Multiple sequence alignment - TraesCS4D01G175800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G175800 chr4D 100.000 2477 0 0 1 2477 304694524 304697000 0.000000e+00 4575.0
1 TraesCS4D01G175800 chr6D 90.915 1508 84 24 485 1977 156256015 156254546 0.000000e+00 1977.0
2 TraesCS4D01G175800 chr6D 93.674 1154 70 2 826 1976 156260145 156261298 0.000000e+00 1724.0
3 TraesCS4D01G175800 chr6D 94.678 357 15 4 485 838 156259832 156260187 3.600000e-153 551.0
4 TraesCS4D01G175800 chr6D 96.988 166 4 1 673 837 156255799 156255634 6.750000e-71 278.0
5 TraesCS4D01G175800 chr1A 96.615 1152 37 2 826 1976 18494266 18493116 0.000000e+00 1910.0
6 TraesCS4D01G175800 chr1A 96.444 1153 39 2 826 1977 518794547 518793396 0.000000e+00 1901.0
7 TraesCS4D01G175800 chr1A 88.865 458 49 1 41 496 18497370 18496913 1.660000e-156 562.0
8 TraesCS4D01G175800 chr1A 95.170 352 14 3 489 838 518794855 518794505 1.000000e-153 553.0
9 TraesCS4D01G175800 chr1A 86.450 524 40 15 1 496 518797703 518797183 1.680000e-151 545.0
10 TraesCS4D01G175800 chr1A 93.820 356 19 3 485 838 18494578 18494224 1.300000e-147 532.0
11 TraesCS4D01G175800 chr1A 100.000 44 0 0 1 44 18497433 18497390 5.680000e-12 82.4
12 TraesCS4D01G175800 chr6A 96.534 1154 38 2 826 1978 607383237 607384389 0.000000e+00 1908.0
13 TraesCS4D01G175800 chr6A 87.140 521 39 11 1 493 607377508 607378028 1.290000e-157 566.0
14 TraesCS4D01G175800 chr6A 94.944 356 15 3 485 838 607382925 607383279 2.780000e-154 555.0
15 TraesCS4D01G175800 chr3A 96.014 1154 43 3 826 1978 416042978 416044129 0.000000e+00 1873.0
16 TraesCS4D01G175800 chr3A 95.225 356 13 4 485 838 416042667 416043020 5.980000e-156 560.0
17 TraesCS4D01G175800 chr3A 86.042 523 46 14 1 496 416039811 416040333 1.010000e-148 536.0
18 TraesCS4D01G175800 chr6B 94.705 1152 56 4 826 1973 100718038 100719188 0.000000e+00 1784.0
19 TraesCS4D01G175800 chr6B 94.618 1152 57 4 826 1973 100761063 100762213 0.000000e+00 1779.0
20 TraesCS4D01G175800 chr6B 94.085 355 19 2 485 838 100717727 100718080 2.800000e-149 538.0
21 TraesCS4D01G175800 chr6B 93.617 188 10 2 485 671 100752360 100752546 1.880000e-71 279.0
22 TraesCS4D01G175800 chr6B 100.000 39 0 0 3 41 100714856 100714894 3.420000e-09 73.1
23 TraesCS4D01G175800 chr6B 97.436 39 1 0 3 41 100749507 100749545 1.590000e-07 67.6
24 TraesCS4D01G175800 chr2D 87.184 1147 122 15 826 1964 579218444 579217315 0.000000e+00 1280.0
25 TraesCS4D01G175800 chr2D 78.903 237 44 4 2212 2447 476829983 476830214 3.300000e-34 156.0
26 TraesCS4D01G175800 chr3D 92.274 453 32 2 41 493 432075705 432076154 7.470000e-180 640.0
27 TraesCS4D01G175800 chr3D 94.944 356 15 3 485 838 432091056 432091410 2.780000e-154 555.0
28 TraesCS4D01G175800 chr3D 81.726 197 33 2 2015 2208 543807137 543807333 7.090000e-36 161.0
29 TraesCS4D01G175800 chr3D 100.000 58 0 0 3 60 432075644 432075701 9.370000e-20 108.0
30 TraesCS4D01G175800 chr4A 89.222 501 48 2 1979 2477 174153050 174152554 2.710000e-174 621.0
31 TraesCS4D01G175800 chr4B 88.608 158 16 1 1976 2131 380674935 380675092 9.040000e-45 191.0
32 TraesCS4D01G175800 chr2A 81.356 236 39 4 1982 2213 544283903 544284137 1.170000e-43 187.0
33 TraesCS4D01G175800 chr5B 82.710 214 32 5 1998 2207 51154381 51154593 4.210000e-43 185.0
34 TraesCS4D01G175800 chr2B 80.165 242 38 6 1979 2213 786520802 786520564 3.280000e-39 172.0
35 TraesCS4D01G175800 chr2B 79.916 239 42 4 1979 2214 786763442 786763207 1.180000e-38 171.0
36 TraesCS4D01G175800 chr2B 79.412 238 43 4 1980 2214 786571880 786571646 1.970000e-36 163.0
37 TraesCS4D01G175800 chr1D 80.342 234 35 8 1982 2208 494347738 494347967 1.520000e-37 167.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G175800 chr4D 304694524 304697000 2476 False 4575.000000 4575 100.000000 1 2477 1 chr4D.!!$F1 2476
1 TraesCS4D01G175800 chr6D 156259832 156261298 1466 False 1137.500000 1724 94.176000 485 1976 2 chr6D.!!$F1 1491
2 TraesCS4D01G175800 chr6D 156254546 156256015 1469 True 1127.500000 1977 93.951500 485 1977 2 chr6D.!!$R1 1492
3 TraesCS4D01G175800 chr1A 518793396 518797703 4307 True 999.666667 1901 92.688000 1 1977 3 chr1A.!!$R2 1976
4 TraesCS4D01G175800 chr1A 18493116 18497433 4317 True 771.600000 1910 94.825000 1 1976 4 chr1A.!!$R1 1975
5 TraesCS4D01G175800 chr6A 607382925 607384389 1464 False 1231.500000 1908 95.739000 485 1978 2 chr6A.!!$F2 1493
6 TraesCS4D01G175800 chr6A 607377508 607378028 520 False 566.000000 566 87.140000 1 493 1 chr6A.!!$F1 492
7 TraesCS4D01G175800 chr3A 416039811 416044129 4318 False 989.666667 1873 92.427000 1 1978 3 chr3A.!!$F1 1977
8 TraesCS4D01G175800 chr6B 100761063 100762213 1150 False 1779.000000 1779 94.618000 826 1973 1 chr6B.!!$F1 1147
9 TraesCS4D01G175800 chr6B 100714856 100719188 4332 False 798.366667 1784 96.263333 3 1973 3 chr6B.!!$F2 1970
10 TraesCS4D01G175800 chr2D 579217315 579218444 1129 True 1280.000000 1280 87.184000 826 1964 1 chr2D.!!$R1 1138
11 TraesCS4D01G175800 chr3D 432075644 432076154 510 False 374.000000 640 96.137000 3 493 2 chr3D.!!$F3 490

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
457 563 1.003959 TTGCGTACATGAGCTGCCA 60.004 52.632 0.0 0.0 0.0 4.92 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2132 4668 0.036164 ATACCGCAACACAGGCTTCA 59.964 50.0 0.0 0.0 0.0 3.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
115 189 2.745100 CTCGTCTCCCGTCGGTGA 60.745 66.667 11.06 5.32 37.94 4.02
159 233 2.278857 CGGCGGATCTCAAGGTCG 60.279 66.667 0.00 0.00 0.00 4.79
168 242 3.531538 GATCTCAAGGTCGGTGCATTAA 58.468 45.455 0.00 0.00 0.00 1.40
195 269 6.153851 GCTATCTTCTTCCTATCCTTAGTCCC 59.846 46.154 0.00 0.00 0.00 4.46
203 277 1.047034 ATCCTTAGTCCCCCGTTCGG 61.047 60.000 4.08 4.08 0.00 4.30
338 417 1.442148 GTGGCACGGGAGGTAGATC 59.558 63.158 0.00 0.00 0.00 2.75
350 429 4.853142 TAGATCCAGGGGCGGCGT 62.853 66.667 9.37 0.00 0.00 5.68
425 531 3.285484 CAGATGTAGGAAGCTGGCAAAT 58.715 45.455 0.00 0.00 0.00 2.32
457 563 1.003959 TTGCGTACATGAGCTGCCA 60.004 52.632 0.00 0.00 0.00 4.92
472 578 1.453015 GCCAGTGGTGGTGTGAACA 60.453 57.895 11.74 0.00 46.96 3.18
474 580 1.544537 GCCAGTGGTGGTGTGAACATA 60.545 52.381 11.74 0.00 46.96 2.29
590 3086 9.612066 ATTTGTCCAAAATACTTGTTGAAATGT 57.388 25.926 0.00 0.00 33.56 2.71
704 3231 8.803235 GGAACTTTTTATACTCCATTTCCTTGT 58.197 33.333 0.00 0.00 0.00 3.16
736 3263 8.107095 TGAGTACTTTTATAGCCCAATTCTTGT 58.893 33.333 0.00 0.00 0.00 3.16
795 3323 7.787904 TGGACCTTATGTATACTCCATGTTAGT 59.212 37.037 4.17 3.70 0.00 2.24
796 3324 8.648693 GGACCTTATGTATACTCCATGTTAGTT 58.351 37.037 4.17 0.00 0.00 2.24
797 3325 9.477484 GACCTTATGTATACTCCATGTTAGTTG 57.523 37.037 4.17 0.00 0.00 3.16
798 3326 7.931948 ACCTTATGTATACTCCATGTTAGTTGC 59.068 37.037 4.17 0.00 0.00 4.17
799 3327 8.150945 CCTTATGTATACTCCATGTTAGTTGCT 58.849 37.037 4.17 0.00 0.00 3.91
800 3328 8.887036 TTATGTATACTCCATGTTAGTTGCTG 57.113 34.615 4.17 0.00 0.00 4.41
801 3329 6.538945 TGTATACTCCATGTTAGTTGCTGA 57.461 37.500 4.17 0.00 0.00 4.26
802 3330 6.941857 TGTATACTCCATGTTAGTTGCTGAA 58.058 36.000 4.17 0.00 0.00 3.02
803 3331 7.390823 TGTATACTCCATGTTAGTTGCTGAAA 58.609 34.615 4.17 0.00 0.00 2.69
804 3332 8.046708 TGTATACTCCATGTTAGTTGCTGAAAT 58.953 33.333 4.17 0.00 0.00 2.17
805 3333 5.633830 ACTCCATGTTAGTTGCTGAAATG 57.366 39.130 0.00 0.00 0.00 2.32
806 3334 5.316167 ACTCCATGTTAGTTGCTGAAATGA 58.684 37.500 0.00 0.00 0.00 2.57
807 3335 5.413833 ACTCCATGTTAGTTGCTGAAATGAG 59.586 40.000 0.00 0.00 0.00 2.90
808 3336 4.156556 TCCATGTTAGTTGCTGAAATGAGC 59.843 41.667 0.00 0.00 39.62 4.26
809 3337 4.157289 CCATGTTAGTTGCTGAAATGAGCT 59.843 41.667 0.00 0.00 39.90 4.09
810 3338 5.336213 CCATGTTAGTTGCTGAAATGAGCTT 60.336 40.000 0.00 0.00 39.90 3.74
811 3339 5.772825 TGTTAGTTGCTGAAATGAGCTTT 57.227 34.783 0.00 0.00 39.90 3.51
812 3340 6.147864 TGTTAGTTGCTGAAATGAGCTTTT 57.852 33.333 0.00 0.00 39.90 2.27
813 3341 7.270757 TGTTAGTTGCTGAAATGAGCTTTTA 57.729 32.000 0.00 0.00 39.90 1.52
814 3342 7.885297 TGTTAGTTGCTGAAATGAGCTTTTAT 58.115 30.769 0.00 0.00 39.90 1.40
815 3343 9.008965 TGTTAGTTGCTGAAATGAGCTTTTATA 57.991 29.630 0.00 0.00 39.90 0.98
816 3344 9.495754 GTTAGTTGCTGAAATGAGCTTTTATAG 57.504 33.333 0.00 0.00 39.90 1.31
1021 3551 1.065491 TGCTGGTTATCGTTGGAGCAT 60.065 47.619 0.00 0.00 31.66 3.79
1145 3675 1.076024 AGAGGTTGCCCAATCACACAT 59.924 47.619 0.00 0.00 0.00 3.21
1221 3751 4.521146 CAGAAGATAGGATGGTTGCAACT 58.479 43.478 27.64 10.40 0.00 3.16
1338 3868 0.038166 TCCCTGGCTTTGATGTGGAC 59.962 55.000 0.00 0.00 0.00 4.02
1342 3872 0.321564 TGGCTTTGATGTGGACTCCG 60.322 55.000 0.00 0.00 0.00 4.63
1401 3931 2.425312 TGTTGCAACGACATTCAAGGTT 59.575 40.909 23.79 0.00 0.00 3.50
1539 4071 3.886123 ACAATGGAGCTATGGGTTGTAC 58.114 45.455 0.00 0.00 0.00 2.90
1645 4177 5.986135 GGAATGTCGAACTATGTGCTCTATT 59.014 40.000 0.00 0.00 0.00 1.73
