Multiple sequence alignment - TraesCS4D01G176400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G176400 chr4D 100.000 4570 0 0 1 4570 306794400 306798969 0.000000e+00 8440.0
1 TraesCS4D01G176400 chr4A 92.625 3349 128 43 428 3724 170711541 170708260 0.000000e+00 4706.0
2 TraesCS4D01G176400 chr4A 90.488 410 27 4 1 403 170725762 170725358 8.710000e-147 531.0
3 TraesCS4D01G176400 chr4A 88.449 303 11 3 3730 4008 170708217 170707915 1.220000e-90 344.0
4 TraesCS4D01G176400 chr4A 91.111 45 2 2 385 427 170724225 170724181 4.940000e-05 60.2
5 TraesCS4D01G176400 chr4B 91.626 2245 92 25 1 2176 382690991 382693208 0.000000e+00 3016.0
6 TraesCS4D01G176400 chr4B 92.693 739 38 8 2994 3724 382693929 382694659 0.000000e+00 1051.0
7 TraesCS4D01G176400 chr4B 86.352 381 35 11 2230 2602 382693215 382693586 2.560000e-107 399.0
8 TraesCS4D01G176400 chr4B 91.824 159 7 1 3794 3946 382711010 382711168 2.770000e-52 217.0
9 TraesCS4D01G176400 chr4B 96.000 50 2 0 3933 3982 382711429 382711478 1.050000e-11 82.4
10 TraesCS4D01G176400 chr4B 76.000 150 31 5 134 280 653005498 653005351 6.340000e-09 73.1
11 TraesCS4D01G176400 chr2D 93.860 228 13 1 1083 1310 52227325 52227551 4.380000e-90 342.0
12 TraesCS4D01G176400 chr2D 82.550 149 20 5 2777 2920 646068580 646068433 4.800000e-25 126.0
13 TraesCS4D01G176400 chr2D 83.784 111 15 2 4422 4530 82141239 82141348 8.090000e-18 102.0
14 TraesCS4D01G176400 chr2B 93.421 228 14 1 1083 1310 81755667 81755893 2.040000e-88 337.0
15 TraesCS4D01G176400 chr2B 82.581 155 21 5 2771 2920 789288696 789288849 1.030000e-26 132.0
16 TraesCS4D01G176400 chr2B 82.353 153 21 5 2771 2918 571952273 571952424 1.330000e-25 128.0
17 TraesCS4D01G176400 chr2B 82.051 156 20 7 2771 2920 789415301 789415454 4.800000e-25 126.0
18 TraesCS4D01G176400 chr2B 83.333 138 15 7 2771 2902 571885344 571885479 2.230000e-23 121.0
19 TraesCS4D01G176400 chr2B 75.581 258 45 16 2668 2920 551400916 551400672 1.340000e-20 111.0
20 TraesCS4D01G176400 chr2A 93.421 228 14 1 1083 1310 53782735 53782961 2.040000e-88 337.0
21 TraesCS4D01G176400 chr2A 96.522 115 4 0 4039 4153 39598577 39598691 1.680000e-44 191.0
22 TraesCS4D01G176400 chr2A 94.958 119 6 0 4039 4157 53792899 53792781 2.170000e-43 187.0
23 TraesCS4D01G176400 chr1B 97.414 116 3 0 4039 4154 15215872 15215987 1.000000e-46 198.0
24 TraesCS4D01G176400 chr7D 96.522 115 4 0 4039 4153 18849801 18849687 1.680000e-44 191.0
25 TraesCS4D01G176400 chr7D 89.691 97 3 7 4435 4525 54239552 54239647 2.890000e-22 117.0
26 TraesCS4D01G176400 chr7B 95.041 121 5 1 4037 4157 743548683 743548802 6.040000e-44 189.0
27 TraesCS4D01G176400 chr6B 95.000 120 6 0 4035 4154 101459427 101459308 6.040000e-44 189.0
28 TraesCS4D01G176400 chr6B 80.769 130 16 7 2777 2902 43513120 43512996 4.870000e-15 93.5
29 TraesCS4D01G176400 chr5D 95.690 116 5 0 4039 4154 509422706 509422591 2.170000e-43 187.0
30 TraesCS4D01G176400 chr5D 77.510 249 35 15 2677 2921 360416991 360417222 3.710000e-26 130.0
31 TraesCS4D01G176400 chr5B 94.309 123 6 1 4034 4156 8996979 8996858 2.170000e-43 187.0
32 TraesCS4D01G176400 chr5B 90.977 133 10 2 4036 4167 15642537 15642406 1.310000e-40 178.0
33 TraesCS4D01G176400 chr5B 88.000 75 9 0 4452 4526 508093566 508093640 6.300000e-14 89.8
34 TraesCS4D01G176400 chr1A 88.618 123 9 4 4301 4419 483198516 483198395 1.330000e-30 145.0
35 TraesCS4D01G176400 chr1A 76.604 265 40 14 2668 2919 314485895 314485640 4.800000e-25 126.0
36 TraesCS4D01G176400 chrUn 82.906 117 18 2 2787 2902 94588849 94588734 2.250000e-18 104.0
37 TraesCS4D01G176400 chrUn 83.871 93 14 1 4433 4525 29525891 29525800 2.260000e-13 87.9
38 TraesCS4D01G176400 chr3A 78.261 161 33 2 1101 1260 465225766 465225925 8.090000e-18 102.0
39 TraesCS4D01G176400 chr5A 90.667 75 5 2 4453 4526 528263907 528263834 1.050000e-16 99.0
40 TraesCS4D01G176400 chr5A 82.558 86 12 3 4445 4529 539084215 539084132 6.340000e-09 73.1
41 TraesCS4D01G176400 chr5A 82.432 74 9 3 180 250 673733060 673733132 1.370000e-05 62.1
42 TraesCS4D01G176400 chr6D 88.095 84 7 2 4446 4526 465049257 465049340 3.760000e-16 97.1
43 TraesCS4D01G176400 chr3D 76.744 172 40 0 1101 1272 339476213 339476042 3.760000e-16 97.1
44 TraesCS4D01G176400 chr3B 76.744 172 40 0 1101 1272 438381866 438381695 3.760000e-16 97.1
45 TraesCS4D01G176400 chr3B 81.481 108 10 9 4428 4530 451404750 451404852 3.790000e-11 80.5
46 TraesCS4D01G176400 chr1D 85.106 94 10 4 4438 4531 22424532 22424621 4.870000e-15 93.5
47 TraesCS4D01G176400 chr1D 73.913 253 53 9 2676 2924 6173213 6172970 6.300000e-14 89.8
48 TraesCS4D01G176400 chr1D 76.829 164 30 8 1101 1260 470220201 470220360 8.150000e-13 86.1
49 TraesCS4D01G176400 chr1D 94.595 37 1 1 4327 4362 412659973 412659937 6.390000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G176400 chr4D 306794400 306798969 4569 False 8440.000000 8440 100.000000 1 4570 1 chr4D.!!$F1 4569
1 TraesCS4D01G176400 chr4A 170707915 170711541 3626 True 2525.000000 4706 90.537000 428 4008 2 chr4A.!!$R1 3580
2 TraesCS4D01G176400 chr4A 170724181 170725762 1581 True 295.600000 531 90.799500 1 427 2 chr4A.!!$R2 426
3 TraesCS4D01G176400 chr4B 382690991 382694659 3668 False 1488.666667 3016 90.223667 1 3724 3 chr4B.!!$F1 3723

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
871 2076 2.167693 TCCTCGTCACTCTCTCTCTCTC 59.832 54.545 0.0 0.0 0.00 3.20 F
1380 2610 0.833287 CCACCATCGGTCTTCCATCT 59.167 55.000 0.0 0.0 31.02 2.90 F
2435 3700 1.077663 ACCTTGGGATTTCCTGCATGT 59.922 47.619 0.0 0.0 36.20 3.21 F
2723 3995 0.338814 AGATCGGTACACCTTCCCCT 59.661 55.000 0.0 0.0 0.00 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2714 3986 0.400594 CCAAAGTCGAAGGGGAAGGT 59.599 55.0 0.00 0.0 0.00 3.50 R
2715 3987 0.400594 ACCAAAGTCGAAGGGGAAGG 59.599 55.0 0.00 0.0 0.00 3.46 R
3543 4872 0.033503 TGCCTCGAGACCTACATGGA 60.034 55.0 15.71 0.0 39.71 3.41 R
4142 5535 0.036388 TCCAAGTGCGGGTTGAGATC 60.036 55.0 0.00 0.0 0.00 2.75 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
59 60 7.948034 ATAAGAAAAACACGGGATTGGAATA 57.052 32.000 0.00 0.00 0.00 1.75
96 97 4.525912 TCCTACGGGAGTTAAGTTTGTC 57.474 45.455 0.00 0.00 43.33 3.18
151 161 4.437239 AGTCGTGGATGCTAGATTTTCTG 58.563 43.478 0.00 0.00 0.00 3.02
158 168 6.767902 GTGGATGCTAGATTTTCTGTGGAATA 59.232 38.462 0.00 0.00 0.00 1.75
377 388 3.976793 AAATGCAGTGTTGTCTGACTG 57.023 42.857 9.51 0.00 42.18 3.51
426 1589 7.765307 ACCACAATTATCACTTCTATGCAAAG 58.235 34.615 0.00 0.00 0.00 2.77
454 1617 7.653767 AAGTAAGAAAAGAACGTGTCATAGG 57.346 36.000 0.00 0.00 0.00 2.57
605 1769 6.128499 GCACGTTACCAACACTAATATGTCAA 60.128 38.462 0.00 0.00 30.55 3.18
868 2073 3.343617 CTTTCCTCGTCACTCTCTCTCT 58.656 50.000 0.00 0.00 0.00 3.10
869 2074 2.684001 TCCTCGTCACTCTCTCTCTC 57.316 55.000 0.00 0.00 0.00 3.20
870 2075 2.184533 TCCTCGTCACTCTCTCTCTCT 58.815 52.381 0.00 0.00 0.00 3.10
871 2076 2.167693 TCCTCGTCACTCTCTCTCTCTC 59.832 54.545 0.00 0.00 0.00 3.20
872 2077 2.168521 CCTCGTCACTCTCTCTCTCTCT 59.831 54.545 0.00 0.00 0.00 3.10
873 2078 3.448686 CTCGTCACTCTCTCTCTCTCTC 58.551 54.545 0.00 0.00 0.00 3.20
874 2079 3.096852 TCGTCACTCTCTCTCTCTCTCT 58.903 50.000 0.00 0.00 0.00 3.10
875 2080 3.130516 TCGTCACTCTCTCTCTCTCTCTC 59.869 52.174 0.00 0.00 0.00 3.20
1380 2610 0.833287 CCACCATCGGTCTTCCATCT 59.167 55.000 0.00 0.00 31.02 2.90
1387 2617 1.903877 CGGTCTTCCATCTGGCACCT 61.904 60.000 9.05 0.00 34.44 4.00
1413 2643 3.530260 CACCCCATGGCAATCGGC 61.530 66.667 6.09 0.00 43.74 5.54
1829 3065 3.505680 GCATGTAACAAATCCACTCACCA 59.494 43.478 0.00 0.00 0.00 4.17
1909 3152 6.944096 TGGATATGCATGAAACATCCAAAAA 58.056 32.000 20.89 3.22 41.61 1.94
2112 3369 8.669243 TCTATCTGTGCATAAGATCATAGTACG 58.331 37.037 15.81 0.00 35.92 3.67
2120 3377 8.021396 TGCATAAGATCATAGTACGTGATACAC 58.979 37.037 14.26 5.51 36.49 2.90
2149 3406 1.686587 CTCTCCACCATGGCATACGTA 59.313 52.381 13.04 0.00 37.47 3.57
2190 3447 8.353423 AGAGGCTTCATTGTGTTTATGTTATT 57.647 30.769 0.00 0.00 0.00 1.40
