Multiple sequence alignment - TraesCS4D01G177800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G177800 chr4D 100.000 6036 0 0 1 6036 309507269 309501234 0.000000e+00 11147.0
1 TraesCS4D01G177800 chr4B 95.262 2174 86 10 2912 5072 386209992 386207823 0.000000e+00 3428.0
2 TraesCS4D01G177800 chr4B 93.080 2341 108 18 587 2885 386212407 386210079 0.000000e+00 3376.0
3 TraesCS4D01G177800 chr4B 91.520 967 35 13 5076 6036 386205153 386204228 0.000000e+00 1288.0
4 TraesCS4D01G177800 chr4B 94.611 167 9 0 2573 2739 206802590 206802756 6.000000e-65 259.0
5 TraesCS4D01G177800 chr4B 82.593 270 34 8 1208 1471 375660201 375659939 6.090000e-55 226.0
6 TraesCS4D01G177800 chr4A 92.575 1643 71 26 4425 6036 165754469 165756091 0.000000e+00 2311.0
7 TraesCS4D01G177800 chr4A 87.431 1440 108 24 1474 2847 165750344 165751776 0.000000e+00 1589.0
8 TraesCS4D01G177800 chr4A 93.994 616 25 6 594 1200 165749730 165750342 0.000000e+00 922.0
9 TraesCS4D01G177800 chr4A 90.977 266 19 4 4134 4397 165754144 165754406 2.680000e-93 353.0
10 TraesCS4D01G177800 chr4A 86.306 314 34 5 3817 4122 165753757 165754069 3.490000e-87 333.0
11 TraesCS4D01G177800 chr4A 95.181 166 8 0 2577 2742 584667599 584667434 4.640000e-66 263.0
12 TraesCS4D01G177800 chr4A 86.667 60 8 0 32 91 606519687 606519746 3.900000e-07 67.6
13 TraesCS4D01G177800 chr2B 76.782 547 101 16 3400 3938 216851476 216852004 3.560000e-72 283.0
14 TraesCS4D01G177800 chr2B 94.767 172 8 1 2577 2748 316008195 316008025 3.590000e-67 267.0
15 TraesCS4D01G177800 chr1B 76.799 556 90 29 3443 3971 325807730 325808273 5.960000e-70 276.0
16 TraesCS4D01G177800 chr1B 73.183 399 84 13 2915 3295 325807188 325807581 8.220000e-24 122.0
17 TraesCS4D01G177800 chr5B 94.706 170 9 0 2573 2742 573003545 573003714 1.290000e-66 265.0
18 TraesCS4D01G177800 chr7B 95.181 166 8 0 2577 2742 244640660 244640495 4.640000e-66 263.0
19 TraesCS4D01G177800 chr7A 93.678 174 10 1 2573 2745 696171915 696172088 6.000000e-65 259.0
20 TraesCS4D01G177800 chr2D 94.118 170 10 0 2573 2742 268894294 268894463 6.000000e-65 259.0
21 TraesCS4D01G177800 chr2D 80.822 219 25 4 1272 1473 145401896 145402114 8.100000e-34 156.0
22 TraesCS4D01G177800 chr1D 76.000 575 92 34 3432 3972 225700146 225700708 7.760000e-64 255.0
23 TraesCS4D01G177800 chr1D 86.667 195 15 7 1208 1395 257064861 257065051 7.930000e-49 206.0
24 TraesCS4D01G177800 chr1D 72.093 344 83 9 209 546 211495486 211495150 2.320000e-14 91.6
25 TraesCS4D01G177800 chr1A 83.673 294 24 8 1208 1477 288147799 288148092 7.760000e-64 255.0
26 TraesCS4D01G177800 chr5A 84.342 281 21 10 1214 1471 423672587 423672867 2.790000e-63 254.0
27 TraesCS4D01G177800 chr5A 83.456 272 35 8 1207 1470 493298845 493298576 1.680000e-60 244.0
28 TraesCS4D01G177800 chr3D 83.972 287 22 9 1208 1471 467158606 467158321 2.790000e-63 254.0
29 TraesCS4D01G177800 chr3D 100.000 28 0 0 2961 2988 347448735 347448708 1.100000e-02 52.8
30 TraesCS4D01G177800 chr6D 83.681 288 24 8 1209 1473 179949759 179949472 3.610000e-62 250.0
31 TraesCS4D01G177800 chr6D 88.525 61 6 1 3878 3938 91560374 91560315 8.390000e-09 73.1
32 TraesCS4D01G177800 chr2A 83.624 287 24 7 1208 1471 539583592 539583306 1.300000e-61 248.0
33 TraesCS4D01G177800 chr2A 83.688 282 23 10 1212 1470 74681985 74682266 1.680000e-60 244.0
34 TraesCS4D01G177800 chr2A 75.536 560 92 28 3402 3938 170913666 170914203 3.640000e-57 233.0
35 TraesCS4D01G177800 chr2A 89.189 111 12 0 1362 1472 716886111 716886221 8.160000e-29 139.0
36 TraesCS4D01G177800 chr7D 82.517 286 25 9 1208 1470 511327495 511327778 1.690000e-55 228.0
37 TraesCS4D01G177800 chr7D 81.959 194 17 8 1297 1473 70825814 70826006 1.360000e-31 148.0
38 TraesCS4D01G177800 chr3B 81.293 294 27 14 1207 1473 87719416 87719708 4.740000e-51 213.0
39 TraesCS4D01G177800 chr3B 92.857 42 3 0 3894 3935 603404496 603404537 1.820000e-05 62.1
40 TraesCS4D01G177800 chr5D 74.619 394 55 25 3552 3901 510483884 510484276 1.370000e-26 132.0
41 TraesCS4D01G177800 chr6B 90.164 61 5 1 3878 3938 175712871 175712812 1.800000e-10 78.7
42 TraesCS4D01G177800 chr6A 90.164 61 5 1 3878 3938 110335495 110335436 1.800000e-10 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G177800 chr4D 309501234 309507269 6035 True 11147.000000 11147 100.000000 1 6036 1 chr4D.!!$R1 6035
1 TraesCS4D01G177800 chr4B 386204228 386212407 8179 True 2697.333333 3428 93.287333 587 6036 3 chr4B.!!$R2 5449
2 TraesCS4D01G177800 chr4A 165749730 165756091 6361 False 1101.600000 2311 90.256600 594 6036 5 chr4A.!!$F2 5442
3 TraesCS4D01G177800 chr2B 216851476 216852004 528 False 283.000000 283 76.782000 3400 3938 1 chr2B.!!$F1 538
4 TraesCS4D01G177800 chr1D 225700146 225700708 562 False 255.000000 255 76.000000 3432 3972 1 chr1D.!!$F1 540
5 TraesCS4D01G177800 chr2A 170913666 170914203 537 False 233.000000 233 75.536000 3402 3938 1 chr2A.!!$F2 536

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
562 563 0.029300 GCAATGTGTGTCGCTGTGTT 59.971 50.000 0.00 0.00 0.00 3.32 F
836 842 0.107993 CATGGCTTCTCTTCTCCGCA 60.108 55.000 0.00 0.00 0.00 5.69 F
837 843 0.177604 ATGGCTTCTCTTCTCCGCAG 59.822 55.000 0.00 0.00 0.00 5.18 F
1748 1795 1.839994 TGTTCCTTGAGGATAGGCAGG 59.160 52.381 0.00 0.00 44.98 4.85 F
2068 2115 2.080693 GTATGTCATGGCCGTGTTTCA 58.919 47.619 24.24 20.08 0.00 2.69 F
3044 4335 0.109342 CACTGCCCACTCCACTTTCT 59.891 55.000 0.00 0.00 0.00 2.52 F
3085 4380 0.184933 CCTCCTCTCCGGTCATCTCT 59.815 60.000 0.00 0.00 0.00 3.10 F
3101 4396 0.543277 CTCTGGCATGGCTAGGAACA 59.457 55.000 21.08 0.00 37.73 3.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1830 1877 2.097036 CTGCAGCATTTCCTTGATCCA 58.903 47.619 0.00 0.00 0.00 3.41 R
2581 2639 0.889186 CTTTACCACTGCGCCAAGGT 60.889 55.000 17.12 17.12 38.14 3.50 R
2728 2797 1.362224 TTCTCTAAAGGGCAGCCTGT 58.638 50.000 12.43 0.00 0.00 4.00 R
2868 2959 0.179004 TTTTCCGCCCAGACATGTGT 60.179 50.000 1.15 0.00 0.00 3.72 R
3121 4416 1.022735 GCTCCAAGTCGACGGATCTA 58.977 55.000 10.46 0.00 0.00 1.98 R
4275 5807 2.002586 CTGATACCAGCCTGTTCAACG 58.997 52.381 0.00 0.00 33.07 4.10 R
5011 6588 2.007608 CTGTAGTCAGGATCGTCGTCA 58.992 52.381 0.00 0.00 37.97 4.35 R
5131 9377 3.202097 TCGTTCACACAAAAGATCAGCA 58.798 40.909 0.00 0.00 0.00 4.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 6.699575 GTCCATGCCAAGTTCTTTATGTAT 57.300 37.500 0.00 0.00 0.00 2.29
24 25 6.498304 GTCCATGCCAAGTTCTTTATGTATG 58.502 40.000 0.00 0.00 0.00 2.39
25 26 5.593909 TCCATGCCAAGTTCTTTATGTATGG 59.406 40.000 12.69 12.69 35.82 2.74
26 27 5.593909 CCATGCCAAGTTCTTTATGTATGGA 59.406 40.000 13.20 0.00 36.19 3.41
27 28 6.460123 CCATGCCAAGTTCTTTATGTATGGAC 60.460 42.308 13.20 0.00 36.19 4.02
28 29 5.565509 TGCCAAGTTCTTTATGTATGGACA 58.434 37.500 0.00 0.00 40.72 4.02
29 30 6.007076 TGCCAAGTTCTTTATGTATGGACAA 58.993 36.000 0.00 0.00 39.59 3.18
30 31 6.663093 TGCCAAGTTCTTTATGTATGGACAAT 59.337 34.615 0.00 0.00 39.59 2.71
31 32 7.178274 TGCCAAGTTCTTTATGTATGGACAATT 59.822 33.333 0.00 0.00 39.59 2.32
32 33 7.702348 GCCAAGTTCTTTATGTATGGACAATTC 59.298 37.037 0.00 0.00 39.59 2.17
33 34 8.190784 CCAAGTTCTTTATGTATGGACAATTCC 58.809 37.037 0.00 0.00 39.59 3.01
34 35 8.960591 CAAGTTCTTTATGTATGGACAATTCCT 58.039 33.333 0.00 0.00 43.31 3.36
35 36 8.738645 AGTTCTTTATGTATGGACAATTCCTC 57.261 34.615 0.00 0.00 43.31 3.71
36 37 7.775561 AGTTCTTTATGTATGGACAATTCCTCC 59.224 37.037 0.00 0.00 43.31 4.30
37 38 7.206789 TCTTTATGTATGGACAATTCCTCCA 57.793 36.000 4.20 4.20 43.31 3.86
38 39 7.638444 TCTTTATGTATGGACAATTCCTCCAA 58.362 34.615 5.62 0.00 43.31 3.53
39 40 8.112822 TCTTTATGTATGGACAATTCCTCCAAA 58.887 33.333 5.62 0.00 43.31 3.28
40 41 8.837099 TTTATGTATGGACAATTCCTCCAAAT 57.163 30.769 5.62 3.91 43.31 2.32
41 42 8.837099 TTATGTATGGACAATTCCTCCAAATT 57.163 30.769 5.62 0.00 43.31 1.82
43 44 5.421693 TGTATGGACAATTCCTCCAAATTGG 59.578 40.000 5.48 5.48 46.32 3.16
44 45 3.855668 TGGACAATTCCTCCAAATTGGT 58.144 40.909 12.28 0.00 46.32 3.67
45 46 4.230455 TGGACAATTCCTCCAAATTGGTT 58.770 39.130 12.28 0.00 46.32 3.67
46 47 4.040217 TGGACAATTCCTCCAAATTGGTTG 59.960 41.667 12.28 10.83 46.32 3.77
47 48 3.996363 GACAATTCCTCCAAATTGGTTGC 59.004 43.478 12.28 2.34 46.32 4.17
48 49 3.244526 ACAATTCCTCCAAATTGGTTGCC 60.245 43.478 12.28 0.00 46.32 4.52
49 50 2.094100 TTCCTCCAAATTGGTTGCCA 57.906 45.000 12.28 0.00 39.03 4.92
59 60 2.961526 TTGGTTGCCAAACGCTTTAA 57.038 40.000 0.00 0.00 40.92 1.52
60 61 2.211353 TGGTTGCCAAACGCTTTAAC 57.789 45.000 0.00 0.00 37.15 2.01
61 62 1.476891 TGGTTGCCAAACGCTTTAACA 59.523 42.857 0.00 0.00 37.15 2.41
62 63 2.101582 TGGTTGCCAAACGCTTTAACAT 59.898 40.909 0.00 0.00 37.15 2.71
63 64 2.729360 GGTTGCCAAACGCTTTAACATC 59.271 45.455 0.00 0.00 37.15 3.06
64 65 2.715737 TGCCAAACGCTTTAACATCC 57.284 45.000 0.00 0.00 38.78 3.51
65 66 2.235016 TGCCAAACGCTTTAACATCCT 58.765 42.857 0.00 0.00 38.78 3.24
66 67 3.413327 TGCCAAACGCTTTAACATCCTA 58.587 40.909 0.00 0.00 38.78 2.94
67 68 3.438781 TGCCAAACGCTTTAACATCCTAG 59.561 43.478 0.00 0.00 38.78 3.02
68 69 3.730963 GCCAAACGCTTTAACATCCTAGC 60.731 47.826 0.00 0.00 0.00 3.42
69 70 3.438781 CCAAACGCTTTAACATCCTAGCA 59.561 43.478 0.00 0.00 33.29 3.49
70 71 4.403453 CAAACGCTTTAACATCCTAGCAC 58.597 43.478 0.00 0.00 33.29 4.40
71 72 2.268298 ACGCTTTAACATCCTAGCACG 58.732 47.619 0.00 0.00 33.29 5.34
72 73 1.593006 CGCTTTAACATCCTAGCACGG 59.407 52.381 0.00 0.00 33.29 4.94
73 74 2.629051 GCTTTAACATCCTAGCACGGT 58.371 47.619 0.00 0.00 33.88 4.83
74 75 3.735820 CGCTTTAACATCCTAGCACGGTA 60.736 47.826 0.00 0.00 33.29 4.02
75 76 3.802685 GCTTTAACATCCTAGCACGGTAG 59.197 47.826 0.00 0.00 33.88 3.18
76 77 4.369182 CTTTAACATCCTAGCACGGTAGG 58.631 47.826 14.85 14.85 41.09 3.18
77 78 0.464452 AACATCCTAGCACGGTAGGC 59.536 55.000 15.96 0.00 39.73 3.93
78 79 0.397254 ACATCCTAGCACGGTAGGCT 60.397 55.000 15.96 5.24 45.18 4.58
79 80 0.753262 CATCCTAGCACGGTAGGCTT 59.247 55.000 15.96 4.94 42.62 4.35
80 81 0.753262 ATCCTAGCACGGTAGGCTTG 59.247 55.000 15.96 0.00 42.62 4.01
81 82 1.521681 CCTAGCACGGTAGGCTTGC 60.522 63.158 9.26 0.60 42.62 4.01
82 83 1.218047 CTAGCACGGTAGGCTTGCA 59.782 57.895 11.17 0.00 42.62 4.08
83 84 1.079405 TAGCACGGTAGGCTTGCAC 60.079 57.895 11.17 0.00 42.62 4.57
84 85 2.829043 TAGCACGGTAGGCTTGCACG 62.829 60.000 11.17 5.19 42.62 5.34
85 86 2.048597 CACGGTAGGCTTGCACGA 60.049 61.111 0.00 0.00 0.00 4.35
86 87 1.447838 CACGGTAGGCTTGCACGAT 60.448 57.895 0.00 0.00 0.00 3.73
87 88 1.153628 ACGGTAGGCTTGCACGATC 60.154 57.895 0.00 0.00 0.00 3.69
88 89 1.141881 CGGTAGGCTTGCACGATCT 59.858 57.895 0.00 0.00 0.00 2.75