1751 4283 5.338632 TGGGTATGACTCCTTCTTTCTACA 58.661 41.667 0.00 0.00 0.00 2.74
1800 4334 5.302823 GCCTCATATTGAAAAATGGGCTAGT 59.697 40.000 12.09 0.00 36.91 2.57
1905 4440 6.531503 TCCACACAACCAAACAGAAAAATA 57.468 33.333 0.00 0.00 0.00 1.40
1906 4441 7.118496 TCCACACAACCAAACAGAAAAATAT 57.882 32.000 0.00 0.00 0.00 1.28
1978 4514 5.036916 TCCCTCTAACCAAACACATCCTAT 58.963 41.667 0.00 0.00 0.00 2.57
1979 4515 5.104527 TCCCTCTAACCAAACACATCCTATG 60.105 44.000 0.00 0.00 0.00 2.23
1980 4516 5.339200 CCCTCTAACCAAACACATCCTATGT 60.339 44.000 0.00 0.00 46.22 2.29
1981 4517 6.180472 CCTCTAACCAAACACATCCTATGTT 58.820 40.000 0.00 0.00 42.70 2.71
1982 4518 6.094048 CCTCTAACCAAACACATCCTATGTTG 59.906 42.308 0.00 0.00 42.70 3.33
1983 4519 4.519540 AACCAAACACATCCTATGTTGC 57.480 40.909 0.00 0.00 42.70 4.17
1984 4520 2.825532 ACCAAACACATCCTATGTTGCC 59.174 45.455 0.00 0.00 42.70 4.52
1985 4521 2.166254 CCAAACACATCCTATGTTGCCC 59.834 50.000 0.00 0.00 42.70 5.36
1986 4522 2.824936 CAAACACATCCTATGTTGCCCA 59.175 45.455 0.00 0.00 42.70 5.36
1987 4523 3.386932 AACACATCCTATGTTGCCCAT 57.613 42.857 0.00 0.00 42.70 4.00
1988 4524 2.936202 ACACATCCTATGTTGCCCATC 58.064 47.619 0.00 0.00 42.70 3.51
1989 4525 2.233271 CACATCCTATGTTGCCCATCC 58.767 52.381 0.00 0.00 42.70 3.51
1990 4526 2.138542 ACATCCTATGTTGCCCATCCT 58.861 47.619 0.00 0.00 41.63 3.24
1991 4527 2.107204 ACATCCTATGTTGCCCATCCTC 59.893 50.000 0.00 0.00 41.63 3.71
1992 4528 2.196742 TCCTATGTTGCCCATCCTCT 57.803 50.000 0.00 0.00 34.86 3.69
1993 4529 2.492025 TCCTATGTTGCCCATCCTCTT 58.508 47.619 0.00 0.00 34.86 2.85
1994 4530 3.664320 TCCTATGTTGCCCATCCTCTTA 58.336 45.455 0.00 0.00 34.86 2.10
1995 4531 3.648067 TCCTATGTTGCCCATCCTCTTAG 59.352 47.826 0.00 0.00 34.86 2.18
1996 4532 3.648067 CCTATGTTGCCCATCCTCTTAGA 59.352 47.826 0.00 0.00 34.86 2.10
1997 4533 3.567478 ATGTTGCCCATCCTCTTAGAC 57.433 47.619 0.00 0.00 0.00 2.59
1998 4534 1.207089 TGTTGCCCATCCTCTTAGACG 59.793 52.381 0.00 0.00 0.00 4.18
1999 4535 1.480954 GTTGCCCATCCTCTTAGACGA 59.519 52.381 0.00 0.00 0.00 4.20
2000 4536 2.088104 TGCCCATCCTCTTAGACGAT 57.912 50.000 0.00 0.00 0.00 3.73
2001 4537 3.238788 TGCCCATCCTCTTAGACGATA 57.761 47.619 0.00 0.00 0.00 2.92
2002 4538 2.891580 TGCCCATCCTCTTAGACGATAC 59.108 50.000 0.00 0.00 0.00 2.24
2003 4539 3.158676 GCCCATCCTCTTAGACGATACT 58.841 50.000 0.00 0.00 0.00 2.12
2004 4540 3.191791 GCCCATCCTCTTAGACGATACTC 59.808 52.174 0.00 0.00 0.00 2.59
2005 4541 4.658063 CCCATCCTCTTAGACGATACTCT 58.342 47.826 0.00 0.00 0.00 3.24
2006 4542 5.074115 CCCATCCTCTTAGACGATACTCTT 58.926 45.833 0.00 0.00 0.00 2.85
2007 4543 5.536916 CCCATCCTCTTAGACGATACTCTTT 59.463 44.000 0.00 0.00 0.00 2.52
2008 4544 6.041069 CCCATCCTCTTAGACGATACTCTTTT 59.959 42.308 0.00 0.00 0.00 2.27
2009 4545 7.142680 CCATCCTCTTAGACGATACTCTTTTC 58.857 42.308 0.00 0.00 0.00 2.29
2010 4546 7.201830 CCATCCTCTTAGACGATACTCTTTTCA 60.202 40.741 0.00 0.00 0.00 2.69
2011 4547 7.323049 TCCTCTTAGACGATACTCTTTTCAG 57.677 40.000 0.00 0.00 0.00 3.02
2012 4548 6.319152 TCCTCTTAGACGATACTCTTTTCAGG 59.681 42.308 0.00 0.00 0.00 3.86
2013 4549 6.095720 CCTCTTAGACGATACTCTTTTCAGGT 59.904 42.308 0.00 0.00 0.00 4.00
2014 4550 7.363094 CCTCTTAGACGATACTCTTTTCAGGTT 60.363 40.741 0.00 0.00 0.00 3.50
2015 4551 7.313646 TCTTAGACGATACTCTTTTCAGGTTG 58.686 38.462 0.00 0.00 0.00 3.77
2016 4552 4.822026 AGACGATACTCTTTTCAGGTTGG 58.178 43.478 0.00 0.00 0.00 3.77
2017 4553 3.335579 ACGATACTCTTTTCAGGTTGGC 58.664 45.455 0.00 0.00 0.00 4.52
2018 4554 2.678336 CGATACTCTTTTCAGGTTGGCC 59.322 50.000 0.00 0.00 0.00 5.36
2020 4556 4.382685 CGATACTCTTTTCAGGTTGGCCTA 60.383 45.833 3.32 0.00 44.97 3.93
2021 4557 5.685075 CGATACTCTTTTCAGGTTGGCCTAT 60.685 44.000 3.32 0.00 44.97 2.57
2022 4558 3.690460 ACTCTTTTCAGGTTGGCCTATG 58.310 45.455 3.32 0.00 44.97 2.23
2023 4559 3.019564 CTCTTTTCAGGTTGGCCTATGG 58.980 50.000 3.32 0.00 44.97 2.74
2024 4560 2.378547 TCTTTTCAGGTTGGCCTATGGT 59.621 45.455 3.32 0.00 44.97 3.55
2025 4561 2.507407 TTTCAGGTTGGCCTATGGTC 57.493 50.000 3.32 0.00 44.97 4.02
2026 4562 1.367346 TTCAGGTTGGCCTATGGTCA 58.633 50.000 3.32 0.00 44.97 4.02
2027 4563 1.595311 TCAGGTTGGCCTATGGTCAT 58.405 50.000 3.32 0.00 44.97 3.06
2028 4564 1.490490 TCAGGTTGGCCTATGGTCATC 59.510 52.381 3.32 0.00 44.97 2.92
2029 4565 1.492176 CAGGTTGGCCTATGGTCATCT 59.508 52.381 3.32 0.00 44.97 2.90
2030 4566 2.705658 CAGGTTGGCCTATGGTCATCTA 59.294 50.000 3.32 0.00 44.97 1.98
2031 4567 2.975489 AGGTTGGCCTATGGTCATCTAG 59.025 50.000 3.32 0.00 44.90 2.43
2032 4568 2.551071 GGTTGGCCTATGGTCATCTAGC 60.551 54.545 3.32 0.00 37.08 3.42
2033 4569 2.370189 GTTGGCCTATGGTCATCTAGCT 59.630 50.000 3.32 0.00 37.08 3.32
2034 4570 1.973515 TGGCCTATGGTCATCTAGCTG 59.026 52.381 3.32 0.00 29.54 4.24
2035 4571 1.338579 GGCCTATGGTCATCTAGCTGC 60.339 57.143 0.00 0.00 0.00 5.25
2036 4572 1.622811 GCCTATGGTCATCTAGCTGCT 59.377 52.381 7.57 7.57 0.00 4.24
2037 4573 2.612471 GCCTATGGTCATCTAGCTGCTG 60.612 54.545 13.43 2.51 0.00 4.41
2038 4574 2.896044 CCTATGGTCATCTAGCTGCTGA 59.104 50.000 13.43 8.28 0.00 4.26
2039 4575 3.056678 CCTATGGTCATCTAGCTGCTGAG 60.057 52.174 13.43 6.14 0.00 3.35
2040 4576 2.149973 TGGTCATCTAGCTGCTGAGA 57.850 50.000 13.43 11.29 0.00 3.27
2041 4577 2.675583 TGGTCATCTAGCTGCTGAGAT 58.324 47.619 13.43 12.98 32.48 2.75
2042 4578 3.036819 TGGTCATCTAGCTGCTGAGATT 58.963 45.455 13.43 0.30 29.73 2.40
2043 4579 4.218312 TGGTCATCTAGCTGCTGAGATTA 58.782 43.478 13.43 5.80 29.73 1.75
2044 4580 4.651045 TGGTCATCTAGCTGCTGAGATTAA 59.349 41.667 13.43 5.05 29.73 1.40
2045 4581 5.129320 TGGTCATCTAGCTGCTGAGATTAAA 59.871 40.000 13.43 2.96 29.73 1.52
2046 4582 6.183361 TGGTCATCTAGCTGCTGAGATTAAAT 60.183 38.462 13.43 0.00 29.73 1.40
2047 4583 6.368516 GGTCATCTAGCTGCTGAGATTAAATC 59.631 42.308 13.43 2.60 29.73 2.17
2048 4584 7.153985 GTCATCTAGCTGCTGAGATTAAATCT 58.846 38.462 13.43 0.00 43.70 2.40
2060 4596 6.610741 GAGATTAAATCTCGCATGGAAGTT 57.389 37.500 0.00 0.00 45.50 2.66
2061 4597 7.715265 GAGATTAAATCTCGCATGGAAGTTA 57.285 36.000 0.00 0.00 45.50 2.24
2062 4598 7.721286 AGATTAAATCTCGCATGGAAGTTAG 57.279 36.000 0.00 0.00 33.42 2.34
2063 4599 7.500992 AGATTAAATCTCGCATGGAAGTTAGA 58.499 34.615 0.00 0.00 33.42 2.10
2064 4600 7.655328 AGATTAAATCTCGCATGGAAGTTAGAG 59.345 37.037 0.00 0.00 33.42 2.43
2065 4601 4.744795 AATCTCGCATGGAAGTTAGAGT 57.255 40.909 0.00 0.00 0.00 3.24
2066 4602 4.744795 ATCTCGCATGGAAGTTAGAGTT 57.255 40.909 0.00 0.00 0.00 3.01
2067 4603 4.537135 TCTCGCATGGAAGTTAGAGTTT 57.463 40.909 0.00 0.00 0.00 2.66
2068 4604 4.245660 TCTCGCATGGAAGTTAGAGTTTG 58.754 43.478 0.00 0.00 0.00 2.93
2069 4605 3.997021 CTCGCATGGAAGTTAGAGTTTGT 59.003 43.478 0.00 0.00 0.00 2.83
2070 4606 4.385825 TCGCATGGAAGTTAGAGTTTGTT 58.614 39.130 0.00 0.00 0.00 2.83
2071 4607 4.451096 TCGCATGGAAGTTAGAGTTTGTTC 59.549 41.667 0.00 0.00 0.00 3.18
2072 4608 4.378459 CGCATGGAAGTTAGAGTTTGTTCC 60.378 45.833 0.00 0.00 37.73 3.62
2073 4609 4.762251 GCATGGAAGTTAGAGTTTGTTCCT 59.238 41.667 0.00 0.00 38.02 3.36
2074 4610 5.106515 GCATGGAAGTTAGAGTTTGTTCCTC 60.107 44.000 0.00 0.00 38.02 3.71
2075 4611 4.628074 TGGAAGTTAGAGTTTGTTCCTCG 58.372 43.478 0.00 0.00 38.02 4.63
2076 4612 3.995048 GGAAGTTAGAGTTTGTTCCTCGG 59.005 47.826 0.00 0.00 34.89 4.63
2077 4613 4.262335 GGAAGTTAGAGTTTGTTCCTCGGA 60.262 45.833 0.00 0.00 34.89 4.55
2078 4614 4.950205 AGTTAGAGTTTGTTCCTCGGAA 57.050 40.909 0.00 0.00 34.08 4.30
2079 4615 5.286267 AGTTAGAGTTTGTTCCTCGGAAA 57.714 39.130 0.00 0.00 35.75 3.13
2080 4616 5.298347 AGTTAGAGTTTGTTCCTCGGAAAG 58.702 41.667 0.00 0.00 35.75 2.62
2081 4617 3.840124 AGAGTTTGTTCCTCGGAAAGT 57.160 42.857 0.00 0.00 35.75 2.66
2082 4618 4.152284 AGAGTTTGTTCCTCGGAAAGTT 57.848 40.909 0.00 0.00 35.75 2.66
2083 4619 5.286267 AGAGTTTGTTCCTCGGAAAGTTA 57.714 39.130 0.00 0.00 35.75 2.24
2084 4620 5.298347 AGAGTTTGTTCCTCGGAAAGTTAG 58.702 41.667 0.00 0.00 35.75 2.34
2085 4621 5.032327 AGTTTGTTCCTCGGAAAGTTAGT 57.968 39.130 0.00 0.00 35.75 2.24
2086 4622 6.041296 AGAGTTTGTTCCTCGGAAAGTTAGTA 59.959 38.462 0.00 0.00 35.75 1.82
2087 4623 6.221659 AGTTTGTTCCTCGGAAAGTTAGTAG 58.778 40.000 0.00 0.00 35.75 2.57
2088 4624 6.041296 AGTTTGTTCCTCGGAAAGTTAGTAGA 59.959 38.462 0.00 0.00 35.75 2.59
2089 4625 6.600882 TTGTTCCTCGGAAAGTTAGTAGAT 57.399 37.500 0.00 0.00 35.75 1.98
2090 4626 7.707624 TTGTTCCTCGGAAAGTTAGTAGATA 57.292 36.000 0.00 0.00 35.75 1.98
2091 4627 7.893124 TGTTCCTCGGAAAGTTAGTAGATAT 57.107 36.000 0.00 0.00 35.75 1.63
2092 4628 7.938715 TGTTCCTCGGAAAGTTAGTAGATATC 58.061 38.462 0.00 0.00 35.75 1.63
2093 4629 7.558807 TGTTCCTCGGAAAGTTAGTAGATATCA 59.441 37.037 5.32 0.00 35.75 2.15
2094 4630 8.411683 GTTCCTCGGAAAGTTAGTAGATATCAA 58.588 37.037 5.32 0.00 35.75 2.57
2095 4631 8.529424 TCCTCGGAAAGTTAGTAGATATCAAA 57.471 34.615 5.32 0.00 0.00 2.69
2096 4632 8.974238 TCCTCGGAAAGTTAGTAGATATCAAAA 58.026 33.333 5.32 0.00 0.00 2.44
