Multiple sequence alignment - TraesCS4D01G180100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G180100 chr4D 100.000 2885 0 0 1 2885 313887431 313884547 0.000000e+00 5328.0
1 TraesCS4D01G180100 chr4D 98.893 542 6 0 2344 2885 355818481 355817940 0.000000e+00 968.0
2 TraesCS4D01G180100 chr4D 88.085 235 22 5 2106 2335 139444740 139444973 1.020000e-69 274.0
3 TraesCS4D01G180100 chr4B 89.928 1678 57 19 171 1814 391157110 391158709 0.000000e+00 2060.0
4 TraesCS4D01G180100 chr4B 87.162 296 27 4 1816 2111 391160799 391161083 2.770000e-85 326.0
5 TraesCS4D01G180100 chr4A 92.410 1357 58 10 788 2111 162813141 162814485 0.000000e+00 1893.0
6 TraesCS4D01G180100 chr4A 93.633 267 15 1 184 450 162812643 162812907 5.790000e-107 398.0
7 TraesCS4D01G180100 chr4A 90.393 229 8 1 518 746 162812927 162813141 3.640000e-74 289.0
8 TraesCS4D01G180100 chr2D 97.606 543 13 0 2343 2885 568249080 568248538 0.000000e+00 931.0
9 TraesCS4D01G180100 chr2D 88.793 232 20 5 2109 2335 312504100 312503870 2.190000e-71 279.0
10 TraesCS4D01G180100 chr2D 81.743 241 41 3 1859 2098 591026308 591026546 6.310000e-47 198.0
11 TraesCS4D01G180100 chr2D 81.304 230 38 4 1865 2093 566836769 566836994 6.350000e-42 182.0
12 TraesCS4D01G180100 chr2D 88.148 135 9 4 37 166 337502520 337502652 1.380000e-33 154.0
13 TraesCS4D01G180100 chr2D 87.407 135 15 2 38 171 648129465 648129598 1.380000e-33 154.0
14 TraesCS4D01G180100 chr3A 96.858 541 17 0 2345 2885 33139895 33140435 0.000000e+00 905.0
15 TraesCS4D01G180100 chr7B 96.685 543 17 1 2343 2885 697093252 697092711 0.000000e+00 902.0
16 TraesCS4D01G180100 chr7B 93.773 546 29 5 2343 2885 124130192 124130735 0.000000e+00 815.0
17 TraesCS4D01G180100 chr7B 81.545 233 34 8 1866 2095 708834618 708834844 1.770000e-42 183.0
18 TraesCS4D01G180100 chr7B 90.164 122 7 2 38 155 221896046 221895926 1.380000e-33 154.0
19 TraesCS4D01G180100 chr7A 96.685 543 17 1 2343 2885 211723899 211723358 0.000000e+00 902.0
20 TraesCS4D01G180100 chr7A 92.647 544 36 2 2345 2885 547149930 547149388 0.000000e+00 780.0
21 TraesCS4D01G180100 chr6D 97.009 535 9 3 2345 2879 451770619 451770092 0.000000e+00 893.0
22 TraesCS4D01G180100 chr6D 88.511 235 21 5 2106 2335 304476343 304476576 2.190000e-71 279.0
23 TraesCS4D01G180100 chr6D 88.136 236 21 6 2106 2335 181640788 181641022 1.020000e-69 274.0
24 TraesCS4D01G180100 chr6B 93.692 539 28 6 2345 2880 259073194 259072659 0.000000e+00 802.0
25 TraesCS4D01G180100 chr6B 86.232 138 14 2 38 171 570795935 570796071 8.330000e-31 145.0
26 TraesCS4D01G180100 chr3D 87.917 240 21 6 2106 2339 177060183 177060420 2.830000e-70 276.0
27 TraesCS4D01G180100 chr3D 84.656 189 22 7 1910 2095 502133586 502133402 6.350000e-42 182.0
28 TraesCS4D01G180100 chr3D 84.828 145 16 3 31 171 437702223 437702365 1.080000e-29 141.0
29 TraesCS4D01G180100 chr3D 100.000 28 0 0 1210 1237 504003838 504003811 5.000000e-03 52.8
30 TraesCS4D01G180100 chr7D 88.546 227 25 1 2109 2335 117929382 117929157 1.020000e-69 274.0
31 TraesCS4D01G180100 chr5A 88.362 232 21 5 2109 2335 172543289 172543059 1.020000e-69 274.0
32 TraesCS4D01G180100 chr1D 88.085 235 20 7 2106 2335 196701219 196701450 3.660000e-69 272.0
33 TraesCS4D01G180100 chr5D 87.764 237 21 6 2106 2335 67716237 67716472 1.320000e-68 270.0
34 TraesCS4D01G180100 chr5B 83.981 206 26 6 1890 2093 362839663 362839863 1.060000e-44 191.0
35 TraesCS4D01G180100 chr6A 82.039 206 35 2 1888 2092 154046508 154046712 1.060000e-39 174.0
36 TraesCS4D01G180100 chr6A 77.826 230 38 11 1865 2087 441490071 441489848 2.330000e-26 130.0
37 TraesCS4D01G180100 chr1B 87.943 141 8 6 37 171 250364401 250364264 1.070000e-34 158.0
38 TraesCS4D01G180100 chr2B 88.060 134 10 3 38 166 40526650 40526518 1.380000e-33 154.0
39 TraesCS4D01G180100 chr2B 86.331 139 13 3 38 172 372225953 372225817 2.320000e-31 147.0
40 TraesCS4D01G180100 chr1A 87.143 140 13 2 38 173 100709904 100709766 1.380000e-33 154.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G180100 chr4D 313884547 313887431 2884 True 5328 5328 100.000000 1 2885 1 chr4D.!!$R1 2884
1 TraesCS4D01G180100 chr4D 355817940 355818481 541 True 968 968 98.893000 2344 2885 1 chr4D.!!$R2 541
2 TraesCS4D01G180100 chr4B 391157110 391161083 3973 False 1193 2060 88.545000 171 2111 2 chr4B.!!$F1 1940
3 TraesCS4D01G180100 chr4A 162812643 162814485 1842 False 860 1893 92.145333 184 2111 3 chr4A.!!$F1 1927
4 TraesCS4D01G180100 chr2D 568248538 568249080 542 True 931 931 97.606000 2343 2885 1 chr2D.!!$R2 542
5 TraesCS4D01G180100 chr3A 33139895 33140435 540 False 905 905 96.858000 2345 2885 1 chr3A.!!$F1 540
6 TraesCS4D01G180100 chr7B 697092711 697093252 541 True 902 902 96.685000 2343 2885 1 chr7B.!!$R2 542
7 TraesCS4D01G180100 chr7B 124130192 124130735 543 False 815 815 93.773000 2343 2885 1 chr7B.!!$F1 542
8 TraesCS4D01G180100 chr7A 211723358 211723899 541 True 902 902 96.685000 2343 2885 1 chr7A.!!$R1 542
9 TraesCS4D01G180100 chr7A 547149388 547149930 542 True 780 780 92.647000 2345 2885 1 chr7A.!!$R2 540
10 TraesCS4D01G180100 chr6D 451770092 451770619 527 True 893 893 97.009000 2345 2879 1 chr6D.!!$R1 534
11 TraesCS4D01G180100 chr6B 259072659 259073194 535 True 802 802 93.692000 2345 2880 1 chr6B.!!$R1 535

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
279 280 0.036875 AGCAGGCACTTTCCTACCAC 59.963 55.0 0.0 0.0 34.6 4.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2140 4292 0.254747 CATCCCCGCCTCACCTAAAA 59.745 55.0 0.0 0.0 0.0 1.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.683581 GTGTCTTTGGCGATGCTTC 57.316 52.632 0.00 0.00 0.00 3.86
28 29 3.918220 GATGCTTCGACTGCGCGG 61.918 66.667 16.39 16.39 37.46 6.46
41 42 3.467226 CGCGGGGTGGAGGTGTAT 61.467 66.667 0.00 0.00 0.00 2.29
42 43 2.129146 CGCGGGGTGGAGGTGTATA 61.129 63.158 0.00 0.00 0.00 1.47
43 44 1.469335 CGCGGGGTGGAGGTGTATAT 61.469 60.000 0.00 0.00 0.00 0.86
44 45 0.763035 GCGGGGTGGAGGTGTATATT 59.237 55.000 0.00 0.00 0.00 1.28
45 46 1.542547 GCGGGGTGGAGGTGTATATTG 60.543 57.143 0.00 0.00 0.00 1.90
46 47 1.766496 CGGGGTGGAGGTGTATATTGT 59.234 52.381 0.00 0.00 0.00 2.71
47 48 2.484770 CGGGGTGGAGGTGTATATTGTG 60.485 54.545 0.00 0.00 0.00 3.33
48 49 2.508300 GGGGTGGAGGTGTATATTGTGT 59.492 50.000 0.00 0.00 0.00 3.72
49 50 3.433173 GGGGTGGAGGTGTATATTGTGTC 60.433 52.174 0.00 0.00 0.00 3.67
50 51 3.454812 GGGTGGAGGTGTATATTGTGTCT 59.545 47.826 0.00 0.00 0.00 3.41
51 52 4.080526 GGGTGGAGGTGTATATTGTGTCTT 60.081 45.833 0.00 0.00 0.00 3.01
52 53 4.876107 GGTGGAGGTGTATATTGTGTCTTG 59.124 45.833 0.00 0.00 0.00 3.02
53 54 4.876107 GTGGAGGTGTATATTGTGTCTTGG 59.124 45.833 0.00 0.00 0.00 3.61
54 55 4.080582 TGGAGGTGTATATTGTGTCTTGGG 60.081 45.833 0.00 0.00 0.00 4.12
55 56 3.877508 GAGGTGTATATTGTGTCTTGGGC 59.122 47.826 0.00 0.00 0.00 5.36
56 57 2.949644 GGTGTATATTGTGTCTTGGGCC 59.050 50.000 0.00 0.00 0.00 5.80
57 58 2.949644 GTGTATATTGTGTCTTGGGCCC 59.050 50.000 17.59 17.59 0.00 5.80
58 59 2.578480 TGTATATTGTGTCTTGGGCCCA 59.422 45.455 24.45 24.45 0.00 5.36
59 60 2.143876 ATATTGTGTCTTGGGCCCAC 57.856 50.000 28.70 14.93 0.00 4.61
60 61 0.039035 TATTGTGTCTTGGGCCCACC 59.961 55.000 28.70 16.48 40.81 4.61
61 62 1.729267 ATTGTGTCTTGGGCCCACCT 61.729 55.000 28.70 0.00 41.11 4.00
62 63 2.034221 GTGTCTTGGGCCCACCTC 59.966 66.667 28.70 17.85 41.11 3.85
63 64 3.256960 TGTCTTGGGCCCACCTCC 61.257 66.667 28.70 13.64 41.11 4.30
64 65 2.936032 GTCTTGGGCCCACCTCCT 60.936 66.667 28.70 0.00 41.11 3.69
65 66 1.615424 GTCTTGGGCCCACCTCCTA 60.615 63.158 28.70 7.92 41.11 2.94
66 67 1.162329 TCTTGGGCCCACCTCCTAA 59.838 57.895 28.70 7.00 41.11 2.69