2191 3448 9.461312 AGAGGCTTCATTGTGTTTATGTTATTA 57.539 29.630 0.00 0.00 0.00 0.98
2225 3482 5.772825 TGGTGCTTTCCATAATGAATAGC 57.227 39.130 0.00 0.00 33.18 2.97
2228 3485 5.207768 GTGCTTTCCATAATGAATAGCGTG 58.792 41.667 0.00 0.00 34.23 5.34
2348 3609 7.257003 TGGAATCAACACATGTTTATATGCAC 58.743 34.615 0.00 0.00 35.83 4.57
2351 3612 8.464770 AATCAACACATGTTTATATGCACAAC 57.535 30.769 0.00 0.00 35.83 3.32
2435 3700 1.077663 ACCTTGGGATTTCCTGCATGT 59.922 47.619 0.00 0.00 36.20 3.21
2538 3809 5.917541 AAACAAGGAATGGTATATACGCG 57.082 39.130 3.53 3.53 0.00 6.01
2639 3911 8.915036 ACTACTTGATATATCCTTTCACGTTCT 58.085 33.333 10.25 0.00 0.00 3.01
2669 3941 6.494666 AAAGATATATCCTTTCACGGTGGA 57.505 37.500 9.18 0.00 0.00 4.02
2685 3957 4.703093 ACGGTGGAGTTTTTACCCAATATG 59.297 41.667 0.00 0.00 0.00 1.78
2710 3982 5.139435 TGGCAACATAATCTCTAGATCGG 57.861 43.478 0.00 0.00 46.17 4.18
2711 3983 4.588951 TGGCAACATAATCTCTAGATCGGT 59.411 41.667 0.00 0.00 46.17 4.69
2713 3985 6.094061 GGCAACATAATCTCTAGATCGGTAC 58.906 44.000 0.00 0.00 32.75 3.34
2714 3986 6.294564 GGCAACATAATCTCTAGATCGGTACA 60.295 42.308 0.00 0.00 32.75 2.90
2715 3987 6.583050 GCAACATAATCTCTAGATCGGTACAC 59.417 42.308 0.00 0.00 32.75 2.90
2716 3988 6.821031 ACATAATCTCTAGATCGGTACACC 57.179 41.667 0.00 0.00 32.75 4.16
2718 3990 7.005296 ACATAATCTCTAGATCGGTACACCTT 58.995 38.462 0.00 0.00 32.75 3.50
2719 3991 7.175293 ACATAATCTCTAGATCGGTACACCTTC 59.825 40.741 0.00 0.00 32.75 3.46
2720 3992 3.818180 TCTCTAGATCGGTACACCTTCC 58.182 50.000 0.00 0.00 0.00 3.46
2721 3993 2.885894 CTCTAGATCGGTACACCTTCCC 59.114 54.545 0.00 0.00 0.00 3.97
2722 3994 1.962100 CTAGATCGGTACACCTTCCCC 59.038 57.143 0.00 0.00 0.00 4.81
2723 3995 0.338814 AGATCGGTACACCTTCCCCT 59.661 55.000 0.00 0.00 0.00 4.79
2724 3996 1.201424 GATCGGTACACCTTCCCCTT 58.799 55.000 0.00 0.00 0.00 3.95
2734 4006 0.400594 CCTTCCCCTTCGACTTTGGT 59.599 55.000 0.00 0.00 0.00 3.67
2741 4013 2.470821 CCTTCGACTTTGGTATAGGCG 58.529 52.381 0.00 0.00 45.43 5.52
2823 4095 5.348418 CAGACTGTTTAAGTGTGGATGTG 57.652 43.478 0.00 0.00 44.53 3.21
2848 4120 2.494059 TCTTAAATATGCAGAGGCCGC 58.506 47.619 0.00 0.00 40.13 6.53
2849 4121 2.104792 TCTTAAATATGCAGAGGCCGCT 59.895 45.455 1.77 1.77 40.13 5.52
2953 4226 6.647067 CCTTTCATGTTTTTCTCTACTCTCGT 59.353 38.462 0.00 0.00 0.00 4.18
3199 4527 6.427150 GTCAAACGAGCTGTTGAATTCTTAA 58.573 36.000 7.05 0.00 40.84 1.85
3208 4536 6.939163 AGCTGTTGAATTCTTAATCTGAGTGT 59.061 34.615 7.05 0.00 0.00 3.55
3564 4893 1.202463 CCATGTAGGTCTCGAGGCAAG 60.202 57.143 20.37 5.02 0.00 4.01
3680 5012 8.777865 TTCAATCATTATAACGGGATGATCTC 57.222 34.615 0.00 0.00 39.04 2.75
3690 5022 1.880675 GGGATGATCTCTTGCATGCAG 59.119 52.381 21.50 14.85 34.94 4.41
3696 5028 4.461198 TGATCTCTTGCATGCAGATCATT 58.539 39.130 31.67 15.65 39.97 2.57
3703 5035 5.773176 TCTTGCATGCAGATCATTTATCCAT 59.227 36.000 21.50 0.00 34.90 3.41
3706 5038 4.393990 GCATGCAGATCATTTATCCATCGA 59.606 41.667 14.21 0.00 34.90 3.59
3727 5096 4.356289 GAGAAGCAAGCTAGCTACAGTAC 58.644 47.826 19.70 8.49 45.89 2.73
3728 5097 3.131400 AGAAGCAAGCTAGCTACAGTACC 59.869 47.826 19.70 4.63 45.89 3.34
3863 5233 0.249573 GTGGACGGTTCGGTTTCTGA 60.250 55.000 0.00 0.00 0.00 3.27
3903 5273 4.470334 TGGATTGTCTTCACATCGATCA 57.530 40.909 0.00 0.00 30.55 2.92
3931 5304 4.206404 CGTTAGTACACAAGGATATGCGTG 59.794 45.833 8.54 8.54 35.48 5.34
4010 5403 8.237949 AGTATCGTACTATCAGTGATGTAATGC 58.762 37.037 16.15 10.14 37.23 3.56
4011 5404 6.635030 TCGTACTATCAGTGATGTAATGCT 57.365 37.500 16.15 0.00 0.00 3.79
4012 5405 6.669278 TCGTACTATCAGTGATGTAATGCTC 58.331 40.000 16.15 3.90 0.00 4.26
4013 5406 6.486993 TCGTACTATCAGTGATGTAATGCTCT 59.513 38.462 16.15 0.00 0.00 4.09
4014 5407 7.660208 TCGTACTATCAGTGATGTAATGCTCTA 59.340 37.037 16.15 0.00 0.00 2.43
4015 5408 8.454894 CGTACTATCAGTGATGTAATGCTCTAT 58.545 37.037 16.15 0.00 0.00 1.98
4016 5409 9.566530 GTACTATCAGTGATGTAATGCTCTATG 57.433 37.037 16.15 0.00 0.00 2.23
4017 5410 8.187913 ACTATCAGTGATGTAATGCTCTATGT 57.812 34.615 16.15 0.00 0.00 2.29
4018 5411 8.087136 ACTATCAGTGATGTAATGCTCTATGTG 58.913 37.037 16.15 0.00 0.00 3.21
4019 5412 6.225981 TCAGTGATGTAATGCTCTATGTGT 57.774 37.500 0.00 0.00 0.00 3.72
4020 5413 6.276091 TCAGTGATGTAATGCTCTATGTGTC 58.724 40.000 0.00 0.00 0.00 3.67
4021 5414 6.044682 CAGTGATGTAATGCTCTATGTGTCA 58.955 40.000 0.00 0.00 0.00 3.58
4022 5415 6.200475 CAGTGATGTAATGCTCTATGTGTCAG 59.800 42.308 0.00 0.00 0.00 3.51
4023 5416 5.050499 GTGATGTAATGCTCTATGTGTCAGC 60.050 44.000 0.00 0.00 0.00 4.26
4024 5417 3.797039 TGTAATGCTCTATGTGTCAGCC 58.203 45.455 0.00 0.00 31.68 4.85
4025 5418 3.197549 TGTAATGCTCTATGTGTCAGCCA 59.802 43.478 0.00 0.00 31.68 4.75
4026 5419 3.572632 AATGCTCTATGTGTCAGCCAT 57.427 42.857 0.00 0.00 31.68 4.40
4027 5420 4.694760 AATGCTCTATGTGTCAGCCATA 57.305 40.909 0.00 0.00 31.68 2.74
4028 5421 3.459232 TGCTCTATGTGTCAGCCATAC 57.541 47.619 0.00 0.00 31.68 2.39
4029 5422 2.765699 TGCTCTATGTGTCAGCCATACA 59.234 45.455 0.00 0.00 31.68 2.29
4030 5423 3.126831 GCTCTATGTGTCAGCCATACAC 58.873 50.000 6.83 6.83 45.96 2.90
4036 5429 1.806542 GTGTCAGCCATACACACTTGG 59.193 52.381 8.49 0.00 45.26 3.61
4037 5430 1.696884 TGTCAGCCATACACACTTGGA 59.303 47.619 0.00 0.00 34.81 3.53
4038 5431 2.289631 TGTCAGCCATACACACTTGGAG 60.290 50.000 0.00 0.00 34.81 3.86
4039 5432 1.278985 TCAGCCATACACACTTGGAGG 59.721 52.381 0.00 0.00 34.81 4.30
4040 5433 0.620556 AGCCATACACACTTGGAGGG 59.379 55.000 0.00 0.00 40.92 4.30
4041 5434 0.328258 GCCATACACACTTGGAGGGT 59.672 55.000 0.00 0.00 40.01 4.34
4042 5435 1.271926 GCCATACACACTTGGAGGGTT 60.272 52.381 0.00 0.00 40.01 4.11
4043 5436 2.026636 GCCATACACACTTGGAGGGTTA 60.027 50.000 0.00 0.00 40.01 2.85
4044 5437 3.873910 CCATACACACTTGGAGGGTTAG 58.126 50.000 0.00 0.00 32.22 2.34
4045 5438 3.370527 CCATACACACTTGGAGGGTTAGG 60.371 52.174 0.00 0.00 32.22 2.69
4046 5439 2.112279 ACACACTTGGAGGGTTAGGA 57.888 50.000 0.00 0.00 21.60 2.94
4047 5440 2.632537 ACACACTTGGAGGGTTAGGAT 58.367 47.619 0.00 0.00 21.60 3.24
4048 5441 2.572104 ACACACTTGGAGGGTTAGGATC 59.428 50.000 0.00 0.00 21.60 3.36
4049 5442 2.092914 CACACTTGGAGGGTTAGGATCC 60.093 54.545 2.48 2.48 21.60 3.36
4050 5443 2.225908 ACACTTGGAGGGTTAGGATCCT 60.226 50.000 20.48 20.48 34.04 3.24
4051 5444 2.436173 CACTTGGAGGGTTAGGATCCTC 59.564 54.545 20.22 4.44 46.57 3.71
4052 5445 2.319438 ACTTGGAGGGTTAGGATCCTCT 59.681 50.000 20.22 9.24 46.51 3.69
4053 5446 2.478872 TGGAGGGTTAGGATCCTCTG 57.521 55.000 20.22 0.00 46.51 3.35
4054 5447 1.052617 GGAGGGTTAGGATCCTCTGC 58.947 60.000 20.22 10.85 46.51 4.26
4055 5448 1.692762 GGAGGGTTAGGATCCTCTGCA 60.693 57.143 20.22 0.00 46.51 4.41
4056 5449 1.691434 GAGGGTTAGGATCCTCTGCAG 59.309 57.143 20.22 7.63 44.54 4.41
4057 5450 1.008938 AGGGTTAGGATCCTCTGCAGT 59.991 52.381 20.22 0.00 0.00 4.40
4058 5451 2.247635 AGGGTTAGGATCCTCTGCAGTA 59.752 50.000 20.22 0.00 0.00 2.74
4059 5452 2.365941 GGGTTAGGATCCTCTGCAGTAC 59.634 54.545 20.22 6.17 0.00 2.73
4060 5453 3.301274 GGTTAGGATCCTCTGCAGTACT 58.699 50.000 20.22 2.48 0.00 2.73
4061 5454 3.068873 GGTTAGGATCCTCTGCAGTACTG 59.931 52.174 20.22 18.93 0.00 2.74
4062 5455 2.541233 AGGATCCTCTGCAGTACTGT 57.459 50.000 23.44 2.01 0.00 3.55
4063 5456 3.671740 AGGATCCTCTGCAGTACTGTA 57.328 47.619 23.44 18.51 0.00 2.74
4064 5457 3.292460 AGGATCCTCTGCAGTACTGTAC 58.708 50.000 23.44 9.93 0.00 2.90
4065 5458 3.024547 GGATCCTCTGCAGTACTGTACA 58.975 50.000 23.44 13.04 0.00 2.90
4066 5459 3.067461 GGATCCTCTGCAGTACTGTACAG 59.933 52.174 23.44 21.44 0.00 2.74
4067 5460 3.156288 TCCTCTGCAGTACTGTACAGT 57.844 47.619 30.13 30.13 45.02 3.55
4068 5461 2.820197 TCCTCTGCAGTACTGTACAGTG 59.180 50.000 33.77 20.54 42.52 3.66
4069 5462 2.558795 CCTCTGCAGTACTGTACAGTGT 59.441 50.000 33.77 20.26 42.52 3.55
4070 5463 3.005897 CCTCTGCAGTACTGTACAGTGTT 59.994 47.826 33.77 20.50 42.52 3.32
4071 5464 3.977427 TCTGCAGTACTGTACAGTGTTG 58.023 45.455 33.77 28.94 42.52 3.33
4072 5465 3.383505 TCTGCAGTACTGTACAGTGTTGT 59.616 43.478 33.77 15.28 42.52 3.32