89 90 0.460284 CGGTAGGCTTGCACGATCTT 60.460 55.000 0.00 0.00 0.00 2.40
90 91 1.291132 GGTAGGCTTGCACGATCTTC 58.709 55.000 0.00 0.00 0.00 2.87
91 92 1.134670 GGTAGGCTTGCACGATCTTCT 60.135 52.381 0.00 0.00 0.00 2.85
92 93 1.929836 GTAGGCTTGCACGATCTTCTG 59.070 52.381 0.00 0.00 0.00 3.02
93 94 1.023513 AGGCTTGCACGATCTTCTGC 61.024 55.000 0.00 0.00 0.00 4.26
94 95 1.059994 GCTTGCACGATCTTCTGCG 59.940 57.895 0.00 0.00 36.08 5.18
95 96 1.630244 GCTTGCACGATCTTCTGCGT 61.630 55.000 0.00 0.00 42.11 5.24
96 97 0.792640 CTTGCACGATCTTCTGCGTT 59.207 50.000 0.00 0.00 38.92 4.84
97 98 1.195448 CTTGCACGATCTTCTGCGTTT 59.805 47.619 0.00 0.00 38.92 3.60
98 99 0.512518 TGCACGATCTTCTGCGTTTG 59.487 50.000 0.00 0.00 38.92 2.93
99 100 0.512952 GCACGATCTTCTGCGTTTGT 59.487 50.000 0.00 0.00 38.92 2.83
100 101 1.069906 GCACGATCTTCTGCGTTTGTT 60.070 47.619 0.00 0.00 38.92 2.83
101 102 2.563976 CACGATCTTCTGCGTTTGTTG 58.436 47.619 0.00 0.00 38.92 3.33
102 103 2.220824 CACGATCTTCTGCGTTTGTTGA 59.779 45.455 0.00 0.00 38.92 3.18
103 104 3.067106 ACGATCTTCTGCGTTTGTTGAT 58.933 40.909 0.00 0.00 37.48 2.57
104 105 3.498397 ACGATCTTCTGCGTTTGTTGATT 59.502 39.130 0.00 0.00 37.48 2.57
105 106 4.024048 ACGATCTTCTGCGTTTGTTGATTT 60.024 37.500 0.00 0.00 37.48 2.17
106 107 4.911610 CGATCTTCTGCGTTTGTTGATTTT 59.088 37.500 0.00 0.00 0.00 1.82
107 108 5.058492 CGATCTTCTGCGTTTGTTGATTTTC 59.942 40.000 0.00 0.00 0.00 2.29
108 109 4.606961 TCTTCTGCGTTTGTTGATTTTCC 58.393 39.130 0.00 0.00 0.00 3.13
109 110 2.993545 TCTGCGTTTGTTGATTTTCCG 58.006 42.857 0.00 0.00 0.00 4.30
110 111 2.614520 TCTGCGTTTGTTGATTTTCCGA 59.385 40.909 0.00 0.00 0.00 4.55
111 112 2.719046 CTGCGTTTGTTGATTTTCCGAC 59.281 45.455 0.00 0.00 0.00 4.79
112 113 2.097629 TGCGTTTGTTGATTTTCCGACA 59.902 40.909 0.00 0.00 0.00 4.35
113 114 3.243234 TGCGTTTGTTGATTTTCCGACAT 60.243 39.130 0.00 0.00 31.10 3.06
114 115 3.360758 GCGTTTGTTGATTTTCCGACATC 59.639 43.478 0.00 0.00 31.10 3.06
115 116 4.783242 CGTTTGTTGATTTTCCGACATCT 58.217 39.130 0.00 0.00 31.10 2.90
116 117 5.615984 GCGTTTGTTGATTTTCCGACATCTA 60.616 40.000 0.00 0.00 31.10 1.98
117 118 6.015504 CGTTTGTTGATTTTCCGACATCTAG 58.984 40.000 0.00 0.00 31.10 2.43
118 119 6.314784 GTTTGTTGATTTTCCGACATCTAGG 58.685 40.000 0.00 0.00 31.10 3.02
119 120 5.160607 TGTTGATTTTCCGACATCTAGGT 57.839 39.130 0.00 0.00 0.00 3.08
120 121 4.935205 TGTTGATTTTCCGACATCTAGGTG 59.065 41.667 0.04 0.04 0.00 4.00
121 122 4.819105 TGATTTTCCGACATCTAGGTGT 57.181 40.909 8.81 8.81 34.39 4.16
122 123 4.503910 TGATTTTCCGACATCTAGGTGTG 58.496 43.478 14.85 6.00 31.16 3.82
123 124 2.380084 TTTCCGACATCTAGGTGTGC 57.620 50.000 14.85 4.50 31.16 4.57
124 125 1.262417 TTCCGACATCTAGGTGTGCA 58.738 50.000 14.85 0.00 31.16 4.57
125 126 0.817654 TCCGACATCTAGGTGTGCAG 59.182 55.000 14.85 4.66 31.16 4.41
126 127 0.807667 CCGACATCTAGGTGTGCAGC 60.808 60.000 14.85 0.00 31.16 5.25
127 128 0.174389 CGACATCTAGGTGTGCAGCT 59.826 55.000 14.85 8.95 42.47 4.24
128 129 1.649664 GACATCTAGGTGTGCAGCTG 58.350 55.000 14.85 10.11 39.78 4.24
129 130 0.979665 ACATCTAGGTGTGCAGCTGT 59.020 50.000 16.64 0.00 39.78 4.40
130 131 1.349026 ACATCTAGGTGTGCAGCTGTT 59.651 47.619 16.64 0.00 39.78 3.16
131 132 1.736126 CATCTAGGTGTGCAGCTGTTG 59.264 52.381 16.64 5.27 39.78 3.33
132 133 0.758734 TCTAGGTGTGCAGCTGTTGT 59.241 50.000 16.64 0.00 39.78 3.32
133 134 0.870393 CTAGGTGTGCAGCTGTTGTG 59.130 55.000 16.64 0.00 39.78 3.33
134 135 0.180171 TAGGTGTGCAGCTGTTGTGT 59.820 50.000 16.64 0.00 39.78 3.72
135 136 1.064621 GGTGTGCAGCTGTTGTGTG 59.935 57.895 16.64 0.00 0.00 3.82
136 137 1.656818 GGTGTGCAGCTGTTGTGTGT 61.657 55.000 16.64 0.00 0.00 3.72
137 138 0.248215 GTGTGCAGCTGTTGTGTGTC 60.248 55.000 16.64 0.00 0.00 3.67
138 139 1.356624 GTGCAGCTGTTGTGTGTCC 59.643 57.895 16.64 0.00 0.00 4.02
139 140 1.077858 TGCAGCTGTTGTGTGTCCA 60.078 52.632 16.64 0.00 0.00 4.02
140 141 0.466007 TGCAGCTGTTGTGTGTCCAT 60.466 50.000 16.64 0.00 0.00 3.41
141 142 0.239347 GCAGCTGTTGTGTGTCCATC 59.761 55.000 16.64 0.00 0.00 3.51
142 143 0.514255 CAGCTGTTGTGTGTCCATCG 59.486 55.000 5.25 0.00 0.00 3.84
143 144 1.207593 GCTGTTGTGTGTCCATCGC 59.792 57.895 0.00 0.00 0.00 4.58
144 145 1.868997 CTGTTGTGTGTCCATCGCC 59.131 57.895 0.00 0.00 0.00 5.54
145 146 0.603707 CTGTTGTGTGTCCATCGCCT 60.604 55.000 0.00 0.00 0.00 5.52
146 147 0.602638 TGTTGTGTGTCCATCGCCTC 60.603 55.000 0.00 0.00 0.00 4.70
147 148 1.003839 TTGTGTGTCCATCGCCTCC 60.004 57.895 0.00 0.00 0.00 4.30
148 149 2.509336 GTGTGTCCATCGCCTCCG 60.509 66.667 0.00 0.00 0.00 4.63
149 150 3.770040 TGTGTCCATCGCCTCCGG 61.770 66.667 0.00 0.00 34.56 5.14
175 176 4.530875 GGATTCTTCCACTTGGATCATGT 58.469 43.478 0.00 0.00 44.98 3.21
176 177 4.952335 GGATTCTTCCACTTGGATCATGTT 59.048 41.667 0.00 0.00 44.98 2.71
177 178 5.067023 GGATTCTTCCACTTGGATCATGTTC 59.933 44.000 0.00 0.00 44.98 3.18
178 179 4.639078 TCTTCCACTTGGATCATGTTCA 57.361 40.909 0.00 0.00 44.98 3.18
179 180 5.183530 TCTTCCACTTGGATCATGTTCAT 57.816 39.130 0.00 0.00 44.98 2.57
180 181 5.188434 TCTTCCACTTGGATCATGTTCATC 58.812 41.667 0.00 0.00 44.98 2.92
181 182 3.534554 TCCACTTGGATCATGTTCATCG 58.465 45.455 6.14 0.00 39.78 3.84
182 183 2.615447 CCACTTGGATCATGTTCATCGG 59.385 50.000 6.14 0.00 37.39 4.18
183 184 3.273434 CACTTGGATCATGTTCATCGGT 58.727 45.455 6.14 0.00 0.00 4.69
184 185 3.064408 CACTTGGATCATGTTCATCGGTG 59.936 47.826 6.14 0.00 0.00 4.94
185 186 3.055167 ACTTGGATCATGTTCATCGGTGA 60.055 43.478 0.00 0.00 0.00 4.02
186 187 2.905075 TGGATCATGTTCATCGGTGAC 58.095 47.619 0.00 0.00 33.11 3.67
187 188 2.501316 TGGATCATGTTCATCGGTGACT 59.499 45.455 0.00 0.00 33.11 3.41
188 189 3.126831 GGATCATGTTCATCGGTGACTC 58.873 50.000 0.00 0.00 33.11 3.36
189 190 2.672961 TCATGTTCATCGGTGACTCC 57.327 50.000 0.00 0.00 33.11 3.85
190 191 2.179427 TCATGTTCATCGGTGACTCCT 58.821 47.619 0.00 0.00 33.11 3.69
191 192 2.166459 TCATGTTCATCGGTGACTCCTC 59.834 50.000 0.00 0.00 33.11 3.71
192 193 0.895530 TGTTCATCGGTGACTCCTCC 59.104 55.000 0.00 0.00 33.11 4.30
193 194 1.187087 GTTCATCGGTGACTCCTCCT 58.813 55.000 0.00 0.00 33.11 3.69
194 195 1.550976 GTTCATCGGTGACTCCTCCTT 59.449 52.381 0.00 0.00 33.11 3.36
195 196 2.758979 GTTCATCGGTGACTCCTCCTTA 59.241 50.000 0.00 0.00 33.11 2.69
196 197 3.314307 TCATCGGTGACTCCTCCTTAT 57.686 47.619 0.00 0.00 0.00 1.73
197 198 3.223435 TCATCGGTGACTCCTCCTTATC 58.777 50.000 0.00 0.00 0.00 1.75
198 199 1.676746 TCGGTGACTCCTCCTTATCG 58.323 55.000 0.00 0.00 0.00 2.92
199 200 0.669077 CGGTGACTCCTCCTTATCGG 59.331 60.000 0.00 0.00 0.00 4.18
200 201 0.389757 GGTGACTCCTCCTTATCGGC 59.610 60.000 0.00 0.00 0.00 5.54
201 202 0.030908 GTGACTCCTCCTTATCGGCG 59.969 60.000 0.00 0.00 0.00 6.46
202 203 1.007154 GACTCCTCCTTATCGGCGC 60.007 63.158 0.00 0.00 0.00 6.53
203 204 2.340443 CTCCTCCTTATCGGCGCC 59.660 66.667 19.07 19.07 0.00 6.53
204 205 3.227792 CTCCTCCTTATCGGCGCCC 62.228 68.421 23.46 2.84 0.00 6.13
215 216 4.778143 GGCGCCCGGTTGAGACAT 62.778 66.667 18.11 0.00 0.00 3.06
216 217 2.746277 GCGCCCGGTTGAGACATT 60.746 61.111 0.00 0.00 0.00 2.71
217 218 2.332654 GCGCCCGGTTGAGACATTT 61.333 57.895 0.00 0.00 0.00 2.32
218 219 1.794222 CGCCCGGTTGAGACATTTC 59.206 57.895 0.00 0.00 0.00 2.17
219 220 0.953471 CGCCCGGTTGAGACATTTCA 60.953 55.000 0.00 0.00 0.00 2.69
220 221 1.243902 GCCCGGTTGAGACATTTCAA 58.756 50.000 0.00 0.00 34.83 2.69
221 222 1.818674 GCCCGGTTGAGACATTTCAAT 59.181 47.619 0.00 0.00 39.13 2.57
222 223 3.013921 GCCCGGTTGAGACATTTCAATA 58.986 45.455 0.00 0.00 39.13 1.90
223 224 3.065371 GCCCGGTTGAGACATTTCAATAG 59.935 47.826 0.00 0.00 39.13 1.73
224 225 4.513442 CCCGGTTGAGACATTTCAATAGA 58.487 43.478 0.00 0.00 39.13 1.98
225 226 4.332819 CCCGGTTGAGACATTTCAATAGAC 59.667 45.833 0.00 0.00 39.13 2.59
226 227 4.935205 CCGGTTGAGACATTTCAATAGACA 59.065 41.667 0.00 0.00 39.13 3.41
227 228 5.063944 CCGGTTGAGACATTTCAATAGACAG 59.936 44.000 0.00 0.00 39.13 3.51
228 229 5.869344 CGGTTGAGACATTTCAATAGACAGA 59.131 40.000 0.00 0.00 39.13 3.41
229 230 6.035435 CGGTTGAGACATTTCAATAGACAGAG 59.965 42.308 0.00 0.00 39.13 3.35
230 231 7.099764 GGTTGAGACATTTCAATAGACAGAGA 58.900 38.462 0.00 0.00 39.13 3.10
231 232 7.277539 GGTTGAGACATTTCAATAGACAGAGAG 59.722 40.741 0.00 0.00 39.13 3.20
232 233 6.871844 TGAGACATTTCAATAGACAGAGAGG 58.128 40.000 0.00 0.00 0.00 3.69
233 234 5.669477 AGACATTTCAATAGACAGAGAGGC 58.331 41.667 0.00 0.00 0.00 4.70
234 235 5.188555 AGACATTTCAATAGACAGAGAGGCA 59.811 40.000 0.00 0.00 0.00 4.75
235 236 5.181748 ACATTTCAATAGACAGAGAGGCAC 58.818 41.667 0.00 0.00 0.00 5.01
236 237 3.895232 TTCAATAGACAGAGAGGCACC 57.105 47.619 0.00 0.00 0.00 5.01
237 238 1.751351 TCAATAGACAGAGAGGCACCG 59.249 52.381 0.00 0.00 0.00 4.94
238 239 1.751351 CAATAGACAGAGAGGCACCGA 59.249 52.381 0.00 0.00 0.00 4.69
239 240 1.394618 ATAGACAGAGAGGCACCGAC 58.605 55.000 0.00 0.00 0.00 4.79
240 241 1.025113 TAGACAGAGAGGCACCGACG 61.025 60.000 0.00 0.00 0.00 5.12
241 242 3.343788 GACAGAGAGGCACCGACGG 62.344 68.421 13.61 13.61 0.00 4.79
242 243 4.135153 CAGAGAGGCACCGACGGG 62.135 72.222 20.00 8.43 40.11 5.28
250 251 2.819595 CACCGACGGGCATGGAAG 60.820 66.667 20.00 0.00 36.48 3.46
251 252 4.778143 ACCGACGGGCATGGAAGC 62.778 66.667 20.00 0.00 36.48 3.86
258 259 3.425422 GGCATGGAAGCCGACATC 58.575 61.111 0.00 0.00 46.12 3.06
259 260 1.451927 GGCATGGAAGCCGACATCA 60.452 57.895 0.00 0.00 46.12 3.07
260 261 0.820891 GGCATGGAAGCCGACATCAT 60.821 55.000 0.00 0.00 46.12 2.45
261 262 1.027357 GCATGGAAGCCGACATCATT 58.973 50.000 0.00 0.00 0.00 2.57
262 263 1.268896 GCATGGAAGCCGACATCATTG 60.269 52.381 0.00 0.00 0.00 2.82
263 264 2.291365 CATGGAAGCCGACATCATTGA 58.709 47.619 0.00 0.00 0.00 2.57
264 265 2.028420 TGGAAGCCGACATCATTGAG 57.972 50.000 0.00 0.00 0.00 3.02
265 266 0.659957 GGAAGCCGACATCATTGAGC 59.340 55.000 0.00 0.00 0.00 4.26
266 267 0.302890 GAAGCCGACATCATTGAGCG 59.697 55.000 0.00 0.00 0.00 5.03
267 268 1.091771 AAGCCGACATCATTGAGCGG 61.092 55.000 16.51 16.51 42.77 5.52
268 269 1.521457 GCCGACATCATTGAGCGGA 60.521 57.895 22.03 0.00 42.63 5.54
269 270 1.766143 GCCGACATCATTGAGCGGAC 61.766 60.000 22.03 13.10 42.63 4.79
270 271 0.460109 CCGACATCATTGAGCGGACA 60.460 55.000 16.05 0.00 42.63 4.02
271 272 1.358877 CGACATCATTGAGCGGACAA 58.641 50.000 0.00 0.00 0.00 3.18
272 273 1.325640 CGACATCATTGAGCGGACAAG 59.674 52.381 0.00 0.00 33.22 3.16
273 274 1.063174 GACATCATTGAGCGGACAAGC 59.937 52.381 0.00 0.00 33.22 4.01
274 275 1.089112 CATCATTGAGCGGACAAGCA 58.911 50.000 0.00 0.00 40.15 3.91
275 276 1.089920 ATCATTGAGCGGACAAGCAC 58.910 50.000 0.00 0.00 40.15 4.40
