Multiple sequence alignment - TraesCS4D01G177600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G177600 chr4D 100.000 5056 0 0 1 5056 308953556 308948501 0.000000e+00 9337.0
1 TraesCS4D01G177600 chr4D 85.200 250 33 4 4273 4519 277383312 277383560 2.340000e-63 254.0
2 TraesCS4D01G177600 chr4D 83.158 95 13 3 4022 4114 12358487 12358394 3.240000e-12 84.2
3 TraesCS4D01G177600 chr4A 96.782 3418 67 19 795 4200 166297272 166300658 0.000000e+00 5662.0
4 TraesCS4D01G177600 chr4A 93.548 868 42 3 4191 5056 166301094 166301949 0.000000e+00 1280.0
5 TraesCS4D01G177600 chr4A 83.436 326 42 10 194 511 744546898 744546577 4.950000e-75 292.0
6 TraesCS4D01G177600 chr4A 80.303 198 36 3 4674 4870 559898102 559897907 4.080000e-31 147.0
7 TraesCS4D01G177600 chr4A 81.395 86 14 2 4018 4102 230668574 230668658 9.080000e-08 69.4
8 TraesCS4D01G177600 chr4B 96.357 2196 47 17 795 2964 386027567 386025379 0.000000e+00 3581.0
9 TraesCS4D01G177600 chr4B 96.336 1474 40 6 2976 4437 386023957 386022486 0.000000e+00 2410.0
10 TraesCS4D01G177600 chr4B 96.735 582 18 1 4475 5056 386022487 386021907 0.000000e+00 968.0
11 TraesCS4D01G177600 chr4B 85.196 331 38 8 193 516 648569152 648568826 3.770000e-86 329.0
12 TraesCS4D01G177600 chr4B 83.489 321 45 5 194 508 131165646 131165964 4.950000e-75 292.0
13 TraesCS4D01G177600 chr4B 85.259 251 35 2 4273 4521 242709417 242709667 1.810000e-64 257.0
14 TraesCS4D01G177600 chr4B 86.243 189 26 0 1 189 373511615 373511803 6.640000e-49 206.0
15 TraesCS4D01G177600 chr4B 84.314 102 11 5 687 785 652887896 652887995 1.500000e-15 95.3
16 TraesCS4D01G177600 chr4B 94.444 54 2 1 4987 5039 453470574 453470627 1.170000e-11 82.4
17 TraesCS4D01G177600 chr1A 84.305 892 103 23 4127 5001 521976272 521977143 0.000000e+00 837.0
18 TraesCS4D01G177600 chr1A 77.910 335 45 14 4713 5029 75392904 75393227 1.120000e-41 182.0
19 TraesCS4D01G177600 chr1A 87.234 141 9 3 4522 4654 521976518 521976657 8.770000e-33 152.0
20 TraesCS4D01G177600 chr1D 84.404 327 39 8 194 512 302247155 302246833 1.370000e-80 311.0
21 TraesCS4D01G177600 chr1D 89.820 167 17 0 23 189 315637332 315637498 1.100000e-51 215.0
22 TraesCS4D01G177600 chr1D 84.783 92 9 4 703 791 467361441 467361352 2.510000e-13 87.9
23 TraesCS4D01G177600 chr3D 84.326 319 45 4 194 508 355734424 355734741 1.770000e-79 307.0
24 TraesCS4D01G177600 chr3D 91.005 189 17 0 1 189 328214401 328214589 6.500000e-64 255.0
25 TraesCS4D01G177600 chr3D 82.075 318 36 10 4205 4521 562531908 562532205 8.400000e-63 252.0
26 TraesCS4D01G177600 chr3D 86.979 192 22 1 1 189 207011724 207011533 3.970000e-51 213.0
27 TraesCS4D01G177600 chr3D 86.772 189 19 5 4 188 14784011 14783825 6.640000e-49 206.0
28 TraesCS4D01G177600 chr3D 75.843 356 60 15 4674 5024 1882358 1882024 1.880000e-34 158.0
29 TraesCS4D01G177600 chr3B 84.211 323 39 10 194 508 798202347 798202665 2.290000e-78 303.0
30 TraesCS4D01G177600 chr3B 83.642 324 45 5 194 511 582746649 582746328 1.060000e-76 298.0
31 TraesCS4D01G177600 chr3B 83.133 249 31 10 4285 4531 673299031 673298792 3.070000e-52 217.0
32 TraesCS4D01G177600 chr3B 86.631 187 24 1 1 187 193391381 193391566 6.640000e-49 206.0
33 TraesCS4D01G177600 chr3B 81.944 216 28 7 4813 5025 546869371 546869164 6.730000e-39 172.0
34 TraesCS4D01G177600 chr3B 75.211 355 64 11 4674 5024 5069053 5068719 4.080000e-31 147.0
35 TraesCS4D01G177600 chr3B 97.500 40 1 0 1 40 79574278 79574239 9.080000e-08 69.4
36 TraesCS4D01G177600 chr3B 94.872 39 2 0 2 40 119664348 119664310 1.520000e-05 62.1
37 TraesCS4D01G177600 chr2D 83.385 325 46 5 194 512 375262673 375262351 1.380000e-75 294.0
38 TraesCS4D01G177600 chr2D 79.944 354 58 9 4674 5023 298743663 298743319 1.090000e-61 248.0
39 TraesCS4D01G177600 chr2D 84.536 97 14 1 690 785 579062060 579061964 1.500000e-15 95.3
40 TraesCS4D01G177600 chr2D 81.034 116 18 4 4018 4131 60782952 60782839 6.970000e-14 89.8
41 TraesCS4D01G177600 chr2D 89.655 58 4 2 4977 5033 267300477 267300533 7.020000e-09 73.1
42 TraesCS4D01G177600 chr5B 83.333 324 47 5 194 511 456870358 456870036 4.950000e-75 292.0
43 TraesCS4D01G177600 chr1B 81.366 322 41 8 4713 5029 297783823 297783516 1.410000e-60 244.0
44 TraesCS4D01G177600 chr1B 89.820 167 16 1 23 189 455355570 455355405 3.970000e-51 213.0
45 TraesCS4D01G177600 chr1B 84.746 118 12 5 687 800 175929560 175929675 4.140000e-21 113.0
46 TraesCS4D01G177600 chr3A 83.582 268 29 9 4263 4520 446470206 446470468 2.350000e-58 237.0
47 TraesCS4D01G177600 chr3A 82.000 100 17 1 687 785 336891332 336891431 3.240000e-12 84.2
48 TraesCS4D01G177600 chr6B 88.889 189 20 1 1 189 470044330 470044143 1.090000e-56 231.0
49 TraesCS4D01G177600 chr5D 83.665 251 36 3 4273 4522 387662375 387662621 1.090000e-56 231.0
50 TraesCS4D01G177600 chr5D 80.272 147 16 7 4523 4661 387662485 387662626 1.160000e-16 99.0
51 TraesCS4D01G177600 chr5D 84.615 104 8 4 4560 4655 474748562 474748665 4.170000e-16 97.1
52 TraesCS4D01G177600 chr5D 80.198 101 16 3 4018 4116 536284706 536284608 7.020000e-09 73.1
53 TraesCS4D01G177600 chr7B 86.170 188 26 0 2 189 445638214 445638401 2.390000e-48 204.0
54 TraesCS4D01G177600 chr7B 77.545 334 45 15 4713 5028 591061676 591061355 1.870000e-39 174.0
55 TraesCS4D01G177600 chr7B 92.453 53 4 0 4018 4070 329794158 329794210 5.430000e-10 76.8
56 TraesCS4D01G177600 chr6A 75.332 377 67 16 4690 5045 58308026 58308397 1.880000e-34 158.0
57 TraesCS4D01G177600 chr6A 85.256 156 17 1 4522 4671 376482941 376482786 6.780000e-34 156.0
58 TraesCS4D01G177600 chr6A 85.567 97 13 1 690 785 566446908 566446812 3.220000e-17 100.0
59 TraesCS4D01G177600 chr6A 78.632 117 18 5 4018 4132 506636510 506636399 2.530000e-08 71.3
60 TraesCS4D01G177600 chr6D 87.037 108 10 4 687 791 9133456 9133562 8.890000e-23 119.0
61 TraesCS4D01G177600 chr6D 85.294 102 8 6 687 784 182325330 182325428 1.160000e-16 99.0
62 TraesCS4D01G177600 chr6D 80.000 115 16 5 4018 4130 365784563 365784454 1.510000e-10 78.7
63 TraesCS4D01G177600 chr7D 76.303 211 36 11 3139 3346 217874989 217875188 3.220000e-17 100.0
64 TraesCS4D01G177600 chr7D 84.884 86 5 3 4578 4655 105225148 105225233 4.200000e-11 80.5
65 TraesCS4D01G177600 chr5A 84.783 92 13 1 690 780 491235459 491235368 1.940000e-14 91.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G177600 chr4D 308948501 308953556 5055 True 9337.000000 9337 100.0000 1 5056 1 chr4D.!!$R2 5055
1 TraesCS4D01G177600 chr4A 166297272 166301949 4677 False 3471.000000 5662 95.1650 795 5056 2 chr4A.!!$F2 4261
2 TraesCS4D01G177600 chr4B 386021907 386027567 5660 True 2319.666667 3581 96.4760 795 5056 3 chr4B.!!$R2 4261
3 TraesCS4D01G177600 chr1A 521976272 521977143 871 False 494.500000 837 85.7695 4127 5001 2 chr1A.!!$F2 874

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
94 95 0.037605 ATGAGGACGTTGGTCGGTTC 60.038 55.000 0.00 0.00 44.39 3.62 F
559 560 0.108138 AGCCATACTGAAGCCACGTC 60.108 55.000 0.00 0.00 0.00 4.34 F
695 696 0.108186 CGAGGTCAGCTGTTGCCATA 60.108 55.000 14.67 0.00 40.80 2.74 F
977 987 0.108424 CCCAGCTGTCTAGTCAGTGC 60.108 60.000 13.81 6.07 37.70 4.40 F
979 989 1.274728 CCAGCTGTCTAGTCAGTGCTT 59.725 52.381 13.81 0.68 37.70 3.91 F
2808 2835 0.391130 CTTAAGTACCAGGCTGCGCA 60.391 55.000 10.98 10.98 0.00 6.09 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1173 1197 1.153449 CGCATACCTTCCGCTGGAA 60.153 57.895 9.22 9.22 39.66 3.53 R
1813 1837 2.916702 TTCCTGTCATCATCATCCCG 57.083 50.000 0.00 0.00 0.00 5.14 R
2211 2235 5.053145 GGAAGACAGTACATCAATAGCCAG 58.947 45.833 0.00 0.00 0.00 4.85 R
2808 2835 7.765695 ATCAATTGAGTAAACAACACCAGAT 57.234 32.000 14.54 0.00 32.50 2.90 R
2976 4419 8.824781 CAGATGTAATGATCAGACAAAACTAGG 58.175 37.037 15.12 4.28 0.00 3.02 R
4215 6117 1.079543 CTCTCAAGTGGAGGCGTGG 60.080 63.158 0.00 0.00 44.19 4.94 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 4.012895 GCGCCAACTGTCGTGGTG 62.013 66.667 7.54 7.54 36.39 4.17
31 32 2.279851 CGCCAACTGTCGTGGTGA 60.280 61.111 6.26 0.00 35.39 4.02
32 33 1.667830 CGCCAACTGTCGTGGTGAT 60.668 57.895 6.26 0.00 35.39 3.06
33 34 1.626654 CGCCAACTGTCGTGGTGATC 61.627 60.000 6.26 0.00 35.39 2.92
34 35 0.320771 GCCAACTGTCGTGGTGATCT 60.321 55.000 0.00 0.00 0.00 2.75
35 36 1.714794 CCAACTGTCGTGGTGATCTC 58.285 55.000 0.00 0.00 0.00 2.75
36 37 1.000843 CCAACTGTCGTGGTGATCTCA 59.999 52.381 0.00 0.00 0.00 3.27
37 38 2.061773 CAACTGTCGTGGTGATCTCAC 58.938 52.381 1.59 1.59 45.72 3.51
46 47 2.305405 GTGATCTCACGGCAGATGC 58.695 57.895 3.27 0.00 37.10 3.91
66 67 2.524306 CCATGGGTTGGCTTAAAGTGA 58.476 47.619 2.85 0.00 39.09 3.41
67 68 2.493278 CCATGGGTTGGCTTAAAGTGAG 59.507 50.000 2.85 0.00 39.09 3.51
68 69 2.286365 TGGGTTGGCTTAAAGTGAGG 57.714 50.000 0.00 0.00 0.00 3.86
69 70 1.203001 TGGGTTGGCTTAAAGTGAGGG 60.203 52.381 0.00 0.00 0.00 4.30
70 71 1.545841 GGTTGGCTTAAAGTGAGGGG 58.454 55.000 0.00 0.00 0.00 4.79
71 72 0.888619 GTTGGCTTAAAGTGAGGGGC 59.111 55.000 0.00 0.00 0.00 5.80
72 73 0.777446 TTGGCTTAAAGTGAGGGGCT 59.223 50.000 0.00 0.00 0.00 5.19
73 74 1.663911 TGGCTTAAAGTGAGGGGCTA 58.336 50.000 0.00 0.00 0.00 3.93
74 75 1.280998 TGGCTTAAAGTGAGGGGCTAC 59.719 52.381 0.00 0.00 0.00 3.58
75 76 1.280998 GGCTTAAAGTGAGGGGCTACA 59.719 52.381 0.00 0.00 0.00 2.74
76 77 2.092375 GGCTTAAAGTGAGGGGCTACAT 60.092 50.000 0.00 0.00 0.00 2.29
77 78 2.945668 GCTTAAAGTGAGGGGCTACATG 59.054 50.000 0.00 0.00 0.00 3.21
78 79 3.370527 GCTTAAAGTGAGGGGCTACATGA 60.371 47.826 0.00 0.00 0.00 3.07
79 80 4.446371 CTTAAAGTGAGGGGCTACATGAG 58.554 47.826 0.00 0.00 0.00 2.90
80 81 1.207791 AAGTGAGGGGCTACATGAGG 58.792 55.000 0.00 0.00 0.00 3.86
81 82 0.339859 AGTGAGGGGCTACATGAGGA 59.660 55.000 0.00 0.00 0.00 3.71
82 83 0.466124 GTGAGGGGCTACATGAGGAC 59.534 60.000 0.00 0.00 0.00 3.85
83 84 1.043116 TGAGGGGCTACATGAGGACG 61.043 60.000 0.00 0.00 0.00 4.79
84 85 1.001760 AGGGGCTACATGAGGACGT 59.998 57.895 0.00 0.00 0.00 4.34
85 86 0.617820 AGGGGCTACATGAGGACGTT 60.618 55.000 0.00 0.00 0.00 3.99
86 87 0.462047 GGGGCTACATGAGGACGTTG 60.462 60.000 0.00 0.00 0.00 4.10
87 88 0.462047 GGGCTACATGAGGACGTTGG 60.462 60.000 0.00 0.00 0.00 3.77
88 89 0.249398 GGCTACATGAGGACGTTGGT 59.751 55.000 0.00 0.00 0.00 3.67
89 90 1.641577 GCTACATGAGGACGTTGGTC 58.358 55.000 0.00 0.00 42.66 4.02
90 91 1.909376 CTACATGAGGACGTTGGTCG 58.091 55.000 0.00 0.00 44.39 4.79
91 92 0.528924 TACATGAGGACGTTGGTCGG 59.471 55.000 0.00 0.00 44.39 4.79
92 93 1.292223 CATGAGGACGTTGGTCGGT 59.708 57.895 0.00 0.00 44.39 4.69
93 94 0.320421 CATGAGGACGTTGGTCGGTT 60.320 55.000 0.00 0.00 44.39 4.44
94 95 0.037605 ATGAGGACGTTGGTCGGTTC 60.038 55.000 0.00 0.00 44.39 3.62
