Multiple sequence alignment - TraesCS4D01G183400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G183400 chr4D 100.000 9466 0 0 1 9466 320601482 320592017 0.000000e+00 17481.0
1 TraesCS4D01G183400 chr4D 95.417 240 8 2 9228 9466 507403707 507403470 6.940000e-101 379.0
2 TraesCS4D01G183400 chr4D 94.894 235 12 0 9232 9466 28428077 28428311 1.500000e-97 368.0
3 TraesCS4D01G183400 chr4D 96.667 150 5 0 588 737 35449206 35449057 5.680000e-62 250.0
4 TraesCS4D01G183400 chr4D 96.053 152 4 2 588 737 447293812 447293661 7.340000e-61 246.0
5 TraesCS4D01G183400 chr4D 95.364 151 6 1 588 737 351463646 351463796 1.230000e-58 239.0
6 TraesCS4D01G183400 chr4D 89.583 192 12 7 587 771 282407772 282407962 4.420000e-58 237.0
7 TraesCS4D01G183400 chr4D 92.157 102 7 1 7650 7750 252173803 252173702 9.910000e-30 143.0
8 TraesCS4D01G183400 chr4A 98.805 3598 31 2 736 4321 151945643 151949240 0.000000e+00 6396.0
9 TraesCS4D01G183400 chr4A 96.134 3311 93 13 4378 7675 151949267 151952555 0.000000e+00 5373.0
10 TraesCS4D01G183400 chr4A 95.920 1250 34 6 7747 8995 151952558 151953791 0.000000e+00 2010.0
11 TraesCS4D01G183400 chr4A 82.306 503 70 13 1 491 151944946 151945441 1.470000e-112 418.0
12 TraesCS4D01G183400 chr4A 96.364 55 2 0 7263 7317 594030190 594030136 3.640000e-14 91.6
13 TraesCS4D01G183400 chr4A 94.737 57 3 0 7261 7317 618462171 618462227 1.310000e-13 89.8
14 TraesCS4D01G183400 chr4A 87.500 80 6 3 7751 7828 640215077 640215000 1.310000e-13 89.8
15 TraesCS4D01G183400 chr4A 86.076 79 10 1 7748 7826 674339323 674339400 6.090000e-12 84.2
16 TraesCS4D01G183400 chr4B 96.868 2842 68 12 3316 6151 399942484 399945310 0.000000e+00 4735.0
17 TraesCS4D01G183400 chr4B 98.444 2570 31 3 736 3297 399939746 399942314 0.000000e+00 4516.0
18 TraesCS4D01G183400 chr4B 95.828 1534 49 8 6148 7675 399945432 399946956 0.000000e+00 2464.0
19 TraesCS4D01G183400 chr4B 95.926 1399 38 12 7737 9124 399947033 399948423 0.000000e+00 2250.0
20 TraesCS4D01G183400 chr4B 84.828 435 55 10 1 431 399938744 399939171 2.440000e-115 427.0
21 TraesCS4D01G183400 chr4B 89.247 93 7 1 498 587 399939666 399939758 7.770000e-21 113.0
22 TraesCS4D01G183400 chr4B 96.154 52 2 0 9187 9238 399948629 399948680 1.690000e-12 86.1
23 TraesCS4D01G183400 chr4B 94.545 55 3 0 9178 9232 399957627 399957681 1.690000e-12 86.1
24 TraesCS4D01G183400 chr4B 93.333 45 1 2 9123 9166 399948586 399948629 2.210000e-06 65.8
25 TraesCS4D01G183400 chr5D 97.458 236 6 0 9231 9466 458279016 458279251 4.120000e-108 403.0
26 TraesCS4D01G183400 chr5D 95.299 234 11 0 9232 9465 106686070 106686303 1.160000e-98 372.0
27 TraesCS4D01G183400 chr5D 96.711 152 4 1 587 737 76972626 76972475 1.580000e-62 252.0
28 TraesCS4D01G183400 chr5D 88.235 85 5 1 7319 7398 159411352 159411436 7.820000e-16 97.1
29 TraesCS4D01G183400 chr5B 94.894 235 12 0 9232 9466 686747903 686748137 1.500000e-97 368.0
30 TraesCS4D01G183400 chr5B 82.558 172 29 1 8997 9168 125830062 125830232 5.920000e-32 150.0
31 TraesCS4D01G183400 chr5B 93.617 47 3 0 8013 8059 427246178 427246224 4.740000e-08 71.3
32 TraesCS4D01G183400 chr7D 94.492 236 13 0 9231 9466 3718033 3717798 1.940000e-96 364.0
33 TraesCS4D01G183400 chr7D 94.419 215 12 0 9252 9466 417780541 417780755 1.970000e-86 331.0
34 TraesCS4D01G183400 chr7D 91.139 79 6 1 7748 7826 60438327 60438250 1.300000e-18 106.0
35 TraesCS4D01G183400 chr7D 88.889 72 8 0 7755 7826 136249816 136249745 1.310000e-13 89.8
36 TraesCS4D01G183400 chr7D 94.118 51 2 1 8007 8056 127000982 127000932 1.020000e-09 76.8
37 TraesCS4D01G183400 chr3D 94.468 235 13 0 9232 9466 375199014 375199248 6.990000e-96 363.0
38 TraesCS4D01G183400 chr3D 95.395 152 6 1 588 738 529127161 529127312 3.420000e-59 241.0
39 TraesCS4D01G183400 chr2B 93.617 235 14 1 9232 9466 382235144 382235377 5.440000e-92 350.0
40 TraesCS4D01G183400 chr2B 86.747 83 8 3 327 407 790230405 790230324 1.310000e-13 89.8
41 TraesCS4D01G183400 chr2B 90.741 54 3 2 8006 8058 584118765 584118817 4.740000e-08 71.3
42 TraesCS4D01G183400 chr3B 96.129 155 4 2 588 740 807942664 807942510 1.580000e-62 252.0
43 TraesCS4D01G183400 chr3B 94.737 95 3 2 7656 7749 372246389 372246296 7.660000e-31 147.0
44 TraesCS4D01G183400 chr3B 92.929 99 7 0 7660 7758 802995972 802996070 2.760000e-30 145.0
45 TraesCS4D01G183400 chr3B 82.482 137 20 3 272 406 787482795 787482661 6.010000e-22 117.0
46 TraesCS4D01G183400 chr3B 90.769 65 6 0 7253 7317 474402097 474402033 4.710000e-13 87.9
47 TraesCS4D01G183400 chrUn 96.026 151 5 1 588 737 64153173 64153323 2.640000e-60 244.0
48 TraesCS4D01G183400 chrUn 91.304 46 4 0 7782 7827 37398616 37398661 7.940000e-06 63.9
49 TraesCS4D01G183400 chr1A 95.395 152 6 1 587 737 378253097 378253248 3.420000e-59 241.0
50 TraesCS4D01G183400 chr5A 84.795 171 19 4 8999 9168 119864449 119864613 2.110000e-36 165.0
51 TraesCS4D01G183400 chr5A 96.296 54 2 0 7264 7317 59700798 59700851 1.310000e-13 89.8
52 TraesCS4D01G183400 chr5A 84.524 84 8 2 7319 7397 451589882 451589965 2.830000e-10 78.7
53 TraesCS4D01G183400 chr1B 96.703 91 3 0 7660 7750 181305375 181305285 1.650000e-32 152.0
54 TraesCS4D01G183400 chr1B 96.703 91 3 0 7660 7750 679324517 679324607 1.650000e-32 152.0
55 TraesCS4D01G183400 chr1B 88.235 85 4 2 7318 7396 687798616 687798700 7.820000e-16 97.1
56 TraesCS4D01G183400 chr1B 90.000 40 4 0 300 339 645407577 645407616 1.700000e-02 52.8
57 TraesCS4D01G183400 chr2D 97.701 87 2 0 7663 7749 643235823 643235909 5.920000e-32 150.0
58 TraesCS4D01G183400 chr2D 78.626 131 28 0 221 351 373654561 373654431 4.710000e-13 87.9
59 TraesCS4D01G183400 chr2D 88.000 75 5 1 7320 7390 467973825 467973899 1.690000e-12 86.1
60 TraesCS4D01G183400 chr6B 92.233 103 8 0 7654 7756 485061296 485061194 7.660000e-31 147.0
61 TraesCS4D01G183400 chr6B 89.189 111 11 1 7650 7759 48874025 48874135 4.610000e-28 137.0
62 TraesCS4D01G183400 chr6B 85.455 110 14 2 302 409 509318434 509318543 7.770000e-21 113.0
63 TraesCS4D01G183400 chr6B 87.500 72 7 2 336 406 126847821 126847751 2.190000e-11 82.4
64 TraesCS4D01G183400 chr2A 93.000 100 4 3 7658 7756 699439298 699439201 9.910000e-30 143.0
65 TraesCS4D01G183400 chr2A 79.891 184 34 3 221 402 706503077 706503259 2.140000e-26 132.0
66 TraesCS4D01G183400 chr2A 86.250 80 6 2 7321 7395 171955734 171955813 2.190000e-11 82.4
67 TraesCS4D01G183400 chr2A 87.013 77 5 1 7319 7390 582635054 582635130 2.190000e-11 82.4
68 TraesCS4D01G183400 chr2A 94.000 50 2 1 8008 8057 66844937 66844889 3.670000e-09 75.0
69 TraesCS4D01G183400 chr3A 91.026 78 7 0 7749 7826 13151627 13151550 1.300000e-18 106.0
70 TraesCS4D01G183400 chr3A 89.231 65 6 1 7253 7317 485595296 485595233 7.880000e-11 80.5
71 TraesCS4D01G183400 chr3A 89.231 65 6 1 7253 7317 485679917 485679854 7.880000e-11 80.5
72 TraesCS4D01G183400 chr3A 97.436 39 1 0 7789 7827 20020415 20020377 6.130000e-07 67.6
73 TraesCS4D01G183400 chr6A 75.789 190 43 3 221 408 204707591 204707403 1.010000e-14 93.5
74 TraesCS4D01G183400 chr6A 87.500 80 5 1 7319 7393 607845507 607845428 4.710000e-13 87.9
75 TraesCS4D01G183400 chr6A 80.000 115 21 2 266 378 77899697 77899811 6.090000e-12 84.2
76 TraesCS4D01G183400 chr1D 94.444 54 3 0 7264 7317 216718722 216718775 6.090000e-12 84.2
77 TraesCS4D01G183400 chr1D 92.000 50 2 2 8014 8062 106843113 106843161 1.710000e-07 69.4
78 TraesCS4D01G183400 chr7B 89.394 66 3 4 7763 7826 99108859 99108796 7.880000e-11 80.5
79 TraesCS4D01G183400 chr7B 95.455 44 2 0 8014 8057 450642156 450642113 4.740000e-08 71.3
80 TraesCS4D01G183400 chr7A 100.000 40 0 0 8015 8054 603130298 603130259 3.670000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G183400 chr4D 320592017 320601482 9465 True 17481.0000 17481 100.00000 1 9466 1 chr4D.!!$R3 9465
1 TraesCS4D01G183400 chr4A 151944946 151953791 8845 False 3549.2500 6396 93.29125 1 8995 4 chr4A.!!$F3 8994
2 TraesCS4D01G183400 chr4B 399938744 399948680 9936 False 1832.1125 4735 93.82850 1 9238 8 chr4B.!!$F2 9237

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