4073 5466 4.581409 TCTGCAGTACTGTACAGTGTTGTA 59.419 41.667 33.77 26.75 42.52 2.41
4084 5477 2.240493 AGTGTTGTACAGTCACTGCC 57.760 50.000 24.71 0.00 40.29 4.85
4085 5478 1.484653 AGTGTTGTACAGTCACTGCCA 59.515 47.619 24.71 0.00 40.29 4.92
4086 5479 2.104792 AGTGTTGTACAGTCACTGCCAT 59.895 45.455 24.71 9.28 40.29 4.40
4087 5480 2.224079 GTGTTGTACAGTCACTGCCATG 59.776 50.000 19.22 0.00 34.37 3.66
4088 5481 2.158827 TGTTGTACAGTCACTGCCATGT 60.159 45.455 4.13 0.00 34.37 3.21
4089 5482 2.168326 TGTACAGTCACTGCCATGTG 57.832 50.000 4.13 0.00 39.15 3.21
4090 5483 1.270785 TGTACAGTCACTGCCATGTGG 60.271 52.381 4.13 0.00 38.40 4.17
4091 5484 0.324614 TACAGTCACTGCCATGTGGG 59.675 55.000 4.13 0.00 38.40 4.61
4092 5485 1.376086 CAGTCACTGCCATGTGGGA 59.624 57.895 0.00 0.00 40.01 4.37
4093 5486 0.957395 CAGTCACTGCCATGTGGGAC 60.957 60.000 0.00 5.25 40.01 4.46
4094 5487 1.675641 GTCACTGCCATGTGGGACC 60.676 63.158 0.54 0.00 40.01 4.46
4095 5488 1.847506 TCACTGCCATGTGGGACCT 60.848 57.895 0.54 0.00 40.01 3.85
4096 5489 1.676635 CACTGCCATGTGGGACCTG 60.677 63.158 0.54 0.00 40.01 4.00
4097 5490 2.044650 CTGCCATGTGGGACCTGG 60.045 66.667 0.54 0.00 40.01 4.45
4106 5499 4.447342 GGGACCTGGCCCCACATG 62.447 72.222 13.98 0.00 42.62 3.21
4107 5500 3.661648 GGACCTGGCCCCACATGT 61.662 66.667 0.00 0.00 0.00 3.21
4108 5501 2.044946 GACCTGGCCCCACATGTC 60.045 66.667 0.00 0.00 0.00 3.06
4109 5502 2.858476 ACCTGGCCCCACATGTCA 60.858 61.111 0.00 0.00 0.00 3.58
4110 5503 2.215451 GACCTGGCCCCACATGTCAT 62.215 60.000 0.00 0.00 36.44 3.06
4111 5504 1.454479 CCTGGCCCCACATGTCATC 60.454 63.158 0.00 0.00 0.00 2.92
4112 5505 1.454479 CTGGCCCCACATGTCATCC 60.454 63.158 0.00 0.00 0.00 3.51
4113 5506 2.214122 CTGGCCCCACATGTCATCCA 62.214 60.000 0.00 0.30 0.00 3.41
4114 5507 1.754234 GGCCCCACATGTCATCCAC 60.754 63.158 0.00 0.00 0.00 4.02
4115 5508 1.001020 GCCCCACATGTCATCCACA 60.001 57.895 0.00 0.00 40.18 4.17
4116 5509 1.315257 GCCCCACATGTCATCCACAC 61.315 60.000 0.00 0.00 38.04 3.82
4117 5510 0.329261 CCCCACATGTCATCCACACT 59.671 55.000 0.00 0.00 38.04 3.55
4118 5511 1.559219 CCCCACATGTCATCCACACTA 59.441 52.381 0.00 0.00 38.04 2.74
4119 5512 2.632377 CCCACATGTCATCCACACTAC 58.368 52.381 0.00 0.00 38.04 2.73
4120 5513 2.027285 CCCACATGTCATCCACACTACA 60.027 50.000 0.00 0.00 38.04 2.74
4121 5514 3.264947 CCACATGTCATCCACACTACAG 58.735 50.000 0.00 0.00 38.04 2.74
4122 5515 2.674852 CACATGTCATCCACACTACAGC 59.325 50.000 0.00 0.00 38.04 4.40
4123 5516 2.302733 ACATGTCATCCACACTACAGCA 59.697 45.455 0.00 0.00 38.04 4.41
4124 5517 2.455674 TGTCATCCACACTACAGCAC 57.544 50.000 0.00 0.00 0.00 4.40
4125 5518 1.001974 TGTCATCCACACTACAGCACC 59.998 52.381 0.00 0.00 0.00 5.01
4126 5519 1.001974 GTCATCCACACTACAGCACCA 59.998 52.381 0.00 0.00 0.00 4.17
4127 5520 1.908619 TCATCCACACTACAGCACCAT 59.091 47.619 0.00 0.00 0.00 3.55
4128 5521 3.103742 TCATCCACACTACAGCACCATA 58.896 45.455 0.00 0.00 0.00 2.74
4129 5522 3.118775 TCATCCACACTACAGCACCATAC 60.119 47.826 0.00 0.00 0.00 2.39
4130 5523 1.203758 TCCACACTACAGCACCATACG 59.796 52.381 0.00 0.00 0.00 3.06
4131 5524 1.640428 CACACTACAGCACCATACGG 58.360 55.000 0.00 0.00 38.77 4.02
4133 5526 2.164827 CACACTACAGCACCATACGGTA 59.835 50.000 0.00 0.00 46.94 4.02
4134 5527 2.165030 ACACTACAGCACCATACGGTAC 59.835 50.000 0.00 0.00 46.94 3.34
4135 5528 2.426024 CACTACAGCACCATACGGTACT 59.574 50.000 0.00 0.00 46.94 2.73
4138 5531 2.282827 AGCACCATACGGTACTGCA 58.717 52.632 0.23 0.00 46.94 4.41
4139 5532 0.175760 AGCACCATACGGTACTGCAG 59.824 55.000 13.48 13.48 46.94 4.41
4140 5533 0.108329 GCACCATACGGTACTGCAGT 60.108 55.000 25.12 25.12 46.94 4.40
4141 5534 1.640428 CACCATACGGTACTGCAGTG 58.360 55.000 29.57 15.20 46.94 3.66
4142 5535 0.535335 ACCATACGGTACTGCAGTGG 59.465 55.000 29.57 21.00 46.71 4.00
4143 5536 0.821517 CCATACGGTACTGCAGTGGA 59.178 55.000 29.57 10.05 0.00 4.02
4144 5537 1.412710 CCATACGGTACTGCAGTGGAT 59.587 52.381 29.57 12.13 0.00 3.41
4145 5538 2.545952 CCATACGGTACTGCAGTGGATC 60.546 54.545 29.57 9.85 0.00 3.36
4146 5539 2.139323 TACGGTACTGCAGTGGATCT 57.861 50.000 29.57 10.00 0.00 2.75
4147 5540 0.818296 ACGGTACTGCAGTGGATCTC 59.182 55.000 29.57 11.55 0.00 2.75
4148 5541 0.817654 CGGTACTGCAGTGGATCTCA 59.182 55.000 29.57 4.12 0.00 3.27
4149 5542 1.204704 CGGTACTGCAGTGGATCTCAA 59.795 52.381 29.57 3.27 0.00 3.02
4150 5543 2.622436 GGTACTGCAGTGGATCTCAAC 58.378 52.381 29.57 15.92 0.00 3.18
4151 5544 2.622436 GTACTGCAGTGGATCTCAACC 58.378 52.381 29.57 0.59 0.00 3.77
4152 5545 0.326264 ACTGCAGTGGATCTCAACCC 59.674 55.000 20.97 0.00 0.00 4.11
4153 5546 0.742281 CTGCAGTGGATCTCAACCCG 60.742 60.000 5.25 0.00 0.00 5.28
4154 5547 2.109126 GCAGTGGATCTCAACCCGC 61.109 63.158 0.00 0.00 0.00 6.13
4155 5548 1.296392 CAGTGGATCTCAACCCGCA 59.704 57.895 0.00 0.00 35.49 5.69
4156 5549 1.021390 CAGTGGATCTCAACCCGCAC 61.021 60.000 0.00 0.00 35.49 5.34
4157 5550 1.194781 AGTGGATCTCAACCCGCACT 61.195 55.000 0.00 0.00 35.49 4.40
4158 5551 0.321653 GTGGATCTCAACCCGCACTT 60.322 55.000 0.00 0.00 33.37 3.16
4159 5552 0.321564 TGGATCTCAACCCGCACTTG 60.322 55.000 0.00 0.00 0.00 3.16
4160 5553 1.026718 GGATCTCAACCCGCACTTGG 61.027 60.000 0.00 0.00 0.00 3.61
4161 5554 0.036388 GATCTCAACCCGCACTTGGA 60.036 55.000 0.00 0.00 0.00 3.53
4162 5555 0.321653 ATCTCAACCCGCACTTGGAC 60.322 55.000 0.00 0.00 0.00 4.02
4163 5556 1.966451 CTCAACCCGCACTTGGACC 60.966 63.158 0.00 0.00 0.00 4.46
4164 5557 3.353836 CAACCCGCACTTGGACCG 61.354 66.667 0.00 0.00 0.00 4.79
4165 5558 4.636435 AACCCGCACTTGGACCGG 62.636 66.667 0.00 0.00 41.60 5.28
4179 5572 3.240491 CCGGCTGGGTGGACATAT 58.760 61.111 2.57 0.00 0.00 1.78
4180 5573 1.531748 CCGGCTGGGTGGACATATT 59.468 57.895 2.57 0.00 0.00 1.28
4181 5574 0.535102 CCGGCTGGGTGGACATATTC 60.535 60.000 2.57 0.00 0.00 1.75
4182 5575 0.180171 CGGCTGGGTGGACATATTCA 59.820 55.000 0.00 0.00 0.00 2.57
4183 5576 1.408127 CGGCTGGGTGGACATATTCAA 60.408 52.381 0.00 0.00 0.00 2.69
4184 5577 2.024414 GGCTGGGTGGACATATTCAAC 58.976 52.381 0.00 0.00 0.00 3.18
4185 5578 2.357154 GGCTGGGTGGACATATTCAACT 60.357 50.000 0.00 0.00 0.00 3.16
4186 5579 3.118038 GGCTGGGTGGACATATTCAACTA 60.118 47.826 0.00 0.00 0.00 2.24
4187 5580 3.877508 GCTGGGTGGACATATTCAACTAC 59.122 47.826 0.00 0.00 0.00 2.73
4188 5581 4.384208 GCTGGGTGGACATATTCAACTACT 60.384 45.833 0.00 0.00 0.00 2.57
4189 5582 5.353394 TGGGTGGACATATTCAACTACTC 57.647 43.478 0.00 0.00 0.00 2.59
4190 5583 4.163458 TGGGTGGACATATTCAACTACTCC 59.837 45.833 0.00 0.00 0.00 3.85
4191 5584 4.444449 GGGTGGACATATTCAACTACTCCC 60.444 50.000 0.00 0.00 0.00 4.30
4192 5585 4.409247 GGTGGACATATTCAACTACTCCCT 59.591 45.833 0.00 0.00 0.00 4.20
4193 5586 5.453480 GGTGGACATATTCAACTACTCCCTC 60.453 48.000 0.00 0.00 0.00 4.30
4194 5587 4.654262 TGGACATATTCAACTACTCCCTCC 59.346 45.833 0.00 0.00 0.00 4.30
4195 5588 4.262079 GGACATATTCAACTACTCCCTCCG 60.262 50.000 0.00 0.00 0.00 4.63
4196 5589 4.543689 ACATATTCAACTACTCCCTCCGA 58.456 43.478 0.00 0.00 0.00 4.55
4197 5590 5.148502 ACATATTCAACTACTCCCTCCGAT 58.851 41.667 0.00 0.00 0.00 4.18
4198 5591 6.312529 ACATATTCAACTACTCCCTCCGATA 58.687 40.000 0.00 0.00 0.00 2.92
4199 5592 6.208994 ACATATTCAACTACTCCCTCCGATAC 59.791 42.308 0.00 0.00 0.00 2.24
4200 5593 2.941480 TCAACTACTCCCTCCGATACC 58.059 52.381 0.00 0.00 0.00 2.73
4201 5594 2.242965 TCAACTACTCCCTCCGATACCA 59.757 50.000 0.00 0.00 0.00 3.25
4202 5595 3.028850 CAACTACTCCCTCCGATACCAA 58.971 50.000 0.00 0.00 0.00 3.67
4203 5596 3.393426 ACTACTCCCTCCGATACCAAA 57.607 47.619 0.00 0.00 0.00 3.28
4204 5597 3.924922 ACTACTCCCTCCGATACCAAAT 58.075 45.455 0.00 0.00 0.00 2.32
4205 5598 4.296056 ACTACTCCCTCCGATACCAAATT 58.704 43.478 0.00 0.00 0.00 1.82
4206 5599 5.461327 ACTACTCCCTCCGATACCAAATTA 58.539 41.667 0.00 0.00 0.00 1.40
4207 5600 4.684484 ACTCCCTCCGATACCAAATTAC 57.316 45.455 0.00 0.00 0.00 1.89
4208 5601 4.296056 ACTCCCTCCGATACCAAATTACT 58.704 43.478 0.00 0.00 0.00 2.24
4209 5602 4.720273 ACTCCCTCCGATACCAAATTACTT 59.280 41.667 0.00 0.00 0.00 2.24