67 68 0.253630 TCTTGGGCCCACCTCCTAAT 60.254 55.000 28.70 0.00 41.11 1.73
68 69 0.631212 CTTGGGCCCACCTCCTAATT 59.369 55.000 28.70 0.00 41.11 1.40
69 70 0.629058 TTGGGCCCACCTCCTAATTC 59.371 55.000 28.70 0.00 41.11 2.17
70 71 0.253630 TGGGCCCACCTCCTAATTCT 60.254 55.000 24.45 0.00 41.11 2.40
71 72 0.474614 GGGCCCACCTCCTAATTCTC 59.525 60.000 19.95 0.00 35.85 2.87
72 73 1.512735 GGCCCACCTCCTAATTCTCT 58.487 55.000 0.00 0.00 0.00 3.10
73 74 1.847088 GGCCCACCTCCTAATTCTCTT 59.153 52.381 0.00 0.00 0.00 2.85
74 75 2.422093 GGCCCACCTCCTAATTCTCTTG 60.422 54.545 0.00 0.00 0.00 3.02
75 76 2.239907 GCCCACCTCCTAATTCTCTTGT 59.760 50.000 0.00 0.00 0.00 3.16
76 77 3.454812 GCCCACCTCCTAATTCTCTTGTA 59.545 47.826 0.00 0.00 0.00 2.41
77 78 4.103311 GCCCACCTCCTAATTCTCTTGTAT 59.897 45.833 0.00 0.00 0.00 2.29
78 79 5.307196 GCCCACCTCCTAATTCTCTTGTATA 59.693 44.000 0.00 0.00 0.00 1.47
79 80 6.519213 GCCCACCTCCTAATTCTCTTGTATAG 60.519 46.154 0.00 0.00 0.00 1.31
80 81 6.555360 CCCACCTCCTAATTCTCTTGTATAGT 59.445 42.308 0.00 0.00 0.00 2.12
81 82 7.071321 CCCACCTCCTAATTCTCTTGTATAGTT 59.929 40.741 0.00 0.00 0.00 2.24
82 83 7.928706 CCACCTCCTAATTCTCTTGTATAGTTG 59.071 40.741 0.00 0.00 0.00 3.16
83 84 8.696374 CACCTCCTAATTCTCTTGTATAGTTGA 58.304 37.037 0.00 0.00 0.00 3.18
84 85 8.919145 ACCTCCTAATTCTCTTGTATAGTTGAG 58.081 37.037 0.00 0.00 0.00 3.02
85 86 8.364142 CCTCCTAATTCTCTTGTATAGTTGAGG 58.636 40.741 0.00 0.00 0.00 3.86
86 87 8.840200 TCCTAATTCTCTTGTATAGTTGAGGT 57.160 34.615 0.00 0.00 0.00 3.85
87 88 9.268282 TCCTAATTCTCTTGTATAGTTGAGGTT 57.732 33.333 0.00 0.00 0.00 3.50
88 89 9.319143 CCTAATTCTCTTGTATAGTTGAGGTTG 57.681 37.037 0.00 0.00 0.00 3.77
89 90 9.877178 CTAATTCTCTTGTATAGTTGAGGTTGT 57.123 33.333 0.00 0.00 0.00 3.32
90 91 8.553459 AATTCTCTTGTATAGTTGAGGTTGTG 57.447 34.615 0.00 0.00 0.00 3.33
91 92 6.037786 TCTCTTGTATAGTTGAGGTTGTGG 57.962 41.667 0.00 0.00 0.00 4.17
92 93 4.575885 TCTTGTATAGTTGAGGTTGTGGC 58.424 43.478 0.00 0.00 0.00 5.01
93 94 4.041075 TCTTGTATAGTTGAGGTTGTGGCA 59.959 41.667 0.00 0.00 0.00 4.92
94 95 3.670625 TGTATAGTTGAGGTTGTGGCAC 58.329 45.455 11.55 11.55 0.00 5.01
95 96 3.326588 TGTATAGTTGAGGTTGTGGCACT 59.673 43.478 19.83 0.00 0.00 4.40
96 97 2.543777 TAGTTGAGGTTGTGGCACTC 57.456 50.000 19.83 11.58 0.00 3.51
97 98 0.546122 AGTTGAGGTTGTGGCACTCA 59.454 50.000 19.83 11.13 39.31 3.41
98 99 1.143684 AGTTGAGGTTGTGGCACTCAT 59.856 47.619 19.83 9.60 40.56 2.90
99 100 1.537202 GTTGAGGTTGTGGCACTCATC 59.463 52.381 19.83 17.71 40.56 2.92
100 101 1.059098 TGAGGTTGTGGCACTCATCT 58.941 50.000 19.83 10.94 36.41 2.90
101 102 1.421268 TGAGGTTGTGGCACTCATCTT 59.579 47.619 19.83 2.99 36.41 2.40
102 103 1.808945 GAGGTTGTGGCACTCATCTTG 59.191 52.381 19.83 0.00 0.00 3.02
103 104 1.143684 AGGTTGTGGCACTCATCTTGT 59.856 47.619 19.83 0.00 0.00 3.16
104 105 2.371841 AGGTTGTGGCACTCATCTTGTA 59.628 45.455 19.83 0.00 0.00 2.41
105 106 2.484264 GGTTGTGGCACTCATCTTGTAC 59.516 50.000 19.83 3.17 0.00 2.90
106 107 3.138304 GTTGTGGCACTCATCTTGTACA 58.862 45.455 19.83 0.00 0.00 2.90
107 108 3.701205 TGTGGCACTCATCTTGTACAT 57.299 42.857 19.83 0.00 0.00 2.29
108 109 3.599343 TGTGGCACTCATCTTGTACATC 58.401 45.455 19.83 0.00 0.00 3.06
109 110 3.007831 TGTGGCACTCATCTTGTACATCA 59.992 43.478 19.83 0.00 0.00 3.07
110 111 4.194640 GTGGCACTCATCTTGTACATCAT 58.805 43.478 11.13 0.00 0.00 2.45
111 112 5.104982 TGTGGCACTCATCTTGTACATCATA 60.105 40.000 19.83 0.00 0.00 2.15
112 113 5.994054 GTGGCACTCATCTTGTACATCATAT 59.006 40.000 11.13 0.00 0.00 1.78
113 114 7.154656 GTGGCACTCATCTTGTACATCATATA 58.845 38.462 11.13 0.00 0.00 0.86
114 115 7.821359 GTGGCACTCATCTTGTACATCATATAT 59.179 37.037 11.13 0.00 0.00 0.86
115 116 9.034800 TGGCACTCATCTTGTACATCATATATA 57.965 33.333 0.00 0.00 0.00 0.86
116 117 9.307121 GGCACTCATCTTGTACATCATATATAC 57.693 37.037 0.00 0.00 0.00 1.47
117 118 9.014533 GCACTCATCTTGTACATCATATATACG 57.985 37.037 0.00 0.00 0.00 3.06
122 123 9.290483 CATCTTGTACATCATATATACGTGTCC 57.710 37.037 0.00 0.00 0.00 4.02
123 124 8.398878 TCTTGTACATCATATATACGTGTCCA 57.601 34.615 0.00 0.00 0.00 4.02
124 125 8.512138 TCTTGTACATCATATATACGTGTCCAG 58.488 37.037 0.00 0.00 0.00 3.86
125 126 7.754851 TGTACATCATATATACGTGTCCAGT 57.245 36.000 0.00 0.00 0.00 4.00
126 127 7.590279 TGTACATCATATATACGTGTCCAGTG 58.410 38.462 0.00 0.00 0.00 3.66
127 128 5.470368 ACATCATATATACGTGTCCAGTGC 58.530 41.667 0.00 0.00 0.00 4.40
128 129 5.010617 ACATCATATATACGTGTCCAGTGCA 59.989 40.000 0.00 0.00 0.00 4.57
129 130 4.866921 TCATATATACGTGTCCAGTGCAC 58.133 43.478 9.40 9.40 0.00 4.57
130 131 2.596904 ATATACGTGTCCAGTGCACC 57.403 50.000 14.63 0.00 33.61 5.01
131 132 0.171679 TATACGTGTCCAGTGCACCG 59.828 55.000 14.63 11.34 33.61 4.94
132 133 1.529152 ATACGTGTCCAGTGCACCGA 61.529 55.000 14.63 6.68 33.61 4.69
133 134 1.529152 TACGTGTCCAGTGCACCGAT 61.529 55.000 14.63 0.00 33.61 4.18
134 135 2.382746 CGTGTCCAGTGCACCGATG 61.383 63.158 14.63 5.30 33.61 3.84
146 147 1.062258 CACCGATGCAATTGTGTTGC 58.938 50.000 7.40 5.85 45.11 4.17
152 153 2.164491 GCAATTGTGTTGCATGGCC 58.836 52.632 7.40 0.00 44.34 5.36
153 154 0.320946 GCAATTGTGTTGCATGGCCT 60.321 50.000 3.32 0.00 44.34 5.19
154 155 1.067000 GCAATTGTGTTGCATGGCCTA 60.067 47.619 3.32 0.00 44.34 3.93
155 156 2.612471 GCAATTGTGTTGCATGGCCTAA 60.612 45.455 3.32 0.00 44.34 2.69
156 157 3.661944 CAATTGTGTTGCATGGCCTAAA 58.338 40.909 3.32 0.00 0.00 1.85
157 158 2.810439 TTGTGTTGCATGGCCTAAAC 57.190 45.000 3.32 3.89 0.00 2.01
158 159 1.697284 TGTGTTGCATGGCCTAAACA 58.303 45.000 3.32 6.66 0.00 2.83
159 160 2.246469 TGTGTTGCATGGCCTAAACAT 58.754 42.857 3.32 0.00 35.20 2.71
160 161 2.632028 TGTGTTGCATGGCCTAAACATT 59.368 40.909 3.32 0.00 35.20 2.71
161 162 2.995258 GTGTTGCATGGCCTAAACATTG 59.005 45.455 3.32 0.00 35.20 2.82
162 163 2.632028 TGTTGCATGGCCTAAACATTGT 59.368 40.909 3.32 0.00 0.00 2.71
163 164 3.253230 GTTGCATGGCCTAAACATTGTC 58.747 45.455 3.32 0.00 0.00 3.18
164 165 2.806434 TGCATGGCCTAAACATTGTCT 58.194 42.857 3.32 0.00 0.00 3.41
165 166 3.164268 TGCATGGCCTAAACATTGTCTT 58.836 40.909 3.32 0.00 0.00 3.01
166 167 3.056678 TGCATGGCCTAAACATTGTCTTG 60.057 43.478 3.32 0.00 0.00 3.02
167 168 3.056607 GCATGGCCTAAACATTGTCTTGT 60.057 43.478 3.32 0.00 0.00 3.16
168 169 4.157656 GCATGGCCTAAACATTGTCTTGTA 59.842 41.667 3.32 0.00 0.00 2.41
169 170 5.640732 CATGGCCTAAACATTGTCTTGTAC 58.359 41.667 3.32 0.00 0.00 2.90
190 191 2.959030 CACTACTGTAGCTGCCATCCTA 59.041 50.000 14.55 0.00 0.00 2.94
237 238 4.574599 AACTGGCAGTGAGAAAATTCAC 57.425 40.909 22.83 0.00 46.14 3.18
261 262 2.092914 GTGTATCCCCTTGGTCTGGAAG 60.093 54.545 0.00 0.00 0.00 3.46
262 263 1.134068 GTATCCCCTTGGTCTGGAAGC 60.134 57.143 0.00 0.00 0.00 3.86
263 264 0.846427 ATCCCCTTGGTCTGGAAGCA 60.846 55.000 0.00 0.00 0.00 3.91
264 265 1.001641 CCCCTTGGTCTGGAAGCAG 60.002 63.158 0.00 0.00 36.57 4.24
265 266 1.001641 CCCTTGGTCTGGAAGCAGG 60.002 63.158 0.00 0.00 36.57 4.85
266 267 1.676967 CCTTGGTCTGGAAGCAGGC 60.677 63.158 0.00 0.00 36.57 4.85
267 268 1.073722 CTTGGTCTGGAAGCAGGCA 59.926 57.895 0.00 0.00 36.57 4.75
268 269 1.228245 TTGGTCTGGAAGCAGGCAC 60.228 57.895 0.00 0.00 36.57 5.01
269 270 1.708993 TTGGTCTGGAAGCAGGCACT 61.709 55.000 0.00 0.00 43.88 4.40
270 271 1.073897 GGTCTGGAAGCAGGCACTT 59.926 57.895 0.00 0.00 34.60 3.16
271 272 0.538287 GGTCTGGAAGCAGGCACTTT 60.538 55.000 0.00 0.00 34.60 2.66
272 273 0.877743 GTCTGGAAGCAGGCACTTTC 59.122 55.000 0.00 0.00 34.60 2.62
273 274 0.250901 TCTGGAAGCAGGCACTTTCC 60.251 55.000 4.36 4.36 34.60 3.13
274 275 0.251077 CTGGAAGCAGGCACTTTCCT 60.251 55.000 10.82 0.00 34.60 3.36
275 276 1.003580 CTGGAAGCAGGCACTTTCCTA 59.996 52.381 10.82 0.21 34.60 2.94
