Multiple sequence alignment - TraesCS4D01G185200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G185200 chr4D 100.000 6644 0 0 1 6644 323119853 323113210 0.000000e+00 12270.0
1 TraesCS4D01G185200 chr4A 97.380 4199 71 19 1 4189 149026771 149030940 0.000000e+00 7108.0
2 TraesCS4D01G185200 chr4A 93.180 1481 30 13 4376 5837 149031401 149032829 0.000000e+00 2109.0
3 TraesCS4D01G185200 chr4A 98.413 189 3 0 4187 4375 149031054 149031242 3.840000e-87 333.0
4 TraesCS4D01G185200 chr4A 88.971 272 16 4 6387 6644 149033247 149033518 2.310000e-84 324.0
5 TraesCS4D01G185200 chr4A 84.699 183 13 8 1 180 149026653 149026823 1.150000e-37 169.0
6 TraesCS4D01G185200 chr4A 90.698 86 8 0 599 684 507759908 507759993 1.510000e-21 115.0
7 TraesCS4D01G185200 chr4B 95.528 2527 47 12 1 2517 403276089 403273619 0.000000e+00 3980.0
8 TraesCS4D01G185200 chr4B 95.486 1994 34 12 2391 4369 403273669 403271717 0.000000e+00 3133.0
9 TraesCS4D01G185200 chr4B 97.970 788 14 1 4378 5163 403271588 403270801 0.000000e+00 1365.0
10 TraesCS4D01G185200 chr4B 95.409 501 7 5 5194 5679 403270692 403270193 0.000000e+00 784.0
11 TraesCS4D01G185200 chr4B 91.104 326 18 6 6156 6470 403270078 403269753 1.320000e-116 431.0
12 TraesCS4D01G185200 chr4B 92.537 134 10 0 6511 6644 403269747 403269614 6.800000e-45 193.0
13 TraesCS4D01G185200 chr4B 90.698 86 8 0 599 684 277228624 277228709 1.510000e-21 115.0
14 TraesCS4D01G185200 chr7B 79.685 1206 166 41 1102 2291 159615140 159616282 0.000000e+00 797.0
15 TraesCS4D01G185200 chr7B 79.668 1205 166 44 1102 2291 159613085 159614225 0.000000e+00 795.0
16 TraesCS4D01G185200 chr7B 82.308 390 49 12 988 1366 159616461 159616841 2.990000e-83 320.0
17 TraesCS4D01G185200 chr7B 100.000 73 0 0 5166 5238 732805331 732805403 1.160000e-27 135.0
18 TraesCS4D01G185200 chr7B 100.000 73 0 0 5166 5238 732830453 732830525 1.160000e-27 135.0
19 TraesCS4D01G185200 chr7B 100.000 73 0 0 5166 5238 732855599 732855671 1.160000e-27 135.0
20 TraesCS4D01G185200 chr7B 100.000 73 0 0 5166 5238 732880711 732880783 1.160000e-27 135.0
21 TraesCS4D01G185200 chr7B 90.698 86 8 0 599 684 724623094 724623009 1.510000e-21 115.0
22 TraesCS4D01G185200 chr7D 82.434 945 127 19 1102 2040 195771765 195772676 0.000000e+00 789.0
23 TraesCS4D01G185200 chr7D 75.314 1908 335 83 2941 4770 614678743 614676894 0.000000e+00 789.0
24 TraesCS4D01G185200 chr7D 86.769 325 42 1 5835 6159 631017518 631017841 1.760000e-95 361.0
25 TraesCS4D01G185200 chr7A 74.803 1905 342 85 2941 4770 710834426 710832585 0.000000e+00 732.0
26 TraesCS4D01G185200 chr7A 77.266 717 115 24 3617 4309 707122466 707123158 1.750000e-100 377.0
27 TraesCS4D01G185200 chr7A 86.769 325 41 2 5837 6159 686002222 686001898 1.760000e-95 361.0
28 TraesCS4D01G185200 chr2A 88.344 326 36 2 5834 6158 488931689 488932013 2.250000e-104 390.0
29 TraesCS4D01G185200 chr2A 87.654 324 40 0 5834 6157 216476729 216477052 1.750000e-100 377.0
30 TraesCS4D01G185200 chr2A 86.930 329 38 5 5832 6158 103345813 103345488 1.360000e-96 364.0
31 TraesCS4D01G185200 chr3D 87.385 325 41 0 5835 6159 75354869 75354545 2.260000e-99 374.0
32 TraesCS4D01G185200 chr1A 86.747 332 42 1 5833 6162 6622031 6622362 1.050000e-97 368.0
33 TraesCS4D01G185200 chr1A 96.250 80 3 0 5166 5245 527637503 527637424 1.500000e-26 132.0
34 TraesCS4D01G185200 chr2D 86.850 327 38 5 5834 6157 38193173 38193497 1.760000e-95 361.0
35 TraesCS4D01G185200 chr2D 87.727 220 18 5 715 934 453553019 453553229 1.430000e-61 248.0
36 TraesCS4D01G185200 chr2D 83.429 175 20 4 1 172 438050740 438050572 3.210000e-33 154.0
37 TraesCS4D01G185200 chr2D 83.562 146 15 2 318 463 453552803 453552939 1.940000e-25 128.0
38 TraesCS4D01G185200 chr2D 86.842 114 7 4 820 930 453553584 453553692 3.250000e-23 121.0
39 TraesCS4D01G185200 chr2D 83.810 105 16 1 78 181 453552614 453552718 1.520000e-16 99.0
40 TraesCS4D01G185200 chr3B 86.503 326 42 2 5835 6159 24919601 24919277 2.280000e-94 357.0
41 TraesCS4D01G185200 chrUn 78.906 256 35 9 686 929 318270342 318270094 8.920000e-34 156.0
42 TraesCS4D01G185200 chrUn 78.599 257 34 10 686 929 442301366 442301614 4.150000e-32 150.0
43 TraesCS4D01G185200 chrUn 89.899 99 4 3 831 929 430504357 430504449 9.050000e-24 122.0
44 TraesCS4D01G185200 chr1B 78.906 256 35 9 686 929 187961882 187961634 8.920000e-34 156.0
45 TraesCS4D01G185200 chr2B 83.429 175 20 4 1 172 514705916 514705748 3.210000e-33 154.0
46 TraesCS4D01G185200 chr2B 83.429 175 20 4 1 172 514773896 514773728 3.210000e-33 154.0
47 TraesCS4D01G185200 chr2B 90.698 86 8 0 599 684 441277142 441277227 1.510000e-21 115.0
48 TraesCS4D01G185200 chr5B 78.599 257 34 10 686 929 555483142 555483390 4.150000e-32 150.0
49 TraesCS4D01G185200 chr5B 78.210 257 35 10 686 929 476398356 476398108 1.930000e-30 145.0
50 TraesCS4D01G185200 chr5B 100.000 73 0 0 5166 5238 509429077 509429149 1.160000e-27 135.0
51 TraesCS4D01G185200 chr5B 90.698 86 8 0 599 684 476398503 476398418 1.510000e-21 115.0
52 TraesCS4D01G185200 chr5B 90.698 86 8 0 599 684 555482995 555483080 1.510000e-21 115.0
53 TraesCS4D01G185200 chr6B 98.667 75 1 0 5166 5240 466653414 466653488 4.180000e-27 134.0
54 TraesCS4D01G185200 chr6B 90.698 86 8 0 599 684 105663533 105663448 1.510000e-21 115.0
55 TraesCS4D01G185200 chr6B 80.132 151 21 9 1333 1480 30354922 30355066 3.280000e-18 104.0
56 TraesCS4D01G185200 chr6B 84.906 106 13 3 1333 1436 30465014 30465118 3.280000e-18 104.0
57 TraesCS4D01G185200 chr6D 86.275 102 13 1 1353 1453 17365543 17365644 7.040000e-20 110.0
58 TraesCS4D01G185200 chr6A 85.263 95 9 5 1333 1425 18080867 18080958 7.090000e-15 93.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G185200 chr4D 323113210 323119853 6643 True 12270.000000 12270 100.000000 1 6644 1 chr4D.!!$R1 6643
1 TraesCS4D01G185200 chr4A 149026653 149033518 6865 False 2008.600000 7108 92.528600 1 6644 5 chr4A.!!$F2 6643
2 TraesCS4D01G185200 chr4B 403269614 403276089 6475 True 1647.666667 3980 94.672333 1 6644 6 chr4B.!!$R1 6643
3 TraesCS4D01G185200 chr7B 159613085 159616841 3756 False 637.333333 797 80.553667 988 2291 3 chr7B.!!$F5 1303
4 TraesCS4D01G185200 chr7D 195771765 195772676 911 False 789.000000 789 82.434000 1102 2040 1 chr7D.!!$F1 938
5 TraesCS4D01G185200 chr7D 614676894 614678743 1849 True 789.000000 789 75.314000 2941 4770 1 chr7D.!!$R1 1829
6 TraesCS4D01G185200 chr7A 710832585 710834426 1841 True 732.000000 732 74.803000 2941 4770 1 chr7A.!!$R2 1829
7 TraesCS4D01G185200 chr7A 707122466 707123158 692 False 377.000000 377 77.266000 3617 4309 1 chr7A.!!$F1 692

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
199 318 0.681243 GCCGATTTCTTGGGGAAGCT 60.681 55.000 0.00 0.00 35.16 3.74 F
531 650 1.035932 CCCTCTTCGTCCTTCCGCTA 61.036 60.000 0.00 0.00 0.00 4.26 F
1126 1558 1.344114 GGAAAGCAAACCCAGCAATGA 59.656 47.619 0.00 0.00 0.00 2.57 F
2570 3627 0.324091 ATGGAAAAGGGAGCCAGCTG 60.324 55.000 6.78 6.78 34.74 4.24 F
2903 3966 5.718130 TGCACCTTAGTAGTTACCATACTGT 59.282 40.000 0.00 0.00 35.20 3.55 F
4892 6760 0.321564 TCAACATCGAAGTGGGGCAG 60.322 55.000 0.00 0.00 0.00 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1126 1558 2.378038 ACACTTGGTTGTTGCATCACT 58.622 42.857 0.00 0.00 0.00 3.41 R
2274 3256 4.526650 TGTGAACATGTCTAGAGGCACTTA 59.473 41.667 0.00 0.00 41.55 2.24 R
2712 3775 3.951563 TCGATCCCTTCCAATTCCATT 57.048 42.857 0.00 0.00 0.00 3.16 R
3371 4440 0.252974 TACTTGCCCTCCTGCCCTTA 60.253 55.000 0.00 0.00 0.00 2.69 R
4895 6763 0.731514 CTTCCACATTTGCGCTGCTG 60.732 55.000 9.73 5.50 0.00 4.41 R