95 96 1.373873 GAGGACGTTGGTCGGTTCC 60.374 63.158 0.00 0.00 44.39 3.62
96 97 2.735857 GGACGTTGGTCGGTTCCG 60.736 66.667 4.74 4.74 44.39 4.30
97 98 2.735857 GACGTTGGTCGGTTCCGG 60.736 66.667 11.37 0.00 44.69 5.14
98 99 3.211564 GACGTTGGTCGGTTCCGGA 62.212 63.158 0.00 0.00 44.69 5.14
99 100 2.431942 CGTTGGTCGGTTCCGGAG 60.432 66.667 3.34 0.00 35.71 4.63
100 101 3.927163 CGTTGGTCGGTTCCGGAGG 62.927 68.421 3.34 0.00 42.73 4.30
118 119 2.176546 CGAGGTTGGCACGCATTG 59.823 61.111 0.00 0.00 0.00 2.82
119 120 2.568090 GAGGTTGGCACGCATTGG 59.432 61.111 0.00 0.00 0.00 3.16
120 121 2.203480 AGGTTGGCACGCATTGGT 60.203 55.556 0.00 0.00 0.00 3.67
121 122 2.049248 GGTTGGCACGCATTGGTG 60.049 61.111 0.00 2.10 40.89 4.17
122 123 2.727544 GTTGGCACGCATTGGTGT 59.272 55.556 0.00 0.00 40.08 4.16
128 129 2.518112 ACGCATTGGTGTGTGGCA 60.518 55.556 0.00 0.00 46.71 4.92
129 130 2.050168 CGCATTGGTGTGTGGCAC 60.050 61.111 11.55 11.55 46.97 5.01
136 137 2.279252 GTGTGTGGCACGAGACGT 60.279 61.111 13.77 0.00 42.36 4.34
137 138 1.008194 GTGTGTGGCACGAGACGTA 60.008 57.895 13.77 0.00 38.32 3.57
138 139 1.008194 TGTGTGGCACGAGACGTAC 60.008 57.895 13.77 4.08 38.32 3.67
139 140 1.731969 GTGTGGCACGAGACGTACC 60.732 63.158 13.77 6.60 42.95 3.34
140 141 2.126189 GTGGCACGAGACGTACCC 60.126 66.667 0.00 8.19 42.06 3.69
141 142 2.598099 TGGCACGAGACGTACCCA 60.598 61.111 10.39 10.31 42.06 4.51
142 143 2.181021 GGCACGAGACGTACCCAG 59.819 66.667 2.57 0.00 37.32 4.45
143 144 2.181021 GCACGAGACGTACCCAGG 59.819 66.667 0.00 0.00 38.32 4.45
144 145 2.633509 GCACGAGACGTACCCAGGT 61.634 63.158 0.00 0.00 38.32 4.00
145 146 1.962144 CACGAGACGTACCCAGGTT 59.038 57.895 0.00 0.00 38.32 3.50
146 147 0.109412 CACGAGACGTACCCAGGTTC 60.109 60.000 0.00 0.00 38.32 3.62
147 148 1.136147 CGAGACGTACCCAGGTTCG 59.864 63.158 13.48 13.48 42.95 3.95
148 149 1.509923 GAGACGTACCCAGGTTCGG 59.490 63.158 18.29 3.07 41.90 4.30
170 171 3.306379 CTCCGGGGGAGGTAACAC 58.694 66.667 0.00 0.00 45.43 3.32
171 172 2.364780 CTCCGGGGGAGGTAACACC 61.365 68.421 0.00 0.00 45.43 4.16
179 180 1.493861 GGAGGTAACACCCCTAGTCC 58.506 60.000 0.00 0.00 42.26 3.85
180 181 1.008084 GGAGGTAACACCCCTAGTCCT 59.992 57.143 0.00 0.00 42.26 3.85
181 182 2.108970 GAGGTAACACCCCTAGTCCTG 58.891 57.143 0.00 0.00 39.75 3.86
182 183 0.540454 GGTAACACCCCTAGTCCTGC 59.460 60.000 0.00 0.00 30.04 4.85
183 184 0.540454 GTAACACCCCTAGTCCTGCC 59.460 60.000 0.00 0.00 0.00 4.85
184 185 0.974010 TAACACCCCTAGTCCTGCCG 60.974 60.000 0.00 0.00 0.00 5.69
185 186 2.363795 CACCCCTAGTCCTGCCGA 60.364 66.667 0.00 0.00 0.00 5.54
186 187 1.987855 CACCCCTAGTCCTGCCGAA 60.988 63.158 0.00 0.00 0.00 4.30
187 188 1.003051 ACCCCTAGTCCTGCCGAAT 59.997 57.895 0.00 0.00 0.00 3.34
188 189 1.338136 ACCCCTAGTCCTGCCGAATG 61.338 60.000 0.00 0.00 0.00 2.67
189 190 1.338136 CCCCTAGTCCTGCCGAATGT 61.338 60.000 0.00 0.00 0.00 2.71
190 191 1.410004 CCCTAGTCCTGCCGAATGTA 58.590 55.000 0.00 0.00 0.00 2.29
191 192 1.760613 CCCTAGTCCTGCCGAATGTAA 59.239 52.381 0.00 0.00 0.00 2.41
192 193 2.483188 CCCTAGTCCTGCCGAATGTAAC 60.483 54.545 0.00 0.00 0.00 2.50
193 194 2.431057 CCTAGTCCTGCCGAATGTAACT 59.569 50.000 0.00 0.00 0.00 2.24
194 195 3.118738 CCTAGTCCTGCCGAATGTAACTT 60.119 47.826 0.00 0.00 0.00 2.66
195 196 4.098960 CCTAGTCCTGCCGAATGTAACTTA 59.901 45.833 0.00 0.00 0.00 2.24
196 197 4.755266 AGTCCTGCCGAATGTAACTTAT 57.245 40.909 0.00 0.00 0.00 1.73
197 198 4.694339 AGTCCTGCCGAATGTAACTTATC 58.306 43.478 0.00 0.00 0.00 1.75
198 199 4.406003 AGTCCTGCCGAATGTAACTTATCT 59.594 41.667 0.00 0.00 0.00 1.98
199 200 5.597182 AGTCCTGCCGAATGTAACTTATCTA 59.403 40.000 0.00 0.00 0.00 1.98
200 201 6.097839 AGTCCTGCCGAATGTAACTTATCTAA 59.902 38.462 0.00 0.00 0.00 2.10
201 202 6.759827 GTCCTGCCGAATGTAACTTATCTAAA 59.240 38.462 0.00 0.00 0.00 1.85
202 203 7.279313 GTCCTGCCGAATGTAACTTATCTAAAA 59.721 37.037 0.00 0.00 0.00 1.52
203 204 7.279313 TCCTGCCGAATGTAACTTATCTAAAAC 59.721 37.037 0.00 0.00 0.00 2.43
204 205 7.065324 CCTGCCGAATGTAACTTATCTAAAACA 59.935 37.037 0.00 0.00 0.00 2.83
205 206 8.325421 TGCCGAATGTAACTTATCTAAAACAA 57.675 30.769 0.00 0.00 0.00 2.83
206 207 8.784994 TGCCGAATGTAACTTATCTAAAACAAA 58.215 29.630 0.00 0.00 0.00 2.83
207 208 9.615295 GCCGAATGTAACTTATCTAAAACAAAA 57.385 29.630 0.00 0.00 0.00 2.44
248 249 8.986477 AAATGGTAACTCTGATTTTAACATGC 57.014 30.769 9.33 0.00 36.06 4.06
249 250 7.944729 ATGGTAACTCTGATTTTAACATGCT 57.055 32.000 8.25 0.00 34.88 3.79
250 251 9.461312 AATGGTAACTCTGATTTTAACATGCTA 57.539 29.630 9.33 0.00 36.06 3.49
251 252 9.632638 ATGGTAACTCTGATTTTAACATGCTAT 57.367 29.630 8.25 0.00 34.88 2.97
252 253 8.892723 TGGTAACTCTGATTTTAACATGCTATG 58.107 33.333 0.00 0.00 37.61 2.23
257 258 9.836864 ACTCTGATTTTAACATGCTATGTATGA 57.163 29.630 0.00 0.00 44.07 2.15
343 344 6.417726 CAAAATATTGTTTTTGGCGCAAAC 57.582 33.333 10.83 12.37 41.00 2.93
344 345 6.197981 CAAAATATTGTTTTTGGCGCAAACT 58.802 32.000 18.88 6.22 41.00 2.66
345 346 4.988708 ATATTGTTTTTGGCGCAAACTG 57.011 36.364 18.88 0.00 35.50 3.16
346 347 2.370281 TTGTTTTTGGCGCAAACTGA 57.630 40.000 18.88 8.26 35.50 3.41
347 348 2.370281 TGTTTTTGGCGCAAACTGAA 57.630 40.000 18.88 0.16 35.50 3.02
348 349 2.898705 TGTTTTTGGCGCAAACTGAAT 58.101 38.095 18.88 0.00 35.50 2.57
349 350 2.863137 TGTTTTTGGCGCAAACTGAATC 59.137 40.909 18.88 3.27 35.50 2.52
350 351 3.123050 GTTTTTGGCGCAAACTGAATCT 58.877 40.909 10.83 0.00 32.79 2.40
351 352 4.202060 TGTTTTTGGCGCAAACTGAATCTA 60.202 37.500 18.88 0.00 35.50 1.98
352 353 4.782019 TTTTGGCGCAAACTGAATCTAT 57.218 36.364 10.83 0.00 32.79 1.98
353 354 5.888691 TTTTGGCGCAAACTGAATCTATA 57.111 34.783 10.83 0.00 32.79 1.31
354 355 5.484173 TTTGGCGCAAACTGAATCTATAG 57.516 39.130 10.83 0.00 0.00 1.31
355 356 4.137116 TGGCGCAAACTGAATCTATAGT 57.863 40.909 10.83 0.00 0.00 2.12
356 357 3.871006 TGGCGCAAACTGAATCTATAGTG 59.129 43.478 10.83 0.00 0.00 2.74
357 358 3.303395 GGCGCAAACTGAATCTATAGTGC 60.303 47.826 10.83 0.00 0.00 4.40
358 359 3.309682 GCGCAAACTGAATCTATAGTGCA 59.690 43.478 0.30 0.00 0.00 4.57
359 360 4.783450 GCGCAAACTGAATCTATAGTGCAC 60.783 45.833 9.40 9.40 0.00 4.57
360 361 4.548916 CGCAAACTGAATCTATAGTGCACG 60.549 45.833 12.01 0.00 0.00 5.34
361 362 4.260375 GCAAACTGAATCTATAGTGCACGG 60.260 45.833 12.01 3.58 0.00 4.94
362 363 4.737855 AACTGAATCTATAGTGCACGGT 57.262 40.909 12.01 6.73 0.00 4.83
363 364 4.308899 ACTGAATCTATAGTGCACGGTC 57.691 45.455 12.01 3.16 0.00 4.79
364 365 3.954904 ACTGAATCTATAGTGCACGGTCT 59.045 43.478 12.01 0.00 0.00 3.85
365 366 5.131067 ACTGAATCTATAGTGCACGGTCTA 58.869 41.667 12.01 0.00 0.00 2.59
366 367 5.770663 ACTGAATCTATAGTGCACGGTCTAT 59.229 40.000 12.01 6.39 0.00 1.98
367 368 6.072397 ACTGAATCTATAGTGCACGGTCTATC 60.072 42.308 12.01 6.84 0.00 2.08
368 369 6.004574 TGAATCTATAGTGCACGGTCTATCT 58.995 40.000 12.01 0.00 0.00 1.98
369 370 6.490381 TGAATCTATAGTGCACGGTCTATCTT 59.510 38.462 12.01 0.00 0.00 2.40
370 371 6.902771 ATCTATAGTGCACGGTCTATCTTT 57.097 37.500 12.01 0.00 0.00 2.52
371 372 6.315091 TCTATAGTGCACGGTCTATCTTTC 57.685 41.667 12.01 0.00 0.00 2.62
372 373 2.279582 AGTGCACGGTCTATCTTTCG 57.720 50.000 12.01 0.00 0.00 3.46
373 374 1.544691 AGTGCACGGTCTATCTTTCGT 59.455 47.619 12.01 0.00 36.19 3.85
374 375 2.751259 AGTGCACGGTCTATCTTTCGTA 59.249 45.455 12.01 0.00 34.31 3.43
375 376 3.380637 AGTGCACGGTCTATCTTTCGTAT 59.619 43.478 12.01 0.00 34.31 3.06
376 377 3.729716 GTGCACGGTCTATCTTTCGTATC 59.270 47.826 0.00 0.00 34.31 2.24
377 378 2.971915 GCACGGTCTATCTTTCGTATCG 59.028 50.000 0.00 0.00 34.31 2.92
378 379 2.971915 CACGGTCTATCTTTCGTATCGC 59.028 50.000 0.00 0.00 34.31 4.58
379 380 2.231693 CGGTCTATCTTTCGTATCGCG 58.768 52.381 0.00 0.00 43.01 5.87
380 381 2.582687 GGTCTATCTTTCGTATCGCGG 58.417 52.381 6.13 0.00 41.72 6.46
381 382 1.977412 GTCTATCTTTCGTATCGCGGC 59.023 52.381 6.13 0.00 41.72 6.53
382 383 0.975544 CTATCTTTCGTATCGCGGCG 59.024 55.000 17.70 17.70 41.72 6.46
383 384 0.587768 TATCTTTCGTATCGCGGCGA 59.412 50.000 28.46 28.46 41.72 5.54
385 386 0.659417 TCTTTCGTATCGCGGCGATC 60.659 55.000 37.58 26.49 43.45 3.69
386 387 1.606350 CTTTCGTATCGCGGCGATCC 61.606 60.000 37.58 27.13 43.45 3.36
387 388 2.339100 TTTCGTATCGCGGCGATCCA 62.339 55.000 37.58 21.30 43.45 3.41
388 389 2.339100 TTCGTATCGCGGCGATCCAA 62.339 55.000 37.58 25.06 43.45 3.53
389 390 2.645510 CGTATCGCGGCGATCCAAC 61.646 63.158 37.58 28.32 43.45 3.77
390 391 1.299926 GTATCGCGGCGATCCAACT 60.300 57.895 37.58 19.13 43.45 3.16
391 392 0.874607 GTATCGCGGCGATCCAACTT 60.875 55.000 37.58 18.40 43.45 2.66
392 393 0.179094 TATCGCGGCGATCCAACTTT 60.179 50.000 37.58 17.66 43.45 2.66
393 394 1.024579 ATCGCGGCGATCCAACTTTT 61.025 50.000 30.34 7.81 43.45 2.27
394 395 0.390078 TCGCGGCGATCCAACTTTTA 60.390 50.000 22.69 0.00 0.00 1.52
395 396 0.444651 CGCGGCGATCCAACTTTTAA 59.555 50.000 19.16 0.00 0.00 1.52
396 397 1.135916 CGCGGCGATCCAACTTTTAAA 60.136 47.619 19.16 0.00 0.00 1.52
397 398 2.477189 CGCGGCGATCCAACTTTTAAAT 60.477 45.455 19.16 0.00 0.00 1.40
398 399 3.242478 CGCGGCGATCCAACTTTTAAATA 60.242 43.478 19.16 0.00 0.00 1.40
399 400 4.664188 GCGGCGATCCAACTTTTAAATAA 58.336 39.130 12.98 0.00 0.00 1.40
400 401 5.096849 GCGGCGATCCAACTTTTAAATAAA 58.903 37.500 12.98 0.00 0.00 1.40
401 402 5.004061 GCGGCGATCCAACTTTTAAATAAAC 59.996 40.000 12.98 0.00 0.00 2.01
402 403 6.087522 CGGCGATCCAACTTTTAAATAAACA 58.912 36.000 0.00 0.00 0.00 2.83
403 404 6.033091 CGGCGATCCAACTTTTAAATAAACAC 59.967 38.462 0.00 0.00 0.00 3.32
404 405 6.309494 GGCGATCCAACTTTTAAATAAACACC 59.691 38.462 0.00 0.00 0.00 4.16
405 406 6.309494 GCGATCCAACTTTTAAATAAACACCC 59.691 38.462 0.00 0.00 0.00 4.61
406 407 7.371936 CGATCCAACTTTTAAATAAACACCCA 58.628 34.615 0.00 0.00 0.00 4.51
407 408 8.032451 CGATCCAACTTTTAAATAAACACCCAT 58.968 33.333 0.00 0.00 0.00 4.00
408 409 9.719355 GATCCAACTTTTAAATAAACACCCATT 57.281 29.630 0.00 0.00 0.00 3.16
420 421 9.500785 AAATAAACACCCATTAAAACCAGATTG 57.499 29.630 0.00 0.00 0.00 2.67
421 422 6.739331 AAACACCCATTAAAACCAGATTGA 57.261 33.333 0.00 0.00 0.00 2.57
422 423 5.982890 ACACCCATTAAAACCAGATTGAG 57.017 39.130 0.00 0.00 0.00 3.02
423 424 4.220602 ACACCCATTAAAACCAGATTGAGC 59.779 41.667 0.00 0.00 0.00 4.26
424 425 3.443681 ACCCATTAAAACCAGATTGAGCG 59.556 43.478 0.00 0.00 0.00 5.03
425 426 3.181487 CCCATTAAAACCAGATTGAGCGG 60.181 47.826 0.00 0.00 0.00 5.52
426 427 3.694072 CCATTAAAACCAGATTGAGCGGA 59.306 43.478 0.00 0.00 0.00 5.54
427 428 4.157656 CCATTAAAACCAGATTGAGCGGAA 59.842 41.667 0.00 0.00 0.00 4.30
428 429 5.336372 CCATTAAAACCAGATTGAGCGGAAA 60.336 40.000 0.00 0.00 0.00 3.13
429 430 3.923017 AAAACCAGATTGAGCGGAAAG 57.077 42.857 0.00 0.00 0.00 2.62