276 277 1.271379 TGGAAGCAGGCACTTTCCTAC 60.271 52.381 10.82 0.00 34.60 3.18
277 278 1.454201 GAAGCAGGCACTTTCCTACC 58.546 55.000 0.00 0.00 34.60 3.18
278 279 0.771127 AAGCAGGCACTTTCCTACCA 59.229 50.000 0.00 0.00 34.60 3.25
279 280 0.036875 AGCAGGCACTTTCCTACCAC 59.963 55.000 0.00 0.00 34.60 4.16
280 281 1.298859 GCAGGCACTTTCCTACCACG 61.299 60.000 0.00 0.00 34.60 4.94
384 405 1.606606 GCCAAACGCAGATTTTCTCG 58.393 50.000 0.00 0.00 37.47 4.04
388 409 2.163818 AACGCAGATTTTCTCGGTGA 57.836 45.000 0.00 0.00 34.21 4.02
430 451 1.002087 GGAAGACCACCGAGATGTTGT 59.998 52.381 0.00 0.00 35.97 3.32
500 521 5.452077 CCCCTTTCAGATACACTAGCAGTAC 60.452 48.000 0.00 0.00 0.00 2.73
501 522 5.452077 CCCTTTCAGATACACTAGCAGTACC 60.452 48.000 0.00 0.00 0.00 3.34
502 523 5.452077 CCTTTCAGATACACTAGCAGTACCC 60.452 48.000 0.00 0.00 0.00 3.69
503 524 3.563223 TCAGATACACTAGCAGTACCCC 58.437 50.000 0.00 0.00 0.00 4.95
504 525 3.204606 TCAGATACACTAGCAGTACCCCT 59.795 47.826 0.00 0.00 0.00 4.79
505 526 3.570550 CAGATACACTAGCAGTACCCCTC 59.429 52.174 0.00 0.00 0.00 4.30
506 527 3.204606 AGATACACTAGCAGTACCCCTCA 59.795 47.826 0.00 0.00 0.00 3.86
507 528 2.320681 ACACTAGCAGTACCCCTCAA 57.679 50.000 0.00 0.00 0.00 3.02
508 529 2.616524 ACACTAGCAGTACCCCTCAAA 58.383 47.619 0.00 0.00 0.00 2.69
509 530 2.976882 ACACTAGCAGTACCCCTCAAAA 59.023 45.455 0.00 0.00 0.00 2.44
510 531 3.393278 ACACTAGCAGTACCCCTCAAAAA 59.607 43.478 0.00 0.00 0.00 1.94
563 584 1.367195 GTGAACAAACGGTCACGCG 60.367 57.895 3.53 3.53 46.04 6.01
598 619 1.800315 CGTCCACGTCCATGTCGAC 60.800 63.158 9.11 9.11 34.11 4.20
765 794 4.221422 GCGGTGCTGCGGGAGATA 62.221 66.667 0.00 0.00 0.00 1.98
766 795 2.279517 CGGTGCTGCGGGAGATAC 60.280 66.667 0.00 0.00 0.00 2.24
767 796 2.109181 GGTGCTGCGGGAGATACC 59.891 66.667 0.00 4.18 38.08 2.73
783 812 4.636435 CCGGTGTGGTGTGACCCC 62.636 72.222 0.00 0.00 37.50 4.95
784 813 3.867783 CGGTGTGGTGTGACCCCA 61.868 66.667 0.00 0.00 37.50 4.96
785 814 2.598467 GGTGTGGTGTGACCCCAA 59.402 61.111 0.00 0.00 37.50 4.12
786 815 1.528309 GGTGTGGTGTGACCCCAAG 60.528 63.158 0.00 0.00 37.50 3.61
903 932 2.281070 CCACAGAAGCGCAGTGGT 60.281 61.111 24.23 10.24 46.05 4.16
973 1002 1.076332 GCCGCGCAACCCTATATAAG 58.924 55.000 8.75 0.00 0.00 1.73
1057 1089 0.175302 CTCAGCTGGTTGATCGCTCT 59.825 55.000 15.13 0.00 0.00 4.09
1076 1108 1.391485 CTGTCCGCTTCAACTTCATCG 59.609 52.381 0.00 0.00 0.00 3.84
1084 1116 0.737367 TCAACTTCATCGCAGCGAGG 60.737 55.000 23.21 23.21 39.91 4.63
1108 1140 1.448717 GCTCTCCTTGGCTTCGTCC 60.449 63.158 0.00 0.00 0.00 4.79
1141 1182 5.202640 TGTACGTATTCGATCGAGATTGTG 58.797 41.667 18.54 9.80 40.62 3.33
1387 1428 0.576328 GCGTCTCGTCCTACTACTCG 59.424 60.000 0.00 0.00 0.00 4.18
1390 1431 1.851666 GTCTCGTCCTACTACTCGTCG 59.148 57.143 0.00 0.00 0.00 5.12
1399 1440 0.037882 ACTACTCGTCGTCGTCCTCA 60.038 55.000 1.33 0.00 38.33 3.86
1416 1457 2.423660 CCTCATCCTCCTACTCCTCGTT 60.424 54.545 0.00 0.00 0.00 3.85
1549 1590 2.808202 GCCGTTCCAGAGCATGTATGAT 60.808 50.000 0.00 0.00 0.00 2.45
1788 1852 2.897326 TGTTGTTCGAGATCTTCTCCCA 59.103 45.455 0.00 0.00 40.34 4.37
1814 3966 1.466856 TGGCAGCATCACCTTTCATC 58.533 50.000 0.00 0.00 0.00 2.92
1878 4030 7.068962 TGCTTTGGATCATGATAAATGTCACAT 59.931 33.333 8.54 0.00 0.00 3.21
1986 4138 5.040635 GCAACTTTTCTTTCGGATGACAAA 58.959 37.500 0.00 0.00 0.00 2.83
2026 4178 8.851960 AGGTTTACTTTTTCTTTTCGAATGAC 57.148 30.769 0.00 0.00 0.00 3.06
2065 4217 1.949847 ATCAGGACCGGAGTGCTTCG 61.950 60.000 9.46 0.00 42.95 3.79
2117 4269 9.575783 TGAATTTGTTTTGTTACTAGGTTTCAC 57.424 29.630 0.00 0.00 0.00 3.18
2118 4270 9.797556 GAATTTGTTTTGTTACTAGGTTTCACT 57.202 29.630 0.00 0.00 0.00 3.41
2119 4271 9.797556 AATTTGTTTTGTTACTAGGTTTCACTC 57.202 29.630 0.00 0.00 0.00 3.51
2120 4272 7.925043 TTGTTTTGTTACTAGGTTTCACTCA 57.075 32.000 0.00 0.00 0.00 3.41
2121 4273 7.925043 TGTTTTGTTACTAGGTTTCACTCAA 57.075 32.000 0.00 0.00 0.00 3.02
2122 4274 8.338072 TGTTTTGTTACTAGGTTTCACTCAAA 57.662 30.769 0.00 0.00 0.00 2.69
2123 4275 8.794553 TGTTTTGTTACTAGGTTTCACTCAAAA 58.205 29.630 0.00 0.00 32.49 2.44
2124 4276 9.797556 GTTTTGTTACTAGGTTTCACTCAAAAT 57.202 29.630 0.00 0.00 35.69 1.82
2127 4279 9.616156 TTGTTACTAGGTTTCACTCAAAATACA 57.384 29.630 0.00 0.00 0.00 2.29
2128 4280 9.787435 TGTTACTAGGTTTCACTCAAAATACAT 57.213 29.630 0.00 0.00 0.00 2.29
2131 4283 8.336801 ACTAGGTTTCACTCAAAATACATTCC 57.663 34.615 0.00 0.00 0.00 3.01
2132 4284 8.164070 ACTAGGTTTCACTCAAAATACATTCCT 58.836 33.333 0.00 0.00 0.00 3.36
2133 4285 9.667107 CTAGGTTTCACTCAAAATACATTCCTA 57.333 33.333 0.00 0.00 0.00 2.94
2134 4286 8.567285 AGGTTTCACTCAAAATACATTCCTAG 57.433 34.615 0.00 0.00 0.00 3.02
2135 4287 8.164070 AGGTTTCACTCAAAATACATTCCTAGT 58.836 33.333 0.00 0.00 0.00 2.57
2136 4288 8.237267 GGTTTCACTCAAAATACATTCCTAGTG 58.763 37.037 0.00 0.00 35.54 2.74
2137 4289 7.921786 TTCACTCAAAATACATTCCTAGTGG 57.078 36.000 0.00 0.00 35.08 4.00
2138 4290 7.016153 TCACTCAAAATACATTCCTAGTGGT 57.984 36.000 0.00 0.00 35.08 4.16
2139 4291 7.458397 TCACTCAAAATACATTCCTAGTGGTT 58.542 34.615 0.00 0.00 35.08 3.67
2140 4292 7.942341 TCACTCAAAATACATTCCTAGTGGTTT 59.058 33.333 0.00 0.00 35.08 3.27
2141 4293 8.576442 CACTCAAAATACATTCCTAGTGGTTTT 58.424 33.333 0.00 0.00 31.64 2.43
2142 4294 9.143155 ACTCAAAATACATTCCTAGTGGTTTTT 57.857 29.630 0.00 0.00 34.23 1.94
2157 4309 2.465725 TTTTTAGGTGAGGCGGGGA 58.534 52.632 0.00 0.00 0.00 4.81
2158 4310 0.996583 TTTTTAGGTGAGGCGGGGAT 59.003 50.000 0.00 0.00 0.00 3.85
2159 4311 0.254747 TTTTAGGTGAGGCGGGGATG 59.745 55.000 0.00 0.00 0.00 3.51
2160 4312 0.912487 TTTAGGTGAGGCGGGGATGT 60.912 55.000 0.00 0.00 0.00 3.06
2161 4313 1.622607 TTAGGTGAGGCGGGGATGTG 61.623 60.000 0.00 0.00 0.00 3.21
2162 4314 4.489771 GGTGAGGCGGGGATGTGG 62.490 72.222 0.00 0.00 0.00 4.17
2163 4315 3.717294 GTGAGGCGGGGATGTGGT 61.717 66.667 0.00 0.00 0.00 4.16
2164 4316 2.933287 TGAGGCGGGGATGTGGTT 60.933 61.111 0.00 0.00 0.00 3.67
2165 4317 2.438434 GAGGCGGGGATGTGGTTG 60.438 66.667 0.00 0.00 0.00 3.77
2166 4318 3.995506 GAGGCGGGGATGTGGTTGG 62.996 68.421 0.00 0.00 0.00 3.77
2167 4319 4.360405 GGCGGGGATGTGGTTGGT 62.360 66.667 0.00 0.00 0.00 3.67
2168 4320 2.282887 GCGGGGATGTGGTTGGTT 60.283 61.111 0.00 0.00 0.00 3.67
2169 4321 1.906333 GCGGGGATGTGGTTGGTTT 60.906 57.895 0.00 0.00 0.00 3.27
2170 4322 1.873270 GCGGGGATGTGGTTGGTTTC 61.873 60.000 0.00 0.00 0.00 2.78
2171 4323 0.538516 CGGGGATGTGGTTGGTTTCA 60.539 55.000 0.00 0.00 0.00 2.69
2172 4324 1.710816 GGGGATGTGGTTGGTTTCAA 58.289 50.000 0.00 0.00 0.00 2.69
2173 4325 1.618343 GGGGATGTGGTTGGTTTCAAG 59.382 52.381 0.00 0.00 32.92 3.02
2174 4326 2.593026 GGGATGTGGTTGGTTTCAAGA 58.407 47.619 0.00 0.00 32.92 3.02
2175 4327 3.165071 GGGATGTGGTTGGTTTCAAGAT 58.835 45.455 0.00 0.00 32.92 2.40
2176 4328 4.340617 GGGATGTGGTTGGTTTCAAGATA 58.659 43.478 0.00 0.00 32.92 1.98
2177 4329 4.157840 GGGATGTGGTTGGTTTCAAGATAC 59.842 45.833 0.00 0.00 32.92 2.24
2178 4330 5.010282 GGATGTGGTTGGTTTCAAGATACT 58.990 41.667 0.00 0.00 32.92 2.12
2179 4331 6.177610 GGATGTGGTTGGTTTCAAGATACTA 58.822 40.000 0.00 0.00 32.92 1.82
2180 4332 6.657541 GGATGTGGTTGGTTTCAAGATACTAA 59.342 38.462 0.00 0.00 32.92 2.24
2181 4333 7.339466 GGATGTGGTTGGTTTCAAGATACTAAT 59.661 37.037 0.00 0.00 32.92 1.73
2182 4334 7.447374 TGTGGTTGGTTTCAAGATACTAATG 57.553 36.000 0.00 0.00 32.92 1.90
2183 4335 6.432783 TGTGGTTGGTTTCAAGATACTAATGG 59.567 38.462 0.00 0.00 32.92 3.16
2184 4336 5.949354 TGGTTGGTTTCAAGATACTAATGGG 59.051 40.000 0.00 0.00 32.92 4.00
2185 4337 5.949952 GGTTGGTTTCAAGATACTAATGGGT 59.050 40.000 0.00 0.00 32.92 4.51