276 277 0.955428 TCATTGAGCGGACAAGCACC 60.955 55.000 0.00 0.00 40.15 5.01
283 284 2.338984 GGACAAGCACCGACGACT 59.661 61.111 0.00 0.00 0.00 4.18
284 285 2.022129 GGACAAGCACCGACGACTG 61.022 63.158 0.00 0.00 0.00 3.51
285 286 2.658707 GACAAGCACCGACGACTGC 61.659 63.158 8.88 8.88 0.00 4.40
286 287 3.767230 CAAGCACCGACGACTGCG 61.767 66.667 10.61 0.00 44.79 5.18
287 288 3.973516 AAGCACCGACGACTGCGA 61.974 61.111 10.61 0.00 41.64 5.10
288 289 4.702081 AGCACCGACGACTGCGAC 62.702 66.667 10.61 0.00 41.64 5.19
289 290 4.702081 GCACCGACGACTGCGACT 62.702 66.667 0.00 0.00 41.64 4.18
290 291 2.502080 CACCGACGACTGCGACTC 60.502 66.667 0.00 0.00 41.64 3.36
291 292 3.735029 ACCGACGACTGCGACTCC 61.735 66.667 0.00 0.00 41.64 3.85
292 293 4.813526 CCGACGACTGCGACTCCG 62.814 72.222 0.00 0.00 41.64 4.63
293 294 4.086178 CGACGACTGCGACTCCGT 62.086 66.667 0.00 0.00 41.64 4.69
294 295 2.502080 GACGACTGCGACTCCGTG 60.502 66.667 0.00 0.00 41.64 4.94
295 296 2.962827 GACGACTGCGACTCCGTGA 61.963 63.158 0.00 0.00 41.64 4.35
296 297 2.254350 CGACTGCGACTCCGTGAA 59.746 61.111 0.00 0.00 40.82 3.18
297 298 1.797933 CGACTGCGACTCCGTGAAG 60.798 63.158 0.00 0.00 40.82 3.02
298 299 1.444553 GACTGCGACTCCGTGAAGG 60.445 63.158 0.00 0.00 42.97 3.46
299 300 2.143594 GACTGCGACTCCGTGAAGGT 62.144 60.000 0.00 0.00 41.99 3.50
300 301 1.734477 CTGCGACTCCGTGAAGGTG 60.734 63.158 0.00 0.00 41.99 4.00
302 303 1.300697 GCGACTCCGTGAAGGTGTT 60.301 57.895 0.00 0.00 45.87 3.32
303 304 1.282930 GCGACTCCGTGAAGGTGTTC 61.283 60.000 0.00 0.00 45.87 3.18
304 305 0.314302 CGACTCCGTGAAGGTGTTCT 59.686 55.000 0.00 0.00 45.87 3.01
305 306 1.666311 CGACTCCGTGAAGGTGTTCTC 60.666 57.143 0.00 0.00 45.87 2.87
306 307 0.680061 ACTCCGTGAAGGTGTTCTCC 59.320 55.000 0.00 0.00 43.65 3.71
307 308 0.679505 CTCCGTGAAGGTGTTCTCCA 59.320 55.000 0.00 0.00 41.99 3.86
308 309 0.391597 TCCGTGAAGGTGTTCTCCAC 59.608 55.000 0.00 0.00 43.74 4.02
309 310 0.944311 CCGTGAAGGTGTTCTCCACG 60.944 60.000 0.00 0.00 45.52 4.94
310 311 0.249322 CGTGAAGGTGTTCTCCACGT 60.249 55.000 0.00 0.00 45.52 4.49
315 316 1.663695 AGGTGTTCTCCACGTTGTTG 58.336 50.000 0.00 0.00 45.52 3.33
316 317 1.208535 AGGTGTTCTCCACGTTGTTGA 59.791 47.619 0.00 0.00 45.52 3.18
317 318 1.597663 GGTGTTCTCCACGTTGTTGAG 59.402 52.381 0.00 0.00 45.52 3.02
318 319 1.597663 GTGTTCTCCACGTTGTTGAGG 59.402 52.381 0.00 0.00 33.61 3.86
319 320 1.208535 TGTTCTCCACGTTGTTGAGGT 59.791 47.619 0.00 0.00 0.00 3.85
320 321 1.865340 GTTCTCCACGTTGTTGAGGTC 59.135 52.381 0.00 0.00 0.00 3.85
321 322 0.031585 TCTCCACGTTGTTGAGGTCG 59.968 55.000 0.00 0.00 0.00 4.79
322 323 0.031585 CTCCACGTTGTTGAGGTCGA 59.968 55.000 0.00 0.00 0.00 4.20
323 324 0.249155 TCCACGTTGTTGAGGTCGAC 60.249 55.000 7.13 7.13 0.00 4.20
324 325 1.545614 CCACGTTGTTGAGGTCGACG 61.546 60.000 9.92 0.00 44.96 5.12
325 326 0.593008 CACGTTGTTGAGGTCGACGA 60.593 55.000 9.92 0.00 42.97 4.20
326 327 0.313043 ACGTTGTTGAGGTCGACGAT 59.687 50.000 9.92 0.00 42.97 3.73
327 328 0.708370 CGTTGTTGAGGTCGACGATG 59.292 55.000 9.92 0.00 42.97 3.84
328 329 0.438830 GTTGTTGAGGTCGACGATGC 59.561 55.000 9.92 0.00 32.90 3.91
329 330 0.032815 TTGTTGAGGTCGACGATGCA 59.967 50.000 9.92 1.84 32.90 3.96
330 331 0.666274 TGTTGAGGTCGACGATGCAC 60.666 55.000 9.92 3.19 32.90 4.57
350 351 3.576356 CATGTGATGGCCGGCGAC 61.576 66.667 22.54 14.57 0.00 5.19
362 363 2.813908 GGCGACGATGGTGGACAC 60.814 66.667 0.00 0.00 28.91 3.67
363 364 3.179265 GCGACGATGGTGGACACG 61.179 66.667 0.00 0.00 0.00 4.49
364 365 2.506217 CGACGATGGTGGACACGG 60.506 66.667 0.00 0.00 0.00 4.94
365 366 2.967397 GACGATGGTGGACACGGA 59.033 61.111 0.00 0.00 0.00 4.69
366 367 1.445582 GACGATGGTGGACACGGAC 60.446 63.158 0.00 0.00 0.00 4.79
367 368 1.874345 GACGATGGTGGACACGGACT 61.874 60.000 0.00 0.00 0.00 3.85
368 369 1.446099 CGATGGTGGACACGGACTG 60.446 63.158 0.00 0.00 0.00 3.51
369 370 1.741770 GATGGTGGACACGGACTGC 60.742 63.158 0.00 0.00 0.00 4.40
370 371 2.172483 GATGGTGGACACGGACTGCT 62.172 60.000 0.00 0.00 0.00 4.24
371 372 0.902984 ATGGTGGACACGGACTGCTA 60.903 55.000 0.00 0.00 0.00 3.49
372 373 0.902984 TGGTGGACACGGACTGCTAT 60.903 55.000 0.00 0.00 0.00 2.97
373 374 0.249398 GGTGGACACGGACTGCTATT 59.751 55.000 0.00 0.00 0.00 1.73
374 375 1.359848 GTGGACACGGACTGCTATTG 58.640 55.000 0.00 0.00 0.00 1.90
375 376 0.391130 TGGACACGGACTGCTATTGC 60.391 55.000 0.00 0.00 40.20 3.56
376 377 0.108138 GGACACGGACTGCTATTGCT 60.108 55.000 0.00 0.00 40.48 3.91
377 378 1.002366 GACACGGACTGCTATTGCTG 58.998 55.000 4.58 4.58 42.70 4.41
378 379 0.608130 ACACGGACTGCTATTGCTGA 59.392 50.000 12.54 0.00 40.66 4.26
379 380 1.208052 ACACGGACTGCTATTGCTGAT 59.792 47.619 12.54 0.00 40.66 2.90
380 381 1.863454 CACGGACTGCTATTGCTGATC 59.137 52.381 12.54 6.56 40.66 2.92
381 382 1.135046 CGGACTGCTATTGCTGATCG 58.865 55.000 12.54 10.83 40.66 3.69
382 383 1.269257 CGGACTGCTATTGCTGATCGA 60.269 52.381 12.54 0.00 40.66 3.59
383 384 2.402305 GGACTGCTATTGCTGATCGAG 58.598 52.381 12.54 0.00 40.66 4.04
392 393 3.842923 CTGATCGAGCGGCCAGGT 61.843 66.667 2.24 0.25 0.00 4.00
393 394 4.147449 TGATCGAGCGGCCAGGTG 62.147 66.667 2.24 0.00 0.00 4.00
394 395 4.899239 GATCGAGCGGCCAGGTGG 62.899 72.222 2.24 2.85 38.53 4.61
406 407 2.315925 CCAGGTGGCATAGTAGTGTG 57.684 55.000 0.00 0.00 0.00 3.82
407 408 1.134401 CCAGGTGGCATAGTAGTGTGG 60.134 57.143 0.00 0.00 0.00 4.17
408 409 0.541863 AGGTGGCATAGTAGTGTGGC 59.458 55.000 13.16 13.16 40.39 5.01
409 410 0.810031 GGTGGCATAGTAGTGTGGCG 60.810 60.000 14.72 0.00 42.60 5.69
410 411 0.810031 GTGGCATAGTAGTGTGGCGG 60.810 60.000 14.72 0.00 42.60 6.13
411 412 0.973496 TGGCATAGTAGTGTGGCGGA 60.973 55.000 14.72 0.00 42.60 5.54
412 413 0.393077 GGCATAGTAGTGTGGCGGAT 59.607 55.000 5.11 0.00 30.58 4.18
413 414 1.502231 GCATAGTAGTGTGGCGGATG 58.498 55.000 0.00 0.00 0.00 3.51
414 415 1.502231 CATAGTAGTGTGGCGGATGC 58.498 55.000 0.00 0.00 41.71 3.91
415 416 0.032130 ATAGTAGTGTGGCGGATGCG 59.968 55.000 0.65 0.65 44.10 4.73
416 417 1.033202 TAGTAGTGTGGCGGATGCGA 61.033 55.000 12.10 0.00 44.10 5.10
428 429 3.716539 GATGCGACCGTGCCAGCTA 62.717 63.158 0.00 0.00 0.00 3.32
429 430 3.723235 ATGCGACCGTGCCAGCTAG 62.723 63.158 0.00 0.00 0.00 3.42
431 432 3.760035 CGACCGTGCCAGCTAGGT 61.760 66.667 8.87 8.87 40.61 3.08
432 433 2.184579 GACCGTGCCAGCTAGGTC 59.815 66.667 16.88 16.88 45.07 3.85
433 434 3.701604 GACCGTGCCAGCTAGGTCG 62.702 68.421 16.88 10.01 42.88 4.79
434 435 3.449227 CCGTGCCAGCTAGGTCGA 61.449 66.667 16.30 0.00 40.61 4.20
435 436 2.786495 CCGTGCCAGCTAGGTCGAT 61.786 63.158 16.30 0.00 40.61 3.59
436 437 1.589993 CGTGCCAGCTAGGTCGATG 60.590 63.158 0.00 0.00 40.61 3.84
437 438 1.227380 GTGCCAGCTAGGTCGATGG 60.227 63.158 0.00 0.00 43.18 3.51
438 439 1.685765 TGCCAGCTAGGTCGATGGT 60.686 57.895 2.64 0.00 42.33 3.55
439 440 1.227380 GCCAGCTAGGTCGATGGTG 60.227 63.158 2.64 3.36 42.33 4.17
440 441 1.676678 GCCAGCTAGGTCGATGGTGA 61.677 60.000 2.64 0.00 42.33 4.02
441 442 1.043816 CCAGCTAGGTCGATGGTGAT 58.956 55.000 0.00 0.00 35.77 3.06
442 443 1.414181 CCAGCTAGGTCGATGGTGATT 59.586 52.381 0.00 0.00 35.77 2.57
443 444 2.477825 CAGCTAGGTCGATGGTGATTG 58.522 52.381 0.00 0.00 0.00 2.67
444 445 1.202580 AGCTAGGTCGATGGTGATTGC 60.203 52.381 0.00 0.00 0.00 3.56
445 446 1.473257 GCTAGGTCGATGGTGATTGCA 60.473 52.381 0.00 0.00 0.00 4.08
446 447 2.205074 CTAGGTCGATGGTGATTGCAC 58.795 52.381 0.00 0.00 44.39 4.57
447 448 0.740868 AGGTCGATGGTGATTGCACG 60.741 55.000 0.00 0.00 46.09 5.34
448 449 0.739462 GGTCGATGGTGATTGCACGA 60.739 55.000 0.00 0.00 46.09 4.35
449 450 0.370273 GTCGATGGTGATTGCACGAC 59.630 55.000 6.49 6.49 46.09 4.34
450 451 0.739462 TCGATGGTGATTGCACGACC 60.739 55.000 0.00 0.00 46.09 4.79
451 452 1.018752 CGATGGTGATTGCACGACCA 61.019 55.000 11.97 11.97 46.09 4.02
452 453 0.729116 GATGGTGATTGCACGACCAG 59.271 55.000 14.30 0.00 46.09 4.00
453 454 1.308069 ATGGTGATTGCACGACCAGC 61.308 55.000 14.30 7.62 46.09 4.85
454 455 1.965930 GGTGATTGCACGACCAGCA 60.966 57.895 3.56 0.00 46.09 4.41
455 456 1.308069 GGTGATTGCACGACCAGCAT 61.308 55.000 3.56 0.00 46.09 3.79
456 457 0.097674 GTGATTGCACGACCAGCATC 59.902 55.000 0.00 0.00 42.33 3.91
457 458 1.026182 TGATTGCACGACCAGCATCC 61.026 55.000 0.00 0.00 42.33 3.51
458 459 2.040213 GATTGCACGACCAGCATCCG 62.040 60.000 0.00 0.00 42.33 4.18
459 460 2.803155 ATTGCACGACCAGCATCCGT 62.803 55.000 0.00 0.00 42.33 4.69
460 461 2.742372 GCACGACCAGCATCCGTT 60.742 61.111 0.00 0.00 33.96 4.44
461 462 3.027170 GCACGACCAGCATCCGTTG 62.027 63.158 0.00 0.00 33.96 4.10
462 463 1.374125 CACGACCAGCATCCGTTGA 60.374 57.895 0.00 0.00 33.96 3.18
463 464 0.740868 CACGACCAGCATCCGTTGAT 60.741 55.000 0.00 0.00 33.96 2.57
464 465 0.036388 ACGACCAGCATCCGTTGATT 60.036 50.000 0.00 0.00 32.03 2.57
465 466 0.652592 CGACCAGCATCCGTTGATTC 59.347 55.000 0.00 0.00 0.00 2.52
466 467 1.737838 GACCAGCATCCGTTGATTCA 58.262 50.000 0.00 0.00 0.00 2.57
467 468 1.398390 GACCAGCATCCGTTGATTCAC 59.602 52.381 0.00 0.00 0.00 3.18
468 469 1.271325 ACCAGCATCCGTTGATTCACA 60.271 47.619 0.00 0.00 0.00 3.58
469 470 2.019249 CCAGCATCCGTTGATTCACAT 58.981 47.619 0.00 0.00 0.00 3.21
470 471 2.223409 CCAGCATCCGTTGATTCACATG 60.223 50.000 0.00 0.00 0.00 3.21
471 472 1.402968 AGCATCCGTTGATTCACATGC 59.597 47.619 0.00 9.50 31.92 4.06
472 473 1.402968 GCATCCGTTGATTCACATGCT 59.597 47.619 0.00 0.00 29.98 3.79
473 474 2.159338 GCATCCGTTGATTCACATGCTT 60.159 45.455 0.00 0.00 29.98 3.91
474 475 3.065233 GCATCCGTTGATTCACATGCTTA 59.935 43.478 0.00 0.00 29.98 3.09
475 476 4.438608 GCATCCGTTGATTCACATGCTTAA 60.439 41.667 0.00 0.00 29.98 1.85
476 477 4.678509 TCCGTTGATTCACATGCTTAAC 57.321 40.909 0.00 0.00 0.00 2.01
477 478 3.438781 TCCGTTGATTCACATGCTTAACC 59.561 43.478 0.00 0.00 0.00 2.85
478 479 3.416277 CGTTGATTCACATGCTTAACCG 58.584 45.455 0.00 0.00 0.00 4.44
479 480 3.124466 CGTTGATTCACATGCTTAACCGA 59.876 43.478 0.00 0.00 0.00 4.69
480 481 4.651994 GTTGATTCACATGCTTAACCGAG 58.348 43.478 0.00 0.00 0.00 4.63
481 482 3.270027 TGATTCACATGCTTAACCGAGG 58.730 45.455 0.00 0.00 0.00 4.63
482 483 2.851263 TTCACATGCTTAACCGAGGT 57.149 45.000 0.00 0.00 0.00 3.85
483 484 2.093306 TCACATGCTTAACCGAGGTG 57.907 50.000 0.00 0.00 0.00 4.00
484 485 1.086696 CACATGCTTAACCGAGGTGG 58.913 55.000 0.00 0.00 46.41 4.61
493 494 4.954933 CCGAGGTGGTATTGGGTG 57.045 61.111 0.00 0.00 0.00 4.61
494 495 2.292866 CCGAGGTGGTATTGGGTGA 58.707 57.895 0.00 0.00 0.00 4.02
495 496 0.107848 CCGAGGTGGTATTGGGTGAC 60.108 60.000 0.00 0.00 0.00 3.67
508 509 4.612412 GTGACCGACCACCGCCAA 62.612 66.667 0.00 0.00 36.84 4.52
