0.178975 AAATGGCCTCCGGTGAACAA 60.179 50.000 3.32 0.00 0.00 2.83
4564 5128 0.693622 TAAATGGCCTCCGGTGAACA 59.306 50.000 3.32 3.86 0.00 3.18
4565 5129 2.052782 ATAAATGGCCTCCGGTGAAC 57.947 50.000 3.32 0.00 0.00 3.18
4566 5130 2.775384 AGTATAAATGGCCTCCGGTGAA 59.225 45.455 3.32 0.00 0.00 3.18
4567 5131 2.404559 AGTATAAATGGCCTCCGGTGA 58.595 47.619 3.32 0.00 0.00 4.02
4568 5132 2.930826 AGTATAAATGGCCTCCGGTG 57.069 50.000 3.32 0.00 0.00 4.94
4569 5133 5.128205 GTTTTAGTATAAATGGCCTCCGGT 58.872 41.667 3.32 0.00 0.00 5.28
4570 5134 5.127491 TGTTTTAGTATAAATGGCCTCCGG 58.873 41.667 3.32 0.00 0.00 5.14
4571 5135 6.687081 TTGTTTTAGTATAAATGGCCTCCG 57.313 37.500 3.32 0.00 0.00 4.63
4572 5136 6.096282 TGCTTGTTTTAGTATAAATGGCCTCC 59.904 38.462 3.32 0.00 0.00 4.30
4573 5137 7.095695 TGCTTGTTTTAGTATAAATGGCCTC 57.904 36.000 3.32 0.00 0.00 4.70
4574 5138 7.660030 ATGCTTGTTTTAGTATAAATGGCCT 57.340 32.000 3.32 0.00 0.00 5.19
4575 5139 7.595130 GCTATGCTTGTTTTAGTATAAATGGCC 59.405 37.037 0.00 0.00 0.00 5.36
4576 5140 8.134895 TGCTATGCTTGTTTTAGTATAAATGGC 58.865 33.333 0.00 0.00 0.00 4.40
4585 5149 8.792633 TGAACTATTTGCTATGCTTGTTTTAGT 58.207 29.630 0.00 0.00 0.00 2.24
4586 5150 9.624697 TTGAACTATTTGCTATGCTTGTTTTAG 57.375 29.630 0.00 0.00 0.00 1.85
4587 5151 9.973450 TTTGAACTATTTGCTATGCTTGTTTTA 57.027 25.926 0.00 0.00 0.00 1.52
4588 5152 8.885494 TTTGAACTATTTGCTATGCTTGTTTT 57.115 26.923 0.00 0.00 0.00 2.43
4589 5153 9.143631 GATTTGAACTATTTGCTATGCTTGTTT 57.856 29.630 0.00 0.00 0.00 2.83
4590 5154 8.306038 TGATTTGAACTATTTGCTATGCTTGTT 58.694 29.630 0.00 0.00 0.00 2.83
4591 5155 7.829725 TGATTTGAACTATTTGCTATGCTTGT 58.170 30.769 0.00 0.00 0.00 3.16
4592 5156 8.692110 TTGATTTGAACTATTTGCTATGCTTG 57.308 30.769 0.00 0.00 0.00 4.01
4593 5157 9.143631 GTTTGATTTGAACTATTTGCTATGCTT 57.856 29.630 0.00 0.00 0.00 3.91
4594 5158 8.306038 TGTTTGATTTGAACTATTTGCTATGCT 58.694 29.630 0.00 0.00 0.00 3.79
4595 5159 8.464770 TGTTTGATTTGAACTATTTGCTATGC 57.535 30.769 0.00 0.00 0.00 3.14
4598 5162 9.787532 GCTATGTTTGATTTGAACTATTTGCTA 57.212 29.630 0.00 0.00 0.00 3.49
4599 5163 8.306038 TGCTATGTTTGATTTGAACTATTTGCT 58.694 29.630 0.00 0.00 0.00 3.91
4600 5164 8.464770 TGCTATGTTTGATTTGAACTATTTGC 57.535 30.769 0.00 0.00 0.00 3.68
4611 5175 9.979578 TGTGAAACTATTTGCTATGTTTGATTT 57.020 25.926 0.00 0.00 38.04 2.17
4613 5177 9.793252 GATGTGAAACTATTTGCTATGTTTGAT 57.207 29.630 0.00 0.00 38.04 2.57
4614 5178 9.013229 AGATGTGAAACTATTTGCTATGTTTGA 57.987 29.630 0.00 0.00 38.04 2.69
4615 5179 9.069078 CAGATGTGAAACTATTTGCTATGTTTG 57.931 33.333 0.00 0.00 38.04 2.93
4616 5180 9.013229 TCAGATGTGAAACTATTTGCTATGTTT 57.987 29.630 0.00 0.00 38.04 2.83
4617 5181 8.565896 TCAGATGTGAAACTATTTGCTATGTT 57.434 30.769 0.00 0.00 38.04 2.71
4618 5182 8.565896 TTCAGATGTGAAACTATTTGCTATGT 57.434 30.769 2.20 0.00 39.85 2.29
4632 5196 7.201522 GCATTGTACGACTATTTCAGATGTGAA 60.202 37.037 0.23 0.23 41.13 3.18
4633 5197 6.255670 GCATTGTACGACTATTTCAGATGTGA 59.744 38.462 0.00 0.00 0.00 3.58
4634 5198 6.035975 TGCATTGTACGACTATTTCAGATGTG 59.964 38.462 0.00 0.00 0.00 3.21
4635 5199 6.106003 TGCATTGTACGACTATTTCAGATGT 58.894 36.000 0.00 0.00 0.00 3.06
4636 5200 6.588348 TGCATTGTACGACTATTTCAGATG 57.412 37.500 0.00 0.00 0.00 2.90
4637 5201 7.792374 ATTGCATTGTACGACTATTTCAGAT 57.208 32.000 0.00 0.00 0.00 2.90
4638 5202 7.333174 TCAATTGCATTGTACGACTATTTCAGA 59.667 33.333 0.00 0.00 41.02 3.27
4639 5203 7.463544 TCAATTGCATTGTACGACTATTTCAG 58.536 34.615 0.00 0.00 41.02 3.02
4640 5204 7.371126 TCAATTGCATTGTACGACTATTTCA 57.629 32.000 0.00 0.00 41.02 2.69
4641 5205 8.667987 TTTCAATTGCATTGTACGACTATTTC 57.332 30.769 0.00 0.00 41.02 2.17
4646 5210 9.469807 TTTTTATTTCAATTGCATTGTACGACT 57.530 25.926 0.00 0.00 41.02 4.18
4647 5211 9.511022 GTTTTTATTTCAATTGCATTGTACGAC 57.489 29.630 0.00 0.00 41.02 4.34
4648 5212 9.249457 TGTTTTTATTTCAATTGCATTGTACGA 57.751 25.926 0.00 0.00 41.02 3.43
4649 5213 9.855361 TTGTTTTTATTTCAATTGCATTGTACG 57.145 25.926 0.00 0.00 41.02 3.67


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.