Multiple sequence alignment - TraesCS4D01G178100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G178100 chr4D 100.000 2827 0 0 1 2827 309626841 309629667 0.000000e+00 5221.0
1 TraesCS4D01G178100 chr4D 96.382 304 11 0 442 745 204711002 204711305 4.200000e-138 501.0
2 TraesCS4D01G178100 chr4D 91.429 105 4 2 210 310 204710496 204710599 3.800000e-29 139.0
3 TraesCS4D01G178100 chr4D 89.691 97 8 2 2732 2827 391616396 391616491 3.820000e-24 122.0
4 TraesCS4D01G178100 chr4D 100.000 54 0 0 2561 2614 309629344 309629397 1.790000e-17 100.0
5 TraesCS4D01G178100 chr4B 95.590 907 28 3 1063 1969 386491166 386492060 0.000000e+00 1443.0
6 TraesCS4D01G178100 chr4B 91.667 156 11 2 2420 2573 386492815 386492970 6.130000e-52 215.0
7 TraesCS4D01G178100 chr4B 94.167 120 3 1 2317 2436 386492038 386492153 2.240000e-41 180.0
8 TraesCS4D01G178100 chr4B 97.183 71 2 0 974 1044 386491110 386491180 1.380000e-23 121.0
9 TraesCS4D01G178100 chr4B 96.154 52 2 0 19 70 386491053 386491104 5.020000e-13 86.1
10 TraesCS4D01G178100 chr4B 90.323 62 6 0 914 975 265978945 265978884 6.490000e-12 82.4
11 TraesCS4D01G178100 chr4A 94.690 904 25 3 1066 1969 165411959 165411079 0.000000e+00 1382.0
12 TraesCS4D01G178100 chr4A 92.045 352 24 2 1962 2310 554641812 554641462 2.530000e-135 492.0
13 TraesCS4D01G178100 chr4A 91.954 348 25 1 1966 2310 85901079 85900732 4.230000e-133 484.0
14 TraesCS4D01G178100 chr4A 90.204 245 9 3 2317 2561 165411101 165410872 3.540000e-79 305.0
15 TraesCS4D01G178100 chr4A 88.764 178 20 0 2561 2738 165410929 165410752 4.740000e-53 219.0
16 TraesCS4D01G178100 chr4A 91.398 93 7 1 2476 2567 690358226 690358134 2.960000e-25 126.0
17 TraesCS4D01G178100 chr4A 95.161 62 3 0 2561 2622 690358198 690358137 6.450000e-17 99.0
18 TraesCS4D01G178100 chr4A 100.000 40 0 0 1005 1044 165411987 165411948 1.090000e-09 75.0
19 TraesCS4D01G178100 chr4A 97.674 43 1 0 23 65 165412061 165412019 1.090000e-09 75.0
20 TraesCS4D01G178100 chr7D 95.620 822 32 3 100 920 479708966 479708148 0.000000e+00 1315.0
21 TraesCS4D01G178100 chr7D 94.253 348 17 1 1966 2310 393041071 393041418 1.930000e-146 529.0
22 TraesCS4D01G178100 chr7D 74.368 554 100 26 440 974 551783186 551782656 6.180000e-47 198.0
23 TraesCS4D01G178100 chr7D 74.157 356 58 26 367 698 40895943 40895598 1.780000e-22 117.0
24 TraesCS4D01G178100 chr1D 94.066 573 29 4 65 634 350662381 350662951 0.000000e+00 865.0
25 TraesCS4D01G178100 chr1D 91.544 272 22 1 636 907 350662868 350663138 9.560000e-100 374.0
26 TraesCS4D01G178100 chr6D 92.543 523 28 4 123 634 436232018 436232540 0.000000e+00 739.0
27 TraesCS4D01G178100 chr6D 97.697 304 7 0 442 745 143407685 143407382 8.970000e-145 523.0
28 TraesCS4D01G178100 chr6D 97.039 304 9 0 442 745 445521252 445520949 1.940000e-141 512.0
29 TraesCS4D01G178100 chr6D 92.837 349 21 3 1966 2310 317480514 317480166 1.170000e-138 503.0
30 TraesCS4D01G178100 chr6D 91.667 348 26 1 1966 2310 11898439 11898786 1.970000e-131 479.0
31 TraesCS4D01G178100 chr6D 91.544 272 22 1 636 907 436232457 436232727 9.560000e-100 374.0
32 TraesCS4D01G178100 chr6D 95.000 100 4 1 210 309 445522160 445522062 3.770000e-34 156.0
33 TraesCS4D01G178100 chr6D 92.157 102 5 2 210 309 143408189 143408089 1.060000e-29 141.0
34 TraesCS4D01G178100 chr6D 92.308 91 6 1 2737 2826 456280473 456280563 8.220000e-26 128.0
35 TraesCS4D01G178100 chr2D 97.697 304 7 0 442 745 577999673 577999370 8.970000e-145 523.0
36 TraesCS4D01G178100 chr2D 97.368 304 8 0 442 745 136527504 136527201 4.170000e-143 518.0
37 TraesCS4D01G178100 chr2D 91.736 242 15 2 72 309 578000317 578000077 5.840000e-87 331.0
38 TraesCS4D01G178100 chr5A 94.186 344 17 1 1968 2308 106686671 106687014 3.230000e-144 521.0
39 TraesCS4D01G178100 chr5A 91.954 87 7 0 2475 2561 493202163 493202077 3.820000e-24 122.0
40 TraesCS4D01G178100 chr5D 97.368 304 8 0 442 745 458779537 458779234 4.170000e-143 518.0
41 TraesCS4D01G178100 chr5D 79.918 244 37 9 731 973 525458889 525458657 4.840000e-38 169.0
42 TraesCS4D01G178100 chr3D 93.103 348 21 1 1966 2310 441430719 441431066 9.040000e-140 507.0
43 TraesCS4D01G178100 chr3D 92.308 91 5 2 2737 2826 239142934 239143023 8.220000e-26 128.0
44 TraesCS4D01G178100 chr3D 92.308 91 6 1 2737 2827 480128381 480128470 8.220000e-26 128.0
45 TraesCS4D01G178100 chr3A 92.330 352 24 1 1962 2310 670666949 670666598 5.440000e-137 497.0
46 TraesCS4D01G178100 chr5B 91.954 348 25 1 1966 2310 529119550 529119203 4.230000e-133 484.0
47 TraesCS4D01G178100 chr5B 93.103 87 6 0 2475 2561 382536773 382536687 8.220000e-26 128.0
48 TraesCS4D01G178100 chr5B 73.280 378 74 16 363 720 94241351 94241721 2.300000e-21 113.0
49 TraesCS4D01G178100 chr5B 95.000 60 3 0 2561 2620 382536744 382536685 8.340000e-16 95.3
50 TraesCS4D01G178100 chr6A 74.820 556 94 30 440 974 358161556 358162086 2.850000e-50 209.0
51 TraesCS4D01G178100 chr3B 85.938 192 19 5 371 554 416857038 416857229 6.180000e-47 198.0
52 TraesCS4D01G178100 chr3B 89.423 104 10 1 2471 2573 283640231 283640128 2.290000e-26 130.0
53 TraesCS4D01G178100 chr3B 95.161 62 3 0 2561 2622 283640198 283640137 6.450000e-17 99.0
54 TraesCS4D01G178100 chr1A 74.234 555 96 32 440 974 441926377 441925850 3.720000e-44 189.0
55 TraesCS4D01G178100 chr1B 94.444 90 3 2 2738 2826 291967749 291967837 1.370000e-28 137.0
56 TraesCS4D01G178100 chr6B 89.623 106 10 1 2469 2573 671130506 671130401 1.770000e-27 134.0
57 TraesCS4D01G178100 chr6B 90.000 100 9 1 2475 2573 708222285 708222186 8.220000e-26 128.0
58 TraesCS4D01G178100 chr6B 95.161 62 3 0 2561 2622 671130471 671130410 6.450000e-17 99.0
59 TraesCS4D01G178100 chr6B 95.161 62 3 0 2561 2622 708222256 708222195 6.450000e-17 99.0
60 TraesCS4D01G178100 chr6B 90.323 62 6 0 914 975 448298314 448298375 6.490000e-12 82.4
61 TraesCS4D01G178100 chr2A 91.489 94 6 2 2734 2826 488003430 488003522 8.220000e-26 128.0
62 TraesCS4D01G178100 chr2B 92.222 90 6 1 2738 2826 31581556 31581467 2.960000e-25 126.0
63 TraesCS4D01G178100 chr2B 91.429 70 5 1 368 437 713474582 713474514 8.340000e-16 95.3
64 TraesCS4D01G178100 chr2B 95.556 45 2 0 929 973 65168800 65168844 3.910000e-09 73.1
65 TraesCS4D01G178100 chr2B 97.500 40 1 0 936 975 472155351 472155390 5.050000e-08 69.4
66 TraesCS4D01G178100 chrUn 92.135 89 5 2 2739 2826 45985329 45985242 1.060000e-24 124.0
67 TraesCS4D01G178100 chrUn 90.426 94 8 1 2475 2567 50975888 50975981 3.820000e-24 122.0
68 TraesCS4D01G178100 chrUn 90.426 94 8 1 2475 2567 466482544 466482637 3.820000e-24 122.0
69 TraesCS4D01G178100 chrUn 88.776 98 10 1 2730 2826 97120911 97121008 4.950000e-23 119.0
70 TraesCS4D01G178100 chrUn 95.161 62 3 0 2561 2622 50975917 50975978 6.450000e-17 99.0
71 TraesCS4D01G178100 chrUn 95.161 62 3 0 2561 2622 466482573 466482634 6.450000e-17 99.0
72 TraesCS4D01G178100 chr7B 88.710 62 7 0 914 975 42647247 42647308 3.020000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G178100 chr4D 309626841 309629667 2826 False 2660.50 5221 100.0000 1 2827 2 chr4D.!!$F3 2826
1 TraesCS4D01G178100 chr4D 204710496 204711305 809 False 320.00 501 93.9055 210 745 2 chr4D.!!$F2 535
2 TraesCS4D01G178100 chr4B 386491053 386492970 1917 False 409.02 1443 94.9522 19 2573 5 chr4B.!!$F1 2554
3 TraesCS4D01G178100 chr4A 165410752 165412061 1309 True 411.20 1382 94.2664 23 2738 5 chr4A.!!$R3 2715
4 TraesCS4D01G178100 chr7D 479708148 479708966 818 True 1315.00 1315 95.6200 100 920 1 chr7D.!!$R2 820
5 TraesCS4D01G178100 chr1D 350662381 350663138 757 False 619.50 865 92.8050 65 907 2 chr1D.!!$F1 842
6 TraesCS4D01G178100 chr6D 436232018 436232727 709 False 556.50 739 92.0435 123 907 2 chr6D.!!$F3 784
7 TraesCS4D01G178100 chr6D 445520949 445522160 1211 True 334.00 512 96.0195 210 745 2 chr6D.!!$R3 535
8 TraesCS4D01G178100 chr6D 143407382 143408189 807 True 332.00 523 94.9270 210 745 2 chr6D.!!$R2 535
9 TraesCS4D01G178100 chr2D 577999370 578000317 947 True 427.00 523 94.7165 72 745 2 chr2D.!!$R2 673
10 TraesCS4D01G178100 chr6A 358161556 358162086 530 False 209.00 209 74.8200 440 974 1 chr6A.!!$F1 534

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
70 71 0.99347 ACCTGGGTGCCGGTTAATTA 59.007 50.0 1.9 0.0 29.08 1.4 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2068 2911 0.035152 TCGTAGCGAGGGTAGAACCA 60.035 55.0 0.0 0.0 41.02 3.67 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
