Multiple sequence alignment - TraesCS4D01G171800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G171800 chr4D 100.000 3940 0 0 1 3940 298895325 298899264 0.000000e+00 7276.0
1 TraesCS4D01G171800 chr4D 88.256 579 60 6 1 574 418513129 418513704 0.000000e+00 686.0
2 TraesCS4D01G171800 chr4D 75.595 336 67 14 3451 3779 398564834 398565161 6.820000e-33 152.0
3 TraesCS4D01G171800 chr4A 92.228 2599 102 24 614 3169 186698670 186696129 0.000000e+00 3589.0
4 TraesCS4D01G171800 chr4A 86.792 159 14 2 3180 3338 186695043 186694892 1.880000e-38 171.0
5 TraesCS4D01G171800 chr4B 92.815 1879 56 32 1494 3317 370888406 370890260 0.000000e+00 2649.0
6 TraesCS4D01G171800 chr4B 94.087 761 21 8 676 1423 370887566 370888315 0.000000e+00 1134.0
7 TraesCS4D01G171800 chr5D 95.041 605 21 6 1 598 371467520 371468122 0.000000e+00 942.0
8 TraesCS4D01G171800 chr2B 94.380 605 25 8 1 598 29759137 29759739 0.000000e+00 920.0
9 TraesCS4D01G171800 chr2D 95.464 485 16 5 1 481 516362737 516362255 0.000000e+00 769.0
10 TraesCS4D01G171800 chr2D 89.356 357 18 7 247 598 605620562 605620903 7.820000e-117 431.0
11 TraesCS4D01G171800 chr2D 95.582 249 10 1 1 249 605620153 605620400 7.930000e-107 398.0
12 TraesCS4D01G171800 chr6A 92.570 498 32 4 64 557 616347433 616346937 0.000000e+00 710.0
13 TraesCS4D01G171800 chr6A 88.127 598 50 14 5 597 595500245 595499664 0.000000e+00 691.0
14 TraesCS4D01G171800 chr6A 87.000 500 54 9 105 598 603370960 603371454 1.600000e-153 553.0
15 TraesCS4D01G171800 chr7A 88.449 606 43 12 1 598 728016873 728017459 0.000000e+00 706.0
16 TraesCS4D01G171800 chr7A 81.250 128 19 5 3454 3577 264843707 264843833 9.010000e-17 99.0
17 TraesCS4D01G171800 chr6B 87.452 518 51 7 1 516 492863898 492863393 5.670000e-163 584.0
18 TraesCS4D01G171800 chr7D 77.751 409 55 17 3458 3838 478368329 478368729 6.630000e-53 219.0
19 TraesCS4D01G171800 chr7D 79.630 108 21 1 3472 3578 477663140 477663033 4.220000e-10 76.8
20 TraesCS4D01G171800 chr7D 86.667 60 8 0 3658 3717 438600736 438600677 2.540000e-07 67.6
21 TraesCS4D01G171800 chr1D 76.049 405 76 10 3452 3838 203458280 203458681 1.450000e-44 191.0
22 TraesCS4D01G171800 chr2A 78.862 246 31 14 1 239 35581397 35581628 3.170000e-31 147.0
23 TraesCS4D01G171800 chr2A 79.545 176 35 1 3663 3838 608510482 608510308 1.490000e-24 124.0
24 TraesCS4D01G171800 chr1A 82.051 156 26 2 3654 3808 8680153 8680307 8.880000e-27 132.0
25 TraesCS4D01G171800 chr1A 82.353 102 14 3 3465 3565 127055521 127055619 7.010000e-13 86.1
26 TraesCS4D01G171800 chrUn 83.453 139 20 3 1 138 63265187 63265323 4.130000e-25 126.0
27 TraesCS4D01G171800 chr3B 82.576 132 23 0 3700 3831 2138532 2138663 2.490000e-22 117.0
28 TraesCS4D01G171800 chr3B 82.927 82 10 1 520 597 810652918 810652999 1.960000e-08 71.3
29 TraesCS4D01G171800 chr3A 83.529 85 10 4 1 85 35404061 35404141 4.220000e-10 76.8
30 TraesCS4D01G171800 chr3A 100.000 28 0 0 3534 3561 583551992 583552019 7.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G171800 chr4D 298895325 298899264 3939 False 7276.0 7276 100.000 1 3940 1 chr4D.!!$F1 3939
1 TraesCS4D01G171800 chr4D 418513129 418513704 575 False 686.0 686 88.256 1 574 1 chr4D.!!$F3 573
2 TraesCS4D01G171800 chr4A 186694892 186698670 3778 True 1880.0 3589 89.510 614 3338 2 chr4A.!!$R1 2724
3 TraesCS4D01G171800 chr4B 370887566 370890260 2694 False 1891.5 2649 93.451 676 3317 2 chr4B.!!$F1 2641
4 TraesCS4D01G171800 chr5D 371467520 371468122 602 False 942.0 942 95.041 1 598 1 chr5D.!!$F1 597
5 TraesCS4D01G171800 chr2B 29759137 29759739 602 False 920.0 920 94.380 1 598 1 chr2B.!!$F1 597
6 TraesCS4D01G171800 chr2D 605620153 605620903 750 False 414.5 431 92.469 1 598 2 chr2D.!!$F1 597
7 TraesCS4D01G171800 chr6A 595499664 595500245 581 True 691.0 691 88.127 5 597 1 chr6A.!!$R1 592
8 TraesCS4D01G171800 chr7A 728016873 728017459 586 False 706.0 706 88.449 1 598 1 chr7A.!!$F2 597
9 TraesCS4D01G171800 chr6B 492863393 492863898 505 True 584.0 584 87.452 1 516 1 chr6B.!!$R1 515

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
651 832 0.640768 CAAGCGTTCGATCGGTCTTC 59.359 55.0 19.57 2.12 40.62 2.87 F
1706 1927 0.761187 ATCAGGTCATGCGTATGCCT 59.239 50.0 18.63 18.63 39.69 4.75 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2090 2351 0.396435 TTCTCCCACATCACGCTTGT 59.604 50.0 0.0 0.0 0.00 3.16 R
3438 4795 0.034337 GCACCACGAAGTAACCCAGA 59.966 55.0 0.0 0.0 41.61 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 4.361451 AAGAAGCAATGAATTAGTGGCG 57.639 40.909 0.00 0.00 0.00 5.69
497 675 1.308069 CCCAGCCCAAATCAGACACG 61.308 60.000 0.00 0.00 0.00 4.49
574 755 6.940298 TCAGAAAAATCGACTGACCCTAATTT 59.060 34.615 0.00 0.00 36.04 1.82
627 808 4.023963 GCTAAAGTGAAACCTCTCACAACC 60.024 45.833 6.51 0.00 46.81 3.77
629 810 1.843851 AGTGAAACCTCTCACAACCCA 59.156 47.619 6.51 0.00 46.81 4.51
635 816 1.134098 ACCTCTCACAACCCACACAAG 60.134 52.381 0.00 0.00 0.00 3.16
651 832 0.640768 CAAGCGTTCGATCGGTCTTC 59.359 55.000 19.57 2.12 40.62 2.87
697 878 5.616383 CACTTATACTCGATCTTTCGTCGAC 59.384 44.000 5.18 5.18 45.65 4.20
721 902 1.355005 GAGGCAAGAAGAGTCTTCGC 58.645 55.000 23.82 21.24 42.45 4.70