430 431 2.859165 AACCAGATTGAGCGGAAAGA 57.141 45.000 0.00 0.00 0.00 2.52
431 432 2.859165 ACCAGATTGAGCGGAAAGAA 57.141 45.000 0.00 0.00 0.00 2.52
432 433 3.140325 ACCAGATTGAGCGGAAAGAAA 57.860 42.857 0.00 0.00 0.00 2.52
433 434 3.486383 ACCAGATTGAGCGGAAAGAAAA 58.514 40.909 0.00 0.00 0.00 2.29
434 435 3.253432 ACCAGATTGAGCGGAAAGAAAAC 59.747 43.478 0.00 0.00 0.00 2.43
435 436 3.253188 CCAGATTGAGCGGAAAGAAAACA 59.747 43.478 0.00 0.00 0.00 2.83
436 437 4.082571 CCAGATTGAGCGGAAAGAAAACAT 60.083 41.667 0.00 0.00 0.00 2.71
437 438 5.091431 CAGATTGAGCGGAAAGAAAACATC 58.909 41.667 0.00 0.00 0.00 3.06
438 439 4.761739 AGATTGAGCGGAAAGAAAACATCA 59.238 37.500 0.00 0.00 0.00 3.07
439 440 4.909696 TTGAGCGGAAAGAAAACATCAA 57.090 36.364 0.00 0.00 0.00 2.57
440 441 5.452078 TTGAGCGGAAAGAAAACATCAAT 57.548 34.783 0.00 0.00 0.00 2.57
441 442 6.567687 TTGAGCGGAAAGAAAACATCAATA 57.432 33.333 0.00 0.00 0.00 1.90
442 443 6.567687 TGAGCGGAAAGAAAACATCAATAA 57.432 33.333 0.00 0.00 0.00 1.40
443 444 6.378582 TGAGCGGAAAGAAAACATCAATAAC 58.621 36.000 0.00 0.00 0.00 1.89
444 445 5.709966 AGCGGAAAGAAAACATCAATAACC 58.290 37.500 0.00 0.00 0.00 2.85
445 446 5.242838 AGCGGAAAGAAAACATCAATAACCA 59.757 36.000 0.00 0.00 0.00 3.67
446 447 5.344933 GCGGAAAGAAAACATCAATAACCAC 59.655 40.000 0.00 0.00 0.00 4.16
447 448 6.442952 CGGAAAGAAAACATCAATAACCACA 58.557 36.000 0.00 0.00 0.00 4.17
448 449 6.362283 CGGAAAGAAAACATCAATAACCACAC 59.638 38.462 0.00 0.00 0.00 3.82
449 450 7.206687 GGAAAGAAAACATCAATAACCACACA 58.793 34.615 0.00 0.00 0.00 3.72
450 451 7.872483 GGAAAGAAAACATCAATAACCACACAT 59.128 33.333 0.00 0.00 0.00 3.21
451 452 8.592105 AAAGAAAACATCAATAACCACACATG 57.408 30.769 0.00 0.00 0.00 3.21
452 453 7.523293 AGAAAACATCAATAACCACACATGA 57.477 32.000 0.00 0.00 0.00 3.07
453 454 7.950512 AGAAAACATCAATAACCACACATGAA 58.049 30.769 0.00 0.00 0.00 2.57
454 455 7.867403 AGAAAACATCAATAACCACACATGAAC 59.133 33.333 0.00 0.00 0.00 3.18
455 456 6.647334 AACATCAATAACCACACATGAACA 57.353 33.333 0.00 0.00 0.00 3.18
456 457 6.012658 ACATCAATAACCACACATGAACAC 57.987 37.500 0.00 0.00 0.00 3.32
457 458 5.048083 ACATCAATAACCACACATGAACACC 60.048 40.000 0.00 0.00 0.00 4.16
458 459 4.724399 TCAATAACCACACATGAACACCT 58.276 39.130 0.00 0.00 0.00 4.00
459 460 4.759693 TCAATAACCACACATGAACACCTC 59.240 41.667 0.00 0.00 0.00 3.85
460 461 4.640771 ATAACCACACATGAACACCTCT 57.359 40.909 0.00 0.00 0.00 3.69
461 462 2.260844 ACCACACATGAACACCTCTG 57.739 50.000 0.00 0.00 0.00 3.35
462 463 1.768275 ACCACACATGAACACCTCTGA 59.232 47.619 0.00 0.00 0.00 3.27
463 464 2.172505 ACCACACATGAACACCTCTGAA 59.827 45.455 0.00 0.00 0.00 3.02
464 465 3.213506 CCACACATGAACACCTCTGAAA 58.786 45.455 0.00 0.00 0.00 2.69
465 466 3.631686 CCACACATGAACACCTCTGAAAA 59.368 43.478 0.00 0.00 0.00 2.29
466 467 4.279169 CCACACATGAACACCTCTGAAAAT 59.721 41.667 0.00 0.00 0.00 1.82
467 468 5.473162 CCACACATGAACACCTCTGAAAATA 59.527 40.000 0.00 0.00 0.00 1.40
468 469 6.373779 CACACATGAACACCTCTGAAAATAC 58.626 40.000 0.00 0.00 0.00 1.89
469 470 6.205464 CACACATGAACACCTCTGAAAATACT 59.795 38.462 0.00 0.00 0.00 2.12
470 471 7.387673 CACACATGAACACCTCTGAAAATACTA 59.612 37.037 0.00 0.00 0.00 1.82
471 472 8.103305 ACACATGAACACCTCTGAAAATACTAT 58.897 33.333 0.00 0.00 0.00 2.12
472 473 8.393366 CACATGAACACCTCTGAAAATACTATG 58.607 37.037 0.00 0.00 0.00 2.23
473 474 6.985188 TGAACACCTCTGAAAATACTATGC 57.015 37.500 0.00 0.00 0.00 3.14
474 475 5.580691 TGAACACCTCTGAAAATACTATGCG 59.419 40.000 0.00 0.00 0.00 4.73
475 476 5.339008 ACACCTCTGAAAATACTATGCGA 57.661 39.130 0.00 0.00 0.00 5.10
476 477 5.352284 ACACCTCTGAAAATACTATGCGAG 58.648 41.667 0.00 0.00 0.00 5.03
477 478 4.747108 CACCTCTGAAAATACTATGCGAGG 59.253 45.833 0.00 0.00 41.85 4.63
478 479 4.202264 ACCTCTGAAAATACTATGCGAGGG 60.202 45.833 0.00 0.00 40.75 4.30
479 480 4.039245 CCTCTGAAAATACTATGCGAGGGA 59.961 45.833 0.00 0.00 34.58 4.20
480 481 5.453339 CCTCTGAAAATACTATGCGAGGGAA 60.453 44.000 0.00 0.00 34.58 3.97
481 482 5.984725 TCTGAAAATACTATGCGAGGGAAA 58.015 37.500 0.00 0.00 0.00 3.13
482 483 5.815740 TCTGAAAATACTATGCGAGGGAAAC 59.184 40.000 0.00 0.00 0.00 2.78
483 484 5.492895 TGAAAATACTATGCGAGGGAAACA 58.507 37.500 0.00 0.00 0.00 2.83
484 485 5.941058 TGAAAATACTATGCGAGGGAAACAA 59.059 36.000 0.00 0.00 0.00 2.83
485 486 5.813080 AAATACTATGCGAGGGAAACAAC 57.187 39.130 0.00 0.00 0.00 3.32
486 487 2.851263 ACTATGCGAGGGAAACAACA 57.149 45.000 0.00 0.00 0.00 3.33
487 488 3.350219 ACTATGCGAGGGAAACAACAT 57.650 42.857 0.00 0.00 0.00 2.71
488 489 4.481368 ACTATGCGAGGGAAACAACATA 57.519 40.909 0.00 0.00 0.00 2.29
489 490 5.036117 ACTATGCGAGGGAAACAACATAT 57.964 39.130 0.00 0.00 0.00 1.78
490 491 5.437060 ACTATGCGAGGGAAACAACATATT 58.563 37.500 0.00 0.00 0.00 1.28
491 492 5.885912 ACTATGCGAGGGAAACAACATATTT 59.114 36.000 0.00 0.00 0.00 1.40
492 493 7.051623 ACTATGCGAGGGAAACAACATATTTA 58.948 34.615 0.00 0.00 0.00 1.40
493 494 6.959639 ATGCGAGGGAAACAACATATTTAT 57.040 33.333 0.00 0.00 0.00 1.40
494 495 6.371809 TGCGAGGGAAACAACATATTTATC 57.628 37.500 0.00 0.00 0.00 1.75
495 496 5.883115 TGCGAGGGAAACAACATATTTATCA 59.117 36.000 0.00 0.00 0.00 2.15
496 497 6.545666 TGCGAGGGAAACAACATATTTATCAT 59.454 34.615 0.00 0.00 0.00 2.45
497 498 7.078228 GCGAGGGAAACAACATATTTATCATC 58.922 38.462 0.00 0.00 0.00 2.92
498 499 7.041098 GCGAGGGAAACAACATATTTATCATCT 60.041 37.037 0.00 0.00 0.00 2.90
499 500 8.840321 CGAGGGAAACAACATATTTATCATCTT 58.160 33.333 0.00 0.00 0.00 2.40
514 515 8.926092 TTTATCATCTTATTCGGAGAGAGAGA 57.074 34.615 0.00 0.00 38.43 3.10
515 516 8.560355 TTATCATCTTATTCGGAGAGAGAGAG 57.440 38.462 0.00 0.00 38.43 3.20
516 517 5.312895 TCATCTTATTCGGAGAGAGAGAGG 58.687 45.833 0.00 0.00 38.43 3.69
517 518 5.072464 TCATCTTATTCGGAGAGAGAGAGGA 59.928 44.000 0.00 0.00 38.43 3.71
518 519 4.710324 TCTTATTCGGAGAGAGAGAGGAC 58.290 47.826 0.00 0.00 38.43 3.85
519 520 4.164413 TCTTATTCGGAGAGAGAGAGGACA 59.836 45.833 0.00 0.00 38.43 4.02
520 521 2.881111 TTCGGAGAGAGAGAGGACAA 57.119 50.000 0.00 0.00 38.43 3.18
521 522 3.374042 TTCGGAGAGAGAGAGGACAAT 57.626 47.619 0.00 0.00 38.43 2.71
522 523 2.649190 TCGGAGAGAGAGAGGACAATG 58.351 52.381 0.00 0.00 0.00 2.82
523 524 2.239907 TCGGAGAGAGAGAGGACAATGA 59.760 50.000 0.00 0.00 0.00 2.57
524 525 2.357637 CGGAGAGAGAGAGGACAATGAC 59.642 54.545 0.00 0.00 0.00 3.06
525 526 3.631250 GGAGAGAGAGAGGACAATGACT 58.369 50.000 0.00 0.00 0.00 3.41
526 527 4.023291 GGAGAGAGAGAGGACAATGACTT 58.977 47.826 0.00 0.00 0.00 3.01
527 528 5.197451 GGAGAGAGAGAGGACAATGACTTA 58.803 45.833 0.00 0.00 0.00 2.24
528 529 5.299279 GGAGAGAGAGAGGACAATGACTTAG 59.701 48.000 0.00 0.00 0.00 2.18
529 530 5.200483 AGAGAGAGAGGACAATGACTTAGG 58.800 45.833 0.00 0.00 0.00 2.69
530 531 5.044476 AGAGAGAGAGGACAATGACTTAGGA 60.044 44.000 0.00 0.00 0.00 2.94
531 532 4.953579 AGAGAGAGGACAATGACTTAGGAC 59.046 45.833 0.00 0.00 0.00 3.85
532 533 4.941713 AGAGAGGACAATGACTTAGGACT 58.058 43.478 0.00 0.00 0.00 3.85
533 534 4.709397 AGAGAGGACAATGACTTAGGACTG 59.291 45.833 0.00 0.00 0.00 3.51
534 535 4.678256 AGAGGACAATGACTTAGGACTGA 58.322 43.478 0.00 0.00 0.00 3.41
535 536 4.464597 AGAGGACAATGACTTAGGACTGAC 59.535 45.833 0.00 0.00 0.00 3.51
536 537 3.515901 AGGACAATGACTTAGGACTGACC 59.484 47.826 0.00 0.00 39.35 4.02
537 538 3.260884 GGACAATGACTTAGGACTGACCA 59.739 47.826 0.00 0.00 42.04 4.02
538 539 4.262894 GGACAATGACTTAGGACTGACCAA 60.263 45.833 0.00 0.00 42.04 3.67
539 540 5.491982 GACAATGACTTAGGACTGACCAAT 58.508 41.667 0.00 0.00 42.04 3.16
540 541 6.351881 GGACAATGACTTAGGACTGACCAATA 60.352 42.308 0.00 0.00 42.04 1.90
541 542 6.644347 ACAATGACTTAGGACTGACCAATAG 58.356 40.000 0.00 0.00 42.04 1.73
542 543 4.737855 TGACTTAGGACTGACCAATAGC 57.262 45.455 0.00 0.00 42.04 2.97
543 544 3.451178 TGACTTAGGACTGACCAATAGCC 59.549 47.826 0.00 0.00 42.04 3.93
544 545 3.450904 ACTTAGGACTGACCAATAGCCA 58.549 45.455 0.00 0.00 42.04 4.75
545 546 4.040755 ACTTAGGACTGACCAATAGCCAT 58.959 43.478 0.00 0.00 42.04 4.40
546 547 5.216622 ACTTAGGACTGACCAATAGCCATA 58.783 41.667 0.00 0.00 42.04 2.74
547 548 5.070580 ACTTAGGACTGACCAATAGCCATAC 59.929 44.000 0.00 0.00 42.04 2.39
548 549 3.658725 AGGACTGACCAATAGCCATACT 58.341 45.455 0.00 0.00 42.04 2.12
549 550 3.389329 AGGACTGACCAATAGCCATACTG 59.611 47.826 0.00 0.00 42.04 2.74
550 551 3.388024 GGACTGACCAATAGCCATACTGA 59.612 47.826 0.00 0.00 38.79 3.41
551 552 4.141711 GGACTGACCAATAGCCATACTGAA 60.142 45.833 0.00 0.00 38.79 3.02
552 553 5.028549 ACTGACCAATAGCCATACTGAAG 57.971 43.478 0.00 0.00 0.00 3.02
553 554 3.808728 TGACCAATAGCCATACTGAAGC 58.191 45.455 0.00 0.00 0.00 3.86
554 555 3.142174 GACCAATAGCCATACTGAAGCC 58.858 50.000 0.00 0.00 0.00 4.35
555 556 2.509548 ACCAATAGCCATACTGAAGCCA 59.490 45.455 0.00 0.00 0.00 4.75
556 557 2.880890 CCAATAGCCATACTGAAGCCAC 59.119 50.000 0.00 0.00 0.00 5.01
557 558 2.533266 ATAGCCATACTGAAGCCACG 57.467 50.000 0.00 0.00 0.00 4.94
558 559 1.191535 TAGCCATACTGAAGCCACGT 58.808 50.000 0.00 0.00 0.00 4.49
559 560 0.108138 AGCCATACTGAAGCCACGTC 60.108 55.000 0.00 0.00 0.00 4.34
560 561 1.090052 GCCATACTGAAGCCACGTCC 61.090 60.000 0.00 0.00 0.00 4.79
561 562 0.462047 CCATACTGAAGCCACGTCCC 60.462 60.000 0.00 0.00 0.00 4.46
562 563 0.806102 CATACTGAAGCCACGTCCCG 60.806 60.000 0.00 0.00 0.00 5.14
563 564 0.968901 ATACTGAAGCCACGTCCCGA 60.969 55.000 0.00 0.00 0.00 5.14
564 565 1.592400 TACTGAAGCCACGTCCCGAG 61.592 60.000 0.00 0.00 0.00 4.63
565 566 4.373116 TGAAGCCACGTCCCGAGC 62.373 66.667 0.00 0.00 0.00 5.03
570 571 4.308458 CCACGTCCCGAGCCAACA 62.308 66.667 0.00 0.00 0.00 3.33
571 572 2.280524 CACGTCCCGAGCCAACAA 60.281 61.111 0.00 0.00 0.00 2.83
572 573 2.280592 ACGTCCCGAGCCAACAAC 60.281 61.111 0.00 0.00 0.00 3.32
573 574 2.280524 CGTCCCGAGCCAACAACA 60.281 61.111 0.00 0.00 0.00 3.33
574 575 1.671054 CGTCCCGAGCCAACAACAT 60.671 57.895 0.00 0.00 0.00 2.71
575 576 1.234615 CGTCCCGAGCCAACAACATT 61.235 55.000 0.00 0.00 0.00 2.71
576 577 0.240945 GTCCCGAGCCAACAACATTG 59.759 55.000 0.00 0.00 0.00 2.82
577 578 0.893270 TCCCGAGCCAACAACATTGG 60.893 55.000 1.12 1.12 42.37 3.16
578 579 1.178534 CCCGAGCCAACAACATTGGT 61.179 55.000 7.48 0.00 41.53 3.67
579 580 1.529226 CCGAGCCAACAACATTGGTA 58.471 50.000 7.48 0.00 41.53 3.25
580 581 1.199097 CCGAGCCAACAACATTGGTAC 59.801 52.381 7.48 1.92 41.53 3.34
581 582 1.876799 CGAGCCAACAACATTGGTACA 59.123 47.619 7.48 0.00 41.53 2.90
582 583 2.095768 CGAGCCAACAACATTGGTACAG 60.096 50.000 7.48 0.00 42.39 2.74
583 584 2.884639 GAGCCAACAACATTGGTACAGT 59.115 45.455 7.48 0.00 42.39 3.55
595 596 4.359434 TTGGTACAGTGCCAAATAGTGA 57.641 40.909 19.94 0.00 42.39 3.41
596 597 4.568072 TGGTACAGTGCCAAATAGTGAT 57.432 40.909 8.12 0.00 32.29 3.06