4210 5603 5.031066 TCCCTCCGATACCAAATTACTTG 57.969 43.478 0.00 0.00 34.52 3.16
4211 5604 3.564225 CCCTCCGATACCAAATTACTTGC 59.436 47.826 0.00 0.00 33.27 4.01
4212 5605 3.564225 CCTCCGATACCAAATTACTTGCC 59.436 47.826 0.00 0.00 33.27 4.52
4213 5606 3.199677 TCCGATACCAAATTACTTGCCG 58.800 45.455 0.00 0.00 33.27 5.69
4214 5607 2.286772 CCGATACCAAATTACTTGCCGC 60.287 50.000 0.00 0.00 33.27 6.53
4215 5608 2.353269 CGATACCAAATTACTTGCCGCA 59.647 45.455 0.00 0.00 33.27 5.69
4216 5609 3.546020 CGATACCAAATTACTTGCCGCAG 60.546 47.826 0.00 0.00 33.27 5.18
4217 5610 1.904287 ACCAAATTACTTGCCGCAGA 58.096 45.000 0.00 0.00 33.27 4.26
4218 5611 2.235016 ACCAAATTACTTGCCGCAGAA 58.765 42.857 0.00 0.00 33.27 3.02
4219 5612 2.625790 ACCAAATTACTTGCCGCAGAAA 59.374 40.909 0.00 0.00 33.27 2.52
4220 5613 3.068873 ACCAAATTACTTGCCGCAGAAAA 59.931 39.130 0.00 0.00 33.27 2.29
4221 5614 4.054671 CCAAATTACTTGCCGCAGAAAAA 58.945 39.130 0.00 0.00 33.27 1.94
4283 5676 6.823531 CGTTTAGATACGTCCATTTTTGTCA 58.176 36.000 0.00 0.00 36.80 3.58
4284 5677 7.461107 CGTTTAGATACGTCCATTTTTGTCAT 58.539 34.615 0.00 0.00 36.80 3.06
4285 5678 8.597227 CGTTTAGATACGTCCATTTTTGTCATA 58.403 33.333 0.00 0.00 36.80 2.15
4317 5710 9.559958 AATTTCAATTTTGCTAAGTATCAGTCG 57.440 29.630 0.00 0.00 0.00 4.18
4318 5711 7.899178 TTCAATTTTGCTAAGTATCAGTCGA 57.101 32.000 0.00 0.00 0.00 4.20
4319 5712 7.290857 TCAATTTTGCTAAGTATCAGTCGAC 57.709 36.000 7.70 7.70 0.00 4.20
4320 5713 6.312918 TCAATTTTGCTAAGTATCAGTCGACC 59.687 38.462 13.01 0.00 0.00 4.79
4321 5714 3.416119 TTGCTAAGTATCAGTCGACCG 57.584 47.619 13.01 1.05 0.00 4.79
4322 5715 2.635714 TGCTAAGTATCAGTCGACCGA 58.364 47.619 13.01 8.18 0.00 4.69
4323 5716 2.612672 TGCTAAGTATCAGTCGACCGAG 59.387 50.000 13.01 2.68 0.00 4.63
4324 5717 2.871022 GCTAAGTATCAGTCGACCGAGA 59.129 50.000 13.01 8.70 0.00 4.04
4325 5718 3.303263 GCTAAGTATCAGTCGACCGAGAC 60.303 52.174 16.84 16.84 41.23 3.36
4333 5726 2.915738 GTCGACCGAGACTTGTATGT 57.084 50.000 3.51 0.00 38.09 2.29
4334 5727 2.783333 GTCGACCGAGACTTGTATGTC 58.217 52.381 3.51 0.00 38.09 3.06
4344 5737 5.242069 AGACTTGTATGTCTCAGTCGATG 57.758 43.478 0.00 0.00 43.04 3.84
4345 5738 3.775202 ACTTGTATGTCTCAGTCGATGC 58.225 45.455 0.00 0.00 0.00 3.91
4346 5739 3.445450 ACTTGTATGTCTCAGTCGATGCT 59.555 43.478 0.00 0.00 0.00 3.79
4347 5740 4.640647 ACTTGTATGTCTCAGTCGATGCTA 59.359 41.667 0.00 0.00 0.00 3.49
4348 5741 5.300539 ACTTGTATGTCTCAGTCGATGCTAT 59.699 40.000 0.00 0.00 0.00 2.97
4349 5742 6.486993 ACTTGTATGTCTCAGTCGATGCTATA 59.513 38.462 0.00 0.00 0.00 1.31
4350 5743 7.175816 ACTTGTATGTCTCAGTCGATGCTATAT 59.824 37.037 0.00 0.00 0.00 0.86
4351 5744 7.454260 TGTATGTCTCAGTCGATGCTATATT 57.546 36.000 0.00 0.00 0.00 1.28
4352 5745 7.530863 TGTATGTCTCAGTCGATGCTATATTC 58.469 38.462 0.00 0.00 0.00 1.75
4353 5746 5.035784 TGTCTCAGTCGATGCTATATTCG 57.964 43.478 0.00 0.00 36.72 3.34
4354 5747 4.515567 TGTCTCAGTCGATGCTATATTCGT 59.484 41.667 0.00 0.00 36.74 3.85
4355 5748 5.008712 TGTCTCAGTCGATGCTATATTCGTT 59.991 40.000 0.00 0.00 36.74 3.85
4356 5749 5.915758 GTCTCAGTCGATGCTATATTCGTTT 59.084 40.000 0.00 0.00 36.74 3.60
4357 5750 5.915196 TCTCAGTCGATGCTATATTCGTTTG 59.085 40.000 0.00 0.00 36.74 2.93
4358 5751 4.982295 TCAGTCGATGCTATATTCGTTTGG 59.018 41.667 0.00 0.00 36.74 3.28
4359 5752 4.745125 CAGTCGATGCTATATTCGTTTGGT 59.255 41.667 0.00 0.00 36.74 3.67
4360 5753 4.982916 AGTCGATGCTATATTCGTTTGGTC 59.017 41.667 0.00 0.00 36.74 4.02
4361 5754 4.982916 GTCGATGCTATATTCGTTTGGTCT 59.017 41.667 0.00 0.00 36.74 3.85
4362 5755 5.462398 GTCGATGCTATATTCGTTTGGTCTT 59.538 40.000 0.00 0.00 36.74 3.01
4363 5756 6.639686 GTCGATGCTATATTCGTTTGGTCTTA 59.360 38.462 0.00 0.00 36.74 2.10
4364 5757 6.639686 TCGATGCTATATTCGTTTGGTCTTAC 59.360 38.462 0.00 0.00 36.74 2.34
4365 5758 6.398621 CGATGCTATATTCGTTTGGTCTTACG 60.399 42.308 0.00 0.00 39.03 3.18
4366 5759 5.653507 TGCTATATTCGTTTGGTCTTACGT 58.346 37.500 0.00 0.00 38.79 3.57
4367 5760 5.517411 TGCTATATTCGTTTGGTCTTACGTG 59.483 40.000 0.00 0.00 38.79 4.49
4368 5761 5.051240 GCTATATTCGTTTGGTCTTACGTGG 60.051 44.000 0.00 0.00 38.79 4.94
4369 5762 2.886862 TTCGTTTGGTCTTACGTGGA 57.113 45.000 0.00 0.00 38.79 4.02
4370 5763 2.427232 TCGTTTGGTCTTACGTGGAG 57.573 50.000 0.00 0.00 38.79 3.86
4371 5764 1.955778 TCGTTTGGTCTTACGTGGAGA 59.044 47.619 0.00 0.00 38.79 3.71
4372 5765 2.559668 TCGTTTGGTCTTACGTGGAGAT 59.440 45.455 0.00 0.00 38.79 2.75
4373 5766 2.921754 CGTTTGGTCTTACGTGGAGATC 59.078 50.000 0.00 2.45 33.33 2.75
4374 5767 3.367087 CGTTTGGTCTTACGTGGAGATCT 60.367 47.826 13.15 0.00 33.33 2.75
4375 5768 3.868757 TTGGTCTTACGTGGAGATCTG 57.131 47.619 0.00 0.00 0.00 2.90
4376 5769 2.803956 TGGTCTTACGTGGAGATCTGT 58.196 47.619 0.00 0.00 0.00 3.41
4377 5770 2.492088 TGGTCTTACGTGGAGATCTGTG 59.508 50.000 0.00 0.00 0.00 3.66
4378 5771 2.531206 GTCTTACGTGGAGATCTGTGC 58.469 52.381 0.00 0.00 0.00 4.57
4379 5772 2.094700 GTCTTACGTGGAGATCTGTGCA 60.095 50.000 0.00 0.00 0.00 4.57
4380 5773 2.560981 TCTTACGTGGAGATCTGTGCAA 59.439 45.455 0.00 0.00 0.00 4.08
4381 5774 3.006430 TCTTACGTGGAGATCTGTGCAAA 59.994 43.478 0.00 0.00 0.00 3.68
4382 5775 1.800805 ACGTGGAGATCTGTGCAAAG 58.199 50.000 0.00 0.00 0.00 2.77
4383 5776 1.070758 ACGTGGAGATCTGTGCAAAGT 59.929 47.619 0.00 0.00 0.00 2.66
4384 5777 2.146342 CGTGGAGATCTGTGCAAAGTT 58.854 47.619 0.00 0.00 0.00 2.66
4385 5778 2.549754 CGTGGAGATCTGTGCAAAGTTT 59.450 45.455 0.00 0.00 0.00 2.66
4386 5779 3.003689 CGTGGAGATCTGTGCAAAGTTTT 59.996 43.478 0.00 0.00 0.00 2.43
4387 5780 4.498009 CGTGGAGATCTGTGCAAAGTTTTT 60.498 41.667 0.00 0.00 0.00 1.94
4432 5825 9.890629 TTTCTTATATACTGATCTGTGCAAAGT 57.109 29.630 14.91 0.39 0.00 2.66
4433 5826 9.890629 TTCTTATATACTGATCTGTGCAAAGTT 57.109 29.630 14.91 0.00 0.00 2.66
4434 5827 9.890629 TCTTATATACTGATCTGTGCAAAGTTT 57.109 29.630 14.91 0.00 0.00 2.66
4437 5830 8.798859 ATATACTGATCTGTGCAAAGTTTTCT 57.201 30.769 14.91 0.00 0.00 2.52
4438 5831 5.841957 ACTGATCTGTGCAAAGTTTTCTT 57.158 34.783 3.21 0.00 42.58 2.52
4440 5833 6.633856 ACTGATCTGTGCAAAGTTTTCTTTT 58.366 32.000 3.21 0.00 46.55 2.27
4441 5834 7.099120 ACTGATCTGTGCAAAGTTTTCTTTTT 58.901 30.769 3.21 0.00 46.55 1.94
4490 5883 7.730364 ACTATGTTACTTGACTGAAACTTGG 57.270 36.000 0.00 0.00 0.00 3.61
4491 5884 7.280356 ACTATGTTACTTGACTGAAACTTGGT 58.720 34.615 0.00 0.00 0.00 3.67
4492 5885 7.773690 ACTATGTTACTTGACTGAAACTTGGTT 59.226 33.333 0.00 0.00 0.00 3.67
4493 5886 9.268268 CTATGTTACTTGACTGAAACTTGGTTA 57.732 33.333 0.00 0.00 0.00 2.85
4494 5887 7.925043 TGTTACTTGACTGAAACTTGGTTAA 57.075 32.000 0.00 0.00 0.00 2.01
4495 5888 7.981142 TGTTACTTGACTGAAACTTGGTTAAG 58.019 34.615 0.00 0.00 39.86 1.85
4497 5890 6.679327 ACTTGACTGAAACTTGGTTAAGTC 57.321 37.500 8.58 8.58 46.14 3.01
4498 5891 6.415573 ACTTGACTGAAACTTGGTTAAGTCT 58.584 36.000 14.85 0.00 46.14 3.24
4499 5892 6.539103 ACTTGACTGAAACTTGGTTAAGTCTC 59.461 38.462 14.85 0.00 46.14 3.36
4500 5893 5.984725 TGACTGAAACTTGGTTAAGTCTCA 58.015 37.500 14.85 0.00 46.14 3.27
4501 5894 6.411376 TGACTGAAACTTGGTTAAGTCTCAA 58.589 36.000 14.85 0.00 46.14 3.02
4502 5895 7.054124 TGACTGAAACTTGGTTAAGTCTCAAT 58.946 34.615 14.85 0.00 46.14 2.57
4503 5896 7.226720 TGACTGAAACTTGGTTAAGTCTCAATC 59.773 37.037 14.85 0.20 46.14 2.67
4504 5897 6.202954 ACTGAAACTTGGTTAAGTCTCAATCG 59.797 38.462 0.00 0.00 46.14 3.34
4505 5898 6.285224 TGAAACTTGGTTAAGTCTCAATCGA 58.715 36.000 0.00 0.00 46.14 3.59
4506 5899 6.202188 TGAAACTTGGTTAAGTCTCAATCGAC 59.798 38.462 0.00 0.00 46.14 4.20
4507 5900 5.470047 ACTTGGTTAAGTCTCAATCGACT 57.530 39.130 0.00 0.00 43.53 4.18
4508 5901 5.230942 ACTTGGTTAAGTCTCAATCGACTG 58.769 41.667 0.00 0.00 43.53 3.51
4509 5902 5.010719 ACTTGGTTAAGTCTCAATCGACTGA 59.989 40.000 0.00 0.00 43.53 3.41
4510 5903 5.060662 TGGTTAAGTCTCAATCGACTGAG 57.939 43.478 17.55 17.55 43.14 3.35
4511 5904 8.871851 ACTTGGTTAAGTCTCAATCGACTGAGA 61.872 40.741 21.83 21.83 43.53 3.27
4517 5910 4.966965 TCTCAATCGACTGAGACCTAAC 57.033 45.455 21.83 0.00 45.45 2.34