743 924 0.877071 CAAGCACTAGCACACTTGGG 59.123 55.000 6.70 0.00 45.49 4.12
790 971 2.501610 GACCTGCGTCCTCATCCC 59.498 66.667 0.00 0.00 32.40 3.85
970 1161 3.353836 GCCGGCGTGCAAGAAGAA 61.354 61.111 12.58 0.00 0.00 2.52
972 1163 1.667830 CCGGCGTGCAAGAAGAAGA 60.668 57.895 6.01 0.00 0.00 2.87
1438 1638 0.908910 ATACCGATCCAACCACTGCA 59.091 50.000 0.00 0.00 0.00 4.41
1443 1643 1.577328 GATCCAACCACTGCACACCG 61.577 60.000 0.00 0.00 0.00 4.94
1706 1927 0.761187 ATCAGGTCATGCGTATGCCT 59.239 50.000 18.63 18.63 39.69 4.75
1840 2073 2.764637 CTTGGTGGGGGAGGGAAACG 62.765 65.000 0.00 0.00 0.00 3.60
1892 2125 2.839486 TTCTTGTCACCGCTCTCAAT 57.161 45.000 0.00 0.00 0.00 2.57
1957 2203 1.876497 AATTCACACGCATGGCACCC 61.876 55.000 0.00 0.00 0.00 4.61
1964 2210 1.821759 CGCATGGCACCCGGATTAA 60.822 57.895 0.73 0.00 0.00 1.40
1969 2215 2.516227 TGGCACCCGGATTAATTTGA 57.484 45.000 0.73 0.00 0.00 2.69
1997 2243 6.533730 TCATGTCTTGTATTCAGACCACTTT 58.466 36.000 0.00 0.00 0.00 2.66
2009 2255 2.036733 AGACCACTTTCGACGAATTGGA 59.963 45.455 30.96 11.39 32.59 3.53
2026 2272 4.627284 TTGGAAAGAATCTTACCCGTGA 57.373 40.909 0.00 0.00 0.00 4.35
2027 2273 4.627284 TGGAAAGAATCTTACCCGTGAA 57.373 40.909 0.00 0.00 0.00 3.18
2029 2275 4.758165 TGGAAAGAATCTTACCCGTGAAAC 59.242 41.667 0.00 0.00 0.00 2.78
2031 2277 4.635699 AAGAATCTTACCCGTGAAACCT 57.364 40.909 0.00 0.00 0.00 3.50
2032 2278 4.203654 AGAATCTTACCCGTGAAACCTC 57.796 45.455 0.00 0.00 0.00 3.85
2033 2279 3.838903 AGAATCTTACCCGTGAAACCTCT 59.161 43.478 0.00 0.00 0.00 3.69
2090 2351 1.280133 CAAAGAGCATGGACAGGGAGA 59.720 52.381 0.00 0.00 0.00 3.71
2092 2353 0.252421 AGAGCATGGACAGGGAGACA 60.252 55.000 0.00 0.00 0.00 3.41
2152 2413 2.607750 GACCAGTGGGGAGAGGCA 60.608 66.667 15.21 0.00 41.15 4.75
2165 2426 2.704193 GAGGCAACGACGACGAACG 61.704 63.158 15.32 9.70 45.89 3.95
2352 2625 0.885879 TCGACAAGCACGACTACCAT 59.114 50.000 0.00 0.00 34.85 3.55
2427 2700 4.261155 CGTTTTTGCTCTTCTGAACCATCA 60.261 41.667 0.00 0.00 0.00 3.07
2440 2713 2.315925 ACCATCAATCAGCGTGGTAG 57.684 50.000 0.00 0.00 42.85 3.18
2827 3107 2.615493 GCGTCCCTGAGAAGGAATTGAA 60.615 50.000 0.00 0.00 34.43 2.69
2831 3111 3.264450 TCCCTGAGAAGGAATTGAAGGAC 59.736 47.826 0.00 0.00 0.00 3.85
2835 3115 3.323691 TGAGAAGGAATTGAAGGACGTGA 59.676 43.478 0.00 0.00 0.00 4.35
2892 3172 2.066999 CCGGAGAAGGAGAAGGGGG 61.067 68.421 0.00 0.00 0.00 5.40
3070 3352 2.809119 TGTGTTTCAGTGTTTGTGTCGT 59.191 40.909 0.00 0.00 0.00 4.34
3071 3353 3.160545 GTGTTTCAGTGTTTGTGTCGTG 58.839 45.455 0.00 0.00 0.00 4.35
3072 3354 2.809119 TGTTTCAGTGTTTGTGTCGTGT 59.191 40.909 0.00 0.00 0.00 4.49
3073 3355 3.120477 TGTTTCAGTGTTTGTGTCGTGTC 60.120 43.478 0.00 0.00 0.00 3.67
3074 3356 1.273688 TCAGTGTTTGTGTCGTGTCG 58.726 50.000 0.00 0.00 0.00 4.35
3075 3357 0.315059 CAGTGTTTGTGTCGTGTCGC 60.315 55.000 0.00 0.00 0.00 5.19
3077 3359 1.202203 GTGTTTGTGTCGTGTCGCTA 58.798 50.000 0.00 0.00 0.00 4.26
3099 3381 4.690122 AGTGTGTGTTGTGTTCTAGTACC 58.310 43.478 0.00 0.00 0.00 3.34
3146 3428 7.287950 GCGTCGTCAATAAATAAAGATGCATA 58.712 34.615 0.00 0.00 38.56 3.14
3251 4608 2.946329 TGCAAACAATGTACAACCTCGT 59.054 40.909 0.00 0.00 0.00 4.18
3269 4626 3.447742 TCGTCACCGAATCATTCATCAG 58.552 45.455 0.00 0.00 40.86 2.90
3308 4665 2.047179 GCTCCTGTCCCAACCGAC 60.047 66.667 0.00 0.00 0.00 4.79
3320 4677 2.747446 CCCAACCGACATGAAAGTAAGG 59.253 50.000 0.00 0.00 0.00 2.69
3328 4685 4.681781 CGACATGAAAGTAAGGGCATCTCT 60.682 45.833 0.00 0.00 0.00 3.10
3330 4687 6.506538 ACATGAAAGTAAGGGCATCTCTAT 57.493 37.500 0.00 0.00 0.00 1.98
3335 4692 1.066787 GTAAGGGCATCTCTATCCGCC 60.067 57.143 0.00 0.00 44.10 6.13
3338 4695 2.217038 GGCATCTCTATCCGCCCCA 61.217 63.158 0.00 0.00 38.67 4.96
3339 4696 1.754745 GCATCTCTATCCGCCCCAA 59.245 57.895 0.00 0.00 0.00 4.12
3340 4697 0.603975 GCATCTCTATCCGCCCCAAC 60.604 60.000 0.00 0.00 0.00 3.77
3341 4698 0.319900 CATCTCTATCCGCCCCAACG 60.320 60.000 0.00 0.00 0.00 4.10
3342 4699 2.100879 ATCTCTATCCGCCCCAACGC 62.101 60.000 0.00 0.00 0.00 4.84
3343 4700 3.809374 CTCTATCCGCCCCAACGCC 62.809 68.421 0.00 0.00 0.00 5.68
3360 4717 3.384927 CGAACGGCGGAAGACATC 58.615 61.111 13.24 0.00 41.50 3.06
3361 4718 2.165301 CGAACGGCGGAAGACATCC 61.165 63.158 13.24 0.00 45.57 3.51
3371 4728 2.832672 GAAGACATCCAATGCGGTTC 57.167 50.000 0.00 0.00 35.57 3.62
3372 4729 2.359900 GAAGACATCCAATGCGGTTCT 58.640 47.619 0.00 0.00 35.57 3.01
3373 4730 1.742761 AGACATCCAATGCGGTTCTG 58.257 50.000 0.00 0.00 35.57 3.02
3374 4731 1.003580 AGACATCCAATGCGGTTCTGT 59.996 47.619 0.00 0.00 35.57 3.41
3375 4732 2.236146 AGACATCCAATGCGGTTCTGTA 59.764 45.455 0.00 0.00 35.57 2.74
3376 4733 3.118261 AGACATCCAATGCGGTTCTGTAT 60.118 43.478 0.00 0.00 35.57 2.29
3377 4734 3.206150 ACATCCAATGCGGTTCTGTATC 58.794 45.455 0.00 0.00 35.57 2.24
3378 4735 1.934589 TCCAATGCGGTTCTGTATCG 58.065 50.000 0.00 0.00 35.57 2.92
3383 4740 3.044809 GCGGTTCTGTATCGCTTCA 57.955 52.632 4.61 0.00 45.16 3.02
3384 4741 1.355971 GCGGTTCTGTATCGCTTCAA 58.644 50.000 4.61 0.00 45.16 2.69
3385 4742 1.060698 GCGGTTCTGTATCGCTTCAAC 59.939 52.381 4.61 0.00 45.16 3.18
3386 4743 1.320555 CGGTTCTGTATCGCTTCAACG 59.679 52.381 0.00 0.00 0.00 4.10
