Multiple sequence alignment - TraesCS4D01G174400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G174400 chr4D 100.000 2570 0 0 1 2570 302398112 302400681 0.000000e+00 4747
1 TraesCS4D01G174400 chr4D 95.755 424 16 2 1 422 450708549 450708126 0.000000e+00 682
2 TraesCS4D01G174400 chr4A 89.238 2230 111 69 422 2565 177618520 177616334 0.000000e+00 2669
3 TraesCS4D01G174400 chr4B 91.916 1138 40 19 881 1973 377374572 377375702 0.000000e+00 1544
4 TraesCS4D01G174400 chr4B 89.899 495 30 7 2080 2560 377376035 377376523 1.010000e-173 619
5 TraesCS4D01G174400 chr4B 87.582 153 7 4 677 823 377373533 377373679 1.580000e-37 167
6 TraesCS4D01G174400 chr2D 96.927 423 13 0 1 423 413349937 413349515 0.000000e+00 710
7 TraesCS4D01G174400 chr2D 95.981 423 15 2 1 422 58986032 58986453 0.000000e+00 686
8 TraesCS4D01G174400 chr2D 81.644 523 85 5 1045 1560 55764783 55764265 8.500000e-115 424
9 TraesCS4D01G174400 chr2B 96.454 423 14 1 1 422 733080253 733080675 0.000000e+00 697
10 TraesCS4D01G174400 chr2B 81.836 523 84 7 1045 1560 88434970 88434452 1.830000e-116 429
11 TraesCS4D01G174400 chr6D 96.226 424 14 2 1 422 16691024 16690601 0.000000e+00 693
12 TraesCS4D01G174400 chr6D 96.019 427 15 1 1 425 54548428 54548854 0.000000e+00 693
13 TraesCS4D01G174400 chr7D 95.991 424 15 2 1 422 231336705 231336282 0.000000e+00 688
14 TraesCS4D01G174400 chr7D 95.991 424 15 2 1 422 364107362 364107785 0.000000e+00 688
15 TraesCS4D01G174400 chr5D 95.755 424 16 2 1 422 555439063 555438640 0.000000e+00 682
16 TraesCS4D01G174400 chr2A 82.027 523 83 5 1045 1560 57176236 57175718 3.930000e-118 435


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G174400 chr4D 302398112 302400681 2569 False 4747.000000 4747 100.000 1 2570 1 chr4D.!!$F1 2569
1 TraesCS4D01G174400 chr4A 177616334 177618520 2186 True 2669.000000 2669 89.238 422 2565 1 chr4A.!!$R1 2143
2 TraesCS4D01G174400 chr4B 377373533 377376523 2990 False 776.666667 1544 89.799 677 2560 3 chr4B.!!$F1 1883
3 TraesCS4D01G174400 chr2D 55764265 55764783 518 True 424.000000 424 81.644 1045 1560 1 chr2D.!!$R1 515
4 TraesCS4D01G174400 chr2B 88434452 88434970 518 True 429.000000 429 81.836 1045 1560 1 chr2B.!!$R1 515
5 TraesCS4D01G174400 chr2A 57175718 57176236 518 True 435.000000 435 82.027 1045 1560 1 chr2A.!!$R1 515

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
350 351 0.034059 CTAGTTATGCAGAGGCCGGG 59.966 60.0 2.18 0.0 40.13 5.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1988 2953 0.036732 GGTGCATGTTGTCTCCCTGA 59.963 55.0 0.0 0.0 0.0 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 2.838736 ACTATGGTCGCTTTGGCTATG 58.161 47.619 0.00 0.00 36.09 2.23
21 22 2.170607 ACTATGGTCGCTTTGGCTATGT 59.829 45.455 0.00 0.00 36.09 2.29
22 23 3.386726 ACTATGGTCGCTTTGGCTATGTA 59.613 43.478 0.00 0.00 36.09 2.29
23 24 2.309528 TGGTCGCTTTGGCTATGTAG 57.690 50.000 0.00 0.00 36.09 2.74
24 25 1.828595 TGGTCGCTTTGGCTATGTAGA 59.171 47.619 0.00 0.00 36.09 2.59
25 26 2.235155 TGGTCGCTTTGGCTATGTAGAA 59.765 45.455 0.00 0.00 36.09 2.10
26 27 3.267483 GGTCGCTTTGGCTATGTAGAAA 58.733 45.455 0.00 0.00 36.09 2.52
27 28 3.877508 GGTCGCTTTGGCTATGTAGAAAT 59.122 43.478 0.00 0.00 36.09 2.17
28 29 4.260784 GGTCGCTTTGGCTATGTAGAAATG 60.261 45.833 0.00 0.00 36.09 2.32
29 30 4.570772 GTCGCTTTGGCTATGTAGAAATGA 59.429 41.667 0.00 0.00 36.09 2.57
30 31 5.237344 GTCGCTTTGGCTATGTAGAAATGAT 59.763 40.000 0.00 0.00 36.09 2.45
31 32 5.822519 TCGCTTTGGCTATGTAGAAATGATT 59.177 36.000 0.00 0.00 36.09 2.57
32 33 6.318648 TCGCTTTGGCTATGTAGAAATGATTT 59.681 34.615 0.00 0.00 36.09 2.17
33 34 6.415867 CGCTTTGGCTATGTAGAAATGATTTG 59.584 38.462 0.00 0.00 36.09 2.32
34 35 6.698766 GCTTTGGCTATGTAGAAATGATTTGG 59.301 38.462 0.00 0.00 35.22 3.28
35 36 7.631377 GCTTTGGCTATGTAGAAATGATTTGGT 60.631 37.037 0.00 0.00 35.22 3.67
36 37 7.716799 TTGGCTATGTAGAAATGATTTGGTT 57.283 32.000 0.00 0.00 0.00 3.67
37 38 7.716799 TGGCTATGTAGAAATGATTTGGTTT 57.283 32.000 0.00 0.00 0.00 3.27
38 39 8.133024 TGGCTATGTAGAAATGATTTGGTTTT 57.867 30.769 0.00 0.00 0.00 2.43
39 40 8.250332 TGGCTATGTAGAAATGATTTGGTTTTC 58.750 33.333 0.00 0.00 0.00 2.29
40 41 8.250332 GGCTATGTAGAAATGATTTGGTTTTCA 58.750 33.333 0.00 0.00 32.94 2.69
41 42 9.638239 GCTATGTAGAAATGATTTGGTTTTCAA 57.362 29.630 0.00 0.00 32.94 2.69
53 54 9.153721 TGATTTGGTTTTCAATGATAGAAATGC 57.846 29.630 0.00 0.00 35.17 3.56
54 55 9.374838 GATTTGGTTTTCAATGATAGAAATGCT 57.625 29.630 0.00 0.00 35.17 3.79
55 56 9.729281 ATTTGGTTTTCAATGATAGAAATGCTT 57.271 25.926 0.00 0.00 35.17 3.91
56 57 8.761575 TTGGTTTTCAATGATAGAAATGCTTC 57.238 30.769 0.00 0.00 35.17 3.86
57 58 8.125978 TGGTTTTCAATGATAGAAATGCTTCT 57.874 30.769 0.00 0.00 44.37 2.85
58 59 8.246180 TGGTTTTCAATGATAGAAATGCTTCTC 58.754 33.333 0.00 0.00 41.19 2.87
59 60 7.704047 GGTTTTCAATGATAGAAATGCTTCTCC 59.296 37.037 0.00 0.00 41.19 3.71
60 61 8.465201 GTTTTCAATGATAGAAATGCTTCTCCT 58.535 33.333 0.00 0.00 41.19 3.69
61 62 8.585471 TTTCAATGATAGAAATGCTTCTCCTT 57.415 30.769 0.00 0.00 41.19 3.36
62 63 8.585471 TTCAATGATAGAAATGCTTCTCCTTT 57.415 30.769 0.00 0.00 41.19 3.11
63 64 7.993101 TCAATGATAGAAATGCTTCTCCTTTG 58.007 34.615 0.00 2.43 41.19 2.77
64 65 5.824904 TGATAGAAATGCTTCTCCTTTGC 57.175 39.130 0.00 0.00 41.19 3.68
65 66 5.255687 TGATAGAAATGCTTCTCCTTTGCA 58.744 37.500 0.00 0.00 41.19 4.08
66 67 5.356190 TGATAGAAATGCTTCTCCTTTGCAG 59.644 40.000 0.00 0.00 41.19 4.41
67 68 2.824341 AGAAATGCTTCTCCTTTGCAGG 59.176 45.455 0.00 0.00 37.31 4.85
68 69 2.299326 AATGCTTCTCCTTTGCAGGT 57.701 45.000 0.00 0.00 41.69 4.00
69 70 2.299326 ATGCTTCTCCTTTGCAGGTT 57.701 45.000 0.00 0.00 41.69 3.50
70 71 2.949177 TGCTTCTCCTTTGCAGGTTA 57.051 45.000 0.00 0.00 41.69 2.85
71 72 3.439857 TGCTTCTCCTTTGCAGGTTAT 57.560 42.857 0.00 0.00 41.69 1.89
72 73 3.766545 TGCTTCTCCTTTGCAGGTTATT 58.233 40.909 0.00 0.00 41.69 1.40
73 74 4.151883 TGCTTCTCCTTTGCAGGTTATTT 58.848 39.130 0.00 0.00 41.69 1.40
74 75 4.588528 TGCTTCTCCTTTGCAGGTTATTTT 59.411 37.500 0.00 0.00 41.69 1.82
75 76 5.164233 GCTTCTCCTTTGCAGGTTATTTTC 58.836 41.667 0.00 0.00 41.69 2.29
76 77 5.714047 CTTCTCCTTTGCAGGTTATTTTCC 58.286 41.667 0.00 0.00 41.69 3.13
77 78 3.756434 TCTCCTTTGCAGGTTATTTTCCG 59.244 43.478 0.00 0.00 41.69 4.30
78 79 3.492337 TCCTTTGCAGGTTATTTTCCGT 58.508 40.909 0.00 0.00 41.69 4.69
79 80 3.892588 TCCTTTGCAGGTTATTTTCCGTT 59.107 39.130 0.00 0.00 41.69 4.44
80 81 3.987220 CCTTTGCAGGTTATTTTCCGTTG 59.013 43.478 0.00 0.00 35.06 4.10
81 82 4.500716 CCTTTGCAGGTTATTTTCCGTTGT 60.501 41.667 0.00 0.00 35.06 3.32
82 83 5.278561 CCTTTGCAGGTTATTTTCCGTTGTA 60.279 40.000 0.00 0.00 35.06 2.41
83 84 4.752661 TGCAGGTTATTTTCCGTTGTAC 57.247 40.909 0.00 0.00 0.00 2.90
84 85 3.186817 TGCAGGTTATTTTCCGTTGTACG 59.813 43.478 0.00 0.00 42.11 3.67
85 86 3.739494 CAGGTTATTTTCCGTTGTACGC 58.261 45.455 0.00 0.00 40.91 4.42
86 87 3.186817 CAGGTTATTTTCCGTTGTACGCA 59.813 43.478 0.00 0.00 40.91 5.24
87 88 3.187022 AGGTTATTTTCCGTTGTACGCAC 59.813 43.478 0.00 0.00 40.91 5.34
88 89 3.187022 GGTTATTTTCCGTTGTACGCACT 59.813 43.478 0.00 0.00 40.91 4.40
89 90 4.388790 GTTATTTTCCGTTGTACGCACTC 58.611 43.478 0.00 0.00 40.91 3.51
90 91 0.854062 TTTTCCGTTGTACGCACTCG 59.146 50.000 0.00 0.00 40.91 4.18
91 92 1.550659 TTTCCGTTGTACGCACTCGC 61.551 55.000 0.00 0.00 40.91 5.03
92 93 2.410638 TTCCGTTGTACGCACTCGCT 62.411 55.000 0.00 0.00 40.91 4.93
93 94 2.019951 CCGTTGTACGCACTCGCTT 61.020 57.895 0.00 0.00 40.91 4.68
94 95 1.411089 CGTTGTACGCACTCGCTTC 59.589 57.895 0.00 0.00 39.84 3.86
95 96 1.411089 GTTGTACGCACTCGCTTCG 59.589 57.895 0.00 0.00 39.84 3.79
96 97 1.008194 TTGTACGCACTCGCTTCGT 60.008 52.632 0.00 0.00 39.84 3.85