4518 5911 3.695060 TCTCAATCGACTGAGACCTAACC 59.305 47.826 21.83 0.00 45.45 2.85
4519 5912 3.427573 TCAATCGACTGAGACCTAACCA 58.572 45.455 0.00 0.00 0.00 3.67
4520 5913 3.192844 TCAATCGACTGAGACCTAACCAC 59.807 47.826 0.00 0.00 0.00 4.16
4521 5914 2.281539 TCGACTGAGACCTAACCACA 57.718 50.000 0.00 0.00 0.00 4.17
4522 5915 1.884579 TCGACTGAGACCTAACCACAC 59.115 52.381 0.00 0.00 0.00 3.82
4523 5916 1.067776 CGACTGAGACCTAACCACACC 60.068 57.143 0.00 0.00 0.00 4.16
4524 5917 1.275573 GACTGAGACCTAACCACACCC 59.724 57.143 0.00 0.00 0.00 4.61
4525 5918 1.348064 CTGAGACCTAACCACACCCA 58.652 55.000 0.00 0.00 0.00 4.51
4526 5919 1.909302 CTGAGACCTAACCACACCCAT 59.091 52.381 0.00 0.00 0.00 4.00
4527 5920 3.104512 CTGAGACCTAACCACACCCATA 58.895 50.000 0.00 0.00 0.00 2.74
4528 5921 3.517901 CTGAGACCTAACCACACCCATAA 59.482 47.826 0.00 0.00 0.00 1.90
4529 5922 3.911260 TGAGACCTAACCACACCCATAAA 59.089 43.478 0.00 0.00 0.00 1.40
4530 5923 4.351407 TGAGACCTAACCACACCCATAAAA 59.649 41.667 0.00 0.00 0.00 1.52
4531 5924 5.014755 TGAGACCTAACCACACCCATAAAAT 59.985 40.000 0.00 0.00 0.00 1.82
4532 5925 5.899278 AGACCTAACCACACCCATAAAATT 58.101 37.500 0.00 0.00 0.00 1.82
4533 5926 6.319715 AGACCTAACCACACCCATAAAATTT 58.680 36.000 0.00 0.00 0.00 1.82
4534 5927 7.471890 AGACCTAACCACACCCATAAAATTTA 58.528 34.615 0.00 0.00 0.00 1.40
4535 5928 7.395206 AGACCTAACCACACCCATAAAATTTAC 59.605 37.037 0.00 0.00 0.00 2.01
4536 5929 7.011382 ACCTAACCACACCCATAAAATTTACA 58.989 34.615 0.00 0.00 0.00 2.41
4537 5930 7.509659 ACCTAACCACACCCATAAAATTTACAA 59.490 33.333 0.00 0.00 0.00 2.41
4538 5931 8.536175 CCTAACCACACCCATAAAATTTACAAT 58.464 33.333 0.00 0.00 0.00 2.71
4539 5932 9.936759 CTAACCACACCCATAAAATTTACAATT 57.063 29.630 0.00 0.00 0.00 2.32
4557 5950 9.938670 TTTACAATTATATATGTGTTTGTCCGC 57.061 29.630 0.00 0.00 0.00 5.54
4558 5951 7.561021 ACAATTATATATGTGTTTGTCCGCA 57.439 32.000 0.00 0.00 0.00 5.69
4559 5952 7.414436 ACAATTATATATGTGTTTGTCCGCAC 58.586 34.615 0.00 0.00 36.26 5.34
4560 5953 7.282224 ACAATTATATATGTGTTTGTCCGCACT 59.718 33.333 0.00 0.00 36.63 4.40
4561 5954 7.801716 ATTATATATGTGTTTGTCCGCACTT 57.198 32.000 0.00 0.00 36.63 3.16
4562 5955 7.618502 TTATATATGTGTTTGTCCGCACTTT 57.381 32.000 0.00 0.00 36.63 2.66
4563 5956 8.719560 TTATATATGTGTTTGTCCGCACTTTA 57.280 30.769 0.00 0.00 36.63 1.85
4564 5957 7.801716 ATATATGTGTTTGTCCGCACTTTAT 57.198 32.000 0.00 0.00 36.63 1.40
4565 5958 4.846779 ATGTGTTTGTCCGCACTTTATT 57.153 36.364 0.00 0.00 36.63 1.40
4566 5959 4.640789 TGTGTTTGTCCGCACTTTATTT 57.359 36.364 0.00 0.00 36.63 1.40
4567 5960 4.355437 TGTGTTTGTCCGCACTTTATTTG 58.645 39.130 0.00 0.00 36.63 2.32
4568 5961 4.142359 TGTGTTTGTCCGCACTTTATTTGT 60.142 37.500 0.00 0.00 36.63 2.83
4569 5962 4.439776 GTGTTTGTCCGCACTTTATTTGTC 59.560 41.667 0.00 0.00 33.22 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
48 49 5.484715 CAATTGGCATGATATTCCAATCCC 58.515 41.667 13.03 0.00 46.55 3.85
54 55 5.482878 AGGATTCCAATTGGCATGATATTCC 59.517 40.000 20.33 15.06 34.44 3.01
59 60 3.822735 CGTAGGATTCCAATTGGCATGAT 59.177 43.478 20.33 10.42 34.44 2.45
132 142 3.310774 CCACAGAAAATCTAGCATCCACG 59.689 47.826 0.00 0.00 0.00 4.94
421 1584 6.856426 ACGTTCTTTTCTTACTTATGCTTTGC 59.144 34.615 0.00 0.00 0.00 3.68
426 1589 6.884187 TGACACGTTCTTTTCTTACTTATGC 58.116 36.000 0.00 0.00 0.00 3.14
868 2073 1.133945 CGATGGAGGAGGTGAGAGAGA 60.134 57.143 0.00 0.00 0.00 3.10
869 2074 1.133945 TCGATGGAGGAGGTGAGAGAG 60.134 57.143 0.00 0.00 0.00 3.20
870 2075 0.919710 TCGATGGAGGAGGTGAGAGA 59.080 55.000 0.00 0.00 0.00 3.10
871 2076 1.885887 GATCGATGGAGGAGGTGAGAG 59.114 57.143 0.54 0.00 0.00 3.20
872 2077 1.479573 GGATCGATGGAGGAGGTGAGA 60.480 57.143 0.54 0.00 0.00 3.27
873 2078 0.965439 GGATCGATGGAGGAGGTGAG 59.035 60.000 0.54 0.00 0.00 3.51
874 2079 0.261696 TGGATCGATGGAGGAGGTGA 59.738 55.000 0.54 0.00 0.00 4.02
875 2080 1.069823 CTTGGATCGATGGAGGAGGTG 59.930 57.143 0.54 0.00 0.00 4.00
1337 2567 1.226773 GCAGCCGGCAAGCTATTTG 60.227 57.895 31.54 16.65 42.61 2.32
1338 2568 3.200522 GCAGCCGGCAAGCTATTT 58.799 55.556 31.54 0.76 42.61 1.40
1380 2610 3.555324 TGAACGGAGCAGGTGCCA 61.555 61.111 0.00 0.00 43.38 4.92
1387 2617 2.350895 CATGGGGTGAACGGAGCA 59.649 61.111 0.00 0.00 0.00 4.26
1909 3152 4.520492 AGCATTTCCATCGTCAAAAGTTCT 59.480 37.500 0.00 0.00 0.00 3.01
2112 3369 2.093106 AGAGGACGACAGGTGTATCAC 58.907 52.381 0.00 0.00 0.00 3.06
2120 3377 0.972983 ATGGTGGAGAGGACGACAGG 60.973 60.000 0.00 0.00 0.00 4.00
2149 3406 5.707066 AGCCTCTAAAGGATTGAGAACAT 57.293 39.130 0.00 0.00 46.67 2.71
2199 3456 8.359642 GCTATTCATTATGGAAAGCACCAAATA 58.640 33.333 0.00 0.00 43.47 1.40
2225 3482 5.568677 TGAATGCTCGAATTTGAAAATCACG 59.431 36.000 0.00 8.17 33.08 4.35
2228 3485 5.497597 GCGTGAATGCTCGAATTTGAAAATC 60.498 40.000 0.00 0.00 33.14 2.17
2240 3497 0.807275 TGAGGATGCGTGAATGCTCG 60.807 55.000 5.06 0.00 45.26 5.03
2319 3580 8.853126 CATATAAACATGTGTTGATTCCATCCT 58.147 33.333 0.00 0.00 38.44 3.24
2343 3604 0.662619 CGTCCAACTGTGTTGTGCAT 59.337 50.000 9.20 0.00 0.00 3.96
2348 3609 1.334059 GCATCACGTCCAACTGTGTTG 60.334 52.381 3.69 3.69 38.31 3.33
2351 3612 1.577328 GGGCATCACGTCCAACTGTG 61.577 60.000 0.00 0.00 40.18 3.66
2408 3669 2.042569 AGGAAATCCCAAGGTGGTAACC 59.957 50.000 0.00 0.00 41.68 2.85
2435 3700 8.454570 AAATCATGATCAAGTACATGTGCATA 57.545 30.769 16.62 1.20 42.75 3.14
2504 3775 6.208797 ACCATTCCTTGTTTTAACCTAGAAGC 59.791 38.462 0.00 0.00 0.00 3.86
2538 3809 1.815003 CAAACATGAAGAGGCTGTCCC 59.185 52.381 0.00 0.00 0.00 4.46
2644 3916 7.343357 TCCACCGTGAAAGGATATATCTTTTT 58.657 34.615 20.17 16.07 36.41 1.94
2645 3917 6.895782 TCCACCGTGAAAGGATATATCTTTT 58.104 36.000 19.52 19.52 38.57 2.27
2646 3918 6.099845 ACTCCACCGTGAAAGGATATATCTTT 59.900 38.462 12.42 8.41 37.18 2.52
2647 3919 5.602978 ACTCCACCGTGAAAGGATATATCTT 59.397 40.000 12.42 1.81 34.73 2.40
2649 3921 5.470047 ACTCCACCGTGAAAGGATATATC 57.530 43.478 3.96 3.96 34.73 1.63
2650 3922 5.888982 AACTCCACCGTGAAAGGATATAT 57.111 39.130 0.00 0.00 34.73 0.86
2651 3923 5.687166 AAACTCCACCGTGAAAGGATATA 57.313 39.130 0.00 0.00 34.73 0.86
2652 3924 4.569719 AAACTCCACCGTGAAAGGATAT 57.430 40.909 0.00 0.00 34.73 1.63
2653 3925 4.360951 AAAACTCCACCGTGAAAGGATA 57.639 40.909 0.00 0.00 34.73 2.59
2654 3926 2.951229 AAACTCCACCGTGAAAGGAT 57.049 45.000 0.00 0.00 34.73 3.24
2655 3927 2.721425 AAAACTCCACCGTGAAAGGA 57.279 45.000 0.00 0.00 34.73 3.36
2656 3928 3.004002 GGTAAAAACTCCACCGTGAAAGG 59.996 47.826 0.00 0.00 37.30 3.11
2657 3929 3.004002 GGGTAAAAACTCCACCGTGAAAG 59.996 47.826 0.00 0.00 32.84 2.62
2658 3930 2.950975 GGGTAAAAACTCCACCGTGAAA 59.049 45.455 0.00 0.00 32.84 2.69
2659 3931 2.092538 TGGGTAAAAACTCCACCGTGAA 60.093 45.455 0.00 0.00 32.84 3.18
2660 3932 1.489649 TGGGTAAAAACTCCACCGTGA 59.510 47.619 0.00 0.00 32.84 4.35
2661 3933 1.970092 TGGGTAAAAACTCCACCGTG 58.030 50.000 0.00 0.00 32.84 4.94
2662 3934 2.732844 TTGGGTAAAAACTCCACCGT 57.267 45.000 0.00 0.00 32.84 4.83
2685 3957 4.689612 TCTAGAGATTATGTTGCCACCC 57.310 45.455 0.00 0.00 0.00 4.61
2702 3974 1.962100 GGGGAAGGTGTACCGATCTAG 59.038 57.143 8.93 0.00 42.08 2.43
2710 3982 1.264295 AGTCGAAGGGGAAGGTGTAC 58.736 55.000 0.00 0.00 0.00 2.90
2711 3983 2.019807 AAGTCGAAGGGGAAGGTGTA 57.980 50.000 0.00 0.00 0.00 2.90
2713 3985 1.523758 CAAAGTCGAAGGGGAAGGTG 58.476 55.000 0.00 0.00 0.00 4.00
2714 3986 0.400594 CCAAAGTCGAAGGGGAAGGT 59.599 55.000 0.00 0.00 0.00 3.50
2715 3987 0.400594 ACCAAAGTCGAAGGGGAAGG 59.599 55.000 0.00 0.00 0.00 3.46
2716 3988 3.629142 ATACCAAAGTCGAAGGGGAAG 57.371 47.619 0.00 0.00 0.00 3.46
2718 3990 3.036091 CCTATACCAAAGTCGAAGGGGA 58.964 50.000 0.00 0.00 0.00 4.81
2719 3991 2.484947 GCCTATACCAAAGTCGAAGGGG 60.485 54.545 0.00 0.00 0.00 4.79
2720 3992 2.802057 CGCCTATACCAAAGTCGAAGGG 60.802 54.545 0.00 0.00 0.00 3.95
2721 3993 2.159142 ACGCCTATACCAAAGTCGAAGG 60.159 50.000 0.00 0.00 0.00 3.46
2722 3994 3.160777 ACGCCTATACCAAAGTCGAAG 57.839 47.619 0.00 0.00 0.00 3.79