3387 4744 1.060698 GGTTCTGTATCGCTTCAACGC 59.939 52.381 0.00 0.00 0.00 4.84
3388 4745 1.724623 GTTCTGTATCGCTTCAACGCA 59.275 47.619 0.00 0.00 0.00 5.24
3389 4746 1.629013 TCTGTATCGCTTCAACGCAG 58.371 50.000 0.00 0.00 0.00 5.18
3403 4760 3.267974 GCAGTTCTGGGGCGAAAG 58.732 61.111 1.97 0.00 0.00 2.62
3404 4761 1.302511 GCAGTTCTGGGGCGAAAGA 60.303 57.895 1.97 0.00 0.00 2.52
3405 4762 1.578206 GCAGTTCTGGGGCGAAAGAC 61.578 60.000 1.97 0.00 39.70 3.01
3406 4763 0.250295 CAGTTCTGGGGCGAAAGACA 60.250 55.000 0.00 0.00 45.40 3.41
3411 4768 2.114411 GGGGCGAAAGACACCCAA 59.886 61.111 0.00 0.00 46.21 4.12
3412 4769 2.265904 GGGGCGAAAGACACCCAAC 61.266 63.158 0.00 0.00 46.21 3.77
3413 4770 2.613506 GGGCGAAAGACACCCAACG 61.614 63.158 0.00 0.00 45.40 4.10
3414 4771 2.251371 GCGAAAGACACCCAACGC 59.749 61.111 0.00 0.00 39.33 4.84
3415 4772 2.549282 CGAAAGACACCCAACGCG 59.451 61.111 3.53 3.53 0.00 6.01
3416 4773 2.943653 GAAAGACACCCAACGCGG 59.056 61.111 12.47 0.00 0.00 6.46
3417 4774 1.890510 GAAAGACACCCAACGCGGT 60.891 57.895 12.47 0.00 36.18 5.68
3418 4775 1.441732 GAAAGACACCCAACGCGGTT 61.442 55.000 12.47 0.00 32.17 4.44
3419 4776 1.441732 AAAGACACCCAACGCGGTTC 61.442 55.000 12.47 0.00 32.17 3.62
3420 4777 2.280592 GACACCCAACGCGGTTCT 60.281 61.111 12.47 0.00 32.17 3.01
3421 4778 2.590575 ACACCCAACGCGGTTCTG 60.591 61.111 12.47 0.22 32.17 3.02
3422 4779 2.590575 CACCCAACGCGGTTCTGT 60.591 61.111 12.47 0.00 32.17 3.41
3423 4780 1.301087 CACCCAACGCGGTTCTGTA 60.301 57.895 12.47 0.00 32.17 2.74
3424 4781 0.672401 CACCCAACGCGGTTCTGTAT 60.672 55.000 12.47 0.00 32.17 2.29
3425 4782 0.390735 ACCCAACGCGGTTCTGTATC 60.391 55.000 12.47 0.00 29.19 2.24
3426 4783 1.418342 CCCAACGCGGTTCTGTATCG 61.418 60.000 12.47 0.00 0.00 2.92
3427 4784 1.343821 CAACGCGGTTCTGTATCGC 59.656 57.895 12.47 1.56 45.15 4.58
3428 4785 1.076533 CAACGCGGTTCTGTATCGCT 61.077 55.000 12.47 0.00 46.23 4.93
3429 4786 0.801067 AACGCGGTTCTGTATCGCTC 60.801 55.000 12.47 0.00 46.23 5.03
3430 4787 1.226575 CGCGGTTCTGTATCGCTCA 60.227 57.895 10.12 0.00 46.23 4.26
3431 4788 0.800683 CGCGGTTCTGTATCGCTCAA 60.801 55.000 10.12 0.00 46.23 3.02
3432 4789 0.645868 GCGGTTCTGTATCGCTCAAC 59.354 55.000 4.61 0.00 45.16 3.18
3433 4790 0.914551 CGGTTCTGTATCGCTCAACG 59.085 55.000 0.00 0.00 45.62 4.10
3434 4791 0.645868 GGTTCTGTATCGCTCAACGC 59.354 55.000 0.00 0.00 43.23 4.84
3435 4792 1.346365 GTTCTGTATCGCTCAACGCA 58.654 50.000 0.00 0.00 43.23 5.24
3436 4793 1.321743 GTTCTGTATCGCTCAACGCAG 59.678 52.381 0.00 0.00 43.23 5.18
3450 4807 2.165319 ACGCAGTTCTGGGTTACTTC 57.835 50.000 15.04 0.00 37.78 3.01
3451 4808 1.068474 CGCAGTTCTGGGTTACTTCG 58.932 55.000 8.41 0.00 0.00 3.79
3452 4809 1.604693 CGCAGTTCTGGGTTACTTCGT 60.605 52.381 8.41 0.00 0.00 3.85
3453 4810 1.798813 GCAGTTCTGGGTTACTTCGTG 59.201 52.381 1.97 0.00 0.00 4.35
3454 4811 2.413837 CAGTTCTGGGTTACTTCGTGG 58.586 52.381 0.00 0.00 0.00 4.94
3455 4812 2.044758 AGTTCTGGGTTACTTCGTGGT 58.955 47.619 0.00 0.00 0.00 4.16
3456 4813 2.140717 GTTCTGGGTTACTTCGTGGTG 58.859 52.381 0.00 0.00 0.00 4.17
3457 4814 0.034337 TCTGGGTTACTTCGTGGTGC 59.966 55.000 0.00 0.00 0.00 5.01
3458 4815 1.289109 CTGGGTTACTTCGTGGTGCG 61.289 60.000 0.00 0.00 43.01 5.34
3459 4816 2.030958 GGGTTACTTCGTGGTGCGG 61.031 63.158 0.00 0.00 41.72 5.69
3460 4817 1.301165 GGTTACTTCGTGGTGCGGT 60.301 57.895 0.00 0.00 41.72 5.68
3461 4818 1.562575 GGTTACTTCGTGGTGCGGTG 61.563 60.000 0.00 0.00 41.72 4.94
3462 4819 1.957186 TTACTTCGTGGTGCGGTGC 60.957 57.895 0.00 0.00 41.72 5.01
3477 4834 2.601562 GTGCGGACACGTTTTCTCT 58.398 52.632 0.63 0.00 43.45 3.10
3478 4835 0.507358 GTGCGGACACGTTTTCTCTC 59.493 55.000 0.63 0.00 43.45 3.20
3479 4836 0.937699 TGCGGACACGTTTTCTCTCG 60.938 55.000 0.00 0.00 43.45 4.04
3480 4837 1.773496 CGGACACGTTTTCTCTCGC 59.227 57.895 0.00 0.00 34.81 5.03
3481 4838 0.937699 CGGACACGTTTTCTCTCGCA 60.938 55.000 0.00 0.00 34.81 5.10
3482 4839 1.214367 GGACACGTTTTCTCTCGCAA 58.786 50.000 0.00 0.00 0.00 4.85
3483 4840 1.595794 GGACACGTTTTCTCTCGCAAA 59.404 47.619 0.00 0.00 0.00 3.68
3484 4841 2.599142 GGACACGTTTTCTCTCGCAAAC 60.599 50.000 0.00 0.00 0.00 2.93
3485 4842 2.004017 ACACGTTTTCTCTCGCAAACA 58.996 42.857 0.00 0.00 33.23 2.83
3486 4843 2.030457 ACACGTTTTCTCTCGCAAACAG 59.970 45.455 0.00 0.00 33.23 3.16
3487 4844 2.284150 CACGTTTTCTCTCGCAAACAGA 59.716 45.455 0.00 0.00 33.23 3.41
3488 4845 2.933906 ACGTTTTCTCTCGCAAACAGAA 59.066 40.909 0.00 0.00 33.23 3.02
3489 4846 3.001330 ACGTTTTCTCTCGCAAACAGAAG 59.999 43.478 0.00 0.00 33.23 2.85
3490 4847 3.245284 CGTTTTCTCTCGCAAACAGAAGA 59.755 43.478 0.00 0.00 33.23 2.87
3491 4848 4.519147 GTTTTCTCTCGCAAACAGAAGAC 58.481 43.478 0.00 0.00 33.75 3.01
3492 4849 3.452755 TTCTCTCGCAAACAGAAGACA 57.547 42.857 0.00 0.00 0.00 3.41
3493 4850 3.452755 TCTCTCGCAAACAGAAGACAA 57.547 42.857 0.00 0.00 0.00 3.18
3494 4851 3.792401 TCTCTCGCAAACAGAAGACAAA 58.208 40.909 0.00 0.00 0.00 2.83
3495 4852 4.188462 TCTCTCGCAAACAGAAGACAAAA 58.812 39.130 0.00 0.00 0.00 2.44
3496 4853 4.271049 TCTCTCGCAAACAGAAGACAAAAG 59.729 41.667 0.00 0.00 0.00 2.27
3497 4854 3.938963 TCTCGCAAACAGAAGACAAAAGT 59.061 39.130 0.00 0.00 0.00 2.66
3498 4855 4.014847 TCGCAAACAGAAGACAAAAGTG 57.985 40.909 0.00 0.00 0.00 3.16