6058 8027 0.029267 ATGGGGAAGCAGGATCCTCT 60.029 55.000 12.69 9.57 38.35 3.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
126 245 1.590698 GATTTCTCTTCGCCTCTTCGC 59.409 52.381 0.00 0.00 0.00 4.70
181 300 1.667151 TGCTCTTGCATTTGGTGGC 59.333 52.632 0.00 0.00 45.31 5.01
190 309 1.066929 GCATTTGGTGGCCGATTTCTT 60.067 47.619 0.00 0.00 0.00 2.52
199 318 0.681243 GCCGATTTCTTGGGGAAGCT 60.681 55.000 0.00 0.00 35.16 3.74
531 650 1.035932 CCCTCTTCGTCCTTCCGCTA 61.036 60.000 0.00 0.00 0.00 4.26
604 727 3.771577 TCCTCCAAGTTCCTCAGAAAC 57.228 47.619 0.00 0.00 32.58 2.78
865 991 3.404899 CTGCCAACCTGCAATTGAAAAT 58.595 40.909 10.34 0.00 41.51 1.82
946 1072 4.292186 AGTTCCAGTTCACATGCAGTAT 57.708 40.909 0.00 0.00 0.00 2.12
1040 1467 3.569277 TGCAATGCAGTGACAGTACATTT 59.431 39.130 20.00 0.00 33.32 2.32
1126 1558 1.344114 GGAAAGCAAACCCAGCAATGA 59.656 47.619 0.00 0.00 0.00 2.57
1752 2713 4.261614 GGGGCCAAACATTTATTCGATCTC 60.262 45.833 4.39 0.00 0.00 2.75
1982 2953 9.203892 TCTGTTTCAGGAGCTGATGTAGCATTA 62.204 40.741 0.00 0.00 42.47 1.90
2198 3177 7.697291 GCATGCAGTTTTTCAAAAATTCTGAAA 59.303 29.630 14.21 10.21 40.21 2.69
2435 3417 6.999950 TGCTACCTAAGTTCACTTATTGTCA 58.000 36.000 0.00 0.00 37.75 3.58
2570 3627 0.324091 ATGGAAAAGGGAGCCAGCTG 60.324 55.000 6.78 6.78 34.74 4.24
2903 3966 5.718130 TGCACCTTAGTAGTTACCATACTGT 59.282 40.000 0.00 0.00 35.20 3.55
3371 4440 4.401925 CAACAGGAAAGGGAGAGAATTGT 58.598 43.478 0.00 0.00 0.00 2.71
3520 4589 9.931210 GTATGGTGTTTATCTAATTTCCTTTCG 57.069 33.333 0.00 0.00 0.00 3.46
3593 4663 6.957920 TGTCAGGTGATTTTCAATTCAAGA 57.042 33.333 0.00 0.00 0.00 3.02
3820 5317 8.762426 GGTAAGTCTGAGCTAAAAATAATACGG 58.238 37.037 0.00 0.00 0.00 4.02
3923 5425 6.542370 GCTTGTTTCATCTTAGGCCAGTATTA 59.458 38.462 5.01 0.00 0.00 0.98
4041 5548 5.414454 TGTAATTCAGTTCCCAATTTCTCGG 59.586 40.000 0.00 0.00 0.00 4.63
4066 5573 5.195185 CCGGGGGCTATTAAGTTCTTTTTA 58.805 41.667 0.00 0.00 0.00 1.52
4339 5992 5.070446 CCACAATCTGCTAGTACCCATAGAA 59.930 44.000 0.00 0.00 0.00 2.10
4462 6278 2.803133 CGTCAAGTCAAGTCAAGAGGCA 60.803 50.000 0.00 0.00 0.00 4.75
4585 6407 8.272173 TCCTACCGGATGAAAGAAATTTTATCT 58.728 33.333 9.46 0.00 33.30 1.98
4763 6598 6.106648 TGTGAGAGACTTCTTGATTCATGT 57.893 37.500 0.00 0.00 32.53 3.21
4820 6658 1.228154 GGTTCAGTTCAAGGCGGGT 60.228 57.895 0.00 0.00 0.00 5.28
4892 6760 0.321564 TCAACATCGAAGTGGGGCAG 60.322 55.000 0.00 0.00 0.00 4.85
4893 6761 0.606401 CAACATCGAAGTGGGGCAGT 60.606 55.000 0.00 0.00 0.00 4.40
4894 6762 0.321653 AACATCGAAGTGGGGCAGTC 60.322 55.000 0.00 0.00 0.00 3.51
4895 6763 1.450312 CATCGAAGTGGGGCAGTCC 60.450 63.158 0.00 0.00 0.00 3.85
4896 6764 1.918293 ATCGAAGTGGGGCAGTCCA 60.918 57.895 0.00 0.00 37.22 4.02
4897 6765 1.903877 ATCGAAGTGGGGCAGTCCAG 61.904 60.000 0.00 0.00 37.50 3.86
4898 6766 2.360475 GAAGTGGGGCAGTCCAGC 60.360 66.667 0.00 0.00 37.50 4.85
4899 6767 3.177884 AAGTGGGGCAGTCCAGCA 61.178 61.111 0.00 0.00 37.50 4.41
4900 6768 3.201707 AAGTGGGGCAGTCCAGCAG 62.202 63.158 0.00 0.00 37.50 4.24
4906 6774 3.663176 GCAGTCCAGCAGCGCAAA 61.663 61.111 11.47 0.00 0.00 3.68
4907 6775 2.986306 GCAGTCCAGCAGCGCAAAT 61.986 57.895 11.47 0.00 0.00 2.32
4908 6776 1.154093 CAGTCCAGCAGCGCAAATG 60.154 57.895 11.47 4.25 0.00 2.32
4909 6777 1.601759 AGTCCAGCAGCGCAAATGT 60.602 52.632 11.47 0.00 0.00 2.71
4910 6778 1.443194 GTCCAGCAGCGCAAATGTG 60.443 57.895 11.47 0.00 0.00 3.21
4911 6779 2.126228 CCAGCAGCGCAAATGTGG 60.126 61.111 11.47 4.93 0.00 4.17
4912 6780 2.628696 CCAGCAGCGCAAATGTGGA 61.629 57.895 11.47 0.00 0.00 4.02
4913 6781 1.286570 CAGCAGCGCAAATGTGGAA 59.713 52.632 11.47 0.00 0.00 3.53
4914 6782 0.731514 CAGCAGCGCAAATGTGGAAG 60.732 55.000 11.47 0.00 0.00 3.46
4915 6783 1.444895 GCAGCGCAAATGTGGAAGG 60.445 57.895 11.47 0.00 0.00 3.46
4916 6784 1.213537 CAGCGCAAATGTGGAAGGG 59.786 57.895 11.47 0.00 0.00 3.95
4917 6785 1.978617 AGCGCAAATGTGGAAGGGG 60.979 57.895 11.47 0.00 0.00 4.79
4918 6786 3.005540 GCGCAAATGTGGAAGGGGG 62.006 63.158 0.30 0.00 0.00 5.40
5091 6959 1.656652 CTGAGCTGGGATGGTTTACG 58.343 55.000 0.00 0.00 0.00 3.18
5314 7268 9.096823 TGGGGTAGTATAACTATGGATGTTTAG 57.903 37.037 0.00 0.00 32.65 1.85
5364 7318 7.623715 GCAATGCAGTATTATGCTCTCTATGTG 60.624 40.741 0.00 0.00 46.63 3.21
5428 7382 8.937634 ATATTTTTGAGTTGGAATCATCAAGC 57.062 30.769 0.00 0.00 33.53 4.01
5636 7593 7.391833 GGTGAGAAAACTCATCCTAACAGAATT 59.608 37.037 0.00 0.00 35.65 2.17
5682 7651 4.513442 TCATTCGGAAACTGGATTGTAGG 58.487 43.478 0.00 0.00 0.00 3.18
5746 7715 4.440802 CCAAAATCCAAACACAAACCGAGA 60.441 41.667 0.00 0.00 0.00 4.04
5764 7733 2.937149 GAGATGGCGGGAGTAAACTTTC 59.063 50.000 0.00 0.00 0.00 2.62
5782 7751 3.692257 TTCAGGGCTTCTTTCTCTCTG 57.308 47.619 0.00 0.00 0.00 3.35
5804 7773 3.368843 GTGCCAATGATAAAGTTGCTTGC 59.631 43.478 0.00 0.00 0.00 4.01
5820 7789 1.001293 CTTGCACCACTCTAGCAGTCA 59.999 52.381 0.00 0.00 39.72 3.41
5828 7797 2.926200 CACTCTAGCAGTCATGTTTCCG 59.074 50.000 0.00 0.00 30.26 4.30
5829 7798 1.929836 CTCTAGCAGTCATGTTTCCGC 59.070 52.381 0.00 0.00 0.00 5.54
5832 7801 1.971167 GCAGTCATGTTTCCGCCCA 60.971 57.895 0.00 0.00 0.00 5.36
5833 7802 1.875963 CAGTCATGTTTCCGCCCAC 59.124 57.895 0.00 0.00 0.00 4.61
5834 7803 0.606401 CAGTCATGTTTCCGCCCACT 60.606 55.000 0.00 0.00 0.00 4.00
5835 7804 0.981183 AGTCATGTTTCCGCCCACTA 59.019 50.000 0.00 0.00 0.00 2.74
5836 7805 1.349688 AGTCATGTTTCCGCCCACTAA 59.650 47.619 0.00 0.00 0.00 2.24
5837 7806 1.737793 GTCATGTTTCCGCCCACTAAG 59.262 52.381 0.00 0.00 0.00 2.18
5838 7807 1.094785 CATGTTTCCGCCCACTAAGG 58.905 55.000 0.00 0.00 37.03 2.69
5849 7818 2.981859 CCACTAAGGGCACGTAGAAT 57.018 50.000 16.26 0.00 33.58 2.40
5851 7820 3.978687 CCACTAAGGGCACGTAGAATAG 58.021 50.000 16.26 2.74 33.58 1.73
5852 7821 3.383825 CCACTAAGGGCACGTAGAATAGT 59.616 47.826 16.26 0.00 33.58 2.12
5853 7822 4.360563 CACTAAGGGCACGTAGAATAGTG 58.639 47.826 16.26 1.49 41.01 2.74
5854 7823 2.981859 AAGGGCACGTAGAATAGTGG 57.018 50.000 0.00 0.00 38.68 4.00
5860 7829 4.910746 GCACGTAGAATAGTGGCATATG 57.089 45.455 0.00 0.00 38.68 1.78
5861 7830 3.679980 GCACGTAGAATAGTGGCATATGG 59.320 47.826 4.56 0.00 38.68 2.74
5862 7831 4.560716 GCACGTAGAATAGTGGCATATGGA 60.561 45.833 4.56 0.00 38.68 3.41
5863 7832 5.724328 CACGTAGAATAGTGGCATATGGAT 58.276 41.667 4.56 0.00 34.93 3.41
5864 7833 6.627287 GCACGTAGAATAGTGGCATATGGATA 60.627 42.308 4.56 0.00 38.68 2.59
5865 7834 6.752351 CACGTAGAATAGTGGCATATGGATAC 59.248 42.308 4.56 0.00 34.93 2.24
5866 7835 5.971792 CGTAGAATAGTGGCATATGGATACG 59.028 44.000 4.56 0.00 42.51 3.06
5867 7836 5.344743 AGAATAGTGGCATATGGATACGG 57.655 43.478 4.56 0.00 42.51 4.02
5868 7837 5.023452 AGAATAGTGGCATATGGATACGGA 58.977 41.667 4.56 0.00 42.51 4.69
5869 7838 5.663106 AGAATAGTGGCATATGGATACGGAT 59.337 40.000 4.56 0.00 42.51 4.18
5870 7839 3.616956 AGTGGCATATGGATACGGATG 57.383 47.619 4.56 0.00 42.51 3.51
5873 7842 1.668419 GCATATGGATACGGATGCCC 58.332 55.000 4.56 0.00 46.26 5.36
5874 7843 1.747206 GCATATGGATACGGATGCCCC 60.747 57.143 4.56 0.00 46.26 5.80
5875 7844 1.559219 CATATGGATACGGATGCCCCA 59.441 52.381 0.00 0.00 42.51 4.96
5876 7845 1.965414 TATGGATACGGATGCCCCAT 58.035 50.000 4.82 4.82 40.40 4.00
5877 7846 0.329261 ATGGATACGGATGCCCCATG 59.671 55.000 0.00 0.00 36.37 3.66
5878 7847 0.766288 TGGATACGGATGCCCCATGA 60.766 55.000 0.00 0.00 42.51 3.07
5879 7848 0.321653 GGATACGGATGCCCCATGAC 60.322 60.000 0.00 0.00 34.14 3.06
5880 7849 0.396435 GATACGGATGCCCCATGACA 59.604 55.000 0.00 0.00 34.14 3.58
5881 7850 0.843309 ATACGGATGCCCCATGACAA 59.157 50.000 0.00 0.00 34.14 3.18