685 1165 0.033504 TGGTGCTCACGGAGTTTCTC 59.966 55.000 3.38 0.0 41.61 2.87 F
1302 1794 0.184933 AGATCGCTGCCTACCTCTCT 59.815 55.000 0.00 0.0 0.00 3.10 F
2538 3030 1.896660 GTTGACGGTGTGCCATGGT 60.897 57.895 14.67 0.0 34.09 3.55 F
2886 3378 1.410882 GCAGGAGAGGGCACTAGTAAG 59.589 57.143 0.00 0.0 0.00 2.34 F
4440 5089 2.565841 ACTTGTGCTTGGACTCTGAAC 58.434 47.619 0.00 0.0 0.00 3.18 F
5749 6398 1.481772 GTGTGGTATACCCGTGCCTTA 59.518 52.381 19.42 0.0 35.15 2.69 F
6345 7125 1.100510 TCTGTTATCTCCCGTGTCCG 58.899 55.000 0.00 0.0 0.00 4.79 F
6997 7782 1.598130 GCTGTTTGCGTCCAGGAGT 60.598 57.895 0.00 0.0 0.00 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2538 3030 2.587247 GCTGAGCCCTGTGGAGTCA 61.587 63.158 0.00 0.0 0.00 3.41 R
2736 3228 1.971505 ATGATCGTGGGTGCATCCGT 61.972 55.000 12.39 0.0 37.00 4.69 R
4440 5089 0.040958 GCCAGCTGACGTTGAAACTG 60.041 55.000 17.39 0.0 0.00 3.16 R
4581 5230 2.622942 GCAACTGTCATGAAGGGTTGAA 59.377 45.455 26.58 0.0 39.39 2.69 R
5884 6539 1.084370 GCGTCAGGTGTACATCCAGC 61.084 60.000 1.47 0.0 0.00 4.85 R
6985 7770 1.334160 TCTTTACACTCCTGGACGCA 58.666 50.000 0.00 0.0 0.00 5.24 R
7810 8615 2.119655 CACTACTCCCTCCGTCCCG 61.120 68.421 0.00 0.0 0.00 5.14 R
8870 9677 0.106708 TATGCCTGGCTCGGATGAAC 59.893 55.000 21.03 0.0 0.00 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 5.589367 ACCCTGGCATCAAATATGATAGT 57.411 39.130 0.00 0.00 44.53 2.12
79 86 8.527567 TTTAAATCCATTCAAAGCTAAAACGG 57.472 30.769 0.00 0.00 0.00 4.44
81 88 3.153919 TCCATTCAAAGCTAAAACGGCT 58.846 40.909 0.00 0.00 42.31 5.52
96 103 7.330946 GCTAAAACGGCTGGAAAATTAGATTTT 59.669 33.333 0.00 0.00 44.56 1.82
123 130 9.530129 CTAGAAAACGCGAATCCATAAATAATC 57.470 33.333 15.93 0.00 0.00 1.75
176 183 8.929827 TCCTGATGCATATGTTTATTTTGTTG 57.070 30.769 0.00 0.00 0.00 3.33
178 185 9.537192 CCTGATGCATATGTTTATTTTGTTGAT 57.463 29.630 0.00 0.00 0.00 2.57
200 209 2.857748 CGAGTATGAGCGCACATGTTTA 59.142 45.455 27.45 7.23 0.00 2.01
211 220 5.980116 AGCGCACATGTTTATTTTAACACAA 59.020 32.000 11.47 0.00 40.53 3.33
260 269 6.783892 TTACGAAGTTATTGTAAACGCCTT 57.216 33.333 0.00 0.00 37.78 4.35
263 272 5.007921 ACGAAGTTATTGTAAACGCCTTGTT 59.992 36.000 0.00 0.00 37.78 2.83
270 279 6.569179 ATTGTAAACGCCTTGTTATCAACT 57.431 33.333 0.00 0.00 40.84 3.16
287 296 3.071023 TCAACTGGAACGTCTCCTTTCAT 59.929 43.478 14.95 0.00 45.64 2.57
289 298 3.403038 ACTGGAACGTCTCCTTTCATTG 58.597 45.455 14.95 0.00 45.64 2.82
291 300 3.664107 TGGAACGTCTCCTTTCATTGAG 58.336 45.455 14.95 0.00 45.64 3.02
294 303 1.000955 ACGTCTCCTTTCATTGAGCGT 59.999 47.619 0.00 0.00 36.91 5.07
298 307 3.994392 GTCTCCTTTCATTGAGCGTGTAA 59.006 43.478 0.00 0.00 0.00 2.41
348 357 2.309528 AACGCGAGCATCAGGATTTA 57.690 45.000 15.93 0.00 33.17 1.40
393 403 5.308825 CACTGTCCTCCTAAACATTCAACT 58.691 41.667 0.00 0.00 0.00 3.16
425 435 0.454957 GCTAAGCGCACATGTGTTGG 60.455 55.000 26.01 15.51 38.92 3.77
516 993 6.743575 AATATACAAGGACAGTGCAGTTTC 57.256 37.500 0.00 0.00 0.00 2.78
529 1006 4.811557 AGTGCAGTTTCAGAAACAGAGTAC 59.188 41.667 24.85 20.96 43.79 2.73
540 1020 5.235186 CAGAAACAGAGTACAACCAGTGAAG 59.765 44.000 0.00 0.00 0.00 3.02
578 1058 2.069273 CCAGTTGGTCGTCATCTTCAC 58.931 52.381 0.00 0.00 0.00 3.18
582 1062 2.158959 GGTCGTCATCTTCACCGCG 61.159 63.158 0.00 0.00 0.00 6.46
583 1063 1.154093 GTCGTCATCTTCACCGCGA 60.154 57.895 8.23 0.00 0.00 5.87
584 1064 1.134530 GTCGTCATCTTCACCGCGAG 61.135 60.000 8.23 0.00 0.00 5.03
585 1065 1.136774 CGTCATCTTCACCGCGAGA 59.863 57.895 8.23 1.70 0.00 4.04
586 1066 0.863538 CGTCATCTTCACCGCGAGAG 60.864 60.000 8.23 0.00 0.00 3.20
587 1067 0.526524 GTCATCTTCACCGCGAGAGG 60.527 60.000 8.23 3.90 37.30 3.69
588 1068 0.679960 TCATCTTCACCGCGAGAGGA 60.680 55.000 8.23 11.88 34.73 3.71
589 1069 0.248825 CATCTTCACCGCGAGAGGAG 60.249 60.000 8.23 0.22 34.73 3.69
590 1070 1.388065 ATCTTCACCGCGAGAGGAGG 61.388 60.000 8.23 0.00 42.10 4.30
591 1071 2.035155 TTCACCGCGAGAGGAGGA 59.965 61.111 8.23 0.00 37.92 3.71
592 1072 2.272918 CTTCACCGCGAGAGGAGGAC 62.273 65.000 8.23 0.00 37.92 3.85
593 1073 4.180946 CACCGCGAGAGGAGGACG 62.181 72.222 8.23 0.00 37.92 4.79
628 1108 3.060615 CTGGGCAGCTGAGGTTGC 61.061 66.667 20.43 0.23 46.58 4.17
629 1109 3.564345 CTGGGCAGCTGAGGTTGCT 62.564 63.158 20.43 0.00 46.51 3.91
634 1114 2.033757 AGCTGAGGTTGCTGCCAG 59.966 61.111 0.00 0.00 39.56 4.85
635 1115 3.745803 GCTGAGGTTGCTGCCAGC 61.746 66.667 10.45 10.45 44.00 4.85
636 1116 3.060615 CTGAGGTTGCTGCCAGCC 61.061 66.667 15.29 0.00 41.51 4.85
637 1117 4.666253 TGAGGTTGCTGCCAGCCC 62.666 66.667 15.29 9.16 42.79 5.19
638 1118 4.666253 GAGGTTGCTGCCAGCCCA 62.666 66.667 15.29 0.00 42.79 5.36
639 1119 4.982701 AGGTTGCTGCCAGCCCAC 62.983 66.667 15.29 10.81 42.79 4.61
648 1128 4.760047 CCAGCCCACCCGAGTTCG 62.760 72.222 0.00 0.00 39.44 3.95
649 1129 3.691342 CAGCCCACCCGAGTTCGA 61.691 66.667 2.59 0.00 43.02 3.71
650 1130 3.382832 AGCCCACCCGAGTTCGAG 61.383 66.667 2.59 0.00 43.02 4.04
651 1131 3.692406 GCCCACCCGAGTTCGAGT 61.692 66.667 2.59 0.00 43.02 4.18
652 1132 2.572284 CCCACCCGAGTTCGAGTC 59.428 66.667 2.59 0.00 43.02 3.36
653 1133 2.572284 CCACCCGAGTTCGAGTCC 59.428 66.667 2.59 0.00 43.02 3.85
654 1134 2.572284 CACCCGAGTTCGAGTCCC 59.428 66.667 2.59 0.00 43.02 4.46
655 1135 3.060615 ACCCGAGTTCGAGTCCCG 61.061 66.667 2.59 0.00 43.02 5.14
656 1136 4.493747 CCCGAGTTCGAGTCCCGC 62.494 72.222 2.59 0.00 43.02 6.13
657 1137 3.744719 CCGAGTTCGAGTCCCGCA 61.745 66.667 2.59 0.00 43.02 5.69
658 1138 2.504244 CGAGTTCGAGTCCCGCAC 60.504 66.667 0.00 0.00 43.02 5.34
659 1139 2.504244 GAGTTCGAGTCCCGCACG 60.504 66.667 0.00 0.00 39.36 5.34
660 1140 3.966026 GAGTTCGAGTCCCGCACGG 62.966 68.421 1.02 1.02 39.36 4.94
661 1141 4.047059 GTTCGAGTCCCGCACGGA 62.047 66.667 11.42 0.00 38.83 4.69
668 1148 4.386951 TCCCGCACGGACACATGG 62.387 66.667 11.42 0.00 34.86 3.66
669 1149 4.697756 CCCGCACGGACACATGGT 62.698 66.667 11.42 0.00 37.50 3.55
670 1150 3.422303 CCGCACGGACACATGGTG 61.422 66.667 2.01 0.00 39.75 4.17
673 1153 3.566261 CACGGACACATGGTGCTC 58.434 61.111 0.00 0.00 36.98 4.26
674 1154 1.301637 CACGGACACATGGTGCTCA 60.302 57.895 0.00 0.00 36.98 4.26
675 1155 1.301716 ACGGACACATGGTGCTCAC 60.302 57.895 0.00 0.00 36.98 3.51
676 1156 2.382746 CGGACACATGGTGCTCACG 61.383 63.158 0.00 0.00 36.98 4.35
677 1157 2.034879 GGACACATGGTGCTCACGG 61.035 63.158 0.00 0.00 36.98 4.94
678 1158 1.005037 GACACATGGTGCTCACGGA 60.005 57.895 0.00 0.00 36.98 4.69
679 1159 1.004560 ACACATGGTGCTCACGGAG 60.005 57.895 0.00 0.00 36.98 4.63
680 1160 1.758440 ACACATGGTGCTCACGGAGT 61.758 55.000 0.00 0.00 38.24 3.85
681 1161 0.603707 CACATGGTGCTCACGGAGTT 60.604 55.000 0.00 0.00 41.61 3.01
682 1162 0.108585 ACATGGTGCTCACGGAGTTT 59.891 50.000 0.00 0.00 41.61 2.66
683 1163 0.798776 CATGGTGCTCACGGAGTTTC 59.201 55.000 3.38 0.00 41.61 2.78
684 1164 0.687354 ATGGTGCTCACGGAGTTTCT 59.313 50.000 3.38 0.00 41.61 2.52
685 1165 0.033504 TGGTGCTCACGGAGTTTCTC 59.966 55.000 3.38 0.00 41.61 2.87
686 1166 0.670854 GGTGCTCACGGAGTTTCTCC 60.671 60.000 5.79 5.79 46.44 3.71
700 1180 7.323049 GGAGTTTCTCCTATAAAGAAAAGCC 57.677 40.000 8.38 10.42 46.41 4.35
701 1181 6.884836 GGAGTTTCTCCTATAAAGAAAAGCCA 59.115 38.462 8.38 0.00 46.41 4.75
702 1182 7.393515 GGAGTTTCTCCTATAAAGAAAAGCCAA 59.606 37.037 8.38 0.00 46.41 4.52
703 1183 8.112016 AGTTTCTCCTATAAAGAAAAGCCAAC 57.888 34.615 10.15 1.39 42.63 3.77
704 1184 6.737254 TTCTCCTATAAAGAAAAGCCAACG 57.263 37.500 0.00 0.00 30.00 4.10
705 1185 5.801380 TCTCCTATAAAGAAAAGCCAACGT 58.199 37.500 0.00 0.00 0.00 3.99
706 1186 5.642063 TCTCCTATAAAGAAAAGCCAACGTG 59.358 40.000 0.00 0.00 0.00 4.49
707 1187 4.698304 TCCTATAAAGAAAAGCCAACGTGG 59.302 41.667 0.00 0.00 41.55 4.94
708 1188 3.934457 ATAAAGAAAAGCCAACGTGGG 57.066 42.857 3.93 3.93 38.19 4.61
724 1204 4.434483 GGTTAGCCCTTGGGTTGG 57.566 61.111 7.61 0.00 34.28 3.77
725 1205 1.463375 GGTTAGCCCTTGGGTTGGT 59.537 57.895 7.61 0.00 34.28 3.67
726 1206 0.611062 GGTTAGCCCTTGGGTTGGTC 60.611 60.000 7.61 0.00 34.28 4.02