3499 4856 3.687212 TCGCAAACAGAAGACAAAAGTGA 59.313 39.130 0.00 0.00 0.00 3.41
3500 4857 4.155099 TCGCAAACAGAAGACAAAAGTGAA 59.845 37.500 0.00 0.00 0.00 3.18
3501 4858 4.496895 CGCAAACAGAAGACAAAAGTGAAG 59.503 41.667 0.00 0.00 0.00 3.02
3502 4859 5.640732 GCAAACAGAAGACAAAAGTGAAGA 58.359 37.500 0.00 0.00 0.00 2.87
3503 4860 5.741040 GCAAACAGAAGACAAAAGTGAAGAG 59.259 40.000 0.00 0.00 0.00 2.85
3504 4861 6.403636 GCAAACAGAAGACAAAAGTGAAGAGA 60.404 38.462 0.00 0.00 0.00 3.10
3505 4862 7.680588 GCAAACAGAAGACAAAAGTGAAGAGAT 60.681 37.037 0.00 0.00 0.00 2.75
3506 4863 7.872113 AACAGAAGACAAAAGTGAAGAGATT 57.128 32.000 0.00 0.00 0.00 2.40
3507 4864 7.872113 ACAGAAGACAAAAGTGAAGAGATTT 57.128 32.000 0.00 0.00 0.00 2.17
3508 4865 7.701445 ACAGAAGACAAAAGTGAAGAGATTTG 58.299 34.615 0.00 0.00 38.42 2.32
3509 4866 7.337942 ACAGAAGACAAAAGTGAAGAGATTTGT 59.662 33.333 2.69 2.69 45.70 2.83
3510 4867 7.642978 CAGAAGACAAAAGTGAAGAGATTTGTG 59.357 37.037 7.39 0.00 43.77 3.33
3511 4868 7.554118 AGAAGACAAAAGTGAAGAGATTTGTGA 59.446 33.333 7.39 0.00 43.77 3.58
3512 4869 7.256756 AGACAAAAGTGAAGAGATTTGTGAG 57.743 36.000 7.39 0.00 43.77 3.51
3513 4870 7.050377 AGACAAAAGTGAAGAGATTTGTGAGA 58.950 34.615 7.39 0.00 43.77 3.27
3514 4871 7.226325 AGACAAAAGTGAAGAGATTTGTGAGAG 59.774 37.037 7.39 0.00 43.77 3.20
3515 4872 6.825721 ACAAAAGTGAAGAGATTTGTGAGAGT 59.174 34.615 2.28 0.00 42.57 3.24
3516 4873 7.011857 ACAAAAGTGAAGAGATTTGTGAGAGTC 59.988 37.037 2.28 0.00 42.57 3.36
3517 4874 6.418057 AAGTGAAGAGATTTGTGAGAGTCT 57.582 37.500 0.00 0.00 0.00 3.24
3518 4875 5.782047 AGTGAAGAGATTTGTGAGAGTCTG 58.218 41.667 0.00 0.00 0.00 3.51
3519 4876 4.928615 GTGAAGAGATTTGTGAGAGTCTGG 59.071 45.833 0.00 0.00 0.00 3.86
3520 4877 4.835056 TGAAGAGATTTGTGAGAGTCTGGA 59.165 41.667 0.00 0.00 0.00 3.86
3521 4878 4.799564 AGAGATTTGTGAGAGTCTGGAC 57.200 45.455 0.00 0.00 0.00 4.02
3522 4879 3.513515 AGAGATTTGTGAGAGTCTGGACC 59.486 47.826 0.00 0.00 0.00 4.46
3523 4880 2.232452 AGATTTGTGAGAGTCTGGACCG 59.768 50.000 0.00 0.00 0.00 4.79
3524 4881 1.699730 TTTGTGAGAGTCTGGACCGA 58.300 50.000 0.00 0.00 0.00 4.69
3525 4882 1.924731 TTGTGAGAGTCTGGACCGAT 58.075 50.000 0.00 0.00 0.00 4.18
3526 4883 1.464734 TGTGAGAGTCTGGACCGATC 58.535 55.000 0.00 0.00 0.00 3.69
3527 4884 0.741915 GTGAGAGTCTGGACCGATCC 59.258 60.000 0.00 0.00 46.48 3.36
3528 4885 0.395862 TGAGAGTCTGGACCGATCCC 60.396 60.000 0.00 0.00 45.59 3.85
3529 4886 0.395862 GAGAGTCTGGACCGATCCCA 60.396 60.000 0.00 0.00 45.59 4.37
3530 4887 0.041238 AGAGTCTGGACCGATCCCAA 59.959 55.000 0.00 0.00 45.59 4.12
3531 4888 0.461961 GAGTCTGGACCGATCCCAAG 59.538 60.000 0.00 0.00 45.59 3.61
3532 4889 0.252284 AGTCTGGACCGATCCCAAGT 60.252 55.000 0.00 0.00 45.59 3.16
3533 4890 0.175989 GTCTGGACCGATCCCAAGTC 59.824 60.000 0.00 0.00 45.59 3.01
3535 4892 2.499685 GGACCGATCCCAAGTCCG 59.500 66.667 0.00 0.00 40.65 4.79
3536 4893 2.356780 GGACCGATCCCAAGTCCGT 61.357 63.158 0.00 0.00 40.65 4.69
3537 4894 1.595357 GACCGATCCCAAGTCCGTT 59.405 57.895 0.00 0.00 0.00 4.44
3538 4895 0.036671 GACCGATCCCAAGTCCGTTT 60.037 55.000 0.00 0.00 0.00 3.60
3539 4896 0.036671 ACCGATCCCAAGTCCGTTTC 60.037 55.000 0.00 0.00 0.00 2.78
3540 4897 0.249398 CCGATCCCAAGTCCGTTTCT 59.751 55.000 0.00 0.00 0.00 2.52
3541 4898 1.359848 CGATCCCAAGTCCGTTTCTG 58.640 55.000 0.00 0.00 0.00 3.02
3542 4899 1.067142 CGATCCCAAGTCCGTTTCTGA 60.067 52.381 0.00 0.00 0.00 3.27
3543 4900 2.347731 GATCCCAAGTCCGTTTCTGAC 58.652 52.381 0.00 0.00 0.00 3.51
3544 4901 1.420430 TCCCAAGTCCGTTTCTGACT 58.580 50.000 0.00 0.00 44.75 3.41
3545 4902 1.070134 TCCCAAGTCCGTTTCTGACTG 59.930 52.381 0.00 0.00 42.10 3.51
3546 4903 0.868406 CCAAGTCCGTTTCTGACTGC 59.132 55.000 0.00 0.00 42.10 4.40
3547 4904 0.868406 CAAGTCCGTTTCTGACTGCC 59.132 55.000 0.00 0.00 42.10 4.85
3548 4905 0.250338 AAGTCCGTTTCTGACTGCCC 60.250 55.000 0.00 0.00 42.10 5.36
3549 4906 1.122019 AGTCCGTTTCTGACTGCCCT 61.122 55.000 0.00 0.00 41.40 5.19
3550 4907 0.951040 GTCCGTTTCTGACTGCCCTG 60.951 60.000 0.00 0.00 0.00 4.45
3551 4908 1.672356 CCGTTTCTGACTGCCCTGG 60.672 63.158 0.00 0.00 0.00 4.45
3552 4909 2.328099 CGTTTCTGACTGCCCTGGC 61.328 63.158 0.00 0.00 42.35 4.85
3553 4910 1.973812 GTTTCTGACTGCCCTGGCC 60.974 63.158 5.57 0.00 41.09 5.36
3554 4911 3.210012 TTTCTGACTGCCCTGGCCC 62.210 63.158 5.57 0.00 41.09 5.80
3555 4912 4.980592 TCTGACTGCCCTGGCCCA 62.981 66.667 5.57 0.58 41.09 5.36
3556 4913 4.729918 CTGACTGCCCTGGCCCAC 62.730 72.222 5.57 0.00 41.09 4.61
3566 4923 3.635510 TGGCCCACCAAAAACCAC 58.364 55.556 0.00 0.00 45.37 4.16
3567 4924 1.002274 TGGCCCACCAAAAACCACT 59.998 52.632 0.00 0.00 45.37 4.00
3568 4925 1.045911 TGGCCCACCAAAAACCACTC 61.046 55.000 0.00 0.00 45.37 3.51
3569 4926 1.745890 GCCCACCAAAAACCACTCC 59.254 57.895 0.00 0.00 0.00 3.85
3570 4927 1.754380 GCCCACCAAAAACCACTCCC 61.754 60.000 0.00 0.00 0.00 4.30
3571 4928 1.118965 CCCACCAAAAACCACTCCCC 61.119 60.000 0.00 0.00 0.00 4.81
3572 4929 0.105709 CCACCAAAAACCACTCCCCT 60.106 55.000 0.00 0.00 0.00 4.79
3573 4930 1.691163 CCACCAAAAACCACTCCCCTT 60.691 52.381 0.00 0.00 0.00 3.95
3574 4931 2.115427 CACCAAAAACCACTCCCCTTT 58.885 47.619 0.00 0.00 0.00 3.11