5882 7851 0.621082 TACGGATGCCCCATGACAAA 59.379 50.000 0.00 0.00 34.14 2.83
5883 7852 0.251564 ACGGATGCCCCATGACAAAA 60.252 50.000 0.00 0.00 34.14 2.44
5884 7853 0.894141 CGGATGCCCCATGACAAAAA 59.106 50.000 0.00 0.00 34.14 1.94
5917 7886 8.457238 AAGGCTTCTATGTTGATTTATTCTCC 57.543 34.615 0.00 0.00 0.00 3.71
5918 7887 7.001073 AGGCTTCTATGTTGATTTATTCTCCC 58.999 38.462 0.00 0.00 0.00 4.30
5919 7888 7.001073 GGCTTCTATGTTGATTTATTCTCCCT 58.999 38.462 0.00 0.00 0.00 4.20
5920 7889 8.157476 GGCTTCTATGTTGATTTATTCTCCCTA 58.843 37.037 0.00 0.00 0.00 3.53
5921 7890 9.561069 GCTTCTATGTTGATTTATTCTCCCTAA 57.439 33.333 0.00 0.00 0.00 2.69
5924 7893 9.507329 TCTATGTTGATTTATTCTCCCTAATGC 57.493 33.333 0.00 0.00 0.00 3.56
5925 7894 9.288576 CTATGTTGATTTATTCTCCCTAATGCA 57.711 33.333 0.00 0.00 0.00 3.96
5926 7895 7.953005 TGTTGATTTATTCTCCCTAATGCAA 57.047 32.000 0.00 0.00 0.00 4.08
5927 7896 7.999679 TGTTGATTTATTCTCCCTAATGCAAG 58.000 34.615 0.00 0.00 0.00 4.01
5928 7897 6.639632 TGATTTATTCTCCCTAATGCAAGC 57.360 37.500 0.00 0.00 0.00 4.01
5929 7898 6.367983 TGATTTATTCTCCCTAATGCAAGCT 58.632 36.000 0.00 0.00 0.00 3.74
5930 7899 7.517320 TGATTTATTCTCCCTAATGCAAGCTA 58.483 34.615 0.00 0.00 0.00 3.32
5931 7900 7.445402 TGATTTATTCTCCCTAATGCAAGCTAC 59.555 37.037 0.00 0.00 0.00 3.58
5932 7901 6.500589 TTATTCTCCCTAATGCAAGCTACT 57.499 37.500 0.00 0.00 0.00 2.57
5933 7902 7.612065 TTATTCTCCCTAATGCAAGCTACTA 57.388 36.000 0.00 0.00 0.00 1.82
5934 7903 4.939052 TCTCCCTAATGCAAGCTACTAC 57.061 45.455 0.00 0.00 0.00 2.73
5935 7904 4.547671 TCTCCCTAATGCAAGCTACTACT 58.452 43.478 0.00 0.00 0.00 2.57
5936 7905 5.702266 TCTCCCTAATGCAAGCTACTACTA 58.298 41.667 0.00 0.00 0.00 1.82
5937 7906 5.770663 TCTCCCTAATGCAAGCTACTACTAG 59.229 44.000 0.00 0.00 0.00 2.57
5938 7907 5.455872 TCCCTAATGCAAGCTACTACTAGT 58.544 41.667 0.00 0.00 0.00 2.57
5939 7908 5.302059 TCCCTAATGCAAGCTACTACTAGTG 59.698 44.000 5.39 0.00 0.00 2.74
5940 7909 5.069251 CCCTAATGCAAGCTACTACTAGTGT 59.931 44.000 5.39 4.48 0.00 3.55
5941 7910 5.980116 CCTAATGCAAGCTACTACTAGTGTG 59.020 44.000 5.39 0.66 0.00 3.82
5942 7911 3.232213 TGCAAGCTACTACTAGTGTGC 57.768 47.619 5.39 4.50 34.71 4.57
5943 7912 2.094182 TGCAAGCTACTACTAGTGTGCC 60.094 50.000 5.39 0.00 33.89 5.01
5944 7913 2.166664 GCAAGCTACTACTAGTGTGCCT 59.833 50.000 5.39 0.78 32.24 4.75
5945 7914 3.735514 GCAAGCTACTACTAGTGTGCCTC 60.736 52.174 5.39 0.00 32.24 4.70
5946 7915 3.367646 AGCTACTACTAGTGTGCCTCA 57.632 47.619 5.39 0.00 32.24 3.86
5947 7916 3.904717 AGCTACTACTAGTGTGCCTCAT 58.095 45.455 5.39 0.00 32.24 2.90
5948 7917 3.886505 AGCTACTACTAGTGTGCCTCATC 59.113 47.826 5.39 0.00 32.24 2.92
5949 7918 3.632604 GCTACTACTAGTGTGCCTCATCA 59.367 47.826 5.39 0.00 0.00 3.07
5950 7919 4.098044 GCTACTACTAGTGTGCCTCATCAA 59.902 45.833 5.39 0.00 0.00 2.57
5951 7920 5.394224 GCTACTACTAGTGTGCCTCATCAAA 60.394 44.000 5.39 0.00 0.00 2.69
5952 7921 5.078411 ACTACTAGTGTGCCTCATCAAAG 57.922 43.478 5.39 0.00 0.00 2.77
5953 7922 4.772624 ACTACTAGTGTGCCTCATCAAAGA 59.227 41.667 5.39 0.00 0.00 2.52
5954 7923 4.623932 ACTAGTGTGCCTCATCAAAGAA 57.376 40.909 0.00 0.00 0.00 2.52
5955 7924 5.171339 ACTAGTGTGCCTCATCAAAGAAT 57.829 39.130 0.00 0.00 0.00 2.40
5956 7925 6.299805 ACTAGTGTGCCTCATCAAAGAATA 57.700 37.500 0.00 0.00 0.00 1.75
5957 7926 6.711277 ACTAGTGTGCCTCATCAAAGAATAA 58.289 36.000 0.00 0.00 0.00 1.40
5958 7927 6.820656 ACTAGTGTGCCTCATCAAAGAATAAG 59.179 38.462 0.00 0.00 0.00 1.73
5959 7928 5.809001 AGTGTGCCTCATCAAAGAATAAGA 58.191 37.500 0.00 0.00 0.00 2.10
5960 7929 6.240894 AGTGTGCCTCATCAAAGAATAAGAA 58.759 36.000 0.00 0.00 0.00 2.52
5961 7930 6.373774 AGTGTGCCTCATCAAAGAATAAGAAG 59.626 38.462 0.00 0.00 0.00 2.85
5962 7931 6.150140 GTGTGCCTCATCAAAGAATAAGAAGT 59.850 38.462 0.00 0.00 0.00 3.01
5963 7932 6.149973 TGTGCCTCATCAAAGAATAAGAAGTG 59.850 38.462 0.00 0.00 0.00 3.16
5964 7933 6.372659 GTGCCTCATCAAAGAATAAGAAGTGA 59.627 38.462 0.00 0.00 0.00 3.41
5965 7934 6.372659 TGCCTCATCAAAGAATAAGAAGTGAC 59.627 38.462 0.00 0.00 0.00 3.67
5966 7935 6.372659 GCCTCATCAAAGAATAAGAAGTGACA 59.627 38.462 0.00 0.00 0.00 3.58
5967 7936 7.625185 GCCTCATCAAAGAATAAGAAGTGACAC 60.625 40.741 0.00 0.00 0.00 3.67
5968 7937 7.605691 CCTCATCAAAGAATAAGAAGTGACACT 59.394 37.037 1.07 1.07 0.00 3.55
5969 7938 8.908786 TCATCAAAGAATAAGAAGTGACACTT 57.091 30.769 20.70 20.70 41.95 3.16
5970 7939 9.996554 TCATCAAAGAATAAGAAGTGACACTTA 57.003 29.630 20.61 6.29 38.80 2.24
5976 7945 9.694137 AAGAATAAGAAGTGACACTTACTACAC 57.306 33.333 20.61 7.51 38.80 2.90
5977 7946 8.857098 AGAATAAGAAGTGACACTTACTACACA 58.143 33.333 20.61 3.29 38.80 3.72
5978 7947 9.640963 GAATAAGAAGTGACACTTACTACACAT 57.359 33.333 20.61 3.48 38.80 3.21
5979 7948 8.988064 ATAAGAAGTGACACTTACTACACATG 57.012 34.615 20.61 0.00 38.80 3.21
5980 7949 5.230942 AGAAGTGACACTTACTACACATGC 58.769 41.667 20.61 4.71 38.80 4.06
5981 7950 4.600692 AGTGACACTTACTACACATGCA 57.399 40.909 1.07 0.00 35.97 3.96
5982 7951 5.152623 AGTGACACTTACTACACATGCAT 57.847 39.130 1.07 0.00 35.97 3.96
5983 7952 5.171476 AGTGACACTTACTACACATGCATC 58.829 41.667 1.07 0.00 35.97 3.91
5984 7953 4.330074 GTGACACTTACTACACATGCATCC 59.670 45.833 0.00 0.00 34.05 3.51
5985 7954 3.871594 GACACTTACTACACATGCATCCC 59.128 47.826 0.00 0.00 0.00 3.85
5986 7955 3.519510 ACACTTACTACACATGCATCCCT 59.480 43.478 0.00 0.00 0.00 4.20
5987 7956 4.019321 ACACTTACTACACATGCATCCCTT 60.019 41.667 0.00 0.00 0.00 3.95
5988 7957 4.572389 CACTTACTACACATGCATCCCTTC 59.428 45.833 0.00 0.00 0.00 3.46
5989 7958 4.471386 ACTTACTACACATGCATCCCTTCT 59.529 41.667 0.00 0.00 0.00 2.85
5990 7959 3.550437 ACTACACATGCATCCCTTCTC 57.450 47.619 0.00 0.00 0.00 2.87
5991 7960 3.110705 ACTACACATGCATCCCTTCTCT 58.889 45.455 0.00 0.00 0.00 3.10
5992 7961 3.521126 ACTACACATGCATCCCTTCTCTT 59.479 43.478 0.00 0.00 0.00 2.85
5993 7962 2.996631 ACACATGCATCCCTTCTCTTC 58.003 47.619 0.00 0.00 0.00 2.87
5994 7963 2.295885 CACATGCATCCCTTCTCTTCC 58.704 52.381 0.00 0.00 0.00 3.46
5995 7964 1.213926 ACATGCATCCCTTCTCTTCCC 59.786 52.381 0.00 0.00 0.00 3.97
5996 7965 1.493871 CATGCATCCCTTCTCTTCCCT 59.506 52.381 0.00 0.00 0.00 4.20
5997 7966 1.673767 TGCATCCCTTCTCTTCCCTT 58.326 50.000 0.00 0.00 0.00 3.95
5998 7967 1.995542 TGCATCCCTTCTCTTCCCTTT 59.004 47.619 0.00 0.00 0.00 3.11
5999 7968 3.189606 TGCATCCCTTCTCTTCCCTTTA 58.810 45.455 0.00 0.00 0.00 1.85
6000 7969 3.591527 TGCATCCCTTCTCTTCCCTTTAA 59.408 43.478 0.00 0.00 0.00 1.52
6001 7970 3.948473 GCATCCCTTCTCTTCCCTTTAAC 59.052 47.826 0.00 0.00 0.00 2.01
6002 7971 4.324641 GCATCCCTTCTCTTCCCTTTAACT 60.325 45.833 0.00 0.00 0.00 2.24
6003 7972 5.808050 GCATCCCTTCTCTTCCCTTTAACTT 60.808 44.000 0.00 0.00 0.00 2.66
6004 7973 5.924769 TCCCTTCTCTTCCCTTTAACTTT 57.075 39.130 0.00 0.00 0.00 2.66
6005 7974 6.275692 TCCCTTCTCTTCCCTTTAACTTTT 57.724 37.500 0.00 0.00 0.00 2.27
6006 7975 6.304624 TCCCTTCTCTTCCCTTTAACTTTTC 58.695 40.000 0.00 0.00 0.00 2.29
6007 7976 6.102762 TCCCTTCTCTTCCCTTTAACTTTTCT 59.897 38.462 0.00 0.00 0.00 2.52
6008 7977 7.294008 TCCCTTCTCTTCCCTTTAACTTTTCTA 59.706 37.037 0.00 0.00 0.00 2.10
6009 7978 7.942894 CCCTTCTCTTCCCTTTAACTTTTCTAA 59.057 37.037 0.00 0.00 0.00 2.10
6010 7979 8.784994 CCTTCTCTTCCCTTTAACTTTTCTAAC 58.215 37.037 0.00 0.00 0.00 2.34
6011 7980 9.562408 CTTCTCTTCCCTTTAACTTTTCTAACT 57.438 33.333 0.00 0.00 0.00 2.24
6012 7981 9.916360 TTCTCTTCCCTTTAACTTTTCTAACTT 57.084 29.630 0.00 0.00 0.00 2.66
6013 7982 9.916360 TCTCTTCCCTTTAACTTTTCTAACTTT 57.084 29.630 0.00 0.00 0.00 2.66
6018 7987 9.357161 TCCCTTTAACTTTTCTAACTTTATGCA 57.643 29.630 0.00 0.00 0.00 3.96