509 510 3.862991 TGACCGACCACCGCCAAA 61.863 61.111 0.00 0.00 36.84 3.28
510 511 3.047877 GACCGACCACCGCCAAAG 61.048 66.667 0.00 0.00 36.84 2.77
514 515 3.056328 GACCACCGCCAAAGCCTC 61.056 66.667 0.00 0.00 34.57 4.70
515 516 4.660938 ACCACCGCCAAAGCCTCC 62.661 66.667 0.00 0.00 34.57 4.30
516 517 4.351054 CCACCGCCAAAGCCTCCT 62.351 66.667 0.00 0.00 34.57 3.69
517 518 2.747855 CACCGCCAAAGCCTCCTC 60.748 66.667 0.00 0.00 34.57 3.71
518 519 4.035102 ACCGCCAAAGCCTCCTCC 62.035 66.667 0.00 0.00 34.57 4.30
519 520 4.803908 CCGCCAAAGCCTCCTCCC 62.804 72.222 0.00 0.00 34.57 4.30
520 521 3.721706 CGCCAAAGCCTCCTCCCT 61.722 66.667 0.00 0.00 34.57 4.20
521 522 2.273776 GCCAAAGCCTCCTCCCTC 59.726 66.667 0.00 0.00 0.00 4.30
522 523 2.304831 GCCAAAGCCTCCTCCCTCT 61.305 63.158 0.00 0.00 0.00 3.69
523 524 1.857638 GCCAAAGCCTCCTCCCTCTT 61.858 60.000 0.00 0.00 0.00 2.85
524 525 0.254462 CCAAAGCCTCCTCCCTCTTC 59.746 60.000 0.00 0.00 0.00 2.87
525 526 0.987294 CAAAGCCTCCTCCCTCTTCA 59.013 55.000 0.00 0.00 0.00 3.02
526 527 1.563410 CAAAGCCTCCTCCCTCTTCAT 59.437 52.381 0.00 0.00 0.00 2.57
527 528 1.506025 AAGCCTCCTCCCTCTTCATC 58.494 55.000 0.00 0.00 0.00 2.92
528 529 0.641601 AGCCTCCTCCCTCTTCATCT 59.358 55.000 0.00 0.00 0.00 2.90
529 530 1.862911 AGCCTCCTCCCTCTTCATCTA 59.137 52.381 0.00 0.00 0.00 1.98
530 531 2.454381 AGCCTCCTCCCTCTTCATCTAT 59.546 50.000 0.00 0.00 0.00 1.98
531 532 3.116395 AGCCTCCTCCCTCTTCATCTATT 60.116 47.826 0.00 0.00 0.00 1.73
532 533 3.650461 GCCTCCTCCCTCTTCATCTATTT 59.350 47.826 0.00 0.00 0.00 1.40
533 534 4.504689 GCCTCCTCCCTCTTCATCTATTTG 60.505 50.000 0.00 0.00 0.00 2.32
534 535 4.504689 CCTCCTCCCTCTTCATCTATTTGC 60.505 50.000 0.00 0.00 0.00 3.68
535 536 3.070159 TCCTCCCTCTTCATCTATTTGCG 59.930 47.826 0.00 0.00 0.00 4.85
536 537 3.397482 CTCCCTCTTCATCTATTTGCGG 58.603 50.000 0.00 0.00 0.00 5.69
537 538 1.876156 CCCTCTTCATCTATTTGCGGC 59.124 52.381 0.00 0.00 0.00 6.53
538 539 2.564771 CCTCTTCATCTATTTGCGGCA 58.435 47.619 0.00 0.00 0.00 5.69
539 540 2.547211 CCTCTTCATCTATTTGCGGCAG 59.453 50.000 1.67 0.00 0.00 4.85
540 541 1.942657 TCTTCATCTATTTGCGGCAGC 59.057 47.619 1.67 0.31 45.41 5.25
553 554 3.673484 GCAGCGGGCAATGTGTGT 61.673 61.111 0.00 0.00 43.97 3.72
554 555 2.562912 CAGCGGGCAATGTGTGTC 59.437 61.111 0.00 0.00 0.00 3.67
555 556 3.049674 AGCGGGCAATGTGTGTCG 61.050 61.111 0.00 0.00 29.99 4.35
556 557 4.759096 GCGGGCAATGTGTGTCGC 62.759 66.667 0.00 0.00 41.82 5.19
557 558 3.049674 CGGGCAATGTGTGTCGCT 61.050 61.111 0.00 0.00 29.99 4.93
558 559 2.562912 GGGCAATGTGTGTCGCTG 59.437 61.111 0.00 0.00 29.99 5.18
559 560 2.260869 GGGCAATGTGTGTCGCTGT 61.261 57.895 0.00 0.00 29.99 4.40
560 561 1.081906 GGCAATGTGTGTCGCTGTG 60.082 57.895 0.00 0.00 0.00 3.66
561 562 1.648720 GCAATGTGTGTCGCTGTGT 59.351 52.632 0.00 0.00 0.00 3.72
562 563 0.029300 GCAATGTGTGTCGCTGTGTT 59.971 50.000 0.00 0.00 0.00 3.32
563 564 1.745566 CAATGTGTGTCGCTGTGTTG 58.254 50.000 0.00 0.00 0.00 3.33
564 565 0.662619 AATGTGTGTCGCTGTGTTGG 59.337 50.000 0.00 0.00 0.00 3.77
565 566 1.785041 ATGTGTGTCGCTGTGTTGGC 61.785 55.000 0.00 0.00 0.00 4.52
566 567 2.899838 TGTGTCGCTGTGTTGGCC 60.900 61.111 0.00 0.00 0.00 5.36
567 568 3.660111 GTGTCGCTGTGTTGGCCC 61.660 66.667 0.00 0.00 0.00 5.80
568 569 4.182433 TGTCGCTGTGTTGGCCCA 62.182 61.111 0.00 0.00 0.00 5.36
569 570 2.672996 GTCGCTGTGTTGGCCCAT 60.673 61.111 0.00 0.00 0.00 4.00
570 571 2.359850 TCGCTGTGTTGGCCCATC 60.360 61.111 0.00 0.00 0.00 3.51
571 572 2.672651 CGCTGTGTTGGCCCATCA 60.673 61.111 0.00 0.00 0.00 3.07
572 573 2.964978 GCTGTGTTGGCCCATCAC 59.035 61.111 16.46 16.46 35.41 3.06
573 574 1.604593 GCTGTGTTGGCCCATCACT 60.605 57.895 22.11 0.00 35.74 3.41
574 575 1.870055 GCTGTGTTGGCCCATCACTG 61.870 60.000 22.11 21.62 35.74 3.66
575 576 0.250858 CTGTGTTGGCCCATCACTGA 60.251 55.000 22.11 5.80 36.09 3.41
576 577 0.405198 TGTGTTGGCCCATCACTGAT 59.595 50.000 22.11 0.00 35.74 2.90
577 578 1.632920 TGTGTTGGCCCATCACTGATA 59.367 47.619 22.11 3.07 35.74 2.15
578 579 2.292267 GTGTTGGCCCATCACTGATAG 58.708 52.381 16.11 0.00 33.04 2.08
579 580 1.212688 TGTTGGCCCATCACTGATAGG 59.787 52.381 0.00 0.00 0.00 2.57
580 581 1.212935 GTTGGCCCATCACTGATAGGT 59.787 52.381 0.00 0.00 0.00 3.08
581 582 1.131638 TGGCCCATCACTGATAGGTC 58.868 55.000 0.00 1.38 0.00 3.85
582 583 0.398318 GGCCCATCACTGATAGGTCC 59.602 60.000 5.51 3.98 0.00 4.46
583 584 1.131638 GCCCATCACTGATAGGTCCA 58.868 55.000 5.51 0.00 0.00 4.02
584 585 1.701847 GCCCATCACTGATAGGTCCAT 59.298 52.381 5.51 0.00 0.00 3.41
585 586 2.289945 GCCCATCACTGATAGGTCCATC 60.290 54.545 5.51 0.00 0.00 3.51
586 587 2.028658 CCCATCACTGATAGGTCCATCG 60.029 54.545 0.00 0.00 0.00 3.84
587 588 2.611473 CCATCACTGATAGGTCCATCGC 60.611 54.545 0.00 0.00 0.00 4.58
588 589 0.668535 TCACTGATAGGTCCATCGCG 59.331 55.000 0.00 0.00 0.00 5.87
589 590 0.668535 CACTGATAGGTCCATCGCGA 59.331 55.000 13.09 13.09 0.00 5.87
590 591 0.669077 ACTGATAGGTCCATCGCGAC 59.331 55.000 12.93 0.00 0.00 5.19
591 592 0.386100 CTGATAGGTCCATCGCGACG 60.386 60.000 12.93 1.41 33.30 5.12
596 597 1.138247 GGTCCATCGCGACGTACTT 59.862 57.895 12.93 0.00 33.30 2.24
603 604 2.447089 TCGCGACGTACTTCTACATG 57.553 50.000 3.71 0.00 0.00 3.21
608 609 4.110482 GCGACGTACTTCTACATGGAATT 58.890 43.478 0.00 0.00 0.00 2.17
758 759 4.508128 GCTTCACCGCCCGATCGA 62.508 66.667 18.66 0.00 0.00 3.59
835 841 0.813210 CCATGGCTTCTCTTCTCCGC 60.813 60.000 0.00 0.00 0.00 5.54
836 842 0.107993 CATGGCTTCTCTTCTCCGCA 60.108 55.000 0.00 0.00 0.00 5.69
837 843 0.177604 ATGGCTTCTCTTCTCCGCAG 59.822 55.000 0.00 0.00 0.00 5.18
1158 1169 4.639310 CCTAGCTTCAATGCTCAGAATTGT 59.361 41.667 5.19 0.00 42.97 2.71
1186 1197 3.458189 CAGAAATTCGCTACCTCGGAAT 58.542 45.455 0.00 0.00 0.00 3.01
1224 1249 3.394606 GGCCAGGTAGGAAAATCATAGGA 59.605 47.826 0.00 0.00 41.22 2.94
1226 1251 5.458215 GGCCAGGTAGGAAAATCATAGGAAT 60.458 44.000 0.00 0.00 41.22 3.01
1228 1253 6.881602 GCCAGGTAGGAAAATCATAGGAATAG 59.118 42.308 0.00 0.00 41.22 1.73
1257 1282 8.255111 AGTCATAGGAAATGAGATGACATGTA 57.745 34.615 14.37 0.00 46.94 2.29
1289 1314 9.932207 AATCATGTGAATAGAAAAGAAAATGCA 57.068 25.926 0.00 0.00 0.00 3.96
1302 1327 9.161684 GAAAAGAAAATGCATTTTGATTCACAC 57.838 29.630 35.57 20.72 39.86 3.82
1305 1330 5.927954 AAATGCATTTTGATTCACACCAC 57.072 34.783 18.99 0.00 0.00 4.16
1307 1332 3.979948 TGCATTTTGATTCACACCACAG 58.020 40.909 0.00 0.00 0.00 3.66
1364 1389 8.930846 ATTTTCCTATGAAATGTGGAGGATAG 57.069 34.615 0.00 0.00 40.08 2.08
1365 1390 6.439636 TTCCTATGAAATGTGGAGGATAGG 57.560 41.667 0.00 0.00 36.22 2.57
1366 1391 5.726560 TCCTATGAAATGTGGAGGATAGGA 58.273 41.667 0.00 0.00 39.29 2.94
1367 1392 6.150332 TCCTATGAAATGTGGAGGATAGGAA 58.850 40.000 0.00 0.00 38.86 3.36
1368 1393 6.794493 TCCTATGAAATGTGGAGGATAGGAAT 59.206 38.462 0.00 0.00 38.86 3.01
1369 1394 7.961431 TCCTATGAAATGTGGAGGATAGGAATA 59.039 37.037 0.00 0.00 38.86 1.75
1370 1395 8.605947 CCTATGAAATGTGGAGGATAGGAATAA 58.394 37.037 0.00 0.00 36.16 1.40
1377 1402 7.308450 TGTGGAGGATAGGAATAAGATTCTG 57.692 40.000 0.00 0.00 0.00 3.02
1404 1429 4.178956 ACAAACCAAAGGGCTCTAAAGA 57.821 40.909 0.00 0.00 37.90 2.52
1406 1431 5.147767 ACAAACCAAAGGGCTCTAAAGAAT 58.852 37.500 0.00 0.00 37.90 2.40
1530 1556 8.552034 CGATTCTAAAAATGGGTCTGATTACTC 58.448 37.037 0.00 0.00 0.00 2.59
1532 1558 7.265599 TCTAAAAATGGGTCTGATTACTCCA 57.734 36.000 0.00 0.00 0.00 3.86
1538 1564 2.505819 GGGTCTGATTACTCCACCACAT 59.494 50.000 0.00 0.00 0.00 3.21
1596 1628 7.591057 CGTTGGTGTATTTAAATCCATGCTATG 59.409 37.037 3.39 0.00 0.00 2.23
1692 1739 2.562298 TGGCCTCATTGTTGGAATTGAC 59.438 45.455 3.32 0.00 0.00 3.18
1748 1795 1.839994 TGTTCCTTGAGGATAGGCAGG 59.160 52.381 0.00 0.00 44.98 4.85
1749 1796 2.119495 GTTCCTTGAGGATAGGCAGGA 58.881 52.381 0.00 0.00 44.98 3.86
1806 1853 4.821805 GGTTTTGAGGAGAAATGACACAGA 59.178 41.667 0.00 0.00 0.00 3.41
1813 1860 5.732633 AGGAGAAATGACACAGATCTTGAG 58.267 41.667 10.61 0.00 0.00 3.02
1830 1877 3.116096 TGAGGTGTTAGAGGCTACCAT 57.884 47.619 6.20 0.00 35.66 3.55
1831 1878 2.766263 TGAGGTGTTAGAGGCTACCATG 59.234 50.000 6.20 0.00 35.66 3.66
1880 1927 3.845178 CAACCTGACGATGTAAGCTGTA 58.155 45.455 0.00 0.00 0.00 2.74
1897 1944 5.103000 AGCTGTACAAATCATGTCGTCTAC 58.897 41.667 0.00 0.00 42.70 2.59
1916 1963 6.625300 CGTCTACTTATCTACTGTTGCAAGGT 60.625 42.308 0.00 4.70 0.00 3.50
2068 2115 2.080693 GTATGTCATGGCCGTGTTTCA 58.919 47.619 24.24 20.08 0.00 2.69
2297 2348 3.589988 CTGCTCATGTTAGTCGTTTCCT 58.410 45.455 0.00 0.00 0.00 3.36
2322 2373 4.452455 CAGATTAAGGACGAACTGTTGCTT 59.548 41.667 0.00 0.00 0.00 3.91
2392 2443 6.031471 GTCTTCTCTCTCGAGGTATTTTCAC 58.969 44.000 13.56 0.00 37.86 3.18
2443 2494 5.163834 GCATTTTTGCACTAACCATGAATGG 60.164 40.000 7.82 7.82 43.21 3.16
2530 2581 7.929159 ACAAAATCAACCATTTGAAATTGGAC 58.071 30.769 10.21 0.00 45.01 4.02
2665 2723 3.341823 ACAGCCTCTTGCAGAAATGTAG 58.658 45.455 0.00 0.00 44.83 2.74
2697 2755 2.676342 CGTACAATAGACCCAAAGTGGC 59.324 50.000 0.00 0.00 35.79 5.01
2823 2910 3.129813 ACTGTTCGTGGCTCGTATAATCA 59.870 43.478 8.94 0.00 40.80 2.57
2893 4173 0.322546 GTCTGGGCGGAAAATGTCCT 60.323 55.000 0.00 0.00 45.36 3.85
2943 4234 3.545124 ATTTCGGGCTGCACGGACA 62.545 57.895 25.44 8.97 0.00 4.02
2972 4263 3.727258 TTGGACTGGCCCATCCCG 61.727 66.667 17.62 0.00 35.87 5.14
2989 4280 2.696759 CGACCCCACAAAATCCCGC 61.697 63.158 0.00 0.00 0.00 6.13
3012 4303 0.765135 TCTCCTCACCCGGACCAAAA 60.765 55.000 0.73 0.00 0.00 2.44
3044 4335 0.109342 CACTGCCCACTCCACTTTCT 59.891 55.000 0.00 0.00 0.00 2.52
3052 4343 0.318762 ACTCCACTTTCTGTCCGCTC 59.681 55.000 0.00 0.00 0.00 5.03
3085 4380 0.184933 CCTCCTCTCCGGTCATCTCT 59.815 60.000 0.00 0.00 0.00 3.10
3101 4396 0.543277 CTCTGGCATGGCTAGGAACA 59.457 55.000 21.08 0.00 37.73 3.18
3118 4413 1.763968 ACAGATCTGAATCCGGTCGA 58.236 50.000 29.27 0.00 31.78 4.20
3121 4416 2.556189 CAGATCTGAATCCGGTCGATCT 59.444 50.000 18.34 16.45 37.87 2.75
3313 4633 3.770040 TGTCCGCTCCATCACCGG 61.770 66.667 0.00 0.00 43.21 5.28
3451 4825 3.612247 GAGTGATGGTGTGCCCGCT 62.612 63.158 0.00 0.00 35.15 5.52
3545 4923 4.029809 CGGTCCGCCCTTTCCCTT 62.030 66.667 0.00 0.00 0.00 3.95
3836 5294 6.096987 CCTATGCTATGTCCGGACTATGTATT 59.903 42.308 33.39 15.90 0.00 1.89
4228 5760 6.601332 ACCTGAATATTGGTAATTGATCGGT 58.399 36.000 0.00 0.00 34.36 4.69
4275 5807 6.791887 TCTGACTGAATCTTTGATGTTCAC 57.208 37.500 0.00 0.00 0.00 3.18
4276 5808 5.406477 TCTGACTGAATCTTTGATGTTCACG 59.594 40.000 0.00 0.00 0.00 4.35
4412 5980 9.853555 CTGCCATGAATTAACTTGTGTTTATAA 57.146 29.630 0.00 0.00 37.59 0.98