2723 3995 3.696051 ACTACGCCTATACCAAAGTCGAA 59.304 43.478 0.00 0.00 0.00 3.71
2724 3996 3.065786 CACTACGCCTATACCAAAGTCGA 59.934 47.826 0.00 0.00 0.00 4.20
2734 4006 5.909621 AGAAGACAAACACTACGCCTATA 57.090 39.130 0.00 0.00 0.00 1.31
2741 4013 7.444487 AGGAAAACCATAGAAGACAAACACTAC 59.556 37.037 0.00 0.00 0.00 2.73
2801 4073 4.816385 ACACATCCACACTTAAACAGTCTG 59.184 41.667 0.00 0.00 30.92 3.51
2848 4120 6.089016 CAGATACAAAGCAATTGAGCAACAAG 59.911 38.462 10.34 0.00 41.85 3.16
2849 4121 5.921976 CAGATACAAAGCAATTGAGCAACAA 59.078 36.000 10.34 0.00 41.85 2.83
2953 4226 5.103813 TGTTCTATAGGCTAGTACCACTCCA 60.104 44.000 0.00 0.00 0.00 3.86
3052 4380 6.815880 TGGTTGGGACCTCTCTATCATATAT 58.184 40.000 0.00 0.00 46.66 0.86
3053 4381 6.227624 TGGTTGGGACCTCTCTATCATATA 57.772 41.667 0.00 0.00 46.66 0.86
3181 4509 6.312426 ACTCAGATTAAGAATTCAACAGCTCG 59.688 38.462 8.44 0.00 0.00 5.03
3199 4527 2.621338 CGGCATACAACACACTCAGAT 58.379 47.619 0.00 0.00 0.00 2.90
3208 4536 0.541392 ATCAGAGGCGGCATACAACA 59.459 50.000 13.08 0.00 0.00 3.33
3534 4863 1.344438 GACCTACATGGATCATGGCGA 59.656 52.381 11.85 0.00 45.16 5.54
3543 4872 0.033503 TGCCTCGAGACCTACATGGA 60.034 55.000 15.71 0.00 39.71 3.41
3591 4920 7.933577 AGTGAGACTTGAGTAGAGATCTCTATG 59.066 40.741 30.31 20.33 43.32 2.23
3611 4943 2.295629 GCATCGATCTGATCCAGTGAGA 59.704 50.000 11.84 3.01 34.13 3.27
3646 4978 6.238103 CCGTTATAATGATTGAAGAACTGCGT 60.238 38.462 6.24 0.00 0.00 5.24
3647 4979 6.129393 CCGTTATAATGATTGAAGAACTGCG 58.871 40.000 6.24 0.00 0.00 5.18
3660 4992 6.166279 GCAAGAGATCATCCCGTTATAATGA 58.834 40.000 6.24 0.00 34.17 2.57
3664 4996 5.482006 CATGCAAGAGATCATCCCGTTATA 58.518 41.667 0.00 0.00 0.00 0.98
3680 5012 5.447624 TGGATAAATGATCTGCATGCAAG 57.552 39.130 22.88 15.46 37.28 4.01
3690 5022 6.620303 GCTTGCTTCTCGATGGATAAATGATC 60.620 42.308 0.00 0.00 0.00 2.92
3696 5028 3.827008 AGCTTGCTTCTCGATGGATAA 57.173 42.857 0.00 0.00 0.00 1.75
3703 5035 2.092323 TGTAGCTAGCTTGCTTCTCGA 58.908 47.619 27.19 6.73 43.74 4.04
3706 5038 3.131400 GGTACTGTAGCTAGCTTGCTTCT 59.869 47.826 27.19 10.35 43.74 2.85
3727 5096 4.141390 ACTTGATTTATCCTAGCCAGGTGG 60.141 45.833 0.00 0.00 43.18 4.61
3728 5097 5.041191 ACTTGATTTATCCTAGCCAGGTG 57.959 43.478 0.00 0.00 43.18 4.00
3848 5218 3.947910 TCTAATCAGAAACCGAACCGT 57.052 42.857 0.00 0.00 0.00 4.83
3881 5251 5.027293 TGATCGATGTGAAGACAATCCAT 57.973 39.130 0.54 0.00 35.11 3.41
3900 5270 6.045072 TCCTTGTGTACTAACGGAAATGAT 57.955 37.500 0.00 0.00 0.00 2.45
3903 5273 6.482308 GCATATCCTTGTGTACTAACGGAAAT 59.518 38.462 0.00 0.00 0.00 2.17
3944 5317 0.894835 TAGCTCGACTGTCAATGGCA 59.105 50.000 8.73 0.00 0.00 4.92
3989 5382 6.673106 AGAGCATTACATCACTGATAGTACG 58.327 40.000 0.00 0.00 0.00 3.67
4008 5401 2.765699 TGTATGGCTGACACATAGAGCA 59.234 45.455 0.00 0.00 34.20 4.26
4009 5402 3.126831 GTGTATGGCTGACACATAGAGC 58.873 50.000 14.88 0.00 45.36 4.09
4016 5409 1.806542 CCAAGTGTGTATGGCTGACAC 59.193 52.381 13.44 13.44 46.07 3.67
4017 5410 1.696884 TCCAAGTGTGTATGGCTGACA 59.303 47.619 0.00 0.00 36.62 3.58
4018 5411 2.350522 CTCCAAGTGTGTATGGCTGAC 58.649 52.381 0.00 0.00 36.62 3.51
4019 5412 1.278985 CCTCCAAGTGTGTATGGCTGA 59.721 52.381 0.00 0.00 36.62 4.26
4020 5413 1.679944 CCCTCCAAGTGTGTATGGCTG 60.680 57.143 0.00 0.00 36.62 4.85
4021 5414 0.620556 CCCTCCAAGTGTGTATGGCT 59.379 55.000 0.00 0.00 36.62 4.75
4022 5415 0.328258 ACCCTCCAAGTGTGTATGGC 59.672 55.000 0.00 0.00 36.62 4.40
4023 5416 2.879103 AACCCTCCAAGTGTGTATGG 57.121 50.000 0.00 0.00 38.09 2.74
4024 5417 3.517901 TCCTAACCCTCCAAGTGTGTATG 59.482 47.826 0.00 0.00 0.00 2.39
4025 5418 3.798515 TCCTAACCCTCCAAGTGTGTAT 58.201 45.455 0.00 0.00 0.00 2.29
4026 5419 3.263369 TCCTAACCCTCCAAGTGTGTA 57.737 47.619 0.00 0.00 0.00 2.90
4027 5420 2.112279 TCCTAACCCTCCAAGTGTGT 57.888 50.000 0.00 0.00 0.00 3.72
4028 5421 2.092914 GGATCCTAACCCTCCAAGTGTG 60.093 54.545 3.84 0.00 0.00 3.82
4029 5422 2.197465 GGATCCTAACCCTCCAAGTGT 58.803 52.381 3.84 0.00 0.00 3.55
4030 5423 2.436173 GAGGATCCTAACCCTCCAAGTG 59.564 54.545 16.16 0.00 42.35 3.16
4031 5424 2.765502 GAGGATCCTAACCCTCCAAGT 58.234 52.381 16.16 0.00 42.35 3.16
4037 5430 1.008938 ACTGCAGAGGATCCTAACCCT 59.991 52.381 23.35 4.31 33.66 4.34
4038 5431 1.501582 ACTGCAGAGGATCCTAACCC 58.498 55.000 23.35 1.49 33.66 4.11
4039 5432 3.068873 CAGTACTGCAGAGGATCCTAACC 59.931 52.174 23.35 1.92 33.66 2.85
4040 5433 3.702045 ACAGTACTGCAGAGGATCCTAAC 59.298 47.826 23.35 7.75 33.66 2.34
4041 5434 3.982516 ACAGTACTGCAGAGGATCCTAA 58.017 45.455 23.35 0.00 33.66 2.69
4042 5435 3.671740 ACAGTACTGCAGAGGATCCTA 57.328 47.619 23.35 0.00 33.66 2.94
4043 5436 2.541233 ACAGTACTGCAGAGGATCCT 57.459 50.000 23.35 16.13 33.66 3.24
4044 5437 3.024547 TGTACAGTACTGCAGAGGATCC 58.975 50.000 23.35 2.48 33.66 3.36
4045 5438 3.697045 ACTGTACAGTACTGCAGAGGATC 59.303 47.826 26.91 5.55 40.43 3.36
4046 5439 3.445450 CACTGTACAGTACTGCAGAGGAT 59.555 47.826 27.48 10.38 40.20 3.24
4047 5440 2.820197 CACTGTACAGTACTGCAGAGGA 59.180 50.000 27.48 1.69 40.20 3.71
4048 5441 2.558795 ACACTGTACAGTACTGCAGAGG 59.441 50.000 27.48 21.55 40.20 3.69
4049 5442 3.924918 ACACTGTACAGTACTGCAGAG 57.075 47.619 27.48 22.57 40.20 3.35
4050 5443 3.383505 ACAACACTGTACAGTACTGCAGA 59.616 43.478 27.48 13.67 40.20 4.26
4051 5444 3.717707 ACAACACTGTACAGTACTGCAG 58.282 45.455 27.48 22.32 40.20 4.41
4052 5445 3.812156 ACAACACTGTACAGTACTGCA 57.188 42.857 27.48 12.39 40.20 4.41
4065 5458 1.484653 TGGCAGTGACTGTACAACACT 59.515 47.619 21.82 21.82 44.15 3.55
4066 5459 1.948104 TGGCAGTGACTGTACAACAC 58.052 50.000 14.82 18.96 33.43 3.32
4067 5460 2.158827 ACATGGCAGTGACTGTACAACA 60.159 45.455 14.82 6.51 33.43 3.33
4068 5461 2.224079 CACATGGCAGTGACTGTACAAC 59.776 50.000 14.82 0.00 42.05 3.32
4069 5462 2.493035 CACATGGCAGTGACTGTACAA 58.507 47.619 14.82 0.00 42.05 2.41
4070 5463 1.270785 CCACATGGCAGTGACTGTACA 60.271 52.381 14.82 13.73 42.05 2.90
4071 5464 1.442769 CCACATGGCAGTGACTGTAC 58.557 55.000 14.82 8.35 42.05 2.90
4072 5465 0.324614 CCCACATGGCAGTGACTGTA 59.675 55.000 14.82 4.32 42.05 2.74
4073 5466 1.073722 CCCACATGGCAGTGACTGT 59.926 57.895 14.82 2.12 42.05 3.55
4074 5467 0.957395 GTCCCACATGGCAGTGACTG 60.957 60.000 8.52 8.52 42.05 3.51
4075 5468 1.376466 GTCCCACATGGCAGTGACT 59.624 57.895 15.61 0.00 42.05 3.41
4076 5469 1.675641 GGTCCCACATGGCAGTGAC 60.676 63.158 15.61 0.00 42.05 3.67
4077 5470 1.847506 AGGTCCCACATGGCAGTGA 60.848 57.895 15.61 0.00 42.05 3.41
4078 5471 1.676635 CAGGTCCCACATGGCAGTG 60.677 63.158 0.00 9.29 39.21 3.66
4079 5472 2.759114 CAGGTCCCACATGGCAGT 59.241 61.111 0.00 0.00 0.00 4.40
4080 5473 2.044650 CCAGGTCCCACATGGCAG 60.045 66.667 0.00 0.00 43.49 4.85
4090 5483 3.645268 GACATGTGGGGCCAGGTCC 62.645 68.421 1.15 0.00 39.56 4.46
4091 5484 2.044946 GACATGTGGGGCCAGGTC 60.045 66.667 1.15 0.00 38.73 3.85
4092 5485 2.215451 GATGACATGTGGGGCCAGGT 62.215 60.000 1.15 0.00 30.97 4.00
4093 5486 1.454479 GATGACATGTGGGGCCAGG 60.454 63.158 1.15 0.00 0.00 4.45
4094 5487 1.454479 GGATGACATGTGGGGCCAG 60.454 63.158 1.15 0.00 0.00 4.85
4095 5488 2.237229 TGGATGACATGTGGGGCCA 61.237 57.895 1.15 2.39 0.00 5.36
4096 5489 1.754234 GTGGATGACATGTGGGGCC 60.754 63.158 1.15 0.00 0.00 5.80
4097 5490 1.001020 TGTGGATGACATGTGGGGC 60.001 57.895 1.15 0.00 0.00 5.80
4098 5491 0.329261 AGTGTGGATGACATGTGGGG 59.671 55.000 1.15 0.00 36.78 4.96
4099 5492 2.027285 TGTAGTGTGGATGACATGTGGG 60.027 50.000 1.15 0.00 36.78 4.61
4100 5493 3.264947 CTGTAGTGTGGATGACATGTGG 58.735 50.000 1.15 0.00 36.78 4.17
4101 5494 2.674852 GCTGTAGTGTGGATGACATGTG 59.325 50.000 1.15 0.00 36.78 3.21
4102 5495 2.302733 TGCTGTAGTGTGGATGACATGT 59.697 45.455 0.00 0.00 36.78 3.21
4103 5496 2.674852 GTGCTGTAGTGTGGATGACATG 59.325 50.000 0.00 0.00 36.78 3.21
4104 5497 2.355108 GGTGCTGTAGTGTGGATGACAT 60.355 50.000 0.00 0.00 36.78 3.06
4105 5498 1.001974 GGTGCTGTAGTGTGGATGACA 59.998 52.381 0.00 0.00 0.00 3.58
4106 5499 1.001974 TGGTGCTGTAGTGTGGATGAC 59.998 52.381 0.00 0.00 0.00 3.06