597 598 4.513442 TGGTACAGTGCCAAATAGTGATC 58.487 43.478 8.12 0.00 32.29 2.92
598 599 4.225042 TGGTACAGTGCCAAATAGTGATCT 59.775 41.667 8.12 0.00 32.29 2.75
599 600 5.186198 GGTACAGTGCCAAATAGTGATCTT 58.814 41.667 2.13 0.00 0.00 2.40
600 601 5.065218 GGTACAGTGCCAAATAGTGATCTTG 59.935 44.000 2.13 0.00 0.00 3.02
601 602 4.655963 ACAGTGCCAAATAGTGATCTTGT 58.344 39.130 0.00 0.00 0.00 3.16
602 603 5.804639 ACAGTGCCAAATAGTGATCTTGTA 58.195 37.500 0.00 0.00 0.00 2.41
603 604 5.877012 ACAGTGCCAAATAGTGATCTTGTAG 59.123 40.000 0.00 0.00 0.00 2.74
604 605 4.878397 AGTGCCAAATAGTGATCTTGTAGC 59.122 41.667 0.00 0.00 0.00 3.58
605 606 4.878397 GTGCCAAATAGTGATCTTGTAGCT 59.122 41.667 0.00 0.00 0.00 3.32
606 607 6.049149 GTGCCAAATAGTGATCTTGTAGCTA 58.951 40.000 0.00 0.00 0.00 3.32
607 608 6.018669 GTGCCAAATAGTGATCTTGTAGCTAC 60.019 42.308 17.30 17.30 0.00 3.58
608 609 6.049149 GCCAAATAGTGATCTTGTAGCTACA 58.951 40.000 22.67 22.67 0.00 2.74
609 610 6.201806 GCCAAATAGTGATCTTGTAGCTACAG 59.798 42.308 24.79 18.62 37.52 2.74
610 611 6.201806 CCAAATAGTGATCTTGTAGCTACAGC 59.798 42.308 24.79 16.18 37.52 4.40
611 612 3.810310 AGTGATCTTGTAGCTACAGCC 57.190 47.619 24.79 15.61 43.38 4.85
612 613 3.099905 AGTGATCTTGTAGCTACAGCCA 58.900 45.455 24.79 17.64 43.38 4.75
613 614 3.515502 AGTGATCTTGTAGCTACAGCCAA 59.484 43.478 24.79 10.86 43.38 4.52
614 615 3.619038 GTGATCTTGTAGCTACAGCCAAC 59.381 47.826 24.79 16.74 43.38 3.77
615 616 2.363788 TCTTGTAGCTACAGCCAACG 57.636 50.000 24.79 11.45 43.38 4.10
616 617 1.890489 TCTTGTAGCTACAGCCAACGA 59.110 47.619 24.79 13.26 43.38 3.85
617 618 2.297880 TCTTGTAGCTACAGCCAACGAA 59.702 45.455 24.79 8.39 43.38 3.85
618 619 2.363788 TGTAGCTACAGCCAACGAAG 57.636 50.000 22.67 0.00 43.38 3.79
619 620 1.616865 TGTAGCTACAGCCAACGAAGT 59.383 47.619 22.67 0.00 43.87 3.01
620 621 2.821378 TGTAGCTACAGCCAACGAAGTA 59.179 45.455 22.67 0.00 41.36 2.24
621 622 3.446161 TGTAGCTACAGCCAACGAAGTAT 59.554 43.478 22.67 0.00 41.36 2.12
622 623 3.166489 AGCTACAGCCAACGAAGTATC 57.834 47.619 0.00 0.00 41.36 2.24
623 624 2.496070 AGCTACAGCCAACGAAGTATCA 59.504 45.455 0.00 0.00 41.36 2.15
624 625 2.860735 GCTACAGCCAACGAAGTATCAG 59.139 50.000 0.00 0.00 35.06 2.90
625 626 1.726853 ACAGCCAACGAAGTATCAGC 58.273 50.000 0.00 0.00 45.00 4.26
626 627 1.009829 CAGCCAACGAAGTATCAGCC 58.990 55.000 0.00 0.00 45.00 4.85
627 628 0.460284 AGCCAACGAAGTATCAGCCG 60.460 55.000 0.00 0.00 45.00 5.52
628 629 1.429148 GCCAACGAAGTATCAGCCGG 61.429 60.000 0.00 0.00 45.00 6.13
629 630 1.429148 CCAACGAAGTATCAGCCGGC 61.429 60.000 21.89 21.89 45.00 6.13
630 631 1.153429 AACGAAGTATCAGCCGGCC 60.153 57.895 26.15 7.28 45.00 6.13
631 632 1.895020 AACGAAGTATCAGCCGGCCA 61.895 55.000 26.15 11.22 45.00 5.36
632 633 1.883084 CGAAGTATCAGCCGGCCAC 60.883 63.158 26.15 16.24 0.00 5.01
633 634 1.883084 GAAGTATCAGCCGGCCACG 60.883 63.158 26.15 12.84 40.55 4.94
634 635 2.573609 GAAGTATCAGCCGGCCACGT 62.574 60.000 26.15 14.37 38.78 4.49
635 636 2.573609 AAGTATCAGCCGGCCACGTC 62.574 60.000 26.15 11.71 38.78 4.34
636 637 3.845259 TATCAGCCGGCCACGTCC 61.845 66.667 26.15 0.00 38.78 4.79
657 658 4.564110 GCCATGGCCCCGGTAGTC 62.564 72.222 27.24 0.00 34.56 2.59
658 659 2.768344 CCATGGCCCCGGTAGTCT 60.768 66.667 0.00 0.00 0.00 3.24
659 660 2.505982 CATGGCCCCGGTAGTCTG 59.494 66.667 0.00 0.00 0.00 3.51
660 661 2.063979 CATGGCCCCGGTAGTCTGA 61.064 63.158 0.00 0.00 0.00 3.27
661 662 1.306654 ATGGCCCCGGTAGTCTGAA 60.307 57.895 0.00 0.00 0.00 3.02
662 663 1.338136 ATGGCCCCGGTAGTCTGAAG 61.338 60.000 0.00 0.00 0.00 3.02
663 664 2.732619 GGCCCCGGTAGTCTGAAGG 61.733 68.421 0.00 0.00 0.00 3.46
664 665 1.988406 GCCCCGGTAGTCTGAAGGT 60.988 63.158 0.00 0.00 0.00 3.50
665 666 1.551019 GCCCCGGTAGTCTGAAGGTT 61.551 60.000 0.00 0.00 0.00 3.50
666 667 0.249398 CCCCGGTAGTCTGAAGGTTG 59.751 60.000 0.00 0.00 0.00 3.77
667 668 0.974383 CCCGGTAGTCTGAAGGTTGT 59.026 55.000 0.00 0.00 0.00 3.32
668 669 1.337823 CCCGGTAGTCTGAAGGTTGTG 60.338 57.143 0.00 0.00 0.00 3.33
669 670 1.343465 CCGGTAGTCTGAAGGTTGTGT 59.657 52.381 0.00 0.00 0.00 3.72
670 671 2.404215 CGGTAGTCTGAAGGTTGTGTG 58.596 52.381 0.00 0.00 0.00 3.82
671 672 2.035449 CGGTAGTCTGAAGGTTGTGTGA 59.965 50.000 0.00 0.00 0.00 3.58
672 673 3.654414 GGTAGTCTGAAGGTTGTGTGAG 58.346 50.000 0.00 0.00 0.00 3.51
673 674 2.246719 AGTCTGAAGGTTGTGTGAGC 57.753 50.000 0.00 0.00 0.00 4.26
674 675 1.486310 AGTCTGAAGGTTGTGTGAGCA 59.514 47.619 0.00 0.00 0.00 4.26
675 676 1.599542 GTCTGAAGGTTGTGTGAGCAC 59.400 52.381 0.00 0.00 45.44 4.40
676 677 0.947244 CTGAAGGTTGTGTGAGCACC 59.053 55.000 0.00 0.00 44.65 5.01
677 678 0.813610 TGAAGGTTGTGTGAGCACCG 60.814 55.000 0.00 0.00 44.65 4.94
678 679 0.531974 GAAGGTTGTGTGAGCACCGA 60.532 55.000 0.00 0.00 44.65 4.69
679 680 0.532862 AAGGTTGTGTGAGCACCGAG 60.533 55.000 0.00 0.00 44.65 4.63
680 681 1.961277 GGTTGTGTGAGCACCGAGG 60.961 63.158 0.00 0.00 44.65 4.63
681 682 1.227556 GTTGTGTGAGCACCGAGGT 60.228 57.895 0.00 0.00 44.65 3.85
682 683 1.069090 TTGTGTGAGCACCGAGGTC 59.931 57.895 0.00 0.86 44.65 3.85
687 688 2.125753 GAGCACCGAGGTCAGCTG 60.126 66.667 7.63 7.63 44.14 4.24
688 689 2.919856 AGCACCGAGGTCAGCTGT 60.920 61.111 14.67 0.00 35.72 4.40
689 690 2.031163 GCACCGAGGTCAGCTGTT 59.969 61.111 14.67 0.29 0.00 3.16
690 691 2.320587 GCACCGAGGTCAGCTGTTG 61.321 63.158 14.67 0.00 0.00 3.33
691 692 2.031163 ACCGAGGTCAGCTGTTGC 59.969 61.111 14.67 5.41 40.05 4.17
692 693 2.743928 CCGAGGTCAGCTGTTGCC 60.744 66.667 14.67 14.24 40.80 4.52
693 694 2.031012 CGAGGTCAGCTGTTGCCA 59.969 61.111 14.67 0.00 40.80 4.92
694 695 1.376424 CGAGGTCAGCTGTTGCCAT 60.376 57.895 14.67 5.27 40.80 4.40
695 696 0.108186 CGAGGTCAGCTGTTGCCATA 60.108 55.000 14.67 0.00 40.80 2.74
696 697 1.473965 CGAGGTCAGCTGTTGCCATAT 60.474 52.381 14.67 0.00 40.80 1.78
697 698 1.945394 GAGGTCAGCTGTTGCCATATG 59.055 52.381 14.67 0.00 40.80 1.78
698 699 1.561076 AGGTCAGCTGTTGCCATATGA 59.439 47.619 14.67 0.00 40.80 2.15
699 700 2.025981 AGGTCAGCTGTTGCCATATGAA 60.026 45.455 14.67 0.00 40.80 2.57
700 701 2.754552 GGTCAGCTGTTGCCATATGAAA 59.245 45.455 14.67 0.00 40.80 2.69
701 702 3.382546 GGTCAGCTGTTGCCATATGAAAT 59.617 43.478 14.67 0.00 40.80 2.17
702 703 4.580167 GGTCAGCTGTTGCCATATGAAATA 59.420 41.667 14.67 0.00 40.80 1.40
703 704 5.067674 GGTCAGCTGTTGCCATATGAAATAA 59.932 40.000 14.67 0.00 40.80 1.40
704 705 6.405731 GGTCAGCTGTTGCCATATGAAATAAA 60.406 38.462 14.67 0.00 40.80 1.40
705 706 7.205297 GTCAGCTGTTGCCATATGAAATAAAT 58.795 34.615 14.67 0.00 40.80 1.40
706 707 7.168637 GTCAGCTGTTGCCATATGAAATAAATG 59.831 37.037 14.67 0.00 40.80 2.32
707 708 7.068470 TCAGCTGTTGCCATATGAAATAAATGA 59.932 33.333 14.67 2.07 40.80 2.57
708 709 7.168637 CAGCTGTTGCCATATGAAATAAATGAC 59.831 37.037 5.25 0.00 40.80 3.06
709 710 6.142798 GCTGTTGCCATATGAAATAAATGACG 59.857 38.462 3.65 0.00 29.06 4.35
710 711 7.094508 TGTTGCCATATGAAATAAATGACGT 57.905 32.000 3.65 0.00 29.06 4.34
711 712 6.971756 TGTTGCCATATGAAATAAATGACGTG 59.028 34.615 3.65 0.00 29.06 4.49
712 713 6.934048 TGCCATATGAAATAAATGACGTGA 57.066 33.333 3.65 0.00 29.06 4.35
713 714 7.326968 TGCCATATGAAATAAATGACGTGAA 57.673 32.000 3.65 0.00 29.06 3.18
714 715 7.192913 TGCCATATGAAATAAATGACGTGAAC 58.807 34.615 3.65 0.00 29.06 3.18
715 716 6.636850 GCCATATGAAATAAATGACGTGAACC 59.363 38.462 3.65 0.00 29.06 3.62
716 717 7.468631 GCCATATGAAATAAATGACGTGAACCT 60.469 37.037 3.65 0.00 29.06 3.50
717 718 9.051679 CCATATGAAATAAATGACGTGAACCTA 57.948 33.333 3.65 0.00 29.06 3.08
726 727 9.886132 ATAAATGACGTGAACCTATTAAGTTCT 57.114 29.630 0.00 0.00 43.28 3.01
727 728 8.617290 AAATGACGTGAACCTATTAAGTTCTT 57.383 30.769 0.00 0.00 43.28 2.52
728 729 7.596749 ATGACGTGAACCTATTAAGTTCTTG 57.403 36.000 0.00 2.66 43.28 3.02
729 730 6.751157 TGACGTGAACCTATTAAGTTCTTGA 58.249 36.000 0.00 0.00 43.28 3.02
730 731 6.866770 TGACGTGAACCTATTAAGTTCTTGAG 59.133 38.462 0.00 0.15 43.28 3.02
731 732 6.756221 ACGTGAACCTATTAAGTTCTTGAGT 58.244 36.000 6.70 0.62 43.28 3.41
732 733 6.867293 ACGTGAACCTATTAAGTTCTTGAGTC 59.133 38.462 6.70 0.00 43.28 3.36
733 734 6.866770 CGTGAACCTATTAAGTTCTTGAGTCA 59.133 38.462 6.70 0.00 43.28 3.41
734 735 7.545965 CGTGAACCTATTAAGTTCTTGAGTCAT 59.454 37.037 0.00 0.00 43.28 3.06
735 736 8.660373 GTGAACCTATTAAGTTCTTGAGTCATG 58.340 37.037 0.00 0.00 43.28 3.07
736 737 8.593679 TGAACCTATTAAGTTCTTGAGTCATGA 58.406 33.333 4.66 4.66 43.28 3.07
737 738 9.606631 GAACCTATTAAGTTCTTGAGTCATGAT 57.393 33.333 9.35 0.00 40.39 2.45
738 739 9.965902 AACCTATTAAGTTCTTGAGTCATGATT 57.034 29.630 9.35 0.00 0.00 2.57
744 745 7.636150 AAGTTCTTGAGTCATGATTATTGGG 57.364 36.000 9.35 0.00 0.00 4.12
745 746 6.725364 AGTTCTTGAGTCATGATTATTGGGT 58.275 36.000 9.35 0.00 0.00 4.51
746 747 7.177878 AGTTCTTGAGTCATGATTATTGGGTT 58.822 34.615 9.35 0.00 0.00 4.11
747 748 8.328758 AGTTCTTGAGTCATGATTATTGGGTTA 58.671 33.333 9.35 0.00 0.00 2.85
748 749 8.956426 GTTCTTGAGTCATGATTATTGGGTTAA 58.044 33.333 9.35 0.00 0.00 2.01
749 750 8.737168 TCTTGAGTCATGATTATTGGGTTAAG 57.263 34.615 0.00 0.00 0.00 1.85
750 751 8.548025 TCTTGAGTCATGATTATTGGGTTAAGA 58.452 33.333 0.00 0.00 0.00 2.10
751 752 8.737168 TTGAGTCATGATTATTGGGTTAAGAG 57.263 34.615 0.00 0.00 0.00 2.85
752 753 7.861629 TGAGTCATGATTATTGGGTTAAGAGT 58.138 34.615 0.00 0.00 0.00 3.24
753 754 8.988060 TGAGTCATGATTATTGGGTTAAGAGTA 58.012 33.333 0.00 0.00 0.00 2.59
754 755 9.262358 GAGTCATGATTATTGGGTTAAGAGTAC 57.738 37.037 0.00 0.00 0.00 2.73
755 756 7.926555 AGTCATGATTATTGGGTTAAGAGTACG 59.073 37.037 0.00 0.00 0.00 3.67
756 757 7.709613 GTCATGATTATTGGGTTAAGAGTACGT 59.290 37.037 0.00 0.00 0.00 3.57
757 758 7.709182 TCATGATTATTGGGTTAAGAGTACGTG 59.291 37.037 0.00 0.00 0.00 4.49
758 759 6.938507 TGATTATTGGGTTAAGAGTACGTGT 58.061 36.000 0.00 0.00 0.00 4.49
759 760 7.388437 TGATTATTGGGTTAAGAGTACGTGTT 58.612 34.615 0.00 0.00 0.00 3.32
760 761 8.530311 TGATTATTGGGTTAAGAGTACGTGTTA 58.470 33.333 0.00 0.00 0.00 2.41
761 762 9.538508 GATTATTGGGTTAAGAGTACGTGTTAT 57.461 33.333 0.00 0.00 0.00 1.89
762 763 9.895138 ATTATTGGGTTAAGAGTACGTGTTATT 57.105 29.630 0.00 0.00 0.00 1.40
763 764 9.723601 TTATTGGGTTAAGAGTACGTGTTATTT 57.276 29.630 0.00 0.00 0.00 1.40
764 765 8.625786 ATTGGGTTAAGAGTACGTGTTATTTT 57.374 30.769 0.00 0.00 0.00 1.82
765 766 8.449251 TTGGGTTAAGAGTACGTGTTATTTTT 57.551 30.769 0.00 0.00 0.00 1.94
788 789 2.128128 CGTTGCAACGCACGACTC 60.128 61.111 35.89 3.35 46.06 3.36
789 790 2.585869 CGTTGCAACGCACGACTCT 61.586 57.895 35.89 0.00 46.06 3.24
790 791 1.641677 GTTGCAACGCACGACTCTT 59.358 52.632 14.90 0.00 38.71 2.85
791 792 0.383124 GTTGCAACGCACGACTCTTC 60.383 55.000 14.90 0.00 38.71 2.87