2186 4338 6.436218 GGTTGGTTTCAAGATACTAATGGGTT 59.564 38.462 0.00 0.00 32.92 4.11
2187 4339 7.039293 GGTTGGTTTCAAGATACTAATGGGTTT 60.039 37.037 0.00 0.00 32.92 3.27
2188 4340 8.364894 GTTGGTTTCAAGATACTAATGGGTTTT 58.635 33.333 0.00 0.00 32.92 2.43
2189 4341 8.117813 TGGTTTCAAGATACTAATGGGTTTTC 57.882 34.615 0.00 0.00 0.00 2.29
2190 4342 7.947890 TGGTTTCAAGATACTAATGGGTTTTCT 59.052 33.333 0.00 0.00 0.00 2.52
2191 4343 8.244113 GGTTTCAAGATACTAATGGGTTTTCTG 58.756 37.037 0.00 0.00 0.00 3.02
2192 4344 8.793592 GTTTCAAGATACTAATGGGTTTTCTGT 58.206 33.333 0.00 0.00 0.00 3.41
2202 4354 8.957466 ACTAATGGGTTTTCTGTAAATTAGAGC 58.043 33.333 0.00 0.00 0.00 4.09
2203 4355 7.775053 AATGGGTTTTCTGTAAATTAGAGCA 57.225 32.000 0.00 0.00 0.00 4.26
2204 4356 6.817765 TGGGTTTTCTGTAAATTAGAGCAG 57.182 37.500 0.00 0.00 0.00 4.24
2205 4357 6.539173 TGGGTTTTCTGTAAATTAGAGCAGA 58.461 36.000 0.00 0.00 36.35 4.26
2206 4358 6.655003 TGGGTTTTCTGTAAATTAGAGCAGAG 59.345 38.462 0.00 0.00 38.89 3.35
2207 4359 6.879458 GGGTTTTCTGTAAATTAGAGCAGAGA 59.121 38.462 0.00 0.00 38.89 3.10
2208 4360 7.390718 GGGTTTTCTGTAAATTAGAGCAGAGAA 59.609 37.037 0.00 0.00 38.89 2.87
2209 4361 8.447053 GGTTTTCTGTAAATTAGAGCAGAGAAG 58.553 37.037 0.00 0.00 38.89 2.85
2210 4362 8.994170 GTTTTCTGTAAATTAGAGCAGAGAAGT 58.006 33.333 0.00 0.00 38.89 3.01
2211 4363 8.539770 TTTCTGTAAATTAGAGCAGAGAAGTG 57.460 34.615 0.00 0.00 38.89 3.16
2212 4364 6.634805 TCTGTAAATTAGAGCAGAGAAGTGG 58.365 40.000 0.00 0.00 33.62 4.00
2213 4365 5.734720 TGTAAATTAGAGCAGAGAAGTGGG 58.265 41.667 0.00 0.00 0.00 4.61
2214 4366 3.922171 AATTAGAGCAGAGAAGTGGGG 57.078 47.619 0.00 0.00 0.00 4.96
2215 4367 2.327325 TTAGAGCAGAGAAGTGGGGT 57.673 50.000 0.00 0.00 0.00 4.95
2216 4368 2.327325 TAGAGCAGAGAAGTGGGGTT 57.673 50.000 0.00 0.00 0.00 4.11
2217 4369 1.439543 AGAGCAGAGAAGTGGGGTTT 58.560 50.000 0.00 0.00 0.00 3.27
2218 4370 1.777272 AGAGCAGAGAAGTGGGGTTTT 59.223 47.619 0.00 0.00 0.00 2.43
2219 4371 1.882623 GAGCAGAGAAGTGGGGTTTTG 59.117 52.381 0.00 0.00 0.00 2.44
2220 4372 1.215423 AGCAGAGAAGTGGGGTTTTGT 59.785 47.619 0.00 0.00 0.00 2.83
2221 4373 2.031870 GCAGAGAAGTGGGGTTTTGTT 58.968 47.619 0.00 0.00 0.00 2.83
2222 4374 2.223805 GCAGAGAAGTGGGGTTTTGTTG 60.224 50.000 0.00 0.00 0.00 3.33
2223 4375 2.031870 AGAGAAGTGGGGTTTTGTTGC 58.968 47.619 0.00 0.00 0.00 4.17
2224 4376 1.754226 GAGAAGTGGGGTTTTGTTGCA 59.246 47.619 0.00 0.00 0.00 4.08
2225 4377 2.167487 GAGAAGTGGGGTTTTGTTGCAA 59.833 45.455 0.00 0.00 0.00 4.08
2226 4378 2.569404 AGAAGTGGGGTTTTGTTGCAAA 59.431 40.909 0.00 0.00 0.00 3.68
2227 4379 3.008485 AGAAGTGGGGTTTTGTTGCAAAA 59.992 39.130 0.00 0.00 0.00 2.44
2228 4380 3.425162 AGTGGGGTTTTGTTGCAAAAA 57.575 38.095 0.00 0.00 0.00 1.94
2229 4381 3.961849 AGTGGGGTTTTGTTGCAAAAAT 58.038 36.364 2.11 0.00 32.02 1.82
2230 4382 3.693578 AGTGGGGTTTTGTTGCAAAAATG 59.306 39.130 2.11 0.00 32.02 2.32
2231 4383 3.441922 GTGGGGTTTTGTTGCAAAAATGT 59.558 39.130 2.11 0.00 32.02 2.71
2232 4384 3.691609 TGGGGTTTTGTTGCAAAAATGTC 59.308 39.130 2.11 0.00 32.02 3.06
2233 4385 3.691609 GGGGTTTTGTTGCAAAAATGTCA 59.308 39.130 2.11 0.00 32.02 3.58
2234 4386 4.438065 GGGGTTTTGTTGCAAAAATGTCAC 60.438 41.667 2.11 0.00 32.02 3.67
2235 4387 4.154918 GGGTTTTGTTGCAAAAATGTCACA 59.845 37.500 2.11 0.00 32.02 3.58
2236 4388 5.323105 GGTTTTGTTGCAAAAATGTCACAG 58.677 37.500 2.11 0.00 32.02 3.66
2237 4389 4.596801 TTTGTTGCAAAAATGTCACAGC 57.403 36.364 2.11 0.00 0.00 4.40
2238 4390 3.523606 TGTTGCAAAAATGTCACAGCT 57.476 38.095 0.00 0.00 0.00 4.24
2239 4391 3.859443 TGTTGCAAAAATGTCACAGCTT 58.141 36.364 0.00 0.00 0.00 3.74
2240 4392 5.003692 TGTTGCAAAAATGTCACAGCTTA 57.996 34.783 0.00 0.00 0.00 3.09
2241 4393 4.803088 TGTTGCAAAAATGTCACAGCTTAC 59.197 37.500 0.00 0.00 0.00 2.34
2242 4394 3.976169 TGCAAAAATGTCACAGCTTACC 58.024 40.909 0.00 0.00 0.00 2.85
2243 4395 3.636300 TGCAAAAATGTCACAGCTTACCT 59.364 39.130 0.00 0.00 0.00 3.08
2244 4396 4.229876 GCAAAAATGTCACAGCTTACCTC 58.770 43.478 0.00 0.00 0.00 3.85
2245 4397 4.261572 GCAAAAATGTCACAGCTTACCTCA 60.262 41.667 0.00 0.00 0.00 3.86
2246 4398 5.215160 CAAAAATGTCACAGCTTACCTCAC 58.785 41.667 0.00 0.00 0.00 3.51
2247 4399 3.769739 AATGTCACAGCTTACCTCACA 57.230 42.857 0.00 0.00 0.00 3.58
2248 4400 2.820059 TGTCACAGCTTACCTCACAG 57.180 50.000 0.00 0.00 0.00 3.66
2249 4401 2.039418 TGTCACAGCTTACCTCACAGT 58.961 47.619 0.00 0.00 0.00 3.55
2250 4402 2.035961 TGTCACAGCTTACCTCACAGTC 59.964 50.000 0.00 0.00 0.00 3.51
2251 4403 1.269723 TCACAGCTTACCTCACAGTCG 59.730 52.381 0.00 0.00 0.00 4.18
2252 4404 1.000163 CACAGCTTACCTCACAGTCGT 60.000 52.381 0.00 0.00 0.00 4.34
2253 4405 1.687123 ACAGCTTACCTCACAGTCGTT 59.313 47.619 0.00 0.00 0.00 3.85
2254 4406 2.889045 ACAGCTTACCTCACAGTCGTTA 59.111 45.455 0.00 0.00 0.00 3.18
2255 4407 3.057456 ACAGCTTACCTCACAGTCGTTAG 60.057 47.826 0.00 0.00 0.00 2.34
2256 4408 3.190744 CAGCTTACCTCACAGTCGTTAGA 59.809 47.826 0.00 0.00 0.00 2.10
2257 4409 4.017808 AGCTTACCTCACAGTCGTTAGAT 58.982 43.478 0.00 0.00 0.00 1.98
2258 4410 4.106197 GCTTACCTCACAGTCGTTAGATG 58.894 47.826 0.00 0.00 0.00 2.90
2259 4411 2.656560 ACCTCACAGTCGTTAGATGC 57.343 50.000 0.00 0.00 0.00 3.91
2260 4412 1.893137 ACCTCACAGTCGTTAGATGCA 59.107 47.619 0.00 0.00 0.00 3.96
2261 4413 2.094494 ACCTCACAGTCGTTAGATGCAG 60.094 50.000 0.00 0.00 0.00 4.41
2262 4414 2.164422 CCTCACAGTCGTTAGATGCAGA 59.836 50.000 0.00 0.00 0.00 4.26
2263 4415 3.181482 CCTCACAGTCGTTAGATGCAGAT 60.181 47.826 0.00 0.00 0.00 2.90
2264 4416 4.033990 TCACAGTCGTTAGATGCAGATC 57.966 45.455 0.00 0.00 0.00 2.75
2265 4417 3.696548 TCACAGTCGTTAGATGCAGATCT 59.303 43.478 0.00 0.00 42.03 2.75
2266 4418 3.795639 CACAGTCGTTAGATGCAGATCTG 59.204 47.826 18.84 18.84 39.44 2.90
2267 4419 3.696548 ACAGTCGTTAGATGCAGATCTGA 59.303 43.478 27.04 11.74 39.44 3.27
2268 4420 4.340666 ACAGTCGTTAGATGCAGATCTGAT 59.659 41.667 27.04 15.87 39.44 2.90
2269 4421 4.680567 CAGTCGTTAGATGCAGATCTGATG 59.319 45.833 27.04 9.59 39.44 3.07
2270 4422 3.986572 GTCGTTAGATGCAGATCTGATGG 59.013 47.826 27.04 0.00 39.44 3.51
2271 4423 3.638627 TCGTTAGATGCAGATCTGATGGT 59.361 43.478 27.04 9.80 39.44 3.55
2272 4424 3.986572 CGTTAGATGCAGATCTGATGGTC 59.013 47.826 27.04 15.93 39.44 4.02
2273 4425 4.500375 CGTTAGATGCAGATCTGATGGTCA 60.500 45.833 27.04 14.16 39.44 4.02
2274 4426 3.755112 AGATGCAGATCTGATGGTCAG 57.245 47.619 27.04 0.55 45.59 3.51
2287 4439 3.374988 TGATGGTCAGAAACGATGAATGC 59.625 43.478 0.00 0.00 0.00 3.56
2288 4440 2.083774 TGGTCAGAAACGATGAATGCC 58.916 47.619 0.00 0.00 0.00 4.40
2289 4441 2.083774 GGTCAGAAACGATGAATGCCA 58.916 47.619 0.00 0.00 0.00 4.92
2290 4442 2.096496 GGTCAGAAACGATGAATGCCAG 59.904 50.000 0.00 0.00 0.00 4.85
2291 4443 3.002791 GTCAGAAACGATGAATGCCAGA 58.997 45.455 0.00 0.00 0.00 3.86
2292 4444 3.002791 TCAGAAACGATGAATGCCAGAC 58.997 45.455 0.00 0.00 0.00 3.51
2293 4445 2.743664 CAGAAACGATGAATGCCAGACA 59.256 45.455 0.00 0.00 0.00 3.41
2294 4446 2.744202 AGAAACGATGAATGCCAGACAC 59.256 45.455 0.00 0.00 0.00 3.67
2295 4447 2.183478 AACGATGAATGCCAGACACA 57.817 45.000 0.00 0.00 0.00 3.72
2296 4448 1.442769 ACGATGAATGCCAGACACAC 58.557 50.000 0.00 0.00 0.00 3.82
2297 4449 1.270785 ACGATGAATGCCAGACACACA 60.271 47.619 0.00 0.00 0.00 3.72
2298 4450 1.805943 CGATGAATGCCAGACACACAA 59.194 47.619 0.00 0.00 0.00 3.33
2299 4451 2.421073 CGATGAATGCCAGACACACAAT 59.579 45.455 0.00 0.00 0.00 2.71
2300 4452 3.486375 CGATGAATGCCAGACACACAATC 60.486 47.826 0.00 0.00 0.00 2.67
2301 4453 2.861274 TGAATGCCAGACACACAATCA 58.139 42.857 0.00 0.00 0.00 2.57
2302 4454 3.423749 TGAATGCCAGACACACAATCAT 58.576 40.909 0.00 0.00 0.00 2.45