97 98 0.238025 TTGTACGCACTCGCTTCGTA 59.762 50.000 0.00 0.00 39.84 3.43
98 99 4.751539 TACGCACTCGCTTCGTAC 57.248 55.556 0.00 0.00 39.84 3.67
99 100 1.225827 TACGCACTCGCTTCGTACG 60.226 57.895 9.53 9.53 39.84 3.67
100 101 1.900585 TACGCACTCGCTTCGTACGT 61.901 55.000 16.05 0.00 39.84 3.57
101 102 2.764925 CGCACTCGCTTCGTACGTG 61.765 63.158 16.05 10.61 35.30 4.49
102 103 2.434134 GCACTCGCTTCGTACGTGG 61.434 63.158 16.05 10.21 34.30 4.94
103 104 1.081641 CACTCGCTTCGTACGTGGT 60.082 57.895 16.05 3.79 0.00 4.16
104 105 1.063951 CACTCGCTTCGTACGTGGTC 61.064 60.000 16.05 2.61 0.00 4.02
105 106 1.233285 ACTCGCTTCGTACGTGGTCT 61.233 55.000 16.05 0.00 0.00 3.85
106 107 0.723414 CTCGCTTCGTACGTGGTCTA 59.277 55.000 16.05 0.00 0.00 2.59
107 108 0.443869 TCGCTTCGTACGTGGTCTAC 59.556 55.000 16.05 0.00 0.00 2.59
116 117 2.633639 CGTGGTCTACGCTACAACG 58.366 57.895 0.00 0.00 46.92 4.10
117 118 0.166597 CGTGGTCTACGCTACAACGA 59.833 55.000 6.48 0.00 45.17 3.85
118 119 1.789410 CGTGGTCTACGCTACAACGAG 60.789 57.143 6.48 0.00 45.17 4.18
119 120 1.198637 GTGGTCTACGCTACAACGAGT 59.801 52.381 0.00 0.00 36.70 4.18
120 121 1.198408 TGGTCTACGCTACAACGAGTG 59.802 52.381 0.00 0.00 36.70 3.51
121 122 1.467035 GGTCTACGCTACAACGAGTGG 60.467 57.143 0.00 0.00 36.70 4.00
122 123 1.466167 GTCTACGCTACAACGAGTGGA 59.534 52.381 0.00 0.00 36.70 4.02
123 124 1.736126 TCTACGCTACAACGAGTGGAG 59.264 52.381 0.00 0.00 41.79 3.86
124 125 1.467734 CTACGCTACAACGAGTGGAGT 59.532 52.381 9.58 9.58 43.58 3.85
125 126 1.527034 ACGCTACAACGAGTGGAGTA 58.473 50.000 5.24 0.00 39.77 2.59
126 127 1.198637 ACGCTACAACGAGTGGAGTAC 59.801 52.381 5.24 0.00 39.77 2.73
127 128 1.467035 CGCTACAACGAGTGGAGTACC 60.467 57.143 5.24 0.00 40.82 3.34
128 129 1.542915 GCTACAACGAGTGGAGTACCA 59.457 52.381 5.24 0.00 40.82 3.25
129 130 5.454498 CGCTACAACGAGTGGAGTACCAA 62.454 52.174 5.24 0.00 40.82 3.67
138 139 2.973694 TGGAGTACCAACCGCTATTC 57.026 50.000 0.00 0.00 43.91 1.75
139 140 2.181125 TGGAGTACCAACCGCTATTCA 58.819 47.619 0.00 0.00 43.91 2.57
140 141 2.568062 TGGAGTACCAACCGCTATTCAA 59.432 45.455 0.00 0.00 43.91 2.69
141 142 3.195661 GGAGTACCAACCGCTATTCAAG 58.804 50.000 0.00 0.00 35.97 3.02
142 143 3.195661 GAGTACCAACCGCTATTCAAGG 58.804 50.000 0.00 0.00 0.00 3.61
143 144 1.669265 GTACCAACCGCTATTCAAGGC 59.331 52.381 0.00 0.00 0.00 4.35
148 149 4.201951 CGCTATTCAAGGCGGTGT 57.798 55.556 0.00 0.00 46.42 4.16
149 150 1.715585 CGCTATTCAAGGCGGTGTG 59.284 57.895 0.00 0.00 46.42 3.82
150 151 1.019278 CGCTATTCAAGGCGGTGTGT 61.019 55.000 0.00 0.00 46.42 3.72
151 152 1.737696 CGCTATTCAAGGCGGTGTGTA 60.738 52.381 0.00 0.00 46.42 2.90
152 153 2.561569 GCTATTCAAGGCGGTGTGTAT 58.438 47.619 0.00 0.00 0.00 2.29
153 154 2.287915 GCTATTCAAGGCGGTGTGTATG 59.712 50.000 0.00 0.00 0.00 2.39
154 155 2.489938 ATTCAAGGCGGTGTGTATGT 57.510 45.000 0.00 0.00 0.00 2.29
155 156 1.518325 TTCAAGGCGGTGTGTATGTG 58.482 50.000 0.00 0.00 0.00 3.21
156 157 0.321210 TCAAGGCGGTGTGTATGTGG 60.321 55.000 0.00 0.00 0.00 4.17
157 158 0.605319 CAAGGCGGTGTGTATGTGGT 60.605 55.000 0.00 0.00 0.00 4.16
158 159 0.109723 AAGGCGGTGTGTATGTGGTT 59.890 50.000 0.00 0.00 0.00 3.67
159 160 0.605319 AGGCGGTGTGTATGTGGTTG 60.605 55.000 0.00 0.00 0.00 3.77
160 161 1.582610 GGCGGTGTGTATGTGGTTGG 61.583 60.000 0.00 0.00 0.00 3.77
161 162 0.604243 GCGGTGTGTATGTGGTTGGA 60.604 55.000 0.00 0.00 0.00 3.53
162 163 1.438651 CGGTGTGTATGTGGTTGGAG 58.561 55.000 0.00 0.00 0.00 3.86
163 164 1.165270 GGTGTGTATGTGGTTGGAGC 58.835 55.000 0.00 0.00 0.00 4.70
164 165 1.544537 GGTGTGTATGTGGTTGGAGCA 60.545 52.381 0.00 0.00 0.00 4.26
165 166 1.806542 GTGTGTATGTGGTTGGAGCAG 59.193 52.381 0.00 0.00 0.00 4.24
166 167 1.271325 TGTGTATGTGGTTGGAGCAGG 60.271 52.381 0.00 0.00 0.00 4.85
167 168 1.064003 TGTATGTGGTTGGAGCAGGT 58.936 50.000 0.00 0.00 0.00 4.00
168 169 1.271325 TGTATGTGGTTGGAGCAGGTG 60.271 52.381 0.00 0.00 0.00 4.00
169 170 0.327924 TATGTGGTTGGAGCAGGTGG 59.672 55.000 0.00 0.00 0.00 4.61
170 171 2.985847 GTGGTTGGAGCAGGTGGC 60.986 66.667 0.00 0.00 45.30 5.01
179 180 4.016706 GCAGGTGGCTACGGTGGT 62.017 66.667 0.00 0.00 40.25 4.16
180 181 2.747686 CAGGTGGCTACGGTGGTT 59.252 61.111 0.00 0.00 0.00 3.67
181 182 1.072505 CAGGTGGCTACGGTGGTTT 59.927 57.895 0.00 0.00 0.00 3.27
182 183 0.536460 CAGGTGGCTACGGTGGTTTT 60.536 55.000 0.00 0.00 0.00 2.43
183 184 0.184211 AGGTGGCTACGGTGGTTTTT 59.816 50.000 0.00 0.00 0.00 1.94
184 185 1.420891 AGGTGGCTACGGTGGTTTTTA 59.579 47.619 0.00 0.00 0.00 1.52
185 186 1.536766 GGTGGCTACGGTGGTTTTTAC 59.463 52.381 0.00 0.00 0.00 2.01
186 187 1.536766 GTGGCTACGGTGGTTTTTACC 59.463 52.381 0.00 0.00 34.81 2.85
187 188 1.167851 GGCTACGGTGGTTTTTACCC 58.832 55.000 0.00 0.00 34.66 3.69
188 189 1.545204 GGCTACGGTGGTTTTTACCCA 60.545 52.381 0.00 0.00 34.66 4.51
189 190 2.228925 GCTACGGTGGTTTTTACCCAA 58.771 47.619 0.00 0.00 34.66 4.12
190 191 2.030893 GCTACGGTGGTTTTTACCCAAC 60.031 50.000 0.00 0.00 36.27 3.77
191 192 2.140839 ACGGTGGTTTTTACCCAACA 57.859 45.000 0.00 0.00 39.80 3.33
192 193 2.668625 ACGGTGGTTTTTACCCAACAT 58.331 42.857 0.00 0.00 39.80 2.71
193 194 2.362717 ACGGTGGTTTTTACCCAACATG 59.637 45.455 0.00 0.00 39.80 3.21
194 195 2.288518 CGGTGGTTTTTACCCAACATGG 60.289 50.000 0.00 0.00 39.80 3.66
203 204 2.601067 CCAACATGGGTGGCAGCA 60.601 61.111 19.48 5.16 32.67 4.41
204 205 1.985662 CCAACATGGGTGGCAGCAT 60.986 57.895 19.48 7.36 32.67 3.79
205 206 0.683828 CCAACATGGGTGGCAGCATA 60.684 55.000 19.48 7.19 32.67 3.14
206 207 1.184431 CAACATGGGTGGCAGCATAA 58.816 50.000 19.48 3.65 0.00 1.90
207 208 1.758280 CAACATGGGTGGCAGCATAAT 59.242 47.619 19.48 6.00 0.00 1.28
208 209 1.696063 ACATGGGTGGCAGCATAATC 58.304 50.000 19.48 0.71 0.00 1.75
209 210 1.216175 ACATGGGTGGCAGCATAATCT 59.784 47.619 19.48 0.00 0.00 2.40
210 211 2.313317 CATGGGTGGCAGCATAATCTT 58.687 47.619 19.48 0.00 0.00 2.40
211 212 2.057137 TGGGTGGCAGCATAATCTTC 57.943 50.000 19.48 0.00 0.00 2.87
212 213 0.947244 GGGTGGCAGCATAATCTTCG 59.053 55.000 19.48 0.00 0.00 3.79
213 214 0.947244 GGTGGCAGCATAATCTTCGG 59.053 55.000 12.58 0.00 0.00 4.30
214 215 1.475034 GGTGGCAGCATAATCTTCGGA 60.475 52.381 12.58 0.00 0.00 4.55
215 216 2.498167 GTGGCAGCATAATCTTCGGAT 58.502 47.619 0.00 0.00 36.00 4.18
216 217 2.481952 GTGGCAGCATAATCTTCGGATC 59.518 50.000 0.00 0.00 32.82 3.36
217 218 1.728971 GGCAGCATAATCTTCGGATCG 59.271 52.381 0.00 0.00 32.82 3.69
218 219 1.728971 GCAGCATAATCTTCGGATCGG 59.271 52.381 0.00 0.00 32.82 4.18
219 220 2.868044 GCAGCATAATCTTCGGATCGGT 60.868 50.000 0.00 0.00 32.82 4.69
220 221 2.989840 CAGCATAATCTTCGGATCGGTC 59.010 50.000 0.00 0.00 32.82 4.79
221 222 2.028930 AGCATAATCTTCGGATCGGTCC 60.029 50.000 4.00 4.00 41.40 4.46
222 223 2.288825 GCATAATCTTCGGATCGGTCCA 60.289 50.000 16.61 0.00 45.37 4.02
223 224 3.318017 CATAATCTTCGGATCGGTCCAC 58.682 50.000 16.61 0.00 45.37 4.02
224 225 0.464452 AATCTTCGGATCGGTCCACC 59.536 55.000 16.61 0.00 45.37 4.61
225 226 0.686441 ATCTTCGGATCGGTCCACCA 60.686 55.000 16.61 0.00 45.37 4.17
226 227 0.686441 TCTTCGGATCGGTCCACCAT 60.686 55.000 16.61 0.00 45.37 3.55
227 228 0.249489 CTTCGGATCGGTCCACCATC 60.249 60.000 16.61 0.00 45.37 3.51
228 229 1.682451 TTCGGATCGGTCCACCATCC 61.682 60.000 16.61 13.34 45.37 3.51
229 230 2.829592 GGATCGGTCCACCATCCC 59.170 66.667 10.69 0.56 44.42 3.85
230 231 1.766461 GGATCGGTCCACCATCCCT 60.766 63.158 10.69 0.00 44.42 4.20
231 232 1.345715 GGATCGGTCCACCATCCCTT 61.346 60.000 10.69 0.00 44.42 3.95
232 233 0.179045 GATCGGTCCACCATCCCTTG 60.179 60.000 0.00 0.00 35.14 3.61
233 234 2.270874 ATCGGTCCACCATCCCTTGC 62.271 60.000 0.00 0.00 35.14 4.01