792 793 0.529773 TTGCAACGCACGACTCTTCT 60.530 50.000 0.00 0.00 38.71 2.85
793 794 0.939577 TGCAACGCACGACTCTTCTC 60.940 55.000 0.00 0.00 31.71 2.87
801 802 5.988092 ACGCACGACTCTTCTCTATATAAC 58.012 41.667 0.00 0.00 0.00 1.89
896 897 0.521291 GCAGCACGGCAAGATTTACA 59.479 50.000 0.00 0.00 0.00 2.41
897 898 1.466360 GCAGCACGGCAAGATTTACAG 60.466 52.381 0.00 0.00 0.00 2.74
898 899 1.806542 CAGCACGGCAAGATTTACAGT 59.193 47.619 0.00 0.00 0.00 3.55
899 900 3.000041 CAGCACGGCAAGATTTACAGTA 59.000 45.455 0.00 0.00 0.00 2.74
900 901 3.000727 AGCACGGCAAGATTTACAGTAC 58.999 45.455 0.00 0.00 0.00 2.73
969 979 1.203313 AGTTCCTTCCCCAGCTGTCTA 60.203 52.381 13.81 0.00 0.00 2.59
970 980 1.208293 GTTCCTTCCCCAGCTGTCTAG 59.792 57.143 13.81 4.32 0.00 2.43
973 983 1.561643 CTTCCCCAGCTGTCTAGTCA 58.438 55.000 13.81 0.00 0.00 3.41
974 984 1.480137 CTTCCCCAGCTGTCTAGTCAG 59.520 57.143 13.81 12.07 38.35 3.51
975 985 0.409876 TCCCCAGCTGTCTAGTCAGT 59.590 55.000 13.81 3.29 37.70 3.41
977 987 0.108424 CCCAGCTGTCTAGTCAGTGC 60.108 60.000 13.81 6.07 37.70 4.40
979 989 1.274728 CCAGCTGTCTAGTCAGTGCTT 59.725 52.381 13.81 0.68 37.70 3.91
980 990 2.289320 CCAGCTGTCTAGTCAGTGCTTT 60.289 50.000 13.81 0.00 37.70 3.51
981 991 2.735663 CAGCTGTCTAGTCAGTGCTTTG 59.264 50.000 16.70 6.18 37.70 2.77
982 992 2.072298 GCTGTCTAGTCAGTGCTTTGG 58.928 52.381 16.70 0.00 37.70 3.28
983 993 2.289072 GCTGTCTAGTCAGTGCTTTGGA 60.289 50.000 16.70 0.00 37.70 3.53
986 996 3.182967 GTCTAGTCAGTGCTTTGGATCG 58.817 50.000 0.00 0.00 0.00 3.69
989 999 2.693069 AGTCAGTGCTTTGGATCGAAG 58.307 47.619 0.00 3.73 0.00 3.79
990 1000 2.037772 AGTCAGTGCTTTGGATCGAAGT 59.962 45.455 8.65 0.00 0.00 3.01
1144 1168 1.494824 GTACGTGAGCTCGGTTGTTT 58.505 50.000 14.47 0.00 34.94 2.83
1173 1197 7.148641 CCTTGTCAACTCGTAATCTGCTATAT 58.851 38.462 0.00 0.00 0.00 0.86
1381 1405 4.016444 TCTGCATTTAAGGGGCACTTTAG 58.984 43.478 7.60 0.00 40.64 1.85
1613 1637 1.938577 CGCAGATGTTGATGGAAGGAG 59.061 52.381 0.00 0.00 0.00 3.69
1781 1805 5.897377 ATTGACAAATTTCCTTACCTCCG 57.103 39.130 0.00 0.00 0.00 4.63
1827 1851 1.869767 GACTTGCGGGATGATGATGAC 59.130 52.381 0.00 0.00 0.00 3.06
2183 2207 4.686972 CAATGCTCTATCTTGGAAGTCGA 58.313 43.478 0.00 0.00 0.00 4.20
2211 2235 9.553418 GAGCTTTTGTTCTAGATGAATTTCTTC 57.447 33.333 0.00 4.53 36.99 2.87
2808 2835 0.391130 CTTAAGTACCAGGCTGCGCA 60.391 55.000 10.98 10.98 0.00 6.09
2977 4420 8.921353 TCTCTGTTATTACATACTCCTAGTCC 57.079 38.462 0.00 0.00 32.86 3.85
2978 4421 8.725256 TCTCTGTTATTACATACTCCTAGTCCT 58.275 37.037 0.00 0.00 32.86 3.85
2981 4424 9.796180 CTGTTATTACATACTCCTAGTCCTAGT 57.204 37.037 0.96 0.00 32.86 2.57
3147 4590 5.733676 TCTGCAATCAAGTAAGAGCATGTA 58.266 37.500 0.00 0.00 0.00 2.29
3182 4625 8.691661 TGGTTCTAAGAAAATTGCTAGAACTT 57.308 30.769 18.77 0.00 41.58 2.66
3197 4640 3.211865 AGAACTTGGTCCGAAGAAAACC 58.788 45.455 7.74 0.00 0.00 3.27
3209 4652 5.361285 TCCGAAGAAAACCAAAATTTCTCCA 59.639 36.000 2.35 0.00 44.22 3.86
3552 4997 1.291132 GTGTAGCCTTTCGGATGCTC 58.709 55.000 1.16 0.00 36.57 4.26
3847 5292 1.839994 CTGACTCTGCTATGGGGGAAA 59.160 52.381 0.00 0.00 0.00 3.13
3859 5305 2.231380 GGGGAAAGGGGCTCAGACA 61.231 63.158 0.00 0.00 0.00 3.41
3998 5455 6.149973 CAGTACATCACACAGACATCCAAAAT 59.850 38.462 0.00 0.00 0.00 1.82
4148 5605 8.687292 ATGATTCATAAGTTCATGCACTGTAT 57.313 30.769 0.00 0.00 0.00 2.29
4682 6632 9.807386 GTACATATGACAGTTACAGACAAAAAC 57.193 33.333 10.38 0.00 0.00 2.43
4746 6697 8.487970 CGTACTTCGCTATTTTCATCATAATGT 58.512 33.333 0.00 0.00 34.32 2.71
4856 6811 8.747538 AATTAGAAACACCTTGAGTACACTTT 57.252 30.769 0.00 0.00 0.00 2.66
4929 6884 1.057822 CGCTTGTCGTGCAGAATCG 59.942 57.895 0.00 0.00 0.00 3.34
4944 6899 6.032880 GTGCAGAATCGTGAAAGATTTTAAGC 59.967 38.462 0.00 0.00 40.58 3.09
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
15 16 0.320771 AGATCACCACGACAGTTGGC 60.321 55.000 0.00 0.00 0.00 4.52
16 17 1.000843 TGAGATCACCACGACAGTTGG 59.999 52.381 0.00 0.00 0.00 3.77
17 18 2.061773 GTGAGATCACCACGACAGTTG 58.938 52.381 1.33 0.00 40.85 3.16
18 19 2.440539 GTGAGATCACCACGACAGTT 57.559 50.000 1.33 0.00 40.85 3.16
25 26 0.176680 ATCTGCCGTGAGATCACCAC 59.823 55.000 7.37 7.86 43.66 4.16
26 27 0.176449 CATCTGCCGTGAGATCACCA 59.824 55.000 7.37 0.30 43.66 4.17
27 28 1.156645 GCATCTGCCGTGAGATCACC 61.157 60.000 7.37 0.00 43.66 4.02
28 29 2.305405 GCATCTGCCGTGAGATCAC 58.695 57.895 2.78 2.78 43.15 3.06
29 30 4.842292 GCATCTGCCGTGAGATCA 57.158 55.556 0.00 0.00 29.72 2.92
39 40 3.213264 CCAACCCATGGCATCTGC 58.787 61.111 6.09 0.00 43.80 4.26
47 48 2.493278 CCTCACTTTAAGCCAACCCATG 59.507 50.000 0.00 0.00 0.00 3.66
48 49 2.557452 CCCTCACTTTAAGCCAACCCAT 60.557 50.000 0.00 0.00 0.00 4.00
49 50 1.203001 CCCTCACTTTAAGCCAACCCA 60.203 52.381 0.00 0.00 0.00 4.51
50 51 1.545841 CCCTCACTTTAAGCCAACCC 58.454 55.000 0.00 0.00 0.00 4.11
51 52 1.545841 CCCCTCACTTTAAGCCAACC 58.454 55.000 0.00 0.00 0.00 3.77
52 53 0.888619 GCCCCTCACTTTAAGCCAAC 59.111 55.000 0.00 0.00 0.00 3.77
53 54 0.777446 AGCCCCTCACTTTAAGCCAA 59.223 50.000 0.00 0.00 0.00 4.52
54 55 1.280998 GTAGCCCCTCACTTTAAGCCA 59.719 52.381 0.00 0.00 0.00 4.75
55 56 1.280998 TGTAGCCCCTCACTTTAAGCC 59.719 52.381 0.00 0.00 0.00 4.35
56 57 2.781681 TGTAGCCCCTCACTTTAAGC 57.218 50.000 0.00 0.00 0.00 3.09
57 58 4.446371 CTCATGTAGCCCCTCACTTTAAG 58.554 47.826 0.00 0.00 0.00 1.85
58 59 3.199946 CCTCATGTAGCCCCTCACTTTAA 59.800 47.826 0.00 0.00 0.00 1.52
59 60 2.771943 CCTCATGTAGCCCCTCACTTTA 59.228 50.000 0.00 0.00 0.00 1.85
60 61 1.561542 CCTCATGTAGCCCCTCACTTT 59.438 52.381 0.00 0.00 0.00 2.66
61 62 1.207791 CCTCATGTAGCCCCTCACTT 58.792 55.000 0.00 0.00 0.00 3.16
62 63 0.339859 TCCTCATGTAGCCCCTCACT 59.660 55.000 0.00 0.00 0.00 3.41
63 64 0.466124 GTCCTCATGTAGCCCCTCAC 59.534 60.000 0.00 0.00 0.00 3.51
64 65 1.043116 CGTCCTCATGTAGCCCCTCA 61.043 60.000 0.00 0.00 0.00 3.86
65 66 1.043673 ACGTCCTCATGTAGCCCCTC 61.044 60.000 0.00 0.00 0.00 4.30
66 67 0.617820 AACGTCCTCATGTAGCCCCT 60.618 55.000 0.00 0.00 0.00 4.79
67 68 0.462047 CAACGTCCTCATGTAGCCCC 60.462 60.000 0.00 0.00 0.00 5.80
68 69 0.462047 CCAACGTCCTCATGTAGCCC 60.462 60.000 0.00 0.00 0.00 5.19
69 70 0.249398 ACCAACGTCCTCATGTAGCC 59.751 55.000 0.00 0.00 0.00 3.93
70 71 1.641577 GACCAACGTCCTCATGTAGC 58.358 55.000 0.00 0.00 32.40 3.58
71 72 1.469251 CCGACCAACGTCCTCATGTAG 60.469 57.143 0.00 0.00 40.78 2.74
72 73 0.528924 CCGACCAACGTCCTCATGTA 59.471 55.000 0.00 0.00 40.78 2.29
73 74 1.292223 CCGACCAACGTCCTCATGT 59.708 57.895 0.00 0.00 40.78 3.21
74 75 0.320421 AACCGACCAACGTCCTCATG 60.320 55.000 0.00 0.00 40.78 3.07
75 76 0.037605 GAACCGACCAACGTCCTCAT 60.038 55.000 0.00 0.00 40.78 2.90
76 77 1.364901 GAACCGACCAACGTCCTCA 59.635 57.895 0.00 0.00 40.78 3.86
77 78 1.373873 GGAACCGACCAACGTCCTC 60.374 63.158 0.00 0.00 40.78 3.71
78 79 2.739132 GGAACCGACCAACGTCCT 59.261 61.111 0.00 0.00 40.78 3.85
79 80 2.735857 CGGAACCGACCAACGTCC 60.736 66.667 7.53 0.00 42.83 4.79
80 81 2.735857 CCGGAACCGACCAACGTC 60.736 66.667 15.07 0.00 42.83 4.34
81 82 3.216944 CTCCGGAACCGACCAACGT 62.217 63.158 15.07 0.00 42.83 3.99
82 83 2.431942 CTCCGGAACCGACCAACG 60.432 66.667 15.07 0.00 42.83 4.10
83 84 2.047560 CCTCCGGAACCGACCAAC 60.048 66.667 15.07 0.00 42.83 3.77
84 85 4.011517 GCCTCCGGAACCGACCAA 62.012 66.667 15.07 0.00 42.83 3.67
87 88 4.493747 CTCGCCTCCGGAACCGAC 62.494 72.222 18.81 1.15 42.83 4.79
90 91 3.703127 AACCTCGCCTCCGGAACC 61.703 66.667 5.23 0.00 34.56 3.62
91 92 2.434359 CAACCTCGCCTCCGGAAC 60.434 66.667 5.23 0.00 34.56 3.62
92 93 3.702048 CCAACCTCGCCTCCGGAA 61.702 66.667 5.23 0.00 34.56 4.30
101 102 2.176546 CAATGCGTGCCAACCTCG 59.823 61.111 0.00 0.00 0.00 4.63
102 103 2.268076 ACCAATGCGTGCCAACCTC 61.268 57.895 0.00 0.00 0.00 3.85
103 104 2.203480 ACCAATGCGTGCCAACCT 60.203 55.556 0.00 0.00 0.00 3.50
104 105 2.049248 CACCAATGCGTGCCAACC 60.049 61.111 0.00 0.00 0.00 3.77
105 106 1.661197 CACACCAATGCGTGCCAAC 60.661 57.895 2.53 0.00 37.25 3.77
106 107 2.124060 ACACACCAATGCGTGCCAA 61.124 52.632 1.66 0.00 37.25 4.52
107 108 2.518112 ACACACCAATGCGTGCCA 60.518 55.556 1.66 0.00 37.25 4.92
108 109 2.050168 CACACACCAATGCGTGCC 60.050 61.111 1.66 0.00 37.25 5.01
109 110 2.050168 CCACACACCAATGCGTGC 60.050 61.111 1.66 0.00 37.52 5.34
110 111 2.050168 GCCACACACCAATGCGTG 60.050 61.111 0.38 0.38 38.40 5.34
111 112 2.518112 TGCCACACACCAATGCGT 60.518 55.556 0.00 0.00 0.00 5.24
112 113 2.050168 GTGCCACACACCAATGCG 60.050 61.111 0.00 0.00 44.02 4.73
119 120 1.008194 TACGTCTCGTGCCACACAC 60.008 57.895 0.00 0.00 46.45 3.82
120 121 1.008194 GTACGTCTCGTGCCACACA 60.008 57.895 0.00 0.00 41.39 3.72
121 122 3.838468 GTACGTCTCGTGCCACAC 58.162 61.111 0.00 0.00 41.39 3.82
126 127 2.151049 AACCTGGGTACGTCTCGTGC 62.151 60.000 0.00 3.54 41.39 5.34
127 128 0.109412 GAACCTGGGTACGTCTCGTG 60.109 60.000 0.00 0.00 41.39 4.35
128 129 1.580845 CGAACCTGGGTACGTCTCGT 61.581 60.000 0.00 0.00 44.35 4.18
129 130 1.136147 CGAACCTGGGTACGTCTCG 59.864 63.158 0.00 0.00 0.00 4.04
130 131 1.509923 CCGAACCTGGGTACGTCTC 59.490 63.158 0.00 0.00 0.00 3.36
131 132 1.980772 CCCGAACCTGGGTACGTCT 60.981 63.158 0.00 0.00 44.76 4.18
132 133 2.575461 CCCGAACCTGGGTACGTC 59.425 66.667 0.00 0.00 44.76 4.34
154 155 2.284847 GGTGTTACCTCCCCCGGA 60.285 66.667 0.73 0.00 34.73 5.14
155 156 3.405318 GGGTGTTACCTCCCCCGG 61.405 72.222 0.00 0.00 38.28 5.73
159 160 1.493861 GACTAGGGGTGTTACCTCCC 58.506 60.000 4.54 4.54 40.56 4.30
160 161 1.008084 AGGACTAGGGGTGTTACCTCC 59.992 57.143 0.00 0.00 40.56 4.30
161 162 2.108970 CAGGACTAGGGGTGTTACCTC 58.891 57.143 0.00 0.00 39.74 3.85
162 163 1.900337 GCAGGACTAGGGGTGTTACCT 60.900 57.143 0.00 0.00 38.64 3.08
163 164 0.540454 GCAGGACTAGGGGTGTTACC 59.460 60.000 0.00 0.00 37.60 2.85
164 165 0.540454 GGCAGGACTAGGGGTGTTAC 59.460 60.000 0.00 0.00 0.00 2.50
165 166 0.974010 CGGCAGGACTAGGGGTGTTA 60.974 60.000 0.00 0.00 0.00 2.41
166 167 2.291043 CGGCAGGACTAGGGGTGTT 61.291 63.158 0.00 0.00 0.00 3.32
167 168 2.683933 CGGCAGGACTAGGGGTGT 60.684 66.667 0.00 0.00 0.00 4.16
168 169 1.338136 ATTCGGCAGGACTAGGGGTG 61.338 60.000 0.00 0.00 0.00 4.61
169 170 1.003051 ATTCGGCAGGACTAGGGGT 59.997 57.895 0.00 0.00 0.00 4.95
170 171 1.338136 ACATTCGGCAGGACTAGGGG 61.338 60.000 0.00 0.00 0.00 4.79
171 172 1.410004 TACATTCGGCAGGACTAGGG 58.590 55.000 0.00 0.00 0.00 3.53
172 173 2.431057 AGTTACATTCGGCAGGACTAGG 59.569 50.000 0.00 0.00 0.00 3.02
173 174 3.802948 AGTTACATTCGGCAGGACTAG 57.197 47.619 0.00 0.00 0.00 2.57
174 175 5.597182 AGATAAGTTACATTCGGCAGGACTA 59.403 40.000 0.00 0.00 0.00 2.59
175 176 4.406003 AGATAAGTTACATTCGGCAGGACT 59.594 41.667 0.00 0.00 0.00 3.85