2303 4455 3.441222 TGAATGCCAGACACACAATCATC 59.559 43.478 0.00 0.00 0.00 2.92
2304 4456 2.565046 TGCCAGACACACAATCATCA 57.435 45.000 0.00 0.00 0.00 3.07
2305 4457 2.153645 TGCCAGACACACAATCATCAC 58.846 47.619 0.00 0.00 0.00 3.06
2306 4458 1.470098 GCCAGACACACAATCATCACC 59.530 52.381 0.00 0.00 0.00 4.02
2307 4459 2.781923 CCAGACACACAATCATCACCA 58.218 47.619 0.00 0.00 0.00 4.17
2308 4460 3.148412 CCAGACACACAATCATCACCAA 58.852 45.455 0.00 0.00 0.00 3.67
2309 4461 3.058016 CCAGACACACAATCATCACCAAC 60.058 47.826 0.00 0.00 0.00 3.77
2310 4462 3.817084 CAGACACACAATCATCACCAACT 59.183 43.478 0.00 0.00 0.00 3.16
2311 4463 4.996758 CAGACACACAATCATCACCAACTA 59.003 41.667 0.00 0.00 0.00 2.24
2312 4464 5.469760 CAGACACACAATCATCACCAACTAA 59.530 40.000 0.00 0.00 0.00 2.24
2313 4465 5.702670 AGACACACAATCATCACCAACTAAG 59.297 40.000 0.00 0.00 0.00 2.18
2314 4466 5.376625 ACACACAATCATCACCAACTAAGT 58.623 37.500 0.00 0.00 0.00 2.24
2315 4467 5.470098 ACACACAATCATCACCAACTAAGTC 59.530 40.000 0.00 0.00 0.00 3.01
2316 4468 5.702670 CACACAATCATCACCAACTAAGTCT 59.297 40.000 0.00 0.00 0.00 3.24
2317 4469 6.205464 CACACAATCATCACCAACTAAGTCTT 59.795 38.462 0.00 0.00 0.00 3.01
2318 4470 6.772716 ACACAATCATCACCAACTAAGTCTTT 59.227 34.615 0.00 0.00 0.00 2.52
2319 4471 7.285401 ACACAATCATCACCAACTAAGTCTTTT 59.715 33.333 0.00 0.00 0.00 2.27
2320 4472 8.783093 CACAATCATCACCAACTAAGTCTTTTA 58.217 33.333 0.00 0.00 0.00 1.52
2321 4473 9.520515 ACAATCATCACCAACTAAGTCTTTTAT 57.479 29.630 0.00 0.00 0.00 1.40
2339 4491 9.815936 GTCTTTTATAGAAGTAGAGATACGAGC 57.184 37.037 3.17 0.00 33.81 5.03
2340 4492 9.001542 TCTTTTATAGAAGTAGAGATACGAGCC 57.998 37.037 3.17 0.00 0.00 4.70
2341 4493 7.684937 TTTATAGAAGTAGAGATACGAGCCC 57.315 40.000 0.00 0.00 0.00 5.19
2374 4526 1.546773 CCCAGGACAAAAATGACCCGA 60.547 52.381 0.00 0.00 0.00 5.14
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.179215 CGAAGCATCGCCAAAGACAC 60.179 55.000 0.00 0.00 42.96 3.67
1 2 2.161831 CGAAGCATCGCCAAAGACA 58.838 52.632 0.00 0.00 42.96 3.41
11 12 3.918220 CCGCGCAGTCGAAGCATC 61.918 66.667 8.75 2.15 38.10 3.91
24 25 1.469335 ATATACACCTCCACCCCGCG 61.469 60.000 0.00 0.00 0.00 6.46
25 26 0.763035 AATATACACCTCCACCCCGC 59.237 55.000 0.00 0.00 0.00 6.13
26 27 1.766496 ACAATATACACCTCCACCCCG 59.234 52.381 0.00 0.00 0.00 5.73
27 28 2.508300 ACACAATATACACCTCCACCCC 59.492 50.000 0.00 0.00 0.00 4.95
28 29 3.454812 AGACACAATATACACCTCCACCC 59.545 47.826 0.00 0.00 0.00 4.61
29 30 4.755266 AGACACAATATACACCTCCACC 57.245 45.455 0.00 0.00 0.00 4.61
30 31 4.876107 CCAAGACACAATATACACCTCCAC 59.124 45.833 0.00 0.00 0.00 4.02
31 32 4.080582 CCCAAGACACAATATACACCTCCA 60.081 45.833 0.00 0.00 0.00 3.86
32 33 4.451900 CCCAAGACACAATATACACCTCC 58.548 47.826 0.00 0.00 0.00 4.30
33 34 3.877508 GCCCAAGACACAATATACACCTC 59.122 47.826 0.00 0.00 0.00 3.85
34 35 3.371595 GGCCCAAGACACAATATACACCT 60.372 47.826 0.00 0.00 0.00 4.00
35 36 2.949644 GGCCCAAGACACAATATACACC 59.050 50.000 0.00 0.00 0.00 4.16
36 37 2.949644 GGGCCCAAGACACAATATACAC 59.050 50.000 19.95 0.00 0.00 2.90
37 38 2.578480 TGGGCCCAAGACACAATATACA 59.422 45.455 26.33 0.00 0.00 2.29
38 39 2.949644 GTGGGCCCAAGACACAATATAC 59.050 50.000 30.64 5.00 35.30 1.47
39 40 2.092103 GGTGGGCCCAAGACACAATATA 60.092 50.000 30.64 0.00 36.87 0.86
40 41 1.341976 GGTGGGCCCAAGACACAATAT 60.342 52.381 30.64 0.00 36.87 1.28
41 42 0.039035 GGTGGGCCCAAGACACAATA 59.961 55.000 30.64 0.00 36.87 1.90
42 43 1.228862 GGTGGGCCCAAGACACAAT 60.229 57.895 30.64 0.00 36.87 2.71
43 44 2.197324 GGTGGGCCCAAGACACAA 59.803 61.111 30.64 0.00 36.87 3.33
44 45 2.776526 AGGTGGGCCCAAGACACA 60.777 61.111 30.64 0.00 36.87 3.72
45 46 2.034221 GAGGTGGGCCCAAGACAC 59.966 66.667 30.64 14.31 34.66 3.67
46 47 2.409984 TAGGAGGTGGGCCCAAGACA 62.410 60.000 30.64 7.04 34.66 3.41
47 48 1.205460 TTAGGAGGTGGGCCCAAGAC 61.205 60.000 30.64 20.31 34.66 3.01
48 49 0.253630 ATTAGGAGGTGGGCCCAAGA 60.254 55.000 30.64 0.00 34.66 3.02
49 50 0.631212 AATTAGGAGGTGGGCCCAAG 59.369 55.000 30.64 0.00 34.66 3.61
50 51 0.629058 GAATTAGGAGGTGGGCCCAA 59.371 55.000 30.64 9.89 34.66 4.12
51 52 0.253630 AGAATTAGGAGGTGGGCCCA 60.254 55.000 24.45 24.45 34.66 5.36
52 53 0.474614 GAGAATTAGGAGGTGGGCCC 59.525 60.000 17.59 17.59 34.57 5.80
53 54 1.512735 AGAGAATTAGGAGGTGGGCC 58.487 55.000 0.00 0.00 0.00 5.80
54 55 2.239907 ACAAGAGAATTAGGAGGTGGGC 59.760 50.000 0.00 0.00 0.00 5.36
55 56 5.896073 ATACAAGAGAATTAGGAGGTGGG 57.104 43.478 0.00 0.00 0.00 4.61
56 57 7.604657 ACTATACAAGAGAATTAGGAGGTGG 57.395 40.000 0.00 0.00 0.00 4.61
57 58 8.696374 TCAACTATACAAGAGAATTAGGAGGTG 58.304 37.037 0.00 0.00 0.00 4.00
58 59 8.840200 TCAACTATACAAGAGAATTAGGAGGT 57.160 34.615 0.00 0.00 0.00 3.85
59 60 8.364142 CCTCAACTATACAAGAGAATTAGGAGG 58.636 40.741 0.00 0.00 0.00 4.30
60 61 8.919145 ACCTCAACTATACAAGAGAATTAGGAG 58.081 37.037 0.00 0.00 0.00 3.69
61 62 8.840200 ACCTCAACTATACAAGAGAATTAGGA 57.160 34.615 0.00 0.00 0.00 2.94
62 63 9.319143 CAACCTCAACTATACAAGAGAATTAGG 57.681 37.037 0.00 0.00 0.00 2.69
63 64 9.877178 ACAACCTCAACTATACAAGAGAATTAG 57.123 33.333 0.00 0.00 0.00 1.73
64 65 9.653287 CACAACCTCAACTATACAAGAGAATTA 57.347 33.333 0.00 0.00 0.00 1.40
65 66 7.607991 CCACAACCTCAACTATACAAGAGAATT 59.392 37.037 0.00 0.00 0.00 2.17
66 67 7.106239 CCACAACCTCAACTATACAAGAGAAT 58.894 38.462 0.00 0.00 0.00 2.40
67 68 6.464222 CCACAACCTCAACTATACAAGAGAA 58.536 40.000 0.00 0.00 0.00 2.87
68 69 5.568825 GCCACAACCTCAACTATACAAGAGA 60.569 44.000 0.00 0.00 0.00 3.10
69 70 4.631813 GCCACAACCTCAACTATACAAGAG 59.368 45.833 0.00 0.00 0.00 2.85
70 71 4.041075 TGCCACAACCTCAACTATACAAGA 59.959 41.667 0.00 0.00 0.00 3.02
71 72 4.154195 GTGCCACAACCTCAACTATACAAG 59.846 45.833 0.00 0.00 0.00 3.16
72 73 4.069304 GTGCCACAACCTCAACTATACAA 58.931 43.478 0.00 0.00 0.00 2.41
73 74 3.326588 AGTGCCACAACCTCAACTATACA 59.673 43.478 0.00 0.00 0.00 2.29
74 75 3.933332 GAGTGCCACAACCTCAACTATAC 59.067 47.826 0.00 0.00 0.00 1.47
75 76 3.580895 TGAGTGCCACAACCTCAACTATA 59.419 43.478 0.00 0.00 32.55 1.31
76 77 2.371841 TGAGTGCCACAACCTCAACTAT 59.628 45.455 0.00 0.00 32.55 2.12
77 78 1.765904 TGAGTGCCACAACCTCAACTA 59.234 47.619 0.00 0.00 32.55 2.24
78 79 0.546122 TGAGTGCCACAACCTCAACT 59.454 50.000 0.00 0.00 32.55 3.16
79 80 1.537202 GATGAGTGCCACAACCTCAAC 59.463 52.381 0.00 0.00 38.61 3.18
80 81 1.421268 AGATGAGTGCCACAACCTCAA 59.579 47.619 0.00 0.00 38.61 3.02
81 82 1.059098 AGATGAGTGCCACAACCTCA 58.941 50.000 0.00 0.00 39.38 3.86
82 83 1.808945 CAAGATGAGTGCCACAACCTC 59.191 52.381 0.00 0.00 0.00 3.85
83 84 1.143684 ACAAGATGAGTGCCACAACCT 59.856 47.619 0.00 0.00 0.00 3.50
84 85 1.609208 ACAAGATGAGTGCCACAACC 58.391 50.000 0.00 0.00 0.00 3.77
85 86 3.138304 TGTACAAGATGAGTGCCACAAC 58.862 45.455 0.00 0.00 0.00 3.32
86 87 3.483808 TGTACAAGATGAGTGCCACAA 57.516 42.857 0.00 0.00 0.00 3.33
87 88 3.007831 TGATGTACAAGATGAGTGCCACA 59.992 43.478 0.00 0.00 0.00 4.17
88 89 3.599343 TGATGTACAAGATGAGTGCCAC 58.401 45.455 0.00 0.00 0.00 5.01
89 90 3.979101 TGATGTACAAGATGAGTGCCA 57.021 42.857 0.00 0.00 0.00 4.92
90 91 9.307121 GTATATATGATGTACAAGATGAGTGCC 57.693 37.037 0.00 0.00 0.00 5.01
91 92 9.014533 CGTATATATGATGTACAAGATGAGTGC 57.985 37.037 0.00 0.00 0.00 4.40
96 97 9.290483 GGACACGTATATATGATGTACAAGATG 57.710 37.037 8.98 0.00 0.00 2.90
97 98 9.020731 TGGACACGTATATATGATGTACAAGAT 57.979 33.333 14.90 0.00 31.16 2.40
98 99 8.398878 TGGACACGTATATATGATGTACAAGA 57.601 34.615 14.90 0.00 31.16 3.02
99 100 8.297426 ACTGGACACGTATATATGATGTACAAG 58.703 37.037 16.63 14.03 33.79 3.16
100 101 8.079809 CACTGGACACGTATATATGATGTACAA 58.920 37.037 16.63 0.00 33.79 2.41