727 1207 0.404426 GTTAGCCCTTGGGTTGGTCT 59.596 55.000 7.61 0.00 34.28 3.85
728 1208 0.696501 TTAGCCCTTGGGTTGGTCTC 59.303 55.000 7.61 0.00 34.28 3.36
729 1209 0.474854 TAGCCCTTGGGTTGGTCTCA 60.475 55.000 7.61 0.00 34.28 3.27
730 1210 1.142688 AGCCCTTGGGTTGGTCTCAT 61.143 55.000 7.61 0.00 0.00 2.90
731 1211 0.251787 GCCCTTGGGTTGGTCTCATT 60.252 55.000 7.61 0.00 0.00 2.57
732 1212 1.827245 GCCCTTGGGTTGGTCTCATTT 60.827 52.381 7.61 0.00 0.00 2.32
733 1213 2.608623 CCCTTGGGTTGGTCTCATTTT 58.391 47.619 0.00 0.00 0.00 1.82
734 1214 2.972021 CCCTTGGGTTGGTCTCATTTTT 59.028 45.455 0.00 0.00 0.00 1.94
879 1365 3.204382 TCCCATCTTTTTATCCTCCCACC 59.796 47.826 0.00 0.00 0.00 4.61
911 1397 4.142469 CGGAAACAATGTCTCCATTAACCC 60.142 45.833 6.55 0.00 39.28 4.11
1167 1659 4.329545 GTCTCCAAGGCCGTGGCA 62.330 66.667 30.86 17.76 44.11 4.92
1242 1734 4.386245 CGCAGCTTCGACTACTCC 57.614 61.111 0.00 0.00 0.00 3.85
1302 1794 0.184933 AGATCGCTGCCTACCTCTCT 59.815 55.000 0.00 0.00 0.00 3.10
1536 2028 2.743928 CTCCTTGAGCGCGCCTTT 60.744 61.111 30.33 9.92 0.00 3.11
2538 3030 1.896660 GTTGACGGTGTGCCATGGT 60.897 57.895 14.67 0.00 34.09 3.55
2736 3228 2.376518 GGAGGATAAGGATGATGGGCAA 59.623 50.000 0.00 0.00 0.00 4.52
2886 3378 1.410882 GCAGGAGAGGGCACTAGTAAG 59.589 57.143 0.00 0.00 0.00 2.34
3426 4069 9.886132 AAATTACCTGGTCTATACACAGTTAAG 57.114 33.333 0.63 0.00 0.00 1.85
4030 4673 3.399234 TGGTGAGACCATAGGTGCT 57.601 52.632 0.00 0.00 44.79 4.40
4343 4986 3.740832 GCCCATTTTAACTTCACTTGTGC 59.259 43.478 0.00 0.00 0.00 4.57
4349 4998 8.863049 CCATTTTAACTTCACTTGTGCATAATC 58.137 33.333 0.00 0.00 0.00 1.75
4374 5023 9.631257 TCATAATCATAATCATGGACAACTTGT 57.369 29.630 0.00 0.00 32.61 3.16
4375 5024 9.673454 CATAATCATAATCATGGACAACTTGTG 57.327 33.333 0.00 0.00 32.61 3.33
4376 5025 5.565592 TCATAATCATGGACAACTTGTGC 57.434 39.130 6.48 6.48 39.30 4.57
4387 5036 7.643569 TGGACAACTTGTGCATAATCATTAT 57.356 32.000 11.74 0.00 43.78 1.28
4440 5089 2.565841 ACTTGTGCTTGGACTCTGAAC 58.434 47.619 0.00 0.00 0.00 3.18
4493 5142 9.677567 TTGTTTGATTAAGCATGTAAGAAAGAC 57.322 29.630 0.00 0.00 0.00 3.01
4581 5230 5.615289 AGAGTGTAATTCTTTCTGTGCACT 58.385 37.500 19.41 0.00 38.45 4.40
5200 5849 4.746535 TTCACTGGTGTGTAGACAGAAA 57.253 40.909 0.00 0.00 44.14 2.52
5221 5870 8.526147 CAGAAACATTATCTCACCTTTTCCATT 58.474 33.333 0.00 0.00 0.00 3.16
5233 5882 7.861629 TCACCTTTTCCATTATCTATGACAGT 58.138 34.615 0.00 0.00 36.26 3.55
5477 6126 6.767902 TGACCAATATAGAATCCAGCAAGTTC 59.232 38.462 0.00 0.00 0.00 3.01
5616 6265 2.371841 TCTTCAGGTTAGCTGCTTTCCA 59.628 45.455 7.79 0.00 0.00 3.53
5739 6388 7.618502 TTTATTGGTCATGTGTGTGGTATAC 57.381 36.000 0.00 0.00 0.00 1.47
5749 6398 1.481772 GTGTGGTATACCCGTGCCTTA 59.518 52.381 19.42 0.00 35.15 2.69
5884 6539 6.072175 TGCTAGTTTTTAATAGTGCAACCTGG 60.072 38.462 0.00 0.00 37.80 4.45
5934 6589 9.073368 CACATTGCTTCTATTTTTCTCATGAAG 57.927 33.333 0.00 0.00 35.42 3.02
5988 6643 8.696410 AACACAAAAGTAACAACAGTATTTGG 57.304 30.769 0.00 0.00 32.20 3.28
5993 6648 6.952773 AAGTAACAACAGTATTTGGCAGAA 57.047 33.333 0.00 0.00 0.00 3.02
6032 6687 8.403474 AGGGGAAAAGGTTAAATGTAAGGAATA 58.597 33.333 0.00 0.00 0.00 1.75
6047 6702 4.785346 AGGAATAAGATGTGGCATCACT 57.215 40.909 11.12 1.57 43.94 3.41
6245 7025 7.844779 TGAACTAGGAAGGTAGATTTATGGTCT 59.155 37.037 0.00 0.00 0.00 3.85
6263 7043 5.551233 TGGTCTGGTCTAGAGTTTGAATTG 58.449 41.667 0.00 0.00 35.70 2.32
6345 7125 1.100510 TCTGTTATCTCCCGTGTCCG 58.899 55.000 0.00 0.00 0.00 4.79
6470 7252 2.838202 TCATCCTCCCTAACCAGTGTTC 59.162 50.000 0.00 0.00 35.87 3.18
6657 7439 3.005050 AGTCACACAATTTCATGGTGCAG 59.995 43.478 0.00 0.00 36.00 4.41
6725 7507 7.451255 TGAACATTTAATCAGAATCAACCCAGT 59.549 33.333 0.00 0.00 0.00 4.00
6746 7528 5.796935 CAGTGCATTTTGTAATAGCAGTCAC 59.203 40.000 0.00 0.00 33.30 3.67
6804 7586 5.768164 ACAGTGTGATTTAAGGTTAAGGGTG 59.232 40.000 0.00 0.00 0.00 4.61
6810 7592 5.242838 TGATTTAAGGTTAAGGGTGCAACTG 59.757 40.000 0.00 0.00 36.74 3.16
6934 7719 4.106197 TCACGTATTTGTTGTTTGGTTGC 58.894 39.130 0.00 0.00 0.00 4.17
6997 7782 1.598130 GCTGTTTGCGTCCAGGAGT 60.598 57.895 0.00 0.00 0.00 3.85
7058 7845 8.950210 GGATTCAGATTTGAGTTTCTGTCATTA 58.050 33.333 0.00 0.00 40.22 1.90
7101 7888 9.624697 TTCATGCATTATTTTGTTTCTAGTGAC 57.375 29.630 0.00 0.00 0.00 3.67
7219 8006 3.639099 CACTTCTGGTGCCTCATGT 57.361 52.632 0.00 0.00 39.22 3.21
7249 8039 4.369182 AGCGTCATATTTTAGGAAGACGG 58.631 43.478 13.56 0.00 46.17 4.79
7250 8040 3.059800 GCGTCATATTTTAGGAAGACGGC 60.060 47.826 13.56 3.86 46.17 5.68
7285 8075 3.407209 ACTCCCTCCATCCCACAATATT 58.593 45.455 0.00 0.00 0.00 1.28
7339 8129 2.170607 CCTCCGTCCCACAATGTAAGAT 59.829 50.000 0.00 0.00 0.00 2.40
7409 8199 9.862149 GGAGGGATTATTAGGAAGATTACAAAA 57.138 33.333 0.00 0.00 0.00 2.44
7455 8245 4.745620 CGCCATAGTTTAGAAAGGTAGCTC 59.254 45.833 0.00 0.00 0.00 4.09
7616 8406 2.159028 GGCTGGGTGTTTTGCTTGTTTA 60.159 45.455 0.00 0.00 0.00 2.01
7675 8465 7.011994 TGGATTTATTATGTACTCCCTCCGTA 58.988 38.462 0.00 0.00 0.00 4.02
7676 8466 7.510001 TGGATTTATTATGTACTCCCTCCGTAA 59.490 37.037 0.00 0.00 0.00 3.18
7677 8467 8.370182 GGATTTATTATGTACTCCCTCCGTAAA 58.630 37.037 0.00 0.00 0.00 2.01
7678 8468 9.939802 GATTTATTATGTACTCCCTCCGTAAAT 57.060 33.333 0.00 0.00 0.00 1.40
7691 8481 8.197592 TCCCTCCGTAAATAAATATAAGAGCA 57.802 34.615 0.00 0.00 0.00 4.26
7692 8482 8.822805 TCCCTCCGTAAATAAATATAAGAGCAT 58.177 33.333 0.00 0.00 0.00 3.79
7693 8483 9.449719 CCCTCCGTAAATAAATATAAGAGCATT 57.550 33.333 0.00 0.00 0.00 3.56
7828 8633 3.936535 GGGACGGAGGGAGTAGTG 58.063 66.667 0.00 0.00 0.00 2.74
7927 8732 4.825546 ATCAGCTTCAGTGTTGTCTTTG 57.174 40.909 0.00 0.00 0.00 2.77
7928 8733 3.609853 TCAGCTTCAGTGTTGTCTTTGT 58.390 40.909 0.00 0.00 0.00 2.83
7981 8786 8.447924 AGGATCATCTTCTGTAAATCATGTTG 57.552 34.615 0.00 0.00 0.00 3.33
8144 8949 2.198827 TAATGGGCTTGGTGACACAG 57.801 50.000 8.08 0.00 42.67 3.66
8206 9011 6.605471 TTTCAATAGAGTAACTCCTGCTGA 57.395 37.500 0.00 0.00 0.00 4.26
8246 9051 9.770097 TTCATCTATGTATGTTTCTCCAGATTC 57.230 33.333 0.00 0.00 0.00 2.52
8456 9261 3.096852 TCTGCGATCAGAAAGTAGGGAA 58.903 45.455 0.00 0.00 45.69 3.97
8536 9342 1.896465 CCTGAGATTCCCGGATAGGAC 59.104 57.143 0.73 0.00 45.00 3.85
8834 9641 5.628193 CCCACGATTGTATTCTGATACGTAC 59.372 44.000 0.00 0.00 40.85 3.67
8870 9677 5.879223 AGTCTCTTGCCATGAACTATTTCTG 59.121 40.000 0.00 0.00 32.36 3.02
8954 9761 1.134098 AGGTGTCTGTCCAACAACTGG 60.134 52.381 0.00 0.00 42.94 4.00
9063 9882 6.030228 GTGCCTTGCATTATCTTCTTACAAC 58.970 40.000 0.00 0.00 41.91 3.32
9070 9889 8.718102 TGCATTATCTTCTTACAACTAAGGAC 57.282 34.615 0.00 0.00 31.60 3.85
9124 9943 6.650807 TGTTGCTCCAAGAGTTAGATTTGTAG 59.349 38.462 0.00 0.00 31.39 2.74
9125 9944 6.605471 TGCTCCAAGAGTTAGATTTGTAGA 57.395 37.500 0.00 0.00 31.39 2.59
9126 9945 7.187824 TGCTCCAAGAGTTAGATTTGTAGAT 57.812 36.000 0.00 0.00 31.39 1.98
9127 9946 8.306313 TGCTCCAAGAGTTAGATTTGTAGATA 57.694 34.615 0.00 0.00 31.39 1.98
9166 10149 0.250901 ACAACCCAGTGGCAGATCAC 60.251 55.000 2.61 0.00 37.89 3.06
9168 10151 2.142292 AACCCAGTGGCAGATCACCC 62.142 60.000 2.61 0.00 38.34 4.61
9169 10152 2.304056 CCCAGTGGCAGATCACCCT 61.304 63.158 2.61 0.00 38.34 4.34
9170 10153 1.077930 CCAGTGGCAGATCACCCTG 60.078 63.158 0.00 6.00 38.34 4.45
9171 10154 1.681666 CAGTGGCAGATCACCCTGT 59.318 57.895 0.00 0.00 38.34 4.00
9172 10155 0.037303 CAGTGGCAGATCACCCTGTT 59.963 55.000 0.00 0.00 38.34 3.16
9173 10156 0.326264 AGTGGCAGATCACCCTGTTC 59.674 55.000 0.00 0.00 38.34 3.18
9174 10157 0.326264 GTGGCAGATCACCCTGTTCT 59.674 55.000 0.00 0.00 36.57 3.01
9175 10158 1.555075 GTGGCAGATCACCCTGTTCTA 59.445 52.381 0.00 0.00 36.57 2.10
9176 10159 2.027192 GTGGCAGATCACCCTGTTCTAA 60.027 50.000 0.00 0.00 36.57 2.10
9177 10160 2.846206 TGGCAGATCACCCTGTTCTAAT 59.154 45.455 0.00 0.00 36.57 1.73
9178 10161 4.037222 TGGCAGATCACCCTGTTCTAATA 58.963 43.478 0.00 0.00 36.57 0.98
9179 10162 4.473196 TGGCAGATCACCCTGTTCTAATAA 59.527 41.667 0.00 0.00 36.57 1.40
9180 10163 5.045213 TGGCAGATCACCCTGTTCTAATAAA 60.045 40.000 0.00 0.00 36.57 1.40