70 71 0.993470 ACCTGGGTGCCGGTTAATTA 59.007 50.000 1.90 0.00 29.08 1.40
81 82 4.217983 TGCCGGTTAATTAATGGAAAACGT 59.782 37.500 18.57 0.00 30.27 3.99
172 173 2.032528 CGCTCCCAACAGCCTCAA 59.967 61.111 0.00 0.00 35.84 3.02
185 186 3.840666 ACAGCCTCAACCTTATCTCTTCA 59.159 43.478 0.00 0.00 0.00 3.02
200 201 1.229951 TTCACCTCCAGCCCTCCAT 60.230 57.895 0.00 0.00 0.00 3.41
221 222 1.539124 ACCGCTCCCTCCTTTTCCT 60.539 57.895 0.00 0.00 0.00 3.36
238 239 4.868172 TTCCTCTTTCCATGGATCACAT 57.132 40.909 17.06 0.00 41.57 3.21
398 900 3.606662 CCCCGTCGATCTCGCCAT 61.607 66.667 0.00 0.00 39.60 4.40
579 1287 1.226686 ACTCTCAAAGCTGCAGTGCG 61.227 55.000 16.64 6.61 38.13 5.34
657 1453 3.838271 CTGGCGGGCTCGAAGCTA 61.838 66.667 12.03 0.00 41.99 3.32
850 1647 4.813235 GGGTGGCTAATGCGGGCA 62.813 66.667 0.00 0.00 40.82 5.36
917 1715 1.050204 GGGCTGAGATGAGCAGATCT 58.950 55.000 0.00 0.00 41.08 2.75
920 1718 2.546373 GGCTGAGATGAGCAGATCTGAC 60.546 54.545 27.04 18.19 41.08 3.51
923 1721 1.680735 GAGATGAGCAGATCTGACGGT 59.319 52.381 27.04 8.75 32.57 4.83
945 1743 1.517832 CGACCCGGCTGATTTCTCT 59.482 57.895 0.00 0.00 0.00 3.10
976 1774 2.699954 CCGGTTGATTTGTAGCAGTCT 58.300 47.619 0.00 0.00 0.00 3.24
1044 1875 0.178981 AGTCAACAAGCACAGGCCAT 60.179 50.000 5.01 0.00 42.56 4.40
1045 1876 0.242017 GTCAACAAGCACAGGCCATC 59.758 55.000 5.01 0.00 42.56 3.51
1046 1877 0.178995 TCAACAAGCACAGGCCATCA 60.179 50.000 5.01 0.00 42.56 3.07
1047 1878 0.892755 CAACAAGCACAGGCCATCAT 59.107 50.000 5.01 0.00 42.56 2.45
1048 1879 1.274167 CAACAAGCACAGGCCATCATT 59.726 47.619 5.01 0.00 42.56 2.57
1049 1880 1.180029 ACAAGCACAGGCCATCATTC 58.820 50.000 5.01 0.00 42.56 2.67
1050 1881 0.099968 CAAGCACAGGCCATCATTCG 59.900 55.000 5.01 0.00 42.56 3.34
1051 1882 1.660560 AAGCACAGGCCATCATTCGC 61.661 55.000 5.01 0.00 42.56 4.70
1052 1883 2.409055 GCACAGGCCATCATTCGCA 61.409 57.895 5.01 0.00 0.00 5.10
1053 1884 1.936436 GCACAGGCCATCATTCGCAA 61.936 55.000 5.01 0.00 0.00 4.85
1054 1885 0.527113 CACAGGCCATCATTCGCAAA 59.473 50.000 5.01 0.00 0.00 3.68
1055 1886 1.067706 CACAGGCCATCATTCGCAAAA 60.068 47.619 5.01 0.00 0.00 2.44
1056 1887 1.617850 ACAGGCCATCATTCGCAAAAA 59.382 42.857 5.01 0.00 0.00 1.94
1075 1906 3.459232 AAAAGAAAAGAAGCACAGGCC 57.541 42.857 0.00 0.00 42.56 5.19
1076 1907 2.071778 AAGAAAAGAAGCACAGGCCA 57.928 45.000 5.01 0.00 42.56 5.36
1129 1960 4.789123 GCCCCTTCCGCGCCTTAA 62.789 66.667 0.00 0.00 0.00 1.85
1130 1961 2.513897 CCCCTTCCGCGCCTTAAG 60.514 66.667 0.00 2.71 0.00 1.85
1592 2423 1.633774 ACTCATGGTCCAACGACTCT 58.366 50.000 0.00 0.00 39.15 3.24
1760 2603 4.436998 CCCACGTCTGAGGCCGAC 62.437 72.222 0.00 0.00 0.00 4.79
1853 2696 2.168621 CGTGCGTGTGCTTCTTCG 59.831 61.111 0.00 0.00 43.34 3.79
1918 2761 4.998672 TGTAGTACGTGGCAAAGCTTATTT 59.001 37.500 0.00 0.00 0.00 1.40
1969 2812 9.026074 CGTGTGTAAGGATGTTTATTTGTTTTT 57.974 29.630 0.00 0.00 0.00 1.94
1993 2836 8.745464 TTTTTGCGGGTAGAAATTTGTATTAC 57.255 30.769 0.00 0.00 0.00 1.89
1994 2837 7.690952 TTTGCGGGTAGAAATTTGTATTACT 57.309 32.000 0.00 0.00 0.00 2.24
1995 2838 6.913873 TGCGGGTAGAAATTTGTATTACTC 57.086 37.500 0.00 0.00 0.00 2.59
1996 2839 6.408035 TGCGGGTAGAAATTTGTATTACTCA 58.592 36.000 0.00 0.00 0.00 3.41
1997 2840 6.879993 TGCGGGTAGAAATTTGTATTACTCAA 59.120 34.615 0.00 0.00 0.00 3.02
1998 2841 7.390996 TGCGGGTAGAAATTTGTATTACTCAAA 59.609 33.333 0.00 0.00 38.77 2.69
1999 2842 8.238631 GCGGGTAGAAATTTGTATTACTCAAAA 58.761 33.333 0.00 0.00 38.11 2.44
2000 2843 9.550811 CGGGTAGAAATTTGTATTACTCAAAAC 57.449 33.333 0.00 0.00 38.11 2.43
2001 2844 9.850628 GGGTAGAAATTTGTATTACTCAAAACC 57.149 33.333 0.00 0.00 38.11 3.27
2009 2852 7.739498 TTGTATTACTCAAAACCTCAAGTCC 57.261 36.000 0.00 0.00 0.00 3.85
2010 2853 7.074653 TGTATTACTCAAAACCTCAAGTCCT 57.925 36.000 0.00 0.00 0.00 3.85
2011 2854 7.514721 TGTATTACTCAAAACCTCAAGTCCTT 58.485 34.615 0.00 0.00 0.00 3.36
2012 2855 8.653191 TGTATTACTCAAAACCTCAAGTCCTTA 58.347 33.333 0.00 0.00 0.00 2.69
2013 2856 7.981102 ATTACTCAAAACCTCAAGTCCTTAC 57.019 36.000 0.00 0.00 0.00 2.34
2014 2857 5.367945 ACTCAAAACCTCAAGTCCTTACA 57.632 39.130 0.00 0.00 0.00 2.41
2015 2858 5.751586 ACTCAAAACCTCAAGTCCTTACAA 58.248 37.500 0.00 0.00 0.00 2.41
2016 2859 6.365520 ACTCAAAACCTCAAGTCCTTACAAT 58.634 36.000 0.00 0.00 0.00 2.71
2017 2860 6.486993 ACTCAAAACCTCAAGTCCTTACAATC 59.513 38.462 0.00 0.00 0.00 2.67
2018 2861 5.768164 TCAAAACCTCAAGTCCTTACAATCC 59.232 40.000 0.00 0.00 0.00 3.01
2019 2862 4.993705 AACCTCAAGTCCTTACAATCCA 57.006 40.909 0.00 0.00 0.00 3.41
2020 2863 5.520748 AACCTCAAGTCCTTACAATCCAT 57.479 39.130 0.00 0.00 0.00 3.41
2021 2864 5.104259 ACCTCAAGTCCTTACAATCCATC 57.896 43.478 0.00 0.00 0.00 3.51
2022 2865 4.122776 CCTCAAGTCCTTACAATCCATCG 58.877 47.826 0.00 0.00 0.00 3.84
2023 2866 3.531538 TCAAGTCCTTACAATCCATCGC 58.468 45.455 0.00 0.00 0.00 4.58
2024 2867 3.055458 TCAAGTCCTTACAATCCATCGCA 60.055 43.478 0.00 0.00 0.00 5.10
2025 2868 3.185246 AGTCCTTACAATCCATCGCAG 57.815 47.619 0.00 0.00 0.00 5.18
2026 2869 1.599542 GTCCTTACAATCCATCGCAGC 59.400 52.381 0.00 0.00 0.00 5.25
2027 2870 0.947244 CCTTACAATCCATCGCAGCC 59.053 55.000 0.00 0.00 0.00 4.85
2028 2871 1.667236 CTTACAATCCATCGCAGCCA 58.333 50.000 0.00 0.00 0.00 4.75
2029 2872 2.016318 CTTACAATCCATCGCAGCCAA 58.984 47.619 0.00 0.00 0.00 4.52
2030 2873 2.121291 TACAATCCATCGCAGCCAAA 57.879 45.000 0.00 0.00 0.00 3.28
2031 2874 1.477553 ACAATCCATCGCAGCCAAAT 58.522 45.000 0.00 0.00 0.00 2.32
2032 2875 1.826720 ACAATCCATCGCAGCCAAATT 59.173 42.857 0.00 0.00 0.00 1.82
2033 2876 2.159198 ACAATCCATCGCAGCCAAATTC 60.159 45.455 0.00 0.00 0.00 2.17
2034 2877 1.766494 ATCCATCGCAGCCAAATTCA 58.234 45.000 0.00 0.00 0.00 2.57
2035 2878 1.543607 TCCATCGCAGCCAAATTCAA 58.456 45.000 0.00 0.00 0.00 2.69
2036 2879 1.891811 TCCATCGCAGCCAAATTCAAA 59.108 42.857 0.00 0.00 0.00 2.69
2037 2880 2.094597 TCCATCGCAGCCAAATTCAAAG 60.095 45.455 0.00 0.00 0.00 2.77
2038 2881 1.657094 CATCGCAGCCAAATTCAAAGC 59.343 47.619 0.00 0.00 0.00 3.51
2039 2882 0.672889 TCGCAGCCAAATTCAAAGCA 59.327 45.000 0.00 0.00 0.00 3.91
2040 2883 1.273048 TCGCAGCCAAATTCAAAGCAT 59.727 42.857 0.00 0.00 0.00 3.79
2041 2884 1.657094 CGCAGCCAAATTCAAAGCATC 59.343 47.619 0.00 0.00 0.00 3.91
2042 2885 2.673043 CGCAGCCAAATTCAAAGCATCT 60.673 45.455 0.00 0.00 0.00 2.90
2043 2886 2.671396 GCAGCCAAATTCAAAGCATCTG 59.329 45.455 0.00 0.00 0.00 2.90
2044 2887 3.259064 CAGCCAAATTCAAAGCATCTGG 58.741 45.455 0.00 0.00 0.00 3.86
2045 2888 3.056393 CAGCCAAATTCAAAGCATCTGGA 60.056 43.478 0.00 0.00 0.00 3.86
2046 2889 3.194968 AGCCAAATTCAAAGCATCTGGAG 59.805 43.478 0.00 0.00 0.00 3.86
2047 2890 3.677976 GCCAAATTCAAAGCATCTGGAGG 60.678 47.826 0.00 0.00 0.00 4.30
2048 2891 3.512724 CCAAATTCAAAGCATCTGGAGGT 59.487 43.478 0.00 0.00 0.00 3.85
2049 2892 4.381292 CCAAATTCAAAGCATCTGGAGGTC 60.381 45.833 0.00 0.00 0.00 3.85
2050 2893 2.496899 TTCAAAGCATCTGGAGGTCC 57.503 50.000 0.00 0.00 0.00 4.46
2051 2894 0.620556 TCAAAGCATCTGGAGGTCCC 59.379 55.000 0.00 0.00 34.29 4.46
2052 2895 0.745845 CAAAGCATCTGGAGGTCCCG 60.746 60.000 0.00 0.00 37.93 5.14
2053 2896 0.909610 AAAGCATCTGGAGGTCCCGA 60.910 55.000 0.00 0.00 37.93 5.14
2054 2897 0.909610 AAGCATCTGGAGGTCCCGAA 60.910 55.000 0.00 0.00 37.93 4.30
2055 2898 1.153349 GCATCTGGAGGTCCCGAAC 60.153 63.158 0.00 0.00 37.93 3.95
2064 2907 3.668386 GTCCCGAACCAAGCCAAG 58.332 61.111 0.00 0.00 0.00 3.61
2065 2908 1.228154 GTCCCGAACCAAGCCAAGT 60.228 57.895 0.00 0.00 0.00 3.16
2066 2909 1.072505 TCCCGAACCAAGCCAAGTC 59.927 57.895 0.00 0.00 0.00 3.01
2067 2910 1.228124 CCCGAACCAAGCCAAGTCA 60.228 57.895 0.00 0.00 0.00 3.41
2068 2911 0.609131 CCCGAACCAAGCCAAGTCAT 60.609 55.000 0.00 0.00 0.00 3.06
2069 2912 0.523072 CCGAACCAAGCCAAGTCATG 59.477 55.000 0.00 0.00 0.00 3.07
2080 2923 3.268023 CCAAGTCATGGTTCTACCCTC 57.732 52.381 0.00 0.00 44.85 4.30
2081 2924 2.418746 CCAAGTCATGGTTCTACCCTCG 60.419 54.545 0.00 0.00 44.85 4.63
2082 2925 0.824759 AGTCATGGTTCTACCCTCGC 59.175 55.000 0.00 0.00 37.50 5.03
2083 2926 0.824759 GTCATGGTTCTACCCTCGCT 59.175 55.000 0.00 0.00 37.50 4.93
2084 2927 2.029623 GTCATGGTTCTACCCTCGCTA 58.970 52.381 0.00 0.00 37.50 4.26