4107 5500 1.347062 TGGTGCTGTAGTGTGGATGA 58.653 50.000 0.00 0.00 0.00 2.92
4108 5501 2.408271 ATGGTGCTGTAGTGTGGATG 57.592 50.000 0.00 0.00 0.00 3.51
4109 5502 2.159099 CGTATGGTGCTGTAGTGTGGAT 60.159 50.000 0.00 0.00 0.00 3.41
4110 5503 1.203758 CGTATGGTGCTGTAGTGTGGA 59.796 52.381 0.00 0.00 0.00 4.02
4111 5504 1.640428 CGTATGGTGCTGTAGTGTGG 58.360 55.000 0.00 0.00 0.00 4.17
4112 5505 1.640428 CCGTATGGTGCTGTAGTGTG 58.360 55.000 0.00 0.00 0.00 3.82
4124 5517 0.821517 TCCACTGCAGTACCGTATGG 59.178 55.000 21.20 14.86 42.84 2.74
4125 5518 2.362397 AGATCCACTGCAGTACCGTATG 59.638 50.000 21.20 5.05 0.00 2.39
4126 5519 2.623889 GAGATCCACTGCAGTACCGTAT 59.376 50.000 21.20 8.56 0.00 3.06
4127 5520 2.022195 GAGATCCACTGCAGTACCGTA 58.978 52.381 21.20 3.61 0.00 4.02
4128 5521 0.818296 GAGATCCACTGCAGTACCGT 59.182 55.000 21.20 5.96 0.00 4.83
4129 5522 0.817654 TGAGATCCACTGCAGTACCG 59.182 55.000 21.20 10.20 0.00 4.02
4130 5523 2.622436 GTTGAGATCCACTGCAGTACC 58.378 52.381 21.20 8.83 0.00 3.34
4131 5524 2.622436 GGTTGAGATCCACTGCAGTAC 58.378 52.381 21.20 11.32 0.00 2.73
4132 5525 1.555075 GGGTTGAGATCCACTGCAGTA 59.445 52.381 21.20 5.19 0.00 2.74
4133 5526 0.326264 GGGTTGAGATCCACTGCAGT 59.674 55.000 15.25 15.25 0.00 4.40
4134 5527 0.742281 CGGGTTGAGATCCACTGCAG 60.742 60.000 13.48 13.48 0.00 4.41
4135 5528 1.296392 CGGGTTGAGATCCACTGCA 59.704 57.895 0.00 0.00 0.00 4.41
4136 5529 2.109126 GCGGGTTGAGATCCACTGC 61.109 63.158 0.00 0.00 0.00 4.40
4137 5530 1.021390 GTGCGGGTTGAGATCCACTG 61.021 60.000 0.00 0.00 0.00 3.66
4138 5531 1.194781 AGTGCGGGTTGAGATCCACT 61.195 55.000 0.00 0.00 0.00 4.00
4139 5532 0.321653 AAGTGCGGGTTGAGATCCAC 60.322 55.000 0.00 0.00 0.00 4.02
4140 5533 0.321564 CAAGTGCGGGTTGAGATCCA 60.322 55.000 0.00 0.00 0.00 3.41
4141 5534 1.026718 CCAAGTGCGGGTTGAGATCC 61.027 60.000 0.00 0.00 0.00 3.36
4142 5535 0.036388 TCCAAGTGCGGGTTGAGATC 60.036 55.000 0.00 0.00 0.00 2.75
4143 5536 0.321653 GTCCAAGTGCGGGTTGAGAT 60.322 55.000 0.00 0.00 0.00 2.75
4144 5537 1.070786 GTCCAAGTGCGGGTTGAGA 59.929 57.895 0.00 0.00 0.00 3.27
4145 5538 1.966451 GGTCCAAGTGCGGGTTGAG 60.966 63.158 0.00 0.00 0.00 3.02
4146 5539 2.112297 GGTCCAAGTGCGGGTTGA 59.888 61.111 0.00 0.00 0.00 3.18
4147 5540 3.353836 CGGTCCAAGTGCGGGTTG 61.354 66.667 0.00 0.00 0.00 3.77
4148 5541 4.636435 CCGGTCCAAGTGCGGGTT 62.636 66.667 0.00 0.00 0.00 4.11
4154 5547 3.953775 ACCCAGCCGGTCCAAGTG 61.954 66.667 1.90 0.00 43.58 3.16
4155 5548 3.953775 CACCCAGCCGGTCCAAGT 61.954 66.667 1.90 0.00 43.58 3.16
4156 5549 4.722700 CCACCCAGCCGGTCCAAG 62.723 72.222 1.90 0.00 43.58 3.61
4160 5553 1.696097 ATATGTCCACCCAGCCGGTC 61.696 60.000 1.90 0.00 43.58 4.79
4162 5555 0.535102 GAATATGTCCACCCAGCCGG 60.535 60.000 0.00 0.00 37.81 6.13
4163 5556 0.180171 TGAATATGTCCACCCAGCCG 59.820 55.000 0.00 0.00 0.00 5.52
4164 5557 2.024414 GTTGAATATGTCCACCCAGCC 58.976 52.381 0.00 0.00 0.00 4.85
4165 5558 3.004752 AGTTGAATATGTCCACCCAGC 57.995 47.619 0.00 0.00 0.00 4.85
4166 5559 5.359194 AGTAGTTGAATATGTCCACCCAG 57.641 43.478 0.00 0.00 0.00 4.45
4167 5560 4.163458 GGAGTAGTTGAATATGTCCACCCA 59.837 45.833 0.00 0.00 0.00 4.51
4168 5561 4.444449 GGGAGTAGTTGAATATGTCCACCC 60.444 50.000 0.00 0.00 0.00 4.61
4169 5562 4.409247 AGGGAGTAGTTGAATATGTCCACC 59.591 45.833 0.00 0.00 0.00 4.61
4170 5563 5.453480 GGAGGGAGTAGTTGAATATGTCCAC 60.453 48.000 0.00 0.00 0.00 4.02
4171 5564 4.654262 GGAGGGAGTAGTTGAATATGTCCA 59.346 45.833 0.00 0.00 0.00 4.02
4172 5565 4.262079 CGGAGGGAGTAGTTGAATATGTCC 60.262 50.000 0.00 0.00 0.00 4.02
4173 5566 4.583489 TCGGAGGGAGTAGTTGAATATGTC 59.417 45.833 0.00 0.00 0.00 3.06
4174 5567 4.543689 TCGGAGGGAGTAGTTGAATATGT 58.456 43.478 0.00 0.00 0.00 2.29
4175 5568 5.730296 ATCGGAGGGAGTAGTTGAATATG 57.270 43.478 0.00 0.00 0.00 1.78
4176 5569 5.715753 GGTATCGGAGGGAGTAGTTGAATAT 59.284 44.000 0.00 0.00 0.00 1.28
4177 5570 5.075493 GGTATCGGAGGGAGTAGTTGAATA 58.925 45.833 0.00 0.00 0.00 1.75
4178 5571 3.896272 GGTATCGGAGGGAGTAGTTGAAT 59.104 47.826 0.00 0.00 0.00 2.57
4179 5572 3.294214 GGTATCGGAGGGAGTAGTTGAA 58.706 50.000 0.00 0.00 0.00 2.69
4180 5573 2.242965 TGGTATCGGAGGGAGTAGTTGA 59.757 50.000 0.00 0.00 0.00 3.18
4181 5574 2.662866 TGGTATCGGAGGGAGTAGTTG 58.337 52.381 0.00 0.00 0.00 3.16
4182 5575 3.393426 TTGGTATCGGAGGGAGTAGTT 57.607 47.619 0.00 0.00 0.00 2.24
4183 5576 3.393426 TTTGGTATCGGAGGGAGTAGT 57.607 47.619 0.00 0.00 0.00 2.73
4184 5577 4.957684 AATTTGGTATCGGAGGGAGTAG 57.042 45.455 0.00 0.00 0.00 2.57
4185 5578 5.461327 AGTAATTTGGTATCGGAGGGAGTA 58.539 41.667 0.00 0.00 0.00 2.59
4186 5579 4.296056 AGTAATTTGGTATCGGAGGGAGT 58.704 43.478 0.00 0.00 0.00 3.85
4187 5580 4.957684 AGTAATTTGGTATCGGAGGGAG 57.042 45.455 0.00 0.00 0.00 4.30
4188 5581 4.685030 GCAAGTAATTTGGTATCGGAGGGA 60.685 45.833 0.00 0.00 37.26 4.20
4189 5582 3.564225 GCAAGTAATTTGGTATCGGAGGG 59.436 47.826 0.00 0.00 37.26 4.30
4190 5583 3.564225 GGCAAGTAATTTGGTATCGGAGG 59.436 47.826 0.00 0.00 37.26 4.30
4191 5584 3.247648 CGGCAAGTAATTTGGTATCGGAG 59.752 47.826 0.00 0.00 37.26 4.63
4192 5585 3.199677 CGGCAAGTAATTTGGTATCGGA 58.800 45.455 0.00 0.00 37.26 4.55
4193 5586 2.286772 GCGGCAAGTAATTTGGTATCGG 60.287 50.000 0.00 0.00 37.26 4.18
4194 5587 2.353269 TGCGGCAAGTAATTTGGTATCG 59.647 45.455 0.00 0.00 37.26 2.92
4195 5588 3.625764 TCTGCGGCAAGTAATTTGGTATC 59.374 43.478 3.44 0.00 37.26 2.24
4196 5589 3.616219 TCTGCGGCAAGTAATTTGGTAT 58.384 40.909 3.44 0.00 37.26 2.73
4197 5590 3.060736 TCTGCGGCAAGTAATTTGGTA 57.939 42.857 3.44 0.00 37.26 3.25
4198 5591 1.904287 TCTGCGGCAAGTAATTTGGT 58.096 45.000 3.44 0.00 37.26 3.67
4199 5592 3.296322 TTTCTGCGGCAAGTAATTTGG 57.704 42.857 3.44 0.00 37.26 3.28
4291 5684 9.559958 CGACTGATACTTAGCAAAATTGAAATT 57.440 29.630 0.00 0.00 0.00 1.82
4292 5685 8.946085 TCGACTGATACTTAGCAAAATTGAAAT 58.054 29.630 0.00 0.00 0.00 2.17
4293 5686 8.227791 GTCGACTGATACTTAGCAAAATTGAAA 58.772 33.333 8.70 0.00 0.00 2.69
4294 5687 7.148474 GGTCGACTGATACTTAGCAAAATTGAA 60.148 37.037 16.46 0.00 0.00 2.69
4295 5688 6.312918 GGTCGACTGATACTTAGCAAAATTGA 59.687 38.462 16.46 0.00 0.00 2.57
4296 5689 6.478588 GGTCGACTGATACTTAGCAAAATTG 58.521 40.000 16.46 0.00 0.00 2.32
4297 5690 5.291128 CGGTCGACTGATACTTAGCAAAATT 59.709 40.000 20.01 0.00 0.00 1.82
4298 5691 4.804139 CGGTCGACTGATACTTAGCAAAAT 59.196 41.667 20.01 0.00 0.00 1.82
4299 5692 4.082625 TCGGTCGACTGATACTTAGCAAAA 60.083 41.667 23.11 0.00 0.00 2.44
4300 5693 3.441222 TCGGTCGACTGATACTTAGCAAA 59.559 43.478 23.11 0.00 0.00 3.68
4301 5694 3.011818 TCGGTCGACTGATACTTAGCAA 58.988 45.455 23.11 0.00 0.00 3.91
4302 5695 2.612672 CTCGGTCGACTGATACTTAGCA 59.387 50.000 26.62 2.03 0.00 3.49
4303 5696 2.871022 TCTCGGTCGACTGATACTTAGC 59.129 50.000 26.62 0.00 0.00 3.09
4304 5697 4.121317 AGTCTCGGTCGACTGATACTTAG 58.879 47.826 29.78 17.76 42.39 2.18
4305 5698 4.134379 AGTCTCGGTCGACTGATACTTA 57.866 45.455 29.78 12.51 42.39 2.24
4306 5699 2.988570 AGTCTCGGTCGACTGATACTT 58.011 47.619 29.78 18.59 42.39 2.24
4307 5700 2.678836 CAAGTCTCGGTCGACTGATACT 59.321 50.000 29.78 29.78 43.14 2.12
4308 5701 2.419324 ACAAGTCTCGGTCGACTGATAC 59.581 50.000 26.99 26.99 43.14 2.24
4309 5702 2.708051 ACAAGTCTCGGTCGACTGATA 58.292 47.619 26.62 17.46 43.14 2.15
4310 5703 1.535833 ACAAGTCTCGGTCGACTGAT 58.464 50.000 26.62 10.33 43.14 2.90
4311 5704 2.174363 TACAAGTCTCGGTCGACTGA 57.826 50.000 25.02 25.02 43.14 3.41
4312 5705 2.161808 ACATACAAGTCTCGGTCGACTG 59.838 50.000 18.66 18.66 43.14 3.51
4313 5706 2.419324 GACATACAAGTCTCGGTCGACT 59.581 50.000 16.46 0.00 45.73 4.18
4314 5707 2.419324 AGACATACAAGTCTCGGTCGAC 59.581 50.000 7.13 7.13 45.35 4.20
4315 5708 2.708051 AGACATACAAGTCTCGGTCGA 58.292 47.619 0.00 0.00 45.35 4.20
4323 5716 3.794028 GCATCGACTGAGACATACAAGTC 59.206 47.826 0.00 0.00 38.81 3.01
4324 5717 3.445450 AGCATCGACTGAGACATACAAGT 59.555 43.478 0.00 0.00 0.00 3.16
4325 5718 4.039151 AGCATCGACTGAGACATACAAG 57.961 45.455 0.00 0.00 0.00 3.16
4326 5719 5.774498 ATAGCATCGACTGAGACATACAA 57.226 39.130 0.00 0.00 0.00 2.41