101 102 7.590279 CACTGGACACGTATATATGATGTACA 58.410 38.462 8.98 13.29 33.15 2.90
102 103 6.527023 GCACTGGACACGTATATATGATGTAC 59.473 42.308 8.98 9.97 0.00 2.90
103 104 6.207810 TGCACTGGACACGTATATATGATGTA 59.792 38.462 8.98 0.00 0.00 2.29
104 105 5.010617 TGCACTGGACACGTATATATGATGT 59.989 40.000 8.98 8.90 0.00 3.06
105 106 5.346011 GTGCACTGGACACGTATATATGATG 59.654 44.000 10.32 6.09 0.00 3.07
106 107 5.470368 GTGCACTGGACACGTATATATGAT 58.530 41.667 10.32 0.00 0.00 2.45
107 108 4.261867 GGTGCACTGGACACGTATATATGA 60.262 45.833 17.98 0.00 38.98 2.15
108 109 3.987868 GGTGCACTGGACACGTATATATG 59.012 47.826 17.98 0.12 38.98 1.78
109 110 3.305131 CGGTGCACTGGACACGTATATAT 60.305 47.826 18.43 0.00 38.98 0.86
110 111 2.033675 CGGTGCACTGGACACGTATATA 59.966 50.000 18.43 0.00 38.98 0.86
111 112 1.202371 CGGTGCACTGGACACGTATAT 60.202 52.381 18.43 0.00 38.98 0.86
112 113 0.171679 CGGTGCACTGGACACGTATA 59.828 55.000 18.43 0.00 38.98 1.47
113 114 1.080093 CGGTGCACTGGACACGTAT 60.080 57.895 18.43 0.00 38.98 3.06
114 115 1.529152 ATCGGTGCACTGGACACGTA 61.529 55.000 25.15 4.57 38.98 3.57
115 116 2.867855 ATCGGTGCACTGGACACGT 61.868 57.895 25.15 1.56 38.98 4.49
116 117 2.048222 ATCGGTGCACTGGACACG 60.048 61.111 25.15 14.63 38.98 4.49
117 118 3.566261 CATCGGTGCACTGGACAC 58.434 61.111 25.15 1.95 37.31 3.67
127 128 1.062258 GCAACACAATTGCATCGGTG 58.938 50.000 5.05 9.72 44.34 4.94
128 129 3.495124 GCAACACAATTGCATCGGT 57.505 47.368 5.05 0.00 44.34 4.69
134 135 0.320946 AGGCCATGCAACACAATTGC 60.321 50.000 5.01 4.68 45.11 3.56
135 136 3.316071 TTAGGCCATGCAACACAATTG 57.684 42.857 5.01 3.24 0.00 2.32
136 137 3.070734 TGTTTAGGCCATGCAACACAATT 59.929 39.130 5.01 0.00 0.00 2.32
137 138 2.632028 TGTTTAGGCCATGCAACACAAT 59.368 40.909 5.01 0.00 0.00 2.71
138 139 2.034878 TGTTTAGGCCATGCAACACAA 58.965 42.857 5.01 0.00 0.00 3.33
139 140 1.697284 TGTTTAGGCCATGCAACACA 58.303 45.000 5.01 0.00 0.00 3.72
140 141 2.995258 CAATGTTTAGGCCATGCAACAC 59.005 45.455 5.01 0.00 32.10 3.32
141 142 2.632028 ACAATGTTTAGGCCATGCAACA 59.368 40.909 5.01 8.54 33.78 3.33
142 143 3.056607 AGACAATGTTTAGGCCATGCAAC 60.057 43.478 5.01 2.22 0.00 4.17
143 144 3.164268 AGACAATGTTTAGGCCATGCAA 58.836 40.909 5.01 0.00 0.00 4.08
144 145 2.806434 AGACAATGTTTAGGCCATGCA 58.194 42.857 5.01 0.00 0.00 3.96
145 146 3.056607 ACAAGACAATGTTTAGGCCATGC 60.057 43.478 5.01 0.00 0.00 4.06
146 147 4.789012 ACAAGACAATGTTTAGGCCATG 57.211 40.909 5.01 0.00 0.00 3.66
147 148 5.183140 GTGTACAAGACAATGTTTAGGCCAT 59.817 40.000 5.01 0.00 40.66 4.40
148 149 4.517453 GTGTACAAGACAATGTTTAGGCCA 59.483 41.667 5.01 0.00 40.66 5.36
149 150 4.760204 AGTGTACAAGACAATGTTTAGGCC 59.240 41.667 0.00 0.00 40.66 5.19
150 151 5.941948 AGTGTACAAGACAATGTTTAGGC 57.058 39.130 0.00 0.00 40.66 3.93
151 152 7.656137 ACAGTAGTGTACAAGACAATGTTTAGG 59.344 37.037 0.00 0.00 40.66 2.69
152 153 8.589335 ACAGTAGTGTACAAGACAATGTTTAG 57.411 34.615 0.00 0.00 40.66 1.85
153 154 9.687210 CTACAGTAGTGTACAAGACAATGTTTA 57.313 33.333 6.31 0.00 40.66 2.01
154 155 7.170998 GCTACAGTAGTGTACAAGACAATGTTT 59.829 37.037 6.31 0.00 40.66 2.83
155 156 6.645415 GCTACAGTAGTGTACAAGACAATGTT 59.355 38.462 6.31 0.00 40.66 2.71
156 157 6.015350 AGCTACAGTAGTGTACAAGACAATGT 60.015 38.462 6.31 3.19 40.66 2.71
157 158 6.309009 CAGCTACAGTAGTGTACAAGACAATG 59.691 42.308 6.31 0.00 40.66 2.82
158 159 6.390721 CAGCTACAGTAGTGTACAAGACAAT 58.609 40.000 6.31 0.00 40.66 2.71
159 160 5.769367 CAGCTACAGTAGTGTACAAGACAA 58.231 41.667 6.31 0.00 40.66 3.18
160 161 4.321008 GCAGCTACAGTAGTGTACAAGACA 60.321 45.833 6.31 0.00 38.19 3.41
161 162 4.167268 GCAGCTACAGTAGTGTACAAGAC 58.833 47.826 6.31 0.00 38.19 3.01
162 163 3.192844 GGCAGCTACAGTAGTGTACAAGA 59.807 47.826 6.31 0.00 38.19 3.02
163 164 3.056821 TGGCAGCTACAGTAGTGTACAAG 60.057 47.826 6.31 0.65 38.19 3.16
164 165 2.894765 TGGCAGCTACAGTAGTGTACAA 59.105 45.455 6.31 0.00 38.19 2.41
165 166 2.521126 TGGCAGCTACAGTAGTGTACA 58.479 47.619 6.31 0.00 38.19 2.90
166 167 3.491104 GGATGGCAGCTACAGTAGTGTAC 60.491 52.174 6.31 4.62 38.19 2.90
167 168 2.693591 GGATGGCAGCTACAGTAGTGTA 59.306 50.000 10.01 10.01 38.19 2.90
168 169 1.482593 GGATGGCAGCTACAGTAGTGT 59.517 52.381 8.55 8.55 41.06 3.55
169 170 1.759445 AGGATGGCAGCTACAGTAGTG 59.241 52.381 9.42 7.45 0.00 2.74
190 191 3.961480 TGATCGATCTGAGGTTGTGTT 57.039 42.857 25.02 0.00 0.00 3.32
261 262 1.298859 CGTGGTAGGAAAGTGCCTGC 61.299 60.000 0.00 0.00 39.08 4.85
262 263 0.673644 CCGTGGTAGGAAAGTGCCTG 60.674 60.000 0.00 0.00 39.08 4.85
263 264 1.677552 CCGTGGTAGGAAAGTGCCT 59.322 57.895 0.00 0.00 42.15 4.75
264 265 1.376812 CCCGTGGTAGGAAAGTGCC 60.377 63.158 0.00 0.00 0.00 5.01
265 266 0.035739 TTCCCGTGGTAGGAAAGTGC 59.964 55.000 0.00 0.00 40.46 4.40
266 267 2.554370 TTTCCCGTGGTAGGAAAGTG 57.446 50.000 0.89 0.00 46.10 3.16
270 271 3.181442 TGTGAATTTTCCCGTGGTAGGAA 60.181 43.478 0.00 0.00 41.69 3.36
271 272 2.372504 TGTGAATTTTCCCGTGGTAGGA 59.627 45.455 0.00 0.00 0.00 2.94
272 273 2.486592 GTGTGAATTTTCCCGTGGTAGG 59.513 50.000 0.00 0.00 0.00 3.18
273 274 2.486592 GGTGTGAATTTTCCCGTGGTAG 59.513 50.000 0.00 0.00 0.00 3.18
274 275 2.158652 TGGTGTGAATTTTCCCGTGGTA 60.159 45.455 0.00 0.00 0.00 3.25
275 276 1.324383 GGTGTGAATTTTCCCGTGGT 58.676 50.000 0.00 0.00 0.00 4.16
276 277 1.000717 GTGGTGTGAATTTTCCCGTGG 60.001 52.381 0.00 0.00 0.00 4.94
277 278 1.334599 CGTGGTGTGAATTTTCCCGTG 60.335 52.381 0.00 0.00 0.00 4.94
278 279 0.948678 CGTGGTGTGAATTTTCCCGT 59.051 50.000 0.00 0.00 0.00 5.28
279 280 0.239879 CCGTGGTGTGAATTTTCCCG 59.760 55.000 0.00 0.00 0.00 5.14
280 281 1.611519 TCCGTGGTGTGAATTTTCCC 58.388 50.000 0.00 0.00 0.00 3.97
384 405 1.735559 GTCCACGTACGGCTTCACC 60.736 63.158 21.06 0.00 0.00 4.02
388 409 1.466025 TTCCAGTCCACGTACGGCTT 61.466 55.000 21.06 0.00 0.00 4.35
430 451 2.105134 TCGCCTTTCAGTTCAAACCCTA 59.895 45.455 0.00 0.00 0.00 3.53
509 530 8.674607 GGCTTGTACTGCTAGTGTAATTATTTT 58.325 33.333 10.33 0.00 0.00 1.82
510 531 8.047310 AGGCTTGTACTGCTAGTGTAATTATTT 58.953 33.333 10.33 0.00 0.00 1.40
511 532 7.565680 AGGCTTGTACTGCTAGTGTAATTATT 58.434 34.615 10.33 0.00 0.00 1.40
512 533 7.125792 AGGCTTGTACTGCTAGTGTAATTAT 57.874 36.000 10.33 0.00 0.00 1.28
513 534 6.540438 AGGCTTGTACTGCTAGTGTAATTA 57.460 37.500 10.33 0.00 0.00 1.40
514 535 5.422214 AGGCTTGTACTGCTAGTGTAATT 57.578 39.130 10.33 0.00 0.00 1.40
515 536 5.069251 CCTAGGCTTGTACTGCTAGTGTAAT 59.931 44.000 0.00 0.00 0.00 1.89
516 537 4.401519 CCTAGGCTTGTACTGCTAGTGTAA 59.598 45.833 0.00 0.00 0.00 2.41
517 538 3.952323 CCTAGGCTTGTACTGCTAGTGTA 59.048 47.826 0.00 0.00 0.00 2.90
518 539 2.761208 CCTAGGCTTGTACTGCTAGTGT 59.239 50.000 0.00 0.00 0.00 3.55
519 540 2.482142 GCCTAGGCTTGTACTGCTAGTG 60.482 54.545 27.17 0.00 38.26 2.74
520 541 1.757699 GCCTAGGCTTGTACTGCTAGT 59.242 52.381 27.17 0.00 38.26 2.57
521 542 1.757118 TGCCTAGGCTTGTACTGCTAG 59.243 52.381 33.07 9.53 42.51 3.42
522 543 1.480954 GTGCCTAGGCTTGTACTGCTA 59.519 52.381 33.07 7.18 42.51 3.49
523 544 0.250513 GTGCCTAGGCTTGTACTGCT 59.749 55.000 33.07 1.82 42.51 4.24
524 545 0.036388 TGTGCCTAGGCTTGTACTGC 60.036 55.000 33.07 13.48 42.51 4.40
525 546 2.289694 ACTTGTGCCTAGGCTTGTACTG 60.290 50.000 33.07 20.03 42.51 2.74
526 547 1.978580 ACTTGTGCCTAGGCTTGTACT 59.021 47.619 33.07 9.70 42.51 2.73
527 548 2.076863 CACTTGTGCCTAGGCTTGTAC 58.923 52.381 33.07 22.94 42.51 2.90
563 584 2.032290 GGACGTCTGGTTACTTTTGTGC 60.032 50.000 16.46 0.00 0.00 4.57
598 619 2.289002 GCGCTGGAGTTATTGATCTTGG 59.711 50.000 0.00 0.00 0.00 3.61
750 779 2.109181 GGTATCTCCCGCAGCACC 59.891 66.667 0.00 0.00 0.00 5.01
766 795 4.636435 GGGGTCACACCACACCGG 62.636 72.222 0.00 0.00 42.67 5.28