6019 7988 9.406828 CCCTTTAACTTTTCTAACTTTATGCAC 57.593 33.333 0.00 0.00 0.00 4.57
6020 7989 9.406828 CCTTTAACTTTTCTAACTTTATGCACC 57.593 33.333 0.00 0.00 0.00 5.01
6021 7990 9.113876 CTTTAACTTTTCTAACTTTATGCACCG 57.886 33.333 0.00 0.00 0.00 4.94
6022 7991 5.622770 ACTTTTCTAACTTTATGCACCGG 57.377 39.130 0.00 0.00 0.00 5.28
6023 7992 5.310451 ACTTTTCTAACTTTATGCACCGGA 58.690 37.500 9.46 0.00 0.00 5.14
6024 7993 5.180680 ACTTTTCTAACTTTATGCACCGGAC 59.819 40.000 9.46 0.00 0.00 4.79
6025 7994 3.255969 TCTAACTTTATGCACCGGACC 57.744 47.619 9.46 0.00 0.00 4.46
6026 7995 2.568062 TCTAACTTTATGCACCGGACCA 59.432 45.455 9.46 4.56 0.00 4.02
6027 7996 2.507407 AACTTTATGCACCGGACCAT 57.493 45.000 9.46 12.68 0.00 3.55
6028 7997 3.637911 AACTTTATGCACCGGACCATA 57.362 42.857 9.46 11.57 0.00 2.74
6029 7998 3.857157 ACTTTATGCACCGGACCATAT 57.143 42.857 9.46 0.00 0.00 1.78
6030 7999 4.164843 ACTTTATGCACCGGACCATATT 57.835 40.909 9.46 0.00 0.00 1.28
6031 8000 4.532834 ACTTTATGCACCGGACCATATTT 58.467 39.130 9.46 0.00 0.00 1.40
6032 8001 4.953579 ACTTTATGCACCGGACCATATTTT 59.046 37.500 9.46 0.00 0.00 1.82
6033 8002 5.420739 ACTTTATGCACCGGACCATATTTTT 59.579 36.000 9.46 0.00 0.00 1.94
6051 8020 2.413310 TTTCTCTCCAAATACCCGCC 57.587 50.000 0.00 0.00 0.00 6.13
6052 8021 1.580059 TTCTCTCCAAATACCCGCCT 58.420 50.000 0.00 0.00 0.00 5.52
6053 8022 1.120530 TCTCTCCAAATACCCGCCTC 58.879 55.000 0.00 0.00 0.00 4.70
6054 8023 0.106894 CTCTCCAAATACCCGCCTCC 59.893 60.000 0.00 0.00 0.00 4.30
6055 8024 0.326238 TCTCCAAATACCCGCCTCCT 60.326 55.000 0.00 0.00 0.00 3.69
6056 8025 1.062734 TCTCCAAATACCCGCCTCCTA 60.063 52.381 0.00 0.00 0.00 2.94
6057 8026 1.070289 CTCCAAATACCCGCCTCCTAC 59.930 57.143 0.00 0.00 0.00 3.18
6058 8027 0.834612 CCAAATACCCGCCTCCTACA 59.165 55.000 0.00 0.00 0.00 2.74
6059 8028 1.202651 CCAAATACCCGCCTCCTACAG 60.203 57.143 0.00 0.00 0.00 2.74
6060 8029 1.760613 CAAATACCCGCCTCCTACAGA 59.239 52.381 0.00 0.00 0.00 3.41
6061 8030 1.705873 AATACCCGCCTCCTACAGAG 58.294 55.000 0.00 0.00 42.83 3.35
6074 8043 1.691434 CTACAGAGGATCCTGCTTCCC 59.309 57.143 22.02 2.92 37.68 3.97
6075 8044 0.985490 ACAGAGGATCCTGCTTCCCC 60.985 60.000 22.02 2.07 37.68 4.81
6076 8045 0.984961 CAGAGGATCCTGCTTCCCCA 60.985 60.000 22.02 0.00 33.66 4.96
6077 8046 0.029267 AGAGGATCCTGCTTCCCCAT 60.029 55.000 22.02 0.00 33.66 4.00
6078 8047 0.399833 GAGGATCCTGCTTCCCCATC 59.600 60.000 22.02 0.00 33.45 3.51
6079 8048 1.064824 AGGATCCTGCTTCCCCATCC 61.065 60.000 15.29 0.00 33.45 3.51
6080 8049 1.072159 GATCCTGCTTCCCCATCCG 59.928 63.158 0.00 0.00 0.00 4.18
6081 8050 1.384502 ATCCTGCTTCCCCATCCGA 60.385 57.895 0.00 0.00 0.00 4.55
6082 8051 0.988145 ATCCTGCTTCCCCATCCGAA 60.988 55.000 0.00 0.00 0.00 4.30
6083 8052 1.452108 CCTGCTTCCCCATCCGAAC 60.452 63.158 0.00 0.00 0.00 3.95
6084 8053 1.452108 CTGCTTCCCCATCCGAACC 60.452 63.158 0.00 0.00 0.00 3.62
6085 8054 1.915078 CTGCTTCCCCATCCGAACCT 61.915 60.000 0.00 0.00 0.00 3.50
6086 8055 0.619255 TGCTTCCCCATCCGAACCTA 60.619 55.000 0.00 0.00 0.00 3.08
6087 8056 0.179054 GCTTCCCCATCCGAACCTAC 60.179 60.000 0.00 0.00 0.00 3.18
6088 8057 1.497161 CTTCCCCATCCGAACCTACT 58.503 55.000 0.00 0.00 0.00 2.57
6089 8058 1.838077 CTTCCCCATCCGAACCTACTT 59.162 52.381 0.00 0.00 0.00 2.24
6090 8059 1.961133 TCCCCATCCGAACCTACTTT 58.039 50.000 0.00 0.00 0.00 2.66
6091 8060 2.271777 TCCCCATCCGAACCTACTTTT 58.728 47.619 0.00 0.00 0.00 2.27
6092 8061 2.645797 TCCCCATCCGAACCTACTTTTT 59.354 45.455 0.00 0.00 0.00 1.94
6093 8062 3.845398 TCCCCATCCGAACCTACTTTTTA 59.155 43.478 0.00 0.00 0.00 1.52
6094 8063 4.475747 TCCCCATCCGAACCTACTTTTTAT 59.524 41.667 0.00 0.00 0.00 1.40
6095 8064 4.578928 CCCCATCCGAACCTACTTTTTATG 59.421 45.833 0.00 0.00 0.00 1.90
6096 8065 5.190677 CCCATCCGAACCTACTTTTTATGT 58.809 41.667 0.00 0.00 0.00 2.29
6097 8066 5.650703 CCCATCCGAACCTACTTTTTATGTT 59.349 40.000 0.00 0.00 0.00 2.71
6098 8067 6.824704 CCCATCCGAACCTACTTTTTATGTTA 59.175 38.462 0.00 0.00 0.00 2.41
6099 8068 7.501225 CCCATCCGAACCTACTTTTTATGTTAT 59.499 37.037 0.00 0.00 0.00 1.89
6100 8069 8.557029 CCATCCGAACCTACTTTTTATGTTATC 58.443 37.037 0.00 0.00 0.00 1.75
6101 8070 8.557029 CATCCGAACCTACTTTTTATGTTATCC 58.443 37.037 0.00 0.00 0.00 2.59
6102 8071 6.757947 TCCGAACCTACTTTTTATGTTATCCG 59.242 38.462 0.00 0.00 0.00 4.18
6103 8072 6.757947 CCGAACCTACTTTTTATGTTATCCGA 59.242 38.462 0.00 0.00 0.00 4.55
6104 8073 7.278424 CCGAACCTACTTTTTATGTTATCCGAA 59.722 37.037 0.00 0.00 0.00 4.30
6105 8074 8.112449 CGAACCTACTTTTTATGTTATCCGAAC 58.888 37.037 0.00 0.00 0.00 3.95
6106 8075 7.854557 ACCTACTTTTTATGTTATCCGAACC 57.145 36.000 0.00 0.00 0.00 3.62
6107 8076 7.627311 ACCTACTTTTTATGTTATCCGAACCT 58.373 34.615 0.00 0.00 0.00 3.50
6108 8077 8.761689 ACCTACTTTTTATGTTATCCGAACCTA 58.238 33.333 0.00 0.00 0.00 3.08
6109 8078 9.038803 CCTACTTTTTATGTTATCCGAACCTAC 57.961 37.037 0.00 0.00 0.00 3.18
6110 8079 9.590451 CTACTTTTTATGTTATCCGAACCTACA 57.410 33.333 0.00 0.00 0.00 2.74
6112 8081 8.889717 ACTTTTTATGTTATCCGAACCTACATG 58.110 33.333 0.00 0.00 32.23 3.21
6113 8082 7.795482 TTTTATGTTATCCGAACCTACATGG 57.205 36.000 0.00 0.00 42.93 3.66
6114 8083 3.188159 TGTTATCCGAACCTACATGGC 57.812 47.619 0.00 0.00 40.22 4.40
6115 8084 2.502130 TGTTATCCGAACCTACATGGCA 59.498 45.455 0.00 0.00 40.22 4.92
6116 8085 3.135712 TGTTATCCGAACCTACATGGCAT 59.864 43.478 0.00 0.00 40.22 4.40
6117 8086 2.260844 ATCCGAACCTACATGGCATG 57.739 50.000 25.31 25.31 40.22 4.06
6118 8087 0.908910 TCCGAACCTACATGGCATGT 59.091 50.000 33.18 33.18 46.92 3.21
6119 8088 1.016627 CCGAACCTACATGGCATGTG 58.983 55.000 36.61 25.38 44.60 3.21
6120 8089 1.406751 CCGAACCTACATGGCATGTGA 60.407 52.381 36.61 21.58 44.60 3.58
6121 8090 1.935873 CGAACCTACATGGCATGTGAG 59.064 52.381 36.61 28.97 44.60 3.51
6122 8091 2.292267 GAACCTACATGGCATGTGAGG 58.708 52.381 36.61 33.88 44.60 3.86
6123 8092 0.107017 ACCTACATGGCATGTGAGGC 60.107 55.000 36.61 0.00 44.60 4.70
6135 8104 3.016971 TGAGGCATCACCCTGGGG 61.017 66.667 18.88 7.87 40.58 4.96
6136 8105 4.512914 GAGGCATCACCCTGGGGC 62.513 72.222 18.88 10.49 40.58 5.80
6138 8107 3.096495 GGCATCACCCTGGGGCTA 61.096 66.667 18.88 1.65 39.32 3.93
6139 8108 2.464403 GGCATCACCCTGGGGCTAT 61.464 63.158 18.88 4.24 39.32 2.97
6140 8109 1.228367 GCATCACCCTGGGGCTATG 60.228 63.158 18.88 17.03 39.32 2.23
6141 8110 1.228367 CATCACCCTGGGGCTATGC 60.228 63.158 18.88 0.00 39.32 3.14
6142 8111 1.697394 ATCACCCTGGGGCTATGCA 60.697 57.895 18.88 0.00 39.32 3.96
6143 8112 1.070127 ATCACCCTGGGGCTATGCAT 61.070 55.000 18.88 3.79 39.32 3.96
6144 8113 1.231068 CACCCTGGGGCTATGCATT 59.769 57.895 18.88 0.00 39.32 3.56
6145 8114 1.111116 CACCCTGGGGCTATGCATTG 61.111 60.000 18.88 3.55 39.32 2.82
6146 8115 1.532316 CCCTGGGGCTATGCATTGG 60.532 63.158 3.54 0.00 0.00 3.16
6147 8116 2.205152 CCTGGGGCTATGCATTGGC 61.205 63.158 23.20 23.20 41.68 4.52
6148 8117 2.123338 TGGGGCTATGCATTGGCC 60.123 61.111 35.14 35.14 45.04 5.36
6149 8118 2.123338 GGGGCTATGCATTGGCCA 60.123 61.111 39.75 0.00 46.96 5.36
6150 8119 1.534717 GGGGCTATGCATTGGCCAT 60.535 57.895 39.75 7.48 46.96 4.40
6151 8120 1.669440 GGGCTATGCATTGGCCATG 59.331 57.895 36.79 8.63 46.87 3.66
6180 8149 1.599518 GCCCATCGTGTGTCCAACA 60.600 57.895 0.00 0.00 36.04 3.33
6187 8156 1.243342 CGTGTGTCCAACATGCCCAT 61.243 55.000 0.00 0.00 41.97 4.00
6216 8185 1.136774 GGCCATTTTTCTCGTCGCC 59.863 57.895 0.00 0.00 0.00 5.54
6233 8202 1.444119 GCCTGCACCGTTTTCTGTCA 61.444 55.000 0.00 0.00 0.00 3.58
6244 8213 3.187227 CGTTTTCTGTCAAGATGTCCTGG 59.813 47.826 0.00 0.00 30.72 4.45
6292 8262 2.280628 GCTAGCGGCTATGAAACAACT 58.719 47.619 10.62 0.00 38.06 3.16