2097 4633 9.765795 CCTCGGAAAGTTAGTAGATATCAAAAT 57.234 33.333 5.32 0.00 0.00 1.82
2110 4646 9.929180 GTAGATATCAAAATAGGTAGCACATCA 57.071 33.333 5.32 0.00 0.00 3.07
2115 4651 7.099266 TCAAAATAGGTAGCACATCAATTGG 57.901 36.000 5.42 0.00 0.00 3.16
2116 4652 5.520376 AAATAGGTAGCACATCAATTGGC 57.480 39.130 5.42 0.64 0.00 4.52
2117 4653 2.512692 AGGTAGCACATCAATTGGCA 57.487 45.000 5.42 0.00 0.00 4.92
2118 4654 2.806434 AGGTAGCACATCAATTGGCAA 58.194 42.857 0.68 0.68 0.00 4.52
2119 4655 3.164268 AGGTAGCACATCAATTGGCAAA 58.836 40.909 3.01 0.00 0.00 3.68
2120 4656 3.056607 AGGTAGCACATCAATTGGCAAAC 60.057 43.478 3.01 3.94 0.00 2.93
2121 4657 3.056607 GGTAGCACATCAATTGGCAAACT 60.057 43.478 3.01 1.37 0.00 2.66
2122 4658 4.157656 GGTAGCACATCAATTGGCAAACTA 59.842 41.667 3.01 0.43 0.00 2.24
2123 4659 4.178545 AGCACATCAATTGGCAAACTAC 57.821 40.909 3.01 0.00 0.00 2.73
2124 4660 3.573538 AGCACATCAATTGGCAAACTACA 59.426 39.130 3.01 0.00 0.00 2.74
2125 4661 3.922240 GCACATCAATTGGCAAACTACAG 59.078 43.478 3.01 0.00 0.00 2.74
2126 4662 3.922240 CACATCAATTGGCAAACTACAGC 59.078 43.478 3.01 0.00 0.00 4.40
2132 4668 3.527434 GGCAAACTACAGCCGTACT 57.473 52.632 0.00 0.00 41.70 2.73
2141 4677 3.793060 AGCCGTACTGAAGCCTGT 58.207 55.556 0.00 0.00 0.00 4.00
2142 4678 1.293498 AGCCGTACTGAAGCCTGTG 59.707 57.895 0.00 0.00 0.00 3.66
2143 4679 1.004918 GCCGTACTGAAGCCTGTGT 60.005 57.895 0.00 0.00 0.00 3.72
2144 4680 0.602905 GCCGTACTGAAGCCTGTGTT 60.603 55.000 0.00 0.00 0.00 3.32
2145 4681 1.148310 CCGTACTGAAGCCTGTGTTG 58.852 55.000 0.00 0.00 0.00 3.33
2146 4682 0.512952 CGTACTGAAGCCTGTGTTGC 59.487 55.000 0.00 0.00 0.00 4.17
2147 4683 0.512952 GTACTGAAGCCTGTGTTGCG 59.487 55.000 0.00 0.00 0.00 4.85
2148 4684 0.602638 TACTGAAGCCTGTGTTGCGG 60.603 55.000 0.00 0.00 0.00 5.69
2149 4685 1.893808 CTGAAGCCTGTGTTGCGGT 60.894 57.895 0.00 0.00 0.00 5.68
2150 4686 0.602638 CTGAAGCCTGTGTTGCGGTA 60.603 55.000 0.00 0.00 0.00 4.02
2151 4687 0.036164 TGAAGCCTGTGTTGCGGTAT 59.964 50.000 0.00 0.00 0.00 2.73
2152 4688 0.447801 GAAGCCTGTGTTGCGGTATG 59.552 55.000 0.00 0.00 0.00 2.39
2153 4689 0.960364 AAGCCTGTGTTGCGGTATGG 60.960 55.000 0.00 0.00 0.00 2.74
2154 4690 1.376683 GCCTGTGTTGCGGTATGGA 60.377 57.895 0.00 0.00 0.00 3.41
2155 4691 1.644786 GCCTGTGTTGCGGTATGGAC 61.645 60.000 0.00 0.00 0.00 4.02
2156 4692 1.358725 CCTGTGTTGCGGTATGGACG 61.359 60.000 0.00 0.00 0.00 4.79
2164 4700 2.605094 CGGTATGGACGCATTCAGG 58.395 57.895 0.00 0.00 0.00 3.86
2165 4701 0.179084 CGGTATGGACGCATTCAGGT 60.179 55.000 0.00 0.00 0.00 4.00
2166 4702 1.583054 GGTATGGACGCATTCAGGTC 58.417 55.000 0.00 0.00 0.00 3.85
2167 4703 1.134521 GGTATGGACGCATTCAGGTCA 60.135 52.381 0.00 0.00 34.87 4.02
2168 4704 2.485479 GGTATGGACGCATTCAGGTCAT 60.485 50.000 0.00 0.00 34.87 3.06
2169 4705 1.959042 ATGGACGCATTCAGGTCATC 58.041 50.000 0.00 0.00 34.87 2.92
2170 4706 0.107703 TGGACGCATTCAGGTCATCC 60.108 55.000 0.00 0.00 34.87 3.51
2171 4707 0.179000 GGACGCATTCAGGTCATCCT 59.821 55.000 0.00 0.00 46.37 3.24
2172 4708 1.407437 GGACGCATTCAGGTCATCCTT 60.407 52.381 0.00 0.00 43.07 3.36
2173 4709 2.359900 GACGCATTCAGGTCATCCTTT 58.640 47.619 0.00 0.00 43.07 3.11
2174 4710 2.749621 GACGCATTCAGGTCATCCTTTT 59.250 45.455 0.00 0.00 43.07 2.27
2175 4711 3.157087 ACGCATTCAGGTCATCCTTTTT 58.843 40.909 0.00 0.00 43.07 1.94
2176 4712 3.057315 ACGCATTCAGGTCATCCTTTTTG 60.057 43.478 0.00 0.00 43.07 2.44
2177 4713 3.057315 CGCATTCAGGTCATCCTTTTTGT 60.057 43.478 0.00 0.00 43.07 2.83
2178 4714 4.240096 GCATTCAGGTCATCCTTTTTGTG 58.760 43.478 0.00 0.00 43.07 3.33
2179 4715 4.022068 GCATTCAGGTCATCCTTTTTGTGA 60.022 41.667 0.00 0.00 43.07 3.58
2180 4716 5.706916 CATTCAGGTCATCCTTTTTGTGAG 58.293 41.667 0.00 0.00 43.07 3.51
2181 4717 3.754965 TCAGGTCATCCTTTTTGTGAGG 58.245 45.455 0.00 0.00 43.07 3.86
2182 4718 2.229784 CAGGTCATCCTTTTTGTGAGGC 59.770 50.000 0.00 0.00 43.07 4.70
2183 4719 2.158475 AGGTCATCCTTTTTGTGAGGCA 60.158 45.455 0.00 0.00 42.12 4.75
2184 4720 2.029918 GGTCATCCTTTTTGTGAGGCAC 60.030 50.000 0.00 0.00 34.17 5.01
2185 4721 6.525950 AGGTCATCCTTTTTGTGAGGCACT 62.526 45.833 0.00 0.00 42.12 4.40
2197 4733 3.348151 AGGCACTCTTGTCTCGAGA 57.652 52.632 12.08 12.08 28.58 4.04
2198 4734 1.846007 AGGCACTCTTGTCTCGAGAT 58.154 50.000 19.90 0.00 28.58 2.75
2199 4735 2.175202 AGGCACTCTTGTCTCGAGATT 58.825 47.619 19.90 0.00 28.58 2.40
2200 4736 2.165437 AGGCACTCTTGTCTCGAGATTC 59.835 50.000 19.90 7.29 28.58 2.52
2201 4737 2.165437 GGCACTCTTGTCTCGAGATTCT 59.835 50.000 19.90 0.00 32.87 2.40
2202 4738 3.378742 GGCACTCTTGTCTCGAGATTCTA 59.621 47.826 19.90 2.68 32.87 2.10
2203 4739 4.142359 GGCACTCTTGTCTCGAGATTCTAA 60.142 45.833 19.90 10.68 32.87 2.10
2204 4740 4.796312 GCACTCTTGTCTCGAGATTCTAAC 59.204 45.833 19.90 5.53 32.87 2.34
2205 4741 5.336744 CACTCTTGTCTCGAGATTCTAACC 58.663 45.833 19.90 4.10 32.87 2.85
2206 4742 4.399934 ACTCTTGTCTCGAGATTCTAACCC 59.600 45.833 19.90 3.31 32.87 4.11
2207 4743 4.601084 TCTTGTCTCGAGATTCTAACCCT 58.399 43.478 19.90 0.00 0.00 4.34
2208 4744 5.752650 TCTTGTCTCGAGATTCTAACCCTA 58.247 41.667 19.90 0.00 0.00 3.53
2209 4745 6.366340 TCTTGTCTCGAGATTCTAACCCTAT 58.634 40.000 19.90 0.00 0.00 2.57
2210 4746 6.487331 TCTTGTCTCGAGATTCTAACCCTATC 59.513 42.308 19.90 0.98 0.00 2.08
2211 4747 5.691896 TGTCTCGAGATTCTAACCCTATCA 58.308 41.667 19.90 3.87 0.00 2.15
2212 4748 6.307776 TGTCTCGAGATTCTAACCCTATCAT 58.692 40.000 19.90 0.00 0.00 2.45
2213 4749 7.459234 TGTCTCGAGATTCTAACCCTATCATA 58.541 38.462 19.90 0.00 0.00 2.15
2214 4750 7.390996 TGTCTCGAGATTCTAACCCTATCATAC 59.609 40.741 19.90 0.00 0.00 2.39
2215 4751 7.390996 GTCTCGAGATTCTAACCCTATCATACA 59.609 40.741 19.90 0.00 0.00 2.29
2216 4752 7.942894 TCTCGAGATTCTAACCCTATCATACAA 59.057 37.037 12.08 0.00 0.00 2.41
2217 4753 8.473358 TCGAGATTCTAACCCTATCATACAAA 57.527 34.615 0.00 0.00 0.00 2.83
2218 4754 8.920174 TCGAGATTCTAACCCTATCATACAAAA 58.080 33.333 0.00 0.00 0.00 2.44
2219 4755 9.197694 CGAGATTCTAACCCTATCATACAAAAG 57.802 37.037 0.00 0.00 0.00 2.27
2220 4756 8.910351 AGATTCTAACCCTATCATACAAAAGC 57.090 34.615 0.00 0.00 0.00 3.51
2221 4757 7.939588 AGATTCTAACCCTATCATACAAAAGCC 59.060 37.037 0.00 0.00 0.00 4.35
2222 4758 6.824958 TCTAACCCTATCATACAAAAGCCT 57.175 37.500 0.00 0.00 0.00 4.58
2223 4759 7.924358 TCTAACCCTATCATACAAAAGCCTA 57.076 36.000 0.00 0.00 0.00 3.93
2224 4760 7.732996 TCTAACCCTATCATACAAAAGCCTAC 58.267 38.462 0.00 0.00 0.00 3.18
2225 4761 6.576778 AACCCTATCATACAAAAGCCTACT 57.423 37.500 0.00 0.00 0.00 2.57
2226 4762 6.576778 ACCCTATCATACAAAAGCCTACTT 57.423 37.500 0.00 0.00 37.90 2.24
2238 4774 4.546829 AAGCCTACTTTTCCGACATACA 57.453 40.909 0.00 0.00 29.41 2.29
2239 4775 4.546829 AGCCTACTTTTCCGACATACAA 57.453 40.909 0.00 0.00 0.00 2.41
2240 4776 4.901868 AGCCTACTTTTCCGACATACAAA 58.098 39.130 0.00 0.00 0.00 2.83
2241 4777 5.497474 AGCCTACTTTTCCGACATACAAAT 58.503 37.500 0.00 0.00 0.00 2.32
2242 4778 6.646267 AGCCTACTTTTCCGACATACAAATA 58.354 36.000 0.00 0.00 0.00 1.40
2243 4779 6.537660 AGCCTACTTTTCCGACATACAAATAC 59.462 38.462 0.00 0.00 0.00 1.89
2244 4780 6.238293 GCCTACTTTTCCGACATACAAATACC 60.238 42.308 0.00 0.00 0.00 2.73
2245 4781 6.259387 CCTACTTTTCCGACATACAAATACCC 59.741 42.308 0.00 0.00 0.00 3.69
2246 4782 5.562635 ACTTTTCCGACATACAAATACCCA 58.437 37.500 0.00 0.00 0.00 4.51
2247 4783 6.005198 ACTTTTCCGACATACAAATACCCAA 58.995 36.000 0.00 0.00 0.00 4.12
2248 4784 6.490721 ACTTTTCCGACATACAAATACCCAAA 59.509 34.615 0.00 0.00 0.00 3.28
2249 4785 7.177744 ACTTTTCCGACATACAAATACCCAAAT 59.822 33.333 0.00 0.00 0.00 2.32
2250 4786 6.443934 TTCCGACATACAAATACCCAAATG 57.556 37.500 0.00 0.00 0.00 2.32
2251 4787 4.336993 TCCGACATACAAATACCCAAATGC 59.663 41.667 0.00 0.00 0.00 3.56
2252 4788 4.338118 CCGACATACAAATACCCAAATGCT 59.662 41.667 0.00 0.00 0.00 3.79
2253 4789 5.163561 CCGACATACAAATACCCAAATGCTT 60.164 40.000 0.00 0.00 0.00 3.91
2254 4790 6.038825 CCGACATACAAATACCCAAATGCTTA 59.961 38.462 0.00 0.00 0.00 3.09
2255 4791 7.132213 CGACATACAAATACCCAAATGCTTAG 58.868 38.462 0.00 0.00 0.00 2.18
2256 4792 6.805713 ACATACAAATACCCAAATGCTTAGC 58.194 36.000 0.00 0.00 0.00 3.09
2257 4793 4.736126 ACAAATACCCAAATGCTTAGCC 57.264 40.909 0.29 0.00 0.00 3.93
2258 4794 3.450817 ACAAATACCCAAATGCTTAGCCC 59.549 43.478 0.29 0.00 0.00 5.19
2259 4795 2.381752 ATACCCAAATGCTTAGCCCC 57.618 50.000 0.29 0.00 0.00 5.80
2260 4796 0.260523 TACCCAAATGCTTAGCCCCC 59.739 55.000 0.29 0.00 0.00 5.40
2261 4797 1.001503 CCCAAATGCTTAGCCCCCA 59.998 57.895 0.29 0.00 0.00 4.96
2262 4798 1.329913 CCCAAATGCTTAGCCCCCAC 61.330 60.000 0.29 0.00 0.00 4.61
2263 4799 1.666209 CCAAATGCTTAGCCCCCACG 61.666 60.000 0.29 0.00 0.00 4.94
2264 4800 0.679640 CAAATGCTTAGCCCCCACGA 60.680 55.000 0.29 0.00 0.00 4.35
2265 4801 0.039035 AAATGCTTAGCCCCCACGAA 59.961 50.000 0.29 0.00 0.00 3.85
2266 4802 0.394352 AATGCTTAGCCCCCACGAAG 60.394 55.000 0.29 0.00 0.00 3.79