9181 10164 6.064717 GGCAGATCACCCTGTTCTAATAAAT 58.935 40.000 0.00 0.00 36.57 1.40
9182 10165 6.016777 GGCAGATCACCCTGTTCTAATAAATG 60.017 42.308 0.00 0.00 36.57 2.32
9183 10166 6.767902 GCAGATCACCCTGTTCTAATAAATGA 59.232 38.462 0.00 0.00 36.57 2.57
9184 10167 7.041508 GCAGATCACCCTGTTCTAATAAATGAG 60.042 40.741 0.00 0.00 36.57 2.90
9185 10168 7.989741 CAGATCACCCTGTTCTAATAAATGAGT 59.010 37.037 0.00 0.00 0.00 3.41
9186 10169 9.213777 AGATCACCCTGTTCTAATAAATGAGTA 57.786 33.333 0.00 0.00 0.00 2.59
9189 10172 8.429641 TCACCCTGTTCTAATAAATGAGTATCC 58.570 37.037 0.00 0.00 0.00 2.59
9221 10204 3.835395 GGAGAGGATACCTTATGACCCTG 59.165 52.174 0.00 0.00 31.76 4.45
9243 10226 9.765795 CCCTGTTCTAATAAACTAGATAAGTGG 57.234 37.037 0.00 0.00 38.88 4.00
9244 10227 9.262358 CCTGTTCTAATAAACTAGATAAGTGGC 57.738 37.037 0.00 0.00 38.88 5.01
9245 10228 9.262358 CTGTTCTAATAAACTAGATAAGTGGCC 57.738 37.037 0.00 0.00 38.88 5.36
9246 10229 8.208903 TGTTCTAATAAACTAGATAAGTGGCCC 58.791 37.037 0.00 0.00 38.88 5.80
9247 10230 6.989659 TCTAATAAACTAGATAAGTGGCCCG 58.010 40.000 0.00 0.00 38.88 6.13
9248 10231 2.327200 AAACTAGATAAGTGGCCCGC 57.673 50.000 0.00 0.00 38.88 6.13
9249 10232 0.468648 AACTAGATAAGTGGCCCGCC 59.531 55.000 0.00 0.00 38.88 6.13
9250 10233 0.398664 ACTAGATAAGTGGCCCGCCT 60.399 55.000 7.35 0.00 36.93 5.52
9251 10234 0.759346 CTAGATAAGTGGCCCGCCTT 59.241 55.000 7.35 2.10 36.94 4.35
9252 10235 0.468226 TAGATAAGTGGCCCGCCTTG 59.532 55.000 7.35 0.00 36.94 3.61
9253 10236 2.440247 ATAAGTGGCCCGCCTTGC 60.440 61.111 7.35 0.00 36.94 4.01
9284 10267 2.125350 CCTCAGGGCGAGCAACTC 60.125 66.667 0.00 0.00 40.78 3.01
9285 10268 2.659016 CTCAGGGCGAGCAACTCA 59.341 61.111 0.00 0.00 34.18 3.41
9286 10269 1.739562 CTCAGGGCGAGCAACTCAC 60.740 63.158 0.00 0.00 34.18 3.51
9287 10270 2.031012 CAGGGCGAGCAACTCACA 59.969 61.111 0.00 0.00 0.00 3.58
9288 10271 1.376424 CAGGGCGAGCAACTCACAT 60.376 57.895 0.00 0.00 0.00 3.21
9289 10272 1.376424 AGGGCGAGCAACTCACATG 60.376 57.895 0.00 0.00 0.00 3.21
9290 10273 2.401766 GGGCGAGCAACTCACATGG 61.402 63.158 0.00 0.00 0.00 3.66
9291 10274 1.375908 GGCGAGCAACTCACATGGA 60.376 57.895 0.00 0.00 0.00 3.41
9292 10275 0.955428 GGCGAGCAACTCACATGGAA 60.955 55.000 0.00 0.00 0.00 3.53
9293 10276 0.874390 GCGAGCAACTCACATGGAAA 59.126 50.000 0.00 0.00 0.00 3.13
9294 10277 1.266718 GCGAGCAACTCACATGGAAAA 59.733 47.619 0.00 0.00 0.00 2.29
9295 10278 2.287547 GCGAGCAACTCACATGGAAAAA 60.288 45.455 0.00 0.00 0.00 1.94
9296 10279 3.612479 GCGAGCAACTCACATGGAAAAAT 60.612 43.478 0.00 0.00 0.00 1.82
9297 10280 4.161333 CGAGCAACTCACATGGAAAAATC 58.839 43.478 0.00 0.00 0.00 2.17
9298 10281 4.320421 CGAGCAACTCACATGGAAAAATCA 60.320 41.667 0.00 0.00 0.00 2.57
9299 10282 5.620654 CGAGCAACTCACATGGAAAAATCAT 60.621 40.000 0.00 0.00 0.00 2.45
9300 10283 6.105397 AGCAACTCACATGGAAAAATCATT 57.895 33.333 0.00 0.00 0.00 2.57
9301 10284 6.527423 AGCAACTCACATGGAAAAATCATTT 58.473 32.000 0.00 0.00 0.00 2.32
9302 10285 6.425721 AGCAACTCACATGGAAAAATCATTTG 59.574 34.615 0.00 0.00 0.00 2.32
9303 10286 6.595794 CAACTCACATGGAAAAATCATTTGC 58.404 36.000 0.00 0.00 0.00 3.68
9304 10287 5.856156 ACTCACATGGAAAAATCATTTGCA 58.144 33.333 0.00 0.00 34.38 4.08
9305 10288 5.697633 ACTCACATGGAAAAATCATTTGCAC 59.302 36.000 0.00 0.00 32.74 4.57
9306 10289 4.996122 TCACATGGAAAAATCATTTGCACC 59.004 37.500 0.00 0.00 32.74 5.01
9307 10290 4.755629 CACATGGAAAAATCATTTGCACCA 59.244 37.500 0.00 5.89 32.74 4.17
9308 10291 4.998672 ACATGGAAAAATCATTTGCACCAG 59.001 37.500 0.00 4.91 33.69 4.00
9309 10292 4.952071 TGGAAAAATCATTTGCACCAGA 57.048 36.364 0.00 0.00 0.00 3.86
9310 10293 5.287674 TGGAAAAATCATTTGCACCAGAA 57.712 34.783 0.00 0.00 0.00 3.02
9311 10294 5.055812 TGGAAAAATCATTTGCACCAGAAC 58.944 37.500 0.00 0.00 0.00 3.01
9312 10295 5.055812 GGAAAAATCATTTGCACCAGAACA 58.944 37.500 0.00 0.00 0.00 3.18
9313 10296 5.702209 GGAAAAATCATTTGCACCAGAACAT 59.298 36.000 0.00 0.00 0.00 2.71
9314 10297 6.873076 GGAAAAATCATTTGCACCAGAACATA 59.127 34.615 0.00 0.00 0.00 2.29
9315 10298 7.387397 GGAAAAATCATTTGCACCAGAACATAA 59.613 33.333 0.00 0.00 0.00 1.90
9316 10299 7.656707 AAAATCATTTGCACCAGAACATAAC 57.343 32.000 0.00 0.00 0.00 1.89
9317 10300 4.782019 TCATTTGCACCAGAACATAACC 57.218 40.909 0.00 0.00 0.00 2.85
9318 10301 4.148079 TCATTTGCACCAGAACATAACCA 58.852 39.130 0.00 0.00 0.00 3.67
9319 10302 4.586421 TCATTTGCACCAGAACATAACCAA 59.414 37.500 0.00 0.00 0.00 3.67
9320 10303 5.069648 TCATTTGCACCAGAACATAACCAAA 59.930 36.000 0.00 0.00 0.00 3.28
9321 10304 5.344743 TTTGCACCAGAACATAACCAAAA 57.655 34.783 0.00 0.00 0.00 2.44
9322 10305 4.314740 TGCACCAGAACATAACCAAAAC 57.685 40.909 0.00 0.00 0.00 2.43
9323 10306 3.701542 TGCACCAGAACATAACCAAAACA 59.298 39.130 0.00 0.00 0.00 2.83
9324 10307 4.160439 TGCACCAGAACATAACCAAAACAA 59.840 37.500 0.00 0.00 0.00 2.83
9325 10308 5.112686 GCACCAGAACATAACCAAAACAAA 58.887 37.500 0.00 0.00 0.00 2.83
9326 10309 5.582665 GCACCAGAACATAACCAAAACAAAA 59.417 36.000 0.00 0.00 0.00 2.44
9327 10310 6.456315 GCACCAGAACATAACCAAAACAAAAC 60.456 38.462 0.00 0.00 0.00 2.43
9328 10311 6.591834 CACCAGAACATAACCAAAACAAAACA 59.408 34.615 0.00 0.00 0.00 2.83
9329 10312 7.118390 CACCAGAACATAACCAAAACAAAACAA 59.882 33.333 0.00 0.00 0.00 2.83
9330 10313 7.826744 ACCAGAACATAACCAAAACAAAACAAT 59.173 29.630 0.00 0.00 0.00 2.71
9331 10314 8.334632 CCAGAACATAACCAAAACAAAACAATC 58.665 33.333 0.00 0.00 0.00 2.67
9332 10315 8.877779 CAGAACATAACCAAAACAAAACAATCA 58.122 29.630 0.00 0.00 0.00 2.57
9333 10316 8.878769 AGAACATAACCAAAACAAAACAATCAC 58.121 29.630 0.00 0.00 0.00 3.06
9334 10317 8.553459 AACATAACCAAAACAAAACAATCACA 57.447 26.923 0.00 0.00 0.00 3.58
9335 10318 8.553459 ACATAACCAAAACAAAACAATCACAA 57.447 26.923 0.00 0.00 0.00 3.33
9336 10319 8.663911 ACATAACCAAAACAAAACAATCACAAG 58.336 29.630 0.00 0.00 0.00 3.16
9337 10320 6.493449 AACCAAAACAAAACAATCACAAGG 57.507 33.333 0.00 0.00 0.00 3.61
9338 10321 5.799213 ACCAAAACAAAACAATCACAAGGA 58.201 33.333 0.00 0.00 0.00 3.36
9339 10322 6.234177 ACCAAAACAAAACAATCACAAGGAA 58.766 32.000 0.00 0.00 0.00 3.36
9340 10323 6.712547 ACCAAAACAAAACAATCACAAGGAAA 59.287 30.769 0.00 0.00 0.00 3.13
9341 10324 7.020602 CCAAAACAAAACAATCACAAGGAAAC 58.979 34.615 0.00 0.00 0.00 2.78
9342 10325 7.308229 CCAAAACAAAACAATCACAAGGAAACA 60.308 33.333 0.00 0.00 0.00 2.83
9343 10326 7.920160 AAACAAAACAATCACAAGGAAACAT 57.080 28.000 0.00 0.00 0.00 2.71
9344 10327 6.907206 ACAAAACAATCACAAGGAAACATG 57.093 33.333 0.00 0.00 34.56 3.21
9345 10328 6.405538 ACAAAACAATCACAAGGAAACATGT 58.594 32.000 0.00 0.00 44.38 3.21
9346 10329 6.878389 ACAAAACAATCACAAGGAAACATGTT 59.122 30.769 4.92 4.92 39.71 2.71
9347 10330 7.390162 ACAAAACAATCACAAGGAAACATGTTT 59.610 29.630 23.49 23.49 39.71 2.83
9348 10331 6.907206 AACAATCACAAGGAAACATGTTTG 57.093 33.333 27.85 16.48 39.71 2.93
9349 10332 5.976458 ACAATCACAAGGAAACATGTTTGT 58.024 33.333 27.85 17.14 39.71 2.83
9350 10333 7.106439 ACAATCACAAGGAAACATGTTTGTA 57.894 32.000 27.85 9.77 39.71 2.41
9351 10334 6.978080 ACAATCACAAGGAAACATGTTTGTAC 59.022 34.615 27.85 16.79 39.71 2.90
9352 10335 6.707440 ATCACAAGGAAACATGTTTGTACA 57.293 33.333 27.85 10.63 39.71 2.90
9353 10336 5.885881 TCACAAGGAAACATGTTTGTACAC 58.114 37.500 27.85 12.83 39.71 2.90
9354 10337 5.650266 TCACAAGGAAACATGTTTGTACACT 59.350 36.000 27.85 14.09 39.71 3.55
9355 10338 6.151985 TCACAAGGAAACATGTTTGTACACTT 59.848 34.615 27.85 18.31 39.71 3.16
9356 10339 6.253298 CACAAGGAAACATGTTTGTACACTTG 59.747 38.462 27.85 27.10 39.71 3.16
9357 10340 5.514274 AGGAAACATGTTTGTACACTTGG 57.486 39.130 27.85 0.00 37.03 3.61
9358 10341 4.953579 AGGAAACATGTTTGTACACTTGGT 59.046 37.500 27.85 0.00 37.03 3.67
9359 10342 5.420739 AGGAAACATGTTTGTACACTTGGTT 59.579 36.000 27.85 0.00 37.03 3.67
9360 10343 5.746721 GGAAACATGTTTGTACACTTGGTTC 59.253 40.000 27.85 15.99 43.19 3.62
9361 10344 6.405397 GGAAACATGTTTGTACACTTGGTTCT 60.405 38.462 27.85 0.00 43.33 3.01
9362 10345 7.201750 GGAAACATGTTTGTACACTTGGTTCTA 60.202 37.037 27.85 0.00 43.33 2.10