2085 2928 2.029623 TCATGGTTCTACCCTCGCTAC 58.970 52.381 0.00 0.00 37.50 3.58
2086 2929 1.030457 ATGGTTCTACCCTCGCTACG 58.970 55.000 0.00 0.00 37.50 3.51
2087 2930 0.035152 TGGTTCTACCCTCGCTACGA 60.035 55.000 0.00 0.00 37.50 3.43
2162 3005 9.959749 TGAGTAATACAAAAATCACAAAAGGAC 57.040 29.630 0.00 0.00 0.00 3.85
2163 3006 9.959749 GAGTAATACAAAAATCACAAAAGGACA 57.040 29.630 0.00 0.00 0.00 4.02
2168 3011 9.883142 ATACAAAAATCACAAAAGGACAAAAGA 57.117 25.926 0.00 0.00 0.00 2.52
2169 3012 8.791327 ACAAAAATCACAAAAGGACAAAAGAT 57.209 26.923 0.00 0.00 0.00 2.40
2170 3013 9.883142 ACAAAAATCACAAAAGGACAAAAGATA 57.117 25.926 0.00 0.00 0.00 1.98
2180 3023 9.727627 CAAAAGGACAAAAGATATCTAATCTGC 57.272 33.333 5.46 0.00 0.00 4.26
2181 3024 9.692325 AAAAGGACAAAAGATATCTAATCTGCT 57.308 29.630 5.46 0.00 0.00 4.24
2182 3025 9.692325 AAAGGACAAAAGATATCTAATCTGCTT 57.308 29.630 5.46 3.87 0.00 3.91
2183 3026 8.674263 AGGACAAAAGATATCTAATCTGCTTG 57.326 34.615 5.46 4.44 32.46 4.01
2184 3027 8.489489 AGGACAAAAGATATCTAATCTGCTTGA 58.511 33.333 5.46 0.00 31.51 3.02
2185 3028 9.282569 GGACAAAAGATATCTAATCTGCTTGAT 57.717 33.333 5.46 0.00 36.89 2.57
2187 3030 9.064706 ACAAAAGATATCTAATCTGCTTGATGG 57.935 33.333 5.46 0.00 35.21 3.51
2188 3031 9.281371 CAAAAGATATCTAATCTGCTTGATGGA 57.719 33.333 5.46 0.00 35.21 3.41
2189 3032 8.845413 AAAGATATCTAATCTGCTTGATGGAC 57.155 34.615 5.46 0.00 35.21 4.02
2190 3033 6.629128 AGATATCTAATCTGCTTGATGGACG 58.371 40.000 2.53 0.00 35.21 4.79
2191 3034 4.944619 ATCTAATCTGCTTGATGGACGA 57.055 40.909 0.00 0.00 35.21 4.20
2192 3035 4.313277 TCTAATCTGCTTGATGGACGAG 57.687 45.455 0.00 0.00 35.21 4.18
2199 3042 0.443869 CTTGATGGACGAGCAAACCG 59.556 55.000 0.00 0.00 27.00 4.44
2200 3043 0.034198 TTGATGGACGAGCAAACCGA 59.966 50.000 0.00 0.00 0.00 4.69
2201 3044 0.249120 TGATGGACGAGCAAACCGAT 59.751 50.000 0.00 0.00 0.00 4.18
2202 3045 0.931005 GATGGACGAGCAAACCGATC 59.069 55.000 0.00 0.00 0.00 3.69
2203 3046 0.537188 ATGGACGAGCAAACCGATCT 59.463 50.000 0.00 0.00 0.00 2.75
2204 3047 0.389817 TGGACGAGCAAACCGATCTG 60.390 55.000 0.00 0.00 0.00 2.90
2205 3048 0.389948 GGACGAGCAAACCGATCTGT 60.390 55.000 0.00 0.00 0.00 3.41
2206 3049 0.992802 GACGAGCAAACCGATCTGTC 59.007 55.000 0.00 0.00 0.00 3.51
2207 3050 0.317160 ACGAGCAAACCGATCTGTCA 59.683 50.000 0.00 0.00 0.00 3.58
2208 3051 1.270094 ACGAGCAAACCGATCTGTCAA 60.270 47.619 0.00 0.00 0.00 3.18
2209 3052 1.126846 CGAGCAAACCGATCTGTCAAC 59.873 52.381 0.00 0.00 0.00 3.18
2210 3053 2.143122 GAGCAAACCGATCTGTCAACA 58.857 47.619 0.00 0.00 0.00 3.33
2211 3054 2.744202 GAGCAAACCGATCTGTCAACAT 59.256 45.455 0.00 0.00 0.00 2.71
2212 3055 2.744202 AGCAAACCGATCTGTCAACATC 59.256 45.455 0.00 0.00 0.00 3.06
2213 3056 2.744202 GCAAACCGATCTGTCAACATCT 59.256 45.455 0.00 0.00 0.00 2.90
2214 3057 3.425359 GCAAACCGATCTGTCAACATCTG 60.425 47.826 0.00 0.00 0.00 2.90
2215 3058 3.961480 AACCGATCTGTCAACATCTGA 57.039 42.857 0.00 0.00 0.00 3.27
2216 3059 3.961480 ACCGATCTGTCAACATCTGAA 57.039 42.857 0.00 0.00 35.22 3.02
2217 3060 3.854666 ACCGATCTGTCAACATCTGAAG 58.145 45.455 0.00 0.00 35.22 3.02
2218 3061 2.606725 CCGATCTGTCAACATCTGAAGC 59.393 50.000 0.00 0.00 35.22 3.86
2219 3062 3.519579 CGATCTGTCAACATCTGAAGCT 58.480 45.455 0.00 0.00 35.22 3.74
2220 3063 3.931468 CGATCTGTCAACATCTGAAGCTT 59.069 43.478 0.00 0.00 35.22 3.74
2221 3064 4.201695 CGATCTGTCAACATCTGAAGCTTG 60.202 45.833 2.10 0.00 35.22 4.01
2222 3065 4.341366 TCTGTCAACATCTGAAGCTTGA 57.659 40.909 2.10 0.00 35.22 3.02
2223 3066 4.707105 TCTGTCAACATCTGAAGCTTGAA 58.293 39.130 2.10 0.00 35.22 2.69
2224 3067 5.311265 TCTGTCAACATCTGAAGCTTGAAT 58.689 37.500 2.10 0.00 35.22 2.57
2225 3068 5.410746 TCTGTCAACATCTGAAGCTTGAATC 59.589 40.000 2.10 0.00 35.22 2.52
2226 3069 5.065235 TGTCAACATCTGAAGCTTGAATCA 58.935 37.500 2.10 0.00 35.22 2.57
2227 3070 5.532032 TGTCAACATCTGAAGCTTGAATCAA 59.468 36.000 2.10 0.00 35.22 2.57
2228 3071 6.208007 TGTCAACATCTGAAGCTTGAATCAAT 59.792 34.615 2.10 0.00 35.22 2.57
2229 3072 7.088905 GTCAACATCTGAAGCTTGAATCAATT 58.911 34.615 2.10 0.00 35.22 2.32
2230 3073 7.597743 GTCAACATCTGAAGCTTGAATCAATTT 59.402 33.333 2.10 0.00 35.22 1.82
2231 3074 8.145767 TCAACATCTGAAGCTTGAATCAATTTT 58.854 29.630 2.10 0.00 0.00 1.82
2232 3075 9.414295 CAACATCTGAAGCTTGAATCAATTTTA 57.586 29.630 2.10 0.00 0.00 1.52
2233 3076 8.976986 ACATCTGAAGCTTGAATCAATTTTAC 57.023 30.769 2.10 0.00 0.00 2.01
2234 3077 8.800332 ACATCTGAAGCTTGAATCAATTTTACT 58.200 29.630 2.10 0.00 0.00 2.24
2235 3078 9.073368 CATCTGAAGCTTGAATCAATTTTACTG 57.927 33.333 2.10 0.00 0.00 2.74
2236 3079 7.086376 TCTGAAGCTTGAATCAATTTTACTGC 58.914 34.615 2.10 0.00 0.00 4.40
2237 3080 6.158598 TGAAGCTTGAATCAATTTTACTGCC 58.841 36.000 2.10 0.00 0.00 4.85
2238 3081 5.726980 AGCTTGAATCAATTTTACTGCCA 57.273 34.783 0.00 0.00 0.00 4.92
2239 3082 6.290294 AGCTTGAATCAATTTTACTGCCAT 57.710 33.333 0.00 0.00 0.00 4.40
2240 3083 6.704310 AGCTTGAATCAATTTTACTGCCATT 58.296 32.000 0.00 0.00 0.00 3.16
2241 3084 7.839907 AGCTTGAATCAATTTTACTGCCATTA 58.160 30.769 0.00 0.00 0.00 1.90
2242 3085 7.977853 AGCTTGAATCAATTTTACTGCCATTAG 59.022 33.333 0.00 0.00 0.00 1.73
2243 3086 7.975616 GCTTGAATCAATTTTACTGCCATTAGA 59.024 33.333 0.00 0.00 0.00 2.10
2244 3087 9.512435 CTTGAATCAATTTTACTGCCATTAGAG 57.488 33.333 0.00 0.00 0.00 2.43
2245 3088 8.806429 TGAATCAATTTTACTGCCATTAGAGA 57.194 30.769 0.00 0.00 0.00 3.10
2246 3089 8.896744 TGAATCAATTTTACTGCCATTAGAGAG 58.103 33.333 0.00 0.00 0.00 3.20
2247 3090 8.814038 AATCAATTTTACTGCCATTAGAGAGT 57.186 30.769 0.00 0.00 0.00 3.24
2248 3091 7.849804 TCAATTTTACTGCCATTAGAGAGTC 57.150 36.000 0.00 0.00 0.00 3.36
2249 3092 6.823689 TCAATTTTACTGCCATTAGAGAGTCC 59.176 38.462 0.00 0.00 0.00 3.85
2250 3093 5.755409 TTTTACTGCCATTAGAGAGTCCA 57.245 39.130 0.00 0.00 0.00 4.02
2251 3094 5.957771 TTTACTGCCATTAGAGAGTCCAT 57.042 39.130 0.00 0.00 0.00 3.41
2252 3095 5.537300 TTACTGCCATTAGAGAGTCCATC 57.463 43.478 0.00 0.00 0.00 3.51
2253 3096 3.652055 ACTGCCATTAGAGAGTCCATCT 58.348 45.455 0.00 0.00 42.61 2.90
2263 3106 3.051081 AGAGTCCATCTCAACTTGCAC 57.949 47.619 0.00 0.00 44.98 4.57
2264 3107 2.636893 AGAGTCCATCTCAACTTGCACT 59.363 45.455 0.00 0.00 44.98 4.40
2265 3108 3.834813 AGAGTCCATCTCAACTTGCACTA 59.165 43.478 0.00 0.00 44.98 2.74
2266 3109 4.081752 AGAGTCCATCTCAACTTGCACTAG 60.082 45.833 0.00 0.00 44.98 2.57
2267 3110 2.675348 GTCCATCTCAACTTGCACTAGC 59.325 50.000 0.00 0.00 42.57 3.42
2268 3111 7.806695 GAGTCCATCTCAACTTGCACTAGCA 62.807 48.000 0.00 0.00 44.92 3.49
2283 3126 4.996976 GCAAGTCGCTTCTCTGGA 57.003 55.556 0.00 0.00 37.77 3.86
2284 3127 3.450028 GCAAGTCGCTTCTCTGGAT 57.550 52.632 0.00 0.00 37.77 3.41
2285 3128 2.586258 GCAAGTCGCTTCTCTGGATA 57.414 50.000 0.00 0.00 37.77 2.59
2286 3129 2.468831 GCAAGTCGCTTCTCTGGATAG 58.531 52.381 0.00 0.00 37.77 2.08
2287 3130 2.099921 GCAAGTCGCTTCTCTGGATAGA 59.900 50.000 0.00 0.00 37.77 1.98
2288 3131 3.429547 GCAAGTCGCTTCTCTGGATAGAA 60.430 47.826 0.00 0.00 37.77 2.10
2289 3132 4.748892 CAAGTCGCTTCTCTGGATAGAAA 58.251 43.478 0.00 0.00 35.14 2.52
2290 3133 5.171476 CAAGTCGCTTCTCTGGATAGAAAA 58.829 41.667 0.00 0.00 35.14 2.29
2291 3134 5.004922 AGTCGCTTCTCTGGATAGAAAAG 57.995 43.478 0.00 0.00 34.72 2.27
2292 3135 4.116238 GTCGCTTCTCTGGATAGAAAAGG 58.884 47.826 0.00 0.00 32.68 3.11
2293 3136 4.023980 TCGCTTCTCTGGATAGAAAAGGA 58.976 43.478 0.00 0.00 32.68 3.36
2294 3137 4.651503 TCGCTTCTCTGGATAGAAAAGGAT 59.348 41.667 0.00 0.00 32.68 3.24
2295 3138 5.833667 TCGCTTCTCTGGATAGAAAAGGATA 59.166 40.000 0.00 0.00 32.68 2.59
2296 3139 6.015856 TCGCTTCTCTGGATAGAAAAGGATAG 60.016 42.308 0.00 0.00 32.68 2.08
2297 3140 6.015856 CGCTTCTCTGGATAGAAAAGGATAGA 60.016 42.308 0.00 0.00 32.68 1.98
2298 3141 7.151976 GCTTCTCTGGATAGAAAAGGATAGAC 58.848 42.308 0.00 0.00 32.68 2.59
2299 3142 7.604657 TTCTCTGGATAGAAAAGGATAGACC 57.395 40.000 0.00 0.00 32.59 3.85
2300 3143 6.928202 TCTCTGGATAGAAAAGGATAGACCT 58.072 40.000 0.00 0.00 40.94 3.85
2312 3155 4.363991 GGATAGACCTTCCATGCATTCT 57.636 45.455 0.00 0.00 35.41 2.40
2313 3156 4.723309 GGATAGACCTTCCATGCATTCTT 58.277 43.478 0.00 0.00 35.41 2.52
2314 3157 5.136105 GGATAGACCTTCCATGCATTCTTT 58.864 41.667 0.00 0.00 35.41 2.52
2315 3158 5.009410 GGATAGACCTTCCATGCATTCTTTG 59.991 44.000 0.00 0.00 35.41 2.77
2316 3159 3.094572 AGACCTTCCATGCATTCTTTGG 58.905 45.455 0.00 0.00 0.00 3.28