2267 4803 1.271840 ATGCTTAGCCCCCACGAAGA 61.272 55.000 0.29 0.00 0.00 2.87
2268 4804 1.449778 GCTTAGCCCCCACGAAGAC 60.450 63.158 0.00 0.00 0.00 3.01
2269 4805 1.221021 CTTAGCCCCCACGAAGACC 59.779 63.158 0.00 0.00 0.00 3.85
2270 4806 2.253403 CTTAGCCCCCACGAAGACCC 62.253 65.000 0.00 0.00 0.00 4.46
2271 4807 3.549433 TAGCCCCCACGAAGACCCA 62.549 63.158 0.00 0.00 0.00 4.51
2272 4808 3.961414 GCCCCCACGAAGACCCAA 61.961 66.667 0.00 0.00 0.00 4.12
2273 4809 2.033602 CCCCCACGAAGACCCAAC 59.966 66.667 0.00 0.00 0.00 3.77
2274 4810 2.358247 CCCCACGAAGACCCAACG 60.358 66.667 0.00 0.00 0.00 4.10
2275 4811 2.358247 CCCACGAAGACCCAACGG 60.358 66.667 0.00 0.00 0.00 4.44
2287 4823 3.645975 CAACGGTCGGCTGCGTTT 61.646 61.111 8.03 0.00 0.00 3.60
2288 4824 3.343421 AACGGTCGGCTGCGTTTC 61.343 61.111 5.26 0.00 0.00 2.78
2289 4825 4.595538 ACGGTCGGCTGCGTTTCA 62.596 61.111 0.00 0.00 0.00 2.69
2290 4826 3.777925 CGGTCGGCTGCGTTTCAG 61.778 66.667 0.00 0.00 45.62 3.02
2291 4827 2.357034 GGTCGGCTGCGTTTCAGA 60.357 61.111 0.00 0.00 45.72 3.27
2292 4828 1.741770 GGTCGGCTGCGTTTCAGAT 60.742 57.895 0.00 0.00 45.72 2.90
2293 4829 1.298859 GGTCGGCTGCGTTTCAGATT 61.299 55.000 0.00 0.00 45.72 2.40
2294 4830 0.095417 GTCGGCTGCGTTTCAGATTC 59.905 55.000 0.00 0.00 45.72 2.52
2295 4831 0.037326 TCGGCTGCGTTTCAGATTCT 60.037 50.000 0.00 0.00 45.72 2.40
2296 4832 0.371645 CGGCTGCGTTTCAGATTCTC 59.628 55.000 0.00 0.00 45.72 2.87
2297 4833 0.371645 GGCTGCGTTTCAGATTCTCG 59.628 55.000 0.00 0.00 45.72 4.04
2298 4834 1.350193 GCTGCGTTTCAGATTCTCGA 58.650 50.000 0.00 0.00 45.72 4.04
2299 4835 1.929836 GCTGCGTTTCAGATTCTCGAT 59.070 47.619 0.00 0.00 45.72 3.59
2300 4836 3.116300 GCTGCGTTTCAGATTCTCGATA 58.884 45.455 0.00 0.00 45.72 2.92
2301 4837 3.181377 GCTGCGTTTCAGATTCTCGATAG 59.819 47.826 0.00 0.00 45.72 2.08
2302 4838 3.706698 TGCGTTTCAGATTCTCGATAGG 58.293 45.455 0.00 0.00 0.00 2.57
2303 4839 3.380320 TGCGTTTCAGATTCTCGATAGGA 59.620 43.478 0.00 0.00 0.00 2.94
2304 4840 3.731717 GCGTTTCAGATTCTCGATAGGAC 59.268 47.826 0.00 0.00 0.00 3.85
2305 4841 4.733815 GCGTTTCAGATTCTCGATAGGACA 60.734 45.833 0.00 0.00 0.00 4.02
2306 4842 5.340803 CGTTTCAGATTCTCGATAGGACAA 58.659 41.667 0.00 0.00 0.00 3.18
2307 4843 5.980116 CGTTTCAGATTCTCGATAGGACAAT 59.020 40.000 0.00 0.00 0.00 2.71
2308 4844 6.074623 CGTTTCAGATTCTCGATAGGACAATG 60.075 42.308 0.00 0.00 0.00 2.82
2309 4845 6.471233 TTCAGATTCTCGATAGGACAATGT 57.529 37.500 0.00 0.00 0.00 2.71
2310 4846 6.078202 TCAGATTCTCGATAGGACAATGTC 57.922 41.667 4.51 4.51 0.00 3.06
2311 4847 5.594317 TCAGATTCTCGATAGGACAATGTCA 59.406 40.000 15.86 0.00 33.68 3.58
2312 4848 5.689514 CAGATTCTCGATAGGACAATGTCAC 59.310 44.000 15.86 4.83 33.68 3.67
2313 4849 5.360999 AGATTCTCGATAGGACAATGTCACA 59.639 40.000 15.86 2.12 33.68 3.58
2314 4850 5.598416 TTCTCGATAGGACAATGTCACAT 57.402 39.130 15.86 7.16 33.68 3.21
2315 4851 4.936891 TCTCGATAGGACAATGTCACATG 58.063 43.478 15.86 0.00 33.68 3.21
2316 4852 4.402474 TCTCGATAGGACAATGTCACATGT 59.598 41.667 15.86 0.00 33.68 3.21
2317 4853 5.084818 TCGATAGGACAATGTCACATGTT 57.915 39.130 15.86 0.00 33.68 2.71
2318 4854 4.869861 TCGATAGGACAATGTCACATGTTG 59.130 41.667 15.86 3.44 33.68 3.33
2319 4855 4.869861 CGATAGGACAATGTCACATGTTGA 59.130 41.667 15.86 0.00 33.68 3.18
2320 4856 5.525012 CGATAGGACAATGTCACATGTTGAT 59.475 40.000 15.86 0.00 36.32 2.57
2321 4857 6.510638 CGATAGGACAATGTCACATGTTGATG 60.511 42.308 15.86 0.00 36.32 3.07
2322 4858 3.192001 AGGACAATGTCACATGTTGATGC 59.808 43.478 15.86 0.00 36.32 3.91
2323 4859 3.192001 GGACAATGTCACATGTTGATGCT 59.808 43.478 15.86 0.00 36.32 3.79
2324 4860 4.321452 GGACAATGTCACATGTTGATGCTT 60.321 41.667 15.86 0.00 36.32 3.91
2325 4861 5.204409 ACAATGTCACATGTTGATGCTTT 57.796 34.783 0.00 0.00 36.32 3.51
2326 4862 4.986034 ACAATGTCACATGTTGATGCTTTG 59.014 37.500 0.00 4.81 36.32 2.77
2327 4863 4.859304 ATGTCACATGTTGATGCTTTGT 57.141 36.364 0.00 0.00 36.32 2.83
2328 4864 4.652421 TGTCACATGTTGATGCTTTGTT 57.348 36.364 0.00 0.00 36.32 2.83
2329 4865 4.361420 TGTCACATGTTGATGCTTTGTTG 58.639 39.130 0.00 0.00 36.32 3.33
2330 4866 4.142204 TGTCACATGTTGATGCTTTGTTGT 60.142 37.500 0.00 0.00 36.32 3.32
2331 4867 4.805192 GTCACATGTTGATGCTTTGTTGTT 59.195 37.500 0.00 0.00 36.32 2.83
2332 4868 4.804665 TCACATGTTGATGCTTTGTTGTTG 59.195 37.500 0.00 0.00 32.14 3.33
2333 4869 4.567558 CACATGTTGATGCTTTGTTGTTGT 59.432 37.500 0.00 0.00 32.14 3.32
2334 4870 5.063691 CACATGTTGATGCTTTGTTGTTGTT 59.936 36.000 0.00 0.00 32.14 2.83
2335 4871 5.063691 ACATGTTGATGCTTTGTTGTTGTTG 59.936 36.000 0.00 0.00 32.14 3.33
2336 4872 4.814147 TGTTGATGCTTTGTTGTTGTTGA 58.186 34.783 0.00 0.00 0.00 3.18
2337 4873 5.233225 TGTTGATGCTTTGTTGTTGTTGAA 58.767 33.333 0.00 0.00 0.00 2.69
2338 4874 5.698089 TGTTGATGCTTTGTTGTTGTTGAAA 59.302 32.000 0.00 0.00 0.00 2.69
2339 4875 6.203530 TGTTGATGCTTTGTTGTTGTTGAAAA 59.796 30.769 0.00 0.00 0.00 2.29
2360 4896 9.825972 TGAAAACATATGAATTTCTCTCGTTTC 57.174 29.630 25.02 12.35 34.84 2.78
2361 4897 8.880768 AAAACATATGAATTTCTCTCGTTTCG 57.119 30.769 10.38 0.00 0.00 3.46
2362 4898 6.589830 ACATATGAATTTCTCTCGTTTCGG 57.410 37.500 10.38 0.00 0.00 4.30
2363 4899 6.338146 ACATATGAATTTCTCTCGTTTCGGA 58.662 36.000 10.38 0.00 0.00 4.55
2364 4900 6.986817 ACATATGAATTTCTCTCGTTTCGGAT 59.013 34.615 10.38 0.00 0.00 4.18
2365 4901 5.975410 ATGAATTTCTCTCGTTTCGGATC 57.025 39.130 0.00 0.00 0.00 3.36
2366 4902 5.073311 TGAATTTCTCTCGTTTCGGATCT 57.927 39.130 0.00 0.00 0.00 2.75
2367 4903 5.103000 TGAATTTCTCTCGTTTCGGATCTC 58.897 41.667 0.00 0.00 0.00 2.75
2368 4904 3.505464 TTTCTCTCGTTTCGGATCTCC 57.495 47.619 0.00 0.00 0.00 3.71
2369 4905 1.390565 TCTCTCGTTTCGGATCTCCC 58.609 55.000 0.00 0.00 0.00 4.30
2370 4906 1.103803 CTCTCGTTTCGGATCTCCCA 58.896 55.000 0.00 0.00 34.14 4.37
2371 4907 0.815734 TCTCGTTTCGGATCTCCCAC 59.184 55.000 0.00 0.00 34.14 4.61
2372 4908 0.179108 CTCGTTTCGGATCTCCCACC 60.179 60.000 0.00 0.00 34.14 4.61
2373 4909 0.901114 TCGTTTCGGATCTCCCACCA 60.901 55.000 0.00 0.00 34.14 4.17
2374 4910 0.036765 CGTTTCGGATCTCCCACCAA 60.037 55.000 0.00 0.00 34.14 3.67
2375 4911 1.609580 CGTTTCGGATCTCCCACCAAA 60.610 52.381 0.00 0.00 34.14 3.28
2376 4912 1.810755 GTTTCGGATCTCCCACCAAAC 59.189 52.381 0.00 0.00 34.14 2.93
2377 4913 1.358152 TTCGGATCTCCCACCAAACT 58.642 50.000 0.00 0.00 34.14 2.66
2378 4914 0.613260 TCGGATCTCCCACCAAACTG 59.387 55.000 0.00 0.00 34.14 3.16
2379 4915 0.613260 CGGATCTCCCACCAAACTGA 59.387 55.000 0.00 0.00 34.14 3.41
2380 4916 1.676014 CGGATCTCCCACCAAACTGAC 60.676 57.143 0.00 0.00 34.14 3.51
2381 4917 1.351017 GGATCTCCCACCAAACTGACA 59.649 52.381 0.00 0.00 34.14 3.58
2382 4918 2.025887 GGATCTCCCACCAAACTGACAT 60.026 50.000 0.00 0.00 34.14 3.06
2383 4919 2.566833 TCTCCCACCAAACTGACATG 57.433 50.000 0.00 0.00 0.00 3.21
2384 4920 1.073763 TCTCCCACCAAACTGACATGG 59.926 52.381 0.00 0.00 42.60 3.66
2393 4929 3.686726 CCAAACTGACATGGTAAGAGAGC 59.313 47.826 0.00 0.00 31.84 4.09
2394 4930 3.618690 AACTGACATGGTAAGAGAGCC 57.381 47.619 0.00 0.00 0.00 4.70
2395 4931 1.834263 ACTGACATGGTAAGAGAGCCC 59.166 52.381 0.00 0.00 0.00 5.19
2396 4932 1.833630 CTGACATGGTAAGAGAGCCCA 59.166 52.381 0.00 0.00 0.00 5.36
2397 4933 1.555075 TGACATGGTAAGAGAGCCCAC 59.445 52.381 0.00 0.00 0.00 4.61
2398 4934 0.537188 ACATGGTAAGAGAGCCCACG 59.463 55.000 0.00 0.00 0.00 4.94
2399 4935 0.179073 CATGGTAAGAGAGCCCACGG 60.179 60.000 0.00 0.00 0.00 4.94
2412 4948 4.319133 CACGGCTTTGGTGGCTAT 57.681 55.556 0.00 0.00 0.00 2.97
2413 4949 2.566824 CACGGCTTTGGTGGCTATT 58.433 52.632 0.00 0.00 0.00 1.73
2414 4950 1.745232 CACGGCTTTGGTGGCTATTA 58.255 50.000 0.00 0.00 0.00 0.98
2415 4951 2.297701 CACGGCTTTGGTGGCTATTAT 58.702 47.619 0.00 0.00 0.00 1.28
2416 4952 2.033299 CACGGCTTTGGTGGCTATTATG 59.967 50.000 0.00 0.00 0.00 1.90
2417 4953 1.608590 CGGCTTTGGTGGCTATTATGG 59.391 52.381 0.00 0.00 0.00 2.74
2418 4954 1.963515 GGCTTTGGTGGCTATTATGGG 59.036 52.381 0.00 0.00 0.00 4.00
2419 4955 1.341209 GCTTTGGTGGCTATTATGGGC 59.659 52.381 0.00 0.00 0.00 5.36
2420 4956 2.665165 CTTTGGTGGCTATTATGGGCA 58.335 47.619 0.00 0.00 36.92 5.36
2421 4957 3.233507 CTTTGGTGGCTATTATGGGCAT 58.766 45.455 8.17 0.00 41.11 4.40
2422 4958 2.291209 TGGTGGCTATTATGGGCATG 57.709 50.000 8.17 0.00 41.11 4.06
2423 4959 1.779700 TGGTGGCTATTATGGGCATGA 59.220 47.619 8.17 0.00 41.11 3.07
2424 4960 2.162681 GGTGGCTATTATGGGCATGAC 58.837 52.381 8.17 0.00 41.11 3.06
2425 4961 1.806542 GTGGCTATTATGGGCATGACG 59.193 52.381 8.17 0.00 41.11 4.35
2426 4962 1.271325 TGGCTATTATGGGCATGACGG 60.271 52.381 0.00 0.00 34.37 4.79
2427 4963 1.003118 GGCTATTATGGGCATGACGGA 59.997 52.381 0.00 0.00 0.00 4.69
2428 4964 2.350522 GCTATTATGGGCATGACGGAG 58.649 52.381 0.00 0.00 0.00 4.63
2429 4965 2.028112 GCTATTATGGGCATGACGGAGA 60.028 50.000 0.00 0.00 0.00 3.71
2430 4966 3.557054 GCTATTATGGGCATGACGGAGAA 60.557 47.826 0.00 0.00 0.00 2.87