3575 4932 2.102420 CACCAAAAACCACTCCCCTTTC 59.898 50.000 0.00 0.00 0.00 2.62
3576 4933 1.691976 CCAAAAACCACTCCCCTTTCC 59.308 52.381 0.00 0.00 0.00 3.13
3577 4934 1.339929 CAAAAACCACTCCCCTTTCCG 59.660 52.381 0.00 0.00 0.00 4.30
3578 4935 0.848053 AAAACCACTCCCCTTTCCGA 59.152 50.000 0.00 0.00 0.00 4.55
3579 4936 0.400594 AAACCACTCCCCTTTCCGAG 59.599 55.000 0.00 0.00 0.00 4.63
3580 4937 0.767060 AACCACTCCCCTTTCCGAGT 60.767 55.000 0.00 0.00 39.96 4.18
3581 4938 0.767060 ACCACTCCCCTTTCCGAGTT 60.767 55.000 0.00 0.00 37.23 3.01
3582 4939 1.272807 CCACTCCCCTTTCCGAGTTA 58.727 55.000 0.00 0.00 37.23 2.24
3583 4940 1.838077 CCACTCCCCTTTCCGAGTTAT 59.162 52.381 0.00 0.00 37.23 1.89
3584 4941 2.158943 CCACTCCCCTTTCCGAGTTATC 60.159 54.545 0.00 0.00 37.23 1.75
3594 4951 4.014065 GAGTTATCGACCAGCGCC 57.986 61.111 2.29 0.00 40.61 6.53
3595 4952 1.944676 GAGTTATCGACCAGCGCCG 60.945 63.158 2.29 0.00 40.61 6.46
3596 4953 3.627218 GTTATCGACCAGCGCCGC 61.627 66.667 2.29 0.00 40.61 6.53
3597 4954 3.833645 TTATCGACCAGCGCCGCT 61.834 61.111 5.39 5.39 40.77 5.52
3598 4955 3.365291 TTATCGACCAGCGCCGCTT 62.365 57.895 9.89 0.00 36.40 4.68
3599 4956 3.768185 TATCGACCAGCGCCGCTTC 62.768 63.158 9.89 4.46 36.40 3.86
3602 4959 4.742201 GACCAGCGCCGCTTCAGA 62.742 66.667 9.89 0.00 36.40 3.27
3603 4960 4.749310 ACCAGCGCCGCTTCAGAG 62.749 66.667 9.89 0.00 36.40 3.35
3608 4965 4.069232 CGCCGCTTCAGAGGGTCA 62.069 66.667 0.00 0.00 35.40 4.02
3609 4966 2.125350 GCCGCTTCAGAGGGTCAG 60.125 66.667 0.00 0.00 35.40 3.51
3610 4967 2.125350 CCGCTTCAGAGGGTCAGC 60.125 66.667 0.00 0.00 34.22 4.26
3611 4968 2.654079 CCGCTTCAGAGGGTCAGCT 61.654 63.158 0.00 0.00 34.22 4.24
3612 4969 1.294780 CGCTTCAGAGGGTCAGCTT 59.705 57.895 0.00 0.00 0.00 3.74
3613 4970 0.739112 CGCTTCAGAGGGTCAGCTTC 60.739 60.000 0.00 0.00 0.00 3.86
3614 4971 0.392327 GCTTCAGAGGGTCAGCTTCC 60.392 60.000 0.00 0.00 0.00 3.46
3615 4972 0.108424 CTTCAGAGGGTCAGCTTCCG 60.108 60.000 0.00 0.00 0.00 4.30
3616 4973 2.125350 CAGAGGGTCAGCTTCCGC 60.125 66.667 0.00 0.00 0.00 5.54
3617 4974 2.604686 AGAGGGTCAGCTTCCGCA 60.605 61.111 4.55 0.00 39.10 5.69
3618 4975 1.992277 AGAGGGTCAGCTTCCGCAT 60.992 57.895 4.55 0.00 39.10 4.73
3619 4976 1.078143 GAGGGTCAGCTTCCGCATT 60.078 57.895 0.00 0.00 39.10 3.56
3620 4977 1.078143 AGGGTCAGCTTCCGCATTC 60.078 57.895 0.00 0.00 39.10 2.67
3621 4978 1.377202 GGGTCAGCTTCCGCATTCA 60.377 57.895 0.00 0.00 39.10 2.57
3622 4979 0.749454 GGGTCAGCTTCCGCATTCAT 60.749 55.000 0.00 0.00 39.10 2.57
3623 4980 0.379669 GGTCAGCTTCCGCATTCATG 59.620 55.000 0.00 0.00 39.10 3.07
3633 4990 3.908081 CATTCATGCCCCGCCAGC 61.908 66.667 0.00 0.00 0.00 4.85
3646 5003 2.807045 CCAGCGCTCACTCACGTC 60.807 66.667 7.13 0.00 0.00 4.34
3647 5004 3.168604 CAGCGCTCACTCACGTCG 61.169 66.667 7.13 0.00 0.00 5.12
3648 5005 4.406173 AGCGCTCACTCACGTCGG 62.406 66.667 2.64 0.00 0.00 4.79
3650 5007 4.700365 CGCTCACTCACGTCGGCA 62.700 66.667 0.00 0.00 0.00 5.69
3651 5008 2.125912 GCTCACTCACGTCGGCAT 60.126 61.111 0.00 0.00 0.00 4.40
3652 5009 1.738099 GCTCACTCACGTCGGCATT 60.738 57.895 0.00 0.00 0.00 3.56
3653 5010 1.959899 GCTCACTCACGTCGGCATTG 61.960 60.000 0.00 0.00 0.00 2.82
3654 5011 1.354337 CTCACTCACGTCGGCATTGG 61.354 60.000 0.00 0.00 0.00 3.16
3655 5012 2.742372 ACTCACGTCGGCATTGGC 60.742 61.111 0.00 0.00 40.13 4.52
3656 5013 2.434884 CTCACGTCGGCATTGGCT 60.435 61.111 8.71 0.00 40.87 4.75
3693 5050 2.031012 TGCTTCCCAGTGCAGACG 59.969 61.111 0.00 0.00 34.84 4.18
3694 5051 2.343758 GCTTCCCAGTGCAGACGA 59.656 61.111 0.00 0.00 0.00 4.20
3695 5052 2.029844 GCTTCCCAGTGCAGACGAC 61.030 63.158 0.00 0.00 0.00 4.34
3696 5053 1.367471 CTTCCCAGTGCAGACGACA 59.633 57.895 0.00 0.00 0.00 4.35
3697 5054 0.668706 CTTCCCAGTGCAGACGACAG 60.669 60.000 0.00 0.00 0.00 3.51
3698 5055 2.715532 TTCCCAGTGCAGACGACAGC 62.716 60.000 0.00 0.00 0.00 4.40
3699 5056 2.740055 CCAGTGCAGACGACAGCC 60.740 66.667 0.00 0.00 0.00 4.85
3700 5057 2.029518 CAGTGCAGACGACAGCCA 59.970 61.111 0.00 0.00 0.00 4.75
3701 5058 2.029666 AGTGCAGACGACAGCCAC 59.970 61.111 0.00 0.00 0.00 5.01
3702 5059 3.406361 GTGCAGACGACAGCCACG 61.406 66.667 0.00 0.00 0.00 4.94
3706 5063 4.280494 AGACGACAGCCACGCGTT 62.280 61.111 10.22 0.00 38.51 4.84
3707 5064 3.764049 GACGACAGCCACGCGTTC 61.764 66.667 10.22 2.75 38.51 3.95
3708 5065 4.578898 ACGACAGCCACGCGTTCA 62.579 61.111 10.22 0.00 34.12 3.18
3709 5066 3.334751 CGACAGCCACGCGTTCAA 61.335 61.111 10.22 0.00 0.00 2.69
3710 5067 2.876879 CGACAGCCACGCGTTCAAA 61.877 57.895 10.22 0.00 0.00 2.69
3711 5068 1.368850 GACAGCCACGCGTTCAAAC 60.369 57.895 10.22 0.00 0.00 2.93
3722 5079 2.849521 GTTCAAACGACACGCCAAC 58.150 52.632 0.00 0.00 0.00 3.77
3723 5080 0.590481 GTTCAAACGACACGCCAACC 60.590 55.000 0.00 0.00 0.00 3.77
3724 5081 1.025113 TTCAAACGACACGCCAACCA 61.025 50.000 0.00 0.00 0.00 3.67
3725 5082 1.298041 CAAACGACACGCCAACCAC 60.298 57.895 0.00 0.00 0.00 4.16
3726 5083 2.474612 AAACGACACGCCAACCACC 61.475 57.895 0.00 0.00 0.00 4.61
3727 5084 2.879813 AAACGACACGCCAACCACCT 62.880 55.000 0.00 0.00 0.00 4.00
3728 5085 3.345808 CGACACGCCAACCACCTG 61.346 66.667 0.00 0.00 0.00 4.00
3729 5086 2.203153 GACACGCCAACCACCTGT 60.203 61.111 0.00 0.00 0.00 4.00