767 796 3.867783 TGGGGTCACACCACACCG 61.868 66.667 0.00 0.00 46.58 4.94
771 800 1.600916 GAGCTTGGGGTCACACCAC 60.601 63.158 0.00 0.00 43.70 4.16
772 801 2.075566 TGAGCTTGGGGTCACACCA 61.076 57.895 0.00 0.00 43.82 4.17
773 802 2.836154 TGAGCTTGGGGTCACACC 59.164 61.111 0.00 0.00 43.82 4.16
777 806 2.517959 CTTTGATTGAGCTTGGGGTCA 58.482 47.619 0.00 0.00 46.48 4.02
778 807 1.203287 GCTTTGATTGAGCTTGGGGTC 59.797 52.381 0.00 0.00 40.08 4.46
779 808 1.260544 GCTTTGATTGAGCTTGGGGT 58.739 50.000 0.00 0.00 37.18 4.95
780 809 0.533951 GGCTTTGATTGAGCTTGGGG 59.466 55.000 0.00 0.00 40.01 4.96
781 810 0.533951 GGGCTTTGATTGAGCTTGGG 59.466 55.000 0.00 0.00 40.01 4.12
782 811 0.533951 GGGGCTTTGATTGAGCTTGG 59.466 55.000 0.00 0.00 40.01 3.61
783 812 1.259609 TGGGGCTTTGATTGAGCTTG 58.740 50.000 0.00 0.00 40.01 4.01
784 813 1.829222 CATGGGGCTTTGATTGAGCTT 59.171 47.619 0.00 0.00 40.01 3.74
785 814 1.272872 ACATGGGGCTTTGATTGAGCT 60.273 47.619 0.00 0.00 40.01 4.09
786 815 1.134907 CACATGGGGCTTTGATTGAGC 60.135 52.381 0.00 0.00 39.41 4.26
903 932 7.492669 GGAGACGATCTTTGTTTCAAGATATCA 59.507 37.037 5.32 0.00 36.01 2.15
995 1027 2.928334 CTTTGGGATGAGGAGGTGATG 58.072 52.381 0.00 0.00 0.00 3.07
1057 1089 1.428448 CGATGAAGTTGAAGCGGACA 58.572 50.000 0.00 0.00 0.00 4.02
1108 1140 2.033747 CGAATACGTACAGCAGCAATGG 60.034 50.000 0.00 0.00 34.56 3.16
1141 1182 1.452833 GCTCAGCTTGTCCATCCCC 60.453 63.158 0.00 0.00 0.00 4.81
1373 1414 1.795525 CGACGACGAGTAGTAGGACGA 60.796 57.143 0.00 0.00 42.66 4.20
1387 1428 0.748729 AGGAGGATGAGGACGACGAC 60.749 60.000 0.00 0.00 0.00 4.34
1390 1431 2.223745 GAGTAGGAGGATGAGGACGAC 58.776 57.143 0.00 0.00 0.00 4.34
1399 1440 1.477195 CCGAACGAGGAGTAGGAGGAT 60.477 57.143 0.00 0.00 34.07 3.24
1757 1820 2.357637 TCTCGAACAACAAGGGCAAAAG 59.642 45.455 0.00 0.00 0.00 2.27
1788 1852 1.746615 GTGATGCTGCCATGACGGT 60.747 57.895 0.00 0.00 36.97 4.83
1814 3966 7.889589 TGATTCCAAACATATACGAGCATAG 57.110 36.000 0.00 0.00 0.00 2.23
1928 4080 3.685139 AAGTTGTCATCCTCGTGTCAT 57.315 42.857 0.00 0.00 0.00 3.06
2037 4189 3.775316 ACTCCGGTCCTGATGTTTTCTAT 59.225 43.478 0.00 0.00 0.00 1.98
2074 4226 8.801715 ACAAATTCAAATGATAAGTGTCACAC 57.198 30.769 0.00 0.00 34.10 3.82
2111 4263 8.237267 CCACTAGGAATGTATTTTGAGTGAAAC 58.763 37.037 0.00 0.00 36.07 2.78
2112 4264 7.942341 ACCACTAGGAATGTATTTTGAGTGAAA 59.058 33.333 0.00 0.00 36.07 2.69
2113 4265 7.458397 ACCACTAGGAATGTATTTTGAGTGAA 58.542 34.615 0.00 0.00 36.07 3.18
2114 4266 7.016153 ACCACTAGGAATGTATTTTGAGTGA 57.984 36.000 0.00 0.00 36.07 3.41
2115 4267 7.687941 AACCACTAGGAATGTATTTTGAGTG 57.312 36.000 0.00 0.00 38.69 3.51
2116 4268 8.706322 AAAACCACTAGGAATGTATTTTGAGT 57.294 30.769 0.00 0.00 38.69 3.41
2139 4291 0.996583 ATCCCCGCCTCACCTAAAAA 59.003 50.000 0.00 0.00 0.00 1.94
2140 4292 0.254747 CATCCCCGCCTCACCTAAAA 59.745 55.000 0.00 0.00 0.00 1.52
2141 4293 0.912487 ACATCCCCGCCTCACCTAAA 60.912 55.000 0.00 0.00 0.00 1.85
2142 4294 1.306654 ACATCCCCGCCTCACCTAA 60.307 57.895 0.00 0.00 0.00 2.69
2143 4295 2.063979 CACATCCCCGCCTCACCTA 61.064 63.158 0.00 0.00 0.00 3.08
2144 4296 3.402681 CACATCCCCGCCTCACCT 61.403 66.667 0.00 0.00 0.00 4.00
2145 4297 4.489771 CCACATCCCCGCCTCACC 62.490 72.222 0.00 0.00 0.00 4.02
2146 4298 3.268103 AACCACATCCCCGCCTCAC 62.268 63.158 0.00 0.00 0.00 3.51
2147 4299 2.933287 AACCACATCCCCGCCTCA 60.933 61.111 0.00 0.00 0.00 3.86
2148 4300 2.438434 CAACCACATCCCCGCCTC 60.438 66.667 0.00 0.00 0.00 4.70
2149 4301 4.047125 CCAACCACATCCCCGCCT 62.047 66.667 0.00 0.00 0.00 5.52
2150 4302 3.879180 AACCAACCACATCCCCGCC 62.879 63.158 0.00 0.00 0.00 6.13
2151 4303 1.873270 GAAACCAACCACATCCCCGC 61.873 60.000 0.00 0.00 0.00 6.13
2152 4304 0.538516 TGAAACCAACCACATCCCCG 60.539 55.000 0.00 0.00 0.00 5.73
2153 4305 1.618343 CTTGAAACCAACCACATCCCC 59.382 52.381 0.00 0.00 0.00 4.81
2154 4306 2.593026 TCTTGAAACCAACCACATCCC 58.407 47.619 0.00 0.00 0.00 3.85
2155 4307 5.010282 AGTATCTTGAAACCAACCACATCC 58.990 41.667 0.00 0.00 0.00 3.51
2156 4308 7.681939 TTAGTATCTTGAAACCAACCACATC 57.318 36.000 0.00 0.00 0.00 3.06
2157 4309 7.122650 CCATTAGTATCTTGAAACCAACCACAT 59.877 37.037 0.00 0.00 0.00 3.21
2158 4310 6.432783 CCATTAGTATCTTGAAACCAACCACA 59.567 38.462 0.00 0.00 0.00 4.17
2159 4311 6.127730 CCCATTAGTATCTTGAAACCAACCAC 60.128 42.308 0.00 0.00 0.00 4.16
2160 4312 5.949354 CCCATTAGTATCTTGAAACCAACCA 59.051 40.000 0.00 0.00 0.00 3.67
2161 4313 5.949952 ACCCATTAGTATCTTGAAACCAACC 59.050 40.000 0.00 0.00 0.00 3.77
2162 4314 7.462571 AACCCATTAGTATCTTGAAACCAAC 57.537 36.000 0.00 0.00 0.00 3.77
2163 4315 8.485578 AAAACCCATTAGTATCTTGAAACCAA 57.514 30.769 0.00 0.00 0.00 3.67
2164 4316 7.947890 AGAAAACCCATTAGTATCTTGAAACCA 59.052 33.333 0.00 0.00 0.00 3.67
2165 4317 8.244113 CAGAAAACCCATTAGTATCTTGAAACC 58.756 37.037 0.00 0.00 0.00 3.27
2166 4318 8.793592 ACAGAAAACCCATTAGTATCTTGAAAC 58.206 33.333 0.00 0.00 0.00 2.78
2167 4319 8.934023 ACAGAAAACCCATTAGTATCTTGAAA 57.066 30.769 0.00 0.00 0.00 2.69
2176 4328 8.957466 GCTCTAATTTACAGAAAACCCATTAGT 58.043 33.333 0.00 0.00 0.00 2.24
2177 4329 8.956426 TGCTCTAATTTACAGAAAACCCATTAG 58.044 33.333 0.00 0.00 0.00 1.73
2178 4330 8.871629 TGCTCTAATTTACAGAAAACCCATTA 57.128 30.769 0.00 0.00 0.00 1.90
2179 4331 7.669722 TCTGCTCTAATTTACAGAAAACCCATT 59.330 33.333 0.00 0.00 36.27 3.16
2180 4332 7.175104 TCTGCTCTAATTTACAGAAAACCCAT 58.825 34.615 0.00 0.00 36.27 4.00
2181 4333 6.539173 TCTGCTCTAATTTACAGAAAACCCA 58.461 36.000 0.00 0.00 36.27 4.51
2182 4334 6.879458 TCTCTGCTCTAATTTACAGAAAACCC 59.121 38.462 0.00 0.00 38.61 4.11
2183 4335 7.907214 TCTCTGCTCTAATTTACAGAAAACC 57.093 36.000 0.00 0.00 38.61 3.27
2184 4336 8.994170 ACTTCTCTGCTCTAATTTACAGAAAAC 58.006 33.333 0.00 0.00 38.61 2.43
2185 4337 8.993121 CACTTCTCTGCTCTAATTTACAGAAAA 58.007 33.333 0.00 0.00 38.61 2.29
2186 4338 7.604164 CCACTTCTCTGCTCTAATTTACAGAAA 59.396 37.037 0.00 0.00 38.61 2.52
2187 4339 7.099764 CCACTTCTCTGCTCTAATTTACAGAA 58.900 38.462 0.00 0.00 38.61 3.02
2188 4340 6.351371 CCCACTTCTCTGCTCTAATTTACAGA 60.351 42.308 0.00 0.00 37.57 3.41
2189 4341 5.814705 CCCACTTCTCTGCTCTAATTTACAG 59.185 44.000 0.00 0.00 0.00 2.74
2190 4342 5.338381 CCCCACTTCTCTGCTCTAATTTACA 60.338 44.000 0.00 0.00 0.00 2.41
2191 4343 5.119694 CCCCACTTCTCTGCTCTAATTTAC 58.880 45.833 0.00 0.00 0.00 2.01
2192 4344 4.783227 ACCCCACTTCTCTGCTCTAATTTA 59.217 41.667 0.00 0.00 0.00 1.40
2193 4345 3.589288 ACCCCACTTCTCTGCTCTAATTT 59.411 43.478 0.00 0.00 0.00 1.82
2194 4346 3.185455 ACCCCACTTCTCTGCTCTAATT 58.815 45.455 0.00 0.00 0.00 1.40
2195 4347 2.839228 ACCCCACTTCTCTGCTCTAAT 58.161 47.619 0.00 0.00 0.00 1.73
2196 4348 2.327325 ACCCCACTTCTCTGCTCTAA 57.673 50.000 0.00 0.00 0.00 2.10
2197 4349 2.327325 AACCCCACTTCTCTGCTCTA 57.673 50.000 0.00 0.00 0.00 2.43
2198 4350 1.439543 AAACCCCACTTCTCTGCTCT 58.560 50.000 0.00 0.00 0.00 4.09
2199 4351 1.882623 CAAAACCCCACTTCTCTGCTC 59.117 52.381 0.00 0.00 0.00 4.26
2200 4352 1.215423 ACAAAACCCCACTTCTCTGCT 59.785 47.619 0.00 0.00 0.00 4.24
2201 4353 1.692411 ACAAAACCCCACTTCTCTGC 58.308 50.000 0.00 0.00 0.00 4.26
2202 4354 2.223805 GCAACAAAACCCCACTTCTCTG 60.224 50.000 0.00 0.00 0.00 3.35
2203 4355 2.031870 GCAACAAAACCCCACTTCTCT 58.968 47.619 0.00 0.00 0.00 3.10
2204 4356 1.754226 TGCAACAAAACCCCACTTCTC 59.246 47.619 0.00 0.00 0.00 2.87
2205 4357 1.859302 TGCAACAAAACCCCACTTCT 58.141 45.000 0.00 0.00 0.00 2.85
2206 4358 2.682155 TTGCAACAAAACCCCACTTC 57.318 45.000 0.00 0.00 0.00 3.01
2207 4359 3.425162 TTTTGCAACAAAACCCCACTT 57.575 38.095 0.00 0.00 0.00 3.16
2208 4360 3.425162 TTTTTGCAACAAAACCCCACT 57.575 38.095 0.00 0.00 0.00 4.00