234 235 2.438434 GGTCCACCATCCCTTGCG 60.438 66.667 0.00 0.00 35.64 4.85
235 236 2.668632 GTCCACCATCCCTTGCGA 59.331 61.111 0.00 0.00 0.00 5.10
236 237 1.745489 GTCCACCATCCCTTGCGAC 60.745 63.158 0.00 0.00 0.00 5.19
237 238 2.220586 TCCACCATCCCTTGCGACA 61.221 57.895 0.00 0.00 0.00 4.35
238 239 1.077501 CCACCATCCCTTGCGACAT 60.078 57.895 0.00 0.00 0.00 3.06
239 240 0.180171 CCACCATCCCTTGCGACATA 59.820 55.000 0.00 0.00 0.00 2.29
240 241 1.586422 CACCATCCCTTGCGACATAG 58.414 55.000 0.00 0.00 0.00 2.23
241 242 0.469917 ACCATCCCTTGCGACATAGG 59.530 55.000 0.00 0.00 0.00 2.57
242 243 0.886490 CCATCCCTTGCGACATAGGC 60.886 60.000 0.00 0.00 0.00 3.93
243 244 0.179048 CATCCCTTGCGACATAGGCA 60.179 55.000 0.00 0.00 38.93 4.75
244 245 0.767375 ATCCCTTGCGACATAGGCAT 59.233 50.000 0.00 0.00 40.62 4.40
245 246 1.419381 TCCCTTGCGACATAGGCATA 58.581 50.000 0.00 0.00 40.62 3.14
246 247 1.344438 TCCCTTGCGACATAGGCATAG 59.656 52.381 0.00 0.00 40.62 2.23
247 248 1.070758 CCCTTGCGACATAGGCATAGT 59.929 52.381 0.00 0.00 40.62 2.12
248 249 2.138320 CCTTGCGACATAGGCATAGTG 58.862 52.381 0.00 0.00 40.62 2.74
249 250 2.483714 CCTTGCGACATAGGCATAGTGT 60.484 50.000 0.00 0.00 40.62 3.55
250 251 2.509052 TGCGACATAGGCATAGTGTC 57.491 50.000 9.48 9.48 39.02 3.67
254 255 3.014604 GACATAGGCATAGTGTCGGTC 57.985 52.381 5.60 0.00 33.73 4.79
255 256 2.623889 GACATAGGCATAGTGTCGGTCT 59.376 50.000 5.60 0.00 33.73 3.85
256 257 3.819337 GACATAGGCATAGTGTCGGTCTA 59.181 47.826 5.60 0.00 33.73 2.59
257 258 4.408276 ACATAGGCATAGTGTCGGTCTAT 58.592 43.478 0.00 0.00 0.00 1.98
258 259 5.567430 ACATAGGCATAGTGTCGGTCTATA 58.433 41.667 0.00 0.00 0.00 1.31
259 260 5.648526 ACATAGGCATAGTGTCGGTCTATAG 59.351 44.000 0.00 0.00 0.00 1.31
260 261 3.422796 AGGCATAGTGTCGGTCTATAGG 58.577 50.000 0.00 0.00 0.00 2.57
261 262 3.074094 AGGCATAGTGTCGGTCTATAGGA 59.926 47.826 0.00 0.00 0.00 2.94
262 263 3.190953 GGCATAGTGTCGGTCTATAGGAC 59.809 52.174 0.00 0.46 43.79 3.85
263 264 4.073549 GCATAGTGTCGGTCTATAGGACT 58.926 47.826 0.00 0.00 43.97 3.85
264 265 4.154556 GCATAGTGTCGGTCTATAGGACTC 59.845 50.000 0.00 1.36 43.97 3.36
265 266 5.553123 CATAGTGTCGGTCTATAGGACTCT 58.447 45.833 13.29 13.29 43.97 3.24
266 267 6.699366 CATAGTGTCGGTCTATAGGACTCTA 58.301 44.000 15.58 15.58 43.97 2.43
267 268 4.959723 AGTGTCGGTCTATAGGACTCTAC 58.040 47.826 0.00 0.00 43.97 2.59
268 269 4.655186 AGTGTCGGTCTATAGGACTCTACT 59.345 45.833 0.00 0.00 43.97 2.57
269 270 4.751098 GTGTCGGTCTATAGGACTCTACTG 59.249 50.000 0.00 0.00 43.97 2.74
270 271 4.408270 TGTCGGTCTATAGGACTCTACTGT 59.592 45.833 0.00 0.00 43.97 3.55
271 272 4.990426 GTCGGTCTATAGGACTCTACTGTC 59.010 50.000 0.00 0.00 43.97 3.51
272 273 3.989167 CGGTCTATAGGACTCTACTGTCG 59.011 52.174 0.00 0.00 43.97 4.35
273 274 3.747529 GGTCTATAGGACTCTACTGTCGC 59.252 52.174 0.00 0.00 43.97 5.19
274 275 3.747529 GTCTATAGGACTCTACTGTCGCC 59.252 52.174 0.00 0.00 41.46 5.54
275 276 1.595466 ATAGGACTCTACTGTCGCCG 58.405 55.000 0.00 0.00 37.81 6.46
276 277 0.538584 TAGGACTCTACTGTCGCCGA 59.461 55.000 0.00 0.00 37.81 5.54
277 278 0.107116 AGGACTCTACTGTCGCCGAT 60.107 55.000 0.00 0.00 37.81 4.18
278 279 0.739561 GGACTCTACTGTCGCCGATT 59.260 55.000 0.00 0.00 37.81 3.34
279 280 1.134560 GGACTCTACTGTCGCCGATTT 59.865 52.381 0.00 0.00 37.81 2.17
280 281 2.186076 GACTCTACTGTCGCCGATTTG 58.814 52.381 0.00 0.00 0.00 2.32
281 282 1.544691 ACTCTACTGTCGCCGATTTGT 59.455 47.619 0.00 0.00 0.00 2.83
282 283 2.186076 CTCTACTGTCGCCGATTTGTC 58.814 52.381 0.00 0.00 0.00 3.18
283 284 1.816835 TCTACTGTCGCCGATTTGTCT 59.183 47.619 0.00 0.00 0.00 3.41
284 285 2.230508 TCTACTGTCGCCGATTTGTCTT 59.769 45.455 0.00 0.00 0.00 3.01
285 286 1.878953 ACTGTCGCCGATTTGTCTTT 58.121 45.000 0.00 0.00 0.00 2.52
286 287 2.218603 ACTGTCGCCGATTTGTCTTTT 58.781 42.857 0.00 0.00 0.00 2.27
287 288 2.616842 ACTGTCGCCGATTTGTCTTTTT 59.383 40.909 0.00 0.00 0.00 1.94
312 313 8.795786 TTTCATTTATTTTGTCAGACTTTCCG 57.204 30.769 1.31 0.00 0.00 4.30
313 314 7.504924 TCATTTATTTTGTCAGACTTTCCGT 57.495 32.000 1.31 0.00 0.00 4.69
314 315 7.359595 TCATTTATTTTGTCAGACTTTCCGTG 58.640 34.615 1.31 0.00 0.00 4.94
315 316 6.687081 TTTATTTTGTCAGACTTTCCGTGT 57.313 33.333 1.31 0.00 0.00 4.49
316 317 6.687081 TTATTTTGTCAGACTTTCCGTGTT 57.313 33.333 1.31 0.00 0.00 3.32
317 318 4.349663 TTTTGTCAGACTTTCCGTGTTG 57.650 40.909 1.31 0.00 0.00 3.33
318 319 1.948104 TGTCAGACTTTCCGTGTTGG 58.052 50.000 1.31 0.00 40.09 3.77
326 327 4.846551 TCCGTGTTGGACTGTGTG 57.153 55.556 0.00 0.00 43.74 3.82
327 328 1.522806 TCCGTGTTGGACTGTGTGC 60.523 57.895 0.00 0.00 43.74 4.57
328 329 1.817520 CCGTGTTGGACTGTGTGCA 60.818 57.895 0.00 0.00 42.00 4.57
329 330 1.165907 CCGTGTTGGACTGTGTGCAT 61.166 55.000 0.00 0.00 42.00 3.96
330 331 0.662619 CGTGTTGGACTGTGTGCATT 59.337 50.000 0.00 0.00 33.22 3.56
331 332 1.334059 CGTGTTGGACTGTGTGCATTC 60.334 52.381 0.00 0.00 33.22 2.67
332 333 1.949525 GTGTTGGACTGTGTGCATTCT 59.050 47.619 0.00 0.00 33.22 2.40
333 334 3.138304 GTGTTGGACTGTGTGCATTCTA 58.862 45.455 0.00 0.00 33.22 2.10
334 335 3.187227 GTGTTGGACTGTGTGCATTCTAG 59.813 47.826 0.00 0.00 33.22 2.43
335 336 3.181455 TGTTGGACTGTGTGCATTCTAGT 60.181 43.478 0.00 0.00 33.22 2.57
336 337 3.769739 TGGACTGTGTGCATTCTAGTT 57.230 42.857 0.00 0.00 0.00 2.24
337 338 4.882842 TGGACTGTGTGCATTCTAGTTA 57.117 40.909 0.00 0.00 0.00 2.24
338 339 5.420725 TGGACTGTGTGCATTCTAGTTAT 57.579 39.130 0.00 0.00 0.00 1.89
339 340 5.178061 TGGACTGTGTGCATTCTAGTTATG 58.822 41.667 0.00 0.00 0.00 1.90
340 341 4.034510 GGACTGTGTGCATTCTAGTTATGC 59.965 45.833 19.16 19.16 46.63 3.14
347 348 2.810852 GCATTCTAGTTATGCAGAGGCC 59.189 50.000 20.32 0.00 45.93 5.19
348 349 2.890808 TTCTAGTTATGCAGAGGCCG 57.109 50.000 0.00 0.00 40.13 6.13
349 350 1.040646 TCTAGTTATGCAGAGGCCGG 58.959 55.000 0.00 0.00 40.13 6.13
350 351 0.034059 CTAGTTATGCAGAGGCCGGG 59.966 60.000 2.18 0.00 40.13 5.73
351 352 0.689745 TAGTTATGCAGAGGCCGGGT 60.690 55.000 2.18 0.00 40.13 5.28
352 353 1.819632 GTTATGCAGAGGCCGGGTG 60.820 63.158 2.18 0.00 40.13 4.61
353 354 2.297895 TTATGCAGAGGCCGGGTGT 61.298 57.895 2.18 0.00 40.13 4.16
354 355 1.847798 TTATGCAGAGGCCGGGTGTT 61.848 55.000 2.18 0.00 40.13 3.32
355 356 0.978667 TATGCAGAGGCCGGGTGTTA 60.979 55.000 2.18 0.00 40.13 2.41
356 357 2.436115 GCAGAGGCCGGGTGTTAC 60.436 66.667 2.18 0.00 0.00 2.50
357 358 2.955881 GCAGAGGCCGGGTGTTACT 61.956 63.158 2.18 0.00 0.00 2.24
358 359 1.218316 CAGAGGCCGGGTGTTACTC 59.782 63.158 2.18 0.00 0.00 2.59
359 360 1.229082 AGAGGCCGGGTGTTACTCA 60.229 57.895 2.18 0.00 0.00 3.41
360 361 0.617820 AGAGGCCGGGTGTTACTCAT 60.618 55.000 2.18 0.00 0.00 2.90
361 362 1.117150 GAGGCCGGGTGTTACTCATA 58.883 55.000 2.18 0.00 0.00 2.15
362 363 1.483415 GAGGCCGGGTGTTACTCATAA 59.517 52.381 2.18 0.00 0.00 1.90
363 364 2.104281 GAGGCCGGGTGTTACTCATAAT 59.896 50.000 2.18 0.00 0.00 1.28
364 365 2.158813 AGGCCGGGTGTTACTCATAATG 60.159 50.000 2.18 0.00 0.00 1.90
365 366 1.602377 GCCGGGTGTTACTCATAATGC 59.398 52.381 2.18 0.00 0.00 3.56
366 367 2.745152 GCCGGGTGTTACTCATAATGCT 60.745 50.000 2.18 0.00 0.00 3.79
367 368 3.541632 CCGGGTGTTACTCATAATGCTT 58.458 45.455 0.00 0.00 0.00 3.91
368 369 3.945285 CCGGGTGTTACTCATAATGCTTT 59.055 43.478 0.00 0.00 0.00 3.51
369 370 4.201910 CCGGGTGTTACTCATAATGCTTTG 60.202 45.833 0.00 0.00 0.00 2.77
370 371 4.394920 CGGGTGTTACTCATAATGCTTTGT 59.605 41.667 0.00 0.00 0.00 2.83
371 372 5.583061 CGGGTGTTACTCATAATGCTTTGTA 59.417 40.000 0.00 0.00 0.00 2.41
372 373 6.260050 CGGGTGTTACTCATAATGCTTTGTAT 59.740 38.462 0.00 0.00 0.00 2.29
373 374 7.518370 CGGGTGTTACTCATAATGCTTTGTATC 60.518 40.741 0.00 0.00 0.00 2.24