176 177 4.694339 AGATAAGTTACATTCGGCAGGAC 58.306 43.478 0.00 0.00 0.00 3.85
177 178 6.474140 TTAGATAAGTTACATTCGGCAGGA 57.526 37.500 0.00 0.00 0.00 3.86
178 179 7.065324 TGTTTTAGATAAGTTACATTCGGCAGG 59.935 37.037 0.00 0.00 0.00 4.85
179 180 7.970384 TGTTTTAGATAAGTTACATTCGGCAG 58.030 34.615 0.00 0.00 0.00 4.85
180 181 7.908827 TGTTTTAGATAAGTTACATTCGGCA 57.091 32.000 0.00 0.00 0.00 5.69
181 182 9.615295 TTTTGTTTTAGATAAGTTACATTCGGC 57.385 29.630 0.00 0.00 0.00 5.54
223 224 8.806146 AGCATGTTAAAATCAGAGTTACCATTT 58.194 29.630 0.00 0.00 0.00 2.32
224 225 8.353423 AGCATGTTAAAATCAGAGTTACCATT 57.647 30.769 0.00 0.00 0.00 3.16
225 226 7.944729 AGCATGTTAAAATCAGAGTTACCAT 57.055 32.000 0.00 0.00 0.00 3.55
226 227 8.892723 CATAGCATGTTAAAATCAGAGTTACCA 58.107 33.333 0.00 0.00 0.00 3.25
227 228 8.893727 ACATAGCATGTTAAAATCAGAGTTACC 58.106 33.333 0.00 0.00 41.63 2.85
231 232 9.836864 TCATACATAGCATGTTAAAATCAGAGT 57.163 29.630 7.02 0.00 41.63 3.24
320 321 6.140422 CAGTTTGCGCCAAAAACAATATTTTG 59.860 34.615 19.96 7.34 45.50 2.44
321 322 6.037610 TCAGTTTGCGCCAAAAACAATATTTT 59.962 30.769 19.96 0.00 39.49 1.82
322 323 5.525378 TCAGTTTGCGCCAAAAACAATATTT 59.475 32.000 19.96 0.32 39.49 1.40
323 324 5.053145 TCAGTTTGCGCCAAAAACAATATT 58.947 33.333 19.96 0.93 39.49 1.28
324 325 4.626042 TCAGTTTGCGCCAAAAACAATAT 58.374 34.783 19.96 1.24 39.49 1.28
325 326 4.046938 TCAGTTTGCGCCAAAAACAATA 57.953 36.364 19.96 5.89 39.49 1.90
326 327 2.898705 TCAGTTTGCGCCAAAAACAAT 58.101 38.095 19.96 2.16 39.49 2.71
327 328 2.370281 TCAGTTTGCGCCAAAAACAA 57.630 40.000 19.96 8.19 39.49 2.83
328 329 2.370281 TTCAGTTTGCGCCAAAAACA 57.630 40.000 19.96 2.16 39.49 2.83
329 330 3.123050 AGATTCAGTTTGCGCCAAAAAC 58.877 40.909 4.18 9.48 35.03 2.43
330 331 3.451141 AGATTCAGTTTGCGCCAAAAA 57.549 38.095 4.18 0.00 35.03 1.94
331 332 4.782019 ATAGATTCAGTTTGCGCCAAAA 57.218 36.364 4.18 0.00 35.03 2.44
332 333 4.941263 ACTATAGATTCAGTTTGCGCCAAA 59.059 37.500 4.18 2.59 0.00 3.28
333 334 4.332543 CACTATAGATTCAGTTTGCGCCAA 59.667 41.667 4.18 0.00 0.00 4.52
334 335 3.871006 CACTATAGATTCAGTTTGCGCCA 59.129 43.478 4.18 0.00 0.00 5.69
335 336 3.303395 GCACTATAGATTCAGTTTGCGCC 60.303 47.826 4.18 0.00 0.00 6.53
336 337 3.309682 TGCACTATAGATTCAGTTTGCGC 59.690 43.478 6.78 0.00 0.00 6.09
337 338 4.548916 CGTGCACTATAGATTCAGTTTGCG 60.549 45.833 16.19 0.00 0.00 4.85
338 339 4.260375 CCGTGCACTATAGATTCAGTTTGC 60.260 45.833 16.19 3.80 0.00 3.68
339 340 4.870426 ACCGTGCACTATAGATTCAGTTTG 59.130 41.667 16.19 0.00 0.00 2.93
340 341 5.086104 ACCGTGCACTATAGATTCAGTTT 57.914 39.130 16.19 0.00 0.00 2.66
341 342 4.402793 AGACCGTGCACTATAGATTCAGTT 59.597 41.667 16.19 0.00 0.00 3.16
342 343 3.954904 AGACCGTGCACTATAGATTCAGT 59.045 43.478 16.19 0.00 0.00 3.41
343 344 4.576216 AGACCGTGCACTATAGATTCAG 57.424 45.455 16.19 0.00 0.00 3.02
344 345 6.004574 AGATAGACCGTGCACTATAGATTCA 58.995 40.000 16.19 0.00 30.74 2.57
345 346 6.503589 AGATAGACCGTGCACTATAGATTC 57.496 41.667 16.19 4.02 30.74 2.52
346 347 6.902771 AAGATAGACCGTGCACTATAGATT 57.097 37.500 16.19 0.00 30.74 2.40
347 348 6.348622 CGAAAGATAGACCGTGCACTATAGAT 60.349 42.308 16.19 2.67 30.74 1.98
348 349 5.049612 CGAAAGATAGACCGTGCACTATAGA 60.050 44.000 16.19 0.00 30.74 1.98
349 350 5.147865 CGAAAGATAGACCGTGCACTATAG 58.852 45.833 16.19 0.00 30.74 1.31
350 351 4.577693 ACGAAAGATAGACCGTGCACTATA 59.422 41.667 16.19 0.00 33.69 1.31
351 352 3.380637 ACGAAAGATAGACCGTGCACTAT 59.619 43.478 16.19 5.63 33.69 2.12
352 353 2.751259 ACGAAAGATAGACCGTGCACTA 59.249 45.455 16.19 0.01 33.69 2.74
353 354 1.544691 ACGAAAGATAGACCGTGCACT 59.455 47.619 16.19 0.00 33.69 4.40
354 355 1.992170 ACGAAAGATAGACCGTGCAC 58.008 50.000 6.82 6.82 33.69 4.57
355 356 3.547413 CGATACGAAAGATAGACCGTGCA 60.547 47.826 0.00 0.00 36.58 4.57
356 357 2.971915 CGATACGAAAGATAGACCGTGC 59.028 50.000 0.00 0.00 36.58 5.34
357 358 2.971915 GCGATACGAAAGATAGACCGTG 59.028 50.000 0.00 0.00 36.58 4.94
358 359 3.265070 GCGATACGAAAGATAGACCGT 57.735 47.619 0.00 0.00 38.82 4.83
361 362 6.932518 ATCGCCGCGATACGAAAGATAGAC 62.933 50.000 26.28 0.00 45.13 2.59
362 363 4.959439 ATCGCCGCGATACGAAAGATAGA 61.959 47.826 26.28 0.00 45.13 1.98
363 364 2.728225 ATCGCCGCGATACGAAAGATAG 60.728 50.000 26.28 0.00 45.13 2.08
364 365 1.198408 ATCGCCGCGATACGAAAGATA 59.802 47.619 26.28 0.00 45.13 1.98
365 366 0.039437 ATCGCCGCGATACGAAAGAT 60.039 50.000 26.28 0.00 45.13 2.40
366 367 0.659417 GATCGCCGCGATACGAAAGA 60.659 55.000 27.35 0.00 47.00 2.52
367 368 1.606350 GGATCGCCGCGATACGAAAG 61.606 60.000 27.35 0.00 47.00 2.62
368 369 1.659335 GGATCGCCGCGATACGAAA 60.659 57.895 27.35 0.00 47.00 3.46
369 370 2.050714 GGATCGCCGCGATACGAA 60.051 61.111 27.35 0.00 47.00 3.85
372 373 0.874607 AAGTTGGATCGCCGCGATAC 60.875 55.000 27.82 27.82 47.00 2.24
373 374 0.179094 AAAGTTGGATCGCCGCGATA 60.179 50.000 27.35 11.16 47.00 2.92
375 376 0.390078 TAAAAGTTGGATCGCCGCGA 60.390 50.000 19.34 19.34 41.13 5.87
376 377 0.444651 TTAAAAGTTGGATCGCCGCG 59.555 50.000 6.39 6.39 36.79 6.46
377 378 2.622546 TTTAAAAGTTGGATCGCCGC 57.377 45.000 0.00 0.00 36.79 6.53
378 379 6.033091 GTGTTTATTTAAAAGTTGGATCGCCG 59.967 38.462 0.00 0.00 36.79 6.46
379 380 6.309494 GGTGTTTATTTAAAAGTTGGATCGCC 59.691 38.462 0.00 0.00 0.00 5.54
380 381 6.309494 GGGTGTTTATTTAAAAGTTGGATCGC 59.691 38.462 0.00 0.00 0.00 4.58
381 382 7.371936 TGGGTGTTTATTTAAAAGTTGGATCG 58.628 34.615 0.00 0.00 0.00 3.69
382 383 9.719355 AATGGGTGTTTATTTAAAAGTTGGATC 57.281 29.630 0.00 0.00 0.00 3.36
394 395 9.500785 CAATCTGGTTTTAATGGGTGTTTATTT 57.499 29.630 0.00 0.00 0.00 1.40
395 396 8.875168 TCAATCTGGTTTTAATGGGTGTTTATT 58.125 29.630 0.00 0.00 0.00 1.40
396 397 8.429237 TCAATCTGGTTTTAATGGGTGTTTAT 57.571 30.769 0.00 0.00 0.00 1.40
397 398 7.524698 GCTCAATCTGGTTTTAATGGGTGTTTA 60.525 37.037 0.00 0.00 0.00 2.01
398 399 6.739331 TCAATCTGGTTTTAATGGGTGTTT 57.261 33.333 0.00 0.00 0.00 2.83
399 400 5.279456 GCTCAATCTGGTTTTAATGGGTGTT 60.279 40.000 0.00 0.00 0.00 3.32
400 401 4.220602 GCTCAATCTGGTTTTAATGGGTGT 59.779 41.667 0.00 0.00 0.00 4.16
401 402 4.675146 CGCTCAATCTGGTTTTAATGGGTG 60.675 45.833 0.00 0.00 0.00 4.61
402 403 3.443681 CGCTCAATCTGGTTTTAATGGGT 59.556 43.478 0.00 0.00 0.00 4.51
403 404 3.181487 CCGCTCAATCTGGTTTTAATGGG 60.181 47.826 0.00 0.00 0.00 4.00
404 405 3.694072 TCCGCTCAATCTGGTTTTAATGG 59.306 43.478 0.00 0.00 0.00 3.16
405 406 4.963276 TCCGCTCAATCTGGTTTTAATG 57.037 40.909 0.00 0.00 0.00 1.90
406 407 5.710099 TCTTTCCGCTCAATCTGGTTTTAAT 59.290 36.000 0.00 0.00 0.00 1.40
407 408 5.067273 TCTTTCCGCTCAATCTGGTTTTAA 58.933 37.500 0.00 0.00 0.00 1.52
408 409 4.647611 TCTTTCCGCTCAATCTGGTTTTA 58.352 39.130 0.00 0.00 0.00 1.52
409 410 3.486383 TCTTTCCGCTCAATCTGGTTTT 58.514 40.909 0.00 0.00 0.00 2.43
410 411 3.140325 TCTTTCCGCTCAATCTGGTTT 57.860 42.857 0.00 0.00 0.00 3.27
411 412 2.859165 TCTTTCCGCTCAATCTGGTT 57.141 45.000 0.00 0.00 0.00 3.67
412 413 2.859165 TTCTTTCCGCTCAATCTGGT 57.141 45.000 0.00 0.00 0.00 4.00
413 414 3.253188 TGTTTTCTTTCCGCTCAATCTGG 59.747 43.478 0.00 0.00 0.00 3.86
414 415 4.488126 TGTTTTCTTTCCGCTCAATCTG 57.512 40.909 0.00 0.00 0.00 2.90
415 416 4.761739 TGATGTTTTCTTTCCGCTCAATCT 59.238 37.500 0.00 0.00 0.00 2.40
416 417 5.046910 TGATGTTTTCTTTCCGCTCAATC 57.953 39.130 0.00 0.00 0.00 2.67
417 418 5.452078 TTGATGTTTTCTTTCCGCTCAAT 57.548 34.783 0.00 0.00 0.00 2.57
418 419 4.909696 TTGATGTTTTCTTTCCGCTCAA 57.090 36.364 0.00 0.00 0.00 3.02
419 420 6.378582 GTTATTGATGTTTTCTTTCCGCTCA 58.621 36.000 0.00 0.00 0.00 4.26
420 421 5.800438 GGTTATTGATGTTTTCTTTCCGCTC 59.200 40.000 0.00 0.00 0.00 5.03
421 422 5.242838 TGGTTATTGATGTTTTCTTTCCGCT 59.757 36.000 0.00 0.00 0.00 5.52
422 423 5.344933 GTGGTTATTGATGTTTTCTTTCCGC 59.655 40.000 0.00 0.00 0.00 5.54
423 424 6.362283 GTGTGGTTATTGATGTTTTCTTTCCG 59.638 38.462 0.00 0.00 0.00 4.30
424 425 7.206687 TGTGTGGTTATTGATGTTTTCTTTCC 58.793 34.615 0.00 0.00 0.00 3.13
425 426 8.702438 CATGTGTGGTTATTGATGTTTTCTTTC 58.298 33.333 0.00 0.00 0.00 2.62
426 427 8.420222 TCATGTGTGGTTATTGATGTTTTCTTT 58.580 29.630 0.00 0.00 0.00 2.52
427 428 7.950512 TCATGTGTGGTTATTGATGTTTTCTT 58.049 30.769 0.00 0.00 0.00 2.52
428 429 7.523293 TCATGTGTGGTTATTGATGTTTTCT 57.477 32.000 0.00 0.00 0.00 2.52
429 430 7.651304 TGTTCATGTGTGGTTATTGATGTTTTC 59.349 33.333 0.00 0.00 0.00 2.29
430 431 7.437862 GTGTTCATGTGTGGTTATTGATGTTTT 59.562 33.333 0.00 0.00 0.00 2.43
431 432 6.922957 GTGTTCATGTGTGGTTATTGATGTTT 59.077 34.615 0.00 0.00 0.00 2.83
432 433 6.446318 GTGTTCATGTGTGGTTATTGATGTT 58.554 36.000 0.00 0.00 0.00 2.71
433 434 5.048083 GGTGTTCATGTGTGGTTATTGATGT 60.048 40.000 0.00 0.00 0.00 3.06
434 435 5.183713 AGGTGTTCATGTGTGGTTATTGATG 59.816 40.000 0.00 0.00 0.00 3.07
435 436 5.324409 AGGTGTTCATGTGTGGTTATTGAT 58.676 37.500 0.00 0.00 0.00 2.57
436 437 4.724399 AGGTGTTCATGTGTGGTTATTGA 58.276 39.130 0.00 0.00 0.00 2.57
437 438 4.761739 AGAGGTGTTCATGTGTGGTTATTG 59.238 41.667 0.00 0.00 0.00 1.90
438 439 4.761739 CAGAGGTGTTCATGTGTGGTTATT 59.238 41.667 0.00 0.00 0.00 1.40
439 440 4.041567 TCAGAGGTGTTCATGTGTGGTTAT 59.958 41.667 0.00 0.00 0.00 1.89
440 441 3.389656 TCAGAGGTGTTCATGTGTGGTTA 59.610 43.478 0.00 0.00 0.00 2.85
441 442 2.172505 TCAGAGGTGTTCATGTGTGGTT 59.827 45.455 0.00 0.00 0.00 3.67
442 443 1.768275 TCAGAGGTGTTCATGTGTGGT 59.232 47.619 0.00 0.00 0.00 4.16
443 444 2.549064 TCAGAGGTGTTCATGTGTGG 57.451 50.000 0.00 0.00 0.00 4.17
444 445 4.898829 TTTTCAGAGGTGTTCATGTGTG 57.101 40.909 0.00 0.00 0.00 3.82
445 446 6.299141 AGTATTTTCAGAGGTGTTCATGTGT 58.701 36.000 0.00 0.00 0.00 3.72
446 447 6.808008 AGTATTTTCAGAGGTGTTCATGTG 57.192 37.500 0.00 0.00 0.00 3.21
447 448 7.066284 GCATAGTATTTTCAGAGGTGTTCATGT 59.934 37.037 0.00 0.00 0.00 3.21
448 449 7.412853 GCATAGTATTTTCAGAGGTGTTCATG 58.587 38.462 0.00 0.00 0.00 3.07
449 450 6.258727 CGCATAGTATTTTCAGAGGTGTTCAT 59.741 38.462 0.00 0.00 0.00 2.57
450 451 5.580691 CGCATAGTATTTTCAGAGGTGTTCA 59.419 40.000 0.00 0.00 0.00 3.18
451 452 5.810587 TCGCATAGTATTTTCAGAGGTGTTC 59.189 40.000 0.00 0.00 0.00 3.18
452 453 5.730550 TCGCATAGTATTTTCAGAGGTGTT 58.269 37.500 0.00 0.00 0.00 3.32
453 454 5.339008 TCGCATAGTATTTTCAGAGGTGT 57.661 39.130 0.00 0.00 0.00 4.16
454 455 4.747108 CCTCGCATAGTATTTTCAGAGGTG 59.253 45.833 0.39 0.00 39.19 4.00
455 456 4.202264 CCCTCGCATAGTATTTTCAGAGGT 60.202 45.833 7.30 0.00 41.62 3.85
456 457 4.039245 TCCCTCGCATAGTATTTTCAGAGG 59.961 45.833 1.49 1.49 42.53 3.69
457 458 5.201713 TCCCTCGCATAGTATTTTCAGAG 57.798 43.478 0.00 0.00 0.00 3.35
458 459 5.607939 TTCCCTCGCATAGTATTTTCAGA 57.392 39.130 0.00 0.00 0.00 3.27
459 460 5.584649 TGTTTCCCTCGCATAGTATTTTCAG 59.415 40.000 0.00 0.00 0.00 3.02