2209 4361 3.441922 ACATTTTTGCAACAAAACCCCAC 59.558 39.130 0.00 0.00 0.00 4.61
2210 4362 3.690460 ACATTTTTGCAACAAAACCCCA 58.310 36.364 0.00 0.00 0.00 4.96
2211 4363 3.691609 TGACATTTTTGCAACAAAACCCC 59.308 39.130 0.00 0.00 0.00 4.95
2212 4364 4.154918 TGTGACATTTTTGCAACAAAACCC 59.845 37.500 0.00 0.00 0.00 4.11
2213 4365 5.288543 TGTGACATTTTTGCAACAAAACC 57.711 34.783 0.00 0.00 0.00 3.27
2214 4366 4.787591 GCTGTGACATTTTTGCAACAAAAC 59.212 37.500 0.00 0.00 0.00 2.43
2215 4367 4.694509 AGCTGTGACATTTTTGCAACAAAA 59.305 33.333 0.00 0.00 0.00 2.44
2216 4368 4.252073 AGCTGTGACATTTTTGCAACAAA 58.748 34.783 0.00 3.95 0.00 2.83
2217 4369 3.859443 AGCTGTGACATTTTTGCAACAA 58.141 36.364 0.00 0.00 0.00 2.83
2218 4370 3.523606 AGCTGTGACATTTTTGCAACA 57.476 38.095 0.00 0.00 0.00 3.33
2219 4371 4.209080 GGTAAGCTGTGACATTTTTGCAAC 59.791 41.667 0.00 0.00 0.00 4.17
2220 4372 4.099266 AGGTAAGCTGTGACATTTTTGCAA 59.901 37.500 0.00 0.00 0.00 4.08
2221 4373 3.636300 AGGTAAGCTGTGACATTTTTGCA 59.364 39.130 0.00 0.00 0.00 4.08
2222 4374 4.229876 GAGGTAAGCTGTGACATTTTTGC 58.770 43.478 0.00 0.00 0.00 3.68
2223 4375 5.215160 GTGAGGTAAGCTGTGACATTTTTG 58.785 41.667 0.00 0.00 0.00 2.44
2224 4376 4.887071 TGTGAGGTAAGCTGTGACATTTTT 59.113 37.500 0.00 0.00 0.00 1.94
2225 4377 4.460263 TGTGAGGTAAGCTGTGACATTTT 58.540 39.130 0.00 0.00 0.00 1.82
2226 4378 4.067896 CTGTGAGGTAAGCTGTGACATTT 58.932 43.478 0.00 0.00 0.00 2.32
2227 4379 3.071602 ACTGTGAGGTAAGCTGTGACATT 59.928 43.478 0.00 0.00 0.00 2.71
2228 4380 2.634940 ACTGTGAGGTAAGCTGTGACAT 59.365 45.455 0.00 0.00 0.00 3.06
2229 4381 2.035961 GACTGTGAGGTAAGCTGTGACA 59.964 50.000 0.00 0.00 0.00 3.58
2230 4382 2.678324 GACTGTGAGGTAAGCTGTGAC 58.322 52.381 0.00 0.00 0.00 3.67
2231 4383 1.269723 CGACTGTGAGGTAAGCTGTGA 59.730 52.381 0.00 0.00 0.00 3.58
2232 4384 1.000163 ACGACTGTGAGGTAAGCTGTG 60.000 52.381 0.00 0.00 0.00 3.66
2233 4385 1.329256 ACGACTGTGAGGTAAGCTGT 58.671 50.000 0.00 0.00 0.00 4.40
2234 4386 2.440539 AACGACTGTGAGGTAAGCTG 57.559 50.000 0.00 0.00 0.00 4.24
2235 4387 3.418995 TCTAACGACTGTGAGGTAAGCT 58.581 45.455 0.00 0.00 0.00 3.74
2236 4388 3.844577 TCTAACGACTGTGAGGTAAGC 57.155 47.619 0.00 0.00 0.00 3.09
2237 4389 4.106197 GCATCTAACGACTGTGAGGTAAG 58.894 47.826 0.00 0.00 0.00 2.34
2238 4390 3.508402 TGCATCTAACGACTGTGAGGTAA 59.492 43.478 0.00 0.00 0.00 2.85
2239 4391 3.086282 TGCATCTAACGACTGTGAGGTA 58.914 45.455 0.00 0.00 0.00 3.08
2240 4392 1.893137 TGCATCTAACGACTGTGAGGT 59.107 47.619 0.00 0.00 0.00 3.85
2241 4393 2.164422 TCTGCATCTAACGACTGTGAGG 59.836 50.000 0.00 0.00 0.00 3.86
2242 4394 3.494045 TCTGCATCTAACGACTGTGAG 57.506 47.619 0.00 0.00 0.00 3.51
2243 4395 3.696548 AGATCTGCATCTAACGACTGTGA 59.303 43.478 0.00 0.00 37.63 3.58
2244 4396 3.795639 CAGATCTGCATCTAACGACTGTG 59.204 47.826 10.38 0.00 37.25 3.66
2245 4397 3.696548 TCAGATCTGCATCTAACGACTGT 59.303 43.478 18.36 0.00 37.25 3.55
2246 4398 4.298744 TCAGATCTGCATCTAACGACTG 57.701 45.455 18.36 0.00 37.25 3.51
2247 4399 4.261952 CCATCAGATCTGCATCTAACGACT 60.262 45.833 18.36 0.00 37.25 4.18
2248 4400 3.986572 CCATCAGATCTGCATCTAACGAC 59.013 47.826 18.36 0.00 37.25 4.34
2249 4401 3.638627 ACCATCAGATCTGCATCTAACGA 59.361 43.478 18.36 0.00 37.25 3.85
2250 4402 3.986572 GACCATCAGATCTGCATCTAACG 59.013 47.826 18.36 1.99 37.25 3.18
2251 4403 4.953667 TGACCATCAGATCTGCATCTAAC 58.046 43.478 18.36 6.54 37.25 2.34
2264 4416 4.495349 GCATTCATCGTTTCTGACCATCAG 60.495 45.833 0.00 0.00 45.59 2.90
2265 4417 3.374988 GCATTCATCGTTTCTGACCATCA 59.625 43.478 0.00 0.00 0.00 3.07
2266 4418 3.242870 GGCATTCATCGTTTCTGACCATC 60.243 47.826 0.00 0.00 0.00 3.51
2267 4419 2.684881 GGCATTCATCGTTTCTGACCAT 59.315 45.455 0.00 0.00 0.00 3.55
2268 4420 2.083774 GGCATTCATCGTTTCTGACCA 58.916 47.619 0.00 0.00 0.00 4.02
2269 4421 2.083774 TGGCATTCATCGTTTCTGACC 58.916 47.619 0.00 0.00 0.00 4.02
2270 4422 3.002791 TCTGGCATTCATCGTTTCTGAC 58.997 45.455 0.00 0.00 0.00 3.51
2271 4423 3.002791 GTCTGGCATTCATCGTTTCTGA 58.997 45.455 0.00 0.00 0.00 3.27
2272 4424 2.743664 TGTCTGGCATTCATCGTTTCTG 59.256 45.455 0.00 0.00 0.00 3.02
2273 4425 2.744202 GTGTCTGGCATTCATCGTTTCT 59.256 45.455 0.00 0.00 0.00 2.52
2274 4426 2.483877 TGTGTCTGGCATTCATCGTTTC 59.516 45.455 0.00 0.00 0.00 2.78
2275 4427 2.226437 GTGTGTCTGGCATTCATCGTTT 59.774 45.455 0.00 0.00 0.00 3.60
2276 4428 1.806542 GTGTGTCTGGCATTCATCGTT 59.193 47.619 0.00 0.00 0.00 3.85
2277 4429 1.270785 TGTGTGTCTGGCATTCATCGT 60.271 47.619 0.00 0.00 0.00 3.73
2278 4430 1.441738 TGTGTGTCTGGCATTCATCG 58.558 50.000 0.00 0.00 0.00 3.84
2279 4431 3.441222 TGATTGTGTGTCTGGCATTCATC 59.559 43.478 0.00 0.00 0.00 2.92
2280 4432 3.423749 TGATTGTGTGTCTGGCATTCAT 58.576 40.909 0.00 0.00 0.00 2.57
2281 4433 2.861274 TGATTGTGTGTCTGGCATTCA 58.139 42.857 0.00 0.00 0.00 2.57
2282 4434 3.441222 TGATGATTGTGTGTCTGGCATTC 59.559 43.478 0.00 0.00 0.00 2.67
2283 4435 3.192001 GTGATGATTGTGTGTCTGGCATT 59.808 43.478 0.00 0.00 0.00 3.56
2284 4436 2.751259 GTGATGATTGTGTGTCTGGCAT 59.249 45.455 0.00 0.00 0.00 4.40
2285 4437 2.153645 GTGATGATTGTGTGTCTGGCA 58.846 47.619 0.00 0.00 0.00 4.92
2286 4438 1.470098 GGTGATGATTGTGTGTCTGGC 59.530 52.381 0.00 0.00 0.00 4.85
2287 4439 2.781923 TGGTGATGATTGTGTGTCTGG 58.218 47.619 0.00 0.00 0.00 3.86
2288 4440 3.817084 AGTTGGTGATGATTGTGTGTCTG 59.183 43.478 0.00 0.00 0.00 3.51
2289 4441 4.090761 AGTTGGTGATGATTGTGTGTCT 57.909 40.909 0.00 0.00 0.00 3.41
2290 4442 5.470098 ACTTAGTTGGTGATGATTGTGTGTC 59.530 40.000 0.00 0.00 0.00 3.67
2291 4443 5.376625 ACTTAGTTGGTGATGATTGTGTGT 58.623 37.500 0.00 0.00 0.00 3.72
2292 4444 5.702670 AGACTTAGTTGGTGATGATTGTGTG 59.297 40.000 0.00 0.00 0.00 3.82
2293 4445 5.869579 AGACTTAGTTGGTGATGATTGTGT 58.130 37.500 0.00 0.00 0.00 3.72
2294 4446 6.808008 AAGACTTAGTTGGTGATGATTGTG 57.192 37.500 0.00 0.00 0.00 3.33
2295 4447 7.823745 AAAAGACTTAGTTGGTGATGATTGT 57.176 32.000 0.00 0.00 0.00 2.71
2313 4465 9.815936 GCTCGTATCTCTACTTCTATAAAAGAC 57.184 37.037 0.00 0.00 32.51 3.01
2314 4466 9.001542 GGCTCGTATCTCTACTTCTATAAAAGA 57.998 37.037 0.00 0.00 0.00 2.52
2315 4467 8.238631 GGGCTCGTATCTCTACTTCTATAAAAG 58.761 40.741 0.00 0.00 0.00 2.27
2316 4468 7.722728 TGGGCTCGTATCTCTACTTCTATAAAA 59.277 37.037 0.00 0.00 0.00 1.52
2317 4469 7.174599 GTGGGCTCGTATCTCTACTTCTATAAA 59.825 40.741 0.00 0.00 0.00 1.40
2318 4470 6.654161 GTGGGCTCGTATCTCTACTTCTATAA 59.346 42.308 0.00 0.00 0.00 0.98
2319 4471 6.171921 GTGGGCTCGTATCTCTACTTCTATA 58.828 44.000 0.00 0.00 0.00 1.31
2320 4472 5.005094 GTGGGCTCGTATCTCTACTTCTAT 58.995 45.833 0.00 0.00 0.00 1.98
2321 4473 4.387598 GTGGGCTCGTATCTCTACTTCTA 58.612 47.826 0.00 0.00 0.00 2.10
2322 4474 3.215975 GTGGGCTCGTATCTCTACTTCT 58.784 50.000 0.00 0.00 0.00 2.85
2323 4475 2.293955 GGTGGGCTCGTATCTCTACTTC 59.706 54.545 0.00 0.00 0.00 3.01
2324 4476 2.308690 GGTGGGCTCGTATCTCTACTT 58.691 52.381 0.00 0.00 0.00 2.24
2325 4477 1.214673 TGGTGGGCTCGTATCTCTACT 59.785 52.381 0.00 0.00 0.00 2.57
2326 4478 1.609555 CTGGTGGGCTCGTATCTCTAC 59.390 57.143 0.00 0.00 0.00 2.59
2327 4479 1.478837 CCTGGTGGGCTCGTATCTCTA 60.479 57.143 0.00 0.00 0.00 2.43
2328 4480 0.757188 CCTGGTGGGCTCGTATCTCT 60.757 60.000 0.00 0.00 0.00 3.10
2329 4481 1.742768 CCTGGTGGGCTCGTATCTC 59.257 63.158 0.00 0.00 0.00 2.75
2330 4482 3.956377 CCTGGTGGGCTCGTATCT 58.044 61.111 0.00 0.00 0.00 1.98
2374 4526 7.425834 ACATATATGTGATAGAGATGGGACCT 58.574 38.462 17.60 0.00 40.03 3.85
2467 4620 8.662781 TCTCTGGTAAGCATATTCAACATTAC 57.337 34.615 0.00 0.00 0.00 1.89
2471 4624 7.129457 AGATCTCTGGTAAGCATATTCAACA 57.871 36.000 0.00 0.00 0.00 3.33


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.