4558 6129 9.901172 AAAGAAGAAAGTGAAGAAGTAGGTTTA 57.099 29.630 0.00 0.00 0.00 2.01
4868 6442 6.909550 TTGGTGGTGCTTATGTTAGATTTT 57.090 33.333 0.00 0.00 0.00 1.82
4869 6443 6.909550 TGGTGGTGCTTATGTTAGATTTTT 57.090 33.333 0.00 0.00 0.00 1.94
4930 6507 0.746659 GTTTGCAGCTTGTTCCAGGT 59.253 50.000 0.00 0.00 0.00 4.00
5011 6588 8.914213 ATGATGATCTTAGATTGATACTCCCT 57.086 34.615 0.00 0.00 0.00 4.20
5205 9460 5.957771 TGGTAAAGAGCTGGAATATGACT 57.042 39.130 0.00 0.00 0.00 3.41
5216 9471 3.834813 TGGAATATGACTGCTAGGCTAGG 59.165 47.826 22.40 9.69 0.00 3.02
5478 9745 3.326747 GGGCAGTTCAACACTAGTACTG 58.673 50.000 15.49 15.49 35.77 2.74
5533 9800 2.358737 CGCCGGAGCTGGTTCTTT 60.359 61.111 5.05 0.00 36.60 2.52
5672 9939 2.493278 CACAATTTTCTAGGCAGTGGGG 59.507 50.000 0.00 0.00 0.00 4.96
5673 9940 2.110011 ACAATTTTCTAGGCAGTGGGGT 59.890 45.455 0.00 0.00 0.00 4.95
5674 9941 2.493278 CAATTTTCTAGGCAGTGGGGTG 59.507 50.000 0.00 0.00 0.00 4.61
5675 9942 0.404040 TTTTCTAGGCAGTGGGGTGG 59.596 55.000 0.00 0.00 0.00 4.61
5676 9943 2.137177 TTTCTAGGCAGTGGGGTGGC 62.137 60.000 0.00 0.00 43.28 5.01
5792 10059 6.824704 TCTTCAGATTTCATGACATGTGCATA 59.175 34.615 14.98 0.00 0.00 3.14
5819 10096 3.937706 GGAGCACGAGACTAGTACTACAA 59.062 47.826 0.00 0.00 0.00 2.41
5820 10097 4.394300 GGAGCACGAGACTAGTACTACAAA 59.606 45.833 0.00 0.00 0.00 2.83
5821 10098 5.106396 GGAGCACGAGACTAGTACTACAAAA 60.106 44.000 0.00 0.00 0.00 2.44
5822 10099 6.323203 AGCACGAGACTAGTACTACAAAAA 57.677 37.500 0.00 0.00 0.00 1.94
5918 10199 7.489113 GGATACCAGTAAATTTTGCACATCAAG 59.511 37.037 0.00 0.00 35.84 3.02
5930 10211 2.161211 GCACATCAAGGCTGAAAGAGAC 59.839 50.000 0.00 0.00 34.49 3.36
5994 10275 4.081365 GCTGGGGAGGAGCTATTATCTTAC 60.081 50.000 0.00 0.00 33.37 2.34
5995 10276 5.337788 CTGGGGAGGAGCTATTATCTTACT 58.662 45.833 0.00 0.00 0.00 2.24
5996 10277 5.334421 TGGGGAGGAGCTATTATCTTACTC 58.666 45.833 0.00 0.00 0.00 2.59
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 5.593909 CCATACATAAAGAACTTGGCATGGA 59.406 40.000 5.31 0.00 32.80 3.41
2 3 5.593909 TCCATACATAAAGAACTTGGCATGG 59.406 40.000 5.31 0.00 32.55 3.66
3 4 6.095300 TGTCCATACATAAAGAACTTGGCATG 59.905 38.462 0.00 0.00 0.00 4.06
4 5 6.186957 TGTCCATACATAAAGAACTTGGCAT 58.813 36.000 0.00 0.00 0.00 4.40
5 6 5.565509 TGTCCATACATAAAGAACTTGGCA 58.434 37.500 0.00 0.00 0.00 4.92
6 7 6.509418 TTGTCCATACATAAAGAACTTGGC 57.491 37.500 0.00 0.00 34.97 4.52
7 8 8.190784 GGAATTGTCCATACATAAAGAACTTGG 58.809 37.037 0.00 0.00 44.26 3.61
18 19 8.245487 ACCAATTTGGAGGAATTGTCCATACAT 61.245 37.037 22.19 0.00 43.78 2.29
19 20 6.979720 ACCAATTTGGAGGAATTGTCCATACA 60.980 38.462 22.19 0.00 43.78 2.29
20 21 5.422012 ACCAATTTGGAGGAATTGTCCATAC 59.578 40.000 22.19 0.00 43.78 2.39
21 22 5.588845 ACCAATTTGGAGGAATTGTCCATA 58.411 37.500 22.19 3.66 43.78 2.74
22 23 4.428570 ACCAATTTGGAGGAATTGTCCAT 58.571 39.130 22.19 0.00 43.78 3.41
23 24 3.855668 ACCAATTTGGAGGAATTGTCCA 58.144 40.909 22.19 2.49 43.29 4.02
24 25 4.568956 CAACCAATTTGGAGGAATTGTCC 58.431 43.478 22.19 0.00 42.63 4.02
25 26 3.996363 GCAACCAATTTGGAGGAATTGTC 59.004 43.478 22.19 8.00 42.63 3.18
26 27 3.244526 GGCAACCAATTTGGAGGAATTGT 60.245 43.478 22.19 0.00 42.63 2.71
27 28 3.244491 TGGCAACCAATTTGGAGGAATTG 60.244 43.478 22.19 15.18 40.96 2.32
28 29 2.978278 TGGCAACCAATTTGGAGGAATT 59.022 40.909 22.19 2.47 40.96 2.17
29 30 2.618794 TGGCAACCAATTTGGAGGAAT 58.381 42.857 22.19 0.00 40.96 3.01
30 31 2.094100 TGGCAACCAATTTGGAGGAA 57.906 45.000 22.19 0.98 40.96 3.36
31 32 2.094100 TTGGCAACCAATTTGGAGGA 57.906 45.000 22.19 0.00 40.96 3.71
32 33 2.493035 GTTTGGCAACCAATTTGGAGG 58.507 47.619 22.19 13.40 43.55 4.30
33 34 2.134346 CGTTTGGCAACCAATTTGGAG 58.866 47.619 22.19 14.04 43.55 3.86
34 35 1.808133 GCGTTTGGCAACCAATTTGGA 60.808 47.619 22.19 0.00 43.55 3.53
35 36 0.585838 GCGTTTGGCAACCAATTTGG 59.414 50.000 14.02 14.02 43.55 3.28
36 37 1.580815 AGCGTTTGGCAACCAATTTG 58.419 45.000 0.00 0.00 43.55 2.32
37 38 2.323968 AAGCGTTTGGCAACCAATTT 57.676 40.000 0.00 0.00 43.55 1.82
38 39 2.323968 AAAGCGTTTGGCAACCAATT 57.676 40.000 0.00 0.00 43.55 2.32
39 40 3.127589 GTTAAAGCGTTTGGCAACCAAT 58.872 40.909 0.00 0.00 43.55 3.16
46 47 3.730963 GCTAGGATGTTAAAGCGTTTGGC 60.731 47.826 0.00 0.00 44.05 4.52
47 48 3.438781 TGCTAGGATGTTAAAGCGTTTGG 59.561 43.478 0.00 0.00 37.80 3.28
48 49 4.403453 GTGCTAGGATGTTAAAGCGTTTG 58.597 43.478 0.00 0.00 37.80 2.93
49 50 3.124636 CGTGCTAGGATGTTAAAGCGTTT 59.875 43.478 0.00 0.00 37.80 3.60
50 51 2.671396 CGTGCTAGGATGTTAAAGCGTT 59.329 45.455 0.00 0.00 37.80 4.84
51 52 2.268298 CGTGCTAGGATGTTAAAGCGT 58.732 47.619 0.00 0.00 37.80 5.07
52 53 1.593006 CCGTGCTAGGATGTTAAAGCG 59.407 52.381 2.53 0.00 37.80 4.68
53 54 2.629051 ACCGTGCTAGGATGTTAAAGC 58.371 47.619 2.53 0.00 35.51 3.51
54 55 4.369182 CCTACCGTGCTAGGATGTTAAAG 58.631 47.826 2.53 0.00 36.10 1.85
55 56 3.431207 GCCTACCGTGCTAGGATGTTAAA 60.431 47.826 2.53 0.00 36.10 1.52
56 57 2.101917 GCCTACCGTGCTAGGATGTTAA 59.898 50.000 2.53 0.00 36.10 2.01
57 58 1.684983 GCCTACCGTGCTAGGATGTTA 59.315 52.381 2.53 0.00 36.10 2.41
58 59 0.464452 GCCTACCGTGCTAGGATGTT 59.536 55.000 2.53 0.00 36.10 2.71
59 60 0.397254 AGCCTACCGTGCTAGGATGT 60.397 55.000 2.53 0.00 37.28 3.06
60 61 0.753262 AAGCCTACCGTGCTAGGATG 59.247 55.000 5.06 0.00 38.34 3.51
61 62 0.753262 CAAGCCTACCGTGCTAGGAT 59.247 55.000 5.06 0.00 38.34 3.24
62 63 1.956629 GCAAGCCTACCGTGCTAGGA 61.957 60.000 5.06 0.00 44.19 2.94
63 64 1.521681 GCAAGCCTACCGTGCTAGG 60.522 63.158 0.00 0.00 44.19 3.02
64 65 4.110493 GCAAGCCTACCGTGCTAG 57.890 61.111 0.00 0.00 44.19 3.42
68 69 1.421410 GATCGTGCAAGCCTACCGTG 61.421 60.000 0.00 0.00 0.00 4.94
69 70 1.153628 GATCGTGCAAGCCTACCGT 60.154 57.895 0.00 0.00 0.00 4.83
70 71 0.460284 AAGATCGTGCAAGCCTACCG 60.460 55.000 0.00 0.00 0.00 4.02
71 72 1.134670 AGAAGATCGTGCAAGCCTACC 60.135 52.381 0.00 0.00 0.00 3.18
72 73 1.929836 CAGAAGATCGTGCAAGCCTAC 59.070 52.381 0.00 0.00 0.00 3.18
73 74 1.740380 GCAGAAGATCGTGCAAGCCTA 60.740 52.381 11.50 0.00 39.62 3.93
74 75 1.023513 GCAGAAGATCGTGCAAGCCT 61.024 55.000 11.50 0.00 39.62 4.58
75 76 1.427020 GCAGAAGATCGTGCAAGCC 59.573 57.895 11.50 0.00 39.62 4.35
76 77 1.059994 CGCAGAAGATCGTGCAAGC 59.940 57.895 15.26 3.92 39.83 4.01
77 78 0.792640 AACGCAGAAGATCGTGCAAG 59.207 50.000 15.26 0.00 39.83 4.01
78 79 1.069973 CAAACGCAGAAGATCGTGCAA 60.070 47.619 15.26 0.00 39.83 4.08
79 80 0.512518 CAAACGCAGAAGATCGTGCA 59.487 50.000 15.26 0.00 39.83 4.57
80 81 0.512952 ACAAACGCAGAAGATCGTGC 59.487 50.000 7.47 7.47 39.06 5.34
81 82 2.220824 TCAACAAACGCAGAAGATCGTG 59.779 45.455 0.00 0.00 39.06 4.35
82 83 2.479837 TCAACAAACGCAGAAGATCGT 58.520 42.857 0.00 0.00 41.06 3.73
83 84 3.729526 ATCAACAAACGCAGAAGATCG 57.270 42.857 0.00 0.00 0.00 3.69
84 85 5.343325 GGAAAATCAACAAACGCAGAAGATC 59.657 40.000 0.00 0.00 0.00 2.75
85 86 5.222631 GGAAAATCAACAAACGCAGAAGAT 58.777 37.500 0.00 0.00 0.00 2.40
86 87 4.606961 GGAAAATCAACAAACGCAGAAGA 58.393 39.130 0.00 0.00 0.00 2.87
87 88 3.421888 CGGAAAATCAACAAACGCAGAAG 59.578 43.478 0.00 0.00 0.00 2.85
88 89 3.065510 TCGGAAAATCAACAAACGCAGAA 59.934 39.130 0.00 0.00 0.00 3.02
89 90 2.614520 TCGGAAAATCAACAAACGCAGA 59.385 40.909 0.00 0.00 0.00 4.26
90 91 2.719046 GTCGGAAAATCAACAAACGCAG 59.281 45.455 0.00 0.00 0.00 5.18
91 92 2.097629 TGTCGGAAAATCAACAAACGCA 59.902 40.909 0.00 0.00 0.00 5.24
92 93 2.722071 TGTCGGAAAATCAACAAACGC 58.278 42.857 0.00 0.00 0.00 4.84
93 94 4.783242 AGATGTCGGAAAATCAACAAACG 58.217 39.130 5.13 0.00 0.00 3.60
94 95 6.072673 ACCTAGATGTCGGAAAATCAACAAAC 60.073 38.462 0.00 0.00 0.00 2.93
95 96 6.001460 ACCTAGATGTCGGAAAATCAACAAA 58.999 36.000 0.00 0.00 0.00 2.83
96 97 5.411361 CACCTAGATGTCGGAAAATCAACAA 59.589 40.000 0.00 0.00 0.00 2.83
97 98 4.935205 CACCTAGATGTCGGAAAATCAACA 59.065 41.667 0.00 0.00 0.00 3.33
98 99 4.935808 ACACCTAGATGTCGGAAAATCAAC 59.064 41.667 0.00 0.00 0.00 3.18
99 100 4.935205 CACACCTAGATGTCGGAAAATCAA 59.065 41.667 0.00 0.00 0.00 2.57
100 101 4.503910 CACACCTAGATGTCGGAAAATCA 58.496 43.478 0.00 0.00 0.00 2.57
101 102 3.309954 GCACACCTAGATGTCGGAAAATC 59.690 47.826 0.00 0.00 0.00 2.17
102 103 3.270877 GCACACCTAGATGTCGGAAAAT 58.729 45.455 0.00 0.00 0.00 1.82
103 104 2.037902 TGCACACCTAGATGTCGGAAAA 59.962 45.455 0.00 0.00 0.00 2.29
104 105 1.621317 TGCACACCTAGATGTCGGAAA 59.379 47.619 0.00 0.00 0.00 3.13
105 106 1.204704 CTGCACACCTAGATGTCGGAA 59.795 52.381 0.00 0.00 0.00 4.30
106 107 0.817654 CTGCACACCTAGATGTCGGA 59.182 55.000 0.00 0.00 0.00 4.55
107 108 0.807667 GCTGCACACCTAGATGTCGG 60.808 60.000 0.00 0.00 0.00 4.79
108 109 0.174389 AGCTGCACACCTAGATGTCG 59.826 55.000 1.02 0.00 0.00 4.35
109 110 1.066573 ACAGCTGCACACCTAGATGTC 60.067 52.381 15.27 0.00 39.09 3.06
110 111 0.979665 ACAGCTGCACACCTAGATGT 59.020 50.000 15.27 0.00 38.59 3.06
111 112 1.736126 CAACAGCTGCACACCTAGATG 59.264 52.381 15.27 0.00 36.46 2.90
112 113 1.349026 ACAACAGCTGCACACCTAGAT 59.651 47.619 15.27 0.00 0.00 1.98
113 114 0.758734 ACAACAGCTGCACACCTAGA 59.241 50.000 15.27 0.00 0.00 2.43
114 115 0.870393 CACAACAGCTGCACACCTAG 59.130 55.000 15.27 0.00 0.00 3.02
115 116 0.180171 ACACAACAGCTGCACACCTA 59.820 50.000 15.27 0.00 0.00 3.08
116 117 1.077501 ACACAACAGCTGCACACCT 60.078 52.632 15.27 0.00 0.00 4.00
117 118 1.064621 CACACAACAGCTGCACACC 59.935 57.895 15.27 0.00 0.00 4.16
118 119 0.248215 GACACACAACAGCTGCACAC 60.248 55.000 15.27 0.00 0.00 3.82
119 120 1.375853 GGACACACAACAGCTGCACA 61.376 55.000 15.27 0.00 0.00 4.57
120 121 1.356624 GGACACACAACAGCTGCAC 59.643 57.895 15.27 0.00 0.00 4.57
121 122 0.466007 ATGGACACACAACAGCTGCA 60.466 50.000 15.27 0.00 0.00 4.41
122 123 0.239347 GATGGACACACAACAGCTGC 59.761 55.000 15.27 0.00 0.00 5.25
123 124 0.514255 CGATGGACACACAACAGCTG 59.486 55.000 13.48 13.48 0.00 4.24
124 125 1.230635 GCGATGGACACACAACAGCT 61.231 55.000 0.00 0.00 0.00 4.24
125 126 1.207593 GCGATGGACACACAACAGC 59.792 57.895 0.00 0.00 0.00 4.40
126 127 0.603707 AGGCGATGGACACACAACAG 60.604 55.000 0.00 0.00 0.00 3.16
127 128 0.602638 GAGGCGATGGACACACAACA 60.603 55.000 0.00 0.00 0.00 3.33
128 129 1.298859 GGAGGCGATGGACACACAAC 61.299 60.000 0.00 0.00 0.00 3.32
129 130 1.003839 GGAGGCGATGGACACACAA 60.004 57.895 0.00 0.00 0.00 3.33
130 131 2.662596 GGAGGCGATGGACACACA 59.337 61.111 0.00 0.00 0.00 3.72
131 132 2.509336 CGGAGGCGATGGACACAC 60.509 66.667 0.00 0.00 0.00 3.82
132 133 3.770040 CCGGAGGCGATGGACACA 61.770 66.667 0.00 0.00 46.14 3.72
161 162 2.615447 CCGATGAACATGATCCAAGTGG 59.385 50.000 0.00 0.00 0.00 4.00
162 163 3.064408 CACCGATGAACATGATCCAAGTG 59.936 47.826 0.00 0.00 0.00 3.16