9363 10346 6.613755 ACATGTTTGTACACTTGGTTCTAC 57.386 37.500 0.00 0.00 37.03 2.59
9364 10347 6.116806 ACATGTTTGTACACTTGGTTCTACA 58.883 36.000 0.00 0.00 37.03 2.74
9365 10348 6.260050 ACATGTTTGTACACTTGGTTCTACAG 59.740 38.462 0.00 0.00 37.03 2.74
9366 10349 4.573201 TGTTTGTACACTTGGTTCTACAGC 59.427 41.667 0.00 0.00 0.00 4.40
9367 10350 3.396260 TGTACACTTGGTTCTACAGCC 57.604 47.619 0.00 0.00 0.00 4.85
9368 10351 2.701423 TGTACACTTGGTTCTACAGCCA 59.299 45.455 0.00 0.00 0.00 4.75
9369 10352 3.134985 TGTACACTTGGTTCTACAGCCAA 59.865 43.478 0.00 0.00 41.90 4.52
9370 10353 2.572290 ACACTTGGTTCTACAGCCAAC 58.428 47.619 0.00 0.00 39.57 3.77
9371 10354 1.531149 CACTTGGTTCTACAGCCAACG 59.469 52.381 0.00 0.00 39.57 4.10
9372 10355 1.140252 ACTTGGTTCTACAGCCAACGT 59.860 47.619 0.00 0.00 39.57 3.99
9373 10356 2.366266 ACTTGGTTCTACAGCCAACGTA 59.634 45.455 0.00 0.00 39.57 3.57
9374 10357 3.007614 ACTTGGTTCTACAGCCAACGTAT 59.992 43.478 0.00 0.00 39.57 3.06
9375 10358 3.241067 TGGTTCTACAGCCAACGTATC 57.759 47.619 0.00 0.00 0.00 2.24
9376 10359 2.093869 TGGTTCTACAGCCAACGTATCC 60.094 50.000 0.00 0.00 0.00 2.59
9377 10360 2.093869 GGTTCTACAGCCAACGTATCCA 60.094 50.000 0.00 0.00 0.00 3.41
9378 10361 2.928116 GTTCTACAGCCAACGTATCCAC 59.072 50.000 0.00 0.00 0.00 4.02
9379 10362 2.172679 TCTACAGCCAACGTATCCACA 58.827 47.619 0.00 0.00 0.00 4.17
9380 10363 2.563620 TCTACAGCCAACGTATCCACAA 59.436 45.455 0.00 0.00 0.00 3.33
9381 10364 1.808411 ACAGCCAACGTATCCACAAG 58.192 50.000 0.00 0.00 0.00 3.16
9382 10365 1.086696 CAGCCAACGTATCCACAAGG 58.913 55.000 0.00 0.00 0.00 3.61
9383 10366 0.690762 AGCCAACGTATCCACAAGGT 59.309 50.000 0.00 0.00 35.89 3.50
9384 10367 1.903860 AGCCAACGTATCCACAAGGTA 59.096 47.619 0.00 0.00 35.89 3.08
9385 10368 2.093658 AGCCAACGTATCCACAAGGTAG 60.094 50.000 0.00 0.00 35.89 3.18
9386 10369 2.277084 CCAACGTATCCACAAGGTAGC 58.723 52.381 0.00 0.00 35.89 3.58
9387 10370 2.277084 CAACGTATCCACAAGGTAGCC 58.723 52.381 0.00 0.00 35.89 3.93
9388 10371 0.828677 ACGTATCCACAAGGTAGCCC 59.171 55.000 0.00 0.00 35.89 5.19
9389 10372 1.120530 CGTATCCACAAGGTAGCCCT 58.879 55.000 0.00 0.00 45.63 5.19
9390 10373 1.202533 CGTATCCACAAGGTAGCCCTG 60.203 57.143 0.00 0.00 41.56 4.45
9391 10374 1.838077 GTATCCACAAGGTAGCCCTGT 59.162 52.381 0.00 0.00 41.56 4.00
9392 10375 2.263895 ATCCACAAGGTAGCCCTGTA 57.736 50.000 0.00 0.00 41.56 2.74
9393 10376 1.568504 TCCACAAGGTAGCCCTGTAG 58.431 55.000 0.00 0.00 41.56 2.74
9394 10377 1.203262 TCCACAAGGTAGCCCTGTAGT 60.203 52.381 0.00 0.00 41.56 2.73
9395 10378 1.207329 CCACAAGGTAGCCCTGTAGTC 59.793 57.143 0.00 0.00 41.56 2.59
9396 10379 1.207329 CACAAGGTAGCCCTGTAGTCC 59.793 57.143 0.00 0.00 41.56 3.85
9397 10380 1.078989 ACAAGGTAGCCCTGTAGTCCT 59.921 52.381 0.00 0.00 41.56 3.85
9398 10381 2.313945 ACAAGGTAGCCCTGTAGTCCTA 59.686 50.000 0.00 0.00 41.56 2.94
9399 10382 3.245875 ACAAGGTAGCCCTGTAGTCCTAA 60.246 47.826 0.00 0.00 41.56 2.69
9400 10383 3.315880 AGGTAGCCCTGTAGTCCTAAG 57.684 52.381 0.00 0.00 40.58 2.18
9401 10384 1.687660 GGTAGCCCTGTAGTCCTAAGC 59.312 57.143 0.00 0.00 0.00 3.09
9402 10385 2.668625 GTAGCCCTGTAGTCCTAAGCT 58.331 52.381 0.00 0.00 0.00 3.74
9403 10386 3.436180 GGTAGCCCTGTAGTCCTAAGCTA 60.436 52.174 0.00 0.00 0.00 3.32
9404 10387 3.621682 AGCCCTGTAGTCCTAAGCTAT 57.378 47.619 0.00 0.00 0.00 2.97
9405 10388 4.743705 AGCCCTGTAGTCCTAAGCTATA 57.256 45.455 0.00 0.00 0.00 1.31
9406 10389 4.409187 AGCCCTGTAGTCCTAAGCTATAC 58.591 47.826 0.00 0.00 0.00 1.47
9407 10390 4.106663 AGCCCTGTAGTCCTAAGCTATACT 59.893 45.833 0.00 0.00 0.00 2.12
9408 10391 5.312708 AGCCCTGTAGTCCTAAGCTATACTA 59.687 44.000 0.00 0.00 0.00 1.82
9409 10392 5.415389 GCCCTGTAGTCCTAAGCTATACTAC 59.585 48.000 15.57 15.57 42.91 2.73
9411 10394 6.430616 CCCTGTAGTCCTAAGCTATACTACAC 59.569 46.154 18.87 5.56 45.64 2.90
9412 10395 7.225725 CCTGTAGTCCTAAGCTATACTACACT 58.774 42.308 18.87 5.90 45.64 3.55
9413 10396 8.373981 CCTGTAGTCCTAAGCTATACTACACTA 58.626 40.741 18.87 5.15 45.64 2.74
9414 10397 9.206870 CTGTAGTCCTAAGCTATACTACACTAC 57.793 40.741 18.87 13.96 45.64 2.73
9415 10398 8.153550 TGTAGTCCTAAGCTATACTACACTACC 58.846 40.741 18.87 2.36 45.64 3.18
9416 10399 7.391388 AGTCCTAAGCTATACTACACTACCT 57.609 40.000 0.00 0.00 0.00 3.08
9417 10400 7.452562 AGTCCTAAGCTATACTACACTACCTC 58.547 42.308 0.00 0.00 0.00 3.85
9418 10401 7.293062 AGTCCTAAGCTATACTACACTACCTCT 59.707 40.741 0.00 0.00 0.00 3.69
9419 10402 7.388500 GTCCTAAGCTATACTACACTACCTCTG 59.612 44.444 0.00 0.00 0.00 3.35
9420 10403 7.291885 TCCTAAGCTATACTACACTACCTCTGA 59.708 40.741 0.00 0.00 0.00 3.27
9421 10404 8.104566 CCTAAGCTATACTACACTACCTCTGAT 58.895 40.741 0.00 0.00 0.00 2.90
9422 10405 9.509956 CTAAGCTATACTACACTACCTCTGATT 57.490 37.037 0.00 0.00 0.00 2.57
9423 10406 7.989416 AGCTATACTACACTACCTCTGATTC 57.011 40.000 0.00 0.00 0.00 2.52
9424 10407 7.751646 AGCTATACTACACTACCTCTGATTCT 58.248 38.462 0.00 0.00 0.00 2.40
9425 10408 7.881232 AGCTATACTACACTACCTCTGATTCTC 59.119 40.741 0.00 0.00 0.00 2.87
9426 10409 7.662258 GCTATACTACACTACCTCTGATTCTCA 59.338 40.741 0.00 0.00 0.00 3.27
9427 10410 9.214957 CTATACTACACTACCTCTGATTCTCAG 57.785 40.741 0.00 0.00 45.59 3.35
9442 10425 7.912056 TGATTCTCAGAAATTTCGTCATTCT 57.088 32.000 12.42 0.00 33.83 2.40
9444 10427 5.536554 TCTCAGAAATTTCGTCATTCTGC 57.463 39.130 12.42 0.00 46.06 4.26
9445 10428 5.240891 TCTCAGAAATTTCGTCATTCTGCT 58.759 37.500 12.42 0.00 46.06 4.24
9446 10429 5.349817 TCTCAGAAATTTCGTCATTCTGCTC 59.650 40.000 12.42 0.00 46.06 4.26
9447 10430 4.393062 TCAGAAATTTCGTCATTCTGCTCC 59.607 41.667 12.42 0.00 46.06 4.70
9448 10431 4.154737 CAGAAATTTCGTCATTCTGCTCCA 59.845 41.667 12.42 0.00 42.33 3.86
9449 10432 4.154918 AGAAATTTCGTCATTCTGCTCCAC 59.845 41.667 12.42 0.00 32.42 4.02
9450 10433 1.808411 TTTCGTCATTCTGCTCCACC 58.192 50.000 0.00 0.00 0.00 4.61
9451 10434 0.684535 TTCGTCATTCTGCTCCACCA 59.315 50.000 0.00 0.00 0.00 4.17
9452 10435 0.684535 TCGTCATTCTGCTCCACCAA 59.315 50.000 0.00 0.00 0.00 3.67
9453 10436 1.071542 TCGTCATTCTGCTCCACCAAA 59.928 47.619 0.00 0.00 0.00 3.28
9454 10437 1.879380 CGTCATTCTGCTCCACCAAAA 59.121 47.619 0.00 0.00 0.00 2.44
9455 10438 2.293122 CGTCATTCTGCTCCACCAAAAA 59.707 45.455 0.00 0.00 0.00 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 0.684153 ATTTGATGCCAGGGTTCCGG 60.684 55.000 0.00 0.00 0.00 5.14
96 103 8.651391 TTATTTATGGATTCGCGTTTTCTAGA 57.349 30.769 5.77 0.00 0.00 2.43
105 112 5.524511 TTCGGATTATTTATGGATTCGCG 57.475 39.130 0.00 0.00 0.00 5.87
123 130 5.049129 GGAGCTCTATTTTGATTGGATTCGG 60.049 44.000 14.64 0.00 0.00 4.30
176 183 1.718178 CATGTGCGCTCATACTCGATC 59.282 52.381 23.20 0.00 0.00 3.69
178 185 0.455815 ACATGTGCGCTCATACTCGA 59.544 50.000 23.20 0.00 0.00 4.04
219 228 8.626526 ACTTCGTAAAATTTAAAGGTGACATGT 58.373 29.630 0.00 0.00 0.00 3.21
233 242 8.291740 AGGCGTTTACAATAACTTCGTAAAATT 58.708 29.630 0.00 0.00 36.98 1.82
253 262 3.134574 TCCAGTTGATAACAAGGCGTT 57.865 42.857 0.00 0.00 41.91 4.84
260 269 3.921677 GGAGACGTTCCAGTTGATAACA 58.078 45.455 10.67 0.00 46.01 2.41
289 298 6.722225 TAGGATTTCCGACGTTACACGCTC 62.722 50.000 0.00 0.00 43.00 5.03
291 300 1.998684 AGGATTTCCGACGTTACACGC 60.999 52.381 0.00 0.00 43.00 5.34
294 303 8.545229 TTTATTTTAGGATTTCCGACGTTACA 57.455 30.769 0.00 0.00 42.08 2.41
298 307 8.271312 TGAATTTATTTTAGGATTTCCGACGT 57.729 30.769 0.00 0.00 42.08 4.34
301 310 9.640952 ATCCTGAATTTATTTTAGGATTTCCGA 57.359 29.630 7.17 0.00 39.24 4.55
331 340 3.803555 GATTTAAATCCTGATGCTCGCG 58.196 45.455 16.05 0.00 0.00 5.87
348 357 3.117131 GGTATCCCAACCCATCAGGATTT 60.117 47.826 0.00 0.00 39.77 2.17
409 419 1.359833 CACCAACACATGTGCGCTT 59.640 52.632 25.68 10.01 0.00 4.68
425 435 7.307514 CGAGAAGTACAGATGAGATACTACCAC 60.308 44.444 0.00 0.00 0.00 4.16
461 814 9.944663 TTTAAAACATCAAGTACATGTGAGAAC 57.055 29.630 9.11 0.00 34.59 3.01
491 849 8.046708 TGAAACTGCACTGTCCTTGTATATTAT 58.953 33.333 0.00 0.00 0.00 1.28
492 850 7.390823 TGAAACTGCACTGTCCTTGTATATTA 58.609 34.615 0.00 0.00 0.00 0.98