2431 4967 2.620251 TTATGGGCATGACGGAGAAG 57.380 50.000 0.00 0.00 0.00 2.85
2432 4968 1.788229 TATGGGCATGACGGAGAAGA 58.212 50.000 0.00 0.00 0.00 2.87
2433 4969 1.135094 ATGGGCATGACGGAGAAGAT 58.865 50.000 0.00 0.00 0.00 2.40
2434 4970 0.178767 TGGGCATGACGGAGAAGATG 59.821 55.000 0.00 0.00 0.00 2.90
2435 4971 0.465705 GGGCATGACGGAGAAGATGA 59.534 55.000 0.00 0.00 0.00 2.92
2436 4972 1.071385 GGGCATGACGGAGAAGATGAT 59.929 52.381 0.00 0.00 0.00 2.45
2437 4973 2.411904 GGCATGACGGAGAAGATGATC 58.588 52.381 0.00 0.00 0.00 2.92
2438 4974 2.411904 GCATGACGGAGAAGATGATCC 58.588 52.381 0.00 0.00 0.00 3.36
2439 4975 2.869636 GCATGACGGAGAAGATGATCCC 60.870 54.545 0.00 0.00 31.43 3.85
2440 4976 2.159179 TGACGGAGAAGATGATCCCA 57.841 50.000 0.00 0.00 31.43 4.37
2441 4977 1.757118 TGACGGAGAAGATGATCCCAC 59.243 52.381 0.00 0.00 31.43 4.61
2442 4978 1.069358 GACGGAGAAGATGATCCCACC 59.931 57.143 0.00 0.00 31.43 4.61
2443 4979 1.123077 CGGAGAAGATGATCCCACCA 58.877 55.000 0.00 0.00 31.43 4.17
2444 4980 1.486310 CGGAGAAGATGATCCCACCAA 59.514 52.381 0.00 0.00 31.43 3.67
2445 4981 2.484417 CGGAGAAGATGATCCCACCAAG 60.484 54.545 0.00 0.00 31.43 3.61
2446 4982 2.158696 GGAGAAGATGATCCCACCAAGG 60.159 54.545 0.00 0.00 37.03 3.61
2447 4983 2.774234 GAGAAGATGATCCCACCAAGGA 59.226 50.000 0.00 0.00 41.22 3.36
2456 4992 4.879295 ATCCCACCAAGGATAAATGTCA 57.121 40.909 0.00 0.00 45.14 3.58
2457 4993 4.879295 TCCCACCAAGGATAAATGTCAT 57.121 40.909 0.00 0.00 41.22 3.06
2458 4994 5.205517 TCCCACCAAGGATAAATGTCATT 57.794 39.130 0.00 0.00 41.22 2.57
2459 4995 4.955450 TCCCACCAAGGATAAATGTCATTG 59.045 41.667 0.00 0.00 41.22 2.82
2460 4996 4.955450 CCCACCAAGGATAAATGTCATTGA 59.045 41.667 6.19 0.00 41.11 2.57
2461 4997 5.421693 CCCACCAAGGATAAATGTCATTGAA 59.578 40.000 6.19 0.00 41.11 2.69
2462 4998 6.406177 CCCACCAAGGATAAATGTCATTGAAG 60.406 42.308 6.19 0.00 41.11 3.02
2463 4999 6.153340 CCACCAAGGATAAATGTCATTGAAGT 59.847 38.462 6.19 0.00 41.11 3.01
2464 5000 7.309990 CCACCAAGGATAAATGTCATTGAAGTT 60.310 37.037 6.19 0.00 41.11 2.66
2465 5001 7.543172 CACCAAGGATAAATGTCATTGAAGTTG 59.457 37.037 6.19 0.88 41.11 3.16
2466 5002 6.532657 CCAAGGATAAATGTCATTGAAGTTGC 59.467 38.462 6.19 0.00 41.11 4.17
2467 5003 7.318141 CAAGGATAAATGTCATTGAAGTTGCT 58.682 34.615 0.00 0.00 41.11 3.91
2468 5004 7.093322 AGGATAAATGTCATTGAAGTTGCTC 57.907 36.000 0.00 0.00 0.00 4.26
2469 5005 6.888632 AGGATAAATGTCATTGAAGTTGCTCT 59.111 34.615 0.00 0.00 0.00 4.09
2470 5006 8.049117 AGGATAAATGTCATTGAAGTTGCTCTA 58.951 33.333 0.00 0.00 0.00 2.43
2471 5007 8.125448 GGATAAATGTCATTGAAGTTGCTCTAC 58.875 37.037 0.00 0.00 0.00 2.59
2472 5008 6.882610 AAATGTCATTGAAGTTGCTCTACA 57.117 33.333 0.00 0.00 0.00 2.74
2473 5009 7.458409 AAATGTCATTGAAGTTGCTCTACAT 57.542 32.000 0.00 0.00 0.00 2.29
2474 5010 5.868043 TGTCATTGAAGTTGCTCTACATG 57.132 39.130 0.00 0.00 0.00 3.21
2475 5011 4.696877 TGTCATTGAAGTTGCTCTACATGG 59.303 41.667 0.00 0.00 0.00 3.66
2476 5012 4.937620 GTCATTGAAGTTGCTCTACATGGA 59.062 41.667 0.00 0.00 0.00 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
115 189 1.308069 ATTCGATTTGCAGCCGCTGT 61.308 50.000 21.29 1.29 39.64 4.40
159 233 4.024809 GGAAGAAGATAGCGTTAATGCACC 60.025 45.833 21.31 9.63 37.31 5.01
168 242 6.308566 ACTAAGGATAGGAAGAAGATAGCGT 58.691 40.000 0.00 0.00 33.15 5.07
350 429 1.056700 GCCCTTGCCTCTATCTCCCA 61.057 60.000 0.00 0.00 0.00 4.37
398 504 0.179936 GCTTCCTACATCTGCTGCCT 59.820 55.000 0.00 0.00 0.00 4.75
457 563 2.436417 GCATATGTTCACACCACCACT 58.564 47.619 4.29 0.00 0.00 4.00
472 578 1.401409 GCAAGCACACAACACGCATAT 60.401 47.619 0.00 0.00 0.00 1.78
474 580 1.299316 GCAAGCACACAACACGCAT 60.299 52.632 0.00 0.00 0.00 4.73
532 3028 2.359900 CAGCAAGTACTAAAGGGCAGG 58.640 52.381 0.00 0.00 0.00 4.85
661 3157 2.099141 TCCAGCAAGTGATAGTGCAC 57.901 50.000 9.40 9.40 43.42 4.57
704 3231 6.964464 TGGGCTATAAAAGTACTCATTCCAA 58.036 36.000 0.00 0.00 0.00 3.53
807 3335 7.331687 TTTCAGCAAGAATTTGGCTATAAAAGC 59.668 33.333 0.00 0.00 42.62 3.51
808 3336 8.761575 TTTCAGCAAGAATTTGGCTATAAAAG 57.238 30.769 0.00 0.00 35.83 2.27
809 3337 9.153721 CATTTCAGCAAGAATTTGGCTATAAAA 57.846 29.630 0.00 0.00 35.83 1.52
810 3338 8.530311 TCATTTCAGCAAGAATTTGGCTATAAA 58.470 29.630 0.00 0.00 35.83 1.40
811 3339 8.065473 TCATTTCAGCAAGAATTTGGCTATAA 57.935 30.769 0.00 0.00 35.83 0.98
812 3340 7.643569 TCATTTCAGCAAGAATTTGGCTATA 57.356 32.000 0.00 0.00 35.83 1.31
813 3341 6.534475 TCATTTCAGCAAGAATTTGGCTAT 57.466 33.333 0.00 0.00 35.83 2.97
814 3342 5.622914 GCTCATTTCAGCAAGAATTTGGCTA 60.623 40.000 0.00 0.00 39.43 3.93
815 3343 4.817517 CTCATTTCAGCAAGAATTTGGCT 58.182 39.130 0.00 0.00 35.83 4.75
816 3344 3.370061 GCTCATTTCAGCAAGAATTTGGC 59.630 43.478 0.00 0.00 39.43 4.52
817 3345 4.817517 AGCTCATTTCAGCAAGAATTTGG 58.182 39.130 0.00 0.00 42.40 3.28
818 3346 6.780706 AAAGCTCATTTCAGCAAGAATTTG 57.219 33.333 0.00 0.00 42.40 2.32
820 3348 9.798994 CTATAAAAGCTCATTTCAGCAAGAATT 57.201 29.630 0.00 0.00 42.40 2.17
1021 3551 1.988982 TATTGCCCCGTAGCCATGCA 61.989 55.000 0.00 0.00 0.00 3.96
1049 3579 1.968493 TCGCTAAAGGGTCACTTGAGT 59.032 47.619 0.94 0.00 39.54 3.41
1145 3675 0.035317 AGCGGCTGACTCATCACAAA 59.965 50.000 0.00 0.00 0.00 2.83
1221 3751 5.509498 AGCCTTTCACTTGAAGCCATTATA 58.491 37.500 0.00 0.00 35.21 0.98
1338 3868 2.802816 GGCATAGTAATGAGCAACGGAG 59.197 50.000 0.00 0.00 34.84 4.63
1342 3872 6.263168 ACCAAATAGGCATAGTAATGAGCAAC 59.737 38.462 0.00 0.00 43.14 4.17
1500 4030 3.077229 TGTTGGTTGTCATCAAAAGCG 57.923 42.857 0.00 0.00 35.20 4.68
1539 4071 5.912955 GGTTGTAATCAAAAGAACAAGTCCG 59.087 40.000 0.00 0.00 35.20 4.79
1645 4177 8.855110 ACATTTCCATATGTAAAACACAAGTGA 58.145 29.630 7.28 0.00 41.55 3.41
1800 4334 0.626382 TGTTTGGTTGGTGGGTGAGA 59.374 50.000 0.00 0.00 0.00 3.27
1870 4405 4.202524 TGGTTGTGTGGATAAAGTTAGCCT 60.203 41.667 6.89 0.00 39.86 4.58
1905 4440 2.194859 CCAGCTGGATAGGGATAGCAT 58.805 52.381 29.88 0.00 38.59 3.79
1906 4441 1.149923 TCCAGCTGGATAGGGATAGCA 59.850 52.381 32.00 4.64 39.78 3.49
1931 4467 5.551583 AGATGTTAAGGTGGATATGGGCATA 59.448 40.000 0.00 0.00 0.00 3.14
1978 4514 1.207089 CGTCTAAGAGGATGGGCAACA 59.793 52.381 0.00 0.00 39.74 3.33
1979 4515 1.480954 TCGTCTAAGAGGATGGGCAAC 59.519 52.381 0.00 0.00 0.00 4.17
1980 4516 1.860641 TCGTCTAAGAGGATGGGCAA 58.139 50.000 0.00 0.00 0.00 4.52
1981 4517 2.088104 ATCGTCTAAGAGGATGGGCA 57.912 50.000 0.00 0.00 36.10 5.36
1982 4518 3.158676 AGTATCGTCTAAGAGGATGGGC 58.841 50.000 0.00 0.00 37.65 5.36
1983 4519 4.658063 AGAGTATCGTCTAAGAGGATGGG 58.342 47.826 0.00 0.00 42.67 4.00
1984 4520 6.642707 AAAGAGTATCGTCTAAGAGGATGG 57.357 41.667 0.00 0.00 42.67 3.51
1985 4521 7.708051 TGAAAAGAGTATCGTCTAAGAGGATG 58.292 38.462 0.00 0.00 42.67 3.51
1986 4522 7.013846 CCTGAAAAGAGTATCGTCTAAGAGGAT 59.986 40.741 0.00 0.00 42.67 3.24
1987 4523 6.319152 CCTGAAAAGAGTATCGTCTAAGAGGA 59.681 42.308 0.00 0.00 42.67 3.71
1988 4524 6.095720 ACCTGAAAAGAGTATCGTCTAAGAGG 59.904 42.308 0.00 0.00 42.67 3.69
1989 4525 7.090953 ACCTGAAAAGAGTATCGTCTAAGAG 57.909 40.000 0.00 0.00 42.67 2.85
1990 4526 7.313646 CAACCTGAAAAGAGTATCGTCTAAGA 58.686 38.462 0.00 0.00 42.67 2.10
1991 4527 6.531948 CCAACCTGAAAAGAGTATCGTCTAAG 59.468 42.308 0.00 0.00 42.67 2.18
1992 4528 6.395629 CCAACCTGAAAAGAGTATCGTCTAA 58.604 40.000 0.00 0.00 42.67 2.10
1993 4529 5.623824 GCCAACCTGAAAAGAGTATCGTCTA 60.624 44.000 0.00 0.00 42.67 2.59
1994 4530 4.822026 CCAACCTGAAAAGAGTATCGTCT 58.178 43.478 0.00 0.00 42.67 4.18
1995 4531 3.371285 GCCAACCTGAAAAGAGTATCGTC 59.629 47.826 0.00 0.00 42.67 4.20
1996 4532 3.335579 GCCAACCTGAAAAGAGTATCGT 58.664 45.455 0.00 0.00 42.67 3.73
1997 4533 2.678336 GGCCAACCTGAAAAGAGTATCG 59.322 50.000 0.00 0.00 42.67 2.92
2011 4547 2.551071 GCTAGATGACCATAGGCCAACC 60.551 54.545 5.01 0.00 0.00 3.77
2012 4548 2.370189 AGCTAGATGACCATAGGCCAAC 59.630 50.000 5.01 0.00 0.00 3.77
2013 4549 2.369860 CAGCTAGATGACCATAGGCCAA 59.630 50.000 5.01 0.00 0.00 4.52
2014 4550 1.973515 CAGCTAGATGACCATAGGCCA 59.026 52.381 5.01 0.00 0.00 5.36
2015 4551 1.338579 GCAGCTAGATGACCATAGGCC 60.339 57.143 13.26 0.00 0.00 5.19
2016 4552 1.622811 AGCAGCTAGATGACCATAGGC 59.377 52.381 13.26 0.00 0.00 3.93
2017 4553 2.896044 TCAGCAGCTAGATGACCATAGG 59.104 50.000 13.26 0.00 37.82 2.57
2018 4554 3.825585 TCTCAGCAGCTAGATGACCATAG 59.174 47.826 13.26 1.31 37.82 2.23
2019 4555 3.837355 TCTCAGCAGCTAGATGACCATA 58.163 45.455 13.26 0.00 37.82 2.74
2020 4556 2.675583 TCTCAGCAGCTAGATGACCAT 58.324 47.619 13.26 0.00 37.82 3.55
2021 4557 2.149973 TCTCAGCAGCTAGATGACCA 57.850 50.000 13.26 0.00 37.82 4.02
2022 4558 3.749665 AATCTCAGCAGCTAGATGACC 57.250 47.619 13.26 0.00 37.82 4.02
2023 4559 7.153985 AGATTTAATCTCAGCAGCTAGATGAC 58.846 38.462 13.26 3.12 37.82 3.06
2024 4560 7.300556 AGATTTAATCTCAGCAGCTAGATGA 57.699 36.000 13.26 1.35 41.05 2.92
2038 4574 7.500992 TCTAACTTCCATGCGAGATTTAATCT 58.499 34.615 7.23 7.23 43.70 2.40