3730 5087 1.822186 GACACGCCAACCACCTGTT 60.822 57.895 0.00 0.00 37.80 3.16
3731 5088 1.782028 GACACGCCAACCACCTGTTC 61.782 60.000 0.00 0.00 34.00 3.18
3732 5089 2.590575 ACGCCAACCACCTGTTCG 60.591 61.111 0.00 0.00 34.00 3.95
3733 5090 2.590575 CGCCAACCACCTGTTCGT 60.591 61.111 0.00 0.00 34.00 3.85
3734 5091 2.604174 CGCCAACCACCTGTTCGTC 61.604 63.158 0.00 0.00 34.00 4.20
3735 5092 1.227853 GCCAACCACCTGTTCGTCT 60.228 57.895 0.00 0.00 34.00 4.18
3736 5093 1.507141 GCCAACCACCTGTTCGTCTG 61.507 60.000 0.00 0.00 34.00 3.51
3737 5094 0.179056 CCAACCACCTGTTCGTCTGT 60.179 55.000 0.00 0.00 34.00 3.41
3738 5095 1.217882 CAACCACCTGTTCGTCTGTC 58.782 55.000 0.00 0.00 34.00 3.51
3739 5096 1.120530 AACCACCTGTTCGTCTGTCT 58.879 50.000 0.00 0.00 28.45 3.41
3740 5097 0.389391 ACCACCTGTTCGTCTGTCTG 59.611 55.000 0.00 0.00 0.00 3.51
3741 5098 0.946221 CCACCTGTTCGTCTGTCTGC 60.946 60.000 0.00 0.00 0.00 4.26
3742 5099 0.946221 CACCTGTTCGTCTGTCTGCC 60.946 60.000 0.00 0.00 0.00 4.85
3743 5100 1.115930 ACCTGTTCGTCTGTCTGCCT 61.116 55.000 0.00 0.00 0.00 4.75
3744 5101 0.389166 CCTGTTCGTCTGTCTGCCTC 60.389 60.000 0.00 0.00 0.00 4.70
3745 5102 0.389166 CTGTTCGTCTGTCTGCCTCC 60.389 60.000 0.00 0.00 0.00 4.30
3746 5103 1.079750 GTTCGTCTGTCTGCCTCCC 60.080 63.158 0.00 0.00 0.00 4.30
3747 5104 2.636412 TTCGTCTGTCTGCCTCCCG 61.636 63.158 0.00 0.00 0.00 5.14
3748 5105 4.803426 CGTCTGTCTGCCTCCCGC 62.803 72.222 0.00 0.00 38.31 6.13
3756 5113 2.124193 TGCCTCCCGCATTGATGG 60.124 61.111 0.00 0.00 44.64 3.51
3757 5114 3.599704 GCCTCCCGCATTGATGGC 61.600 66.667 0.00 0.00 37.47 4.40
3758 5115 2.124193 CCTCCCGCATTGATGGCA 60.124 61.111 0.00 0.00 0.00 4.92
3759 5116 1.529948 CCTCCCGCATTGATGGCAT 60.530 57.895 0.00 0.00 0.00 4.40
3760 5117 1.658114 CTCCCGCATTGATGGCATG 59.342 57.895 3.81 0.00 0.00 4.06
3761 5118 2.028484 CCCGCATTGATGGCATGC 59.972 61.111 9.90 9.90 37.91 4.06
3764 5121 2.809706 GCATTGATGGCATGCGGT 59.190 55.556 12.44 1.79 0.00 5.68
3765 5122 1.142314 GCATTGATGGCATGCGGTT 59.858 52.632 12.44 0.00 0.00 4.44
3766 5123 0.385029 GCATTGATGGCATGCGGTTA 59.615 50.000 12.44 0.00 0.00 2.85
3767 5124 1.865248 GCATTGATGGCATGCGGTTAC 60.865 52.381 12.44 0.00 0.00 2.50
3768 5125 1.032014 ATTGATGGCATGCGGTTACC 58.968 50.000 12.44 0.00 0.00 2.85
3779 5136 2.493501 GGTTACCGAGGCGTCTCC 59.506 66.667 12.25 0.00 36.70 3.71
3802 5159 4.096003 CGCCACCCGTTCATCCCT 62.096 66.667 0.00 0.00 0.00 4.20
3803 5160 2.124695 GCCACCCGTTCATCCCTC 60.125 66.667 0.00 0.00 0.00 4.30
3804 5161 2.670148 GCCACCCGTTCATCCCTCT 61.670 63.158 0.00 0.00 0.00 3.69
3805 5162 1.221840 CCACCCGTTCATCCCTCTG 59.778 63.158 0.00 0.00 0.00 3.35
3806 5163 1.450312 CACCCGTTCATCCCTCTGC 60.450 63.158 0.00 0.00 0.00 4.26
3807 5164 2.190578 CCCGTTCATCCCTCTGCC 59.809 66.667 0.00 0.00 0.00 4.85
3808 5165 2.202932 CCGTTCATCCCTCTGCCG 60.203 66.667 0.00 0.00 0.00 5.69
3809 5166 2.892425 CGTTCATCCCTCTGCCGC 60.892 66.667 0.00 0.00 0.00 6.53
3810 5167 2.514824 GTTCATCCCTCTGCCGCC 60.515 66.667 0.00 0.00 0.00 6.13
3811 5168 3.797353 TTCATCCCTCTGCCGCCC 61.797 66.667 0.00 0.00 0.00 6.13
3813 5170 3.882326 CATCCCTCTGCCGCCCAT 61.882 66.667 0.00 0.00 0.00 4.00
3814 5171 3.564218 ATCCCTCTGCCGCCCATC 61.564 66.667 0.00 0.00 0.00 3.51
3829 5186 2.277084 CCCATCGGCGCTATATAAACC 58.723 52.381 7.64 0.00 0.00 3.27
3830 5187 1.924524 CCATCGGCGCTATATAAACCG 59.075 52.381 7.64 10.15 45.15 4.44
3831 5188 1.323534 CATCGGCGCTATATAAACCGC 59.676 52.381 7.64 11.33 43.50 5.68
3832 5189 0.599558 TCGGCGCTATATAAACCGCT 59.400 50.000 7.64 0.00 45.21 5.52
3833 5190 0.713883 CGGCGCTATATAAACCGCTG 59.286 55.000 7.64 14.93 45.21 5.18
3834 5191 0.442699 GGCGCTATATAAACCGCTGC 59.557 55.000 7.64 9.47 45.21 5.25
3835 5192 0.442699 GCGCTATATAAACCGCTGCC 59.557 55.000 0.00 0.00 42.83 4.85
3836 5193 1.076332 CGCTATATAAACCGCTGCCC 58.924 55.000 0.00 0.00 0.00 5.36
3837 5194 1.450025 GCTATATAAACCGCTGCCCC 58.550 55.000 0.00 0.00 0.00 5.80
3838 5195 1.271163 GCTATATAAACCGCTGCCCCA 60.271 52.381 0.00 0.00 0.00 4.96
3839 5196 2.812613 GCTATATAAACCGCTGCCCCAA 60.813 50.000 0.00 0.00 0.00 4.12
3840 5197 2.675658 ATATAAACCGCTGCCCCAAT 57.324 45.000 0.00 0.00 0.00 3.16
3841 5198 1.686355 TATAAACCGCTGCCCCAATG 58.314 50.000 0.00 0.00 0.00 2.82
3842 5199 1.675720 ATAAACCGCTGCCCCAATGC 61.676 55.000 0.00 0.00 0.00 3.56
3847 5204 4.764771 GCTGCCCCAATGCCCTGA 62.765 66.667 0.00 0.00 0.00 3.86
3848 5205 2.281091 CTGCCCCAATGCCCTGAT 59.719 61.111 0.00 0.00 0.00 2.90
3849 5206 2.042741 TGCCCCAATGCCCTGATG 60.043 61.111 0.00 0.00 0.00 3.07
3850 5207 3.543641 GCCCCAATGCCCTGATGC 61.544 66.667 0.00 0.00 0.00 3.91
3851 5208 2.281091 CCCCAATGCCCTGATGCT 59.719 61.111 0.00 0.00 0.00 3.79
3852 5209 1.538167 CCCCAATGCCCTGATGCTA 59.462 57.895 0.00 0.00 0.00 3.49
3853 5210 0.113776 CCCCAATGCCCTGATGCTAT 59.886 55.000 0.00 0.00 0.00 2.97
3854 5211 1.355381 CCCCAATGCCCTGATGCTATA 59.645 52.381 0.00 0.00 0.00 1.31
3855 5212 2.440409 CCCAATGCCCTGATGCTATAC 58.560 52.381 0.00 0.00 0.00 1.47
3856 5213 2.040813 CCCAATGCCCTGATGCTATACT 59.959 50.000 0.00 0.00 0.00 2.12
3857 5214 3.264193 CCCAATGCCCTGATGCTATACTA 59.736 47.826 0.00 0.00 0.00 1.82