2317 3160 2.827921 GACCTTCCATGCATTCTTTGGT 59.172 45.455 0.00 1.92 0.00 3.67
2318 3161 2.564062 ACCTTCCATGCATTCTTTGGTG 59.436 45.455 0.00 0.00 0.00 4.17
2319 3162 2.564062 CCTTCCATGCATTCTTTGGTGT 59.436 45.455 0.00 0.00 0.00 4.16
2320 3163 3.763360 CCTTCCATGCATTCTTTGGTGTA 59.237 43.478 0.00 0.00 0.00 2.90
2321 3164 4.220382 CCTTCCATGCATTCTTTGGTGTAA 59.780 41.667 0.00 0.00 0.00 2.41
2322 3165 5.389859 TTCCATGCATTCTTTGGTGTAAG 57.610 39.130 0.00 0.00 0.00 2.34
2323 3166 3.763360 TCCATGCATTCTTTGGTGTAAGG 59.237 43.478 0.00 0.00 0.00 2.69
2324 3167 3.763360 CCATGCATTCTTTGGTGTAAGGA 59.237 43.478 0.00 0.00 0.00 3.36
2325 3168 4.403432 CCATGCATTCTTTGGTGTAAGGAT 59.597 41.667 0.00 0.00 0.00 3.24
2326 3169 5.345702 CATGCATTCTTTGGTGTAAGGATG 58.654 41.667 0.00 0.00 41.93 3.51
2327 3170 4.406456 TGCATTCTTTGGTGTAAGGATGT 58.594 39.130 6.53 0.00 41.35 3.06
2328 3171 4.832266 TGCATTCTTTGGTGTAAGGATGTT 59.168 37.500 6.53 0.00 41.35 2.71
2329 3172 5.304101 TGCATTCTTTGGTGTAAGGATGTTT 59.696 36.000 6.53 0.00 41.35 2.83
2330 3173 6.491745 TGCATTCTTTGGTGTAAGGATGTTTA 59.508 34.615 6.53 0.00 41.35 2.01
2331 3174 7.178274 TGCATTCTTTGGTGTAAGGATGTTTAT 59.822 33.333 6.53 0.00 41.35 1.40
2332 3175 8.034804 GCATTCTTTGGTGTAAGGATGTTTATT 58.965 33.333 6.53 0.00 41.35 1.40
2333 3176 9.927668 CATTCTTTGGTGTAAGGATGTTTATTT 57.072 29.630 0.00 0.00 36.69 1.40
2334 3177 9.927668 ATTCTTTGGTGTAAGGATGTTTATTTG 57.072 29.630 0.00 0.00 0.00 2.32
2335 3178 8.472007 TCTTTGGTGTAAGGATGTTTATTTGT 57.528 30.769 0.00 0.00 0.00 2.83
2336 3179 8.919145 TCTTTGGTGTAAGGATGTTTATTTGTT 58.081 29.630 0.00 0.00 0.00 2.83
2337 3180 9.541143 CTTTGGTGTAAGGATGTTTATTTGTTT 57.459 29.630 0.00 0.00 0.00 2.83
2338 3181 9.892130 TTTGGTGTAAGGATGTTTATTTGTTTT 57.108 25.926 0.00 0.00 0.00 2.43
2339 3182 9.535878 TTGGTGTAAGGATGTTTATTTGTTTTC 57.464 29.630 0.00 0.00 0.00 2.29
2340 3183 8.919145 TGGTGTAAGGATGTTTATTTGTTTTCT 58.081 29.630 0.00 0.00 0.00 2.52
2488 4009 1.208535 CCCTACCGCTGTGTTTGGATA 59.791 52.381 0.00 0.00 0.00 2.59
2521 4042 5.598005 ACTGTTTGGAATTGAATTGGACTGA 59.402 36.000 0.00 0.00 0.00 3.41
2528 4049 7.160726 TGGAATTGAATTGGACTGAAAATTCC 58.839 34.615 14.44 14.44 46.08 3.01
2529 4050 7.160726 GGAATTGAATTGGACTGAAAATTCCA 58.839 34.615 15.80 0.00 45.58 3.53
2536 4057 6.491714 TTGGACTGAAAATTCCAAATCCAA 57.508 33.333 15.19 15.19 46.70 3.53
2537 4058 6.100404 TGGACTGAAAATTCCAAATCCAAG 57.900 37.500 9.31 0.00 39.04 3.61
2538 4059 5.837979 TGGACTGAAAATTCCAAATCCAAGA 59.162 36.000 9.31 0.00 39.04 3.02
2539 4060 6.497954 TGGACTGAAAATTCCAAATCCAAGAT 59.502 34.615 9.31 0.00 39.04 2.40
2540 4061 6.815142 GGACTGAAAATTCCAAATCCAAGATG 59.185 38.462 0.00 0.00 0.00 2.90
2541 4062 6.704310 ACTGAAAATTCCAAATCCAAGATGG 58.296 36.000 0.00 0.00 39.43 3.51
2553 4074 3.711863 TCCAAGATGGAAAGGAAATGGG 58.288 45.455 0.00 0.00 45.00 4.00
2554 4075 2.767960 CCAAGATGGAAAGGAAATGGGG 59.232 50.000 0.00 0.00 40.96 4.96
2555 4076 3.444029 CAAGATGGAAAGGAAATGGGGT 58.556 45.455 0.00 0.00 0.00 4.95
2556 4077 3.388552 AGATGGAAAGGAAATGGGGTC 57.611 47.619 0.00 0.00 0.00 4.46
2557 4078 2.024414 GATGGAAAGGAAATGGGGTCG 58.976 52.381 0.00 0.00 0.00 4.79
2558 4079 1.068948 TGGAAAGGAAATGGGGTCGA 58.931 50.000 0.00 0.00 0.00 4.20
2559 4080 1.425831 TGGAAAGGAAATGGGGTCGAA 59.574 47.619 0.00 0.00 0.00 3.71
2560 4081 2.042433 TGGAAAGGAAATGGGGTCGAAT 59.958 45.455 0.00 0.00 0.00 3.34
2561 4082 2.427095 GGAAAGGAAATGGGGTCGAATG 59.573 50.000 0.00 0.00 0.00 2.67
2562 4083 2.143876 AAGGAAATGGGGTCGAATGG 57.856 50.000 0.00 0.00 0.00 3.16
2563 4084 1.295020 AGGAAATGGGGTCGAATGGA 58.705 50.000 0.00 0.00 0.00 3.41
2564 4085 1.638589 AGGAAATGGGGTCGAATGGAA 59.361 47.619 0.00 0.00 0.00 3.53
2565 4086 2.244769 AGGAAATGGGGTCGAATGGAAT 59.755 45.455 0.00 0.00 0.00 3.01
2566 4087 3.031013 GGAAATGGGGTCGAATGGAATT 58.969 45.455 0.00 0.00 40.93 2.17
2567 4088 3.181476 GGAAATGGGGTCGAATGGAATTG 60.181 47.826 0.00 0.00 36.07 2.32
2568 4089 3.380471 AATGGGGTCGAATGGAATTGA 57.620 42.857 0.00 0.00 36.07 2.57
2569 4090 2.889170 TGGGGTCGAATGGAATTGAA 57.111 45.000 0.00 0.00 36.07 2.69
2570 4091 3.380471 TGGGGTCGAATGGAATTGAAT 57.620 42.857 0.00 0.00 36.07 2.57
2571 4092 3.707316 TGGGGTCGAATGGAATTGAATT 58.293 40.909 0.00 0.00 36.07 2.17
2572 4093 3.446873 TGGGGTCGAATGGAATTGAATTG 59.553 43.478 0.00 0.00 36.07 2.32
2573 4094 3.181476 GGGGTCGAATGGAATTGAATTGG 60.181 47.826 0.00 0.00 36.07 3.16
2574 4095 3.699038 GGGTCGAATGGAATTGAATTGGA 59.301 43.478 0.00 0.00 36.07 3.53
2575 4096 4.440112 GGGTCGAATGGAATTGAATTGGAC 60.440 45.833 12.68 12.68 36.07 4.02
2576 4097 4.399303 GGTCGAATGGAATTGAATTGGACT 59.601 41.667 17.17 0.00 39.82 3.85
2577 4098 5.335127 GTCGAATGGAATTGAATTGGACTG 58.665 41.667 13.35 0.00 36.07 3.51
2578 4099 5.123820 GTCGAATGGAATTGAATTGGACTGA 59.876 40.000 13.35 0.00 36.07 3.41
2579 4100 5.709631 TCGAATGGAATTGAATTGGACTGAA 59.290 36.000 0.00 0.00 36.07 3.02
2580 4101 6.208402 TCGAATGGAATTGAATTGGACTGAAA 59.792 34.615 0.00 0.00 36.07 2.69
2581 4102 6.867816 CGAATGGAATTGAATTGGACTGAAAA 59.132 34.615 0.00 0.00 36.07 2.29
2582 4103 7.546667 CGAATGGAATTGAATTGGACTGAAAAT 59.453 33.333 0.00 0.00 36.07 1.82
2583 4104 9.223099 GAATGGAATTGAATTGGACTGAAAATT 57.777 29.630 0.00 0.00 36.07 1.82
2584 4105 8.782339 ATGGAATTGAATTGGACTGAAAATTC 57.218 30.769 0.00 0.00 41.25 2.17
2616 4137 1.077005 TGGAAAGGAAATGGGGTCCAG 59.923 52.381 0.00 0.00 36.75 3.86
2657 4178 1.451504 CTCAGGTGGGTGCTCACAA 59.548 57.895 4.48 0.00 39.27 3.33
2662 4183 1.963515 AGGTGGGTGCTCACAATTTTC 59.036 47.619 4.48 0.00 39.27 2.29
2664 4185 3.153919 GGTGGGTGCTCACAATTTTCTA 58.846 45.455 4.48 0.00 39.27 2.10
2665 4186 3.191371 GGTGGGTGCTCACAATTTTCTAG 59.809 47.826 4.48 0.00 39.27 2.43
2703 4224 0.607217 GTGTTCGGGGTTAGTTGGGG 60.607 60.000 0.00 0.00 0.00 4.96
2708 4229 2.681591 GGGTTAGTTGGGGGAGGC 59.318 66.667 0.00 0.00 0.00 4.70
2709 4230 2.235761 GGGTTAGTTGGGGGAGGCA 61.236 63.158 0.00 0.00 0.00 4.75
2712 4233 1.685180 GGTTAGTTGGGGGAGGCATTC 60.685 57.143 0.00 0.00 0.00 2.67
2713 4234 0.629058 TTAGTTGGGGGAGGCATTCC 59.371 55.000 0.00 0.00 46.00 3.01
2723 4244 0.674534 GAGGCATTCCCGTCGACTAT 59.325 55.000 14.70 0.00 39.21 2.12
2738 4259 2.223595 CGACTATGAGACGCCTGTGATT 60.224 50.000 0.00 0.00 0.00 2.57
2739 4260 3.735208 CGACTATGAGACGCCTGTGATTT 60.735 47.826 0.00 0.00 0.00 2.17
2740 4261 4.184629 GACTATGAGACGCCTGTGATTTT 58.815 43.478 0.00 0.00 0.00 1.82
2741 4262 4.579869 ACTATGAGACGCCTGTGATTTTT 58.420 39.130 0.00 0.00 0.00 1.94
2742 4263 4.631813 ACTATGAGACGCCTGTGATTTTTC 59.368 41.667 0.00 0.00 0.00 2.29
2743 4264 3.126001 TGAGACGCCTGTGATTTTTCT 57.874 42.857 0.00 0.00 0.00 2.52
2744 4265 3.067106 TGAGACGCCTGTGATTTTTCTC 58.933 45.455 0.00 0.00 0.00 2.87
2745 4266 2.069273 AGACGCCTGTGATTTTTCTCG 58.931 47.619 0.00 0.00 0.00 4.04
2746 4267 2.066262 GACGCCTGTGATTTTTCTCGA 58.934 47.619 0.00 0.00 0.00 4.04
2747 4268 2.673368 GACGCCTGTGATTTTTCTCGAT 59.327 45.455 0.00 0.00 0.00 3.59
2748 4269 3.857052 ACGCCTGTGATTTTTCTCGATA 58.143 40.909 0.00 0.00 0.00 2.92
2749 4270 4.250464 ACGCCTGTGATTTTTCTCGATAA 58.750 39.130 0.00 0.00 0.00 1.75
2750 4271 4.693566 ACGCCTGTGATTTTTCTCGATAAA 59.306 37.500 0.00 0.00 0.00 1.40
2751 4272 5.163854 ACGCCTGTGATTTTTCTCGATAAAG 60.164 40.000 0.00 0.00 0.00 1.85
2752 4273 5.573146 GCCTGTGATTTTTCTCGATAAAGG 58.427 41.667 0.00 0.00 0.00 3.11
2753 4274 5.354234 GCCTGTGATTTTTCTCGATAAAGGA 59.646 40.000 0.00 0.00 0.00 3.36
2754 4275 6.038714 GCCTGTGATTTTTCTCGATAAAGGAT 59.961 38.462 0.00 0.00 0.00 3.24
2755 4276 7.412853 CCTGTGATTTTTCTCGATAAAGGATG 58.587 38.462 0.00 0.00 0.00 3.51
2756 4277 7.320443 TGTGATTTTTCTCGATAAAGGATGG 57.680 36.000 0.00 0.00 0.00 3.51
2757 4278 6.884295 TGTGATTTTTCTCGATAAAGGATGGT 59.116 34.615 0.00 0.00 0.00 3.55
2758 4279 7.393234 TGTGATTTTTCTCGATAAAGGATGGTT 59.607 33.333 0.00 0.00 0.00 3.67
2759 4280 8.244113 GTGATTTTTCTCGATAAAGGATGGTTT 58.756 33.333 0.00 0.00 0.00 3.27
2760 4281 8.802267 TGATTTTTCTCGATAAAGGATGGTTTT 58.198 29.630 0.00 0.00 0.00 2.43
2761 4282 9.639601 GATTTTTCTCGATAAAGGATGGTTTTT 57.360 29.630 0.00 0.00 0.00 1.94
2766 4287 9.456147 TTCTCGATAAAGGATGGTTTTTATTCA 57.544 29.630 0.00 0.00 31.50 2.57
2767 4288 8.889717 TCTCGATAAAGGATGGTTTTTATTCAC 58.110 33.333 0.00 0.00 31.50 3.18