163 164 3.055167 TCACCGATGAACATGATCCAAGT 60.055 43.478 0.00 0.00 0.00 3.16
164 165 3.310774 GTCACCGATGAACATGATCCAAG 59.689 47.826 0.00 0.00 36.31 3.61
165 166 3.055167 AGTCACCGATGAACATGATCCAA 60.055 43.478 0.00 0.00 36.31 3.53
166 167 2.501316 AGTCACCGATGAACATGATCCA 59.499 45.455 0.00 0.00 36.31 3.41
167 168 3.126831 GAGTCACCGATGAACATGATCC 58.873 50.000 0.00 0.00 36.31 3.36
168 169 3.126831 GGAGTCACCGATGAACATGATC 58.873 50.000 0.00 0.00 36.31 2.92
169 170 2.768527 AGGAGTCACCGATGAACATGAT 59.231 45.455 0.00 0.00 44.74 2.45
170 171 2.166459 GAGGAGTCACCGATGAACATGA 59.834 50.000 0.00 0.00 44.74 3.07
171 172 2.544685 GAGGAGTCACCGATGAACATG 58.455 52.381 0.00 0.00 44.74 3.21
172 173 1.482593 GGAGGAGTCACCGATGAACAT 59.517 52.381 0.00 0.00 44.74 2.71
173 174 0.895530 GGAGGAGTCACCGATGAACA 59.104 55.000 0.00 0.00 44.74 3.18
174 175 1.187087 AGGAGGAGTCACCGATGAAC 58.813 55.000 0.00 0.00 44.74 3.18
175 176 1.938585 AAGGAGGAGTCACCGATGAA 58.061 50.000 0.00 0.00 44.74 2.57
176 177 2.820728 TAAGGAGGAGTCACCGATGA 57.179 50.000 0.00 0.00 44.74 2.92
177 178 2.030717 CGATAAGGAGGAGTCACCGATG 60.031 54.545 0.00 0.00 44.74 3.84
178 179 2.231529 CGATAAGGAGGAGTCACCGAT 58.768 52.381 0.00 0.00 44.74 4.18
179 180 1.676746 CGATAAGGAGGAGTCACCGA 58.323 55.000 0.00 0.00 44.74 4.69
180 181 0.669077 CCGATAAGGAGGAGTCACCG 59.331 60.000 0.00 0.00 45.00 4.94
181 182 0.389757 GCCGATAAGGAGGAGTCACC 59.610 60.000 0.00 0.00 45.00 4.02
182 183 0.030908 CGCCGATAAGGAGGAGTCAC 59.969 60.000 0.00 0.00 45.00 3.67
183 184 1.735376 GCGCCGATAAGGAGGAGTCA 61.735 60.000 0.00 0.00 45.00 3.41
184 185 1.007154 GCGCCGATAAGGAGGAGTC 60.007 63.158 0.00 0.00 45.00 3.36
185 186 2.499827 GGCGCCGATAAGGAGGAGT 61.500 63.158 12.58 0.00 45.00 3.85
186 187 2.340443 GGCGCCGATAAGGAGGAG 59.660 66.667 12.58 0.00 45.00 3.69
187 188 3.231736 GGGCGCCGATAAGGAGGA 61.232 66.667 22.54 0.00 45.00 3.71
198 199 4.778143 ATGTCTCAACCGGGCGCC 62.778 66.667 21.18 21.18 0.00 6.53
199 200 2.253414 GAAATGTCTCAACCGGGCGC 62.253 60.000 6.32 0.00 0.00 6.53
200 201 0.953471 TGAAATGTCTCAACCGGGCG 60.953 55.000 6.32 0.00 0.00 6.13
201 202 1.243902 TTGAAATGTCTCAACCGGGC 58.756 50.000 6.32 0.00 30.31 6.13
202 203 4.332819 GTCTATTGAAATGTCTCAACCGGG 59.667 45.833 6.32 0.00 38.12 5.73
203 204 4.935205 TGTCTATTGAAATGTCTCAACCGG 59.065 41.667 0.00 0.00 38.12 5.28
204 205 5.869344 TCTGTCTATTGAAATGTCTCAACCG 59.131 40.000 0.00 0.00 38.12 4.44
205 206 7.099764 TCTCTGTCTATTGAAATGTCTCAACC 58.900 38.462 0.00 0.00 38.12 3.77
206 207 7.277539 CCTCTCTGTCTATTGAAATGTCTCAAC 59.722 40.741 0.00 0.00 38.12 3.18
207 208 7.326454 CCTCTCTGTCTATTGAAATGTCTCAA 58.674 38.462 0.00 0.00 39.56 3.02
208 209 6.629068 GCCTCTCTGTCTATTGAAATGTCTCA 60.629 42.308 0.00 0.00 0.00 3.27
209 210 5.752955 GCCTCTCTGTCTATTGAAATGTCTC 59.247 44.000 0.00 0.00 0.00 3.36
210 211 5.188555 TGCCTCTCTGTCTATTGAAATGTCT 59.811 40.000 0.00 0.00 0.00 3.41
211 212 5.293079 GTGCCTCTCTGTCTATTGAAATGTC 59.707 44.000 0.00 0.00 0.00 3.06
212 213 5.181748 GTGCCTCTCTGTCTATTGAAATGT 58.818 41.667 0.00 0.00 0.00 2.71
213 214 4.574013 GGTGCCTCTCTGTCTATTGAAATG 59.426 45.833 0.00 0.00 0.00 2.32
214 215 4.681781 CGGTGCCTCTCTGTCTATTGAAAT 60.682 45.833 0.00 0.00 0.00 2.17
215 216 3.368427 CGGTGCCTCTCTGTCTATTGAAA 60.368 47.826 0.00 0.00 0.00 2.69
216 217 2.166459 CGGTGCCTCTCTGTCTATTGAA 59.834 50.000 0.00 0.00 0.00 2.69
217 218 1.751351 CGGTGCCTCTCTGTCTATTGA 59.249 52.381 0.00 0.00 0.00 2.57
218 219 1.751351 TCGGTGCCTCTCTGTCTATTG 59.249 52.381 0.00 0.00 0.00 1.90
219 220 1.751924 GTCGGTGCCTCTCTGTCTATT 59.248 52.381 0.00 0.00 0.00 1.73
220 221 1.394618 GTCGGTGCCTCTCTGTCTAT 58.605 55.000 0.00 0.00 0.00 1.98
221 222 1.025113 CGTCGGTGCCTCTCTGTCTA 61.025 60.000 0.00 0.00 0.00 2.59
222 223 2.336478 CGTCGGTGCCTCTCTGTCT 61.336 63.158 0.00 0.00 0.00 3.41
223 224 2.179517 CGTCGGTGCCTCTCTGTC 59.820 66.667 0.00 0.00 0.00 3.51
224 225 3.374402 CCGTCGGTGCCTCTCTGT 61.374 66.667 2.08 0.00 0.00 3.41
225 226 4.135153 CCCGTCGGTGCCTCTCTG 62.135 72.222 11.06 0.00 0.00 3.35
233 234 2.819595 CTTCCATGCCCGTCGGTG 60.820 66.667 11.06 1.65 0.00 4.94
234 235 4.778143 GCTTCCATGCCCGTCGGT 62.778 66.667 11.06 0.00 0.00 4.69
242 243 1.027357 AATGATGTCGGCTTCCATGC 58.973 50.000 0.00 0.00 0.00 4.06
243 244 2.289820 CTCAATGATGTCGGCTTCCATG 59.710 50.000 0.00 0.19 0.00 3.66
244 245 2.569059 CTCAATGATGTCGGCTTCCAT 58.431 47.619 0.00 0.00 0.00 3.41
245 246 2.013563 GCTCAATGATGTCGGCTTCCA 61.014 52.381 0.00 0.00 0.00 3.53
246 247 0.659957 GCTCAATGATGTCGGCTTCC 59.340 55.000 0.00 0.00 0.00 3.46
247 248 0.302890 CGCTCAATGATGTCGGCTTC 59.697 55.000 0.00 0.00 0.00 3.86
248 249 1.091771 CCGCTCAATGATGTCGGCTT 61.092 55.000 5.96 0.00 37.12 4.35
249 250 1.522355 CCGCTCAATGATGTCGGCT 60.522 57.895 5.96 0.00 37.12 5.52
250 251 1.521457 TCCGCTCAATGATGTCGGC 60.521 57.895 11.90 0.00 40.72 5.54
251 252 0.460109 TGTCCGCTCAATGATGTCGG 60.460 55.000 10.90 10.90 41.56 4.79
252 253 1.325640 CTTGTCCGCTCAATGATGTCG 59.674 52.381 0.00 0.00 0.00 4.35
253 254 1.063174 GCTTGTCCGCTCAATGATGTC 59.937 52.381 0.00 0.00 0.00 3.06
254 255 1.089920 GCTTGTCCGCTCAATGATGT 58.910 50.000 0.00 0.00 0.00 3.06
255 256 1.089112 TGCTTGTCCGCTCAATGATG 58.911 50.000 0.00 0.00 0.00 3.07
256 257 1.089920 GTGCTTGTCCGCTCAATGAT 58.910 50.000 0.00 0.00 0.00 2.45
257 258 0.955428 GGTGCTTGTCCGCTCAATGA 60.955 55.000 0.00 0.00 0.00 2.57
258 259 1.503542 GGTGCTTGTCCGCTCAATG 59.496 57.895 0.00 0.00 0.00 2.82
259 260 2.034879 CGGTGCTTGTCCGCTCAAT 61.035 57.895 0.00 0.00 41.48 2.57
260 261 2.664851 CGGTGCTTGTCCGCTCAA 60.665 61.111 0.00 0.00 41.48 3.02
261 262 3.611674 TCGGTGCTTGTCCGCTCA 61.612 61.111 0.00 0.00 46.49 4.26
262 263 3.112709 GTCGGTGCTTGTCCGCTC 61.113 66.667 0.00 0.00 46.49 5.03
266 267 2.022129 CAGTCGTCGGTGCTTGTCC 61.022 63.158 0.00 0.00 0.00 4.02
267 268 2.658707 GCAGTCGTCGGTGCTTGTC 61.659 63.158 11.80 0.00 36.71 3.18
268 269 2.661866 GCAGTCGTCGGTGCTTGT 60.662 61.111 11.80 0.00 36.71 3.16
269 270 3.767230 CGCAGTCGTCGGTGCTTG 61.767 66.667 15.54 1.53 37.55 4.01
270 271 3.973516 TCGCAGTCGTCGGTGCTT 61.974 61.111 15.54 0.00 37.55 3.91
271 272 4.702081 GTCGCAGTCGTCGGTGCT 62.702 66.667 15.54 0.22 37.55 4.40
272 273 4.702081 AGTCGCAGTCGTCGGTGC 62.702 66.667 9.66 9.66 36.96 5.01
273 274 2.502080 GAGTCGCAGTCGTCGGTG 60.502 66.667 0.00 0.00 36.96 4.94
274 275 3.735029 GGAGTCGCAGTCGTCGGT 61.735 66.667 0.00 0.00 36.96 4.69
275 276 4.813526 CGGAGTCGCAGTCGTCGG 62.814 72.222 0.00 0.00 36.96 4.79
276 277 4.086178 ACGGAGTCGCAGTCGTCG 62.086 66.667 0.00 0.00 29.74 5.12
277 278 2.453773 TTCACGGAGTCGCAGTCGTC 62.454 60.000 0.00 0.00 41.61 4.20
278 279 2.459421 CTTCACGGAGTCGCAGTCGT 62.459 60.000 0.00 0.00 41.61 4.34
279 280 1.797933 CTTCACGGAGTCGCAGTCG 60.798 63.158 0.00 0.00 41.61 4.18
280 281 1.444553 CCTTCACGGAGTCGCAGTC 60.445 63.158 0.00 0.00 41.61 3.51
281 282 2.201022 ACCTTCACGGAGTCGCAGT 61.201 57.895 0.00 0.00 41.61 4.40
282 283 1.734477 CACCTTCACGGAGTCGCAG 60.734 63.158 0.00 0.00 41.61 5.18
283 284 2.023414 AACACCTTCACGGAGTCGCA 62.023 55.000 0.00 0.00 41.61 5.10
284 285 1.282930 GAACACCTTCACGGAGTCGC 61.283 60.000 0.00 0.00 41.61 5.19
285 286 0.314302 AGAACACCTTCACGGAGTCG 59.686 55.000 0.00 0.00 41.61 4.18
286 287 1.336980 GGAGAACACCTTCACGGAGTC 60.337 57.143 0.00 0.00 41.61 3.36
287 288 4.177120 GTGGAGAACACCTTCACGGAGT 62.177 54.545 0.00 0.00 41.26 3.85
288 289 0.679505 TGGAGAACACCTTCACGGAG 59.320 55.000 0.00 0.00 36.31 4.63
289 290 0.391597 GTGGAGAACACCTTCACGGA 59.608 55.000 0.00 0.00 41.26 4.69
290 291 2.914379 GTGGAGAACACCTTCACGG 58.086 57.895 0.00 0.00 41.26 4.94
298 299 1.597663 CCTCAACAACGTGGAGAACAC 59.402 52.381 0.00 0.00 46.78 3.32
299 300 1.208535 ACCTCAACAACGTGGAGAACA 59.791 47.619 0.00 0.00 35.75 3.18
300 301 1.865340 GACCTCAACAACGTGGAGAAC 59.135 52.381 0.00 0.00 35.75 3.01
301 302 1.537348 CGACCTCAACAACGTGGAGAA 60.537 52.381 0.00 0.00 35.75 2.87
302 303 0.031585 CGACCTCAACAACGTGGAGA 59.968 55.000 0.00 0.00 35.75 3.71
303 304 0.031585 TCGACCTCAACAACGTGGAG 59.968 55.000 0.00 0.00 33.64 3.86
304 305 0.249155 GTCGACCTCAACAACGTGGA 60.249 55.000 3.51 0.00 0.00 4.02
305 306 1.545614 CGTCGACCTCAACAACGTGG 61.546 60.000 10.58 0.00 0.00 4.94
306 307 0.593008 TCGTCGACCTCAACAACGTG 60.593 55.000 10.58 0.00 35.04 4.49
307 308 0.313043 ATCGTCGACCTCAACAACGT 59.687 50.000 10.58 0.00 35.04 3.99
308 309 0.708370 CATCGTCGACCTCAACAACG 59.292 55.000 10.58 0.00 34.80 4.10
309 310 0.438830 GCATCGTCGACCTCAACAAC 59.561 55.000 10.58 0.00 0.00 3.32
310 311 0.032815 TGCATCGTCGACCTCAACAA 59.967 50.000 10.58 0.00 0.00 2.83
311 312 0.666274 GTGCATCGTCGACCTCAACA 60.666 55.000 10.58 0.00 0.00 3.33
312 313 1.674611 CGTGCATCGTCGACCTCAAC 61.675 60.000 10.58 1.65 34.52 3.18
313 314 1.443702 CGTGCATCGTCGACCTCAA 60.444 57.895 10.58 0.00 34.52 3.02
314 315 2.178273 CGTGCATCGTCGACCTCA 59.822 61.111 10.58 0.00 34.52 3.86
315 316 2.579787 CCGTGCATCGTCGACCTC 60.580 66.667 10.58 0.00 37.94 3.85
316 317 4.796231 GCCGTGCATCGTCGACCT 62.796 66.667 10.58 0.00 37.94 3.85
326 327 3.442167 GCCATCACATGCCGTGCA 61.442 61.111 1.01 1.01 45.92 4.57
327 328 4.197498 GGCCATCACATGCCGTGC 62.197 66.667 0.00 0.00 45.92 5.34
333 334 3.576356 GTCGCCGGCCATCACATG 61.576 66.667 23.46 3.72 0.00 3.21
336 337 4.891727 ATCGTCGCCGGCCATCAC 62.892 66.667 23.46 11.59 33.95 3.06
337 338 4.889856 CATCGTCGCCGGCCATCA 62.890 66.667 23.46 2.49 33.95 3.07
344 345 4.429212 TGTCCACCATCGTCGCCG 62.429 66.667 0.00 0.00 0.00 6.46
345 346 2.813908 GTGTCCACCATCGTCGCC 60.814 66.667 0.00 0.00 0.00 5.54
346 347 3.179265 CGTGTCCACCATCGTCGC 61.179 66.667 0.00 0.00 0.00 5.19
347 348 2.506217 CCGTGTCCACCATCGTCG 60.506 66.667 0.00 0.00 0.00 5.12
348 349 1.445582 GTCCGTGTCCACCATCGTC 60.446 63.158 0.00 0.00 0.00 4.20
349 350 1.906824 AGTCCGTGTCCACCATCGT 60.907 57.895 0.00 0.00 0.00 3.73
350 351 1.446099 CAGTCCGTGTCCACCATCG 60.446 63.158 0.00 0.00 0.00 3.84
351 352 1.741770 GCAGTCCGTGTCCACCATC 60.742 63.158 0.00 0.00 0.00 3.51
352 353 0.902984 TAGCAGTCCGTGTCCACCAT 60.903 55.000 0.00 0.00 0.00 3.55
353 354 0.902984 ATAGCAGTCCGTGTCCACCA 60.903 55.000 0.00 0.00 0.00 4.17
354 355 0.249398 AATAGCAGTCCGTGTCCACC 59.751 55.000 0.00 0.00 0.00 4.61
355 356 1.359848 CAATAGCAGTCCGTGTCCAC 58.640 55.000 0.00 0.00 0.00 4.02
356 357 0.391130 GCAATAGCAGTCCGTGTCCA 60.391 55.000 0.00 0.00 41.58 4.02
357 358 0.108138 AGCAATAGCAGTCCGTGTCC 60.108 55.000 0.00 0.00 45.49 4.02
358 359 1.002366 CAGCAATAGCAGTCCGTGTC 58.998 55.000 0.00 0.00 45.49 3.67
359 360 0.608130 TCAGCAATAGCAGTCCGTGT 59.392 50.000 0.00 0.00 45.49 4.49