460 461 5.492895 TGTTTCCCTCGCATAGTATTTTCA 58.507 37.500 0.00 0.00 0.00 2.69
461 462 6.128117 TGTTGTTTCCCTCGCATAGTATTTTC 60.128 38.462 0.00 0.00 0.00 2.29
462 463 5.708230 TGTTGTTTCCCTCGCATAGTATTTT 59.292 36.000 0.00 0.00 0.00 1.82
463 464 5.250200 TGTTGTTTCCCTCGCATAGTATTT 58.750 37.500 0.00 0.00 0.00 1.40
464 465 4.839121 TGTTGTTTCCCTCGCATAGTATT 58.161 39.130 0.00 0.00 0.00 1.89
465 466 4.481368 TGTTGTTTCCCTCGCATAGTAT 57.519 40.909 0.00 0.00 0.00 2.12
466 467 3.965379 TGTTGTTTCCCTCGCATAGTA 57.035 42.857 0.00 0.00 0.00 1.82
467 468 2.851263 TGTTGTTTCCCTCGCATAGT 57.149 45.000 0.00 0.00 0.00 2.12
468 469 6.377327 AAATATGTTGTTTCCCTCGCATAG 57.623 37.500 0.00 0.00 0.00 2.23
469 470 7.717436 TGATAAATATGTTGTTTCCCTCGCATA 59.283 33.333 0.00 0.00 0.00 3.14
470 471 6.545666 TGATAAATATGTTGTTTCCCTCGCAT 59.454 34.615 0.00 0.00 0.00 4.73
471 472 5.883115 TGATAAATATGTTGTTTCCCTCGCA 59.117 36.000 0.00 0.00 0.00 5.10
472 473 6.371809 TGATAAATATGTTGTTTCCCTCGC 57.628 37.500 0.00 0.00 0.00 5.03
473 474 8.383318 AGATGATAAATATGTTGTTTCCCTCG 57.617 34.615 0.00 0.00 0.00 4.63
488 489 9.527157 TCTCTCTCTCCGAATAAGATGATAAAT 57.473 33.333 0.00 0.00 0.00 1.40
489 490 8.926092 TCTCTCTCTCCGAATAAGATGATAAA 57.074 34.615 0.00 0.00 0.00 1.40
490 491 7.609918 CCTCTCTCTCTCCGAATAAGATGATAA 59.390 40.741 0.00 0.00 0.00 1.75
491 492 7.037945 TCCTCTCTCTCTCCGAATAAGATGATA 60.038 40.741 0.00 0.00 0.00 2.15
492 493 5.945784 CCTCTCTCTCTCCGAATAAGATGAT 59.054 44.000 0.00 0.00 0.00 2.45
493 494 5.072464 TCCTCTCTCTCTCCGAATAAGATGA 59.928 44.000 0.00 0.00 0.00 2.92
494 495 5.181245 GTCCTCTCTCTCTCCGAATAAGATG 59.819 48.000 0.00 0.00 0.00 2.90
495 496 5.163141 TGTCCTCTCTCTCTCCGAATAAGAT 60.163 44.000 0.00 0.00 0.00 2.40
496 497 4.164413 TGTCCTCTCTCTCTCCGAATAAGA 59.836 45.833 0.00 0.00 0.00 2.10
497 498 4.456535 TGTCCTCTCTCTCTCCGAATAAG 58.543 47.826 0.00 0.00 0.00 1.73
498 499 4.505324 TGTCCTCTCTCTCTCCGAATAA 57.495 45.455 0.00 0.00 0.00 1.40
499 500 4.505324 TTGTCCTCTCTCTCTCCGAATA 57.495 45.455 0.00 0.00 0.00 1.75
500 501 3.374042 TTGTCCTCTCTCTCTCCGAAT 57.626 47.619 0.00 0.00 0.00 3.34
501 502 2.881111 TTGTCCTCTCTCTCTCCGAA 57.119 50.000 0.00 0.00 0.00 4.30
502 503 2.239907 TCATTGTCCTCTCTCTCTCCGA 59.760 50.000 0.00 0.00 0.00 4.55
503 504 2.357637 GTCATTGTCCTCTCTCTCTCCG 59.642 54.545 0.00 0.00 0.00 4.63
504 505 3.631250 AGTCATTGTCCTCTCTCTCTCC 58.369 50.000 0.00 0.00 0.00 3.71
505 506 5.299279 CCTAAGTCATTGTCCTCTCTCTCTC 59.701 48.000 0.00 0.00 0.00 3.20
506 507 5.044476 TCCTAAGTCATTGTCCTCTCTCTCT 60.044 44.000 0.00 0.00 0.00 3.10
507 508 5.067283 GTCCTAAGTCATTGTCCTCTCTCTC 59.933 48.000 0.00 0.00 0.00 3.20
508 509 4.953579 GTCCTAAGTCATTGTCCTCTCTCT 59.046 45.833 0.00 0.00 0.00 3.10
509 510 4.953579 AGTCCTAAGTCATTGTCCTCTCTC 59.046 45.833 0.00 0.00 0.00 3.20
510 511 4.709397 CAGTCCTAAGTCATTGTCCTCTCT 59.291 45.833 0.00 0.00 0.00 3.10
511 512 4.707448 TCAGTCCTAAGTCATTGTCCTCTC 59.293 45.833 0.00 0.00 0.00 3.20
512 513 4.464597 GTCAGTCCTAAGTCATTGTCCTCT 59.535 45.833 0.00 0.00 0.00 3.69
513 514 4.382147 GGTCAGTCCTAAGTCATTGTCCTC 60.382 50.000 0.00 0.00 0.00 3.71
514 515 3.515901 GGTCAGTCCTAAGTCATTGTCCT 59.484 47.826 0.00 0.00 0.00 3.85
515 516 3.260884 TGGTCAGTCCTAAGTCATTGTCC 59.739 47.826 0.00 0.00 37.07 4.02
516 517 4.537135 TGGTCAGTCCTAAGTCATTGTC 57.463 45.455 0.00 0.00 37.07 3.18
517 518 4.974645 TTGGTCAGTCCTAAGTCATTGT 57.025 40.909 0.00 0.00 37.07 2.71
518 519 5.525378 GCTATTGGTCAGTCCTAAGTCATTG 59.475 44.000 0.00 0.00 37.07 2.82
519 520 5.396884 GGCTATTGGTCAGTCCTAAGTCATT 60.397 44.000 0.00 0.00 37.07 2.57
520 521 4.101741 GGCTATTGGTCAGTCCTAAGTCAT 59.898 45.833 0.00 0.00 37.07 3.06
521 522 3.451178 GGCTATTGGTCAGTCCTAAGTCA 59.549 47.826 0.00 0.00 37.07 3.41
522 523 3.451178 TGGCTATTGGTCAGTCCTAAGTC 59.549 47.826 0.00 0.00 37.07 3.01
523 524 3.450904 TGGCTATTGGTCAGTCCTAAGT 58.549 45.455 0.00 0.00 37.07 2.24
524 525 4.696479 ATGGCTATTGGTCAGTCCTAAG 57.304 45.455 0.00 0.00 37.07 2.18
525 526 5.070446 CAGTATGGCTATTGGTCAGTCCTAA 59.930 44.000 0.00 0.00 37.07 2.69
526 527 4.588951 CAGTATGGCTATTGGTCAGTCCTA 59.411 45.833 0.00 0.00 37.07 2.94
527 528 3.389329 CAGTATGGCTATTGGTCAGTCCT 59.611 47.826 0.00 0.00 37.07 3.85
528 529 3.388024 TCAGTATGGCTATTGGTCAGTCC 59.612 47.826 0.00 0.00 36.16 3.85
529 530 4.672587 TCAGTATGGCTATTGGTCAGTC 57.327 45.455 0.00 0.00 36.16 3.51
530 531 4.684485 GCTTCAGTATGGCTATTGGTCAGT 60.684 45.833 0.00 0.00 36.16 3.41
531 532 3.812053 GCTTCAGTATGGCTATTGGTCAG 59.188 47.826 0.00 0.00 36.16 3.51
532 533 3.433598 GGCTTCAGTATGGCTATTGGTCA 60.434 47.826 0.00 0.00 36.16 4.02
533 534 3.142174 GGCTTCAGTATGGCTATTGGTC 58.858 50.000 0.00 0.00 36.16 4.02
534 535 2.509548 TGGCTTCAGTATGGCTATTGGT 59.490 45.455 0.00 0.00 36.16 3.67
535 536 2.880890 GTGGCTTCAGTATGGCTATTGG 59.119 50.000 0.00 0.00 36.16 3.16
536 537 2.545526 CGTGGCTTCAGTATGGCTATTG 59.454 50.000 0.00 0.00 36.16 1.90
537 538 2.170607 ACGTGGCTTCAGTATGGCTATT 59.829 45.455 0.00 0.00 36.16 1.73
538 539 1.762957 ACGTGGCTTCAGTATGGCTAT 59.237 47.619 0.00 0.00 36.16 2.97
539 540 1.136305 GACGTGGCTTCAGTATGGCTA 59.864 52.381 0.00 0.00 36.16 3.93
540 541 0.108138 GACGTGGCTTCAGTATGGCT 60.108 55.000 0.00 0.00 36.16 4.75
541 542 1.090052 GGACGTGGCTTCAGTATGGC 61.090 60.000 0.00 0.00 36.16 4.40
542 543 0.462047 GGGACGTGGCTTCAGTATGG 60.462 60.000 0.00 0.00 36.16 2.74
543 544 3.065575 GGGACGTGGCTTCAGTATG 57.934 57.895 0.00 0.00 37.54 2.39
557 558 0.240945 CAATGTTGTTGGCTCGGGAC 59.759 55.000 0.00 0.00 0.00 4.46
558 559 0.893270 CCAATGTTGTTGGCTCGGGA 60.893 55.000 0.00 0.00 32.18 5.14
559 560 1.178534 ACCAATGTTGTTGGCTCGGG 61.179 55.000 6.72 0.00 43.23 5.14
560 561 1.199097 GTACCAATGTTGTTGGCTCGG 59.801 52.381 6.72 0.00 43.23 4.63
561 562 1.876799 TGTACCAATGTTGTTGGCTCG 59.123 47.619 6.72 0.00 43.23 5.03
562 563 2.884639 ACTGTACCAATGTTGTTGGCTC 59.115 45.455 6.72 1.76 43.23 4.70
563 564 2.622942 CACTGTACCAATGTTGTTGGCT 59.377 45.455 6.72 0.00 43.23 4.75
564 565 2.862140 GCACTGTACCAATGTTGTTGGC 60.862 50.000 6.72 0.00 43.23 4.52
565 566 2.288152 GGCACTGTACCAATGTTGTTGG 60.288 50.000 5.32 5.32 44.91 3.77
566 567 2.360483 TGGCACTGTACCAATGTTGTTG 59.640 45.455 0.00 0.00 33.12 3.33
567 568 2.660572 TGGCACTGTACCAATGTTGTT 58.339 42.857 0.00 0.00 33.12 2.83
568 569 2.356665 TGGCACTGTACCAATGTTGT 57.643 45.000 0.00 0.00 33.12 3.32
569 570 3.724508 TTTGGCACTGTACCAATGTTG 57.275 42.857 13.05 0.00 46.25 3.33
570 571 5.048083 CACTATTTGGCACTGTACCAATGTT 60.048 40.000 13.05 4.86 46.25 2.71
571 572 4.458989 CACTATTTGGCACTGTACCAATGT 59.541 41.667 13.05 9.71 46.25 2.71
572 573 4.699735 TCACTATTTGGCACTGTACCAATG 59.300 41.667 13.05 8.68 46.25 2.82
573 574 4.917385 TCACTATTTGGCACTGTACCAAT 58.083 39.130 13.05 6.63 46.25 3.16
574 575 4.359434 TCACTATTTGGCACTGTACCAA 57.641 40.909 8.41 8.41 45.37 3.67
575 576 4.225042 AGATCACTATTTGGCACTGTACCA 59.775 41.667 0.00 0.00 34.65 3.25
576 577 4.770795 AGATCACTATTTGGCACTGTACC 58.229 43.478 0.00 0.00 0.00 3.34
577 578 5.643777 ACAAGATCACTATTTGGCACTGTAC 59.356 40.000 0.00 0.00 0.00 2.90
578 579 5.804639 ACAAGATCACTATTTGGCACTGTA 58.195 37.500 0.00 0.00 0.00 2.74
579 580 4.655963 ACAAGATCACTATTTGGCACTGT 58.344 39.130 0.00 0.00 0.00 3.55
580 581 5.220739 GCTACAAGATCACTATTTGGCACTG 60.221 44.000 0.00 0.00 0.00 3.66
581 582 4.878397 GCTACAAGATCACTATTTGGCACT 59.122 41.667 0.00 0.00 0.00 4.40
582 583 4.878397 AGCTACAAGATCACTATTTGGCAC 59.122 41.667 0.00 0.00 0.00 5.01
583 584 5.102953 AGCTACAAGATCACTATTTGGCA 57.897 39.130 0.00 0.00 0.00 4.92
584 585 6.049149 TGTAGCTACAAGATCACTATTTGGC 58.951 40.000 24.15 0.00 32.40 4.52
585 586 6.201806 GCTGTAGCTACAAGATCACTATTTGG 59.798 42.308 25.95 11.06 35.50 3.28
586 587 6.201806 GGCTGTAGCTACAAGATCACTATTTG 59.798 42.308 25.95 11.46 41.70 2.32
587 588 6.127054 TGGCTGTAGCTACAAGATCACTATTT 60.127 38.462 25.95 0.00 41.70 1.40
588 589 5.363868 TGGCTGTAGCTACAAGATCACTATT 59.636 40.000 25.95 0.00 41.70 1.73
589 590 4.895889 TGGCTGTAGCTACAAGATCACTAT 59.104 41.667 25.95 0.00 41.70 2.12
590 591 4.278310 TGGCTGTAGCTACAAGATCACTA 58.722 43.478 25.95 8.02 41.70 2.74
591 592 3.099905 TGGCTGTAGCTACAAGATCACT 58.900 45.455 25.95 0.00 41.70 3.41
592 593 3.526931 TGGCTGTAGCTACAAGATCAC 57.473 47.619 25.95 13.22 41.70 3.06
593 594 3.676049 CGTTGGCTGTAGCTACAAGATCA 60.676 47.826 25.95 17.68 41.70 2.92
594 595 2.860735 CGTTGGCTGTAGCTACAAGATC 59.139 50.000 25.95 15.63 41.70 2.75
595 596 2.496070 TCGTTGGCTGTAGCTACAAGAT 59.504 45.455 25.95 0.00 41.70 2.40
596 597 1.890489 TCGTTGGCTGTAGCTACAAGA 59.110 47.619 25.95 15.19 41.70 3.02
597 598 2.363788 TCGTTGGCTGTAGCTACAAG 57.636 50.000 25.95 19.77 41.70 3.16
598 599 2.036733 ACTTCGTTGGCTGTAGCTACAA 59.963 45.455 25.95 10.21 41.70 2.41
599 600 1.616865 ACTTCGTTGGCTGTAGCTACA 59.383 47.619 24.63 24.63 41.70 2.74
600 601 2.365408 ACTTCGTTGGCTGTAGCTAC 57.635 50.000 17.30 17.30 41.70 3.58
601 602 3.697542 TGATACTTCGTTGGCTGTAGCTA 59.302 43.478 3.63 0.00 41.70 3.32
602 603 2.496070 TGATACTTCGTTGGCTGTAGCT 59.504 45.455 3.63 0.00 41.70 3.32
603 604 2.860735 CTGATACTTCGTTGGCTGTAGC 59.139 50.000 0.00 0.00 41.14 3.58
604 605 2.860735 GCTGATACTTCGTTGGCTGTAG 59.139 50.000 0.00 0.00 0.00 2.74
605 606 2.418197 GGCTGATACTTCGTTGGCTGTA 60.418 50.000 0.00 0.00 0.00 2.74
606 607 1.676014 GGCTGATACTTCGTTGGCTGT 60.676 52.381 0.00 0.00 0.00 4.40
607 608 1.009829 GGCTGATACTTCGTTGGCTG 58.990 55.000 0.00 0.00 0.00 4.85
608 609 0.460284 CGGCTGATACTTCGTTGGCT 60.460 55.000 0.00 0.00 0.00 4.75
609 610 1.429148 CCGGCTGATACTTCGTTGGC 61.429 60.000 0.00 0.00 0.00 4.52
610 611 1.429148 GCCGGCTGATACTTCGTTGG 61.429 60.000 22.15 0.00 0.00 3.77
611 612 1.429148 GGCCGGCTGATACTTCGTTG 61.429 60.000 28.56 0.00 0.00 4.10
612 613 1.153429 GGCCGGCTGATACTTCGTT 60.153 57.895 28.56 0.00 0.00 3.85
613 614 2.355986 TGGCCGGCTGATACTTCGT 61.356 57.895 28.56 0.00 0.00 3.85
614 615 1.883084 GTGGCCGGCTGATACTTCG 60.883 63.158 28.56 0.00 0.00 3.79
615 616 1.883084 CGTGGCCGGCTGATACTTC 60.883 63.158 28.56 7.32 0.00 3.01
616 617 2.186903 CGTGGCCGGCTGATACTT 59.813 61.111 28.56 0.00 0.00 2.24
617 618 3.075005 ACGTGGCCGGCTGATACT 61.075 61.111 28.56 7.85 38.78 2.12
618 619 2.585247 GACGTGGCCGGCTGATAC 60.585 66.667 28.56 18.42 39.71 2.24
619 620 3.845259 GGACGTGGCCGGCTGATA 61.845 66.667 28.56 7.82 43.49 2.15
640 641 4.564110 GACTACCGGGGCCATGGC 62.564 72.222 29.47 29.47 41.06 4.40
641 642 2.768344 AGACTACCGGGGCCATGG 60.768 66.667 7.63 7.63 0.00 3.66
642 643 1.622607 TTCAGACTACCGGGGCCATG 61.623 60.000 6.32 0.00 0.00 3.66
643 644 1.306654 TTCAGACTACCGGGGCCAT 60.307 57.895 6.32 0.00 0.00 4.40