2039 4575 7.439655 ACTCTAACTTCCATGCGAGATTTAATC 59.560 37.037 0.00 0.00 0.00 1.75
2040 4576 7.275920 ACTCTAACTTCCATGCGAGATTTAAT 58.724 34.615 0.00 0.00 0.00 1.40
2041 4577 6.640518 ACTCTAACTTCCATGCGAGATTTAA 58.359 36.000 0.00 0.00 0.00 1.52
2042 4578 6.222038 ACTCTAACTTCCATGCGAGATTTA 57.778 37.500 0.00 0.00 0.00 1.40
2043 4579 5.091261 ACTCTAACTTCCATGCGAGATTT 57.909 39.130 0.00 0.00 0.00 2.17
2044 4580 4.744795 ACTCTAACTTCCATGCGAGATT 57.255 40.909 0.00 0.00 0.00 2.40
2045 4581 4.744795 AACTCTAACTTCCATGCGAGAT 57.255 40.909 0.00 0.00 0.00 2.75
2046 4582 4.245660 CAAACTCTAACTTCCATGCGAGA 58.754 43.478 0.00 0.00 0.00 4.04
2047 4583 3.997021 ACAAACTCTAACTTCCATGCGAG 59.003 43.478 0.00 0.00 0.00 5.03
2048 4584 4.002906 ACAAACTCTAACTTCCATGCGA 57.997 40.909 0.00 0.00 0.00 5.10
2049 4585 4.378459 GGAACAAACTCTAACTTCCATGCG 60.378 45.833 0.00 0.00 32.16 4.73
2050 4586 4.762251 AGGAACAAACTCTAACTTCCATGC 59.238 41.667 0.00 0.00 34.01 4.06
2051 4587 5.120830 CGAGGAACAAACTCTAACTTCCATG 59.879 44.000 0.00 0.00 34.01 3.66
2052 4588 5.238583 CGAGGAACAAACTCTAACTTCCAT 58.761 41.667 0.00 0.00 34.01 3.41
2053 4589 4.502604 CCGAGGAACAAACTCTAACTTCCA 60.503 45.833 0.00 0.00 34.01 3.53
2054 4590 3.995048 CCGAGGAACAAACTCTAACTTCC 59.005 47.826 0.00 0.00 32.83 3.46
2055 4591 4.879598 TCCGAGGAACAAACTCTAACTTC 58.120 43.478 0.00 0.00 32.83 3.01
2056 4592 4.950205 TCCGAGGAACAAACTCTAACTT 57.050 40.909 0.00 0.00 32.83 2.66
2057 4593 4.950205 TTCCGAGGAACAAACTCTAACT 57.050 40.909 0.00 0.00 32.83 2.24
2058 4594 5.055144 ACTTTCCGAGGAACAAACTCTAAC 58.945 41.667 3.71 0.00 33.41 2.34
2059 4595 5.286267 ACTTTCCGAGGAACAAACTCTAA 57.714 39.130 3.71 0.00 33.41 2.10
2060 4596 4.950205 ACTTTCCGAGGAACAAACTCTA 57.050 40.909 3.71 0.00 33.41 2.43
2061 4597 3.840124 ACTTTCCGAGGAACAAACTCT 57.160 42.857 3.71 0.00 33.41 3.24
2062 4598 5.055144 ACTAACTTTCCGAGGAACAAACTC 58.945 41.667 3.71 0.00 33.41 3.01
2063 4599 5.032327 ACTAACTTTCCGAGGAACAAACT 57.968 39.130 3.71 0.00 33.41 2.66
2064 4600 6.218746 TCTACTAACTTTCCGAGGAACAAAC 58.781 40.000 3.71 0.00 33.41 2.93
2065 4601 6.409524 TCTACTAACTTTCCGAGGAACAAA 57.590 37.500 3.71 0.00 33.41 2.83
2066 4602 6.600882 ATCTACTAACTTTCCGAGGAACAA 57.399 37.500 3.71 0.00 33.41 2.83
2067 4603 7.558807 TGATATCTACTAACTTTCCGAGGAACA 59.441 37.037 3.71 0.00 33.41 3.18
2068 4604 7.938715 TGATATCTACTAACTTTCCGAGGAAC 58.061 38.462 3.71 0.00 33.41 3.62
2069 4605 8.529424 TTGATATCTACTAACTTTCCGAGGAA 57.471 34.615 3.98 0.00 0.00 3.36
2070 4606 8.529424 TTTGATATCTACTAACTTTCCGAGGA 57.471 34.615 3.98 0.00 0.00 3.71
2071 4607 9.765795 ATTTTGATATCTACTAACTTTCCGAGG 57.234 33.333 3.98 0.00 0.00 4.63
2084 4620 9.929180 TGATGTGCTACCTATTTTGATATCTAC 57.071 33.333 3.98 0.00 0.00 2.59
2089 4625 8.849168 CCAATTGATGTGCTACCTATTTTGATA 58.151 33.333 7.12 0.00 0.00 2.15
2090 4626 7.685155 GCCAATTGATGTGCTACCTATTTTGAT 60.685 37.037 7.12 0.00 0.00 2.57
2091 4627 6.405731 GCCAATTGATGTGCTACCTATTTTGA 60.406 38.462 7.12 0.00 0.00 2.69
2092 4628 5.750067 GCCAATTGATGTGCTACCTATTTTG 59.250 40.000 7.12 0.00 0.00 2.44
2093 4629 5.421693 TGCCAATTGATGTGCTACCTATTTT 59.578 36.000 7.12 0.00 0.00 1.82
2094 4630 4.955450 TGCCAATTGATGTGCTACCTATTT 59.045 37.500 7.12 0.00 0.00 1.40
2095 4631 4.535781 TGCCAATTGATGTGCTACCTATT 58.464 39.130 7.12 0.00 0.00 1.73
2096 4632 4.169059 TGCCAATTGATGTGCTACCTAT 57.831 40.909 7.12 0.00 0.00 2.57
2097 4633 3.643199 TGCCAATTGATGTGCTACCTA 57.357 42.857 7.12 0.00 0.00 3.08
2098 4634 2.512692 TGCCAATTGATGTGCTACCT 57.487 45.000 7.12 0.00 0.00 3.08
2099 4635 3.056607 AGTTTGCCAATTGATGTGCTACC 60.057 43.478 7.12 0.00 0.00 3.18
2100 4636 4.178545 AGTTTGCCAATTGATGTGCTAC 57.821 40.909 7.12 4.89 0.00 3.58
2101 4637 4.764308 TGTAGTTTGCCAATTGATGTGCTA 59.236 37.500 7.12 1.38 0.00 3.49
2102 4638 3.573538 TGTAGTTTGCCAATTGATGTGCT 59.426 39.130 7.12 2.33 0.00 4.40
2103 4639 3.911868 TGTAGTTTGCCAATTGATGTGC 58.088 40.909 7.12 1.96 0.00 4.57
2104 4640 3.922240 GCTGTAGTTTGCCAATTGATGTG 59.078 43.478 7.12 0.00 0.00 3.21
2105 4641 4.178545 GCTGTAGTTTGCCAATTGATGT 57.821 40.909 7.12 0.00 0.00 3.06
2114 4650 1.076332 CAGTACGGCTGTAGTTTGCC 58.924 55.000 10.47 0.00 45.25 4.52
2115 4651 2.074547 TCAGTACGGCTGTAGTTTGC 57.925 50.000 10.47 0.00 45.23 3.68
2116 4652 2.412089 GCTTCAGTACGGCTGTAGTTTG 59.588 50.000 10.47 7.71 45.23 2.93
2117 4653 2.612221 GGCTTCAGTACGGCTGTAGTTT 60.612 50.000 10.47 0.00 45.23 2.66
2118 4654 1.067071 GGCTTCAGTACGGCTGTAGTT 60.067 52.381 10.47 0.00 45.23 2.24
2119 4655 0.531200 GGCTTCAGTACGGCTGTAGT 59.469 55.000 5.39 6.40 45.23 2.73
2120 4656 0.818296 AGGCTTCAGTACGGCTGTAG 59.182 55.000 5.39 10.11 45.23 2.74
2121 4657 0.530744 CAGGCTTCAGTACGGCTGTA 59.469 55.000 0.00 0.00 45.51 2.74
2122 4658 1.293498 CAGGCTTCAGTACGGCTGT 59.707 57.895 2.42 2.42 45.51 4.40
2123 4659 4.192000 CAGGCTTCAGTACGGCTG 57.808 61.111 7.47 7.47 45.37 4.85
2124 4660 1.293498 CACAGGCTTCAGTACGGCT 59.707 57.895 0.00 0.00 36.36 5.52
2125 4661 0.602905 AACACAGGCTTCAGTACGGC 60.603 55.000 0.00 0.00 0.00 5.68
2126 4662 1.148310 CAACACAGGCTTCAGTACGG 58.852 55.000 0.00 0.00 0.00 4.02
2127 4663 0.512952 GCAACACAGGCTTCAGTACG 59.487 55.000 0.00 0.00 0.00 3.67
2128 4664 0.512952 CGCAACACAGGCTTCAGTAC 59.487 55.000 0.00 0.00 0.00 2.73
2129 4665 0.602638 CCGCAACACAGGCTTCAGTA 60.603 55.000 0.00 0.00 0.00 2.74
2130 4666 1.893808 CCGCAACACAGGCTTCAGT 60.894 57.895 0.00 0.00 0.00 3.41
2131 4667 0.602638 TACCGCAACACAGGCTTCAG 60.603 55.000 0.00 0.00 0.00 3.02
2132 4668 0.036164 ATACCGCAACACAGGCTTCA 59.964 50.000 0.00 0.00 0.00 3.02
2133 4669 0.447801 CATACCGCAACACAGGCTTC 59.552 55.000 0.00 0.00 0.00 3.86
2134 4670 0.960364 CCATACCGCAACACAGGCTT 60.960 55.000 0.00 0.00 0.00 4.35
2135 4671 1.377202 CCATACCGCAACACAGGCT 60.377 57.895 0.00 0.00 0.00 4.58
2136 4672 1.376683 TCCATACCGCAACACAGGC 60.377 57.895 0.00 0.00 0.00 4.85
2137 4673 1.358725 CGTCCATACCGCAACACAGG 61.359 60.000 0.00 0.00 0.00 4.00
2138 4674 2.078226 CGTCCATACCGCAACACAG 58.922 57.895 0.00 0.00 0.00 3.66
2139 4675 4.270392 CGTCCATACCGCAACACA 57.730 55.556 0.00 0.00 0.00 3.72
2146 4682 0.179084 ACCTGAATGCGTCCATACCG 60.179 55.000 0.00 0.00 0.00 4.02
2147 4683 1.134521 TGACCTGAATGCGTCCATACC 60.135 52.381 0.00 0.00 0.00 2.73
2148 4684 2.309528 TGACCTGAATGCGTCCATAC 57.690 50.000 0.00 0.00 0.00 2.39
2149 4685 2.224281 GGATGACCTGAATGCGTCCATA 60.224 50.000 0.00 0.00 37.59 2.74
2150 4686 1.475751 GGATGACCTGAATGCGTCCAT 60.476 52.381 0.00 0.00 37.59 3.41
2151 4687 0.107703 GGATGACCTGAATGCGTCCA 60.108 55.000 0.00 0.00 37.59 4.02
2152 4688 0.179000 AGGATGACCTGAATGCGTCC 59.821 55.000 0.00 0.00 45.92 4.79
2153 4689 3.768633 AGGATGACCTGAATGCGTC 57.231 52.632 0.00 0.00 45.92 5.19
2161 4697 6.342282 GTGCCTCACAAAAAGGATGACCTG 62.342 50.000 0.00 0.00 39.29 4.00
2162 4698 4.312677 GTGCCTCACAAAAAGGATGACCT 61.313 47.826 0.00 0.00 40.27 3.85
2163 4699 2.029918 GTGCCTCACAAAAAGGATGACC 60.030 50.000 0.00 0.00 35.83 4.02
2164 4700 2.887152 AGTGCCTCACAAAAAGGATGAC 59.113 45.455 0.00 0.00 36.74 3.06
2165 4701 3.149196 GAGTGCCTCACAAAAAGGATGA 58.851 45.455 0.00 0.00 36.74 2.92
2166 4702 3.152341 AGAGTGCCTCACAAAAAGGATG 58.848 45.455 5.21 0.00 36.74 3.51
2167 4703 3.515602 AGAGTGCCTCACAAAAAGGAT 57.484 42.857 5.21 0.00 36.74 3.24
2168 4704 2.951642 CAAGAGTGCCTCACAAAAAGGA 59.048 45.455 5.21 0.00 36.74 3.36
2169 4705 2.689983 ACAAGAGTGCCTCACAAAAAGG 59.310 45.455 5.21 0.00 36.74 3.11
2170 4706 3.629398 AGACAAGAGTGCCTCACAAAAAG 59.371 43.478 5.21 0.00 36.74 2.27
2171 4707 3.620488 AGACAAGAGTGCCTCACAAAAA 58.380 40.909 5.21 0.00 36.74 1.94
2172 4708 3.206150 GAGACAAGAGTGCCTCACAAAA 58.794 45.455 5.21 0.00 36.74 2.44
2173 4709 2.803133 CGAGACAAGAGTGCCTCACAAA 60.803 50.000 5.21 0.00 36.74 2.83
2174 4710 1.269778 CGAGACAAGAGTGCCTCACAA 60.270 52.381 5.21 0.00 36.74 3.33
2175 4711 0.315251 CGAGACAAGAGTGCCTCACA 59.685 55.000 5.21 0.00 36.74 3.58
2176 4712 0.598562 TCGAGACAAGAGTGCCTCAC 59.401 55.000 5.21 0.00 32.06 3.51
2177 4713 0.884514 CTCGAGACAAGAGTGCCTCA 59.115 55.000 6.58 0.00 32.06 3.86
2178 4714 1.169577 TCTCGAGACAAGAGTGCCTC 58.830 55.000 12.08 0.00 37.07 4.70
2179 4715 1.846007 ATCTCGAGACAAGAGTGCCT 58.154 50.000 19.30 0.00 37.07 4.75
2180 4716 2.165437 AGAATCTCGAGACAAGAGTGCC 59.835 50.000 19.30 0.00 37.07 5.01
2181 4717 3.502191 AGAATCTCGAGACAAGAGTGC 57.498 47.619 19.30 0.00 37.07 4.40
2182 4718 5.336744 GGTTAGAATCTCGAGACAAGAGTG 58.663 45.833 19.30 0.00 37.07 3.51
2183 4719 4.399934 GGGTTAGAATCTCGAGACAAGAGT 59.600 45.833 19.30 0.00 37.07 3.24
2184 4720 4.642885 AGGGTTAGAATCTCGAGACAAGAG 59.357 45.833 19.30 0.00 37.09 2.85
2185 4721 4.601084 AGGGTTAGAATCTCGAGACAAGA 58.399 43.478 19.30 0.63 0.00 3.02
2186 4722 4.993029 AGGGTTAGAATCTCGAGACAAG 57.007 45.455 19.30 0.00 0.00 3.16
2187 4723 6.127101 TGATAGGGTTAGAATCTCGAGACAA 58.873 40.000 19.30 6.88 0.00 3.18