2768 4289 8.801882 TCGATAAAGGATGGTTTTTATTCACT 57.198 30.769 0.00 0.00 31.50 3.41
2769 4290 8.889717 TCGATAAAGGATGGTTTTTATTCACTC 58.110 33.333 0.00 0.00 31.50 3.51
2770 4291 8.673711 CGATAAAGGATGGTTTTTATTCACTCA 58.326 33.333 0.00 0.00 31.50 3.41
2774 4295 9.492973 AAAGGATGGTTTTTATTCACTCAAATG 57.507 29.630 0.00 0.00 0.00 2.32
2775 4296 7.614494 AGGATGGTTTTTATTCACTCAAATGG 58.386 34.615 0.00 0.00 0.00 3.16
2776 4297 7.454380 AGGATGGTTTTTATTCACTCAAATGGA 59.546 33.333 0.00 0.00 0.00 3.41
2791 4312 6.932356 TCAAATGGAGCATCAAGAAGATAC 57.068 37.500 0.00 0.00 36.25 2.24
2792 4313 6.417258 TCAAATGGAGCATCAAGAAGATACA 58.583 36.000 0.00 0.00 36.25 2.29
2793 4314 6.885918 TCAAATGGAGCATCAAGAAGATACAA 59.114 34.615 0.00 0.00 36.25 2.41
2794 4315 7.394077 TCAAATGGAGCATCAAGAAGATACAAA 59.606 33.333 0.00 0.00 36.25 2.83
2795 4316 6.690194 ATGGAGCATCAAGAAGATACAAAC 57.310 37.500 0.00 0.00 36.25 2.93
2796 4317 5.559770 TGGAGCATCAAGAAGATACAAACA 58.440 37.500 0.00 0.00 36.25 2.83
2797 4318 5.412594 TGGAGCATCAAGAAGATACAAACAC 59.587 40.000 0.00 0.00 36.25 3.32
2798 4319 5.412594 GGAGCATCAAGAAGATACAAACACA 59.587 40.000 0.00 0.00 36.25 3.72
2799 4320 6.072508 GGAGCATCAAGAAGATACAAACACAA 60.073 38.462 0.00 0.00 36.25 3.33
2800 4321 7.362401 GGAGCATCAAGAAGATACAAACACAAT 60.362 37.037 0.00 0.00 36.25 2.71
2801 4322 7.310664 AGCATCAAGAAGATACAAACACAATG 58.689 34.615 0.00 0.00 34.43 2.82
2802 4323 7.175467 AGCATCAAGAAGATACAAACACAATGA 59.825 33.333 0.00 0.00 34.43 2.57
2803 4324 7.484007 GCATCAAGAAGATACAAACACAATGAG 59.516 37.037 0.00 0.00 34.43 2.90
2804 4325 6.902341 TCAAGAAGATACAAACACAATGAGC 58.098 36.000 0.00 0.00 0.00 4.26
2805 4326 6.486320 TCAAGAAGATACAAACACAATGAGCA 59.514 34.615 0.00 0.00 0.00 4.26
2806 4327 6.246420 AGAAGATACAAACACAATGAGCAC 57.754 37.500 0.00 0.00 0.00 4.40
2807 4328 5.764686 AGAAGATACAAACACAATGAGCACA 59.235 36.000 0.00 0.00 0.00 4.57
2808 4329 5.362556 AGATACAAACACAATGAGCACAC 57.637 39.130 0.00 0.00 0.00 3.82
2809 4330 4.821260 AGATACAAACACAATGAGCACACA 59.179 37.500 0.00 0.00 0.00 3.72
2810 4331 3.149436 ACAAACACAATGAGCACACAC 57.851 42.857 0.00 0.00 0.00 3.82
2811 4332 2.159254 ACAAACACAATGAGCACACACC 60.159 45.455 0.00 0.00 0.00 4.16
2812 4333 1.032014 AACACAATGAGCACACACCC 58.968 50.000 0.00 0.00 0.00 4.61
2813 4334 1.165907 ACACAATGAGCACACACCCG 61.166 55.000 0.00 0.00 0.00 5.28
2814 4335 1.600636 ACAATGAGCACACACCCGG 60.601 57.895 0.00 0.00 0.00 5.73
2815 4336 2.672996 AATGAGCACACACCCGGC 60.673 61.111 0.00 0.00 0.00 6.13
2816 4337 4.722700 ATGAGCACACACCCGGCC 62.723 66.667 0.00 0.00 0.00 6.13
2820 4341 3.702048 GCACACACCCGGCCTCTA 61.702 66.667 0.00 0.00 0.00 2.43
2821 4342 2.264794 CACACACCCGGCCTCTAC 59.735 66.667 0.00 0.00 0.00 2.59
2822 4343 2.203728 ACACACCCGGCCTCTACA 60.204 61.111 0.00 0.00 0.00 2.74
2823 4344 1.612442 ACACACCCGGCCTCTACAT 60.612 57.895 0.00 0.00 0.00 2.29
2824 4345 0.324923 ACACACCCGGCCTCTACATA 60.325 55.000 0.00 0.00 0.00 2.29
2825 4346 0.389391 CACACCCGGCCTCTACATAG 59.611 60.000 0.00 0.00 0.00 2.23
2826 4347 0.032416 ACACCCGGCCTCTACATAGT 60.032 55.000 0.00 0.00 0.00 2.12
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 7.612244 GGTCCAGATAGTATCAGCTATCAACTA 59.388 40.741 12.66 0.00 45.90 2.24
3 4 6.435904 GGTCCAGATAGTATCAGCTATCAACT 59.564 42.308 12.66 0.00 45.90 3.16
4 5 6.623986 CGGTCCAGATAGTATCAGCTATCAAC 60.624 46.154 12.66 9.04 45.90 3.18
6 7 4.944317 CGGTCCAGATAGTATCAGCTATCA 59.056 45.833 12.66 0.00 45.90 2.15
7 8 5.186942 TCGGTCCAGATAGTATCAGCTATC 58.813 45.833 12.66 5.27 44.60 2.08
9 10 4.635699 TCGGTCCAGATAGTATCAGCTA 57.364 45.455 12.66 0.00 0.00 3.32
10 11 3.510531 TCGGTCCAGATAGTATCAGCT 57.489 47.619 12.66 0.00 0.00 4.24
11 12 3.759086 TCATCGGTCCAGATAGTATCAGC 59.241 47.826 12.66 1.10 0.00 4.26
12 13 5.163571 CCATCATCGGTCCAGATAGTATCAG 60.164 48.000 12.66 4.30 0.00 2.90
13 14 4.706962 CCATCATCGGTCCAGATAGTATCA 59.293 45.833 12.66 0.00 0.00 2.15
14 15 4.440802 GCCATCATCGGTCCAGATAGTATC 60.441 50.000 1.55 1.55 0.00 2.24
15 16 3.449018 GCCATCATCGGTCCAGATAGTAT 59.551 47.826 0.00 0.00 0.00 2.12
16 17 2.826128 GCCATCATCGGTCCAGATAGTA 59.174 50.000 0.00 0.00 0.00 1.82
17 18 1.620819 GCCATCATCGGTCCAGATAGT 59.379 52.381 0.00 0.00 0.00 2.12
18 19 1.066573 GGCCATCATCGGTCCAGATAG 60.067 57.143 0.00 0.00 0.00 2.08
19 20 0.976641 GGCCATCATCGGTCCAGATA 59.023 55.000 0.00 0.00 0.00 1.98
20 21 1.056125 TGGCCATCATCGGTCCAGAT 61.056 55.000 0.00 0.00 31.30 2.90
21 22 1.056125 ATGGCCATCATCGGTCCAGA 61.056 55.000 14.09 0.00 36.22 3.86
61 62 8.510132 AAGAAACGTTTTCCATTAATTAACCG 57.490 30.769 15.89 0.00 0.00 4.44
89 90 0.609151 TCGTGGAAATCAGCCGGTAA 59.391 50.000 1.90 0.00 0.00 2.85
172 173 2.769095 GCTGGAGGTGAAGAGATAAGGT 59.231 50.000 0.00 0.00 0.00 3.50
185 186 3.415087 GCATGGAGGGCTGGAGGT 61.415 66.667 0.00 0.00 0.00 3.85
200 201 2.748058 GAAAAGGAGGGAGCGGTGCA 62.748 60.000 8.76 0.00 0.00 4.57
238 239 1.817520 CTCCTCTCTCTCTCGCGCA 60.818 63.158 8.75 0.00 0.00 6.09
560 1268 1.226686 CGCACTGCAGCTTTGAGAGT 61.227 55.000 15.27 0.00 0.00 3.24
657 1453 2.202797 CACCGAGCGCTGCACTAT 60.203 61.111 18.48 0.00 0.00 2.12
771 1568 1.357690 CCGCTGCTGTAATGCATGG 59.642 57.895 0.00 0.00 42.48 3.66
772 1569 1.298863 GCCGCTGCTGTAATGCATG 60.299 57.895 0.00 0.00 42.48 4.06
908 1705 1.086634 GCCAACCGTCAGATCTGCTC 61.087 60.000 18.36 11.97 0.00 4.26
923 1721 3.561120 AAATCAGCCGGGTCGCCAA 62.561 57.895 1.27 0.00 0.00 4.52
945 1743 3.644966 AATCAACCGGCTGATTTCCTA 57.355 42.857 24.20 0.00 42.16 2.94
976 1774 1.964552 TCAAACCGGCCGTTTCTTTA 58.035 45.000 26.12 0.00 42.98 1.85
1054 1885 3.197549 TGGCCTGTGCTTCTTTTCTTTTT 59.802 39.130 3.32 0.00 37.74 1.94
1055 1886 2.765699 TGGCCTGTGCTTCTTTTCTTTT 59.234 40.909 3.32 0.00 37.74 2.27
1056 1887 2.101415 GTGGCCTGTGCTTCTTTTCTTT 59.899 45.455 3.32 0.00 37.74 2.52
1057 1888 1.683385 GTGGCCTGTGCTTCTTTTCTT 59.317 47.619 3.32 0.00 37.74 2.52
1058 1889 1.322442 GTGGCCTGTGCTTCTTTTCT 58.678 50.000 3.32 0.00 37.74 2.52
1059 1890 1.032014 TGTGGCCTGTGCTTCTTTTC 58.968 50.000 3.32 0.00 37.74 2.29
1060 1891 0.746659 GTGTGGCCTGTGCTTCTTTT 59.253 50.000 3.32 0.00 37.74 2.27
1061 1892 1.109323 GGTGTGGCCTGTGCTTCTTT 61.109 55.000 3.32 0.00 37.74 2.52
1062 1893 1.529244 GGTGTGGCCTGTGCTTCTT 60.529 57.895 3.32 0.00 37.74 2.52
1063 1894 2.113986 GGTGTGGCCTGTGCTTCT 59.886 61.111 3.32 0.00 37.74 2.85
1064 1895 2.203337 TGGTGTGGCCTGTGCTTC 60.203 61.111 3.32 0.00 38.35 3.86
1065 1896 2.203394 CTGGTGTGGCCTGTGCTT 60.203 61.111 3.32 0.00 38.35 3.91
1066 1897 4.962836 GCTGGTGTGGCCTGTGCT 62.963 66.667 3.32 0.00 38.33 4.40
1068 1899 2.981909 CTGCTGGTGTGGCCTGTG 60.982 66.667 3.32 0.00 38.33 3.66
1069 1900 4.962836 GCTGCTGGTGTGGCCTGT 62.963 66.667 3.32 0.00 38.33 4.00
1075 1906 4.969196 ACGTCGGCTGCTGGTGTG 62.969 66.667 8.89 0.00 0.00 3.82
1076 1907 4.969196 CACGTCGGCTGCTGGTGT 62.969 66.667 8.89 4.70 0.00 4.16
1145 1976 1.996191 GTGAGAGACAAGCACGGAATC 59.004 52.381 0.00 0.00 0.00 2.52
1156 1987 3.541996 TCTGCAAAACTGTGAGAGACA 57.458 42.857 0.00 0.00 0.00 3.41
1239 2070 1.896465 GCTGTACCTGAGGACAAGAGT 59.104 52.381 4.99 0.00 0.00 3.24
1568 2399 2.737252 GTCGTTGGACCATGAGTTCTTC 59.263 50.000 0.00 0.00 37.19 2.87
1757 2600 2.648102 CGCTTAGAGTCGGCGTCG 60.648 66.667 1.15 1.15 43.28 5.12
1761 2604 2.789203 CGTTGCGCTTAGAGTCGGC 61.789 63.158 9.73 0.00 0.00 5.54
1762 2605 1.134530 CTCGTTGCGCTTAGAGTCGG 61.135 60.000 9.73 0.00 0.00 4.79
1763 2606 1.134530 CCTCGTTGCGCTTAGAGTCG 61.135 60.000 9.73 3.17 0.00 4.18
1764 2607 0.109226 ACCTCGTTGCGCTTAGAGTC 60.109 55.000 9.73 0.00 0.00 3.36
1765 2608 0.109226 GACCTCGTTGCGCTTAGAGT 60.109 55.000 9.73 0.00 0.00 3.24
1766 2609 0.802607 GGACCTCGTTGCGCTTAGAG 60.803 60.000 9.73 13.77 0.00 2.43
1767 2610 1.214589 GGACCTCGTTGCGCTTAGA 59.785 57.895 9.73 3.90 0.00 2.10
1768 2611 1.080093 TGGACCTCGTTGCGCTTAG 60.080 57.895 9.73 0.00 0.00 2.18
1894 2737 2.762535 AGCTTTGCCACGTACTACAT 57.237 45.000 0.00 0.00 0.00 2.29
1969 2812 8.113173 AGTAATACAAATTTCTACCCGCAAAA 57.887 30.769 0.00 0.00 0.00 2.44
1971 2814 6.879993 TGAGTAATACAAATTTCTACCCGCAA 59.120 34.615 0.00 0.00 0.00 4.85
1973 2816 6.913873 TGAGTAATACAAATTTCTACCCGC 57.086 37.500 0.00 0.00 0.00 6.13
1974 2817 9.550811 GTTTTGAGTAATACAAATTTCTACCCG 57.449 33.333 0.00 0.00 37.15 5.28