360 361 1.863454 GATCAGCAATAGCAGTCCGTG 59.137 52.381 0.00 0.00 45.49 4.94
361 362 1.536922 CGATCAGCAATAGCAGTCCGT 60.537 52.381 0.00 0.00 45.49 4.69
362 363 1.135046 CGATCAGCAATAGCAGTCCG 58.865 55.000 0.00 0.00 45.49 4.79
363 364 2.402305 CTCGATCAGCAATAGCAGTCC 58.598 52.381 0.00 0.00 45.49 3.85
375 376 3.842923 ACCTGGCCGCTCGATCAG 61.843 66.667 0.00 0.00 0.00 2.90
376 377 4.147449 CACCTGGCCGCTCGATCA 62.147 66.667 0.00 0.00 0.00 2.92
377 378 4.899239 CCACCTGGCCGCTCGATC 62.899 72.222 0.00 0.00 0.00 3.69
387 388 1.134401 CCACACTACTATGCCACCTGG 60.134 57.143 0.00 0.00 38.53 4.45
388 389 1.743772 GCCACACTACTATGCCACCTG 60.744 57.143 0.00 0.00 0.00 4.00
389 390 0.541863 GCCACACTACTATGCCACCT 59.458 55.000 0.00 0.00 0.00 4.00
390 391 0.810031 CGCCACACTACTATGCCACC 60.810 60.000 0.00 0.00 0.00 4.61
391 392 0.810031 CCGCCACACTACTATGCCAC 60.810 60.000 0.00 0.00 0.00 5.01
392 393 0.973496 TCCGCCACACTACTATGCCA 60.973 55.000 0.00 0.00 0.00 4.92
393 394 0.393077 ATCCGCCACACTACTATGCC 59.607 55.000 0.00 0.00 0.00 4.40
394 395 1.502231 CATCCGCCACACTACTATGC 58.498 55.000 0.00 0.00 0.00 3.14
395 396 1.502231 GCATCCGCCACACTACTATG 58.498 55.000 0.00 0.00 0.00 2.23
396 397 0.032130 CGCATCCGCCACACTACTAT 59.968 55.000 0.00 0.00 33.11 2.12
397 398 1.033202 TCGCATCCGCCACACTACTA 61.033 55.000 0.00 0.00 33.11 1.82
398 399 2.184322 CGCATCCGCCACACTACT 59.816 61.111 0.00 0.00 33.11 2.57
399 400 2.165301 GTCGCATCCGCCACACTAC 61.165 63.158 0.00 0.00 33.11 2.73
400 401 2.183300 GTCGCATCCGCCACACTA 59.817 61.111 0.00 0.00 33.11 2.74
401 402 4.760047 GGTCGCATCCGCCACACT 62.760 66.667 0.00 0.00 29.67 3.55
410 411 3.716539 TAGCTGGCACGGTCGCATC 62.717 63.158 0.00 0.00 36.83 3.91
411 412 3.723235 CTAGCTGGCACGGTCGCAT 62.723 63.158 0.00 0.00 36.83 4.73
412 413 4.435436 CTAGCTGGCACGGTCGCA 62.435 66.667 0.00 0.00 36.83 5.10
414 415 3.701604 GACCTAGCTGGCACGGTCG 62.702 68.421 14.17 0.00 40.22 4.79
415 416 2.184579 GACCTAGCTGGCACGGTC 59.815 66.667 14.17 14.17 40.22 4.79
416 417 3.760035 CGACCTAGCTGGCACGGT 61.760 66.667 0.00 5.70 40.22 4.83
417 418 2.786495 ATCGACCTAGCTGGCACGG 61.786 63.158 12.25 0.00 40.22 4.94
418 419 1.589993 CATCGACCTAGCTGGCACG 60.590 63.158 0.00 1.85 40.22 5.34
419 420 1.227380 CCATCGACCTAGCTGGCAC 60.227 63.158 0.00 0.00 40.22 5.01
420 421 1.685765 ACCATCGACCTAGCTGGCA 60.686 57.895 0.00 0.00 40.22 4.92
421 422 1.227380 CACCATCGACCTAGCTGGC 60.227 63.158 0.00 0.00 40.22 4.85
422 423 1.043816 ATCACCATCGACCTAGCTGG 58.956 55.000 0.00 0.00 42.93 4.85
423 424 2.477825 CAATCACCATCGACCTAGCTG 58.522 52.381 0.00 0.00 0.00 4.24
424 425 1.202580 GCAATCACCATCGACCTAGCT 60.203 52.381 0.00 0.00 0.00 3.32
425 426 1.221414 GCAATCACCATCGACCTAGC 58.779 55.000 0.00 0.00 0.00 3.42
426 427 2.205074 GTGCAATCACCATCGACCTAG 58.795 52.381 0.00 0.00 37.24 3.02
427 428 1.470805 CGTGCAATCACCATCGACCTA 60.471 52.381 0.00 0.00 40.04 3.08
428 429 0.740868 CGTGCAATCACCATCGACCT 60.741 55.000 0.00 0.00 40.04 3.85
429 430 0.739462 TCGTGCAATCACCATCGACC 60.739 55.000 0.00 0.00 40.04 4.79
430 431 0.370273 GTCGTGCAATCACCATCGAC 59.630 55.000 6.49 6.49 40.04 4.20
431 432 0.739462 GGTCGTGCAATCACCATCGA 60.739 55.000 5.31 0.00 40.04 3.59
432 433 1.018752 TGGTCGTGCAATCACCATCG 61.019 55.000 8.29 0.00 40.04 3.84
433 434 0.729116 CTGGTCGTGCAATCACCATC 59.271 55.000 11.97 0.00 39.51 3.51
434 435 1.308069 GCTGGTCGTGCAATCACCAT 61.308 55.000 11.97 0.00 39.51 3.55
435 436 1.965930 GCTGGTCGTGCAATCACCA 60.966 57.895 11.23 11.23 40.04 4.17
436 437 1.308069 ATGCTGGTCGTGCAATCACC 61.308 55.000 0.00 0.00 44.01 4.02
437 438 0.097674 GATGCTGGTCGTGCAATCAC 59.902 55.000 0.00 0.00 44.01 3.06
438 439 1.026182 GGATGCTGGTCGTGCAATCA 61.026 55.000 0.00 0.00 44.01 2.57
439 440 1.723870 GGATGCTGGTCGTGCAATC 59.276 57.895 0.00 0.00 44.01 2.67
440 441 2.108514 CGGATGCTGGTCGTGCAAT 61.109 57.895 0.00 0.00 44.01 3.56
441 442 2.741985 CGGATGCTGGTCGTGCAA 60.742 61.111 0.00 0.00 44.01 4.08
442 443 3.529341 AACGGATGCTGGTCGTGCA 62.529 57.895 0.00 0.00 44.95 4.57
443 444 2.742372 AACGGATGCTGGTCGTGC 60.742 61.111 0.00 0.00 37.20 5.34
444 445 0.740868 ATCAACGGATGCTGGTCGTG 60.741 55.000 0.00 0.00 37.20 4.35
445 446 0.036388 AATCAACGGATGCTGGTCGT 60.036 50.000 0.00 0.00 38.89 4.34
446 447 0.652592 GAATCAACGGATGCTGGTCG 59.347 55.000 0.00 0.00 32.92 4.79
447 448 1.398390 GTGAATCAACGGATGCTGGTC 59.602 52.381 0.00 0.00 32.92 4.02
448 449 1.271325 TGTGAATCAACGGATGCTGGT 60.271 47.619 0.00 0.00 32.92 4.00
449 450 1.452110 TGTGAATCAACGGATGCTGG 58.548 50.000 0.00 0.00 32.92 4.85
450 451 2.793585 GCATGTGAATCAACGGATGCTG 60.794 50.000 9.28 0.00 32.92 4.41
451 452 1.402968 GCATGTGAATCAACGGATGCT 59.597 47.619 9.28 0.00 32.92 3.79
452 453 1.402968 AGCATGTGAATCAACGGATGC 59.597 47.619 8.76 8.76 32.92 3.91
453 454 3.770263 AAGCATGTGAATCAACGGATG 57.230 42.857 0.00 0.00 32.92 3.51
454 455 4.096382 GGTTAAGCATGTGAATCAACGGAT 59.904 41.667 0.00 0.00 34.43 4.18
455 456 3.438781 GGTTAAGCATGTGAATCAACGGA 59.561 43.478 0.00 0.00 0.00 4.69
456 457 3.727673 CGGTTAAGCATGTGAATCAACGG 60.728 47.826 5.38 0.00 0.00 4.44
457 458 3.124466 TCGGTTAAGCATGTGAATCAACG 59.876 43.478 5.38 0.00 0.00 4.10
458 459 4.437390 CCTCGGTTAAGCATGTGAATCAAC 60.437 45.833 5.38 0.00 0.00 3.18
459 460 3.689161 CCTCGGTTAAGCATGTGAATCAA 59.311 43.478 5.38 0.00 0.00 2.57
460 461 3.270027 CCTCGGTTAAGCATGTGAATCA 58.730 45.455 5.38 0.00 0.00 2.57
461 462 3.063997 CACCTCGGTTAAGCATGTGAATC 59.936 47.826 5.38 0.00 0.00 2.52
462 463 3.009723 CACCTCGGTTAAGCATGTGAAT 58.990 45.455 5.38 0.00 0.00 2.57
463 464 2.422597 CACCTCGGTTAAGCATGTGAA 58.577 47.619 5.38 0.00 0.00 3.18
464 465 1.338674 CCACCTCGGTTAAGCATGTGA 60.339 52.381 15.64 1.11 0.00 3.58
465 466 1.086696 CCACCTCGGTTAAGCATGTG 58.913 55.000 5.38 8.09 0.00 3.21
466 467 3.551259 CCACCTCGGTTAAGCATGT 57.449 52.632 5.38 0.00 0.00 3.21
476 477 0.107848 GTCACCCAATACCACCTCGG 60.108 60.000 0.00 0.00 42.50 4.63
477 478 0.107848 GGTCACCCAATACCACCTCG 60.108 60.000 0.00 0.00 35.73 4.63
478 479 0.107848 CGGTCACCCAATACCACCTC 60.108 60.000 0.00 0.00 35.35 3.85
479 480 0.545787 TCGGTCACCCAATACCACCT 60.546 55.000 0.00 0.00 35.35 4.00
480 481 0.392060 GTCGGTCACCCAATACCACC 60.392 60.000 0.00 0.00 35.35 4.61
481 482 0.392060 GGTCGGTCACCCAATACCAC 60.392 60.000 0.00 0.00 39.69 4.16
482 483 0.836830 TGGTCGGTCACCCAATACCA 60.837 55.000 1.68 1.68 46.18 3.25
483 484 0.392060 GTGGTCGGTCACCCAATACC 60.392 60.000 0.00 0.00 46.18 2.73
484 485 3.148340 GTGGTCGGTCACCCAATAC 57.852 57.895 0.00 0.00 46.18 1.89
491 492 4.612412 TTGGCGGTGGTCGGTCAC 62.612 66.667 1.32 1.32 39.69 3.67
492 493 3.818121 CTTTGGCGGTGGTCGGTCA 62.818 63.158 0.00 0.00 39.69 4.02
493 494 3.047877 CTTTGGCGGTGGTCGGTC 61.048 66.667 0.00 0.00 39.69 4.79
497 498 3.056328 GAGGCTTTGGCGGTGGTC 61.056 66.667 0.00 0.00 39.81 4.02
498 499 4.660938 GGAGGCTTTGGCGGTGGT 62.661 66.667 0.00 0.00 39.81 4.16
499 500 4.351054 AGGAGGCTTTGGCGGTGG 62.351 66.667 0.00 0.00 39.81 4.61
500 501 2.747855 GAGGAGGCTTTGGCGGTG 60.748 66.667 0.00 0.00 39.81 4.94
501 502 4.035102 GGAGGAGGCTTTGGCGGT 62.035 66.667 0.00 0.00 39.81 5.68
502 503 4.803908 GGGAGGAGGCTTTGGCGG 62.804 72.222 0.00 0.00 39.81 6.13
503 504 3.689002 GAGGGAGGAGGCTTTGGCG 62.689 68.421 0.00 0.00 39.81 5.69
504 505 1.857638 AAGAGGGAGGAGGCTTTGGC 61.858 60.000 0.00 0.00 37.82 4.52
505 506 0.254462 GAAGAGGGAGGAGGCTTTGG 59.746 60.000 0.00 0.00 0.00 3.28
506 507 0.987294 TGAAGAGGGAGGAGGCTTTG 59.013 55.000 0.00 0.00 0.00 2.77
507 508 1.843206 GATGAAGAGGGAGGAGGCTTT 59.157 52.381 0.00 0.00 0.00 3.51
508 509 1.009429 AGATGAAGAGGGAGGAGGCTT 59.991 52.381 0.00 0.00 0.00 4.35
509 510 0.641601 AGATGAAGAGGGAGGAGGCT 59.358 55.000 0.00 0.00 0.00 4.58
510 511 2.390225 TAGATGAAGAGGGAGGAGGC 57.610 55.000 0.00 0.00 0.00 4.70
511 512 4.504689 GCAAATAGATGAAGAGGGAGGAGG 60.505 50.000 0.00 0.00 0.00 4.30
512 513 4.640364 GCAAATAGATGAAGAGGGAGGAG 58.360 47.826 0.00 0.00 0.00 3.69
513 514 3.070159 CGCAAATAGATGAAGAGGGAGGA 59.930 47.826 0.00 0.00 0.00 3.71
514 515 3.397482 CGCAAATAGATGAAGAGGGAGG 58.603 50.000 0.00 0.00 0.00 4.30
515 516 3.397482 CCGCAAATAGATGAAGAGGGAG 58.603 50.000 0.00 0.00 0.00 4.30
516 517 2.485479 GCCGCAAATAGATGAAGAGGGA 60.485 50.000 0.00 0.00 0.00 4.20
517 518 1.876156 GCCGCAAATAGATGAAGAGGG 59.124 52.381 0.00 0.00 0.00 4.30
518 519 2.547211 CTGCCGCAAATAGATGAAGAGG 59.453 50.000 0.00 0.00 0.00 3.69
519 520 2.032204 GCTGCCGCAAATAGATGAAGAG 60.032 50.000 0.00 0.00 35.78 2.85
520 521 1.942657 GCTGCCGCAAATAGATGAAGA 59.057 47.619 0.00 0.00 35.78 2.87
521 522 1.333524 CGCTGCCGCAAATAGATGAAG 60.334 52.381 0.00 0.00 35.30 3.02
522 523 0.657312 CGCTGCCGCAAATAGATGAA 59.343 50.000 0.00 0.00 35.30 2.57
523 524 1.159713 CCGCTGCCGCAAATAGATGA 61.160 55.000 0.00 0.00 35.30 2.92
524 525 1.280746 CCGCTGCCGCAAATAGATG 59.719 57.895 0.00 0.00 35.30 2.90
525 526 1.893808 CCCGCTGCCGCAAATAGAT 60.894 57.895 0.00 0.00 35.30 1.98
526 527 2.513666 CCCGCTGCCGCAAATAGA 60.514 61.111 0.00 0.00 35.30 1.98
527 528 4.256090 GCCCGCTGCCGCAAATAG 62.256 66.667 0.00 0.00 35.30 1.73
535 536 4.424566 CACACATTGCCCGCTGCC 62.425 66.667 0.00 0.00 40.16 4.85
536 537 3.615536 GACACACATTGCCCGCTGC 62.616 63.158 0.00 0.00 41.77 5.25
537 538 2.562912 GACACACATTGCCCGCTG 59.437 61.111 0.00 0.00 0.00 5.18
538 539 3.049674 CGACACACATTGCCCGCT 61.050 61.111 0.00 0.00 0.00 5.52
539 540 4.759096 GCGACACACATTGCCCGC 62.759 66.667 0.00 0.00 41.38 6.13
540 541 3.049674 AGCGACACACATTGCCCG 61.050 61.111 0.00 0.00 0.00 6.13
541 542 2.260869 ACAGCGACACACATTGCCC 61.261 57.895 0.00 0.00 0.00 5.36
542 543 1.081906 CACAGCGACACACATTGCC 60.082 57.895 0.00 0.00 0.00 4.52
543 544 0.029300 AACACAGCGACACACATTGC 59.971 50.000 0.00 0.00 0.00 3.56
544 545 1.597690 CCAACACAGCGACACACATTG 60.598 52.381 0.00 0.00 0.00 2.82
545 546 0.662619 CCAACACAGCGACACACATT 59.337 50.000 0.00 0.00 0.00 2.71
546 547 1.785041 GCCAACACAGCGACACACAT 61.785 55.000 0.00 0.00 0.00 3.21
547 548 2.468670 GCCAACACAGCGACACACA 61.469 57.895 0.00 0.00 0.00 3.72
548 549 2.327940 GCCAACACAGCGACACAC 59.672 61.111 0.00 0.00 0.00 3.82
549 550 2.899838 GGCCAACACAGCGACACA 60.900 61.111 0.00 0.00 0.00 3.72
550 551 3.660111 GGGCCAACACAGCGACAC 61.660 66.667 4.39 0.00 0.00 3.67
551 552 3.490031 ATGGGCCAACACAGCGACA 62.490 57.895 11.89 0.00 0.00 4.35
552 553 2.672996 ATGGGCCAACACAGCGAC 60.673 61.111 11.89 0.00 0.00 5.19
553 554 2.359850 GATGGGCCAACACAGCGA 60.360 61.111 11.89 0.00 0.00 4.93
554 555 2.672651 TGATGGGCCAACACAGCG 60.673 61.111 11.89 0.00 0.00 5.18