6293 8263 2.030946 GCTAGCGGCTATGAAACAACTG 59.969 50.000 10.62 0.00 38.06 3.16
6318 8288 3.134804 ACCAAGGCATGTATAGACACTCC 59.865 47.826 0.00 0.00 38.76 3.85
6323 8293 4.101741 AGGCATGTATAGACACTCCTTTCC 59.898 45.833 6.56 0.00 37.35 3.13
6336 8306 1.366435 TCCTTTCCTTCTAGGCCTCCT 59.634 52.381 9.68 0.00 34.61 3.69
6337 8307 2.590611 TCCTTTCCTTCTAGGCCTCCTA 59.409 50.000 9.68 0.00 34.61 2.94
6385 8357 0.326048 CCATCTCACCACCCTCCTCT 60.326 60.000 0.00 0.00 0.00 3.69
6467 8631 3.753272 GCTAACCTTGAAGCTCATGACAA 59.247 43.478 0.00 0.00 35.80 3.18
6473 8637 2.259917 TGAAGCTCATGACAAGGAGGA 58.740 47.619 8.93 0.00 34.73 3.71
6474 8638 2.235650 TGAAGCTCATGACAAGGAGGAG 59.764 50.000 8.93 0.00 34.73 3.69
6475 8639 1.202330 AGCTCATGACAAGGAGGAGG 58.798 55.000 8.93 0.00 34.73 4.30
6476 8640 1.198713 GCTCATGACAAGGAGGAGGA 58.801 55.000 8.93 0.00 34.73 3.71
6477 8641 1.138661 GCTCATGACAAGGAGGAGGAG 59.861 57.143 8.93 0.00 34.73 3.69
6478 8642 1.761784 CTCATGACAAGGAGGAGGAGG 59.238 57.143 0.00 0.00 30.40 4.30
6479 8643 1.362584 TCATGACAAGGAGGAGGAGGA 59.637 52.381 0.00 0.00 0.00 3.71
6480 8644 1.761784 CATGACAAGGAGGAGGAGGAG 59.238 57.143 0.00 0.00 0.00 3.69
6481 8645 0.041833 TGACAAGGAGGAGGAGGAGG 59.958 60.000 0.00 0.00 0.00 4.30
6482 8646 1.306568 ACAAGGAGGAGGAGGAGGC 60.307 63.158 0.00 0.00 0.00 4.70
6483 8647 1.002792 CAAGGAGGAGGAGGAGGCT 59.997 63.158 0.00 0.00 0.00 4.58
6484 8648 1.002792 AAGGAGGAGGAGGAGGCTG 59.997 63.158 0.00 0.00 0.00 4.85
6485 8649 1.522917 AAGGAGGAGGAGGAGGCTGA 61.523 60.000 0.00 0.00 0.00 4.26
6486 8650 1.760480 GGAGGAGGAGGAGGCTGAC 60.760 68.421 0.00 0.00 0.00 3.51
6487 8651 1.000993 GAGGAGGAGGAGGCTGACA 59.999 63.158 0.00 0.00 0.00 3.58
6488 8652 1.305718 AGGAGGAGGAGGCTGACAC 60.306 63.158 0.00 0.00 0.00 3.67
6489 8653 2.363172 GGAGGAGGAGGCTGACACC 61.363 68.421 0.00 0.00 0.00 4.16
6490 8654 1.610673 GAGGAGGAGGCTGACACCA 60.611 63.158 0.00 0.00 0.00 4.17
6491 8655 1.152030 AGGAGGAGGCTGACACCAA 60.152 57.895 0.00 0.00 0.00 3.67
6492 8656 1.003233 GGAGGAGGCTGACACCAAC 60.003 63.158 0.00 0.00 0.00 3.77
6493 8657 1.754745 GAGGAGGCTGACACCAACA 59.245 57.895 0.00 0.00 0.00 3.33
6494 8658 0.326264 GAGGAGGCTGACACCAACAT 59.674 55.000 0.00 0.00 0.00 2.71
6495 8659 0.773644 AGGAGGCTGACACCAACATT 59.226 50.000 0.00 0.00 0.00 2.71
6496 8660 1.985159 AGGAGGCTGACACCAACATTA 59.015 47.619 0.00 0.00 0.00 1.90
6497 8661 2.578021 AGGAGGCTGACACCAACATTAT 59.422 45.455 0.00 0.00 0.00 1.28
6498 8662 2.684881 GGAGGCTGACACCAACATTATG 59.315 50.000 0.00 0.00 0.00 1.90
6499 8663 2.684881 GAGGCTGACACCAACATTATGG 59.315 50.000 0.00 0.00 46.38 2.74
6500 8664 1.134946 GGCTGACACCAACATTATGGC 59.865 52.381 0.00 0.00 44.75 4.40
6501 8665 1.134946 GCTGACACCAACATTATGGCC 59.865 52.381 0.00 0.00 44.75 5.36
6502 8666 2.726821 CTGACACCAACATTATGGCCT 58.273 47.619 3.32 0.00 44.75 5.19
6503 8667 2.684881 CTGACACCAACATTATGGCCTC 59.315 50.000 3.32 0.00 44.75 4.70
6504 8668 1.670811 GACACCAACATTATGGCCTCG 59.329 52.381 3.32 0.00 44.75 4.63
6505 8669 1.004277 ACACCAACATTATGGCCTCGT 59.996 47.619 3.32 0.00 44.75 4.18
6506 8670 1.670811 CACCAACATTATGGCCTCGTC 59.329 52.381 3.32 0.00 44.75 4.20
6507 8671 0.937304 CCAACATTATGGCCTCGTCG 59.063 55.000 3.32 0.00 32.78 5.12
6508 8672 1.472552 CCAACATTATGGCCTCGTCGA 60.473 52.381 3.32 0.00 32.78 4.20
6509 8673 2.276201 CAACATTATGGCCTCGTCGAA 58.724 47.619 3.32 0.00 0.00 3.71
6587 8798 3.370978 CCAACATCGTGTTATGGACTCAC 59.629 47.826 3.60 0.00 38.77 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 0.102300 AGGCAGCAACCAAAACGAAC 59.898 50.000 0.00 0.00 0.00 3.95
10 11 0.383949 GAGGCAGCAACCAAAACGAA 59.616 50.000 0.00 0.00 0.00 3.85
11 12 0.465460 AGAGGCAGCAACCAAAACGA 60.465 50.000 0.00 0.00 0.00 3.85
56 57 4.855340 TCCTCCATGTCCAGGAAAATAAC 58.145 43.478 0.00 0.00 35.75 1.89
126 245 5.977129 ACAGCAAAAACGAACAAAATAGGAG 59.023 36.000 0.00 0.00 0.00 3.69
181 300 1.340017 TGAGCTTCCCCAAGAAATCGG 60.340 52.381 0.00 0.00 32.88 4.18
190 309 1.541310 AACGACGATGAGCTTCCCCA 61.541 55.000 0.00 0.00 0.00 4.96
199 318 1.092348 ACGGAGATCAACGACGATGA 58.908 50.000 10.38 10.38 0.00 2.92
531 650 7.568349 TGAGAACAATAATTAGCACTCCAGAT 58.432 34.615 0.00 0.00 0.00 2.90
604 727 4.752101 CCAAGGAAGTACAGACAAACTCAG 59.248 45.833 0.00 0.00 0.00 3.35
946 1072 6.252599 ACAGCTAAATAACTCCCATCATGA 57.747 37.500 0.00 0.00 0.00 3.07
1040 1467 6.488683 ACCAGCAAAAACTAGCATGTAAACTA 59.511 34.615 0.00 0.00 0.00 2.24
1126 1558 2.378038 ACACTTGGTTGTTGCATCACT 58.622 42.857 0.00 0.00 0.00 3.41
1830 2793 7.934120 ACACTAGCTGAAATATCCCTTCAATAC 59.066 37.037 0.00 0.00 32.57 1.89
1831 2794 8.034313 ACACTAGCTGAAATATCCCTTCAATA 57.966 34.615 0.00 0.00 32.57 1.90
2274 3256 4.526650 TGTGAACATGTCTAGAGGCACTTA 59.473 41.667 0.00 0.00 41.55 2.24
2570 3627 9.449719 TTTCAAAGTTCTATTAACAGGAGGATC 57.550 33.333 0.00 0.00 0.00 3.36
2712 3775 3.951563 TCGATCCCTTCCAATTCCATT 57.048 42.857 0.00 0.00 0.00 3.16
2903 3966 5.913137 ACTCAAACACACCTCAATTTTGA 57.087 34.783 0.00 0.00 35.45 2.69
3371 4440 0.252974 TACTTGCCCTCCTGCCCTTA 60.253 55.000 0.00 0.00 0.00 2.69
3501 4570 9.124807 CCAACAACGAAAGGAAATTAGATAAAC 57.875 33.333 0.00 0.00 0.00 2.01
3602 4672 1.597742 TGTTCTGCAGGAGACAAAGC 58.402 50.000 15.13 0.00 0.00 3.51
3816 5313 4.951254 TCACAATGAAACAGTCTTCCGTA 58.049 39.130 0.00 0.00 0.00 4.02
3820 5317 6.551385 AGTCATCACAATGAAACAGTCTTC 57.449 37.500 0.00 0.00 43.42 2.87
4041 5548 1.767088 AGAACTTAATAGCCCCCGGTC 59.233 52.381 0.00 0.00 0.00 4.79
4066 5573 4.762251 GCCCTTTCAGTAACTTGAACTCAT 59.238 41.667 0.00 0.00 36.84 2.90
4259 5886 1.209127 GGACGGAAAACATGGCACG 59.791 57.895 0.00 0.00 0.00 5.34
4339 5992 7.572523 TGAAACATGAGAACAAAGATCTGTT 57.427 32.000 0.00 0.00 42.23 3.16
4462 6278 2.884639 ACGCTGCCTTACAAAATCAACT 59.115 40.909 0.00 0.00 0.00 3.16
4585 6407 5.565509 TCCTTCAACAATGTTATGCTACCA 58.434 37.500 0.00 0.00 0.00 3.25
4597 6419 4.217118 GTGCAGAGTCATTCCTTCAACAAT 59.783 41.667 0.00 0.00 0.00 2.71
4763 6598 1.306141 ACTCATTCTCCGGCCCAGA 60.306 57.895 0.00 0.00 0.00 3.86
4892 6760 1.443194 CACATTTGCGCTGCTGGAC 60.443 57.895 9.73 0.00 0.00 4.02
4893 6761 2.628696 CCACATTTGCGCTGCTGGA 61.629 57.895 9.73 0.00 0.00 3.86
4894 6762 2.126228 CCACATTTGCGCTGCTGG 60.126 61.111 9.73 5.73 0.00 4.85
4895 6763 0.731514 CTTCCACATTTGCGCTGCTG 60.732 55.000 9.73 5.50 0.00 4.41
4896 6764 1.582968 CTTCCACATTTGCGCTGCT 59.417 52.632 9.73 0.00 0.00 4.24
4897 6765 1.444895 CCTTCCACATTTGCGCTGC 60.445 57.895 9.73 0.00 0.00 5.25
4898 6766 1.213537 CCCTTCCACATTTGCGCTG 59.786 57.895 9.73 0.08 0.00 5.18
4899 6767 1.978617 CCCCTTCCACATTTGCGCT 60.979 57.895 9.73 0.00 0.00 5.92
4900 6768 2.573340 CCCCTTCCACATTTGCGC 59.427 61.111 0.00 0.00 0.00 6.09
4901 6769 3.287445 CCCCCTTCCACATTTGCG 58.713 61.111 0.00 0.00 0.00 4.85
4919 6787 2.639327 ATTTCCGTTGCTGGGCTGC 61.639 57.895 0.00 0.00 0.00 5.25
4920 6788 1.213537 CATTTCCGTTGCTGGGCTG 59.786 57.895 0.00 0.00 0.00 4.85
4921 6789 0.962356 CTCATTTCCGTTGCTGGGCT 60.962 55.000 0.00 0.00 0.00 5.19
5059 6927 2.630158 CAGCTCAGGATCACCTTTCAG 58.370 52.381 0.00 0.00 45.36 3.02
5091 6959 3.914364 CGACAAAGAGCAAAAATAGCACC 59.086 43.478 0.00 0.00 0.00 5.01
5314 7268 6.128063 GCATAGAGGAATTATCATCAAGGCAC 60.128 42.308 0.00 0.00 38.82 5.01
5364 7318 3.782889 AAAGCACACCAGACAAGAAAC 57.217 42.857 0.00 0.00 0.00 2.78
5428 7382 9.357652 GCCCATTAATAACACTTGCATTATATG 57.642 33.333 0.00 0.00 0.00 1.78
5666 7635 2.026262 TGGAGCCTACAATCCAGTTTCC 60.026 50.000 0.00 0.00 40.70 3.13
5682 7651 4.036380 CGTCCCAACCTTTAAATATGGAGC 59.964 45.833 12.99 6.66 32.82 4.70