493 851 6.237901 TGAAACTGCACTGTCCTTGTATATT 58.762 36.000 0.00 0.00 0.00 1.28
494 852 5.804639 TGAAACTGCACTGTCCTTGTATAT 58.195 37.500 0.00 0.00 0.00 0.86
496 854 4.067896 CTGAAACTGCACTGTCCTTGTAT 58.932 43.478 0.00 0.00 0.00 2.29
512 989 5.585047 ACTGGTTGTACTCTGTTTCTGAAAC 59.415 40.000 22.94 22.94 41.73 2.78
516 993 4.693283 TCACTGGTTGTACTCTGTTTCTG 58.307 43.478 0.00 0.00 0.00 3.02
540 1020 8.594881 CCAACTGGTGTGAAGTTAGATATATC 57.405 38.462 4.42 4.42 35.70 1.63
611 1091 3.060615 GCAACCTCAGCTGCCCAG 61.061 66.667 9.47 0.70 32.18 4.45
612 1092 3.573229 AGCAACCTCAGCTGCCCA 61.573 61.111 9.47 0.00 41.61 5.36
617 1097 2.033757 CTGGCAGCAACCTCAGCT 59.966 61.111 0.00 0.00 44.62 4.24
618 1098 3.745803 GCTGGCAGCAACCTCAGC 61.746 66.667 33.33 4.00 44.34 4.26
619 1099 3.060615 GGCTGGCAGCAACCTCAG 61.061 66.667 37.49 0.50 44.75 3.35
620 1100 4.666253 GGGCTGGCAGCAACCTCA 62.666 66.667 37.49 0.00 44.75 3.86
621 1101 4.666253 TGGGCTGGCAGCAACCTC 62.666 66.667 37.49 21.25 44.75 3.85
622 1102 4.982701 GTGGGCTGGCAGCAACCT 62.983 66.667 37.49 0.00 44.75 3.50
631 1111 4.760047 CGAACTCGGGTGGGCTGG 62.760 72.222 0.00 0.00 35.37 4.85
632 1112 3.649277 CTCGAACTCGGGTGGGCTG 62.649 68.421 0.00 0.00 40.29 4.85
633 1113 3.382832 CTCGAACTCGGGTGGGCT 61.383 66.667 0.00 0.00 40.29 5.19
640 1120 3.744719 TGCGGGACTCGAACTCGG 61.745 66.667 0.00 0.00 42.43 4.63
641 1121 2.504244 GTGCGGGACTCGAACTCG 60.504 66.667 0.00 7.11 43.90 4.18
642 1122 2.504244 CGTGCGGGACTCGAACTC 60.504 66.667 3.90 0.00 45.05 3.01
643 1123 4.052229 CCGTGCGGGACTCGAACT 62.052 66.667 3.90 0.00 45.05 3.01
644 1124 4.047059 TCCGTGCGGGACTCGAAC 62.047 66.667 10.94 0.00 43.83 3.95
651 1131 4.386951 CCATGTGTCCGTGCGGGA 62.387 66.667 10.94 0.00 44.68 5.14
652 1132 4.697756 ACCATGTGTCCGTGCGGG 62.698 66.667 10.94 0.00 35.59 6.13
653 1133 3.422303 CACCATGTGTCCGTGCGG 61.422 66.667 3.94 3.94 0.00 5.69
654 1134 4.088762 GCACCATGTGTCCGTGCG 62.089 66.667 8.03 0.00 43.00 5.34
656 1136 1.301637 TGAGCACCATGTGTCCGTG 60.302 57.895 0.00 0.00 35.75 4.94
657 1137 1.301716 GTGAGCACCATGTGTCCGT 60.302 57.895 0.00 0.00 35.75 4.69
658 1138 2.382746 CGTGAGCACCATGTGTCCG 61.383 63.158 0.00 0.00 35.75 4.79
659 1139 2.034879 CCGTGAGCACCATGTGTCC 61.035 63.158 0.00 0.00 35.75 4.02
660 1140 1.005037 TCCGTGAGCACCATGTGTC 60.005 57.895 0.00 0.00 35.75 3.67
661 1141 1.004560 CTCCGTGAGCACCATGTGT 60.005 57.895 0.00 0.00 35.75 3.72
662 1142 0.603707 AACTCCGTGAGCACCATGTG 60.604 55.000 0.00 0.00 36.51 3.21
663 1143 0.108585 AAACTCCGTGAGCACCATGT 59.891 50.000 0.00 0.00 32.04 3.21
664 1144 0.798776 GAAACTCCGTGAGCACCATG 59.201 55.000 1.36 0.00 32.04 3.66
665 1145 0.687354 AGAAACTCCGTGAGCACCAT 59.313 50.000 1.36 0.00 32.04 3.55
666 1146 0.033504 GAGAAACTCCGTGAGCACCA 59.966 55.000 1.36 0.00 32.04 4.17
667 1147 0.670854 GGAGAAACTCCGTGAGCACC 60.671 60.000 1.97 0.00 41.08 5.01
668 1148 2.828933 GGAGAAACTCCGTGAGCAC 58.171 57.895 1.97 0.00 41.08 4.40
677 1157 7.923414 TGGCTTTTCTTTATAGGAGAAACTC 57.077 36.000 10.98 0.00 41.42 3.01
678 1158 7.094762 CGTTGGCTTTTCTTTATAGGAGAAACT 60.095 37.037 10.98 0.00 41.42 2.66
679 1159 7.021790 CGTTGGCTTTTCTTTATAGGAGAAAC 58.978 38.462 10.98 4.09 41.42 2.78
680 1160 6.713450 ACGTTGGCTTTTCTTTATAGGAGAAA 59.287 34.615 8.49 8.49 40.36 2.52
681 1161 6.148811 CACGTTGGCTTTTCTTTATAGGAGAA 59.851 38.462 0.00 0.00 0.00 2.87
682 1162 5.642063 CACGTTGGCTTTTCTTTATAGGAGA 59.358 40.000 0.00 0.00 0.00 3.71
683 1163 5.163754 CCACGTTGGCTTTTCTTTATAGGAG 60.164 44.000 0.00 0.00 0.00 3.69
684 1164 4.698304 CCACGTTGGCTTTTCTTTATAGGA 59.302 41.667 0.00 0.00 0.00 2.94
685 1165 4.142469 CCCACGTTGGCTTTTCTTTATAGG 60.142 45.833 0.00 0.00 35.79 2.57
686 1166 4.457949 ACCCACGTTGGCTTTTCTTTATAG 59.542 41.667 5.40 0.00 35.79 1.31
687 1167 4.400120 ACCCACGTTGGCTTTTCTTTATA 58.600 39.130 5.40 0.00 35.79 0.98
688 1168 3.227614 ACCCACGTTGGCTTTTCTTTAT 58.772 40.909 5.40 0.00 35.79 1.40
689 1169 2.657143 ACCCACGTTGGCTTTTCTTTA 58.343 42.857 5.40 0.00 35.79 1.85
690 1170 1.480789 ACCCACGTTGGCTTTTCTTT 58.519 45.000 5.40 0.00 35.79 2.52
691 1171 1.480789 AACCCACGTTGGCTTTTCTT 58.519 45.000 5.40 0.00 35.79 2.52
692 1172 2.227194 CTAACCCACGTTGGCTTTTCT 58.773 47.619 5.40 0.00 35.79 2.52
693 1173 2.699251 CTAACCCACGTTGGCTTTTC 57.301 50.000 5.40 0.00 35.79 2.29
707 1187 0.611062 GACCAACCCAAGGGCTAACC 60.611 60.000 4.70 0.00 39.32 2.85
708 1188 0.404426 AGACCAACCCAAGGGCTAAC 59.596 55.000 4.70 0.00 44.68 2.34
709 1189 2.877150 AGACCAACCCAAGGGCTAA 58.123 52.632 4.70 0.00 44.68 3.09
710 1190 4.681624 AGACCAACCCAAGGGCTA 57.318 55.556 4.70 0.00 44.68 3.93
712 1192 0.251787 AATGAGACCAACCCAAGGGC 60.252 55.000 4.70 0.00 39.32 5.19
713 1193 2.309136 AAATGAGACCAACCCAAGGG 57.691 50.000 2.91 2.91 42.03 3.95
732 1212 1.542547 GCTGTCTCTCCCGGTGAAAAA 60.543 52.381 0.00 0.00 0.00 1.94
733 1213 0.034896 GCTGTCTCTCCCGGTGAAAA 59.965 55.000 0.00 0.00 0.00 2.29
734 1214 1.118965 TGCTGTCTCTCCCGGTGAAA 61.119 55.000 0.00 0.00 0.00 2.69
735 1215 1.533033 TGCTGTCTCTCCCGGTGAA 60.533 57.895 0.00 0.00 0.00 3.18
736 1216 2.117423 TGCTGTCTCTCCCGGTGA 59.883 61.111 0.00 0.00 0.00 4.02
737 1217 2.262915 GTGCTGTCTCTCCCGGTG 59.737 66.667 0.00 0.00 0.00 4.94
738 1218 2.203640 TGTGCTGTCTCTCCCGGT 60.204 61.111 0.00 0.00 0.00 5.28
739 1219 2.219325 GAGTGTGCTGTCTCTCCCGG 62.219 65.000 0.00 0.00 0.00 5.73
740 1220 1.214062 GAGTGTGCTGTCTCTCCCG 59.786 63.158 0.00 0.00 0.00 5.14
741 1221 0.530288 GAGAGTGTGCTGTCTCTCCC 59.470 60.000 16.12 0.92 46.19 4.30
879 1365 1.960689 ACATTGTTTCCGACTTTGGGG 59.039 47.619 0.00 0.00 0.00 4.96
1167 1659 2.580601 GGCGTCCAGGGTGTACTGT 61.581 63.158 0.00 0.00 36.75 3.55
1290 1782 1.109920 GGATGCGAGAGAGGTAGGCA 61.110 60.000 0.00 0.00 38.09 4.75
1536 2028 3.838271 GAGATCTCCCGTGCGGCA 61.838 66.667 12.00 0.00 0.00 5.69
2538 3030 2.587247 GCTGAGCCCTGTGGAGTCA 61.587 63.158 0.00 0.00 0.00 3.41
2736 3228 1.971505 ATGATCGTGGGTGCATCCGT 61.972 55.000 12.39 0.00 37.00 4.69
3426 4069 6.640907 CCGTTTTCCATTAATTATAAGGCAGC 59.359 38.462 0.00 0.00 0.00 5.25
3449 4092 2.550855 CCATCACTATCCAATCCCACCG 60.551 54.545 0.00 0.00 0.00 4.94
3907 4550 2.158097 AGAATCCTGCCCTCCTATAGCA 60.158 50.000 0.00 0.00 34.79 3.49
4349 4998 9.673454 CACAAGTTGTCCATGATTATGATTATG 57.327 33.333 5.27 0.00 36.36 1.90
4355 5004 5.313520 TGCACAAGTTGTCCATGATTATG 57.686 39.130 5.27 0.00 0.00 1.90
4361 5010 5.313520 TGATTATGCACAAGTTGTCCATG 57.686 39.130 20.50 4.90 0.00 3.66
4380 5029 8.796475 GGCATCACACTGGTAAATAATAATGAT 58.204 33.333 0.00 0.00 0.00 2.45
4381 5030 7.998383 AGGCATCACACTGGTAAATAATAATGA 59.002 33.333 0.00 0.00 0.00 2.57
4382 5031 8.169977 AGGCATCACACTGGTAAATAATAATG 57.830 34.615 0.00 0.00 0.00 1.90
4383 5032 8.766994 AAGGCATCACACTGGTAAATAATAAT 57.233 30.769 0.00 0.00 0.00 1.28
4384 5033 8.588290 AAAGGCATCACACTGGTAAATAATAA 57.412 30.769 0.00 0.00 0.00 1.40
4387 5036 6.071616 GGAAAAGGCATCACACTGGTAAATAA 60.072 38.462 0.00 0.00 0.00 1.40
4390 5039 3.572255 GGAAAAGGCATCACACTGGTAAA 59.428 43.478 0.00 0.00 0.00 2.01
4395 5044 2.229784 GGAAGGAAAAGGCATCACACTG 59.770 50.000 0.00 0.00 0.00 3.66
4440 5089 0.040958 GCCAGCTGACGTTGAAACTG 60.041 55.000 17.39 0.00 0.00 3.16
4493 5142 8.696374 TGATGTACTTACTTCTCTAATCCCTTG 58.304 37.037 0.00 0.00 33.14 3.61
4581 5230 2.622942 GCAACTGTCATGAAGGGTTGAA 59.377 45.455 26.58 0.00 39.39 2.69
4765 5414 6.751888 GGTTTTGTAGGATGTGATAAATGCAC 59.248 38.462 0.00 0.00 36.81 4.57
5104 5753 4.957971 ACAAAGCTGTGAATTCGTATTCG 58.042 39.130 11.93 0.00 42.55 3.34
5221 5870 8.824756 ACAGAGAGGTAAAACTGTCATAGATA 57.175 34.615 0.00 0.00 38.95 1.98
5233 5882 9.702494 GCTAAAGTACTTAACAGAGAGGTAAAA 57.298 33.333 8.92 0.00 0.00 1.52
5282 5931 7.096065 GCTGTAAAATAAGCCAAAACAGAACAG 60.096 37.037 3.89 0.00 35.93 3.16
5477 6126 4.818534 TGCTAAGCAAAAAGTCAGACAG 57.181 40.909 2.66 0.00 34.76 3.51
5578 6227 4.978099 TGAAGAGGAAGAGCATTGTTTCT 58.022 39.130 0.00 0.00 0.00 2.52
5616 6265 6.631016 TCTTCGTGTATATTGCAAAGAGACT 58.369 36.000 1.71 0.00 29.32 3.24