555 556 1.604593 AGTGATGGGCCAACACAGC 60.605 57.895 37.87 19.35 39.16 4.40
556 557 0.250858 TCAGTGATGGGCCAACACAG 60.251 55.000 37.87 32.32 39.16 3.66
557 558 0.405198 ATCAGTGATGGGCCAACACA 59.595 50.000 37.87 24.50 39.16 3.72
558 559 2.292267 CTATCAGTGATGGGCCAACAC 58.708 52.381 32.61 32.61 37.41 3.32
559 560 1.212688 CCTATCAGTGATGGGCCAACA 59.787 52.381 21.21 12.53 34.12 3.33
560 561 1.212935 ACCTATCAGTGATGGGCCAAC 59.787 52.381 29.88 9.11 43.23 3.77
561 562 1.490490 GACCTATCAGTGATGGGCCAA 59.510 52.381 29.88 0.00 43.23 4.52
562 563 1.131638 GACCTATCAGTGATGGGCCA 58.868 55.000 29.88 9.61 43.23 5.36
563 564 0.398318 GGACCTATCAGTGATGGGCC 59.602 60.000 29.88 26.13 43.23 5.80
564 565 1.131638 TGGACCTATCAGTGATGGGC 58.868 55.000 29.88 22.24 43.23 5.36
565 566 2.028658 CGATGGACCTATCAGTGATGGG 60.029 54.545 28.71 28.71 44.66 4.00
566 567 2.611473 GCGATGGACCTATCAGTGATGG 60.611 54.545 16.15 12.70 0.00 3.51
567 568 2.681706 GCGATGGACCTATCAGTGATG 58.318 52.381 16.15 2.34 0.00 3.07
568 569 1.270826 CGCGATGGACCTATCAGTGAT 59.729 52.381 11.12 11.12 0.00 3.06
569 570 0.668535 CGCGATGGACCTATCAGTGA 59.331 55.000 0.00 0.00 0.00 3.41
570 571 0.668535 TCGCGATGGACCTATCAGTG 59.331 55.000 3.71 0.00 0.00 3.66
571 572 0.669077 GTCGCGATGGACCTATCAGT 59.331 55.000 14.06 0.00 0.00 3.41
572 573 0.386100 CGTCGCGATGGACCTATCAG 60.386 60.000 20.66 0.00 33.30 2.90
573 574 1.099295 ACGTCGCGATGGACCTATCA 61.099 55.000 30.24 0.00 33.30 2.15
574 575 0.870393 TACGTCGCGATGGACCTATC 59.130 55.000 30.24 5.39 33.30 2.08
575 576 0.590195 GTACGTCGCGATGGACCTAT 59.410 55.000 29.67 11.84 33.30 2.57
576 577 0.462581 AGTACGTCGCGATGGACCTA 60.463 55.000 34.40 15.09 31.41 3.08
577 578 1.310933 AAGTACGTCGCGATGGACCT 61.311 55.000 34.40 23.09 31.41 3.85
578 579 0.864797 GAAGTACGTCGCGATGGACC 60.865 60.000 34.40 19.84 31.41 4.46
579 580 0.098376 AGAAGTACGTCGCGATGGAC 59.902 55.000 31.99 31.99 0.00 4.02
580 581 1.328680 GTAGAAGTACGTCGCGATGGA 59.671 52.381 30.24 21.73 0.00 3.41
581 582 1.063027 TGTAGAAGTACGTCGCGATGG 59.937 52.381 30.24 19.35 30.95 3.51
582 583 2.447089 TGTAGAAGTACGTCGCGATG 57.553 50.000 26.13 26.13 30.95 3.84
583 584 2.286831 CCATGTAGAAGTACGTCGCGAT 60.287 50.000 14.06 0.00 30.95 4.58
584 585 1.063027 CCATGTAGAAGTACGTCGCGA 59.937 52.381 3.71 3.71 30.95 5.87
585 586 1.063027 TCCATGTAGAAGTACGTCGCG 59.937 52.381 0.00 0.00 30.95 5.87
586 587 2.838386 TCCATGTAGAAGTACGTCGC 57.162 50.000 3.05 1.91 30.95 5.19
587 588 7.745022 TTTAATTCCATGTAGAAGTACGTCG 57.255 36.000 3.05 0.00 30.95 5.12
588 589 8.062448 GCATTTAATTCCATGTAGAAGTACGTC 58.938 37.037 0.00 0.00 30.95 4.34
589 590 7.551262 TGCATTTAATTCCATGTAGAAGTACGT 59.449 33.333 0.00 0.00 30.95 3.57
590 591 7.915508 TGCATTTAATTCCATGTAGAAGTACG 58.084 34.615 0.00 0.00 30.95 3.67
603 604 8.546597 ACAACCACTAATTTGCATTTAATTCC 57.453 30.769 0.00 0.00 0.00 3.01
608 609 6.656632 TGGACAACCACTAATTTGCATTTA 57.343 33.333 0.00 0.00 41.77 1.40
633 634 3.636231 CCGTGGGGCTCACTCCAA 61.636 66.667 16.74 0.00 43.94 3.53
635 636 4.394712 CACCGTGGGGCTCACTCC 62.395 72.222 16.74 0.00 43.94 3.85
649 650 7.557719 TCAGAAAATGGGAGAAATATCTTCACC 59.442 37.037 5.92 5.92 35.54 4.02
934 942 1.805945 GTAGCTTCTGTGACGGCCG 60.806 63.158 26.86 26.86 0.00 6.13
1018 1026 1.009675 CAAGGTCACAGCAACGCAC 60.010 57.895 0.00 0.00 0.00 5.34
1186 1197 5.751586 ACCTGGCCTTAATTCTAATTCGAA 58.248 37.500 3.32 0.00 0.00 3.71
1206 1217 8.814448 TTCCTATTCCTATGATTTTCCTACCT 57.186 34.615 0.00 0.00 0.00 3.08
1224 1249 9.790344 CATCTCATTTCCTATGACTTTCCTATT 57.210 33.333 0.00 0.00 0.00 1.73
1226 1251 8.424918 GTCATCTCATTTCCTATGACTTTCCTA 58.575 37.037 0.00 0.00 43.07 2.94
1228 1253 7.050377 TGTCATCTCATTTCCTATGACTTTCC 58.950 38.462 13.59 0.00 45.40 3.13
1277 1302 8.130469 GGTGTGAATCAAAATGCATTTTCTTTT 58.870 29.630 29.92 22.63 37.86 2.27
1282 1307 5.821470 TGTGGTGTGAATCAAAATGCATTTT 59.179 32.000 27.73 27.73 40.37 1.82
1284 1309 4.958509 TGTGGTGTGAATCAAAATGCATT 58.041 34.783 5.99 5.99 0.00 3.56
1285 1310 4.561938 CCTGTGGTGTGAATCAAAATGCAT 60.562 41.667 0.00 0.00 0.00 3.96
1286 1311 3.243805 CCTGTGGTGTGAATCAAAATGCA 60.244 43.478 0.00 0.00 0.00 3.96
1289 1314 6.423776 AAATCCTGTGGTGTGAATCAAAAT 57.576 33.333 0.00 0.00 0.00 1.82
1290 1315 5.867903 AAATCCTGTGGTGTGAATCAAAA 57.132 34.783 0.00 0.00 0.00 2.44
1323 1348 8.571336 CATAGGAAAATAAACATTAGCCCAGAG 58.429 37.037 0.00 0.00 0.00 3.35
1364 1389 7.610305 TGGTTTGTAGGAACAGAATCTTATTCC 59.390 37.037 12.86 12.86 40.87 3.01
1365 1390 8.561738 TGGTTTGTAGGAACAGAATCTTATTC 57.438 34.615 0.00 0.00 36.83 1.75
1366 1391 8.934023 TTGGTTTGTAGGAACAGAATCTTATT 57.066 30.769 0.00 0.00 36.83 1.40
1367 1392 8.934023 TTTGGTTTGTAGGAACAGAATCTTAT 57.066 30.769 0.00 0.00 36.83 1.73
1368 1393 7.447238 CCTTTGGTTTGTAGGAACAGAATCTTA 59.553 37.037 0.00 0.00 36.83 2.10
1369 1394 6.265422 CCTTTGGTTTGTAGGAACAGAATCTT 59.735 38.462 0.00 0.00 36.83 2.40
1370 1395 5.770162 CCTTTGGTTTGTAGGAACAGAATCT 59.230 40.000 0.00 0.00 36.83 2.40
1377 1402 2.557056 GAGCCCTTTGGTTTGTAGGAAC 59.443 50.000 0.00 0.00 0.00 3.62
1596 1628 8.273780 TGAAGCCTTGAATAATTCTTCTCTTC 57.726 34.615 5.31 10.90 33.21 2.87
1806 1853 3.707102 GGTAGCCTCTAACACCTCAAGAT 59.293 47.826 0.00 0.00 0.00 2.40
1813 1860 2.116238 TCCATGGTAGCCTCTAACACC 58.884 52.381 12.58 0.00 0.00 4.16
1830 1877 2.097036 CTGCAGCATTTCCTTGATCCA 58.903 47.619 0.00 0.00 0.00 3.41
1831 1878 2.372264 TCTGCAGCATTTCCTTGATCC 58.628 47.619 9.47 0.00 0.00 3.36
1880 1927 8.904834 AGTAGATAAGTAGACGACATGATTTGT 58.095 33.333 0.00 0.00 42.79 2.83
1897 1944 9.035607 CAGTTATACCTTGCAACAGTAGATAAG 57.964 37.037 0.00 0.00 0.00 1.73
1916 1963 5.066375 GCATGCCATTGTTCAGTCAGTTATA 59.934 40.000 6.36 0.00 0.00 0.98
2013 2060 3.964031 CCTCCTTCTCATAGTAAGGCTGT 59.036 47.826 0.00 0.00 41.76 4.40
2024 2071 2.416680 GCAGAAAGCCTCCTTCTCAT 57.583 50.000 0.00 0.00 37.23 2.90
2205 2256 5.408604 ACTGGTAGTGAAAATTACTGCTTCG 59.591 40.000 0.00 0.00 32.32 3.79
2297 2348 3.678056 ACAGTTCGTCCTTAATCTGCA 57.322 42.857 0.00 0.00 0.00 4.41
2322 2373 2.617021 GGCTCCAATTCCTACGGTCAAA 60.617 50.000 0.00 0.00 0.00 2.69
2392 2443 7.282585 TGTCTGGATTGATATAAAGTTCAGGG 58.717 38.462 0.00 0.00 0.00 4.45
2575 2633 4.659172 CTGCGCCAAGGTTCCCCA 62.659 66.667 4.18 0.00 0.00 4.96
2581 2639 0.889186 CTTTACCACTGCGCCAAGGT 60.889 55.000 17.12 17.12 38.14 3.50
2665 2723 1.940613 CTATTGTACGCAGCCTTTCCC 59.059 52.381 0.00 0.00 0.00 3.97
2728 2797 1.362224 TTCTCTAAAGGGCAGCCTGT 58.638 50.000 12.43 0.00 0.00 4.00
2815 2902 8.114331 TCAAGGCAATGATTCCATGATTATAC 57.886 34.615 0.00 0.00 32.36 1.47
2823 2910 2.957006 GCTCTCAAGGCAATGATTCCAT 59.043 45.455 0.00 0.00 33.66 3.41
2868 2959 0.179004 TTTTCCGCCCAGACATGTGT 60.179 50.000 1.15 0.00 0.00 3.72
2869 2960 1.135315 CATTTTCCGCCCAGACATGTG 60.135 52.381 1.15 0.00 0.00 3.21
2871 2962 1.133025 GACATTTTCCGCCCAGACATG 59.867 52.381 0.00 0.00 0.00 3.21
2972 4263 2.348104 GGCGGGATTTTGTGGGGTC 61.348 63.158 0.00 0.00 0.00 4.46
2989 4280 4.075793 TCCGGGTGAGGAGAGGGG 62.076 72.222 0.00 0.00 34.92 4.79
3062 4353 2.760385 GACCGGAGAGGAGGGTGG 60.760 72.222 9.46 0.00 45.00 4.61
3085 4380 1.141657 GATCTGTTCCTAGCCATGCCA 59.858 52.381 0.00 0.00 0.00 4.92
3101 4396 2.870175 AGATCGACCGGATTCAGATCT 58.130 47.619 9.46 15.93 42.02 2.75
3118 4413 3.142951 CTCCAAGTCGACGGATCTAGAT 58.857 50.000 10.46 4.47 0.00 1.98
3121 4416 1.022735 GCTCCAAGTCGACGGATCTA 58.977 55.000 10.46 0.00 0.00 1.98
3395 4768 1.450134 CAGCTACCGCATCTGGCAA 60.450 57.895 0.00 0.00 45.17 4.52
3451 4825 1.536073 CGCACCTTCTCCCTCTCACA 61.536 60.000 0.00 0.00 0.00 3.58
3590 4968 5.006153 ACATGTTATCGTCATCTTTCGGA 57.994 39.130 0.00 0.00 0.00 4.55
3599 4977 1.737696 GCACCGGACATGTTATCGTCA 60.738 52.381 9.46 0.00 33.66 4.35
4026 5487 4.734398 TGTTCATGCCCAAATACCAATC 57.266 40.909 0.00 0.00 0.00 2.67
4039 5500 4.445452 AGACCATTCACAATGTTCATGC 57.555 40.909 0.00 0.00 37.18 4.06
4170 5702 2.804986 TGCCATTCATGAGCTTACCA 57.195 45.000 6.93 0.00 0.00 3.25
4239 5771 4.897509 TCAGTCAGATCACCATTCAGTT 57.102 40.909 0.00 0.00 0.00 3.16
4275 5807 2.002586 CTGATACCAGCCTGTTCAACG 58.997 52.381 0.00 0.00 33.07 4.10
4276 5808 3.059352 ACTGATACCAGCCTGTTCAAC 57.941 47.619 0.00 0.00 44.16 3.18
4558 6129 6.767456 AGAGATCACAGACAAAGACATTTCT 58.233 36.000 0.00 0.00 0.00 2.52
4930 6507 2.799126 ACGCAAAGAACCCCATCATA 57.201 45.000 0.00 0.00 0.00 2.15
4987 6564 7.952368 TCAGGGAGTATCAATCTAAGATCATCA 59.048 37.037 0.00 0.00 36.25 3.07
5011 6588 2.007608 CTGTAGTCAGGATCGTCGTCA 58.992 52.381 0.00 0.00 37.97 4.35
5131 9377 3.202097 TCGTTCACACAAAAGATCAGCA 58.798 40.909 0.00 0.00 0.00 4.41
5205 9460 4.384208 GGAAACAGAATTCCTAGCCTAGCA 60.384 45.833 0.65 0.00 44.54 3.49
5421 9687 6.655062 TGCAAAATTTGTAACTGACTACTCG 58.345 36.000 7.60 0.00 0.00 4.18
5478 9745 7.353497 CAGCTTCTGATCATCATCATGTTAAC 58.647 38.462 0.00 0.00 38.42 2.01
5672 9939 0.108520 TACGAAATCCTGACCGCCAC 60.109 55.000 0.00 0.00 0.00 5.01
5673 9940 0.108520 GTACGAAATCCTGACCGCCA 60.109 55.000 0.00 0.00 0.00 5.69
5674 9941 1.143969 CGTACGAAATCCTGACCGCC 61.144 60.000 10.44 0.00 0.00 6.13
5675 9942 1.749609 GCGTACGAAATCCTGACCGC 61.750 60.000 21.65 0.00 0.00 5.68
5676 9943 0.457166 TGCGTACGAAATCCTGACCG 60.457 55.000 21.65 0.00 0.00 4.79
5792 10059 2.797786 ACTAGTCTCGTGCTCCTTTCT 58.202 47.619 0.00 0.00 0.00 2.52
5819 10096 7.678454 GCACATTTTTCGTTTTCTGGGATTTTT 60.678 33.333 0.00 0.00 0.00 1.94
5820 10097 6.238347 GCACATTTTTCGTTTTCTGGGATTTT 60.238 34.615 0.00 0.00 0.00 1.82
5821 10098 5.236263 GCACATTTTTCGTTTTCTGGGATTT 59.764 36.000 0.00 0.00 0.00 2.17
5822 10099 4.749598 GCACATTTTTCGTTTTCTGGGATT 59.250 37.500 0.00 0.00 0.00 3.01
5823 10100 4.306600 GCACATTTTTCGTTTTCTGGGAT 58.693 39.130 0.00 0.00 0.00 3.85
5824 10101 3.712187 GCACATTTTTCGTTTTCTGGGA 58.288 40.909 0.00 0.00 0.00 4.37
5825 10102 2.470999 CGCACATTTTTCGTTTTCTGGG 59.529 45.455 0.00 0.00 0.00 4.45
5826 10103 2.470999 CCGCACATTTTTCGTTTTCTGG 59.529 45.455 0.00 0.00 0.00 3.86
5827 10104 3.061271 CACCGCACATTTTTCGTTTTCTG 60.061 43.478 0.00 0.00 0.00 3.02
5828 10105 3.112580 CACCGCACATTTTTCGTTTTCT 58.887 40.909 0.00 0.00 0.00 2.52
5918 10199 1.302511 TTGCCCGTCTCTTTCAGCC 60.303 57.895 0.00 0.00 0.00 4.85
5930 10211 0.251916 TCCTCCAGTATTGTTGCCCG 59.748 55.000 0.00 0.00 0.00 6.13
5994 10275 8.719648 CATCACCGTACTTATTAGTAGTAGGAG 58.280 40.741 12.25 6.89 37.53 3.69
5995 10276 7.173907 GCATCACCGTACTTATTAGTAGTAGGA 59.826 40.741 12.25 2.11 37.53 2.94
5996 10277 7.174599 AGCATCACCGTACTTATTAGTAGTAGG 59.825 40.741 0.00 0.03 37.53 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.