5746 7715 2.618045 CCTGAAAGTTTACTCCCGCCAT 60.618 50.000 0.00 0.00 0.00 4.40
5764 7733 2.697654 CACAGAGAGAAAGAAGCCCTG 58.302 52.381 0.00 0.00 0.00 4.45
5782 7751 3.368843 GCAAGCAACTTTATCATTGGCAC 59.631 43.478 0.00 0.00 0.00 5.01
5804 7773 3.325293 AACATGACTGCTAGAGTGGTG 57.675 47.619 0.00 0.00 33.83 4.17
5820 7789 3.569873 CCTTAGTGGGCGGAAACAT 57.430 52.632 0.00 0.00 0.00 2.71
5832 7801 3.383825 CCACTATTCTACGTGCCCTTAGT 59.616 47.826 0.00 0.00 0.00 2.24
5833 7802 3.799232 GCCACTATTCTACGTGCCCTTAG 60.799 52.174 0.00 0.00 0.00 2.18
5834 7803 2.101917 GCCACTATTCTACGTGCCCTTA 59.898 50.000 0.00 0.00 0.00 2.69
5835 7804 1.134491 GCCACTATTCTACGTGCCCTT 60.134 52.381 0.00 0.00 0.00 3.95
5836 7805 0.464452 GCCACTATTCTACGTGCCCT 59.536 55.000 0.00 0.00 0.00 5.19
5837 7806 0.177141 TGCCACTATTCTACGTGCCC 59.823 55.000 0.00 0.00 0.00 5.36
5838 7807 2.240493 ATGCCACTATTCTACGTGCC 57.760 50.000 0.00 0.00 0.00 5.01
5839 7808 3.679980 CCATATGCCACTATTCTACGTGC 59.320 47.826 0.00 0.00 0.00 5.34
5840 7809 5.134202 TCCATATGCCACTATTCTACGTG 57.866 43.478 0.00 0.00 0.00 4.49
5841 7810 6.404403 CGTATCCATATGCCACTATTCTACGT 60.404 42.308 0.00 0.00 0.00 3.57
5842 7811 5.971792 CGTATCCATATGCCACTATTCTACG 59.028 44.000 0.00 0.00 0.00 3.51
5843 7812 6.096423 TCCGTATCCATATGCCACTATTCTAC 59.904 42.308 0.00 0.00 0.00 2.59
5844 7813 6.192044 TCCGTATCCATATGCCACTATTCTA 58.808 40.000 0.00 0.00 0.00 2.10
5845 7814 5.023452 TCCGTATCCATATGCCACTATTCT 58.977 41.667 0.00 0.00 0.00 2.40
5846 7815 5.339008 TCCGTATCCATATGCCACTATTC 57.661 43.478 0.00 0.00 0.00 1.75
5847 7816 5.674525 CATCCGTATCCATATGCCACTATT 58.325 41.667 0.00 0.00 0.00 1.73
5848 7817 4.443457 GCATCCGTATCCATATGCCACTAT 60.443 45.833 0.00 0.00 39.01 2.12
5849 7818 3.118775 GCATCCGTATCCATATGCCACTA 60.119 47.826 0.00 0.00 39.01 2.74
5850 7819 2.355108 GCATCCGTATCCATATGCCACT 60.355 50.000 0.00 0.00 39.01 4.00
5851 7820 2.009774 GCATCCGTATCCATATGCCAC 58.990 52.381 0.00 0.00 39.01 5.01
5852 7821 2.401583 GCATCCGTATCCATATGCCA 57.598 50.000 0.00 0.00 39.01 4.92
5854 7823 1.668419 GGGCATCCGTATCCATATGC 58.332 55.000 0.00 0.00 43.13 3.14
5855 7824 1.559219 TGGGGCATCCGTATCCATATG 59.441 52.381 0.00 0.00 38.76 1.78
5856 7825 1.965414 TGGGGCATCCGTATCCATAT 58.035 50.000 0.00 0.00 38.76 1.78
5857 7826 1.559219 CATGGGGCATCCGTATCCATA 59.441 52.381 0.00 0.00 36.55 2.74
5858 7827 0.329261 CATGGGGCATCCGTATCCAT 59.671 55.000 0.00 0.00 38.61 3.41
5859 7828 0.766288 TCATGGGGCATCCGTATCCA 60.766 55.000 0.00 0.00 38.76 3.41
5860 7829 0.321653 GTCATGGGGCATCCGTATCC 60.322 60.000 0.00 0.00 38.76 2.59
5861 7830 0.396435 TGTCATGGGGCATCCGTATC 59.604 55.000 0.00 0.00 38.76 2.24
5862 7831 0.843309 TTGTCATGGGGCATCCGTAT 59.157 50.000 0.00 0.00 38.76 3.06
5863 7832 0.621082 TTTGTCATGGGGCATCCGTA 59.379 50.000 0.00 0.00 38.76 4.02
5864 7833 0.251564 TTTTGTCATGGGGCATCCGT 60.252 50.000 0.00 0.00 38.76 4.69
5865 7834 0.894141 TTTTTGTCATGGGGCATCCG 59.106 50.000 0.00 0.00 38.76 4.18
5891 7860 9.561069 GGAGAATAAATCAACATAGAAGCCTTA 57.439 33.333 0.00 0.00 0.00 2.69
5892 7861 7.503902 GGGAGAATAAATCAACATAGAAGCCTT 59.496 37.037 0.00 0.00 0.00 4.35
5893 7862 7.001073 GGGAGAATAAATCAACATAGAAGCCT 58.999 38.462 0.00 0.00 0.00 4.58
5894 7863 7.001073 AGGGAGAATAAATCAACATAGAAGCC 58.999 38.462 0.00 0.00 0.00 4.35
5895 7864 9.561069 TTAGGGAGAATAAATCAACATAGAAGC 57.439 33.333 0.00 0.00 0.00 3.86
5898 7867 9.507329 GCATTAGGGAGAATAAATCAACATAGA 57.493 33.333 0.00 0.00 0.00 1.98
5899 7868 9.288576 TGCATTAGGGAGAATAAATCAACATAG 57.711 33.333 0.00 0.00 0.00 2.23
5900 7869 9.639563 TTGCATTAGGGAGAATAAATCAACATA 57.360 29.630 0.00 0.00 0.00 2.29
5901 7870 8.537728 TTGCATTAGGGAGAATAAATCAACAT 57.462 30.769 0.00 0.00 0.00 2.71
5902 7871 7.416664 GCTTGCATTAGGGAGAATAAATCAACA 60.417 37.037 0.00 0.00 0.00 3.33
5903 7872 6.920210 GCTTGCATTAGGGAGAATAAATCAAC 59.080 38.462 0.00 0.00 0.00 3.18
5904 7873 6.835488 AGCTTGCATTAGGGAGAATAAATCAA 59.165 34.615 0.00 0.00 0.00 2.57
5905 7874 6.367983 AGCTTGCATTAGGGAGAATAAATCA 58.632 36.000 0.00 0.00 0.00 2.57
5906 7875 6.890979 AGCTTGCATTAGGGAGAATAAATC 57.109 37.500 0.00 0.00 0.00 2.17
5907 7876 7.521669 AGTAGCTTGCATTAGGGAGAATAAAT 58.478 34.615 0.00 0.00 0.00 1.40
5908 7877 6.900194 AGTAGCTTGCATTAGGGAGAATAAA 58.100 36.000 0.00 0.00 0.00 1.40
5909 7878 6.500589 AGTAGCTTGCATTAGGGAGAATAA 57.499 37.500 0.00 0.00 0.00 1.40
5910 7879 6.782988 AGTAGTAGCTTGCATTAGGGAGAATA 59.217 38.462 0.00 0.00 0.00 1.75
5911 7880 5.604650 AGTAGTAGCTTGCATTAGGGAGAAT 59.395 40.000 0.00 0.00 0.00 2.40
5912 7881 4.962995 AGTAGTAGCTTGCATTAGGGAGAA 59.037 41.667 0.00 0.00 0.00 2.87
5913 7882 4.547671 AGTAGTAGCTTGCATTAGGGAGA 58.452 43.478 0.00 0.00 0.00 3.71
5914 7883 4.946478 AGTAGTAGCTTGCATTAGGGAG 57.054 45.455 0.00 0.00 0.00 4.30
5915 7884 5.302059 CACTAGTAGTAGCTTGCATTAGGGA 59.698 44.000 1.57 0.00 0.00 4.20
5916 7885 5.069251 ACACTAGTAGTAGCTTGCATTAGGG 59.931 44.000 1.57 0.00 0.00 3.53
5917 7886 5.980116 CACACTAGTAGTAGCTTGCATTAGG 59.020 44.000 1.57 0.00 0.00 2.69
5918 7887 5.460419 GCACACTAGTAGTAGCTTGCATTAG 59.540 44.000 19.33 0.00 37.32 1.73
5919 7888 5.348986 GCACACTAGTAGTAGCTTGCATTA 58.651 41.667 19.33 0.00 37.32 1.90
5920 7889 4.184629 GCACACTAGTAGTAGCTTGCATT 58.815 43.478 19.33 0.00 37.32 3.56
5921 7890 3.430929 GGCACACTAGTAGTAGCTTGCAT 60.431 47.826 23.04 0.00 38.37 3.96
5922 7891 2.094182 GGCACACTAGTAGTAGCTTGCA 60.094 50.000 23.04 0.00 38.37 4.08
5923 7892 2.166664 AGGCACACTAGTAGTAGCTTGC 59.833 50.000 20.12 17.27 36.92 4.01
5924 7893 3.444034 TGAGGCACACTAGTAGTAGCTTG 59.556 47.826 20.12 10.01 31.58 4.01
5925 7894 3.698289 TGAGGCACACTAGTAGTAGCTT 58.302 45.455 20.12 15.50 31.58 3.74
5926 7895 3.367646 TGAGGCACACTAGTAGTAGCT 57.632 47.619 20.12 10.65 31.58 3.32
5927 7896 3.632604 TGATGAGGCACACTAGTAGTAGC 59.367 47.826 15.18 15.18 0.00 3.58
5928 7897 5.836821 TTGATGAGGCACACTAGTAGTAG 57.163 43.478 1.57 2.87 0.00 2.57
5929 7898 5.949952 TCTTTGATGAGGCACACTAGTAGTA 59.050 40.000 1.57 0.00 0.00 1.82
5930 7899 4.772624 TCTTTGATGAGGCACACTAGTAGT 59.227 41.667 0.00 0.00 0.00 2.73
5931 7900 5.330455 TCTTTGATGAGGCACACTAGTAG 57.670 43.478 0.00 0.00 0.00 2.57
5932 7901 5.738619 TTCTTTGATGAGGCACACTAGTA 57.261 39.130 0.00 0.00 0.00 1.82
5933 7902 4.623932 TTCTTTGATGAGGCACACTAGT 57.376 40.909 0.00 0.00 0.00 2.57
5934 7903 7.044181 TCTTATTCTTTGATGAGGCACACTAG 58.956 38.462 0.00 0.00 0.00 2.57
5935 7904 6.946340 TCTTATTCTTTGATGAGGCACACTA 58.054 36.000 0.00 0.00 0.00 2.74
5936 7905 5.809001 TCTTATTCTTTGATGAGGCACACT 58.191 37.500 0.00 0.00 0.00 3.55
5937 7906 6.150140 ACTTCTTATTCTTTGATGAGGCACAC 59.850 38.462 0.00 0.00 0.00 3.82
5938 7907 6.149973 CACTTCTTATTCTTTGATGAGGCACA 59.850 38.462 0.00 0.00 0.00 4.57
5939 7908 6.372659 TCACTTCTTATTCTTTGATGAGGCAC 59.627 38.462 0.00 0.00 0.00 5.01
5940 7909 6.372659 GTCACTTCTTATTCTTTGATGAGGCA 59.627 38.462 0.00 0.00 0.00 4.75
5941 7910 6.372659 TGTCACTTCTTATTCTTTGATGAGGC 59.627 38.462 0.00 0.00 0.00 4.70
5942 7911 7.605691 AGTGTCACTTCTTATTCTTTGATGAGG 59.394 37.037 0.00 0.00 0.00 3.86
5943 7912 8.545229 AGTGTCACTTCTTATTCTTTGATGAG 57.455 34.615 0.00 0.00 0.00 2.90
5944 7913 8.908786 AAGTGTCACTTCTTATTCTTTGATGA 57.091 30.769 12.62 0.00 31.77 2.92
5950 7919 9.694137 GTGTAGTAAGTGTCACTTCTTATTCTT 57.306 33.333 21.40 0.00 39.51 2.52
5951 7920 8.857098 TGTGTAGTAAGTGTCACTTCTTATTCT 58.143 33.333 21.40 12.83 39.51 2.40
5952 7921 9.640963 ATGTGTAGTAAGTGTCACTTCTTATTC 57.359 33.333 21.40 10.24 39.51 1.75
5953 7922 9.424319 CATGTGTAGTAAGTGTCACTTCTTATT 57.576 33.333 21.40 4.55 39.51 1.40