2188 4724 5.691896 TGATAGGGTTAGAATCTCGAGACA 58.308 41.667 19.30 3.21 0.00 3.41
2189 4725 6.827586 ATGATAGGGTTAGAATCTCGAGAC 57.172 41.667 19.30 6.06 0.00 3.36
2190 4726 7.459234 TGTATGATAGGGTTAGAATCTCGAGA 58.541 38.462 19.19 19.19 0.00 4.04
2191 4727 7.689446 TGTATGATAGGGTTAGAATCTCGAG 57.311 40.000 5.93 5.93 0.00 4.04
2192 4728 8.473358 TTTGTATGATAGGGTTAGAATCTCGA 57.527 34.615 0.00 0.00 0.00 4.04
2193 4729 9.197694 CTTTTGTATGATAGGGTTAGAATCTCG 57.802 37.037 0.00 0.00 0.00 4.04
2194 4730 8.994170 GCTTTTGTATGATAGGGTTAGAATCTC 58.006 37.037 0.00 0.00 0.00 2.75
2195 4731 7.939588 GGCTTTTGTATGATAGGGTTAGAATCT 59.060 37.037 0.00 0.00 0.00 2.40
2196 4732 7.939588 AGGCTTTTGTATGATAGGGTTAGAATC 59.060 37.037 0.00 0.00 0.00 2.52
2197 4733 7.816411 AGGCTTTTGTATGATAGGGTTAGAAT 58.184 34.615 0.00 0.00 0.00 2.40
2198 4734 7.208064 AGGCTTTTGTATGATAGGGTTAGAA 57.792 36.000 0.00 0.00 0.00 2.10
2199 4735 6.824958 AGGCTTTTGTATGATAGGGTTAGA 57.175 37.500 0.00 0.00 0.00 2.10
2200 4736 7.736893 AGTAGGCTTTTGTATGATAGGGTTAG 58.263 38.462 0.00 0.00 0.00 2.34
2201 4737 7.685849 AGTAGGCTTTTGTATGATAGGGTTA 57.314 36.000 0.00 0.00 0.00 2.85
2202 4738 6.576778 AGTAGGCTTTTGTATGATAGGGTT 57.423 37.500 0.00 0.00 0.00 4.11
2203 4739 6.576778 AAGTAGGCTTTTGTATGATAGGGT 57.423 37.500 0.00 0.00 0.00 4.34
2216 4752 4.901868 TGTATGTCGGAAAAGTAGGCTTT 58.098 39.130 0.00 0.00 46.01 3.51
2217 4753 4.546829 TGTATGTCGGAAAAGTAGGCTT 57.453 40.909 0.00 0.00 36.30 4.35
2218 4754 4.546829 TTGTATGTCGGAAAAGTAGGCT 57.453 40.909 0.00 0.00 0.00 4.58
2219 4755 5.813080 ATTTGTATGTCGGAAAAGTAGGC 57.187 39.130 0.00 0.00 0.00 3.93
2220 4756 6.259387 GGGTATTTGTATGTCGGAAAAGTAGG 59.741 42.308 0.00 0.00 0.00 3.18
2221 4757 6.819649 TGGGTATTTGTATGTCGGAAAAGTAG 59.180 38.462 0.00 0.00 0.00 2.57
2222 4758 6.709281 TGGGTATTTGTATGTCGGAAAAGTA 58.291 36.000 0.00 0.00 0.00 2.24
2223 4759 5.562635 TGGGTATTTGTATGTCGGAAAAGT 58.437 37.500 0.00 0.00 0.00 2.66
2224 4760 6.503589 TTGGGTATTTGTATGTCGGAAAAG 57.496 37.500 0.00 0.00 0.00 2.27
2225 4761 6.896021 TTTGGGTATTTGTATGTCGGAAAA 57.104 33.333 0.00 0.00 0.00 2.29
2226 4762 6.626181 GCATTTGGGTATTTGTATGTCGGAAA 60.626 38.462 0.00 0.00 0.00 3.13
2227 4763 5.163602 GCATTTGGGTATTTGTATGTCGGAA 60.164 40.000 0.00 0.00 0.00 4.30
2228 4764 4.336993 GCATTTGGGTATTTGTATGTCGGA 59.663 41.667 0.00 0.00 0.00 4.55
2229 4765 4.338118 AGCATTTGGGTATTTGTATGTCGG 59.662 41.667 0.00 0.00 0.00 4.79
2230 4766 5.499139 AGCATTTGGGTATTTGTATGTCG 57.501 39.130 0.00 0.00 0.00 4.35
2231 4767 6.918022 GCTAAGCATTTGGGTATTTGTATGTC 59.082 38.462 0.00 0.00 0.00 3.06
2232 4768 6.183360 GGCTAAGCATTTGGGTATTTGTATGT 60.183 38.462 0.00 0.00 0.00 2.29
2233 4769 6.215845 GGCTAAGCATTTGGGTATTTGTATG 58.784 40.000 0.00 0.00 0.00 2.39
2234 4770 5.304357 GGGCTAAGCATTTGGGTATTTGTAT 59.696 40.000 0.00 0.00 0.00 2.29
2235 4771 4.647399 GGGCTAAGCATTTGGGTATTTGTA 59.353 41.667 0.00 0.00 0.00 2.41
2236 4772 3.450817 GGGCTAAGCATTTGGGTATTTGT 59.549 43.478 0.00 0.00 0.00 2.83
2237 4773 3.181466 GGGGCTAAGCATTTGGGTATTTG 60.181 47.826 0.00 0.00 0.00 2.32
2238 4774 3.038280 GGGGCTAAGCATTTGGGTATTT 58.962 45.455 0.00 0.00 0.00 1.40
2239 4775 2.677914 GGGGCTAAGCATTTGGGTATT 58.322 47.619 0.00 0.00 0.00 1.89
2240 4776 1.133167 GGGGGCTAAGCATTTGGGTAT 60.133 52.381 0.00 0.00 0.00 2.73
2241 4777 0.260523 GGGGGCTAAGCATTTGGGTA 59.739 55.000 0.00 0.00 0.00 3.69
2242 4778 1.001631 GGGGGCTAAGCATTTGGGT 59.998 57.895 0.00 0.00 0.00 4.51
2243 4779 1.001503 TGGGGGCTAAGCATTTGGG 59.998 57.895 0.00 0.00 0.00 4.12
2244 4780 1.666209 CGTGGGGGCTAAGCATTTGG 61.666 60.000 0.00 0.00 0.00 3.28
2245 4781 0.679640 TCGTGGGGGCTAAGCATTTG 60.680 55.000 0.00 0.00 0.00 2.32
2246 4782 0.039035 TTCGTGGGGGCTAAGCATTT 59.961 50.000 0.00 0.00 0.00 2.32
2247 4783 0.394352 CTTCGTGGGGGCTAAGCATT 60.394 55.000 0.00 0.00 0.00 3.56
2248 4784 1.224592 CTTCGTGGGGGCTAAGCAT 59.775 57.895 0.00 0.00 0.00 3.79
2249 4785 1.916273 TCTTCGTGGGGGCTAAGCA 60.916 57.895 0.00 0.00 0.00 3.91
2250 4786 1.449778 GTCTTCGTGGGGGCTAAGC 60.450 63.158 0.00 0.00 0.00 3.09
2251 4787 1.221021 GGTCTTCGTGGGGGCTAAG 59.779 63.158 0.00 0.00 0.00 2.18
2252 4788 2.295602 GGGTCTTCGTGGGGGCTAA 61.296 63.158 0.00 0.00 0.00 3.09
2253 4789 2.686106 GGGTCTTCGTGGGGGCTA 60.686 66.667 0.00 0.00 0.00 3.93
2254 4790 4.974438 TGGGTCTTCGTGGGGGCT 62.974 66.667 0.00 0.00 0.00 5.19
2255 4791 3.961414 TTGGGTCTTCGTGGGGGC 61.961 66.667 0.00 0.00 0.00 5.80
2256 4792 2.033602 GTTGGGTCTTCGTGGGGG 59.966 66.667 0.00 0.00 0.00 5.40
2257 4793 2.358247 CGTTGGGTCTTCGTGGGG 60.358 66.667 0.00 0.00 0.00 4.96
2258 4794 2.358247 CCGTTGGGTCTTCGTGGG 60.358 66.667 0.00 0.00 0.00 4.61
2259 4795 2.424302 ACCGTTGGGTCTTCGTGG 59.576 61.111 0.00 0.00 46.01 4.94
2270 4806 3.573489 GAAACGCAGCCGACCGTTG 62.573 63.158 0.00 0.00 45.75 4.10
2272 4808 4.595538 TGAAACGCAGCCGACCGT 62.596 61.111 0.00 0.00 39.70 4.83
2273 4809 3.777925 CTGAAACGCAGCCGACCG 61.778 66.667 0.00 0.00 37.90 4.79
2274 4810 1.298859 AATCTGAAACGCAGCCGACC 61.299 55.000 0.00 0.00 44.52 4.79
2275 4811 0.095417 GAATCTGAAACGCAGCCGAC 59.905 55.000 0.00 0.00 44.52 4.79
2276 4812 0.037326 AGAATCTGAAACGCAGCCGA 60.037 50.000 0.00 0.00 44.52 5.54
2277 4813 0.371645 GAGAATCTGAAACGCAGCCG 59.628 55.000 0.00 0.00 44.52 5.52
2278 4814 0.371645 CGAGAATCTGAAACGCAGCC 59.628 55.000 0.00 0.00 44.52 4.85
2279 4815 1.350193 TCGAGAATCTGAAACGCAGC 58.650 50.000 0.00 0.00 44.52 5.25
2280 4816 3.733224 CCTATCGAGAATCTGAAACGCAG 59.267 47.826 0.00 0.00 46.31 5.18
2281 4817 3.380320 TCCTATCGAGAATCTGAAACGCA 59.620 43.478 0.00 0.00 0.00 5.24
2282 4818 3.731717 GTCCTATCGAGAATCTGAAACGC 59.268 47.826 0.00 0.00 0.00 4.84
2283 4819 4.921547 TGTCCTATCGAGAATCTGAAACG 58.078 43.478 0.00 0.00 0.00 3.60
2284 4820 6.758886 ACATTGTCCTATCGAGAATCTGAAAC 59.241 38.462 0.00 0.00 32.29 2.78
2285 4821 6.878317 ACATTGTCCTATCGAGAATCTGAAA 58.122 36.000 0.00 0.00 32.29 2.69
2286 4822 6.096846 TGACATTGTCCTATCGAGAATCTGAA 59.903 38.462 14.05 0.00 32.29 3.02
2287 4823 5.594317 TGACATTGTCCTATCGAGAATCTGA 59.406 40.000 14.05 0.00 32.29 3.27
2288 4824 5.689514 GTGACATTGTCCTATCGAGAATCTG 59.310 44.000 14.05 0.00 32.29 2.90
2289 4825 5.360999 TGTGACATTGTCCTATCGAGAATCT 59.639 40.000 14.05 0.00 32.29 2.40
2290 4826 5.592054 TGTGACATTGTCCTATCGAGAATC 58.408 41.667 14.05 0.00 32.29 2.52
2291 4827 5.598416 TGTGACATTGTCCTATCGAGAAT 57.402 39.130 14.05 0.00 34.89 2.40
2292 4828 5.105351 ACATGTGACATTGTCCTATCGAGAA 60.105 40.000 14.05 0.00 0.00 2.87
2293 4829 4.402474 ACATGTGACATTGTCCTATCGAGA 59.598 41.667 14.05 0.00 0.00 4.04
2294 4830 4.686972 ACATGTGACATTGTCCTATCGAG 58.313 43.478 14.05 1.22 0.00 4.04
2295 4831 4.736126 ACATGTGACATTGTCCTATCGA 57.264 40.909 14.05 0.00 0.00 3.59
2296 4832 4.869861 TCAACATGTGACATTGTCCTATCG 59.130 41.667 14.05 2.24 0.00 2.92
2297 4833 6.722301 CATCAACATGTGACATTGTCCTATC 58.278 40.000 14.05 3.51 39.72 2.08
2298 4834 5.066893 GCATCAACATGTGACATTGTCCTAT 59.933 40.000 14.05 5.81 39.72 2.57
2299 4835 4.395854 GCATCAACATGTGACATTGTCCTA 59.604 41.667 14.05 3.68 39.72 2.94
2300 4836 3.192001 GCATCAACATGTGACATTGTCCT 59.808 43.478 14.05 0.00 39.72 3.85
2301 4837 3.192001 AGCATCAACATGTGACATTGTCC 59.808 43.478 14.05 6.37 39.72 4.02
2302 4838 4.430137 AGCATCAACATGTGACATTGTC 57.570 40.909 9.93 9.93 39.72 3.18
2303 4839 4.859304 AAGCATCAACATGTGACATTGT 57.141 36.364 0.00 0.00 39.72 2.71
2304 4840 4.986034 ACAAAGCATCAACATGTGACATTG 59.014 37.500 0.00 0.00 39.72 2.82
2305 4841 5.204409 ACAAAGCATCAACATGTGACATT 57.796 34.783 0.00 0.00 39.72 2.71
2306 4842 4.859304 ACAAAGCATCAACATGTGACAT 57.141 36.364 0.00 0.00 39.72 3.06
2307 4843 4.142204 ACAACAAAGCATCAACATGTGACA 60.142 37.500 0.00 0.00 39.72 3.58
2308 4844 4.362279 ACAACAAAGCATCAACATGTGAC 58.638 39.130 0.00 0.00 39.72 3.67
2309 4845 4.652421 ACAACAAAGCATCAACATGTGA 57.348 36.364 0.00 0.00 41.67 3.58
2310 4846 4.567558 ACAACAACAAAGCATCAACATGTG 59.432 37.500 0.00 0.00 31.86 3.21
2311 4847 4.757594 ACAACAACAAAGCATCAACATGT 58.242 34.783 0.00 0.00 31.86 3.21
2312 4848 5.291371 TCAACAACAACAAAGCATCAACATG 59.709 36.000 0.00 0.00 0.00 3.21
2313 4849 5.417811 TCAACAACAACAAAGCATCAACAT 58.582 33.333 0.00 0.00 0.00 2.71
2314 4850 4.814147 TCAACAACAACAAAGCATCAACA 58.186 34.783 0.00 0.00 0.00 3.33
2315 4851 5.776519 TTCAACAACAACAAAGCATCAAC 57.223 34.783 0.00 0.00 0.00 3.18
2316 4852 6.203530 TGTTTTCAACAACAACAAAGCATCAA 59.796 30.769 0.00 0.00 38.72 2.57
2317 4853 5.698089 TGTTTTCAACAACAACAAAGCATCA 59.302 32.000 0.00 0.00 38.72 3.07
2318 4854 6.163159 TGTTTTCAACAACAACAAAGCATC 57.837 33.333 0.00 0.00 38.72 3.91
2319 4855 6.740411 ATGTTTTCAACAACAACAAAGCAT 57.260 29.167 0.00 0.00 45.86 3.79
2320 4856 7.547019 TCATATGTTTTCAACAACAACAAAGCA 59.453 29.630 1.90 0.00 45.86 3.91
2321 4857 7.904094 TCATATGTTTTCAACAACAACAAAGC 58.096 30.769 1.90 0.00 45.86 3.51