644 645 1.987855 CTTCAGACTACCGGGGCCA 60.988 63.158 6.32 0.00 0.00 5.36
645 646 2.732619 CCTTCAGACTACCGGGGCC 61.733 68.421 6.32 0.00 0.00 5.80
646 647 1.551019 AACCTTCAGACTACCGGGGC 61.551 60.000 6.32 0.00 0.00 5.80
647 648 0.249398 CAACCTTCAGACTACCGGGG 59.751 60.000 6.32 0.00 0.00 5.73
648 649 0.974383 ACAACCTTCAGACTACCGGG 59.026 55.000 6.32 0.00 0.00 5.73
649 650 1.343465 ACACAACCTTCAGACTACCGG 59.657 52.381 0.00 0.00 0.00 5.28
650 651 2.035449 TCACACAACCTTCAGACTACCG 59.965 50.000 0.00 0.00 0.00 4.02
651 652 3.654414 CTCACACAACCTTCAGACTACC 58.346 50.000 0.00 0.00 0.00 3.18
652 653 3.060602 GCTCACACAACCTTCAGACTAC 58.939 50.000 0.00 0.00 0.00 2.73
653 654 2.698274 TGCTCACACAACCTTCAGACTA 59.302 45.455 0.00 0.00 0.00 2.59
654 655 1.486310 TGCTCACACAACCTTCAGACT 59.514 47.619 0.00 0.00 0.00 3.24
655 656 1.599542 GTGCTCACACAACCTTCAGAC 59.400 52.381 0.00 0.00 46.61 3.51
656 657 1.953559 GTGCTCACACAACCTTCAGA 58.046 50.000 0.00 0.00 46.61 3.27
666 667 1.373497 CTGACCTCGGTGCTCACAC 60.373 63.158 2.21 0.00 46.66 3.82
667 668 3.051210 CTGACCTCGGTGCTCACA 58.949 61.111 2.21 0.00 0.00 3.58
668 669 2.433318 GCTGACCTCGGTGCTCAC 60.433 66.667 0.00 0.00 0.00 3.51
669 670 2.601666 AGCTGACCTCGGTGCTCA 60.602 61.111 0.00 0.00 0.00 4.26
670 671 2.125753 CAGCTGACCTCGGTGCTC 60.126 66.667 8.42 0.00 33.03 4.26
671 672 2.511452 AACAGCTGACCTCGGTGCT 61.511 57.895 23.35 0.00 36.04 4.40
672 673 2.031163 AACAGCTGACCTCGGTGC 59.969 61.111 23.35 0.00 33.41 5.01
673 674 2.320587 GCAACAGCTGACCTCGGTG 61.321 63.158 23.35 0.00 36.06 4.94
674 675 2.031163 GCAACAGCTGACCTCGGT 59.969 61.111 23.35 0.00 0.00 4.69
675 676 2.743928 GGCAACAGCTGACCTCGG 60.744 66.667 23.35 3.79 0.00 4.63
676 677 2.031012 TGGCAACAGCTGACCTCG 59.969 61.111 23.35 4.50 46.17 4.63
687 688 7.192913 TCACGTCATTTATTTCATATGGCAAC 58.807 34.615 2.13 0.00 0.00 4.17
688 689 7.326968 TCACGTCATTTATTTCATATGGCAA 57.673 32.000 2.13 0.00 0.00 4.52
689 690 6.934048 TCACGTCATTTATTTCATATGGCA 57.066 33.333 2.13 0.00 0.00 4.92
690 691 6.636850 GGTTCACGTCATTTATTTCATATGGC 59.363 38.462 2.13 0.00 0.00 4.40
691 692 7.930217 AGGTTCACGTCATTTATTTCATATGG 58.070 34.615 2.13 0.00 0.00 2.74
700 701 9.886132 AGAACTTAATAGGTTCACGTCATTTAT 57.114 29.630 15.94 0.00 43.67 1.40
701 702 9.715121 AAGAACTTAATAGGTTCACGTCATTTA 57.285 29.630 15.94 0.00 43.67 1.40
702 703 8.504005 CAAGAACTTAATAGGTTCACGTCATTT 58.496 33.333 15.94 0.00 43.67 2.32
703 704 7.876068 TCAAGAACTTAATAGGTTCACGTCATT 59.124 33.333 15.94 0.03 43.67 2.57
704 705 7.383687 TCAAGAACTTAATAGGTTCACGTCAT 58.616 34.615 15.94 0.00 43.67 3.06
705 706 6.751157 TCAAGAACTTAATAGGTTCACGTCA 58.249 36.000 15.94 0.00 43.67 4.35
706 707 6.867293 ACTCAAGAACTTAATAGGTTCACGTC 59.133 38.462 15.94 0.00 43.67 4.34
707 708 6.756221 ACTCAAGAACTTAATAGGTTCACGT 58.244 36.000 15.94 5.78 43.67 4.49
708 709 6.866770 TGACTCAAGAACTTAATAGGTTCACG 59.133 38.462 15.94 7.56 43.67 4.35
709 710 8.660373 CATGACTCAAGAACTTAATAGGTTCAC 58.340 37.037 15.94 3.20 43.67 3.18
710 711 8.593679 TCATGACTCAAGAACTTAATAGGTTCA 58.406 33.333 15.94 0.00 43.67 3.18
711 712 9.606631 ATCATGACTCAAGAACTTAATAGGTTC 57.393 33.333 7.12 7.12 42.15 3.62
712 713 9.965902 AATCATGACTCAAGAACTTAATAGGTT 57.034 29.630 0.00 0.00 0.00 3.50
718 719 9.177608 CCCAATAATCATGACTCAAGAACTTAA 57.822 33.333 0.00 0.00 0.00 1.85
719 720 8.328758 ACCCAATAATCATGACTCAAGAACTTA 58.671 33.333 0.00 0.00 0.00 2.24
720 721 7.177878 ACCCAATAATCATGACTCAAGAACTT 58.822 34.615 0.00 0.00 0.00 2.66
721 722 6.725364 ACCCAATAATCATGACTCAAGAACT 58.275 36.000 0.00 0.00 0.00 3.01
722 723 7.396540 AACCCAATAATCATGACTCAAGAAC 57.603 36.000 0.00 0.00 0.00 3.01
723 724 9.177608 CTTAACCCAATAATCATGACTCAAGAA 57.822 33.333 0.00 0.00 0.00 2.52
724 725 8.548025 TCTTAACCCAATAATCATGACTCAAGA 58.452 33.333 0.00 0.00 0.00 3.02
725 726 8.737168 TCTTAACCCAATAATCATGACTCAAG 57.263 34.615 0.00 0.00 0.00 3.02
726 727 8.328758 ACTCTTAACCCAATAATCATGACTCAA 58.671 33.333 0.00 0.00 0.00 3.02
727 728 7.861629 ACTCTTAACCCAATAATCATGACTCA 58.138 34.615 0.00 0.00 0.00 3.41
728 729 9.262358 GTACTCTTAACCCAATAATCATGACTC 57.738 37.037 0.00 0.00 0.00 3.36
729 730 7.926555 CGTACTCTTAACCCAATAATCATGACT 59.073 37.037 0.00 0.00 0.00 3.41
730 731 7.709613 ACGTACTCTTAACCCAATAATCATGAC 59.290 37.037 0.00 0.00 0.00 3.06
731 732 7.709182 CACGTACTCTTAACCCAATAATCATGA 59.291 37.037 0.00 0.00 0.00 3.07
732 733 7.494625 ACACGTACTCTTAACCCAATAATCATG 59.505 37.037 0.00 0.00 0.00 3.07
733 734 7.562135 ACACGTACTCTTAACCCAATAATCAT 58.438 34.615 0.00 0.00 0.00 2.45
734 735 6.938507 ACACGTACTCTTAACCCAATAATCA 58.061 36.000 0.00 0.00 0.00 2.57
735 736 7.838771 AACACGTACTCTTAACCCAATAATC 57.161 36.000 0.00 0.00 0.00 1.75
736 737 9.895138 AATAACACGTACTCTTAACCCAATAAT 57.105 29.630 0.00 0.00 0.00 1.28
737 738 9.723601 AAATAACACGTACTCTTAACCCAATAA 57.276 29.630 0.00 0.00 0.00 1.40
738 739 9.723601 AAAATAACACGTACTCTTAACCCAATA 57.276 29.630 0.00 0.00 0.00 1.90
739 740 8.625786 AAAATAACACGTACTCTTAACCCAAT 57.374 30.769 0.00 0.00 0.00 3.16
740 741 8.449251 AAAAATAACACGTACTCTTAACCCAA 57.551 30.769 0.00 0.00 0.00 4.12
772 773 0.383124 GAAGAGTCGTGCGTTGCAAC 60.383 55.000 19.89 19.89 41.47 4.17
773 774 0.529773 AGAAGAGTCGTGCGTTGCAA 60.530 50.000 0.00 0.00 41.47 4.08
774 775 0.939577 GAGAAGAGTCGTGCGTTGCA 60.940 55.000 0.00 0.00 35.60 4.08
775 776 0.664767 AGAGAAGAGTCGTGCGTTGC 60.665 55.000 0.00 0.00 0.00 4.17
776 777 2.613730 TAGAGAAGAGTCGTGCGTTG 57.386 50.000 0.00 0.00 0.00 4.10
777 778 6.428799 GTTATATAGAGAAGAGTCGTGCGTT 58.571 40.000 0.00 0.00 0.00 4.84
778 779 5.333187 CGTTATATAGAGAAGAGTCGTGCGT 60.333 44.000 0.00 0.00 0.00 5.24
779 780 5.074134 CGTTATATAGAGAAGAGTCGTGCG 58.926 45.833 0.00 0.00 0.00 5.34
780 781 6.073657 ACTCGTTATATAGAGAAGAGTCGTGC 60.074 42.308 10.74 0.00 37.87 5.34
781 782 7.169476 TCACTCGTTATATAGAGAAGAGTCGTG 59.831 40.741 10.74 3.41 35.59 4.35
782 783 7.208777 TCACTCGTTATATAGAGAAGAGTCGT 58.791 38.462 10.74 0.00 35.59 4.34
783 784 7.640616 TCACTCGTTATATAGAGAAGAGTCG 57.359 40.000 10.74 1.46 35.59 4.18
789 790 9.594478 TGCAAATTTCACTCGTTATATAGAGAA 57.406 29.630 10.74 0.80 37.87 2.87
790 791 9.764363 ATGCAAATTTCACTCGTTATATAGAGA 57.236 29.630 10.74 0.00 37.87 3.10
801 802 9.340695 TCACTTATAAAATGCAAATTTCACTCG 57.659 29.630 4.32 0.00 0.00 4.18
837 838 2.879646 CCACCGTTGCTTTTACCTAACA 59.120 45.455 0.00 0.00 0.00 2.41
896 897 5.047943 AGCACTGACTCGACAAAATAGTACT 60.048 40.000 0.00 0.00 0.00 2.73
897 898 5.162075 AGCACTGACTCGACAAAATAGTAC 58.838 41.667 0.00 0.00 0.00 2.73
898 899 5.386958 AGCACTGACTCGACAAAATAGTA 57.613 39.130 0.00 0.00 0.00 1.82
899 900 4.258702 AGCACTGACTCGACAAAATAGT 57.741 40.909 0.00 0.00 0.00 2.12
900 901 5.377358 CAAAGCACTGACTCGACAAAATAG 58.623 41.667 0.00 0.00 0.00 1.73
969 979 2.037772 ACTTCGATCCAAAGCACTGACT 59.962 45.455 3.07 0.00 0.00 3.41
970 980 2.413453 GACTTCGATCCAAAGCACTGAC 59.587 50.000 3.07 0.00 0.00 3.51
973 983 1.339151 GGGACTTCGATCCAAAGCACT 60.339 52.381 7.35 0.00 40.96 4.40
974 984 1.087501 GGGACTTCGATCCAAAGCAC 58.912 55.000 7.35 0.00 40.96 4.40
975 985 0.035439 GGGGACTTCGATCCAAAGCA 60.035 55.000 7.35 0.00 40.96 3.91
977 987 1.134371 GGAGGGGACTTCGATCCAAAG 60.134 57.143 7.35 1.84 44.43 2.77
979 989 0.981277 GGGAGGGGACTTCGATCCAA 60.981 60.000 7.35 0.00 44.43 3.53
980 990 1.382695 GGGAGGGGACTTCGATCCA 60.383 63.158 7.35 0.00 44.43 3.41
981 991 2.141448 GGGGAGGGGACTTCGATCC 61.141 68.421 0.00 0.00 44.43 3.36
982 992 2.499827 CGGGGAGGGGACTTCGATC 61.500 68.421 0.00 0.00 44.43 3.69
983 993 2.444140 CGGGGAGGGGACTTCGAT 60.444 66.667 0.00 0.00 44.43 3.59
986 996 3.009714 AAGCGGGGAGGGGACTTC 61.010 66.667 0.00 0.00 44.43 3.01
989 999 3.009714 AAGAAGCGGGGAGGGGAC 61.010 66.667 0.00 0.00 0.00 4.46
990 1000 2.687566 GAAGAAGCGGGGAGGGGA 60.688 66.667 0.00 0.00 0.00 4.81
1144 1168 3.581332 AGATTACGAGTTGACAAGGGGAA 59.419 43.478 0.00 0.00 0.00 3.97
1173 1197 1.153449 CGCATACCTTCCGCTGGAA 60.153 57.895 9.22 9.22 39.66 3.53
1381 1405 5.752892 AAGGAAAAAGAAAGAGACGAACC 57.247 39.130 0.00 0.00 0.00 3.62
1613 1637 5.593909 TGGGATATGTCAACATGTTCATTCC 59.406 40.000 15.58 18.07 37.15 3.01
1813 1837 2.916702 TTCCTGTCATCATCATCCCG 57.083 50.000 0.00 0.00 0.00 5.14
1827 1851 6.183360 ACCAGTGTAATTGTTCCTTTTTCCTG 60.183 38.462 0.00 0.00 0.00 3.86
1916 1940 9.618890 ATGTCAAGCATTACAAAGTGTATAGAT 57.381 29.630 0.00 0.00 33.14 1.98
1946 1970 7.876936 AACTAGAAGACGATATAACAGTCCA 57.123 36.000 0.00 0.00 35.65 4.02
2097 2121 9.740239 AAAGATATGTCATGGATTTGAAAATCG 57.260 29.630 9.13 0.00 44.43 3.34
2149 2173 6.686630 AGATAGAGCATTGCTACATCAGTAC 58.313 40.000 23.59 7.21 39.88 2.73
2183 2207 9.240734 AGAAATTCATCTAGAACAAAAGCTCAT 57.759 29.630 0.00 0.00 39.49 2.90
2211 2235 5.053145 GGAAGACAGTACATCAATAGCCAG 58.947 45.833 0.00 0.00 0.00 4.85
2808 2835 7.765695 ATCAATTGAGTAAACAACACCAGAT 57.234 32.000 14.54 0.00 32.50 2.90
2976 4419 8.824781 CAGATGTAATGATCAGACAAAACTAGG 58.175 37.037 15.12 4.28 0.00 3.02
2977 4420 9.376075 ACAGATGTAATGATCAGACAAAACTAG 57.624 33.333 15.12 11.66 0.00 2.57
2978 4421 9.725019 AACAGATGTAATGATCAGACAAAACTA 57.275 29.630 15.12 0.00 0.00 2.24
2979 4422 8.627208 AACAGATGTAATGATCAGACAAAACT 57.373 30.769 15.12 12.12 0.00 2.66
2980 4423 8.725148 AGAACAGATGTAATGATCAGACAAAAC 58.275 33.333 15.12 10.57 0.00 2.43
2981 4424 8.724229 CAGAACAGATGTAATGATCAGACAAAA 58.276 33.333 15.12 0.00 0.00 2.44
3182 4625 5.128008 AGAAATTTTGGTTTTCTTCGGACCA 59.872 36.000 0.00 0.00 39.74 4.02
3209 4652 5.121105 AGGTGCTACGAAAAAGTTAACACT 58.879 37.500 8.61 0.00 33.11 3.55
3847 5292 1.614824 CCCTTCTGTCTGAGCCCCT 60.615 63.158 0.00 0.00 0.00 4.79
3859 5305 6.213600 ACTGACACATCATAAGTAACCCTTCT 59.786 38.462 0.00 0.00 33.22 2.85
3998 5455 3.249799 CAGACATGTACAACGCCTCAAAA 59.750 43.478 0.00 0.00 0.00 2.44
4084 5541 5.852282 AGTGGCATAATGGGTAATTTGTC 57.148 39.130 0.00 0.00 0.00 3.18
4148 5605 4.943093 GGGTCGCCTGGTAATAAACTAAAA 59.057 41.667 0.00 0.00 0.00 1.52
4215 6117 1.079543 CTCTCAAGTGGAGGCGTGG 60.080 63.158 0.00 0.00 44.19 4.94
4666 6616 6.498304 AGAGCATTGTTTTTGTCTGTAACTG 58.502 36.000 0.00 0.00 0.00 3.16
4746 6697 9.249457 CTCTTTAGTGATGCTCGACAAATATTA 57.751 33.333 0.00 0.00 0.00 0.98
4756 6707 2.854777 CGTTCCTCTTTAGTGATGCTCG 59.145 50.000 0.00 0.00 0.00 5.03
4884 6839 7.659799 ACAAGCAACATGATAAGTAGTGTTACA 59.340 33.333 0.00 0.00 33.79 2.41
4886 6841 7.062956 CGACAAGCAACATGATAAGTAGTGTTA 59.937 37.037 0.00 0.00 33.79 2.41
4944 6899 0.298707 CCGACGACATGAGCAAATCG 59.701 55.000 0.00 0.00 40.39 3.34
4996 6951 1.383456 AATATGCCCGTGCGTTGCAT 61.383 50.000 17.97 17.97 46.68 3.96


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.