5954 7923 7.545965 GCATGTGTAGTAAGTGTCACTTCTTAT 59.454 37.037 21.40 8.88 39.51 1.73
5955 7924 6.866770 GCATGTGTAGTAAGTGTCACTTCTTA 59.133 38.462 21.40 12.17 39.51 2.10
5956 7925 5.696724 GCATGTGTAGTAAGTGTCACTTCTT 59.303 40.000 21.40 13.11 39.51 2.52
5957 7926 5.221441 TGCATGTGTAGTAAGTGTCACTTCT 60.221 40.000 21.40 18.49 39.51 2.85
5958 7927 4.988540 TGCATGTGTAGTAAGTGTCACTTC 59.011 41.667 21.40 12.96 39.51 3.01
5959 7928 4.956085 TGCATGTGTAGTAAGTGTCACTT 58.044 39.130 21.48 21.48 41.97 3.16
5960 7929 4.600692 TGCATGTGTAGTAAGTGTCACT 57.399 40.909 0.00 0.00 0.00 3.41
5961 7930 4.330074 GGATGCATGTGTAGTAAGTGTCAC 59.670 45.833 2.46 0.00 0.00 3.67
5962 7931 4.503910 GGATGCATGTGTAGTAAGTGTCA 58.496 43.478 2.46 0.00 0.00 3.58
5963 7932 3.871594 GGGATGCATGTGTAGTAAGTGTC 59.128 47.826 2.46 0.00 0.00 3.67
5964 7933 3.519510 AGGGATGCATGTGTAGTAAGTGT 59.480 43.478 2.46 0.00 0.00 3.55
5965 7934 4.142609 AGGGATGCATGTGTAGTAAGTG 57.857 45.455 2.46 0.00 0.00 3.16
5966 7935 4.471386 AGAAGGGATGCATGTGTAGTAAGT 59.529 41.667 2.46 0.00 0.00 2.24
5967 7936 5.028549 AGAAGGGATGCATGTGTAGTAAG 57.971 43.478 2.46 0.00 0.00 2.34
5968 7937 4.716784 AGAGAAGGGATGCATGTGTAGTAA 59.283 41.667 2.46 0.00 0.00 2.24
5969 7938 4.290093 AGAGAAGGGATGCATGTGTAGTA 58.710 43.478 2.46 0.00 0.00 1.82
5970 7939 3.110705 AGAGAAGGGATGCATGTGTAGT 58.889 45.455 2.46 0.00 0.00 2.73
5971 7940 3.834489 AGAGAAGGGATGCATGTGTAG 57.166 47.619 2.46 0.00 0.00 2.74
5972 7941 3.118261 GGAAGAGAAGGGATGCATGTGTA 60.118 47.826 2.46 0.00 0.00 2.90
5973 7942 2.356535 GGAAGAGAAGGGATGCATGTGT 60.357 50.000 2.46 0.00 0.00 3.72
5974 7943 2.295885 GGAAGAGAAGGGATGCATGTG 58.704 52.381 2.46 0.00 0.00 3.21
5975 7944 1.213926 GGGAAGAGAAGGGATGCATGT 59.786 52.381 2.46 0.00 0.00 3.21
5976 7945 1.493871 AGGGAAGAGAAGGGATGCATG 59.506 52.381 2.46 0.00 0.00 4.06
5977 7946 1.904440 AGGGAAGAGAAGGGATGCAT 58.096 50.000 0.00 0.00 0.00 3.96
5978 7947 1.673767 AAGGGAAGAGAAGGGATGCA 58.326 50.000 0.00 0.00 0.00 3.96
5979 7948 2.816777 AAAGGGAAGAGAAGGGATGC 57.183 50.000 0.00 0.00 0.00 3.91
5980 7949 5.443230 AGTTAAAGGGAAGAGAAGGGATG 57.557 43.478 0.00 0.00 0.00 3.51
5981 7950 6.470456 AAAGTTAAAGGGAAGAGAAGGGAT 57.530 37.500 0.00 0.00 0.00 3.85
5982 7951 5.924769 AAAGTTAAAGGGAAGAGAAGGGA 57.075 39.130 0.00 0.00 0.00 4.20
5983 7952 6.307776 AGAAAAGTTAAAGGGAAGAGAAGGG 58.692 40.000 0.00 0.00 0.00 3.95
5984 7953 8.784994 GTTAGAAAAGTTAAAGGGAAGAGAAGG 58.215 37.037 0.00 0.00 0.00 3.46
5985 7954 9.562408 AGTTAGAAAAGTTAAAGGGAAGAGAAG 57.438 33.333 0.00 0.00 0.00 2.85
5986 7955 9.916360 AAGTTAGAAAAGTTAAAGGGAAGAGAA 57.084 29.630 0.00 0.00 0.00 2.87
5987 7956 9.916360 AAAGTTAGAAAAGTTAAAGGGAAGAGA 57.084 29.630 0.00 0.00 0.00 3.10
5992 7961 9.357161 TGCATAAAGTTAGAAAAGTTAAAGGGA 57.643 29.630 0.00 0.00 0.00 4.20
5993 7962 9.406828 GTGCATAAAGTTAGAAAAGTTAAAGGG 57.593 33.333 0.00 0.00 0.00 3.95
5994 7963 9.406828 GGTGCATAAAGTTAGAAAAGTTAAAGG 57.593 33.333 0.00 0.00 0.00 3.11
5995 7964 9.113876 CGGTGCATAAAGTTAGAAAAGTTAAAG 57.886 33.333 0.00 0.00 0.00 1.85
5996 7965 8.077386 CCGGTGCATAAAGTTAGAAAAGTTAAA 58.923 33.333 0.00 0.00 0.00 1.52
5997 7966 7.444792 TCCGGTGCATAAAGTTAGAAAAGTTAA 59.555 33.333 0.00 0.00 0.00 2.01
5998 7967 6.935771 TCCGGTGCATAAAGTTAGAAAAGTTA 59.064 34.615 0.00 0.00 0.00 2.24
5999 7968 5.766174 TCCGGTGCATAAAGTTAGAAAAGTT 59.234 36.000 0.00 0.00 0.00 2.66
6000 7969 5.180680 GTCCGGTGCATAAAGTTAGAAAAGT 59.819 40.000 0.00 0.00 0.00 2.66
6001 7970 5.391629 GGTCCGGTGCATAAAGTTAGAAAAG 60.392 44.000 0.00 0.00 0.00 2.27
6002 7971 4.456566 GGTCCGGTGCATAAAGTTAGAAAA 59.543 41.667 0.00 0.00 0.00 2.29
6003 7972 4.004982 GGTCCGGTGCATAAAGTTAGAAA 58.995 43.478 0.00 0.00 0.00 2.52
6004 7973 3.008157 TGGTCCGGTGCATAAAGTTAGAA 59.992 43.478 0.00 0.00 0.00 2.10
6005 7974 2.568062 TGGTCCGGTGCATAAAGTTAGA 59.432 45.455 0.00 0.00 0.00 2.10
6006 7975 2.980568 TGGTCCGGTGCATAAAGTTAG 58.019 47.619 0.00 0.00 0.00 2.34
6007 7976 3.637911 ATGGTCCGGTGCATAAAGTTA 57.362 42.857 0.00 0.00 0.00 2.24
6008 7977 2.507407 ATGGTCCGGTGCATAAAGTT 57.493 45.000 0.00 0.00 0.00 2.66
6009 7978 3.857157 ATATGGTCCGGTGCATAAAGT 57.143 42.857 0.00 0.00 0.00 2.66
6010 7979 5.514274 AAAATATGGTCCGGTGCATAAAG 57.486 39.130 0.00 0.00 0.00 1.85
6011 7980 5.923733 AAAAATATGGTCCGGTGCATAAA 57.076 34.783 0.00 0.00 0.00 1.40
6030 7999 3.086282 GGCGGGTATTTGGAGAGAAAAA 58.914 45.455 0.00 0.00 0.00 1.94
6031 8000 2.307686 AGGCGGGTATTTGGAGAGAAAA 59.692 45.455 0.00 0.00 0.00 2.29
6032 8001 1.913419 AGGCGGGTATTTGGAGAGAAA 59.087 47.619 0.00 0.00 0.00 2.52
6033 8002 1.485066 GAGGCGGGTATTTGGAGAGAA 59.515 52.381 0.00 0.00 0.00 2.87
6034 8003 1.120530 GAGGCGGGTATTTGGAGAGA 58.879 55.000 0.00 0.00 0.00 3.10
6035 8004 0.106894 GGAGGCGGGTATTTGGAGAG 59.893 60.000 0.00 0.00 0.00 3.20
6036 8005 0.326238 AGGAGGCGGGTATTTGGAGA 60.326 55.000 0.00 0.00 0.00 3.71
6037 8006 1.070289 GTAGGAGGCGGGTATTTGGAG 59.930 57.143 0.00 0.00 0.00 3.86
6038 8007 1.125633 GTAGGAGGCGGGTATTTGGA 58.874 55.000 0.00 0.00 0.00 3.53
6039 8008 0.834612 TGTAGGAGGCGGGTATTTGG 59.165 55.000 0.00 0.00 0.00 3.28
6040 8009 1.760613 TCTGTAGGAGGCGGGTATTTG 59.239 52.381 0.00 0.00 0.00 2.32
6041 8010 2.040178 CTCTGTAGGAGGCGGGTATTT 58.960 52.381 0.00 0.00 38.35 1.40
6042 8011 1.705873 CTCTGTAGGAGGCGGGTATT 58.294 55.000 0.00 0.00 38.35 1.89
6043 8012 3.441241 CTCTGTAGGAGGCGGGTAT 57.559 57.895 0.00 0.00 38.35 2.73
6053 8022 1.691434 GGAAGCAGGATCCTCTGTAGG 59.309 57.143 12.69 0.00 45.21 3.18
6054 8023 1.691434 GGGAAGCAGGATCCTCTGTAG 59.309 57.143 12.69 0.73 37.14 2.74
6055 8024 1.692762 GGGGAAGCAGGATCCTCTGTA 60.693 57.143 12.69 0.00 34.40 2.74
6056 8025 0.985490 GGGGAAGCAGGATCCTCTGT 60.985 60.000 12.69 0.00 34.40 3.41
6057 8026 0.984961 TGGGGAAGCAGGATCCTCTG 60.985 60.000 12.69 3.58 38.35 3.35
6058 8027 0.029267 ATGGGGAAGCAGGATCCTCT 60.029 55.000 12.69 9.57 38.35 3.69
6059 8028 0.399833 GATGGGGAAGCAGGATCCTC 59.600 60.000 12.69 7.20 37.99 3.71
6060 8029 1.064824 GGATGGGGAAGCAGGATCCT 61.065 60.000 9.02 9.02 37.14 3.24
6061 8030 1.458045 GGATGGGGAAGCAGGATCC 59.542 63.158 2.48 2.48 36.16 3.36
6062 8031 1.072159 CGGATGGGGAAGCAGGATC 59.928 63.158 0.00 0.00 0.00 3.36
6063 8032 0.988145 TTCGGATGGGGAAGCAGGAT 60.988 55.000 0.00 0.00 0.00 3.24
6064 8033 1.615124 TTCGGATGGGGAAGCAGGA 60.615 57.895 0.00 0.00 0.00 3.86
6065 8034 1.452108 GTTCGGATGGGGAAGCAGG 60.452 63.158 0.00 0.00 0.00 4.85
6066 8035 1.452108 GGTTCGGATGGGGAAGCAG 60.452 63.158 0.00 0.00 40.59 4.24
6067 8036 0.619255 TAGGTTCGGATGGGGAAGCA 60.619 55.000 6.51 0.00 42.68 3.91
6068 8037 0.179054 GTAGGTTCGGATGGGGAAGC 60.179 60.000 0.00 0.00 41.06 3.86
6069 8038 1.497161 AGTAGGTTCGGATGGGGAAG 58.503 55.000 0.00 0.00 0.00 3.46
6070 8039 1.961133 AAGTAGGTTCGGATGGGGAA 58.039 50.000 0.00 0.00 0.00 3.97
6071 8040 1.961133 AAAGTAGGTTCGGATGGGGA 58.039 50.000 0.00 0.00 0.00 4.81
6072 8041 2.801077 AAAAGTAGGTTCGGATGGGG 57.199 50.000 0.00 0.00 0.00 4.96
6073 8042 5.190677 ACATAAAAAGTAGGTTCGGATGGG 58.809 41.667 0.00 0.00 0.00 4.00
6074 8043 6.753107 AACATAAAAAGTAGGTTCGGATGG 57.247 37.500 0.00 0.00 0.00 3.51
6075 8044 8.557029 GGATAACATAAAAAGTAGGTTCGGATG 58.443 37.037 0.00 0.00 0.00 3.51
6076 8045 7.440255 CGGATAACATAAAAAGTAGGTTCGGAT 59.560 37.037 0.00 0.00 0.00 4.18
6077 8046 6.757947 CGGATAACATAAAAAGTAGGTTCGGA 59.242 38.462 0.00 0.00 0.00 4.55
6078 8047 6.757947 TCGGATAACATAAAAAGTAGGTTCGG 59.242 38.462 0.00 0.00 0.00 4.30
6079 8048 7.760131 TCGGATAACATAAAAAGTAGGTTCG 57.240 36.000 0.00 0.00 0.00 3.95
6080 8049 8.393366 GGTTCGGATAACATAAAAAGTAGGTTC 58.607 37.037 0.00 0.00 0.00 3.62