2330 4866 9.611284 CGAGAGAAATTCATATGTTTTCAACAA 57.389 29.630 23.41 4.79 45.86 2.83
2331 4867 8.783093 ACGAGAGAAATTCATATGTTTTCAACA 58.217 29.630 23.41 0.00 46.94 3.33
2332 4868 9.612620 AACGAGAGAAATTCATATGTTTTCAAC 57.387 29.630 23.41 18.77 32.94 3.18
2334 4870 9.825972 GAAACGAGAGAAATTCATATGTTTTCA 57.174 29.630 23.41 0.00 32.94 2.69
2335 4871 8.989767 CGAAACGAGAGAAATTCATATGTTTTC 58.010 33.333 18.24 18.24 0.00 2.29
2336 4872 7.962918 CCGAAACGAGAGAAATTCATATGTTTT 59.037 33.333 1.90 4.54 0.00 2.43
2337 4873 7.333423 TCCGAAACGAGAGAAATTCATATGTTT 59.667 33.333 1.90 1.40 0.00 2.83
2338 4874 6.816640 TCCGAAACGAGAGAAATTCATATGTT 59.183 34.615 1.90 0.00 0.00 2.71
2339 4875 6.338146 TCCGAAACGAGAGAAATTCATATGT 58.662 36.000 1.90 0.00 0.00 2.29
2340 4876 6.828502 TCCGAAACGAGAGAAATTCATATG 57.171 37.500 0.00 0.00 0.00 1.78
2341 4877 7.437748 AGATCCGAAACGAGAGAAATTCATAT 58.562 34.615 0.00 0.00 0.00 1.78
2342 4878 6.806751 AGATCCGAAACGAGAGAAATTCATA 58.193 36.000 0.00 0.00 0.00 2.15
2343 4879 5.665459 AGATCCGAAACGAGAGAAATTCAT 58.335 37.500 0.00 0.00 0.00 2.57
2344 4880 5.073311 AGATCCGAAACGAGAGAAATTCA 57.927 39.130 0.00 0.00 0.00 2.57
2345 4881 4.504826 GGAGATCCGAAACGAGAGAAATTC 59.495 45.833 0.00 0.00 0.00 2.17
2346 4882 4.434520 GGAGATCCGAAACGAGAGAAATT 58.565 43.478 0.00 0.00 0.00 1.82
2347 4883 3.181474 GGGAGATCCGAAACGAGAGAAAT 60.181 47.826 0.00 0.00 36.71 2.17
2348 4884 2.165845 GGGAGATCCGAAACGAGAGAAA 59.834 50.000 0.00 0.00 36.71 2.52
2349 4885 1.749634 GGGAGATCCGAAACGAGAGAA 59.250 52.381 0.00 0.00 36.71 2.87
2350 4886 1.340697 TGGGAGATCCGAAACGAGAGA 60.341 52.381 0.00 0.00 38.76 3.10
2351 4887 1.103803 TGGGAGATCCGAAACGAGAG 58.896 55.000 0.00 0.00 38.76 3.20
2352 4888 0.815734 GTGGGAGATCCGAAACGAGA 59.184 55.000 0.00 0.00 38.76 4.04
2353 4889 0.179108 GGTGGGAGATCCGAAACGAG 60.179 60.000 0.00 0.00 38.76 4.18
2354 4890 0.901114 TGGTGGGAGATCCGAAACGA 60.901 55.000 0.00 0.00 38.76 3.85
2355 4891 0.036765 TTGGTGGGAGATCCGAAACG 60.037 55.000 0.00 0.00 38.76 3.60
2356 4892 1.810755 GTTTGGTGGGAGATCCGAAAC 59.189 52.381 0.00 0.00 38.76 2.78
2357 4893 1.702957 AGTTTGGTGGGAGATCCGAAA 59.297 47.619 0.00 0.00 38.76 3.46
2358 4894 1.003118 CAGTTTGGTGGGAGATCCGAA 59.997 52.381 0.00 0.00 38.76 4.30
2359 4895 0.613260 CAGTTTGGTGGGAGATCCGA 59.387 55.000 0.00 0.00 38.76 4.55
2360 4896 0.613260 TCAGTTTGGTGGGAGATCCG 59.387 55.000 0.00 0.00 38.76 4.18
2361 4897 1.351017 TGTCAGTTTGGTGGGAGATCC 59.649 52.381 0.00 0.00 0.00 3.36
2362 4898 2.859165 TGTCAGTTTGGTGGGAGATC 57.141 50.000 0.00 0.00 0.00 2.75
2363 4899 2.291153 CCATGTCAGTTTGGTGGGAGAT 60.291 50.000 0.00 0.00 0.00 2.75
2364 4900 1.073763 CCATGTCAGTTTGGTGGGAGA 59.926 52.381 0.00 0.00 0.00 3.71
2365 4901 1.202927 ACCATGTCAGTTTGGTGGGAG 60.203 52.381 0.00 0.00 44.49 4.30
2366 4902 0.850100 ACCATGTCAGTTTGGTGGGA 59.150 50.000 0.00 0.00 44.49 4.37
2367 4903 2.577606 TACCATGTCAGTTTGGTGGG 57.422 50.000 6.83 0.00 45.68 4.61
2368 4904 3.750371 TCTTACCATGTCAGTTTGGTGG 58.250 45.455 6.83 0.00 45.68 4.61
2369 4905 4.641396 TCTCTTACCATGTCAGTTTGGTG 58.359 43.478 6.83 0.00 45.68 4.17
2371 4907 3.686726 GCTCTCTTACCATGTCAGTTTGG 59.313 47.826 0.00 0.00 39.02 3.28
2372 4908 3.686726 GGCTCTCTTACCATGTCAGTTTG 59.313 47.826 0.00 0.00 0.00 2.93
2373 4909 3.307762 GGGCTCTCTTACCATGTCAGTTT 60.308 47.826 0.00 0.00 0.00 2.66
2374 4910 2.237392 GGGCTCTCTTACCATGTCAGTT 59.763 50.000 0.00 0.00 0.00 3.16
2375 4911 1.834263 GGGCTCTCTTACCATGTCAGT 59.166 52.381 0.00 0.00 0.00 3.41
2376 4912 1.833630 TGGGCTCTCTTACCATGTCAG 59.166 52.381 0.00 0.00 0.00 3.51
2377 4913 1.555075 GTGGGCTCTCTTACCATGTCA 59.445 52.381 0.00 0.00 36.54 3.58
2378 4914 1.471676 CGTGGGCTCTCTTACCATGTC 60.472 57.143 0.00 0.00 36.70 3.06
2379 4915 0.537188 CGTGGGCTCTCTTACCATGT 59.463 55.000 0.00 0.00 36.70 3.21
2380 4916 0.179073 CCGTGGGCTCTCTTACCATG 60.179 60.000 0.00 0.00 40.23 3.66
2381 4917 1.972660 GCCGTGGGCTCTCTTACCAT 61.973 60.000 0.00 0.00 46.69 3.55
2382 4918 2.656069 GCCGTGGGCTCTCTTACCA 61.656 63.158 0.00 0.00 46.69 3.25
2383 4919 2.187163 GCCGTGGGCTCTCTTACC 59.813 66.667 0.00 0.00 46.69 2.85
2395 4931 1.745232 TAATAGCCACCAAAGCCGTG 58.255 50.000 0.00 0.00 0.00 4.94
2396 4932 2.297701 CATAATAGCCACCAAAGCCGT 58.702 47.619 0.00 0.00 0.00 5.68
2397 4933 1.608590 CCATAATAGCCACCAAAGCCG 59.391 52.381 0.00 0.00 0.00 5.52
2398 4934 1.963515 CCCATAATAGCCACCAAAGCC 59.036 52.381 0.00 0.00 0.00 4.35
2399 4935 1.341209 GCCCATAATAGCCACCAAAGC 59.659 52.381 0.00 0.00 0.00 3.51
2400 4936 2.665165 TGCCCATAATAGCCACCAAAG 58.335 47.619 0.00 0.00 0.00 2.77
2401 4937 2.836636 TGCCCATAATAGCCACCAAA 57.163 45.000 0.00 0.00 0.00 3.28
2402 4938 2.176581 TCATGCCCATAATAGCCACCAA 59.823 45.455 0.00 0.00 0.00 3.67
2403 4939 1.779700 TCATGCCCATAATAGCCACCA 59.220 47.619 0.00 0.00 0.00 4.17
2404 4940 2.162681 GTCATGCCCATAATAGCCACC 58.837 52.381 0.00 0.00 0.00 4.61
2405 4941 1.806542 CGTCATGCCCATAATAGCCAC 59.193 52.381 0.00 0.00 0.00 5.01
2406 4942 1.271325 CCGTCATGCCCATAATAGCCA 60.271 52.381 0.00 0.00 0.00 4.75
2407 4943 1.003118 TCCGTCATGCCCATAATAGCC 59.997 52.381 0.00 0.00 0.00 3.93
2408 4944 2.028112 TCTCCGTCATGCCCATAATAGC 60.028 50.000 0.00 0.00 0.00 2.97
2409 4945 3.961480 TCTCCGTCATGCCCATAATAG 57.039 47.619 0.00 0.00 0.00 1.73
2410 4946 3.901222 TCTTCTCCGTCATGCCCATAATA 59.099 43.478 0.00 0.00 0.00 0.98
2411 4947 2.705658 TCTTCTCCGTCATGCCCATAAT 59.294 45.455 0.00 0.00 0.00 1.28
2412 4948 2.115427 TCTTCTCCGTCATGCCCATAA 58.885 47.619 0.00 0.00 0.00 1.90
2413 4949 1.788229 TCTTCTCCGTCATGCCCATA 58.212 50.000 0.00 0.00 0.00 2.74
2414 4950 1.135094 ATCTTCTCCGTCATGCCCAT 58.865 50.000 0.00 0.00 0.00 4.00
2415 4951 0.178767 CATCTTCTCCGTCATGCCCA 59.821 55.000 0.00 0.00 0.00 5.36
2416 4952 0.465705 TCATCTTCTCCGTCATGCCC 59.534 55.000 0.00 0.00 0.00 5.36
2417 4953 2.411904 GATCATCTTCTCCGTCATGCC 58.588 52.381 0.00 0.00 0.00 4.40
2418 4954 2.411904 GGATCATCTTCTCCGTCATGC 58.588 52.381 0.00 0.00 0.00 4.06
2419 4955 2.366590 TGGGATCATCTTCTCCGTCATG 59.633 50.000 0.00 0.00 31.95 3.07
2420 4956 2.366916 GTGGGATCATCTTCTCCGTCAT 59.633 50.000 0.00 0.00 31.95 3.06
2421 4957 1.757118 GTGGGATCATCTTCTCCGTCA 59.243 52.381 0.00 0.00 31.95 4.35
2422 4958 1.069358 GGTGGGATCATCTTCTCCGTC 59.931 57.143 0.00 0.00 31.95 4.79
2423 4959 1.123928 GGTGGGATCATCTTCTCCGT 58.876 55.000 0.00 0.00 31.95 4.69
2424 4960 1.123077 TGGTGGGATCATCTTCTCCG 58.877 55.000 0.00 0.00 31.95 4.63
2425 4961 2.158696 CCTTGGTGGGATCATCTTCTCC 60.159 54.545 0.00 0.00 0.00 3.71
2426 4962 2.774234 TCCTTGGTGGGATCATCTTCTC 59.226 50.000 0.00 0.00 36.20 2.87
2427 4963 2.850833 TCCTTGGTGGGATCATCTTCT 58.149 47.619 0.00 0.00 36.20 2.85
2428 4964 3.872459 ATCCTTGGTGGGATCATCTTC 57.128 47.619 0.00 0.00 41.84 2.87
2429 4965 5.732331 TTTATCCTTGGTGGGATCATCTT 57.268 39.130 0.00 0.00 44.17 2.40
2430 4966 5.135020 ACATTTATCCTTGGTGGGATCATCT 59.865 40.000 0.00 0.00 44.17 2.90
2431 4967 5.388654 ACATTTATCCTTGGTGGGATCATC 58.611 41.667 0.00 0.00 44.17 2.92
2432 4968 5.103558 TGACATTTATCCTTGGTGGGATCAT 60.104 40.000 0.00 0.00 44.17 2.45
2433 4969 4.229353 TGACATTTATCCTTGGTGGGATCA 59.771 41.667 0.00 0.00 44.17 2.92
2434 4970 4.792068 TGACATTTATCCTTGGTGGGATC 58.208 43.478 0.00 0.00 44.17 3.36
2435 4971 4.879295 TGACATTTATCCTTGGTGGGAT 57.121 40.909 0.00 0.00 46.60 3.85
2436 4972 4.879295 ATGACATTTATCCTTGGTGGGA 57.121 40.909 0.00 0.00 39.95 4.37
2437 4973 4.955450 TCAATGACATTTATCCTTGGTGGG 59.045 41.667 0.00 0.00 36.20 4.61
2438 4974 6.153340 ACTTCAATGACATTTATCCTTGGTGG 59.847 38.462 0.00 0.00 37.10 4.61
2439 4975 7.161773 ACTTCAATGACATTTATCCTTGGTG 57.838 36.000 0.00 0.00 0.00 4.17
2440 4976 7.605449 CAACTTCAATGACATTTATCCTTGGT 58.395 34.615 0.00 0.00 0.00 3.67
2441 4977 6.532657 GCAACTTCAATGACATTTATCCTTGG 59.467 38.462 0.00 0.00 0.00 3.61
2442 4978 7.318141 AGCAACTTCAATGACATTTATCCTTG 58.682 34.615 0.00 0.00 0.00 3.61
2443 4979 7.395489 AGAGCAACTTCAATGACATTTATCCTT 59.605 33.333 0.00 0.00 0.00 3.36
2444 4980 6.888632 AGAGCAACTTCAATGACATTTATCCT 59.111 34.615 0.00 0.00 0.00 3.24
2445 4981 7.093322 AGAGCAACTTCAATGACATTTATCC 57.907 36.000 0.00 0.00 0.00 2.59
2446 4982 8.668353 TGTAGAGCAACTTCAATGACATTTATC 58.332 33.333 0.00 0.00 0.00 1.75
2447 4983 8.565896 TGTAGAGCAACTTCAATGACATTTAT 57.434 30.769 0.00 0.00 0.00 1.40
2448 4984 7.977789 TGTAGAGCAACTTCAATGACATTTA 57.022 32.000 0.00 0.00 0.00 1.40
2449 4985 6.882610 TGTAGAGCAACTTCAATGACATTT 57.117 33.333 0.00 0.00 0.00 2.32
2450 4986 6.127814 CCATGTAGAGCAACTTCAATGACATT 60.128 38.462 0.00 0.00 30.30 2.71
2451 4987 5.356190 CCATGTAGAGCAACTTCAATGACAT 59.644 40.000 0.00 0.00 30.30 3.06
2452 4988 4.696877 CCATGTAGAGCAACTTCAATGACA 59.303 41.667 0.00 0.00 30.30 3.58
2453 4989 4.937620 TCCATGTAGAGCAACTTCAATGAC 59.062 41.667 0.00 0.00 30.30 3.06
2454 4990 5.164620 TCCATGTAGAGCAACTTCAATGA 57.835 39.130 0.00 0.00 30.30 2.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.