1975 2818 9.850628 GGTTTTGAGTAATACAAATTTCTACCC 57.149 33.333 0.00 0.00 37.15 3.69
1983 2826 8.793592 GGACTTGAGGTTTTGAGTAATACAAAT 58.206 33.333 0.00 0.00 37.15 2.32
1984 2827 7.996644 AGGACTTGAGGTTTTGAGTAATACAAA 59.003 33.333 0.00 0.00 35.81 2.83
1985 2828 7.514721 AGGACTTGAGGTTTTGAGTAATACAA 58.485 34.615 0.00 0.00 0.00 2.41
1986 2829 7.074653 AGGACTTGAGGTTTTGAGTAATACA 57.925 36.000 0.00 0.00 0.00 2.29
1987 2830 7.981102 AAGGACTTGAGGTTTTGAGTAATAC 57.019 36.000 0.00 0.00 0.00 1.89
1988 2831 8.653191 TGTAAGGACTTGAGGTTTTGAGTAATA 58.347 33.333 0.00 0.00 0.00 0.98
1989 2832 7.514721 TGTAAGGACTTGAGGTTTTGAGTAAT 58.485 34.615 0.00 0.00 0.00 1.89
1990 2833 6.891388 TGTAAGGACTTGAGGTTTTGAGTAA 58.109 36.000 0.00 0.00 0.00 2.24
1991 2834 6.488769 TGTAAGGACTTGAGGTTTTGAGTA 57.511 37.500 0.00 0.00 0.00 2.59
1992 2835 5.367945 TGTAAGGACTTGAGGTTTTGAGT 57.632 39.130 0.00 0.00 0.00 3.41
1993 2836 6.072452 GGATTGTAAGGACTTGAGGTTTTGAG 60.072 42.308 0.00 0.00 0.00 3.02
1994 2837 5.768164 GGATTGTAAGGACTTGAGGTTTTGA 59.232 40.000 0.00 0.00 0.00 2.69
1995 2838 5.534654 TGGATTGTAAGGACTTGAGGTTTTG 59.465 40.000 0.00 0.00 0.00 2.44
1996 2839 5.701224 TGGATTGTAAGGACTTGAGGTTTT 58.299 37.500 0.00 0.00 0.00 2.43
1997 2840 5.319043 TGGATTGTAAGGACTTGAGGTTT 57.681 39.130 0.00 0.00 0.00 3.27
1998 2841 4.993705 TGGATTGTAAGGACTTGAGGTT 57.006 40.909 0.00 0.00 0.00 3.50
1999 2842 4.383118 CGATGGATTGTAAGGACTTGAGGT 60.383 45.833 0.00 0.00 0.00 3.85
2000 2843 4.122776 CGATGGATTGTAAGGACTTGAGG 58.877 47.826 0.00 0.00 0.00 3.86
2001 2844 3.557595 GCGATGGATTGTAAGGACTTGAG 59.442 47.826 0.00 0.00 0.00 3.02
2002 2845 3.055458 TGCGATGGATTGTAAGGACTTGA 60.055 43.478 0.00 0.00 0.00 3.02
2003 2846 3.270027 TGCGATGGATTGTAAGGACTTG 58.730 45.455 0.00 0.00 0.00 3.16
2004 2847 3.535561 CTGCGATGGATTGTAAGGACTT 58.464 45.455 0.00 0.00 0.00 3.01
2005 2848 2.743183 GCTGCGATGGATTGTAAGGACT 60.743 50.000 0.00 0.00 0.00 3.85
2006 2849 1.599542 GCTGCGATGGATTGTAAGGAC 59.400 52.381 0.00 0.00 0.00 3.85
2007 2850 1.475034 GGCTGCGATGGATTGTAAGGA 60.475 52.381 0.00 0.00 0.00 3.36
2008 2851 0.947244 GGCTGCGATGGATTGTAAGG 59.053 55.000 0.00 0.00 0.00 2.69
2009 2852 1.667236 TGGCTGCGATGGATTGTAAG 58.333 50.000 0.00 0.00 0.00 2.34
2010 2853 2.121291 TTGGCTGCGATGGATTGTAA 57.879 45.000 0.00 0.00 0.00 2.41
2011 2854 2.121291 TTTGGCTGCGATGGATTGTA 57.879 45.000 0.00 0.00 0.00 2.41
2012 2855 1.477553 ATTTGGCTGCGATGGATTGT 58.522 45.000 0.00 0.00 0.00 2.71
2013 2856 2.159212 TGAATTTGGCTGCGATGGATTG 60.159 45.455 0.00 0.00 0.00 2.67
2014 2857 2.101783 TGAATTTGGCTGCGATGGATT 58.898 42.857 0.00 0.00 0.00 3.01
2015 2858 1.766494 TGAATTTGGCTGCGATGGAT 58.234 45.000 0.00 0.00 0.00 3.41
2016 2859 1.543607 TTGAATTTGGCTGCGATGGA 58.456 45.000 0.00 0.00 0.00 3.41
2017 2860 2.264813 CTTTGAATTTGGCTGCGATGG 58.735 47.619 0.00 0.00 0.00 3.51
2018 2861 1.657094 GCTTTGAATTTGGCTGCGATG 59.343 47.619 0.00 0.00 0.00 3.84
2019 2862 1.273048 TGCTTTGAATTTGGCTGCGAT 59.727 42.857 0.00 0.00 0.00 4.58
2020 2863 0.672889 TGCTTTGAATTTGGCTGCGA 59.327 45.000 0.00 0.00 0.00 5.10
2021 2864 1.657094 GATGCTTTGAATTTGGCTGCG 59.343 47.619 0.00 0.00 0.00 5.18
2022 2865 2.671396 CAGATGCTTTGAATTTGGCTGC 59.329 45.455 0.00 0.00 0.00 5.25
2023 2866 3.056393 TCCAGATGCTTTGAATTTGGCTG 60.056 43.478 0.00 0.00 31.02 4.85
2024 2867 3.167485 TCCAGATGCTTTGAATTTGGCT 58.833 40.909 0.00 0.00 31.02 4.75
2025 2868 3.518590 CTCCAGATGCTTTGAATTTGGC 58.481 45.455 0.00 0.00 31.02 4.52
2026 2869 3.512724 ACCTCCAGATGCTTTGAATTTGG 59.487 43.478 0.00 0.00 31.96 3.28
2027 2870 4.381292 GGACCTCCAGATGCTTTGAATTTG 60.381 45.833 0.00 0.00 35.64 2.32
2028 2871 3.766051 GGACCTCCAGATGCTTTGAATTT 59.234 43.478 0.00 0.00 35.64 1.82
2029 2872 3.359950 GGACCTCCAGATGCTTTGAATT 58.640 45.455 0.00 0.00 35.64 2.17
2030 2873 2.357569 GGGACCTCCAGATGCTTTGAAT 60.358 50.000 0.00 0.00 37.91 2.57
2031 2874 1.004745 GGGACCTCCAGATGCTTTGAA 59.995 52.381 0.00 0.00 37.91 2.69
2032 2875 0.620556 GGGACCTCCAGATGCTTTGA 59.379 55.000 0.00 0.00 37.91 2.69
2033 2876 0.745845 CGGGACCTCCAGATGCTTTG 60.746 60.000 0.00 0.00 37.91 2.77
2034 2877 0.909610 TCGGGACCTCCAGATGCTTT 60.910 55.000 0.00 0.00 35.30 3.51
2035 2878 0.909610 TTCGGGACCTCCAGATGCTT 60.910 55.000 0.00 0.00 39.87 3.91
2036 2879 1.306141 TTCGGGACCTCCAGATGCT 60.306 57.895 0.00 0.00 39.87 3.79
2037 2880 1.153349 GTTCGGGACCTCCAGATGC 60.153 63.158 0.00 0.00 39.87 3.91
2038 2881 1.522569 GGTTCGGGACCTCCAGATG 59.477 63.158 0.00 0.00 45.55 2.90
2039 2882 4.051932 GGTTCGGGACCTCCAGAT 57.948 61.111 0.00 0.00 45.55 2.90
2047 2890 1.228154 ACTTGGCTTGGTTCGGGAC 60.228 57.895 0.00 0.00 0.00 4.46
2048 2891 1.072505 GACTTGGCTTGGTTCGGGA 59.927 57.895 0.00 0.00 0.00 5.14
2049 2892 0.609131 ATGACTTGGCTTGGTTCGGG 60.609 55.000 0.00 0.00 0.00 5.14
2050 2893 0.523072 CATGACTTGGCTTGGTTCGG 59.477 55.000 0.00 0.00 0.00 4.30
2051 2894 0.523072 CCATGACTTGGCTTGGTTCG 59.477 55.000 0.00 0.00 39.09 3.95
2061 2904 2.893637 CGAGGGTAGAACCATGACTTG 58.106 52.381 0.00 0.00 41.02 3.16
2062 2905 1.207329 GCGAGGGTAGAACCATGACTT 59.793 52.381 0.00 0.00 41.02 3.01
2063 2906 0.824759 GCGAGGGTAGAACCATGACT 59.175 55.000 0.00 0.00 41.02 3.41
2064 2907 0.824759 AGCGAGGGTAGAACCATGAC 59.175 55.000 0.00 0.00 41.02 3.06
2065 2908 2.029623 GTAGCGAGGGTAGAACCATGA 58.970 52.381 0.00 0.00 41.02 3.07
2066 2909 1.269102 CGTAGCGAGGGTAGAACCATG 60.269 57.143 0.00 0.00 41.02 3.66
2067 2910 1.030457 CGTAGCGAGGGTAGAACCAT 58.970 55.000 0.00 0.00 41.02 3.55
2068 2911 0.035152 TCGTAGCGAGGGTAGAACCA 60.035 55.000 0.00 0.00 41.02 3.67
2069 2912 2.785868 TCGTAGCGAGGGTAGAACC 58.214 57.895 0.00 0.00 37.60 3.62
2136 2979 9.959749 GTCCTTTTGTGATTTTTGTATTACTCA 57.040 29.630 0.00 0.00 0.00 3.41
2137 2980 9.959749 TGTCCTTTTGTGATTTTTGTATTACTC 57.040 29.630 0.00 0.00 0.00 2.59
2142 2985 9.883142 TCTTTTGTCCTTTTGTGATTTTTGTAT 57.117 25.926 0.00 0.00 0.00 2.29
2143 2986 9.883142 ATCTTTTGTCCTTTTGTGATTTTTGTA 57.117 25.926 0.00 0.00 0.00 2.41
2144 2987 8.791327 ATCTTTTGTCCTTTTGTGATTTTTGT 57.209 26.923 0.00 0.00 0.00 2.83
2154 2997 9.727627 GCAGATTAGATATCTTTTGTCCTTTTG 57.272 33.333 11.25 1.16 0.00 2.44
2155 2998 9.692325 AGCAGATTAGATATCTTTTGTCCTTTT 57.308 29.630 11.25 0.00 0.00 2.27
2156 2999 9.692325 AAGCAGATTAGATATCTTTTGTCCTTT 57.308 29.630 11.25 0.00 0.00 3.11
2157 3000 9.118300 CAAGCAGATTAGATATCTTTTGTCCTT 57.882 33.333 11.25 5.24 0.00 3.36
2158 3001 8.489489 TCAAGCAGATTAGATATCTTTTGTCCT 58.511 33.333 11.25 0.00 0.00 3.85
2159 3002 8.668510 TCAAGCAGATTAGATATCTTTTGTCC 57.331 34.615 11.25 0.00 0.00 4.02
2161 3004 9.064706 CCATCAAGCAGATTAGATATCTTTTGT 57.935 33.333 11.25 0.00 33.72 2.83
2162 3005 9.281371 TCCATCAAGCAGATTAGATATCTTTTG 57.719 33.333 11.25 5.92 33.72 2.44
2163 3006 9.282569 GTCCATCAAGCAGATTAGATATCTTTT 57.717 33.333 11.25 0.00 33.72 2.27
2164 3007 7.601886 CGTCCATCAAGCAGATTAGATATCTTT 59.398 37.037 11.25 0.00 33.72 2.52
2165 3008 7.039434 TCGTCCATCAAGCAGATTAGATATCTT 60.039 37.037 11.25 0.00 33.72 2.40
2166 3009 6.435591 TCGTCCATCAAGCAGATTAGATATCT 59.564 38.462 10.73 10.73 33.72 1.98
2167 3010 6.625362 TCGTCCATCAAGCAGATTAGATATC 58.375 40.000 0.00 0.00 33.72 1.63
2168 3011 6.596309 TCGTCCATCAAGCAGATTAGATAT 57.404 37.500 0.00 0.00 33.72 1.63
2169 3012 5.565637 GCTCGTCCATCAAGCAGATTAGATA 60.566 44.000 0.00 0.00 33.72 1.98
2170 3013 4.798924 GCTCGTCCATCAAGCAGATTAGAT 60.799 45.833 0.00 0.00 33.72 1.98
2171 3014 3.491619 GCTCGTCCATCAAGCAGATTAGA 60.492 47.826 0.00 0.00 33.72 2.10
2172 3015 2.799412 GCTCGTCCATCAAGCAGATTAG 59.201 50.000 0.00 0.00 33.72 1.73
2173 3016 2.168313 TGCTCGTCCATCAAGCAGATTA 59.832 45.455 0.00 0.00 40.91 1.75
2174 3017 1.065926 TGCTCGTCCATCAAGCAGATT 60.066 47.619 0.00 0.00 40.91 2.40
2175 3018 0.538584 TGCTCGTCCATCAAGCAGAT 59.461 50.000 0.00 0.00 40.91 2.90
2176 3019 0.321346 TTGCTCGTCCATCAAGCAGA 59.679 50.000 0.00 0.00 45.92 4.26
2177 3020 1.135859 GTTTGCTCGTCCATCAAGCAG 60.136 52.381 0.00 0.00 45.92 4.24
2178 3021 0.874390 GTTTGCTCGTCCATCAAGCA 59.126 50.000 0.00 0.00 43.89 3.91
2179 3022 0.169009 GGTTTGCTCGTCCATCAAGC 59.831 55.000 0.00 0.00 36.56 4.01
2180 3023 0.443869 CGGTTTGCTCGTCCATCAAG 59.556 55.000 0.00 0.00 0.00 3.02
2181 3024 0.034198 TCGGTTTGCTCGTCCATCAA 59.966 50.000 0.00 0.00 0.00 2.57
2182 3025 0.249120 ATCGGTTTGCTCGTCCATCA 59.751 50.000 0.00 0.00 0.00 3.07