6081 8050 8.105197 AGGTTCGGATAACATAAAAAGTAGGTT 58.895 33.333 0.00 0.00 0.00 3.50
6082 8051 7.627311 AGGTTCGGATAACATAAAAAGTAGGT 58.373 34.615 0.00 0.00 0.00 3.08
6083 8052 9.038803 GTAGGTTCGGATAACATAAAAAGTAGG 57.961 37.037 0.00 0.00 0.00 3.18
6084 8053 9.590451 TGTAGGTTCGGATAACATAAAAAGTAG 57.410 33.333 0.00 0.00 0.00 2.57
6086 8055 8.889717 CATGTAGGTTCGGATAACATAAAAAGT 58.110 33.333 0.00 0.00 0.00 2.66
6087 8056 8.342634 CCATGTAGGTTCGGATAACATAAAAAG 58.657 37.037 0.00 0.00 0.00 2.27
6088 8057 7.201750 GCCATGTAGGTTCGGATAACATAAAAA 60.202 37.037 0.00 0.00 40.61 1.94
6089 8058 6.261381 GCCATGTAGGTTCGGATAACATAAAA 59.739 38.462 0.00 0.00 40.61 1.52
6090 8059 5.761234 GCCATGTAGGTTCGGATAACATAAA 59.239 40.000 0.00 0.00 40.61 1.40
6091 8060 5.163290 TGCCATGTAGGTTCGGATAACATAA 60.163 40.000 0.00 0.00 40.61 1.90
6092 8061 4.345547 TGCCATGTAGGTTCGGATAACATA 59.654 41.667 0.00 0.00 40.61 2.29
6093 8062 3.135712 TGCCATGTAGGTTCGGATAACAT 59.864 43.478 0.00 0.00 40.61 2.71
6094 8063 2.502130 TGCCATGTAGGTTCGGATAACA 59.498 45.455 0.00 0.00 40.61 2.41
6095 8064 3.188159 TGCCATGTAGGTTCGGATAAC 57.812 47.619 0.00 0.00 40.61 1.89
6096 8065 3.135712 ACATGCCATGTAGGTTCGGATAA 59.864 43.478 8.96 0.00 42.78 1.75
6097 8066 2.703536 ACATGCCATGTAGGTTCGGATA 59.296 45.455 8.96 0.00 42.78 2.59
6098 8067 1.490490 ACATGCCATGTAGGTTCGGAT 59.510 47.619 8.96 0.00 42.78 4.18
6099 8068 0.908910 ACATGCCATGTAGGTTCGGA 59.091 50.000 8.96 0.00 42.78 4.55
6100 8069 1.016627 CACATGCCATGTAGGTTCGG 58.983 55.000 10.53 0.00 42.70 4.30
6101 8070 1.935873 CTCACATGCCATGTAGGTTCG 59.064 52.381 10.53 0.00 42.70 3.95
6102 8071 2.292267 CCTCACATGCCATGTAGGTTC 58.708 52.381 10.53 0.00 42.70 3.62
6103 8072 1.683011 GCCTCACATGCCATGTAGGTT 60.683 52.381 22.88 0.00 42.70 3.50
6104 8073 0.107017 GCCTCACATGCCATGTAGGT 60.107 55.000 22.88 0.00 42.70 3.08
6105 8074 0.107066 TGCCTCACATGCCATGTAGG 60.107 55.000 20.19 20.19 42.70 3.18
6106 8075 1.878088 GATGCCTCACATGCCATGTAG 59.122 52.381 10.53 8.38 42.70 2.74
6107 8076 1.212441 TGATGCCTCACATGCCATGTA 59.788 47.619 10.53 0.00 42.70 2.29
6108 8077 0.033894 TGATGCCTCACATGCCATGT 60.034 50.000 4.03 4.03 46.22 3.21
6109 8078 2.801859 TGATGCCTCACATGCCATG 58.198 52.632 2.40 2.40 39.84 3.66
6118 8087 3.016971 CCCCAGGGTGATGCCTCA 61.017 66.667 4.22 0.00 37.43 3.86
6119 8088 4.512914 GCCCCAGGGTGATGCCTC 62.513 72.222 4.22 0.00 37.65 4.70
6120 8089 2.940421 ATAGCCCCAGGGTGATGCCT 62.940 60.000 4.22 0.00 37.65 4.75
6121 8090 2.464403 ATAGCCCCAGGGTGATGCC 61.464 63.158 4.22 0.00 37.65 4.40
6122 8091 1.228367 CATAGCCCCAGGGTGATGC 60.228 63.158 4.22 0.00 37.65 3.91
6123 8092 1.228367 GCATAGCCCCAGGGTGATG 60.228 63.158 4.22 9.26 37.65 3.07
6124 8093 1.070127 ATGCATAGCCCCAGGGTGAT 61.070 55.000 4.22 0.00 37.65 3.06
6125 8094 1.288508 AATGCATAGCCCCAGGGTGA 61.289 55.000 4.22 0.00 37.65 4.02
6126 8095 1.111116 CAATGCATAGCCCCAGGGTG 61.111 60.000 4.22 0.00 37.65 4.61
6127 8096 1.231068 CAATGCATAGCCCCAGGGT 59.769 57.895 4.22 0.00 37.65 4.34
6128 8097 1.532316 CCAATGCATAGCCCCAGGG 60.532 63.158 0.00 0.00 38.57 4.45
6129 8098 2.205152 GCCAATGCATAGCCCCAGG 61.205 63.158 0.00 0.00 37.47 4.45
6130 8099 2.205152 GGCCAATGCATAGCCCCAG 61.205 63.158 23.94 0.85 41.00 4.45
6131 8100 2.123338 GGCCAATGCATAGCCCCA 60.123 61.111 23.94 0.00 41.00 4.96
6132 8101 1.534717 ATGGCCAATGCATAGCCCC 60.535 57.895 28.68 15.48 46.55 5.80
6133 8102 1.669440 CATGGCCAATGCATAGCCC 59.331 57.895 28.68 16.97 46.55 5.19
6152 8121 2.669569 CGATGGGCGCCATTAGGG 60.670 66.667 30.85 7.97 45.26 3.53
6153 8122 2.111043 ACGATGGGCGCCATTAGG 59.889 61.111 30.85 15.26 45.26 2.69
6180 8149 1.037030 CCGGCAACAACTATGGGCAT 61.037 55.000 0.00 0.00 33.97 4.40
6187 8156 1.333177 AAAATGGCCGGCAACAACTA 58.667 45.000 30.85 5.05 0.00 2.24
6216 8185 1.939934 TCTTGACAGAAAACGGTGCAG 59.060 47.619 0.00 0.00 0.00 4.41
6233 8202 1.546323 CCTTGTGTGCCAGGACATCTT 60.546 52.381 0.00 0.00 0.00 2.40
6244 8213 2.289565 GGTTAGATAGGCCTTGTGTGC 58.710 52.381 12.58 0.00 0.00 4.57
6336 8306 2.160721 AAAGGCCGAGGACAGATCTA 57.839 50.000 0.00 0.00 0.00 1.98
6337 8307 1.280457 AAAAGGCCGAGGACAGATCT 58.720 50.000 0.00 0.00 0.00 2.75
6338 8308 2.010497 GAAAAAGGCCGAGGACAGATC 58.990 52.381 0.00 0.00 0.00 2.75
6340 8310 1.056660 AGAAAAAGGCCGAGGACAGA 58.943 50.000 0.00 0.00 0.00 3.41
6341 8311 2.762535 TAGAAAAAGGCCGAGGACAG 57.237 50.000 0.00 0.00 0.00 3.51
6343 8313 1.671328 GCATAGAAAAAGGCCGAGGAC 59.329 52.381 0.00 0.00 0.00 3.85
6385 8357 1.342174 GGAACCACGCGATTCCCTATA 59.658 52.381 22.53 0.00 38.81 1.31
6448 8612 3.152341 CCTTGTCATGAGCTTCAAGGTT 58.848 45.455 24.67 0.00 46.63 3.50
6453 8617 2.235650 CTCCTCCTTGTCATGAGCTTCA 59.764 50.000 0.00 0.00 0.00 3.02
6467 8631 1.938596 TCAGCCTCCTCCTCCTCCT 60.939 63.158 0.00 0.00 0.00 3.69
6470 8634 1.305718 GTGTCAGCCTCCTCCTCCT 60.306 63.158 0.00 0.00 0.00 3.69
6471 8635 2.363172 GGTGTCAGCCTCCTCCTCC 61.363 68.421 0.00 0.00 0.00 4.30
6473 8637 1.152030 TTGGTGTCAGCCTCCTCCT 60.152 57.895 0.00 0.00 0.00 3.69
6474 8638 1.003233 GTTGGTGTCAGCCTCCTCC 60.003 63.158 0.00 0.00 0.00 4.30
6475 8639 0.326264 ATGTTGGTGTCAGCCTCCTC 59.674 55.000 0.00 0.00 0.00 3.71
6476 8640 0.773644 AATGTTGGTGTCAGCCTCCT 59.226 50.000 0.00 0.00 0.00 3.69
6477 8641 2.489938 TAATGTTGGTGTCAGCCTCC 57.510 50.000 0.00 0.00 0.00 4.30
6478 8642 2.684881 CCATAATGTTGGTGTCAGCCTC 59.315 50.000 0.00 0.00 31.74 4.70
6479 8643 2.726821 CCATAATGTTGGTGTCAGCCT 58.273 47.619 0.00 0.00 31.74 4.58
6480 8644 1.134946 GCCATAATGTTGGTGTCAGCC 59.865 52.381 0.00 0.00 39.11 4.85
6481 8645 1.134946 GGCCATAATGTTGGTGTCAGC 59.865 52.381 0.00 0.00 39.11 4.26
6482 8646 2.684881 GAGGCCATAATGTTGGTGTCAG 59.315 50.000 5.01 0.00 39.11 3.51
6483 8647 2.722094 GAGGCCATAATGTTGGTGTCA 58.278 47.619 5.01 0.00 39.11 3.58
6484 8648 1.670811 CGAGGCCATAATGTTGGTGTC 59.329 52.381 5.01 0.00 39.11 3.67
6485 8649 1.004277 ACGAGGCCATAATGTTGGTGT 59.996 47.619 5.01 0.00 39.11 4.16
6486 8650 1.670811 GACGAGGCCATAATGTTGGTG 59.329 52.381 5.01 0.00 39.11 4.17
6487 8651 1.742411 CGACGAGGCCATAATGTTGGT 60.742 52.381 5.01 0.00 39.11 3.67
6488 8652 0.937304 CGACGAGGCCATAATGTTGG 59.063 55.000 5.01 0.00 39.94 3.77
6489 8653 1.934589 TCGACGAGGCCATAATGTTG 58.065 50.000 5.01 0.00 0.00 3.33
6490 8654 2.093658 ACTTCGACGAGGCCATAATGTT 60.094 45.455 5.01 0.00 0.00 2.71
6491 8655 1.480954 ACTTCGACGAGGCCATAATGT 59.519 47.619 5.01 0.00 0.00 2.71
6492 8656 2.128035 GACTTCGACGAGGCCATAATG 58.872 52.381 5.01 0.00 0.00 1.90
6493 8657 1.754803 TGACTTCGACGAGGCCATAAT 59.245 47.619 5.01 0.00 0.00 1.28
6494 8658 1.179152 TGACTTCGACGAGGCCATAA 58.821 50.000 5.01 0.00 0.00 1.90
6495 8659 1.179152 TTGACTTCGACGAGGCCATA 58.821 50.000 5.01 0.00 0.00 2.74
6496 8660 0.320374 TTTGACTTCGACGAGGCCAT 59.680 50.000 5.01 0.00 0.00 4.40
6497 8661 0.319555 CTTTGACTTCGACGAGGCCA 60.320 55.000 5.01 0.00 0.00 5.36
6498 8662 1.014564 CCTTTGACTTCGACGAGGCC 61.015 60.000 6.92 0.00 0.00 5.19
6499 8663 0.038526 TCCTTTGACTTCGACGAGGC 60.039 55.000 6.92 0.03 0.00 4.70
6500 8664 1.699343 GTCCTTTGACTTCGACGAGG 58.301 55.000 5.30 5.30 38.53 4.63
6504 8668 1.669211 CCCTCGTCCTTTGACTTCGAC 60.669 57.143 0.00 0.00 39.47 4.20
6505 8669 0.601558 CCCTCGTCCTTTGACTTCGA 59.398 55.000 0.00 0.00 39.47 3.71
6506 8670 0.317479 ACCCTCGTCCTTTGACTTCG 59.683 55.000 0.00 0.00 39.47 3.79
6507 8671 2.081725 GACCCTCGTCCTTTGACTTC 57.918 55.000 0.00 0.00 39.47 3.01
6557 8768 0.667487 ACACGATGTTGGCTCGACAG 60.667 55.000 0.61 0.00 39.38 3.51
6623 8834 0.030101 CTCATCGAAGAGAGCGGGAC 59.970 60.000 12.23 0.00 43.63 4.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.