374 375 7.255139 GGGTGTTACTCATAATGCTTTGTATCC 60.255 40.741 0.00 0.00 0.00 2.59
375 376 7.345192 GTGTTACTCATAATGCTTTGTATCCG 58.655 38.462 0.00 0.00 0.00 4.18
376 377 6.018262 TGTTACTCATAATGCTTTGTATCCGC 60.018 38.462 0.00 0.00 0.00 5.54
377 378 4.708177 ACTCATAATGCTTTGTATCCGCT 58.292 39.130 0.00 0.00 0.00 5.52
378 379 5.126067 ACTCATAATGCTTTGTATCCGCTT 58.874 37.500 0.00 0.00 0.00 4.68
379 380 5.008019 ACTCATAATGCTTTGTATCCGCTTG 59.992 40.000 0.00 0.00 0.00 4.01
380 381 5.122519 TCATAATGCTTTGTATCCGCTTGA 58.877 37.500 0.00 0.00 0.00 3.02
381 382 5.764686 TCATAATGCTTTGTATCCGCTTGAT 59.235 36.000 0.00 0.00 37.49 2.57
382 383 3.976793 ATGCTTTGTATCCGCTTGATG 57.023 42.857 0.00 0.00 34.76 3.07
383 384 1.401552 TGCTTTGTATCCGCTTGATGC 59.598 47.619 0.00 0.00 36.68 3.91
384 385 1.672881 GCTTTGTATCCGCTTGATGCT 59.327 47.619 3.59 0.00 37.04 3.79
385 386 2.872245 GCTTTGTATCCGCTTGATGCTA 59.128 45.455 3.59 0.00 37.04 3.49
386 387 3.499918 GCTTTGTATCCGCTTGATGCTAT 59.500 43.478 3.59 0.00 37.04 2.97
387 388 4.690748 GCTTTGTATCCGCTTGATGCTATA 59.309 41.667 3.59 0.00 37.04 1.31
388 389 5.352569 GCTTTGTATCCGCTTGATGCTATAT 59.647 40.000 3.59 0.00 37.04 0.86
389 390 6.128172 GCTTTGTATCCGCTTGATGCTATATT 60.128 38.462 3.59 0.00 37.04 1.28
390 391 7.573843 GCTTTGTATCCGCTTGATGCTATATTT 60.574 37.037 3.59 0.00 37.04 1.40
391 392 6.968131 TGTATCCGCTTGATGCTATATTTC 57.032 37.500 3.59 0.00 37.04 2.17
392 393 5.576774 TGTATCCGCTTGATGCTATATTTCG 59.423 40.000 3.59 0.00 37.04 3.46
393 394 4.251543 TCCGCTTGATGCTATATTTCGA 57.748 40.909 0.00 0.00 40.11 3.71
394 395 4.237724 TCCGCTTGATGCTATATTTCGAG 58.762 43.478 0.00 0.00 40.11 4.04
395 396 4.022329 TCCGCTTGATGCTATATTTCGAGA 60.022 41.667 0.00 0.00 40.11 4.04
396 397 4.867047 CCGCTTGATGCTATATTTCGAGAT 59.133 41.667 0.00 0.00 40.11 2.75
397 398 6.036470 CCGCTTGATGCTATATTTCGAGATA 58.964 40.000 0.00 0.00 40.11 1.98
398 399 6.531594 CCGCTTGATGCTATATTTCGAGATAA 59.468 38.462 0.00 0.00 40.11 1.75
399 400 7.223582 CCGCTTGATGCTATATTTCGAGATAAT 59.776 37.037 0.00 0.00 40.11 1.28
400 401 9.237846 CGCTTGATGCTATATTTCGAGATAATA 57.762 33.333 0.00 0.00 40.11 0.98
408 409 9.974750 GCTATATTTCGAGATAATAAAAGCACC 57.025 33.333 14.80 0.00 34.26 5.01
411 412 7.881775 ATTTCGAGATAATAAAAGCACCCTT 57.118 32.000 0.00 0.00 0.00 3.95
412 413 7.696992 TTTCGAGATAATAAAAGCACCCTTT 57.303 32.000 0.00 0.00 42.93 3.11
413 414 8.795842 TTTCGAGATAATAAAAGCACCCTTTA 57.204 30.769 0.00 0.00 40.30 1.85
414 415 8.974060 TTCGAGATAATAAAAGCACCCTTTAT 57.026 30.769 0.00 0.00 40.30 1.40
415 416 8.603242 TCGAGATAATAAAAGCACCCTTTATC 57.397 34.615 0.00 0.00 40.30 1.75
416 417 7.384115 TCGAGATAATAAAAGCACCCTTTATCG 59.616 37.037 0.00 0.00 40.30 2.92
417 418 7.384115 CGAGATAATAAAAGCACCCTTTATCGA 59.616 37.037 0.00 0.00 40.30 3.59
418 419 8.974060 AGATAATAAAAGCACCCTTTATCGAA 57.026 30.769 0.00 0.00 40.30 3.71
419 420 9.403583 AGATAATAAAAGCACCCTTTATCGAAA 57.596 29.630 0.00 0.00 40.30 3.46
463 471 7.852263 ACCTGTAGTCTAGATTTATGCAACTT 58.148 34.615 0.00 0.00 0.00 2.66
485 493 9.821662 AACTTAAAATGACAAACGCTAATCTAC 57.178 29.630 0.00 0.00 0.00 2.59
486 494 8.995220 ACTTAAAATGACAAACGCTAATCTACA 58.005 29.630 0.00 0.00 0.00 2.74
515 523 4.911754 GCAAACGCGTCAATATATGTTG 57.088 40.909 14.44 11.32 0.00 3.33
517 525 4.202158 GCAAACGCGTCAATATATGTTGTG 59.798 41.667 14.44 7.28 0.00 3.33
640 656 2.467566 AATAACGCCACCTTCTCGTT 57.532 45.000 4.69 4.69 46.38 3.85
651 667 5.747675 GCCACCTTCTCGTTTAATACTACTC 59.252 44.000 0.00 0.00 0.00 2.59
653 669 6.271566 CACCTTCTCGTTTAATACTACTCCC 58.728 44.000 0.00 0.00 0.00 4.30
654 670 5.954150 ACCTTCTCGTTTAATACTACTCCCA 59.046 40.000 0.00 0.00 0.00 4.37
655 671 6.610425 ACCTTCTCGTTTAATACTACTCCCAT 59.390 38.462 0.00 0.00 0.00 4.00
656 672 7.146648 CCTTCTCGTTTAATACTACTCCCATC 58.853 42.308 0.00 0.00 0.00 3.51
657 673 6.309712 TCTCGTTTAATACTACTCCCATCG 57.690 41.667 0.00 0.00 0.00 3.84
658 674 5.240183 TCTCGTTTAATACTACTCCCATCGG 59.760 44.000 0.00 0.00 0.00 4.18
659 675 4.889409 TCGTTTAATACTACTCCCATCGGT 59.111 41.667 0.00 0.00 0.00 4.69
672 688 4.408276 TCCCATCGGTTCCAAAATACAAA 58.592 39.130 0.00 0.00 0.00 2.83
717 733 7.618442 TGAAAAATCTCTCATTTACGATACGC 58.382 34.615 0.00 0.00 0.00 4.42
726 742 3.786516 TTTACGATACGCAGTCCATGA 57.213 42.857 0.00 0.00 43.93 3.07
754 779 7.148641 ACAACATCATCATTATCGAGTACTCC 58.851 38.462 17.23 0.00 0.00 3.85
755 780 7.014711 ACAACATCATCATTATCGAGTACTCCT 59.985 37.037 17.23 7.50 0.00 3.69
756 781 8.515414 CAACATCATCATTATCGAGTACTCCTA 58.485 37.037 17.23 6.18 0.00 2.94
757 782 8.046294 ACATCATCATTATCGAGTACTCCTAC 57.954 38.462 17.23 0.00 0.00 3.18
758 783 7.885922 ACATCATCATTATCGAGTACTCCTACT 59.114 37.037 17.23 1.34 35.77 2.57
759 784 7.908827 TCATCATTATCGAGTACTCCTACTC 57.091 40.000 17.23 0.00 43.97 2.59
817 845 6.753107 AATTGTACTTCGAGGGGTTATTTG 57.247 37.500 0.00 0.00 0.00 2.32
849 877 1.429148 CGCCATCACGCTACTTTCCC 61.429 60.000 0.00 0.00 0.00 3.97
856 884 2.565391 TCACGCTACTTTCCCAGATCAA 59.435 45.455 0.00 0.00 0.00 2.57
903 1766 2.105821 TCTATAAAACCATGGCTCCCCG 59.894 50.000 13.04 0.00 0.00 5.73
930 1793 4.882671 TTAAGCGCTCCAGAAATCATTC 57.117 40.909 12.06 0.00 35.70 2.67
931 1794 2.706339 AGCGCTCCAGAAATCATTCT 57.294 45.000 2.64 0.00 46.91 2.40
932 1795 2.559440 AGCGCTCCAGAAATCATTCTC 58.441 47.619 2.64 0.00 44.11 2.87
933 1796 2.093288 AGCGCTCCAGAAATCATTCTCA 60.093 45.455 2.64 0.00 44.11 3.27
934 1797 2.877168 GCGCTCCAGAAATCATTCTCAT 59.123 45.455 0.00 0.00 44.11 2.90
935 1798 3.314635 GCGCTCCAGAAATCATTCTCATT 59.685 43.478 0.00 0.00 44.11 2.57
971 1838 6.370433 AAAGCAGAAAGAACAGAGAGAAAC 57.630 37.500 0.00 0.00 0.00 2.78
1330 2203 4.722535 AGGAGGAGCCCGGCAAGA 62.723 66.667 13.15 0.00 37.37 3.02
1404 2286 2.202892 GGCGACGGGTTCATCTCC 60.203 66.667 0.00 0.00 0.00 3.71
1678 2593 0.249073 CGATCTGGCGGTAGGTCTTG 60.249 60.000 0.00 0.00 0.00 3.02
1712 2627 3.084039 GACAACCATGGTCACATCACAT 58.916 45.455 20.07 0.00 34.35 3.21
1857 2775 1.279271 CTGCCTAACCTGTTACTGCCT 59.721 52.381 5.04 0.00 0.00 4.75
1869 2787 0.953471 TACTGCCTTTGCGCGTTGAT 60.953 50.000 8.43 0.00 41.78 2.57
1874 2797 0.518355 CCTTTGCGCGTTGATGTACG 60.518 55.000 8.43 0.00 44.09 3.67
1918 2846 8.715191 TGAATACACAATTTATTTGGCCAATC 57.285 30.769 21.26 8.98 39.80 2.67
1925 2853 6.149807 ACAATTTATTTGGCCAATCAAGCAAG 59.850 34.615 21.26 8.97 39.80 4.01
1943 2871 7.809331 TCAAGCAAGTATGTTCATGAATGTTTC 59.191 33.333 12.12 0.00 0.00 2.78
1964 2892 6.935240 TTCTCTCTATGTTTCTCCTTTGGA 57.065 37.500 0.00 0.00 0.00 3.53
1973 2901 9.415544 CTATGTTTCTCCTTTGGAAAGAAATTG 57.584 33.333 0.47 0.00 38.28 2.32
1979 2907 5.208121 TCCTTTGGAAAGAAATTGGACACT 58.792 37.500 0.47 0.00 38.28 3.55
1981 2909 6.836527 TCCTTTGGAAAGAAATTGGACACTTA 59.163 34.615 0.47 0.00 38.28 2.24
1992 2957 9.401058 AGAAATTGGACACTTATTAATCTCAGG 57.599 33.333 0.00 0.00 0.00 3.86
1999 2964 7.364762 GGACACTTATTAATCTCAGGGAGACAA 60.365 40.741 0.00 0.00 41.76 3.18
2006 2971 1.002430 TCTCAGGGAGACAACATGCAC 59.998 52.381 0.00 0.00 33.35 4.57
2007 2972 0.036732 TCAGGGAGACAACATGCACC 59.963 55.000 0.00 0.00 0.00 5.01
2009 2974 0.037303 AGGGAGACAACATGCACCAG 59.963 55.000 0.00 0.00 0.00 4.00
2022 3153 6.384342 ACATGCACCAGATATAGGATTCAT 57.616 37.500 0.00 0.00 0.00 2.57
2023 3154 7.500629 ACATGCACCAGATATAGGATTCATA 57.499 36.000 0.00 0.00 0.00 2.15
2024 3155 8.098963 ACATGCACCAGATATAGGATTCATAT 57.901 34.615 0.00 0.00 0.00 1.78
2048 3193 5.697082 TGGGGAATTTTAGTACGGTACAT 57.303 39.130 19.62 8.00 0.00 2.29
2049 3194 6.805016 TGGGGAATTTTAGTACGGTACATA 57.195 37.500 19.62 7.12 0.00 2.29
2050 3195 7.377696 TGGGGAATTTTAGTACGGTACATAT 57.622 36.000 19.62 2.70 0.00 1.78