5739 6388 4.015872 ACCACATATAATAAGGCACGGG 57.984 45.455 0.00 0.00 0.00 5.28
5884 6539 1.084370 GCGTCAGGTGTACATCCAGC 61.084 60.000 1.47 0.00 0.00 4.85
5934 6589 7.771183 TGGGAGCTTCATTTGTATTTTATGTC 58.229 34.615 0.00 0.00 0.00 3.06
5988 6643 4.080863 TCCCCTTCTCTAAAGACATTCTGC 60.081 45.833 0.00 0.00 0.00 4.26
5993 6648 5.313506 ACCTTTTCCCCTTCTCTAAAGACAT 59.686 40.000 0.00 0.00 0.00 3.06
6032 6687 2.636830 GCTACAGTGATGCCACATCTT 58.363 47.619 8.87 0.00 45.54 2.40
6047 6702 1.226745 CGACGGCCATAACGCTACA 60.227 57.895 2.24 0.00 34.00 2.74
6172 6952 6.102663 CAGACTCTTTATAACAGACCCAGTG 58.897 44.000 0.00 0.00 0.00 3.66
6191 6971 6.615726 TGGACTATTCCTAATTTAGCCAGACT 59.384 38.462 0.29 0.00 43.31 3.24
6245 7025 7.179160 TCAGATCTCAATTCAAACTCTAGACCA 59.821 37.037 0.00 0.00 0.00 4.02
6302 7082 9.256228 AGATTGAGAGACACTGGTACTTTATAA 57.744 33.333 0.00 0.00 0.00 0.98
6313 7093 6.272318 GGAGATAACAGATTGAGAGACACTG 58.728 44.000 0.00 0.00 35.14 3.66
6345 7125 6.590677 GGAGTAAAACACTGGTTAGAGATGAC 59.409 42.308 0.00 0.00 37.72 3.06
6470 7252 0.608582 CGTAGGGGATCGGGGAGTAG 60.609 65.000 0.00 0.00 0.00 2.57
6508 7290 1.871080 GGTCTACCGCCATGAAGATG 58.129 55.000 0.00 0.00 0.00 2.90
6657 7439 6.402222 ACTGAGTCATTGAATAAGAGTCCAC 58.598 40.000 5.49 0.00 32.13 4.02
6725 7507 4.142708 CCGTGACTGCTATTACAAAATGCA 60.143 41.667 0.00 0.00 32.19 3.96
6746 7528 2.797786 TGTTAGGAAAACCAATCCCCG 58.202 47.619 0.00 0.00 37.71 5.73
6804 7586 2.159327 AGGCTCAAATTTGCAGTTGC 57.841 45.000 13.54 11.13 42.50 4.17
6810 7592 6.199937 TCTAATCAGAAGGCTCAAATTTGC 57.800 37.500 13.54 2.53 0.00 3.68
6877 7659 3.007723 ACAGCTGATGTATGGATGCCTAG 59.992 47.826 23.35 0.00 41.60 3.02
6985 7770 1.334160 TCTTTACACTCCTGGACGCA 58.666 50.000 0.00 0.00 0.00 5.24
6997 7782 9.733556 TGTTAAATAGCTCTCCAAATCTTTACA 57.266 29.630 0.00 0.00 0.00 2.41
7074 7861 9.624697 TCACTAGAAACAAAATAATGCATGAAC 57.375 29.630 0.00 0.00 0.00 3.18
7101 7888 4.142293 GCCTTCCCTTTATCTCTTTTGCTG 60.142 45.833 0.00 0.00 0.00 4.41
7219 8006 8.725405 TTCCTAAAATATGACGCTATTTGTGA 57.275 30.769 0.62 0.00 32.88 3.58
7248 8038 8.090788 TGGAGGGAGTATAATATAATGAAGCC 57.909 38.462 0.00 0.00 0.00 4.35
7249 8039 9.771534 GATGGAGGGAGTATAATATAATGAAGC 57.228 37.037 0.00 0.00 0.00 3.86
7285 8075 5.682943 AACATAGCTTGCAAAAACGTCTA 57.317 34.783 0.00 0.00 0.00 2.59
7616 8406 8.303876 ACACGAAAACATGCTAAAAATTCCTAT 58.696 29.630 0.00 0.00 0.00 2.57
7719 8509 8.319057 TCCCTCTGTAAAGAAATATAAGAGCA 57.681 34.615 0.00 0.00 0.00 4.26
7720 8510 8.425703 ACTCCCTCTGTAAAGAAATATAAGAGC 58.574 37.037 0.00 0.00 0.00 4.09
7798 8603 4.142227 CCCTCCGTCCCGTAATATAAGATG 60.142 50.000 0.00 0.00 0.00 2.90
7810 8615 2.119655 CACTACTCCCTCCGTCCCG 61.120 68.421 0.00 0.00 0.00 5.14
7828 8633 6.071108 TGCCAGGAGAACTAAGAGATATATGC 60.071 42.308 0.00 0.00 0.00 3.14
7927 8732 5.823570 TCCTACTGCTCATACTAGAGTCAAC 59.176 44.000 0.00 0.00 37.94 3.18
7928 8733 6.002653 TCCTACTGCTCATACTAGAGTCAA 57.997 41.667 0.00 0.00 37.94 3.18
7995 8800 6.934083 TGACACTGAGTATATTGCAACAGAAA 59.066 34.615 16.69 0.00 0.00 2.52
8046 8851 9.403583 TCATTTATTTATTCACAACTACTCCCC 57.596 33.333 0.00 0.00 0.00 4.81
8144 8949 9.766277 CAAGAGATTGAACTTTTAAGCACTATC 57.234 33.333 0.00 0.00 0.00 2.08
8206 9011 5.954150 ACATAGATGAAAGGCAATCAAGGTT 59.046 36.000 0.00 0.00 0.00 3.50
8246 9051 4.087892 CCCTCACCAGGACAGGCG 62.088 72.222 0.00 0.00 43.65 5.52
8456 9261 0.533755 GCTTGCCATATCAGCTCCGT 60.534 55.000 0.00 0.00 0.00 4.69
8536 9342 0.809385 TTCTCACGAACTAGGCTCCG 59.191 55.000 0.00 0.00 0.00 4.63
8834 9641 2.600792 GCAAGAGACTGCGACAAAAGTG 60.601 50.000 0.00 0.00 31.50 3.16
8870 9677 0.106708 TATGCCTGGCTCGGATGAAC 59.893 55.000 21.03 0.00 0.00 3.18
8954 9761 8.246180 TGAATGAAGAAAGGCAGTAATTTCATC 58.754 33.333 0.00 0.00 37.78 2.92
9063 9882 0.179000 ATGAGGCTTGGCGTCCTTAG 59.821 55.000 9.23 0.00 41.92 2.18
9070 9889 1.532505 CGAATCAAATGAGGCTTGGCG 60.533 52.381 0.00 0.00 0.00 5.69
9124 9943 2.434428 TCGCCCCTTCGATCTACTATC 58.566 52.381 0.00 0.00 33.02 2.08
9125 9944 2.581216 TCGCCCCTTCGATCTACTAT 57.419 50.000 0.00 0.00 33.02 2.12
9126 9945 2.158711 TCTTCGCCCCTTCGATCTACTA 60.159 50.000 0.00 0.00 38.37 1.82
9127 9946 1.033574 CTTCGCCCCTTCGATCTACT 58.966 55.000 0.00 0.00 38.37 2.57
9134 10117 2.033194 GGTTGTCTTCGCCCCTTCG 61.033 63.158 0.00 0.00 0.00 3.79
9166 10149 9.442047 GATGGATACTCATTTATTAGAACAGGG 57.558 37.037 0.00 0.00 37.61 4.45
9169 10152 9.476202 CGTGATGGATACTCATTTATTAGAACA 57.524 33.333 0.00 0.00 37.61 3.18
9170 10153 9.477484 ACGTGATGGATACTCATTTATTAGAAC 57.523 33.333 0.00 0.00 37.61 3.01
9188 10171 6.506603 AAGGTATCCTCTCCATACGTGATGG 61.507 48.000 14.37 14.37 44.42 3.51
9189 10172 4.082845 AGGTATCCTCTCCATACGTGATG 58.917 47.826 0.00 0.00 35.05 3.07
9221 10204 7.384387 CGGGCCACTTATCTAGTTTATTAGAAC 59.616 40.741 4.39 0.00 33.85 3.01
9267 10250 2.125350 GAGTTGCTCGCCCTGAGG 60.125 66.667 0.00 0.00 45.38 3.86
9269 10252 1.830587 ATGTGAGTTGCTCGCCCTGA 61.831 55.000 7.16 0.00 39.93 3.86
9270 10253 1.376424 ATGTGAGTTGCTCGCCCTG 60.376 57.895 7.16 0.00 39.93 4.45
9271 10254 1.376424 CATGTGAGTTGCTCGCCCT 60.376 57.895 7.16 0.00 39.93 5.19
9272 10255 2.401766 CCATGTGAGTTGCTCGCCC 61.402 63.158 7.16 0.00 39.93 6.13
9273 10256 0.955428 TTCCATGTGAGTTGCTCGCC 60.955 55.000 7.16 0.00 39.93 5.54
9274 10257 0.874390 TTTCCATGTGAGTTGCTCGC 59.126 50.000 3.03 3.03 40.91 5.03
9275 10258 3.624326 TTTTTCCATGTGAGTTGCTCG 57.376 42.857 0.00 0.00 32.35 5.03
9276 10259 5.125100 TGATTTTTCCATGTGAGTTGCTC 57.875 39.130 0.00 0.00 0.00 4.26
9277 10260 5.733620 ATGATTTTTCCATGTGAGTTGCT 57.266 34.783 0.00 0.00 0.00 3.91
9278 10261 6.595794 CAAATGATTTTTCCATGTGAGTTGC 58.404 36.000 0.00 0.00 32.34 4.17
9279 10262 6.203145 TGCAAATGATTTTTCCATGTGAGTTG 59.797 34.615 0.00 0.00 32.34 3.16
9280 10263 6.203338 GTGCAAATGATTTTTCCATGTGAGTT 59.797 34.615 0.00 0.00 32.34 3.01
9281 10264 5.697633 GTGCAAATGATTTTTCCATGTGAGT 59.302 36.000 0.00 0.00 32.34 3.41
9282 10265 5.121142 GGTGCAAATGATTTTTCCATGTGAG 59.879 40.000 0.00 0.00 32.34 3.51
9283 10266 4.996122 GGTGCAAATGATTTTTCCATGTGA 59.004 37.500 0.00 0.00 32.34 3.58
9284 10267 4.755629 TGGTGCAAATGATTTTTCCATGTG 59.244 37.500 0.00 0.00 33.47 3.21
9285 10268 4.970711 TGGTGCAAATGATTTTTCCATGT 58.029 34.783 0.00 0.00 0.00 3.21
9286 10269 5.239351 TCTGGTGCAAATGATTTTTCCATG 58.761 37.500 0.00 0.00 0.00 3.66
9287 10270 5.486735 TCTGGTGCAAATGATTTTTCCAT 57.513 34.783 0.00 0.00 0.00 3.41
9288 10271 4.952071 TCTGGTGCAAATGATTTTTCCA 57.048 36.364 0.00 0.00 0.00 3.53
9289 10272 5.055812 TGTTCTGGTGCAAATGATTTTTCC 58.944 37.500 0.00 0.00 0.00 3.13
9290 10273 6.790285 ATGTTCTGGTGCAAATGATTTTTC 57.210 33.333 0.00 0.00 0.00 2.29
9291 10274 7.173047 GGTTATGTTCTGGTGCAAATGATTTTT 59.827 33.333 0.00 0.00 0.00 1.94
9292 10275 6.650390 GGTTATGTTCTGGTGCAAATGATTTT 59.350 34.615 0.00 0.00 0.00 1.82
9293 10276 6.165577 GGTTATGTTCTGGTGCAAATGATTT 58.834 36.000 0.00 0.00 0.00 2.17
9294 10277 5.245751 TGGTTATGTTCTGGTGCAAATGATT 59.754 36.000 0.00 0.00 0.00 2.57
9295 10278 4.771577 TGGTTATGTTCTGGTGCAAATGAT 59.228 37.500 0.00 0.00 0.00 2.45
9296 10279 4.148079 TGGTTATGTTCTGGTGCAAATGA 58.852 39.130 0.00 0.00 0.00 2.57
9297 10280 4.517952 TGGTTATGTTCTGGTGCAAATG 57.482 40.909 0.00 0.00 0.00 2.32
9298 10281 5.543507 TTTGGTTATGTTCTGGTGCAAAT 57.456 34.783 0.00 0.00 0.00 2.32
9299 10282 5.112686 GTTTTGGTTATGTTCTGGTGCAAA 58.887 37.500 0.00 0.00 0.00 3.68
9300 10283 4.160439 TGTTTTGGTTATGTTCTGGTGCAA 59.840 37.500 0.00 0.00 0.00 4.08
9301 10284 3.701542 TGTTTTGGTTATGTTCTGGTGCA 59.298 39.130 0.00 0.00 0.00 4.57
9302 10285 4.314740 TGTTTTGGTTATGTTCTGGTGC 57.685 40.909 0.00 0.00 0.00 5.01
9303 10286 6.591834 TGTTTTGTTTTGGTTATGTTCTGGTG 59.408 34.615 0.00 0.00 0.00 4.17
9304 10287 6.702329 TGTTTTGTTTTGGTTATGTTCTGGT 58.298 32.000 0.00 0.00 0.00 4.00
9305 10288 7.602517 TTGTTTTGTTTTGGTTATGTTCTGG 57.397 32.000 0.00 0.00 0.00 3.86
9306 10289 8.877779 TGATTGTTTTGTTTTGGTTATGTTCTG 58.122 29.630 0.00 0.00 0.00 3.02
9307 10290 8.878769 GTGATTGTTTTGTTTTGGTTATGTTCT 58.121 29.630 0.00 0.00 0.00 3.01