2183 3026 0.931005 GATCGGTTTGCTCGTCCATC 59.069 55.000 0.00 0.00 0.00 3.51
2184 3027 0.537188 AGATCGGTTTGCTCGTCCAT 59.463 50.000 0.00 0.00 0.00 3.41
2185 3028 0.389817 CAGATCGGTTTGCTCGTCCA 60.390 55.000 0.00 0.00 0.00 4.02
2186 3029 0.389948 ACAGATCGGTTTGCTCGTCC 60.390 55.000 0.00 0.00 0.00 4.79
2187 3030 0.992802 GACAGATCGGTTTGCTCGTC 59.007 55.000 0.00 0.00 0.00 4.20
2188 3031 0.317160 TGACAGATCGGTTTGCTCGT 59.683 50.000 0.00 0.00 0.00 4.18
2189 3032 1.126846 GTTGACAGATCGGTTTGCTCG 59.873 52.381 0.00 0.00 0.00 5.03
2190 3033 2.143122 TGTTGACAGATCGGTTTGCTC 58.857 47.619 0.00 0.00 0.00 4.26
2191 3034 2.254546 TGTTGACAGATCGGTTTGCT 57.745 45.000 0.00 0.00 0.00 3.91
2192 3035 2.744202 AGATGTTGACAGATCGGTTTGC 59.256 45.455 0.00 0.00 0.00 3.68
2193 3036 3.996363 TCAGATGTTGACAGATCGGTTTG 59.004 43.478 0.00 0.00 0.00 2.93
2194 3037 4.271696 TCAGATGTTGACAGATCGGTTT 57.728 40.909 0.00 0.00 0.00 3.27
2195 3038 3.961480 TCAGATGTTGACAGATCGGTT 57.039 42.857 0.00 0.00 0.00 4.44
2196 3039 3.854666 CTTCAGATGTTGACAGATCGGT 58.145 45.455 0.00 0.00 34.94 4.69
2197 3040 2.606725 GCTTCAGATGTTGACAGATCGG 59.393 50.000 0.00 0.00 34.94 4.18
2198 3041 3.519579 AGCTTCAGATGTTGACAGATCG 58.480 45.455 0.00 0.00 34.94 3.69
2199 3042 4.934001 TCAAGCTTCAGATGTTGACAGATC 59.066 41.667 0.00 0.00 34.94 2.75
2200 3043 4.903054 TCAAGCTTCAGATGTTGACAGAT 58.097 39.130 0.00 0.00 34.94 2.90
2201 3044 4.341366 TCAAGCTTCAGATGTTGACAGA 57.659 40.909 0.00 0.00 34.94 3.41
2202 3045 5.180680 TGATTCAAGCTTCAGATGTTGACAG 59.819 40.000 0.00 0.00 34.94 3.51
2203 3046 5.065235 TGATTCAAGCTTCAGATGTTGACA 58.935 37.500 0.00 0.00 34.94 3.58
2204 3047 5.618056 TGATTCAAGCTTCAGATGTTGAC 57.382 39.130 0.00 0.00 34.94 3.18
2205 3048 6.829229 ATTGATTCAAGCTTCAGATGTTGA 57.171 33.333 5.21 0.00 0.00 3.18
2206 3049 7.884816 AAATTGATTCAAGCTTCAGATGTTG 57.115 32.000 5.21 0.00 0.00 3.33
2207 3050 9.415544 GTAAAATTGATTCAAGCTTCAGATGTT 57.584 29.630 5.21 0.00 0.00 2.71
2208 3051 8.800332 AGTAAAATTGATTCAAGCTTCAGATGT 58.200 29.630 5.21 0.00 0.00 3.06
2209 3052 9.073368 CAGTAAAATTGATTCAAGCTTCAGATG 57.927 33.333 5.21 0.00 0.00 2.90
2210 3053 7.758528 GCAGTAAAATTGATTCAAGCTTCAGAT 59.241 33.333 5.21 0.00 0.00 2.90
2211 3054 7.086376 GCAGTAAAATTGATTCAAGCTTCAGA 58.914 34.615 5.21 0.00 0.00 3.27
2212 3055 6.309737 GGCAGTAAAATTGATTCAAGCTTCAG 59.690 38.462 5.21 0.00 0.00 3.02
2213 3056 6.158598 GGCAGTAAAATTGATTCAAGCTTCA 58.841 36.000 5.21 0.00 0.00 3.02
2214 3057 6.158598 TGGCAGTAAAATTGATTCAAGCTTC 58.841 36.000 5.21 0.00 0.00 3.86
2215 3058 6.100404 TGGCAGTAAAATTGATTCAAGCTT 57.900 33.333 5.21 0.00 0.00 3.74
2216 3059 5.726980 TGGCAGTAAAATTGATTCAAGCT 57.273 34.783 5.21 0.00 0.00 3.74
2217 3060 6.973229 AATGGCAGTAAAATTGATTCAAGC 57.027 33.333 5.21 1.12 0.00 4.01
2218 3061 9.512435 CTCTAATGGCAGTAAAATTGATTCAAG 57.488 33.333 5.21 0.00 0.00 3.02
2219 3062 9.241919 TCTCTAATGGCAGTAAAATTGATTCAA 57.758 29.630 0.75 0.75 0.00 2.69
2220 3063 8.806429 TCTCTAATGGCAGTAAAATTGATTCA 57.194 30.769 0.00 0.00 0.00 2.57
2221 3064 8.897752 ACTCTCTAATGGCAGTAAAATTGATTC 58.102 33.333 0.00 0.00 0.00 2.52
2222 3065 8.814038 ACTCTCTAATGGCAGTAAAATTGATT 57.186 30.769 0.00 0.00 0.00 2.57
2223 3066 7.500559 GGACTCTCTAATGGCAGTAAAATTGAT 59.499 37.037 0.00 0.00 0.00 2.57
2224 3067 6.823689 GGACTCTCTAATGGCAGTAAAATTGA 59.176 38.462 0.00 0.00 0.00 2.57
2225 3068 6.599244 TGGACTCTCTAATGGCAGTAAAATTG 59.401 38.462 0.00 0.00 0.00 2.32
2226 3069 6.721318 TGGACTCTCTAATGGCAGTAAAATT 58.279 36.000 0.00 0.00 0.00 1.82
2227 3070 6.313519 TGGACTCTCTAATGGCAGTAAAAT 57.686 37.500 0.00 0.00 0.00 1.82
2228 3071 5.755409 TGGACTCTCTAATGGCAGTAAAA 57.245 39.130 0.00 0.00 0.00 1.52
2229 3072 5.663106 AGATGGACTCTCTAATGGCAGTAAA 59.337 40.000 0.00 0.00 0.00 2.01
2230 3073 5.211973 AGATGGACTCTCTAATGGCAGTAA 58.788 41.667 0.00 0.00 0.00 2.24
2231 3074 4.809193 AGATGGACTCTCTAATGGCAGTA 58.191 43.478 0.00 0.00 0.00 2.74
2232 3075 3.640967 GAGATGGACTCTCTAATGGCAGT 59.359 47.826 0.00 0.00 45.97 4.40
2233 3076 4.255833 GAGATGGACTCTCTAATGGCAG 57.744 50.000 0.00 0.00 45.97 4.85
2242 3085 3.306641 AGTGCAAGTTGAGATGGACTCTC 60.307 47.826 7.16 0.00 43.59 3.20
2243 3086 2.636893 AGTGCAAGTTGAGATGGACTCT 59.363 45.455 7.16 0.00 43.59 3.24
2244 3087 3.051081 AGTGCAAGTTGAGATGGACTC 57.949 47.619 7.16 0.00 43.59 3.36
2246 3089 2.675348 GCTAGTGCAAGTTGAGATGGAC 59.325 50.000 7.16 0.00 38.06 4.02
2247 3090 2.977914 GCTAGTGCAAGTTGAGATGGA 58.022 47.619 7.16 0.00 39.41 3.41
2263 3106 8.118773 TTCTATCCAGAGAAGCGACTTGCTAG 62.119 46.154 0.00 0.00 42.47 3.42
2264 3107 6.382441 TTCTATCCAGAGAAGCGACTTGCTA 61.382 44.000 0.00 0.00 42.47 3.49
2265 3108 5.650834 TTCTATCCAGAGAAGCGACTTGCT 61.651 45.833 0.00 0.00 44.21 3.91
2266 3109 2.099921 TCTATCCAGAGAAGCGACTTGC 59.900 50.000 0.00 0.00 46.98 4.01
2267 3110 4.377839 TTCTATCCAGAGAAGCGACTTG 57.622 45.455 0.00 0.00 31.72 3.16
2268 3111 5.407407 TTTTCTATCCAGAGAAGCGACTT 57.593 39.130 0.00 0.00 36.80 3.01
2269 3112 4.142049 CCTTTTCTATCCAGAGAAGCGACT 60.142 45.833 0.00 0.00 40.20 4.18
2270 3113 4.116238 CCTTTTCTATCCAGAGAAGCGAC 58.884 47.826 0.00 0.00 40.20 5.19
2271 3114 4.023980 TCCTTTTCTATCCAGAGAAGCGA 58.976 43.478 0.00 0.00 40.20 4.93
2272 3115 4.392921 TCCTTTTCTATCCAGAGAAGCG 57.607 45.455 0.62 0.00 40.20 4.68
2273 3116 7.151976 GTCTATCCTTTTCTATCCAGAGAAGC 58.848 42.308 0.62 0.00 40.20 3.86
2274 3117 7.508977 AGGTCTATCCTTTTCTATCCAGAGAAG 59.491 40.741 0.00 0.00 45.67 2.85
2275 3118 7.366226 AGGTCTATCCTTTTCTATCCAGAGAA 58.634 38.462 0.00 0.00 45.67 2.87
2276 3119 6.928202 AGGTCTATCCTTTTCTATCCAGAGA 58.072 40.000 0.00 0.00 45.67 3.10
2291 3134 4.363991 AGAATGCATGGAAGGTCTATCC 57.636 45.455 0.00 0.00 37.48 2.59
2292 3135 5.009410 CCAAAGAATGCATGGAAGGTCTATC 59.991 44.000 0.00 0.00 36.27 2.08
2293 3136 4.891756 CCAAAGAATGCATGGAAGGTCTAT 59.108 41.667 0.00 0.00 36.27 1.98
2294 3137 4.263905 ACCAAAGAATGCATGGAAGGTCTA 60.264 41.667 10.25 0.00 37.66 2.59
2295 3138 3.094572 CCAAAGAATGCATGGAAGGTCT 58.905 45.455 0.00 0.00 36.27 3.85
2296 3139 2.827921 ACCAAAGAATGCATGGAAGGTC 59.172 45.455 10.25 0.00 37.66 3.85
2297 3140 2.564062 CACCAAAGAATGCATGGAAGGT 59.436 45.455 10.25 7.64 37.66 3.50
2298 3141 2.564062 ACACCAAAGAATGCATGGAAGG 59.436 45.455 10.25 7.04 37.66 3.46
2299 3142 3.947910 ACACCAAAGAATGCATGGAAG 57.052 42.857 10.25 4.93 37.66 3.46
2300 3143 4.220382 CCTTACACCAAAGAATGCATGGAA 59.780 41.667 10.25 0.00 37.66 3.53
2301 3144 3.763360 CCTTACACCAAAGAATGCATGGA 59.237 43.478 10.25 0.00 37.66 3.41
2302 3145 3.763360 TCCTTACACCAAAGAATGCATGG 59.237 43.478 0.00 0.00 40.16 3.66
2303 3146 5.105635 ACATCCTTACACCAAAGAATGCATG 60.106 40.000 0.00 0.00 0.00 4.06
2304 3147 5.018809 ACATCCTTACACCAAAGAATGCAT 58.981 37.500 0.00 0.00 0.00 3.96
2305 3148 4.406456 ACATCCTTACACCAAAGAATGCA 58.594 39.130 0.00 0.00 0.00 3.96
2306 3149 5.391312 AACATCCTTACACCAAAGAATGC 57.609 39.130 0.00 0.00 0.00 3.56
2307 3150 9.927668 AAATAAACATCCTTACACCAAAGAATG 57.072 29.630 0.00 0.00 0.00 2.67
2308 3151 9.927668 CAAATAAACATCCTTACACCAAAGAAT 57.072 29.630 0.00 0.00 0.00 2.40
2309 3152 8.919145 ACAAATAAACATCCTTACACCAAAGAA 58.081 29.630 0.00 0.00 0.00 2.52
2310 3153 8.472007 ACAAATAAACATCCTTACACCAAAGA 57.528 30.769 0.00 0.00 0.00 2.52
2311 3154 9.541143 AAACAAATAAACATCCTTACACCAAAG 57.459 29.630 0.00 0.00 0.00 2.77
2312 3155 9.892130 AAAACAAATAAACATCCTTACACCAAA 57.108 25.926 0.00 0.00 0.00 3.28
2313 3156 9.535878 GAAAACAAATAAACATCCTTACACCAA 57.464 29.630 0.00 0.00 0.00 3.67
2314 3157 8.919145 AGAAAACAAATAAACATCCTTACACCA 58.081 29.630 0.00 0.00 0.00 4.17
2351 3194 3.325293 AATGAAGCGCTCTTCTCTCAA 57.675 42.857 12.06 0.00 46.81 3.02
2532 4053 3.566332 CCCCATTTCCTTTCCATCTTGGA 60.566 47.826 0.00 0.00 46.61 3.53
2533 4054 2.767960 CCCCATTTCCTTTCCATCTTGG 59.232 50.000 0.00 0.00 39.43 3.61
2534 4055 3.444029 ACCCCATTTCCTTTCCATCTTG 58.556 45.455 0.00 0.00 0.00 3.02
2535 4056 3.713003 GACCCCATTTCCTTTCCATCTT 58.287 45.455 0.00 0.00 0.00 2.40
2536 4057 2.357154 CGACCCCATTTCCTTTCCATCT 60.357 50.000 0.00 0.00 0.00 2.90
2537 4058 2.024414 CGACCCCATTTCCTTTCCATC 58.976 52.381 0.00 0.00 0.00 3.51
2538 4059 1.638589 TCGACCCCATTTCCTTTCCAT 59.361 47.619 0.00 0.00 0.00 3.41
2539 4060 1.068948 TCGACCCCATTTCCTTTCCA 58.931 50.000 0.00 0.00 0.00 3.53