2051 3196 7.218614 TGGGGAATTTTAGTACGGTACATATG 58.781 38.462 19.62 0.00 0.00 1.78
2052 3197 7.147514 TGGGGAATTTTAGTACGGTACATATGT 60.148 37.037 19.62 13.93 0.00 2.29
2075 3220 8.589335 TGTAACTAGCACAAAAACAAAACAAA 57.411 26.923 0.00 0.00 0.00 2.83
2079 3224 8.947304 ACTAGCACAAAAACAAAACAAAATTG 57.053 26.923 0.00 0.00 0.00 2.32
2080 3225 8.563732 ACTAGCACAAAAACAAAACAAAATTGT 58.436 25.926 0.00 0.00 44.72 2.71
2083 3228 9.175060 AGCACAAAAACAAAACAAAATTGTAAC 57.825 25.926 0.00 0.00 41.31 2.50
2084 3229 9.175060 GCACAAAAACAAAACAAAATTGTAACT 57.825 25.926 0.00 0.00 41.31 2.24
2131 3303 5.902681 AGAATAGTATGCTAAGCACACGAA 58.097 37.500 0.00 0.00 41.22 3.85
2140 3312 3.363673 GCTAAGCACACGAAGGTTGTTAC 60.364 47.826 0.00 0.00 0.00 2.50
2220 3392 1.352017 TCCACATGGTCTGCACTTCAT 59.648 47.619 0.00 0.00 36.34 2.57
2221 3393 1.741706 CCACATGGTCTGCACTTCATC 59.258 52.381 0.00 0.00 0.00 2.92
2222 3394 2.429478 CACATGGTCTGCACTTCATCA 58.571 47.619 0.00 0.00 0.00 3.07
2229 3401 3.559242 GGTCTGCACTTCATCAATAGAGC 59.441 47.826 0.00 0.00 0.00 4.09
2241 3413 7.851387 TCATCAATAGAGCTATAGACCTACG 57.149 40.000 3.21 0.10 0.00 3.51
2243 3415 6.124316 TCAATAGAGCTATAGACCTACGGT 57.876 41.667 3.21 0.00 39.44 4.83
2248 3420 5.939447 AGAGCTATAGACCTACGGTACTTT 58.061 41.667 3.21 0.00 35.25 2.66
2260 3432 4.096732 ACGGTACTTTATTACGCGTCTT 57.903 40.909 18.63 7.12 28.79 3.01
2265 3437 4.579270 ACTTTATTACGCGTCTTTGCTC 57.421 40.909 18.63 0.00 0.00 4.26
2268 3440 1.359848 ATTACGCGTCTTTGCTCTGG 58.640 50.000 18.63 0.00 0.00 3.86
2278 3450 4.753107 CGTCTTTGCTCTGGGTTAAGTTTA 59.247 41.667 0.00 0.00 0.00 2.01
2318 3490 1.748493 GTGTTCCTTTGGTTGTGCAGA 59.252 47.619 0.00 0.00 0.00 4.26
2322 3494 2.238521 TCCTTTGGTTGTGCAGATTCC 58.761 47.619 0.00 0.00 0.00 3.01
2341 3513 1.747709 CAAGCACTGGAGGATTGGAG 58.252 55.000 0.00 0.00 0.00 3.86
2391 3570 4.510340 TCGCTTCAGACCTTAAAAGTGAAC 59.490 41.667 0.00 0.00 35.84 3.18
2451 3630 1.202758 TGCTAGGGAGTTGGTGTGTTG 60.203 52.381 0.00 0.00 0.00 3.33
2493 3672 1.283029 TCCTGGCTTGCAATTCTAGCT 59.717 47.619 0.00 0.00 42.09 3.32
2495 3674 3.054434 TCCTGGCTTGCAATTCTAGCTTA 60.054 43.478 0.00 0.00 42.09 3.09
2497 3676 4.340381 CCTGGCTTGCAATTCTAGCTTATT 59.660 41.667 0.00 0.00 42.09 1.40
2503 3682 7.806960 GGCTTGCAATTCTAGCTTATTCTAATG 59.193 37.037 0.00 0.00 42.09 1.90
2508 3687 9.443283 GCAATTCTAGCTTATTCTAATGTGTTG 57.557 33.333 0.00 0.00 0.00 3.33
2528 3711 7.280428 TGTGTTGTAAGTTTTATCCTTCGTTCA 59.720 33.333 0.00 0.00 0.00 3.18
2562 3745 4.204799 AGGTACTGTGCGTCTGATGTATA 58.795 43.478 0.00 0.00 37.18 1.47
2565 3748 4.655762 ACTGTGCGTCTGATGTATATGT 57.344 40.909 0.00 0.00 0.00 2.29
2566 3749 4.363138 ACTGTGCGTCTGATGTATATGTG 58.637 43.478 0.00 0.00 0.00 3.21
2567 3750 3.716601 TGTGCGTCTGATGTATATGTGG 58.283 45.455 0.00 0.00 0.00 4.17
2568 3751 2.476619 GTGCGTCTGATGTATATGTGGC 59.523 50.000 0.00 0.00 0.00 5.01
2569 3752 2.365293 TGCGTCTGATGTATATGTGGCT 59.635 45.455 0.00 0.00 0.00 4.75
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.170607 ACATAGCCAAAGCGACCATAGT 59.829 45.455 0.00 0.00 46.67 2.12
1 2 2.838736 ACATAGCCAAAGCGACCATAG 58.161 47.619 0.00 0.00 46.67 2.23
2 3 3.639561 TCTACATAGCCAAAGCGACCATA 59.360 43.478 0.00 0.00 46.67 2.74
3 4 2.434336 TCTACATAGCCAAAGCGACCAT 59.566 45.455 0.00 0.00 46.67 3.55
4 5 1.828595 TCTACATAGCCAAAGCGACCA 59.171 47.619 0.00 0.00 46.67 4.02
5 6 2.596904 TCTACATAGCCAAAGCGACC 57.403 50.000 0.00 0.00 46.67 4.79
6 7 4.570772 TCATTTCTACATAGCCAAAGCGAC 59.429 41.667 0.00 0.00 46.67 5.19
7 8 4.765273 TCATTTCTACATAGCCAAAGCGA 58.235 39.130 0.00 0.00 46.67 4.93
8 9 5.679734 ATCATTTCTACATAGCCAAAGCG 57.320 39.130 0.00 0.00 46.67 4.68
9 10 6.698766 CCAAATCATTTCTACATAGCCAAAGC 59.301 38.462 0.00 0.00 40.32 3.51
10 11 7.775120 ACCAAATCATTTCTACATAGCCAAAG 58.225 34.615 0.00 0.00 0.00 2.77
11 12 7.716799 ACCAAATCATTTCTACATAGCCAAA 57.283 32.000 0.00 0.00 0.00 3.28
12 13 7.716799 AACCAAATCATTTCTACATAGCCAA 57.283 32.000 0.00 0.00 0.00 4.52
13 14 7.716799 AAACCAAATCATTTCTACATAGCCA 57.283 32.000 0.00 0.00 0.00 4.75
14 15 8.250332 TGAAAACCAAATCATTTCTACATAGCC 58.750 33.333 0.00 0.00 34.84 3.93
15 16 9.638239 TTGAAAACCAAATCATTTCTACATAGC 57.362 29.630 0.00 0.00 34.84 2.97
27 28 9.153721 GCATTTCTATCATTGAAAACCAAATCA 57.846 29.630 0.00 0.00 38.43 2.57
28 29 9.374838 AGCATTTCTATCATTGAAAACCAAATC 57.625 29.630 0.00 0.00 38.43 2.17
29 30 9.729281 AAGCATTTCTATCATTGAAAACCAAAT 57.271 25.926 0.00 0.00 38.43 2.32
30 31 9.206870 GAAGCATTTCTATCATTGAAAACCAAA 57.793 29.630 0.00 0.00 38.43 3.28
31 32 8.587608 AGAAGCATTTCTATCATTGAAAACCAA 58.412 29.630 0.00 0.00 41.82 3.67
32 33 8.125978 AGAAGCATTTCTATCATTGAAAACCA 57.874 30.769 0.00 0.00 41.82 3.67
33 34 7.704047 GGAGAAGCATTTCTATCATTGAAAACC 59.296 37.037 0.00 0.00 43.63 3.27
34 35 8.465201 AGGAGAAGCATTTCTATCATTGAAAAC 58.535 33.333 0.00 0.00 43.63 2.43
35 36 8.585471 AGGAGAAGCATTTCTATCATTGAAAA 57.415 30.769 0.00 0.00 43.63 2.29
36 37 8.585471 AAGGAGAAGCATTTCTATCATTGAAA 57.415 30.769 0.00 0.00 43.63 2.69
37 38 8.464404 CAAAGGAGAAGCATTTCTATCATTGAA 58.536 33.333 0.00 0.00 43.63 2.69
38 39 7.415989 GCAAAGGAGAAGCATTTCTATCATTGA 60.416 37.037 8.97 0.00 43.63 2.57
39 40 6.696148 GCAAAGGAGAAGCATTTCTATCATTG 59.304 38.462 0.00 0.00 43.63 2.82
40 41 6.379133 TGCAAAGGAGAAGCATTTCTATCATT 59.621 34.615 0.00 0.00 43.63 2.57
41 42 5.889853 TGCAAAGGAGAAGCATTTCTATCAT 59.110 36.000 0.00 0.00 43.63 2.45
42 43 5.255687 TGCAAAGGAGAAGCATTTCTATCA 58.744 37.500 0.00 0.00 43.63 2.15
43 44 5.221009 CCTGCAAAGGAGAAGCATTTCTATC 60.221 44.000 0.00 0.00 43.63 2.08
44 45 4.643784 CCTGCAAAGGAGAAGCATTTCTAT 59.356 41.667 0.00 0.00 43.63 1.98
45 46 4.012374 CCTGCAAAGGAGAAGCATTTCTA 58.988 43.478 0.00 0.00 43.63 2.10
46 47 2.824341 CCTGCAAAGGAGAAGCATTTCT 59.176 45.455 0.00 0.00 46.22 2.52
47 48 2.560105 ACCTGCAAAGGAGAAGCATTTC 59.440 45.455 0.00 0.00 37.68 2.17
48 49 2.601905 ACCTGCAAAGGAGAAGCATTT 58.398 42.857 0.00 0.00 37.68 2.32
49 50 2.299326 ACCTGCAAAGGAGAAGCATT 57.701 45.000 0.00 0.00 37.68 3.56
50 51 2.299326 AACCTGCAAAGGAGAAGCAT 57.701 45.000 0.00 0.00 37.68 3.79
51 52 2.949177 TAACCTGCAAAGGAGAAGCA 57.051 45.000 0.00 0.00 36.72 3.91
52 53 4.790765 AAATAACCTGCAAAGGAGAAGC 57.209 40.909 0.00 0.00 0.00 3.86
53 54 5.619981 CGGAAAATAACCTGCAAAGGAGAAG 60.620 44.000 0.00 0.00 0.00 2.85
54 55 4.217550 CGGAAAATAACCTGCAAAGGAGAA 59.782 41.667 0.00 0.00 0.00 2.87
55 56 3.756434 CGGAAAATAACCTGCAAAGGAGA 59.244 43.478 0.00 0.00 0.00 3.71
56 57 3.506067 ACGGAAAATAACCTGCAAAGGAG 59.494 43.478 0.00 0.00 0.00 3.69
57 58 3.492337 ACGGAAAATAACCTGCAAAGGA 58.508 40.909 0.00 0.00 0.00 3.36
58 59 3.934457 ACGGAAAATAACCTGCAAAGG 57.066 42.857 0.00 0.00 0.00 3.11
59 60 4.616953 ACAACGGAAAATAACCTGCAAAG 58.383 39.130 0.00 0.00 0.00 2.77
60 61 4.657436 ACAACGGAAAATAACCTGCAAA 57.343 36.364 0.00 0.00 0.00 3.68
61 62 4.319622 CGTACAACGGAAAATAACCTGCAA 60.320 41.667 0.00 0.00 38.08 4.08
62 63 3.186817 CGTACAACGGAAAATAACCTGCA 59.813 43.478 0.00 0.00 38.08 4.41
63 64 3.739494 CGTACAACGGAAAATAACCTGC 58.261 45.455 0.00 0.00 38.08 4.85
64 65 3.186817 TGCGTACAACGGAAAATAACCTG 59.813 43.478 1.25 0.00 39.47 4.00
65 66 3.187022 GTGCGTACAACGGAAAATAACCT 59.813 43.478 0.00 0.00 45.07 3.50
66 67 3.187022 AGTGCGTACAACGGAAAATAACC 59.813 43.478 6.38 0.00 45.07 2.85
67 68 4.388790 GAGTGCGTACAACGGAAAATAAC 58.611 43.478 6.38 0.00 45.07 1.89
68 69 3.121611 CGAGTGCGTACAACGGAAAATAA 59.878 43.478 6.38 0.00 45.07 1.40
69 70 2.662637 CGAGTGCGTACAACGGAAAATA 59.337 45.455 6.38 0.00 45.07 1.40
70 71 1.458064 CGAGTGCGTACAACGGAAAAT 59.542 47.619 6.38 0.00 45.07 1.82
71 72 0.854062 CGAGTGCGTACAACGGAAAA 59.146 50.000 6.38 0.00 45.07 2.29