3858 5215 4.080129 CCCAATGCCCTGATGCTATACTAT 60.080 45.833 0.00 0.00 0.00 2.12
3859 5216 5.130975 CCCAATGCCCTGATGCTATACTATA 59.869 44.000 0.00 0.00 0.00 1.31
3860 5217 6.183361 CCCAATGCCCTGATGCTATACTATAT 60.183 42.308 0.00 0.00 0.00 0.86
3861 5218 7.016563 CCCAATGCCCTGATGCTATACTATATA 59.983 40.741 0.00 0.00 0.00 0.86
3862 5219 8.432013 CCAATGCCCTGATGCTATACTATATAA 58.568 37.037 0.00 0.00 0.00 0.98
3863 5220 9.836864 CAATGCCCTGATGCTATACTATATAAA 57.163 33.333 0.00 0.00 0.00 1.40
3864 5221 9.838339 AATGCCCTGATGCTATACTATATAAAC 57.162 33.333 0.00 0.00 0.00 2.01
3865 5222 7.792032 TGCCCTGATGCTATACTATATAAACC 58.208 38.462 0.00 0.00 0.00 3.27
3866 5223 6.924060 GCCCTGATGCTATACTATATAAACCG 59.076 42.308 0.00 0.00 0.00 4.44
3867 5224 7.434492 CCCTGATGCTATACTATATAAACCGG 58.566 42.308 0.00 0.00 0.00 5.28
3868 5225 7.069578 CCCTGATGCTATACTATATAAACCGGT 59.930 40.741 0.00 0.00 0.00 5.28
3869 5226 7.921214 CCTGATGCTATACTATATAAACCGGTG 59.079 40.741 8.52 0.00 0.00 4.94
3870 5227 7.262772 TGATGCTATACTATATAAACCGGTGC 58.737 38.462 8.52 2.19 0.00 5.01
3871 5228 6.845758 TGCTATACTATATAAACCGGTGCT 57.154 37.500 8.52 0.01 0.00 4.40
3872 5229 7.235935 TGCTATACTATATAAACCGGTGCTT 57.764 36.000 8.52 1.21 0.00 3.91
3873 5230 7.318141 TGCTATACTATATAAACCGGTGCTTC 58.682 38.462 8.52 0.00 0.00 3.86
3874 5231 6.471519 GCTATACTATATAAACCGGTGCTTCG 59.528 42.308 8.52 0.00 0.00 3.79
3881 5238 4.420143 CCGGTGCTTCGGTCATAG 57.580 61.111 9.58 0.00 44.60 2.23
3882 5239 1.883084 CCGGTGCTTCGGTCATAGC 60.883 63.158 9.58 0.00 44.60 2.97
3883 5240 1.883084 CGGTGCTTCGGTCATAGCC 60.883 63.158 0.00 0.00 36.56 3.93
3884 5241 1.220749 GGTGCTTCGGTCATAGCCA 59.779 57.895 0.00 0.00 36.56 4.75
3885 5242 0.811616 GGTGCTTCGGTCATAGCCAG 60.812 60.000 0.00 0.00 36.56 4.85
3886 5243 0.108138 GTGCTTCGGTCATAGCCAGT 60.108 55.000 0.00 0.00 36.56 4.00
3887 5244 0.175760 TGCTTCGGTCATAGCCAGTC 59.824 55.000 0.00 0.00 36.56 3.51
3888 5245 0.175760 GCTTCGGTCATAGCCAGTCA 59.824 55.000 0.00 0.00 0.00 3.41
3889 5246 1.202580 GCTTCGGTCATAGCCAGTCAT 60.203 52.381 0.00 0.00 0.00 3.06
3890 5247 2.748605 CTTCGGTCATAGCCAGTCATC 58.251 52.381 0.00 0.00 0.00 2.92
3891 5248 1.040646 TCGGTCATAGCCAGTCATCC 58.959 55.000 0.00 0.00 0.00 3.51
3892 5249 0.034059 CGGTCATAGCCAGTCATCCC 59.966 60.000 0.00 0.00 0.00 3.85
3893 5250 1.428869 GGTCATAGCCAGTCATCCCT 58.571 55.000 0.00 0.00 0.00 4.20
3894 5251 1.346068 GGTCATAGCCAGTCATCCCTC 59.654 57.143 0.00 0.00 0.00 4.30
3895 5252 2.324541 GTCATAGCCAGTCATCCCTCT 58.675 52.381 0.00 0.00 0.00 3.69
3896 5253 2.298729 GTCATAGCCAGTCATCCCTCTC 59.701 54.545 0.00 0.00 0.00 3.20
3897 5254 1.622811 CATAGCCAGTCATCCCTCTCC 59.377 57.143 0.00 0.00 0.00 3.71
3898 5255 0.636647 TAGCCAGTCATCCCTCTCCA 59.363 55.000 0.00 0.00 0.00 3.86
3899 5256 0.980231 AGCCAGTCATCCCTCTCCAC 60.980 60.000 0.00 0.00 0.00 4.02
3900 5257 1.267574 GCCAGTCATCCCTCTCCACA 61.268 60.000 0.00 0.00 0.00 4.17
3901 5258 0.539051 CCAGTCATCCCTCTCCACAC 59.461 60.000 0.00 0.00 0.00 3.82
3902 5259 0.539051 CAGTCATCCCTCTCCACACC 59.461 60.000 0.00 0.00 0.00 4.16
3903 5260 0.117140 AGTCATCCCTCTCCACACCA 59.883 55.000 0.00 0.00 0.00 4.17
3904 5261 1.207791 GTCATCCCTCTCCACACCAT 58.792 55.000 0.00 0.00 0.00 3.55
3905 5262 1.561542 GTCATCCCTCTCCACACCATT 59.438 52.381 0.00 0.00 0.00 3.16
3906 5263 1.839994 TCATCCCTCTCCACACCATTC 59.160 52.381 0.00 0.00 0.00 2.67
3907 5264 1.561076 CATCCCTCTCCACACCATTCA 59.439 52.381 0.00 0.00 0.00 2.57
3908 5265 0.984230 TCCCTCTCCACACCATTCAC 59.016 55.000 0.00 0.00 0.00 3.18
3909 5266 0.987294 CCCTCTCCACACCATTCACT 59.013 55.000 0.00 0.00 0.00 3.41
3910 5267 1.339438 CCCTCTCCACACCATTCACTG 60.339 57.143 0.00 0.00 0.00 3.66
3911 5268 1.446907 CTCTCCACACCATTCACTGC 58.553 55.000 0.00 0.00 0.00 4.40
3912 5269 0.036732 TCTCCACACCATTCACTGCC 59.963 55.000 0.00 0.00 0.00 4.85
3913 5270 0.250858 CTCCACACCATTCACTGCCA 60.251 55.000 0.00 0.00 0.00 4.92
3914 5271 0.405198 TCCACACCATTCACTGCCAT 59.595 50.000 0.00 0.00 0.00 4.40
3915 5272 0.528924 CCACACCATTCACTGCCATG 59.471 55.000 0.00 0.00 0.00 3.66
3916 5273 0.528924 CACACCATTCACTGCCATGG 59.471 55.000 7.63 7.63 45.01 3.66
3917 5274 0.405198 ACACCATTCACTGCCATGGA 59.595 50.000 18.40 0.00 42.49 3.41
3918 5275 1.006281 ACACCATTCACTGCCATGGAT 59.994 47.619 18.40 0.00 42.49 3.41
3919 5276 1.679680 CACCATTCACTGCCATGGATC 59.320 52.381 18.40 0.00 42.49 3.36
3920 5277 1.325355 CCATTCACTGCCATGGATCC 58.675 55.000 18.40 4.20 42.49 3.36
3921 5278 1.325355 CATTCACTGCCATGGATCCC 58.675 55.000 18.40 0.00 0.00 3.85
3922 5279 1.133575 CATTCACTGCCATGGATCCCT 60.134 52.381 18.40 0.00 0.00 4.20
3923 5280 0.548031 TTCACTGCCATGGATCCCTC 59.452 55.000 18.40 0.00 0.00 4.30
3924 5281 1.150081 CACTGCCATGGATCCCTCC 59.850 63.158 18.40 0.00 42.45 4.30
3925 5282 2.429058 CTGCCATGGATCCCTCCG 59.571 66.667 18.40 0.00 45.37 4.63
3926 5283 3.839353 CTGCCATGGATCCCTCCGC 62.839 68.421 18.40 6.28 45.37 5.54
3927 5284 4.650377 GCCATGGATCCCTCCGCC 62.650 72.222 18.40 0.00 45.37 6.13
3928 5285 4.320456 CCATGGATCCCTCCGCCG 62.320 72.222 5.56 0.00 45.37 6.46
3929 5286 3.550431 CATGGATCCCTCCGCCGT 61.550 66.667 9.90 0.00 45.37 5.68
3930 5287 3.234730 ATGGATCCCTCCGCCGTC 61.235 66.667 9.90 0.00 45.37 4.79