4327 5720 7.454260 AATATAGCATCGACTGAGACATACA 57.546 36.000 0.00 0.00 0.00 2.29
4328 5721 6.684979 CGAATATAGCATCGACTGAGACATAC 59.315 42.308 0.00 0.00 41.43 2.39
4329 5722 6.371825 ACGAATATAGCATCGACTGAGACATA 59.628 38.462 11.05 0.00 41.43 2.29
4330 5723 5.182190 ACGAATATAGCATCGACTGAGACAT 59.818 40.000 11.05 0.00 41.43 3.06
4331 5724 4.515567 ACGAATATAGCATCGACTGAGACA 59.484 41.667 11.05 0.00 41.43 3.41
4332 5725 5.037015 ACGAATATAGCATCGACTGAGAC 57.963 43.478 11.05 0.00 41.43 3.36
4333 5726 5.690997 AACGAATATAGCATCGACTGAGA 57.309 39.130 11.05 0.00 41.43 3.27
4334 5727 5.117745 CCAAACGAATATAGCATCGACTGAG 59.882 44.000 11.05 0.00 41.43 3.35
4335 5728 4.982295 CCAAACGAATATAGCATCGACTGA 59.018 41.667 11.05 0.00 41.43 3.41
4336 5729 4.745125 ACCAAACGAATATAGCATCGACTG 59.255 41.667 11.05 7.80 41.43 3.51
4337 5730 4.945246 ACCAAACGAATATAGCATCGACT 58.055 39.130 11.05 0.00 41.43 4.18
4338 5731 4.982916 AGACCAAACGAATATAGCATCGAC 59.017 41.667 11.05 0.00 41.43 4.20
4339 5732 5.196341 AGACCAAACGAATATAGCATCGA 57.804 39.130 11.05 0.00 41.43 3.59
4340 5733 5.907197 AAGACCAAACGAATATAGCATCG 57.093 39.130 0.00 4.40 44.33 3.84
4341 5734 6.420008 ACGTAAGACCAAACGAATATAGCATC 59.580 38.462 1.45 0.00 41.55 3.91
4342 5735 6.200286 CACGTAAGACCAAACGAATATAGCAT 59.800 38.462 1.45 0.00 41.55 3.79
4343 5736 5.517411 CACGTAAGACCAAACGAATATAGCA 59.483 40.000 1.45 0.00 41.55 3.49
4344 5737 5.051240 CCACGTAAGACCAAACGAATATAGC 60.051 44.000 1.45 0.00 41.55 2.97
4345 5738 6.267817 TCCACGTAAGACCAAACGAATATAG 58.732 40.000 1.45 0.00 41.55 1.31
4346 5739 6.095300 TCTCCACGTAAGACCAAACGAATATA 59.905 38.462 1.45 0.00 41.55 0.86
4347 5740 5.075858 TCCACGTAAGACCAAACGAATAT 57.924 39.130 1.45 0.00 41.55 1.28
4348 5741 4.218200 TCTCCACGTAAGACCAAACGAATA 59.782 41.667 1.45 0.00 41.55 1.75
4349 5742 3.006110 TCTCCACGTAAGACCAAACGAAT 59.994 43.478 1.45 0.00 41.55 3.34
4350 5743 2.361757 TCTCCACGTAAGACCAAACGAA 59.638 45.455 1.45 0.00 41.55 3.85
4351 5744 1.955778 TCTCCACGTAAGACCAAACGA 59.044 47.619 1.45 0.00 41.55 3.85
4352 5745 2.427232 TCTCCACGTAAGACCAAACG 57.573 50.000 0.00 0.00 44.47 3.60
4353 5746 3.927142 CAGATCTCCACGTAAGACCAAAC 59.073 47.826 0.00 0.00 43.62 2.93
4354 5747 3.576982 ACAGATCTCCACGTAAGACCAAA 59.423 43.478 0.00 0.00 43.62 3.28
4355 5748 3.056821 CACAGATCTCCACGTAAGACCAA 60.057 47.826 0.00 0.00 43.62 3.67
4356 5749 2.492088 CACAGATCTCCACGTAAGACCA 59.508 50.000 0.00 0.00 43.62 4.02
4357 5750 2.735762 GCACAGATCTCCACGTAAGACC 60.736 54.545 0.00 0.00 43.62 3.85
4358 5751 2.094700 TGCACAGATCTCCACGTAAGAC 60.095 50.000 0.00 0.00 43.62 3.01
4359 5752 2.167662 TGCACAGATCTCCACGTAAGA 58.832 47.619 0.00 2.62 43.62 2.10
4361 5754 3.244078 ACTTTGCACAGATCTCCACGTAA 60.244 43.478 6.92 0.00 0.00 3.18
4362 5755 2.299013 ACTTTGCACAGATCTCCACGTA 59.701 45.455 6.92 0.00 0.00 3.57
4363 5756 1.070758 ACTTTGCACAGATCTCCACGT 59.929 47.619 6.92 0.00 0.00 4.49
4364 5757 1.800805 ACTTTGCACAGATCTCCACG 58.199 50.000 6.92 0.00 0.00 4.94
4365 5758 4.574599 AAAACTTTGCACAGATCTCCAC 57.425 40.909 6.92 0.00 0.00 4.02
4406 5799 9.890629 ACTTTGCACAGATCAGTATATAAGAAA 57.109 29.630 6.92 0.00 0.00 2.52
4407 5800 9.890629 AACTTTGCACAGATCAGTATATAAGAA 57.109 29.630 6.92 0.00 0.00 2.52
4408 5801 9.890629 AAACTTTGCACAGATCAGTATATAAGA 57.109 29.630 6.92 0.00 0.00 2.10
4411 5804 9.890629 AGAAAACTTTGCACAGATCAGTATATA 57.109 29.630 6.92 0.00 0.00 0.86
4412 5805 8.798859 AGAAAACTTTGCACAGATCAGTATAT 57.201 30.769 6.92 0.00 0.00 0.86
4413 5806 8.621532 AAGAAAACTTTGCACAGATCAGTATA 57.378 30.769 6.92 0.00 0.00 1.47
4414 5807 7.516198 AAGAAAACTTTGCACAGATCAGTAT 57.484 32.000 6.92 0.00 0.00 2.12
4415 5808 6.942532 AAGAAAACTTTGCACAGATCAGTA 57.057 33.333 6.92 0.00 0.00 2.74
4416 5809 5.841957 AAGAAAACTTTGCACAGATCAGT 57.158 34.783 6.92 0.00 0.00 3.41
4417 5810 7.529880 AAAAAGAAAACTTTGCACAGATCAG 57.470 32.000 6.92 0.00 0.00 2.90
4464 5857 9.436957 CCAAGTTTCAGTCAAGTAACATAGTAT 57.563 33.333 0.00 0.00 0.00 2.12
4465 5858 8.426489 ACCAAGTTTCAGTCAAGTAACATAGTA 58.574 33.333 0.00 0.00 0.00 1.82
4466 5859 7.280356 ACCAAGTTTCAGTCAAGTAACATAGT 58.720 34.615 0.00 0.00 0.00 2.12
4467 5860 7.730364 ACCAAGTTTCAGTCAAGTAACATAG 57.270 36.000 0.00 0.00 0.00 2.23
4468 5861 9.616156 TTAACCAAGTTTCAGTCAAGTAACATA 57.384 29.630 0.00 0.00 0.00 2.29
4469 5862 8.514330 TTAACCAAGTTTCAGTCAAGTAACAT 57.486 30.769 0.00 0.00 0.00 2.71
4470 5863 7.608761 ACTTAACCAAGTTTCAGTCAAGTAACA 59.391 33.333 0.00 0.00 42.51 2.41
4471 5864 7.982224 ACTTAACCAAGTTTCAGTCAAGTAAC 58.018 34.615 0.00 0.00 42.51 2.50
4472 5865 8.044908 AGACTTAACCAAGTTTCAGTCAAGTAA 58.955 33.333 16.02 0.00 45.18 2.24
4473 5866 7.562135 AGACTTAACCAAGTTTCAGTCAAGTA 58.438 34.615 16.02 0.00 45.18 2.24
4474 5867 6.415573 AGACTTAACCAAGTTTCAGTCAAGT 58.584 36.000 16.02 6.54 45.18 3.16
4475 5868 6.538742 TGAGACTTAACCAAGTTTCAGTCAAG 59.461 38.462 16.02 4.13 45.80 3.02
4476 5869 6.411376 TGAGACTTAACCAAGTTTCAGTCAA 58.589 36.000 16.02 6.57 45.80 3.18
4477 5870 5.984725 TGAGACTTAACCAAGTTTCAGTCA 58.015 37.500 16.02 0.00 45.80 3.41
4482 5875 6.591261 GTCGATTGAGACTTAACCAAGTTTC 58.409 40.000 0.00 2.11 45.18 2.78
4483 5876 6.541111 GTCGATTGAGACTTAACCAAGTTT 57.459 37.500 0.00 0.00 45.18 2.66
4497 5890 3.444034 TGGTTAGGTCTCAGTCGATTGAG 59.556 47.826 27.00 27.00 44.74 3.02
4498 5891 3.192844 GTGGTTAGGTCTCAGTCGATTGA 59.807 47.826 10.44 10.44 0.00 2.57
4499 5892 3.056821 TGTGGTTAGGTCTCAGTCGATTG 60.057 47.826 0.68 0.68 0.00 2.67
4500 5893 3.056749 GTGTGGTTAGGTCTCAGTCGATT 60.057 47.826 0.00 0.00 0.00 3.34
4501 5894 2.492484 GTGTGGTTAGGTCTCAGTCGAT 59.508 50.000 0.00 0.00 0.00 3.59
4502 5895 1.884579 GTGTGGTTAGGTCTCAGTCGA 59.115 52.381 0.00 0.00 0.00 4.20
4503 5896 1.067776 GGTGTGGTTAGGTCTCAGTCG 60.068 57.143 0.00 0.00 0.00 4.18
4504 5897 1.275573 GGGTGTGGTTAGGTCTCAGTC 59.724 57.143 0.00 0.00 0.00 3.51
4505 5898 1.349067 GGGTGTGGTTAGGTCTCAGT 58.651 55.000 0.00 0.00 0.00 3.41
4506 5899 1.348064 TGGGTGTGGTTAGGTCTCAG 58.652 55.000 0.00 0.00 0.00 3.35
4507 5900 2.038863 ATGGGTGTGGTTAGGTCTCA 57.961 50.000 0.00 0.00 0.00 3.27
4508 5901 4.563140 TTTATGGGTGTGGTTAGGTCTC 57.437 45.455 0.00 0.00 0.00 3.36
4509 5902 5.530176 ATTTTATGGGTGTGGTTAGGTCT 57.470 39.130 0.00 0.00 0.00 3.85
4510 5903 6.599356 AAATTTTATGGGTGTGGTTAGGTC 57.401 37.500 0.00 0.00 0.00 3.85
4511 5904 7.011382 TGTAAATTTTATGGGTGTGGTTAGGT 58.989 34.615 0.00 0.00 0.00 3.08
4512 5905 7.469537 TGTAAATTTTATGGGTGTGGTTAGG 57.530 36.000 0.00 0.00 0.00 2.69
4513 5906 9.936759 AATTGTAAATTTTATGGGTGTGGTTAG 57.063 29.630 0.00 0.00 0.00 2.34
4531 5924 9.938670 GCGGACAAACACATATATAATTGTAAA 57.061 29.630 1.15 0.00 31.68 2.01
4532 5925 9.110502 TGCGGACAAACACATATATAATTGTAA 57.889 29.630 1.15 0.00 31.68 2.41
4533 5926 8.552865 GTGCGGACAAACACATATATAATTGTA 58.447 33.333 0.63 0.00 36.77 2.41
4534 5927 7.282224 AGTGCGGACAAACACATATATAATTGT 59.718 33.333 10.52 0.00 39.30 2.71
4535 5928 7.639039 AGTGCGGACAAACACATATATAATTG 58.361 34.615 10.52 0.00 39.30 2.32
4536 5929 7.801716 AGTGCGGACAAACACATATATAATT 57.198 32.000 10.52 0.00 39.30 1.40
4537 5930 7.801716 AAGTGCGGACAAACACATATATAAT 57.198 32.000 10.52 0.00 39.30 1.28
4538 5931 7.618502 AAAGTGCGGACAAACACATATATAA 57.381 32.000 10.52 0.00 39.30 0.98
4539 5932 8.896320 ATAAAGTGCGGACAAACACATATATA 57.104 30.769 10.52 0.00 39.30 0.86
4540 5933 7.801716 ATAAAGTGCGGACAAACACATATAT 57.198 32.000 10.52 0.00 39.30 0.86
4541 5934 7.618502 AATAAAGTGCGGACAAACACATATA 57.381 32.000 10.52 0.00 39.30 0.86
4542 5935 6.509418 AATAAAGTGCGGACAAACACATAT 57.491 33.333 10.52 0.00 39.30 1.78
4543 5936 5.950758 AATAAAGTGCGGACAAACACATA 57.049 34.783 10.52 0.00 39.30 2.29
4544 5937 4.846779 AATAAAGTGCGGACAAACACAT 57.153 36.364 10.52 0.00 39.30 3.21
4545 5938 4.142359 ACAAATAAAGTGCGGACAAACACA 60.142 37.500 10.52 0.00 39.30 3.72
4546 5939 4.356289 ACAAATAAAGTGCGGACAAACAC 58.644 39.130 10.52 0.00 37.05 3.32
4547 5940 4.602995 GACAAATAAAGTGCGGACAAACA 58.397 39.130 10.52 0.00 0.00 2.83


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.