72 73 1.550659 GCGAGTGCGTACAACGGAAA 61.551 55.000 19.58 0.00 45.07 3.13
73 74 2.017783 GCGAGTGCGTACAACGGAA 61.018 57.895 19.58 0.00 45.07 4.30
74 75 2.429571 GCGAGTGCGTACAACGGA 60.430 61.111 19.58 0.00 42.82 4.69
84 85 2.434134 CCACGTACGAAGCGAGTGC 61.434 63.158 24.41 0.00 43.24 4.40
85 86 1.063951 GACCACGTACGAAGCGAGTG 61.064 60.000 24.41 7.57 33.44 3.51
86 87 1.208614 GACCACGTACGAAGCGAGT 59.791 57.895 24.41 9.11 0.00 4.18
87 88 0.723414 TAGACCACGTACGAAGCGAG 59.277 55.000 24.41 5.89 0.00 5.03
88 89 0.443869 GTAGACCACGTACGAAGCGA 59.556 55.000 24.41 1.73 0.00 4.93
89 90 0.854853 CGTAGACCACGTACGAAGCG 60.855 60.000 24.41 11.70 44.90 4.68
90 91 2.921996 CGTAGACCACGTACGAAGC 58.078 57.895 24.41 8.10 44.90 3.86
99 100 1.198637 ACTCGTTGTAGCGTAGACCAC 59.801 52.381 0.00 0.00 0.00 4.16
100 101 1.198408 CACTCGTTGTAGCGTAGACCA 59.802 52.381 0.00 0.00 0.00 4.02
101 102 1.467035 CCACTCGTTGTAGCGTAGACC 60.467 57.143 0.00 0.00 0.00 3.85
102 103 1.466167 TCCACTCGTTGTAGCGTAGAC 59.534 52.381 0.00 0.00 0.00 2.59
103 104 1.736126 CTCCACTCGTTGTAGCGTAGA 59.264 52.381 0.00 0.00 0.00 2.59
104 105 1.467734 ACTCCACTCGTTGTAGCGTAG 59.532 52.381 0.00 0.00 0.00 3.51
105 106 1.527034 ACTCCACTCGTTGTAGCGTA 58.473 50.000 0.00 0.00 0.00 4.42
106 107 1.198637 GTACTCCACTCGTTGTAGCGT 59.801 52.381 0.00 0.00 0.00 5.07
107 108 1.467035 GGTACTCCACTCGTTGTAGCG 60.467 57.143 0.00 0.00 0.00 4.26
108 109 1.542915 TGGTACTCCACTCGTTGTAGC 59.457 52.381 0.00 0.00 39.03 3.58
109 110 3.572584 GTTGGTACTCCACTCGTTGTAG 58.427 50.000 0.00 0.00 44.22 2.74
110 111 2.297033 GGTTGGTACTCCACTCGTTGTA 59.703 50.000 0.00 0.00 44.22 2.41
111 112 1.069668 GGTTGGTACTCCACTCGTTGT 59.930 52.381 0.00 0.00 44.22 3.32
112 113 1.792006 GGTTGGTACTCCACTCGTTG 58.208 55.000 0.00 0.00 44.22 4.10
113 114 0.316204 CGGTTGGTACTCCACTCGTT 59.684 55.000 0.00 0.00 44.22 3.85
114 115 1.962144 CGGTTGGTACTCCACTCGT 59.038 57.895 0.00 0.00 44.22 4.18
115 116 1.445582 GCGGTTGGTACTCCACTCG 60.446 63.158 0.00 0.00 44.22 4.18
116 117 1.180029 TAGCGGTTGGTACTCCACTC 58.820 55.000 0.00 0.00 44.22 3.51
117 118 1.861982 ATAGCGGTTGGTACTCCACT 58.138 50.000 0.00 0.00 44.22 4.00
118 119 2.093869 TGAATAGCGGTTGGTACTCCAC 60.094 50.000 0.00 0.00 44.22 4.02
119 120 2.181125 TGAATAGCGGTTGGTACTCCA 58.819 47.619 0.00 0.00 42.66 3.86
120 121 2.973694 TGAATAGCGGTTGGTACTCC 57.026 50.000 0.00 0.00 0.00 3.85
121 122 3.195661 CCTTGAATAGCGGTTGGTACTC 58.804 50.000 0.00 0.00 0.00 2.59
122 123 2.679930 GCCTTGAATAGCGGTTGGTACT 60.680 50.000 0.00 0.00 0.00 2.73
123 124 1.669265 GCCTTGAATAGCGGTTGGTAC 59.331 52.381 0.00 0.00 0.00 3.34
124 125 2.032680 GCCTTGAATAGCGGTTGGTA 57.967 50.000 0.00 0.00 0.00 3.25
125 126 2.868253 GCCTTGAATAGCGGTTGGT 58.132 52.632 0.00 0.00 0.00 3.67
132 133 2.018542 TACACACCGCCTTGAATAGC 57.981 50.000 0.00 0.00 0.00 2.97
133 134 3.309682 CACATACACACCGCCTTGAATAG 59.690 47.826 0.00 0.00 0.00 1.73
134 135 3.266636 CACATACACACCGCCTTGAATA 58.733 45.455 0.00 0.00 0.00 1.75
135 136 2.083774 CACATACACACCGCCTTGAAT 58.916 47.619 0.00 0.00 0.00 2.57
136 137 1.518325 CACATACACACCGCCTTGAA 58.482 50.000 0.00 0.00 0.00 2.69
137 138 0.321210 CCACATACACACCGCCTTGA 60.321 55.000 0.00 0.00 0.00 3.02
138 139 0.605319 ACCACATACACACCGCCTTG 60.605 55.000 0.00 0.00 0.00 3.61
139 140 0.109723 AACCACATACACACCGCCTT 59.890 50.000 0.00 0.00 0.00 4.35
140 141 0.605319 CAACCACATACACACCGCCT 60.605 55.000 0.00 0.00 0.00 5.52
141 142 1.582610 CCAACCACATACACACCGCC 61.583 60.000 0.00 0.00 0.00 6.13
142 143 0.604243 TCCAACCACATACACACCGC 60.604 55.000 0.00 0.00 0.00 5.68
143 144 1.438651 CTCCAACCACATACACACCG 58.561 55.000 0.00 0.00 0.00 4.94
144 145 1.165270 GCTCCAACCACATACACACC 58.835 55.000 0.00 0.00 0.00 4.16
145 146 1.806542 CTGCTCCAACCACATACACAC 59.193 52.381 0.00 0.00 0.00 3.82
146 147 1.271325 CCTGCTCCAACCACATACACA 60.271 52.381 0.00 0.00 0.00 3.72
147 148 1.271379 ACCTGCTCCAACCACATACAC 60.271 52.381 0.00 0.00 0.00 2.90
148 149 1.064003 ACCTGCTCCAACCACATACA 58.936 50.000 0.00 0.00 0.00 2.29
149 150 1.453155 CACCTGCTCCAACCACATAC 58.547 55.000 0.00 0.00 0.00 2.39
150 151 0.327924 CCACCTGCTCCAACCACATA 59.672 55.000 0.00 0.00 0.00 2.29
151 152 1.075482 CCACCTGCTCCAACCACAT 59.925 57.895 0.00 0.00 0.00 3.21
152 153 2.515398 CCACCTGCTCCAACCACA 59.485 61.111 0.00 0.00 0.00 4.17
153 154 2.985847 GCCACCTGCTCCAACCAC 60.986 66.667 0.00 0.00 36.87 4.16
162 163 3.546714 AACCACCGTAGCCACCTGC 62.547 63.158 0.00 0.00 41.71 4.85
163 164 0.536460 AAAACCACCGTAGCCACCTG 60.536 55.000 0.00 0.00 0.00 4.00
164 165 0.184211 AAAAACCACCGTAGCCACCT 59.816 50.000 0.00 0.00 0.00 4.00
165 166 1.536766 GTAAAAACCACCGTAGCCACC 59.463 52.381 0.00 0.00 0.00 4.61
166 167 1.536766 GGTAAAAACCACCGTAGCCAC 59.463 52.381 0.00 0.00 0.00 5.01
167 168 1.545204 GGGTAAAAACCACCGTAGCCA 60.545 52.381 0.00 0.00 36.89 4.75
168 169 1.167851 GGGTAAAAACCACCGTAGCC 58.832 55.000 0.00 0.00 36.89 3.93
169 170 1.894881 TGGGTAAAAACCACCGTAGC 58.105 50.000 0.00 0.00 36.89 3.58
170 171 3.212685 TGTTGGGTAAAAACCACCGTAG 58.787 45.455 0.00 0.00 37.82 3.51
171 172 3.287867 TGTTGGGTAAAAACCACCGTA 57.712 42.857 0.00 0.00 37.82 4.02
172 173 2.140839 TGTTGGGTAAAAACCACCGT 57.859 45.000 0.00 0.00 37.82 4.83
173 174 2.288518 CCATGTTGGGTAAAAACCACCG 60.289 50.000 0.00 0.00 37.82 4.94
174 175 3.394674 CCATGTTGGGTAAAAACCACC 57.605 47.619 0.00 0.00 37.82 4.61
186 187 0.683828 TATGCTGCCACCCATGTTGG 60.684 55.000 6.28 6.28 37.25 3.77
187 188 1.184431 TTATGCTGCCACCCATGTTG 58.816 50.000 0.00 0.00 0.00 3.33
188 189 2.034124 GATTATGCTGCCACCCATGTT 58.966 47.619 0.00 0.00 0.00 2.71
189 190 1.216175 AGATTATGCTGCCACCCATGT 59.784 47.619 0.00 0.00 0.00 3.21
190 191 1.991121 AGATTATGCTGCCACCCATG 58.009 50.000 0.00 0.00 0.00 3.66
191 192 2.590821 GAAGATTATGCTGCCACCCAT 58.409 47.619 0.00 0.00 0.00 4.00
192 193 1.746861 CGAAGATTATGCTGCCACCCA 60.747 52.381 0.00 0.00 0.00 4.51
193 194 0.947244 CGAAGATTATGCTGCCACCC 59.053 55.000 0.00 0.00 0.00 4.61
194 195 0.947244 CCGAAGATTATGCTGCCACC 59.053 55.000 0.00 0.00 0.00 4.61
195 196 1.953559 TCCGAAGATTATGCTGCCAC 58.046 50.000 0.00 0.00 0.00 5.01
196 197 2.771089 GATCCGAAGATTATGCTGCCA 58.229 47.619 0.00 0.00 30.90 4.92
197 198 1.728971 CGATCCGAAGATTATGCTGCC 59.271 52.381 0.00 0.00 30.90 4.85
198 199 1.728971 CCGATCCGAAGATTATGCTGC 59.271 52.381 0.00 0.00 30.90 5.25
199 200 2.989840 GACCGATCCGAAGATTATGCTG 59.010 50.000 0.00 0.00 30.90 4.41
200 201 2.028930 GGACCGATCCGAAGATTATGCT 60.029 50.000 0.00 0.00 34.48 3.79
201 202 2.338500 GGACCGATCCGAAGATTATGC 58.662 52.381 0.00 0.00 34.48 3.14
212 213 1.345715 AAGGGATGGTGGACCGATCC 61.346 60.000 14.34 14.34 46.48 3.36
213 214 0.179045 CAAGGGATGGTGGACCGATC 60.179 60.000 0.00 0.00 39.43 3.69
214 215 1.915228 CAAGGGATGGTGGACCGAT 59.085 57.895 0.00 0.00 39.43 4.18
215 216 2.966732 GCAAGGGATGGTGGACCGA 61.967 63.158 0.00 0.00 39.43 4.69
216 217 2.438434 GCAAGGGATGGTGGACCG 60.438 66.667 0.00 0.00 39.43 4.79
217 218 2.438434 CGCAAGGGATGGTGGACC 60.438 66.667 0.00 0.00 0.00 4.46
218 219 1.745489 GTCGCAAGGGATGGTGGAC 60.745 63.158 0.00 0.00 38.47 4.02
219 220 1.561769 ATGTCGCAAGGGATGGTGGA 61.562 55.000 0.00 0.00 38.47 4.02
220 221 0.180171 TATGTCGCAAGGGATGGTGG 59.820 55.000 0.00 0.00 38.47 4.61
221 222 1.586422 CTATGTCGCAAGGGATGGTG 58.414 55.000 0.00 0.00 38.47 4.17
222 223 0.469917 CCTATGTCGCAAGGGATGGT 59.530 55.000 0.00 0.00 38.47 3.55
223 224 0.886490 GCCTATGTCGCAAGGGATGG 60.886 60.000 0.00 0.00 33.17 3.51
224 225 0.179048 TGCCTATGTCGCAAGGGATG 60.179 55.000 0.00 0.00 32.05 3.51
225 226 0.767375 ATGCCTATGTCGCAAGGGAT 59.233 50.000 0.00 0.00 40.22 3.85