2540 4061 2.209690 TTCGACCCCATTTCCTTTCC 57.790 50.000 0.00 0.00 0.00 3.13
2541 4062 2.427095 CCATTCGACCCCATTTCCTTTC 59.573 50.000 0.00 0.00 0.00 2.62
2542 4063 2.042433 TCCATTCGACCCCATTTCCTTT 59.958 45.455 0.00 0.00 0.00 3.11
2543 4064 1.638589 TCCATTCGACCCCATTTCCTT 59.361 47.619 0.00 0.00 0.00 3.36
2544 4065 1.295020 TCCATTCGACCCCATTTCCT 58.705 50.000 0.00 0.00 0.00 3.36
2545 4066 2.137810 TTCCATTCGACCCCATTTCC 57.862 50.000 0.00 0.00 0.00 3.13
2546 4067 3.699038 TCAATTCCATTCGACCCCATTTC 59.301 43.478 0.00 0.00 0.00 2.17
2547 4068 3.707316 TCAATTCCATTCGACCCCATTT 58.293 40.909 0.00 0.00 0.00 2.32
2548 4069 3.380471 TCAATTCCATTCGACCCCATT 57.620 42.857 0.00 0.00 0.00 3.16
2549 4070 3.380471 TTCAATTCCATTCGACCCCAT 57.620 42.857 0.00 0.00 0.00 4.00
2550 4071 2.889170 TTCAATTCCATTCGACCCCA 57.111 45.000 0.00 0.00 0.00 4.96
2551 4072 3.181476 CCAATTCAATTCCATTCGACCCC 60.181 47.826 0.00 0.00 0.00 4.95
2552 4073 3.699038 TCCAATTCAATTCCATTCGACCC 59.301 43.478 0.00 0.00 0.00 4.46
2553 4074 4.399303 AGTCCAATTCAATTCCATTCGACC 59.601 41.667 0.00 0.00 0.00 4.79
2554 4075 5.123820 TCAGTCCAATTCAATTCCATTCGAC 59.876 40.000 0.00 0.00 0.00 4.20
2555 4076 5.252547 TCAGTCCAATTCAATTCCATTCGA 58.747 37.500 0.00 0.00 0.00 3.71
2556 4077 5.565592 TCAGTCCAATTCAATTCCATTCG 57.434 39.130 0.00 0.00 0.00 3.34
2557 4078 8.782339 ATTTTCAGTCCAATTCAATTCCATTC 57.218 30.769 0.00 0.00 0.00 2.67
2558 4079 9.223099 GAATTTTCAGTCCAATTCAATTCCATT 57.777 29.630 0.00 0.00 38.67 3.16
2559 4080 7.825761 GGAATTTTCAGTCCAATTCAATTCCAT 59.174 33.333 13.47 0.00 43.96 3.41
2560 4081 7.160726 GGAATTTTCAGTCCAATTCAATTCCA 58.839 34.615 13.47 0.00 43.96 3.53
2561 4082 7.160726 TGGAATTTTCAGTCCAATTCAATTCC 58.839 34.615 12.03 12.03 44.34 3.01
2571 4092 5.837979 TCTTGGATTTGGAATTTTCAGTCCA 59.162 36.000 8.90 8.90 45.65 4.02
2572 4093 6.345096 TCTTGGATTTGGAATTTTCAGTCC 57.655 37.500 4.88 4.88 37.70 3.85
2573 4094 6.815142 CCATCTTGGATTTGGAATTTTCAGTC 59.185 38.462 0.00 0.00 40.96 3.51
2574 4095 6.497954 TCCATCTTGGATTTGGAATTTTCAGT 59.502 34.615 0.00 0.00 42.67 3.41
2575 4096 6.938507 TCCATCTTGGATTTGGAATTTTCAG 58.061 36.000 0.00 0.00 42.67 3.02
2576 4097 6.931790 TCCATCTTGGATTTGGAATTTTCA 57.068 33.333 0.00 0.00 42.67 2.69
2616 4137 4.027540 GCTAAGCTCAATTCTACGTCGAAC 60.028 45.833 4.45 0.00 0.00 3.95
2644 4165 4.072131 TCTAGAAAATTGTGAGCACCCAC 58.928 43.478 0.00 0.00 37.55 4.61
2665 4186 9.983804 CCGAACACTAAAAACCTAAAATAGATC 57.016 33.333 0.00 0.00 0.00 2.75
2674 4195 4.436113 AACCCCGAACACTAAAAACCTA 57.564 40.909 0.00 0.00 0.00 3.08
2683 4204 0.399075 CCCAACTAACCCCGAACACT 59.601 55.000 0.00 0.00 0.00 3.55
2685 4206 1.762471 CCCCAACTAACCCCGAACA 59.238 57.895 0.00 0.00 0.00 3.18
2703 4224 1.389609 TAGTCGACGGGAATGCCTCC 61.390 60.000 10.46 0.00 44.54 4.30
2708 4229 2.602456 CGTCTCATAGTCGACGGGAATG 60.602 54.545 10.46 12.43 46.61 2.67
2709 4230 1.602851 CGTCTCATAGTCGACGGGAAT 59.397 52.381 10.46 0.00 46.61 3.01
2715 4236 0.733729 ACAGGCGTCTCATAGTCGAC 59.266 55.000 7.70 7.70 35.02 4.20
2723 4244 3.067106 GAGAAAAATCACAGGCGTCTCA 58.933 45.455 0.00 0.00 32.20 3.27
2730 4251 6.985188 TCCTTTATCGAGAAAAATCACAGG 57.015 37.500 6.68 2.58 0.00 4.00
2740 4261 9.456147 TGAATAAAAACCATCCTTTATCGAGAA 57.544 29.630 0.00 0.00 29.50 2.87
2741 4262 8.889717 GTGAATAAAAACCATCCTTTATCGAGA 58.110 33.333 0.00 0.00 29.50 4.04
2742 4263 8.893727 AGTGAATAAAAACCATCCTTTATCGAG 58.106 33.333 0.00 0.00 29.50 4.04
2743 4264 8.801882 AGTGAATAAAAACCATCCTTTATCGA 57.198 30.769 0.00 0.00 29.50 3.59
2744 4265 8.673711 TGAGTGAATAAAAACCATCCTTTATCG 58.326 33.333 0.00 0.00 29.50 2.92
2748 4269 9.492973 CATTTGAGTGAATAAAAACCATCCTTT 57.507 29.630 0.00 0.00 0.00 3.11
2749 4270 8.096414 CCATTTGAGTGAATAAAAACCATCCTT 58.904 33.333 0.00 0.00 0.00 3.36
2750 4271 7.454380 TCCATTTGAGTGAATAAAAACCATCCT 59.546 33.333 0.00 0.00 0.00 3.24
2751 4272 7.610865 TCCATTTGAGTGAATAAAAACCATCC 58.389 34.615 0.00 0.00 0.00 3.51
2752 4273 7.276438 GCTCCATTTGAGTGAATAAAAACCATC 59.724 37.037 0.00 0.00 43.48 3.51
2753 4274 7.099120 GCTCCATTTGAGTGAATAAAAACCAT 58.901 34.615 0.00 0.00 43.48 3.55
2754 4275 6.041409 TGCTCCATTTGAGTGAATAAAAACCA 59.959 34.615 0.00 0.00 43.48 3.67
2755 4276 6.454795 TGCTCCATTTGAGTGAATAAAAACC 58.545 36.000 0.00 0.00 43.48 3.27
2756 4277 7.814107 TGATGCTCCATTTGAGTGAATAAAAAC 59.186 33.333 0.00 0.00 43.48 2.43
2757 4278 7.894708 TGATGCTCCATTTGAGTGAATAAAAA 58.105 30.769 0.00 0.00 43.48 1.94
2758 4279 7.465353 TGATGCTCCATTTGAGTGAATAAAA 57.535 32.000 0.00 0.00 43.48 1.52
2759 4280 7.394077 TCTTGATGCTCCATTTGAGTGAATAAA 59.606 33.333 0.00 0.00 43.48 1.40
2760 4281 6.885918 TCTTGATGCTCCATTTGAGTGAATAA 59.114 34.615 0.00 0.00 43.48 1.40
2761 4282 6.417258 TCTTGATGCTCCATTTGAGTGAATA 58.583 36.000 0.00 0.00 43.48 1.75
2762 4283 5.258841 TCTTGATGCTCCATTTGAGTGAAT 58.741 37.500 0.00 0.00 43.48 2.57
2763 4284 4.654915 TCTTGATGCTCCATTTGAGTGAA 58.345 39.130 0.00 0.00 43.48 3.18
2764 4285 4.290711 TCTTGATGCTCCATTTGAGTGA 57.709 40.909 0.00 0.00 43.48 3.41
2765 4286 4.698780 TCTTCTTGATGCTCCATTTGAGTG 59.301 41.667 0.00 0.00 43.48 3.51
2766 4287 4.914983 TCTTCTTGATGCTCCATTTGAGT 58.085 39.130 0.00 0.00 43.48 3.41
2767 4288 6.541278 TGTATCTTCTTGATGCTCCATTTGAG 59.459 38.462 0.00 0.00 38.39 3.02
2768 4289 6.417258 TGTATCTTCTTGATGCTCCATTTGA 58.583 36.000 0.00 0.00 38.39 2.69
2769 4290 6.688637 TGTATCTTCTTGATGCTCCATTTG 57.311 37.500 0.00 0.00 38.39 2.32
2770 4291 7.177216 TGTTTGTATCTTCTTGATGCTCCATTT 59.823 33.333 0.00 0.00 38.39 2.32
2771 4292 6.660521 TGTTTGTATCTTCTTGATGCTCCATT 59.339 34.615 0.00 0.00 38.39 3.16
2772 4293 6.094603 GTGTTTGTATCTTCTTGATGCTCCAT 59.905 38.462 0.00 0.00 38.39 3.41
2773 4294 5.412594 GTGTTTGTATCTTCTTGATGCTCCA 59.587 40.000 0.00 0.00 38.39 3.86
2774 4295 5.412594 TGTGTTTGTATCTTCTTGATGCTCC 59.587 40.000 0.00 0.00 38.39 4.70
2775 4296 6.486253 TGTGTTTGTATCTTCTTGATGCTC 57.514 37.500 0.00 0.00 38.39 4.26
2776 4297 6.882610 TTGTGTTTGTATCTTCTTGATGCT 57.117 33.333 0.00 0.00 38.39 3.79
2777 4298 7.307694 TCATTGTGTTTGTATCTTCTTGATGC 58.692 34.615 0.00 0.00 38.12 3.91
2778 4299 7.484007 GCTCATTGTGTTTGTATCTTCTTGATG 59.516 37.037 0.00 0.00 36.65 3.07
2779 4300 7.175467 TGCTCATTGTGTTTGTATCTTCTTGAT 59.825 33.333 0.00 0.00 39.11 2.57
2780 4301 6.486320 TGCTCATTGTGTTTGTATCTTCTTGA 59.514 34.615 0.00 0.00 0.00 3.02
2781 4302 6.580041 GTGCTCATTGTGTTTGTATCTTCTTG 59.420 38.462 0.00 0.00 0.00 3.02
2782 4303 6.262944 TGTGCTCATTGTGTTTGTATCTTCTT 59.737 34.615 0.00 0.00 0.00 2.52
2783 4304 5.764686 TGTGCTCATTGTGTTTGTATCTTCT 59.235 36.000 0.00 0.00 0.00 2.85
2784 4305 5.853282 GTGTGCTCATTGTGTTTGTATCTTC 59.147 40.000 0.00 0.00 0.00 2.87
2785 4306 5.299028 TGTGTGCTCATTGTGTTTGTATCTT 59.701 36.000 0.00 0.00 0.00 2.40
2786 4307 4.821260 TGTGTGCTCATTGTGTTTGTATCT 59.179 37.500 0.00 0.00 0.00 1.98
2787 4308 4.911610 GTGTGTGCTCATTGTGTTTGTATC 59.088 41.667 0.00 0.00 0.00 2.24
2788 4309 4.261572 GGTGTGTGCTCATTGTGTTTGTAT 60.262 41.667 0.00 0.00 0.00 2.29
2789 4310 3.066064 GGTGTGTGCTCATTGTGTTTGTA 59.934 43.478 0.00 0.00 0.00 2.41
2790 4311 2.159254 GGTGTGTGCTCATTGTGTTTGT 60.159 45.455 0.00 0.00 0.00 2.83
2791 4312 2.462889 GGTGTGTGCTCATTGTGTTTG 58.537 47.619 0.00 0.00 0.00 2.93
2792 4313 1.408702 GGGTGTGTGCTCATTGTGTTT 59.591 47.619 0.00 0.00 0.00 2.83
2793 4314 1.032014 GGGTGTGTGCTCATTGTGTT 58.968 50.000 0.00 0.00 0.00 3.32
2794 4315 1.165907 CGGGTGTGTGCTCATTGTGT 61.166 55.000 0.00 0.00 0.00 3.72
2795 4316 1.575922 CGGGTGTGTGCTCATTGTG 59.424 57.895 0.00 0.00 0.00 3.33
2796 4317 1.600636 CCGGGTGTGTGCTCATTGT 60.601 57.895 0.00 0.00 0.00 2.71
2797 4318 2.981560 GCCGGGTGTGTGCTCATTG 61.982 63.158 2.18 0.00 0.00 2.82
2798 4319 2.672996 GCCGGGTGTGTGCTCATT 60.673 61.111 2.18 0.00 0.00 2.57
2799 4320 4.722700 GGCCGGGTGTGTGCTCAT 62.723 66.667 2.18 0.00 0.00 2.90
2803 4324 3.702048 TAGAGGCCGGGTGTGTGC 61.702 66.667 2.18 0.00 0.00 4.57
2804 4325 1.899437 ATGTAGAGGCCGGGTGTGTG 61.899 60.000 2.18 0.00 0.00 3.82
2805 4326 0.324923 TATGTAGAGGCCGGGTGTGT 60.325 55.000 2.18 0.00 0.00 3.72
2806 4327 0.389391 CTATGTAGAGGCCGGGTGTG 59.611 60.000 2.18 0.00 0.00 3.82
2807 4328 0.032416 ACTATGTAGAGGCCGGGTGT 60.032 55.000 2.18 0.00 0.00 4.16
2808 4329 2.822215 ACTATGTAGAGGCCGGGTG 58.178 57.895 2.18 0.00 0.00 4.61


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.