9308 10291 8.660373 TGTGATTGTTTTGTTTTGGTTATGTTC 58.340 29.630 0.00 0.00 0.00 3.18
9309 10292 8.553459 TGTGATTGTTTTGTTTTGGTTATGTT 57.447 26.923 0.00 0.00 0.00 2.71
9310 10293 8.553459 TTGTGATTGTTTTGTTTTGGTTATGT 57.447 26.923 0.00 0.00 0.00 2.29
9311 10294 8.121708 CCTTGTGATTGTTTTGTTTTGGTTATG 58.878 33.333 0.00 0.00 0.00 1.90
9312 10295 8.043710 TCCTTGTGATTGTTTTGTTTTGGTTAT 58.956 29.630 0.00 0.00 0.00 1.89
9313 10296 7.386851 TCCTTGTGATTGTTTTGTTTTGGTTA 58.613 30.769 0.00 0.00 0.00 2.85
9314 10297 6.234177 TCCTTGTGATTGTTTTGTTTTGGTT 58.766 32.000 0.00 0.00 0.00 3.67
9315 10298 5.799213 TCCTTGTGATTGTTTTGTTTTGGT 58.201 33.333 0.00 0.00 0.00 3.67
9316 10299 6.734104 TTCCTTGTGATTGTTTTGTTTTGG 57.266 33.333 0.00 0.00 0.00 3.28
9317 10300 7.579726 TGTTTCCTTGTGATTGTTTTGTTTTG 58.420 30.769 0.00 0.00 0.00 2.44
9318 10301 7.736447 TGTTTCCTTGTGATTGTTTTGTTTT 57.264 28.000 0.00 0.00 0.00 2.43
9319 10302 7.390162 ACATGTTTCCTTGTGATTGTTTTGTTT 59.610 29.630 0.00 0.00 0.00 2.83
9320 10303 6.878389 ACATGTTTCCTTGTGATTGTTTTGTT 59.122 30.769 0.00 0.00 0.00 2.83
9321 10304 6.405538 ACATGTTTCCTTGTGATTGTTTTGT 58.594 32.000 0.00 0.00 0.00 2.83
9322 10305 6.907206 ACATGTTTCCTTGTGATTGTTTTG 57.093 33.333 0.00 0.00 0.00 2.44
9323 10306 7.390162 ACAAACATGTTTCCTTGTGATTGTTTT 59.610 29.630 20.85 0.00 34.75 2.43
9324 10307 6.878389 ACAAACATGTTTCCTTGTGATTGTTT 59.122 30.769 20.85 0.00 36.72 2.83
9325 10308 6.405538 ACAAACATGTTTCCTTGTGATTGTT 58.594 32.000 20.85 0.00 31.13 2.83
9326 10309 5.976458 ACAAACATGTTTCCTTGTGATTGT 58.024 33.333 20.85 9.81 30.72 2.71
9327 10310 6.977502 TGTACAAACATGTTTCCTTGTGATTG 59.022 34.615 20.85 9.18 34.08 2.67
9328 10311 6.978080 GTGTACAAACATGTTTCCTTGTGATT 59.022 34.615 20.85 0.00 38.08 2.57
9329 10312 6.321181 AGTGTACAAACATGTTTCCTTGTGAT 59.679 34.615 20.85 4.02 38.08 3.06
9330 10313 5.650266 AGTGTACAAACATGTTTCCTTGTGA 59.350 36.000 20.85 5.86 38.08 3.58
9331 10314 5.890334 AGTGTACAAACATGTTTCCTTGTG 58.110 37.500 20.85 12.01 38.08 3.33
9332 10315 6.329496 CAAGTGTACAAACATGTTTCCTTGT 58.671 36.000 20.85 17.96 38.08 3.16
9333 10316 5.748152 CCAAGTGTACAAACATGTTTCCTTG 59.252 40.000 20.85 21.74 38.08 3.61
9334 10317 5.420739 ACCAAGTGTACAAACATGTTTCCTT 59.579 36.000 20.85 13.73 38.08 3.36
9335 10318 4.953579 ACCAAGTGTACAAACATGTTTCCT 59.046 37.500 20.85 11.40 38.08 3.36
9336 10319 5.257082 ACCAAGTGTACAAACATGTTTCC 57.743 39.130 20.85 12.05 38.08 3.13
9337 10320 6.560711 AGAACCAAGTGTACAAACATGTTTC 58.439 36.000 20.85 10.79 38.08 2.78
9338 10321 6.524101 AGAACCAAGTGTACAAACATGTTT 57.476 33.333 18.13 18.13 38.08 2.83
9339 10322 6.600032 TGTAGAACCAAGTGTACAAACATGTT 59.400 34.615 4.92 4.92 38.08 2.71
9340 10323 6.116806 TGTAGAACCAAGTGTACAAACATGT 58.883 36.000 0.00 0.00 38.08 3.21
9341 10324 6.612247 TGTAGAACCAAGTGTACAAACATG 57.388 37.500 0.00 0.00 38.08 3.21
9342 10325 5.238650 GCTGTAGAACCAAGTGTACAAACAT 59.761 40.000 0.00 0.00 38.08 2.71
9343 10326 4.573201 GCTGTAGAACCAAGTGTACAAACA 59.427 41.667 0.00 0.00 0.00 2.83
9344 10327 4.024302 GGCTGTAGAACCAAGTGTACAAAC 60.024 45.833 0.00 0.00 0.00 2.93
9345 10328 4.131596 GGCTGTAGAACCAAGTGTACAAA 58.868 43.478 0.00 0.00 0.00 2.83
9346 10329 3.134985 TGGCTGTAGAACCAAGTGTACAA 59.865 43.478 0.00 0.00 31.46 2.41
9347 10330 2.701423 TGGCTGTAGAACCAAGTGTACA 59.299 45.455 0.00 0.00 31.46 2.90
9348 10331 3.396260 TGGCTGTAGAACCAAGTGTAC 57.604 47.619 0.00 0.00 31.46 2.90
9349 10332 3.735591 GTTGGCTGTAGAACCAAGTGTA 58.264 45.455 0.00 0.00 46.29 2.90
9350 10333 2.572290 GTTGGCTGTAGAACCAAGTGT 58.428 47.619 0.00 0.00 46.29 3.55
9351 10334 1.531149 CGTTGGCTGTAGAACCAAGTG 59.469 52.381 0.00 0.00 46.29 3.16
9352 10335 1.140252 ACGTTGGCTGTAGAACCAAGT 59.860 47.619 0.00 0.00 46.29 3.16
9353 10336 1.878953 ACGTTGGCTGTAGAACCAAG 58.121 50.000 0.00 0.00 46.29 3.61
9354 10337 3.592059 GATACGTTGGCTGTAGAACCAA 58.408 45.455 0.00 0.00 43.59 3.67
9355 10338 2.093869 GGATACGTTGGCTGTAGAACCA 60.094 50.000 0.00 0.00 0.00 3.67
9356 10339 2.093869 TGGATACGTTGGCTGTAGAACC 60.094 50.000 0.00 0.00 42.51 3.62
9357 10340 2.928116 GTGGATACGTTGGCTGTAGAAC 59.072 50.000 0.00 0.00 42.51 3.01
9358 10341 2.563620 TGTGGATACGTTGGCTGTAGAA 59.436 45.455 0.00 0.00 42.51 2.10
9359 10342 2.172679 TGTGGATACGTTGGCTGTAGA 58.827 47.619 0.00 0.00 42.51 2.59
9360 10343 2.665649 TGTGGATACGTTGGCTGTAG 57.334 50.000 0.00 0.00 42.51 2.74
9361 10344 2.354303 CCTTGTGGATACGTTGGCTGTA 60.354 50.000 0.00 0.00 42.51 2.74
9362 10345 1.610624 CCTTGTGGATACGTTGGCTGT 60.611 52.381 0.00 0.00 42.51 4.40
9363 10346 1.086696 CCTTGTGGATACGTTGGCTG 58.913 55.000 0.00 0.00 42.51 4.85
9364 10347 0.690762 ACCTTGTGGATACGTTGGCT 59.309 50.000 0.00 0.00 42.51 4.75
9365 10348 2.277084 CTACCTTGTGGATACGTTGGC 58.723 52.381 0.00 0.00 42.51 4.52
9366 10349 2.277084 GCTACCTTGTGGATACGTTGG 58.723 52.381 0.00 0.00 42.51 3.77
9367 10350 2.277084 GGCTACCTTGTGGATACGTTG 58.723 52.381 0.00 0.00 42.51 4.10
9368 10351 1.208776 GGGCTACCTTGTGGATACGTT 59.791 52.381 0.00 0.00 42.51 3.99
9369 10352 0.828677 GGGCTACCTTGTGGATACGT 59.171 55.000 0.00 0.00 42.51 3.57
9370 10353 3.680842 GGGCTACCTTGTGGATACG 57.319 57.895 0.00 0.00 42.51 3.06
9381 10364 1.687660 GCTTAGGACTACAGGGCTACC 59.312 57.143 0.00 0.00 0.00 3.18
9382 10365 2.668625 AGCTTAGGACTACAGGGCTAC 58.331 52.381 0.00 0.00 0.00 3.58
9383 10366 4.743705 ATAGCTTAGGACTACAGGGCTA 57.256 45.455 0.00 0.00 35.71 3.93
9384 10367 3.621682 ATAGCTTAGGACTACAGGGCT 57.378 47.619 0.00 0.00 0.00 5.19
9385 10368 4.409187 AGTATAGCTTAGGACTACAGGGC 58.591 47.826 0.00 0.00 0.00 5.19
9386 10369 6.540995 TGTAGTATAGCTTAGGACTACAGGG 58.459 44.000 18.39 0.00 45.72 4.45
9390 10373 8.374743 AGGTAGTGTAGTATAGCTTAGGACTAC 58.625 40.741 15.10 15.10 42.96 2.73
9391 10374 8.503428 AGGTAGTGTAGTATAGCTTAGGACTA 57.497 38.462 0.00 0.00 0.00 2.59
9392 10375 7.293062 AGAGGTAGTGTAGTATAGCTTAGGACT 59.707 40.741 0.00 0.00 30.22 3.85
9393 10376 7.388500 CAGAGGTAGTGTAGTATAGCTTAGGAC 59.612 44.444 0.00 0.00 30.22 3.85
9394 10377 7.291885 TCAGAGGTAGTGTAGTATAGCTTAGGA 59.708 40.741 0.00 0.00 30.22 2.94
9395 10378 7.451732 TCAGAGGTAGTGTAGTATAGCTTAGG 58.548 42.308 0.00 0.00 30.22 2.69
9396 10379 9.509956 AATCAGAGGTAGTGTAGTATAGCTTAG 57.490 37.037 0.00 0.00 30.22 2.18
9397 10380 9.504708 GAATCAGAGGTAGTGTAGTATAGCTTA 57.495 37.037 0.00 0.00 30.22 3.09
9398 10381 8.221944 AGAATCAGAGGTAGTGTAGTATAGCTT 58.778 37.037 0.00 0.00 30.22 3.74
9399 10382 7.751646 AGAATCAGAGGTAGTGTAGTATAGCT 58.248 38.462 0.00 0.00 32.64 3.32
9400 10383 7.662258 TGAGAATCAGAGGTAGTGTAGTATAGC 59.338 40.741 0.00 0.00 42.56 2.97
9418 10401 7.624974 GCAGAATGACGAAATTTCTGAGAATCA 60.625 37.037 15.92 9.66 45.88 2.57
9419 10402 6.686253 GCAGAATGACGAAATTTCTGAGAATC 59.314 38.462 15.92 7.42 45.88 2.52
9420 10403 6.373774 AGCAGAATGACGAAATTTCTGAGAAT 59.626 34.615 15.92 0.74 45.88 2.40
9421 10404 5.702670 AGCAGAATGACGAAATTTCTGAGAA 59.297 36.000 15.92 0.00 45.88 2.87
9422 10405 5.240891 AGCAGAATGACGAAATTTCTGAGA 58.759 37.500 15.92 0.00 45.88 3.27
9423 10406 5.447010 GGAGCAGAATGACGAAATTTCTGAG 60.447 44.000 15.92 3.56 45.88 3.35
9424 10407 4.393062 GGAGCAGAATGACGAAATTTCTGA 59.607 41.667 15.92 0.38 45.88 3.27
9425 10408 4.154737 TGGAGCAGAATGACGAAATTTCTG 59.845 41.667 15.92 11.53 45.80 3.02
9426 10409 4.154918 GTGGAGCAGAATGACGAAATTTCT 59.845 41.667 15.92 3.50 39.69 2.52
9427 10410 4.406943 GTGGAGCAGAATGACGAAATTTC 58.593 43.478 8.20 8.20 39.69 2.17
9428 10411 3.191371 GGTGGAGCAGAATGACGAAATTT 59.809 43.478 0.00 0.00 39.69 1.82
9429 10412 2.749621 GGTGGAGCAGAATGACGAAATT 59.250 45.455 0.00 0.00 39.69 1.82
9430 10413 2.290260 TGGTGGAGCAGAATGACGAAAT 60.290 45.455 0.00 0.00 39.69 2.17
9431 10414 1.071542 TGGTGGAGCAGAATGACGAAA 59.928 47.619 0.00 0.00 39.69 3.46
9432 10415 0.684535 TGGTGGAGCAGAATGACGAA 59.315 50.000 0.00 0.00 39.69 3.85
9433 10416 0.684535 TTGGTGGAGCAGAATGACGA 59.315 50.000 0.00 0.00 39.69 4.20
9434 10417 1.522668 TTTGGTGGAGCAGAATGACG 58.477 50.000 0.00 0.00 39.69 4.35


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.