226 227 1.344438 CTATGCCTATGTCGCAAGGGA 59.656 52.381 0.00 0.00 40.22 4.20
227 228 1.070758 ACTATGCCTATGTCGCAAGGG 59.929 52.381 0.00 0.00 40.22 3.95
228 229 2.138320 CACTATGCCTATGTCGCAAGG 58.862 52.381 0.00 0.00 40.22 3.61
229 230 2.797156 GACACTATGCCTATGTCGCAAG 59.203 50.000 0.00 0.00 40.22 4.01
230 231 2.821546 GACACTATGCCTATGTCGCAA 58.178 47.619 0.00 0.00 40.22 4.85
231 232 2.509052 GACACTATGCCTATGTCGCA 57.491 50.000 0.00 0.00 41.28 5.10
234 235 2.623889 AGACCGACACTATGCCTATGTC 59.376 50.000 0.00 0.00 39.50 3.06
235 236 2.667470 AGACCGACACTATGCCTATGT 58.333 47.619 0.00 0.00 0.00 2.29
236 237 5.066634 CCTATAGACCGACACTATGCCTATG 59.933 48.000 0.00 0.00 33.43 2.23
237 238 5.045066 TCCTATAGACCGACACTATGCCTAT 60.045 44.000 0.00 0.00 33.43 2.57
238 239 4.287845 TCCTATAGACCGACACTATGCCTA 59.712 45.833 0.00 0.00 33.43 3.93
239 240 3.074094 TCCTATAGACCGACACTATGCCT 59.926 47.826 0.00 0.00 33.43 4.75
240 241 3.190953 GTCCTATAGACCGACACTATGCC 59.809 52.174 0.00 0.00 39.84 4.40
241 242 4.422546 GTCCTATAGACCGACACTATGC 57.577 50.000 0.00 0.00 39.84 3.14
252 253 3.747529 GGCGACAGTAGAGTCCTATAGAC 59.252 52.174 0.00 0.00 46.71 2.59
253 254 3.554544 CGGCGACAGTAGAGTCCTATAGA 60.555 52.174 0.00 0.00 35.07 1.98
254 255 2.737783 CGGCGACAGTAGAGTCCTATAG 59.262 54.545 0.00 0.00 35.07 1.31
255 256 2.366590 TCGGCGACAGTAGAGTCCTATA 59.633 50.000 4.99 0.00 35.07 1.31
256 257 1.140452 TCGGCGACAGTAGAGTCCTAT 59.860 52.381 4.99 0.00 35.07 2.57
257 258 0.538584 TCGGCGACAGTAGAGTCCTA 59.461 55.000 4.99 0.00 35.07 2.94
258 259 0.107116 ATCGGCGACAGTAGAGTCCT 60.107 55.000 13.76 0.00 35.07 3.85
259 260 0.739561 AATCGGCGACAGTAGAGTCC 59.260 55.000 13.76 0.00 35.07 3.85
260 261 2.186076 CAAATCGGCGACAGTAGAGTC 58.814 52.381 13.76 0.00 35.19 3.36
261 262 1.544691 ACAAATCGGCGACAGTAGAGT 59.455 47.619 13.76 1.15 0.00 3.24
262 263 2.159366 AGACAAATCGGCGACAGTAGAG 60.159 50.000 13.76 0.45 0.00 2.43
263 264 1.816835 AGACAAATCGGCGACAGTAGA 59.183 47.619 13.76 0.00 0.00 2.59
264 265 2.279582 AGACAAATCGGCGACAGTAG 57.720 50.000 13.76 3.23 0.00 2.57
265 266 2.736144 AAGACAAATCGGCGACAGTA 57.264 45.000 13.76 0.00 0.00 2.74
266 267 1.878953 AAAGACAAATCGGCGACAGT 58.121 45.000 13.76 11.42 0.00 3.55
267 268 2.969443 AAAAGACAAATCGGCGACAG 57.031 45.000 13.76 7.71 0.00 3.51
286 287 9.243637 CGGAAAGTCTGACAAAATAAATGAAAA 57.756 29.630 10.88 0.00 0.00 2.29
287 288 8.410141 ACGGAAAGTCTGACAAAATAAATGAAA 58.590 29.630 10.88 0.00 0.00 2.69
288 289 7.860373 CACGGAAAGTCTGACAAAATAAATGAA 59.140 33.333 10.88 0.00 0.00 2.57
289 290 7.012894 ACACGGAAAGTCTGACAAAATAAATGA 59.987 33.333 10.88 0.00 0.00 2.57
290 291 7.138736 ACACGGAAAGTCTGACAAAATAAATG 58.861 34.615 10.88 1.65 0.00 2.32
291 292 7.272037 ACACGGAAAGTCTGACAAAATAAAT 57.728 32.000 10.88 0.00 0.00 1.40
292 293 6.687081 ACACGGAAAGTCTGACAAAATAAA 57.313 33.333 10.88 0.00 0.00 1.40
293 294 6.459024 CCAACACGGAAAGTCTGACAAAATAA 60.459 38.462 10.88 0.00 36.56 1.40
294 295 5.008217 CCAACACGGAAAGTCTGACAAAATA 59.992 40.000 10.88 0.00 36.56 1.40
295 296 4.202010 CCAACACGGAAAGTCTGACAAAAT 60.202 41.667 10.88 0.00 36.56 1.82
296 297 3.127895 CCAACACGGAAAGTCTGACAAAA 59.872 43.478 10.88 0.00 36.56 2.44
297 298 2.680841 CCAACACGGAAAGTCTGACAAA 59.319 45.455 10.88 0.00 36.56 2.83
298 299 2.093394 TCCAACACGGAAAGTCTGACAA 60.093 45.455 10.88 0.00 42.52 3.18
299 300 1.483004 TCCAACACGGAAAGTCTGACA 59.517 47.619 10.88 0.00 42.52 3.58
300 301 2.234300 TCCAACACGGAAAGTCTGAC 57.766 50.000 0.00 0.00 42.52 3.51
309 310 1.522806 GCACACAGTCCAACACGGA 60.523 57.895 0.00 0.00 43.61 4.69
310 311 1.165907 ATGCACACAGTCCAACACGG 61.166 55.000 0.00 0.00 0.00 4.94
311 312 0.662619 AATGCACACAGTCCAACACG 59.337 50.000 0.00 0.00 0.00 4.49
312 313 1.949525 AGAATGCACACAGTCCAACAC 59.050 47.619 0.00 0.00 41.83 3.32
313 314 2.346766 AGAATGCACACAGTCCAACA 57.653 45.000 0.00 0.00 41.83 3.33
314 315 3.403038 ACTAGAATGCACACAGTCCAAC 58.597 45.455 0.00 0.00 41.83 3.77
315 316 3.769739 ACTAGAATGCACACAGTCCAA 57.230 42.857 0.00 0.00 41.83 3.53
316 317 3.769739 AACTAGAATGCACACAGTCCA 57.230 42.857 0.00 0.00 41.83 4.02
317 318 5.725110 CATAACTAGAATGCACACAGTCC 57.275 43.478 0.00 0.00 41.83 3.85
327 328 3.062763 CGGCCTCTGCATAACTAGAATG 58.937 50.000 0.00 0.90 40.13 2.67
328 329 2.037772 CCGGCCTCTGCATAACTAGAAT 59.962 50.000 0.00 0.00 40.13 2.40
329 330 1.412710 CCGGCCTCTGCATAACTAGAA 59.587 52.381 0.00 0.00 40.13 2.10
330 331 1.040646 CCGGCCTCTGCATAACTAGA 58.959 55.000 0.00 0.00 40.13 2.43
331 332 0.034059 CCCGGCCTCTGCATAACTAG 59.966 60.000 0.00 0.00 40.13 2.57
332 333 0.689745 ACCCGGCCTCTGCATAACTA 60.690 55.000 0.00 0.00 40.13 2.24
333 334 1.995626 ACCCGGCCTCTGCATAACT 60.996 57.895 0.00 0.00 40.13 2.24
334 335 1.819632 CACCCGGCCTCTGCATAAC 60.820 63.158 0.00 0.00 40.13 1.89
335 336 1.847798 AACACCCGGCCTCTGCATAA 61.848 55.000 0.00 0.00 40.13 1.90
336 337 0.978667 TAACACCCGGCCTCTGCATA 60.979 55.000 0.00 0.00 40.13 3.14
337 338 2.297895 TAACACCCGGCCTCTGCAT 61.298 57.895 0.00 0.00 40.13 3.96
338 339 2.925706 TAACACCCGGCCTCTGCA 60.926 61.111 0.00 0.00 40.13 4.41
339 340 2.436115 GTAACACCCGGCCTCTGC 60.436 66.667 0.00 0.00 0.00 4.26
340 341 1.218316 GAGTAACACCCGGCCTCTG 59.782 63.158 0.00 0.00 0.00 3.35
341 342 0.617820 ATGAGTAACACCCGGCCTCT 60.618 55.000 0.00 0.00 0.00 3.69
342 343 1.117150 TATGAGTAACACCCGGCCTC 58.883 55.000 0.00 0.00 0.00 4.70
343 344 1.575419 TTATGAGTAACACCCGGCCT 58.425 50.000 0.00 0.00 0.00 5.19
344 345 2.218603 CATTATGAGTAACACCCGGCC 58.781 52.381 0.00 0.00 0.00 6.13
345 346 1.602377 GCATTATGAGTAACACCCGGC 59.398 52.381 0.00 0.00 0.00 6.13
346 347 3.194005 AGCATTATGAGTAACACCCGG 57.806 47.619 0.00 0.00 0.00 5.73
347 348 4.394920 ACAAAGCATTATGAGTAACACCCG 59.605 41.667 0.00 0.00 0.00 5.28
348 349 5.897377 ACAAAGCATTATGAGTAACACCC 57.103 39.130 0.00 0.00 0.00 4.61
349 350 7.518370 CGGATACAAAGCATTATGAGTAACACC 60.518 40.741 0.00 0.00 0.00 4.16
350 351 7.345192 CGGATACAAAGCATTATGAGTAACAC 58.655 38.462 0.00 0.00 0.00 3.32
351 352 6.018262 GCGGATACAAAGCATTATGAGTAACA 60.018 38.462 0.00 0.00 0.00 2.41
352 353 6.202954 AGCGGATACAAAGCATTATGAGTAAC 59.797 38.462 0.00 0.00 0.00 2.50
353 354 6.288294 AGCGGATACAAAGCATTATGAGTAA 58.712 36.000 0.00 0.00 0.00 2.24
354 355 5.853936 AGCGGATACAAAGCATTATGAGTA 58.146 37.500 0.00 0.00 0.00 2.59
355 356 4.708177 AGCGGATACAAAGCATTATGAGT 58.292 39.130 0.00 0.00 0.00 3.41
356 357 5.237127 TCAAGCGGATACAAAGCATTATGAG 59.763 40.000 0.00 0.00 0.00 2.90
357 358 5.122519 TCAAGCGGATACAAAGCATTATGA 58.877 37.500 0.00 0.00 0.00 2.15
358 359 5.422666 TCAAGCGGATACAAAGCATTATG 57.577 39.130 0.00 0.00 0.00 1.90
359 360 5.563475 GCATCAAGCGGATACAAAGCATTAT 60.563 40.000 0.00 0.00 33.95 1.28
360 361 4.261155 GCATCAAGCGGATACAAAGCATTA 60.261 41.667 0.00 0.00 33.95 1.90
361 362 3.489738 GCATCAAGCGGATACAAAGCATT 60.490 43.478 0.00 0.00 33.95 3.56
362 363 2.033801 GCATCAAGCGGATACAAAGCAT 59.966 45.455 0.00 0.00 33.95 3.79
363 364 1.401552 GCATCAAGCGGATACAAAGCA 59.598 47.619 0.00 0.00 33.95 3.91
364 365 2.111041 GCATCAAGCGGATACAAAGC 57.889 50.000 0.00 0.00 33.95 3.51
382 383 9.974750 GGTGCTTTTATTATCTCGAAATATAGC 57.025 33.333 11.94 11.94 32.73 2.97
385 386 9.574516 AAGGGTGCTTTTATTATCTCGAAATAT 57.425 29.630 0.00 0.00 0.00 1.28
386 387 8.974060 AAGGGTGCTTTTATTATCTCGAAATA 57.026 30.769 0.00 0.00 0.00 1.40
387 388 7.881775 AAGGGTGCTTTTATTATCTCGAAAT 57.118 32.000 0.00 0.00 0.00 2.17
388 389 7.696992 AAAGGGTGCTTTTATTATCTCGAAA 57.303 32.000 0.00 0.00 0.00 3.46
389 390 8.974060 ATAAAGGGTGCTTTTATTATCTCGAA 57.026 30.769 0.00 0.00 28.87 3.71
390 391 7.384115 CGATAAAGGGTGCTTTTATTATCTCGA 59.616 37.037 0.00 0.00 32.42 4.04
391 392 7.384115 TCGATAAAGGGTGCTTTTATTATCTCG 59.616 37.037 0.00 0.00 32.42 4.04
392 393 8.603242 TCGATAAAGGGTGCTTTTATTATCTC 57.397 34.615 0.00 0.00 32.42 2.75
393 394 8.974060 TTCGATAAAGGGTGCTTTTATTATCT 57.026 30.769 0.00 0.00 32.42 1.98
396 397 9.849166 CTTTTTCGATAAAGGGTGCTTTTATTA 57.151 29.630 17.56 0.00 32.42 0.98
397 398 7.817478 CCTTTTTCGATAAAGGGTGCTTTTATT 59.183 33.333 29.46 0.00 46.81 1.40
398 399 7.320399 CCTTTTTCGATAAAGGGTGCTTTTAT 58.680 34.615 29.46 0.00 46.81 1.40
399 400 6.683715 CCTTTTTCGATAAAGGGTGCTTTTA 58.316 36.000 29.46 0.00 46.81 1.52
400 401 5.538118 CCTTTTTCGATAAAGGGTGCTTTT 58.462 37.500 29.46 0.00 46.81 2.27
401 402 5.134202 CCTTTTTCGATAAAGGGTGCTTT 57.866 39.130 29.46 0.00 46.81 3.51
402 403 4.783764 CCTTTTTCGATAAAGGGTGCTT 57.216 40.909 29.46 0.00 46.81 3.91
411 412 8.658609 CCGTAATTTGTACTCCTTTTTCGATAA 58.341 33.333 0.00 0.00 0.00 1.75
412 413 8.034215 TCCGTAATTTGTACTCCTTTTTCGATA 58.966 33.333 0.00 0.00 0.00 2.92
413 414 6.875195 TCCGTAATTTGTACTCCTTTTTCGAT 59.125 34.615 0.00 0.00 0.00 3.59
414 415 6.146021 GTCCGTAATTTGTACTCCTTTTTCGA 59.854 38.462 0.00 0.00 0.00 3.71
415 416 6.301861 GTCCGTAATTTGTACTCCTTTTTCG 58.698 40.000 0.00 0.00 0.00 3.46
416 417 6.429078 AGGTCCGTAATTTGTACTCCTTTTTC 59.571 38.462 0.00 0.00 0.00 2.29
417 418 6.206048 CAGGTCCGTAATTTGTACTCCTTTTT 59.794 38.462 0.00 0.00 0.00 1.94
418 419 5.704053 CAGGTCCGTAATTTGTACTCCTTTT 59.296 40.000 0.00 0.00 0.00 2.27
419 420 5.221783 ACAGGTCCGTAATTTGTACTCCTTT 60.222 40.000 0.00 0.00 0.00 3.11
420 421 4.285260 ACAGGTCCGTAATTTGTACTCCTT 59.715 41.667 0.00 0.00 0.00 3.36
435 436 5.009710 TGCATAAATCTAGACTACAGGTCCG 59.990 44.000 0.00 0.00 45.54 4.79
500 508 6.060028 ACAATCCACAACATATATTGACGC 57.940 37.500 0.00 0.00 32.99 5.19
576 592 7.008332 TGCTAAGGCTATCATACAGGTACTTA 58.992 38.462 0.00 0.00 36.21 2.24
578 594 5.394738 TGCTAAGGCTATCATACAGGTACT 58.605 41.667 0.00 0.00 38.39 2.73
579 595 5.723672 TGCTAAGGCTATCATACAGGTAC 57.276 43.478 0.00 0.00 39.59 3.34
580 596 7.410991 TCTATGCTAAGGCTATCATACAGGTA 58.589 38.462 0.00 0.00 39.59 3.08
582 598 6.782082 TCTATGCTAAGGCTATCATACAGG 57.218 41.667 0.00 0.00 39.59 4.00
583 599 8.473219 TCAATCTATGCTAAGGCTATCATACAG 58.527 37.037 0.00 0.00 39.59 2.74
623 639 3.383620 TTAAACGAGAAGGTGGCGTTA 57.616 42.857 0.00 0.00 46.15 3.18
640 656 5.210430 TGGAACCGATGGGAGTAGTATTAA 58.790 41.667 0.00 0.00 36.97 1.40
651 667 4.490743 GTTTGTATTTTGGAACCGATGGG 58.509 43.478 0.00 0.00 40.11 4.00
715 731 3.622612 TGATGTTGTAATCATGGACTGCG 59.377 43.478 0.00 0.00 31.58 5.18
717 733 6.930667 TGATGATGTTGTAATCATGGACTG 57.069 37.500 4.48 0.00 45.27 3.51
797 822 3.602483 GCAAATAACCCCTCGAAGTACA 58.398 45.455 0.00 0.00 0.00 2.90
849 877 8.782339 AGCCAATCCTTTTAAAAATTGATCTG 57.218 30.769 19.89 13.21 32.14 2.90
903 1766 1.425412 TCTGGAGCGCTTAAAACGTC 58.575 50.000 13.26 0.00 0.00 4.34
930 1793 6.765036 TCTGCTTTATAGGCTTTGAGAATGAG 59.235 38.462 0.00 0.00 0.00 2.90
931 1794 6.653020 TCTGCTTTATAGGCTTTGAGAATGA 58.347 36.000 0.00 0.00 0.00 2.57
932 1795 6.932356 TCTGCTTTATAGGCTTTGAGAATG 57.068 37.500 0.00 0.00 0.00 2.67
933 1796 7.831193 TCTTTCTGCTTTATAGGCTTTGAGAAT 59.169 33.333 0.00 0.00 0.00 2.40
934 1797 7.168219 TCTTTCTGCTTTATAGGCTTTGAGAA 58.832 34.615 0.00 0.00 0.00 2.87
935 1798 6.711277 TCTTTCTGCTTTATAGGCTTTGAGA 58.289 36.000 0.00 0.00 0.00 3.27
1023 1896 0.034896 TCTTGGACAAGGACGGCTTC 59.965 55.000 11.76 0.00 38.88 3.86
1643 2558 1.725164 GATCGAGTCAACGGTGGAAAC 59.275 52.381 0.00 0.00 0.00 2.78
1678 2593 4.240096 CATGGTTGTCAAGCAAAATCCTC 58.760 43.478 20.49 0.00 42.83 3.71
1712 2627 5.468746 ACGAAGAAACTAATTACTGCTTGCA 59.531 36.000 0.00 0.00 0.00 4.08
1857 2775 1.222766 ACCGTACATCAACGCGCAAA 61.223 50.000 5.73 0.00 41.51 3.68
1869 2787 7.334671 TCAAATGAGCAAATGTAATACCGTACA 59.665 33.333 0.00 0.00 38.32 2.90
1900 2826 5.558818 TGCTTGATTGGCCAAATAAATTGT 58.441 33.333 24.71 2.23 37.32 2.71
1901 2827 6.149807 ACTTGCTTGATTGGCCAAATAAATTG 59.850 34.615 24.71 11.87 38.84 2.32
1918 2846 7.811236 AGAAACATTCATGAACATACTTGCTTG 59.189 33.333 11.07 3.59 0.00 4.01
1943 2871 7.390027 TCTTTCCAAAGGAGAAACATAGAGAG 58.610 38.462 0.00 0.00 36.67 3.20
1952 2880 6.382570 TGTCCAATTTCTTTCCAAAGGAGAAA 59.617 34.615 0.00 0.00 41.87 2.52
1973 2901 6.098409 TGTCTCCCTGAGATTAATAAGTGTCC 59.902 42.308 0.00 0.00 40.98 4.02
1979 2907 6.767902 GCATGTTGTCTCCCTGAGATTAATAA 59.232 38.462 0.00 0.00 40.98 1.40
1981 2909 5.128919 GCATGTTGTCTCCCTGAGATTAAT 58.871 41.667 0.00 0.00 40.98 1.40
1988 2953 0.036732 GGTGCATGTTGTCTCCCTGA 59.963 55.000 0.00 0.00 0.00 3.86
1992 2957 2.119801 ATCTGGTGCATGTTGTCTCC 57.880 50.000 0.00 0.00 0.00 3.71
1999 2964 5.830799 TGAATCCTATATCTGGTGCATGT 57.169 39.130 0.00 0.00 0.00 3.21
2006 2971 8.979195 TCCCCATATATGAATCCTATATCTGG 57.021 38.462 14.54 2.03 35.84 3.86
2022 3153 8.489676 TGTACCGTACTAAAATTCCCCATATA 57.510 34.615 10.03 0.00 0.00 0.86
2023 3154 7.377696 TGTACCGTACTAAAATTCCCCATAT 57.622 36.000 10.03 0.00 0.00 1.78
2024 3155 6.805016 TGTACCGTACTAAAATTCCCCATA 57.195 37.500 10.03 0.00 0.00 2.74
2041 3183 7.528481 TTTTGTGCTAGTTACATATGTACCG 57.472 36.000 15.20 5.51 0.00 4.02
2048 3193 9.856488 TTGTTTTGTTTTTGTGCTAGTTACATA 57.144 25.926 3.35 0.00 0.00 2.29
2049 3194 8.764524 TTGTTTTGTTTTTGTGCTAGTTACAT 57.235 26.923 3.35 0.00 0.00 2.29
2050 3195 8.589335 TTTGTTTTGTTTTTGTGCTAGTTACA 57.411 26.923 0.00 0.00 0.00 2.41
2072 3217 9.793245 CGAGAAACAGTACTAGTTACAATTTTG 57.207 33.333 0.00 0.00 32.41 2.44
2075 3220 8.355169 TGACGAGAAACAGTACTAGTTACAATT 58.645 33.333 0.00 0.00 32.41 2.32
2077 3222 7.263100 TGACGAGAAACAGTACTAGTTACAA 57.737 36.000 0.00 0.00 32.41 2.41
2078 3223 6.866010 TGACGAGAAACAGTACTAGTTACA 57.134 37.500 0.00 0.00 32.41 2.41
2079 3224 8.566008 TTTTGACGAGAAACAGTACTAGTTAC 57.434 34.615 0.00 0.00 0.00 2.50
2080 3225 9.241317 CTTTTTGACGAGAAACAGTACTAGTTA 57.759 33.333 0.00 0.00 0.00 2.24
2081 3226 7.977853 TCTTTTTGACGAGAAACAGTACTAGTT 59.022 33.333 0.00 0.00 0.00 2.24
2082 3227 7.486647 TCTTTTTGACGAGAAACAGTACTAGT 58.513 34.615 0.00 0.00 0.00 2.57
2083 3228 7.925703 TCTTTTTGACGAGAAACAGTACTAG 57.074 36.000 0.00 0.00 0.00 2.57
2084 3229 8.192774 TCTTCTTTTTGACGAGAAACAGTACTA 58.807 33.333 0.00 0.00 31.99 1.82
2140 3312 5.473066 AAGGAAAATTCATCTGGTTGGTG 57.527 39.130 0.00 0.00 0.00 4.17
2241 3413 4.328169 AGCAAAGACGCGTAATAAAGTACC 59.672 41.667 13.97 0.00 36.85 3.34
2243 3415 5.287752 CAGAGCAAAGACGCGTAATAAAGTA 59.712 40.000 13.97 0.00 36.85 2.24
2248 3420 2.536365 CCAGAGCAAAGACGCGTAATA 58.464 47.619 13.97 0.00 36.85 0.98
2260 3432 3.687698 GCGATAAACTTAACCCAGAGCAA 59.312 43.478 0.00 0.00 0.00 3.91
2265 3437 3.181500 GGCTTGCGATAAACTTAACCCAG 60.181 47.826 0.00 0.00 0.00 4.45
2268 3440 4.095782 TGATGGCTTGCGATAAACTTAACC 59.904 41.667 0.00 0.00 0.00 2.85
2278 3450 1.108776 ATTGCTTGATGGCTTGCGAT 58.891 45.000 0.00 0.00 0.00 4.58
2322 3494 1.747709 CTCCAATCCTCCAGTGCTTG 58.252 55.000 0.00 0.00 0.00 4.01
2328 3500 1.045350 TCCTCGCTCCAATCCTCCAG 61.045 60.000 0.00 0.00 0.00 3.86
2329 3501 0.617535 TTCCTCGCTCCAATCCTCCA 60.618 55.000 0.00 0.00 0.00 3.86
2337 3509 1.070786 GTGGTTGTTCCTCGCTCCA 59.929 57.895 0.00 0.00 37.07 3.86
2341 3513 1.464997 GATCTTGTGGTTGTTCCTCGC 59.535 52.381 0.00 0.00 37.07 5.03
2391 3570 3.107642 ACACAACCCTAAAGACTGACG 57.892 47.619 0.00 0.00 0.00 4.35
2451 3630 2.354199 GCTGCATTCTGAGCTTCTAACC 59.646 50.000 0.00 0.00 32.12 2.85
2503 3682 7.632721 TGAACGAAGGATAAAACTTACAACAC 58.367 34.615 0.00 0.00 0.00 3.32
2508 3687 9.750882 GTAACATGAACGAAGGATAAAACTTAC 57.249 33.333 0.00 0.00 0.00 2.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.