3931 5288 4.770362 TGGATCCCTCCGCCGTCA 62.770 66.667 9.90 0.00 45.37 4.35
3932 5289 3.467226 GGATCCCTCCGCCGTCAA 61.467 66.667 0.00 0.00 0.00 3.18
3933 5290 2.582436 GATCCCTCCGCCGTCAAA 59.418 61.111 0.00 0.00 0.00 2.69
3934 5291 1.521681 GATCCCTCCGCCGTCAAAG 60.522 63.158 0.00 0.00 0.00 2.77
3935 5292 3.682292 ATCCCTCCGCCGTCAAAGC 62.682 63.158 0.00 0.00 0.00 3.51
3936 5293 4.394712 CCCTCCGCCGTCAAAGCT 62.395 66.667 0.00 0.00 0.00 3.74
3937 5294 2.815647 CCTCCGCCGTCAAAGCTC 60.816 66.667 0.00 0.00 0.00 4.09
3938 5295 2.262915 CTCCGCCGTCAAAGCTCT 59.737 61.111 0.00 0.00 0.00 4.09
3939 5296 1.807573 CTCCGCCGTCAAAGCTCTC 60.808 63.158 0.00 0.00 0.00 3.20
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 6.947644 TTCTTCTTTAAGGGTAACACCAAC 57.052 37.500 0.00 0.00 41.02 3.77
598 779 9.197306 TGTGAGAGGTTTCACTTTAGCTATATA 57.803 33.333 0.00 0.00 46.00 0.86
599 780 8.079211 TGTGAGAGGTTTCACTTTAGCTATAT 57.921 34.615 0.00 0.00 46.00 0.86
600 781 7.476540 TGTGAGAGGTTTCACTTTAGCTATA 57.523 36.000 0.00 0.00 46.00 1.31
601 782 6.360370 TGTGAGAGGTTTCACTTTAGCTAT 57.640 37.500 0.00 0.00 46.00 2.97
602 783 5.801531 TGTGAGAGGTTTCACTTTAGCTA 57.198 39.130 7.56 0.00 46.00 3.32
603 784 4.689612 TGTGAGAGGTTTCACTTTAGCT 57.310 40.909 7.56 0.00 46.00 3.32
604 785 4.023963 GGTTGTGAGAGGTTTCACTTTAGC 60.024 45.833 7.56 0.68 46.00 3.09
605 786 4.515567 GGGTTGTGAGAGGTTTCACTTTAG 59.484 45.833 7.56 0.00 46.00 1.85
606 787 4.080243 TGGGTTGTGAGAGGTTTCACTTTA 60.080 41.667 7.56 0.00 46.00 1.85
607 788 3.288092 GGGTTGTGAGAGGTTTCACTTT 58.712 45.455 7.56 0.00 46.00 2.66
608 789 2.241176 TGGGTTGTGAGAGGTTTCACTT 59.759 45.455 7.56 0.00 46.00 3.16
609 790 1.843851 TGGGTTGTGAGAGGTTTCACT 59.156 47.619 7.56 0.00 46.00 3.41
610 791 1.947456 GTGGGTTGTGAGAGGTTTCAC 59.053 52.381 0.00 0.00 46.02 3.18
611 792 1.562008 TGTGGGTTGTGAGAGGTTTCA 59.438 47.619 0.00 0.00 0.00 2.69
612 793 1.947456 GTGTGGGTTGTGAGAGGTTTC 59.053 52.381 0.00 0.00 0.00 2.78
627 808 1.416049 CGATCGAACGCTTGTGTGG 59.584 57.895 10.26 0.00 0.00 4.17
629 810 1.006571 ACCGATCGAACGCTTGTGT 60.007 52.632 18.66 0.00 0.00 3.72
635 816 1.743855 GCTGAAGACCGATCGAACGC 61.744 60.000 18.66 5.29 0.00 4.84
666 847 2.188837 TCGAGTATAAGTGCGTGCAG 57.811 50.000 0.00 0.00 0.00 4.41
668 849 3.001395 AGATCGAGTATAAGTGCGTGC 57.999 47.619 0.00 0.00 0.00 5.34
697 878 1.347817 GACTCTTCTTGCCTCGTGCG 61.348 60.000 0.00 0.00 45.60 5.34
721 902 1.230635 AAGTGTGCTAGTGCTTGGCG 61.231 55.000 0.00 0.00 40.48 5.69
845 1027 2.444140 CGGGTGGAGGGGGAGTAG 60.444 72.222 0.00 0.00 0.00 2.57
970 1161 2.683968 TGCACGATTTCTTTAGCGTCT 58.316 42.857 0.00 0.00 34.37 4.18
972 1163 2.412847 GCTTGCACGATTTCTTTAGCGT 60.413 45.455 0.00 0.00 37.48 5.07
1086 1277 1.433879 CTCCCACCTCTCGCGTAAG 59.566 63.158 5.77 4.64 43.44 2.34
1098 1289 4.825679 CCCTCCCCCTCCTCCCAC 62.826 77.778 0.00 0.00 0.00 4.61
1449 1649 3.198872 GTGGGTTGATTTTCGCCAAAAA 58.801 40.909 0.00 0.00 40.98 1.94
1902 2135 5.520288 GTGAAATGCTGAGACGAATTAGCTA 59.480 40.000 9.10 0.00 37.10 3.32
1903 2136 4.331168 GTGAAATGCTGAGACGAATTAGCT 59.669 41.667 9.10 0.00 37.10 3.32
1904 2137 4.093408 TGTGAAATGCTGAGACGAATTAGC 59.907 41.667 0.00 0.00 36.72 3.09
1918 2152 8.375465 GTGAATTTGCTACTTAATGTGAAATGC 58.625 33.333 0.00 0.00 0.00 3.56
1969 2215 6.820656 GTGGTCTGAATACAAGACATGAGAAT 59.179 38.462 0.00 0.00 34.52 2.40
1984 2230 3.380479 TTCGTCGAAAGTGGTCTGAAT 57.620 42.857 4.91 0.00 0.00 2.57
1997 2243 5.579511 GGTAAGATTCTTTCCAATTCGTCGA 59.420 40.000 15.10 0.00 0.00 4.20
2009 2255 4.981812 AGGTTTCACGGGTAAGATTCTTT 58.018 39.130 3.86 0.00 0.00 2.52
2026 2272 1.074951 CGAAAGGGCCCAGAGGTTT 59.925 57.895 27.56 15.70 34.57 3.27
2027 2273 2.154074 ACGAAAGGGCCCAGAGGTT 61.154 57.895 27.56 5.84 34.57 3.50
2029 2275 2.045926 CACGAAAGGGCCCAGAGG 60.046 66.667 27.56 13.16 0.00 3.69
2031 2277 2.747686 GACACGAAAGGGCCCAGA 59.252 61.111 27.56 0.00 38.93 3.86
2032 2278 1.550130 TAGGACACGAAAGGGCCCAG 61.550 60.000 27.56 14.81 38.93 4.45
2033 2279 1.536907 TAGGACACGAAAGGGCCCA 60.537 57.895 27.56 0.00 38.93 5.36
2090 2351 0.396435 TTCTCCCACATCACGCTTGT 59.604 50.000 0.00 0.00 0.00 3.16
2092 2353 2.270352 TTTTCTCCCACATCACGCTT 57.730 45.000 0.00 0.00 0.00 4.68
2152 2413 3.235292 TACCGCGTTCGTCGTCGTT 62.235 57.895 4.92 6.76 42.13 3.85
2165 2426 4.849310 TGGATTGCCCGCTACCGC 62.849 66.667 0.00 0.00 37.93 5.68
2350 2623 1.221840 CGGAGTGGTCCAAGGGATG 59.778 63.158 0.00 0.00 44.18 3.51
2352 2625 1.911766 GTCGGAGTGGTCCAAGGGA 60.912 63.158 0.00 0.00 44.18 4.20
2427 2700 4.160439 TCTGAAATCTCTACCACGCTGATT 59.840 41.667 0.00 0.00 0.00 2.57
2440 2713 1.363744 CCGCAGTGGTCTGAAATCTC 58.636 55.000 0.00 0.00 43.76 2.75
2690 2964 1.300388 CCCGAAGAACACGAACGGT 60.300 57.895 0.00 0.00 41.67 4.83
2827 3107 3.083997 GGGCCTCCATCACGTCCT 61.084 66.667 0.84 0.00 0.00 3.85
2831 3111 1.153289 CTTCTGGGCCTCCATCACG 60.153 63.158 4.53 0.00 43.11 4.35
2835 3115 2.311854 CCACCTTCTGGGCCTCCAT 61.312 63.158 4.53 0.00 43.11 3.41
2848 3128 4.148825 GCTCGATCACCGCCACCT 62.149 66.667 0.00 0.00 38.37 4.00
2892 3172 1.199425 AACGGTTCCCTCTCCTTCCC 61.199 60.000 0.00 0.00 0.00 3.97
2981 3263 5.777802 ACACAGGTAAGATCGATCATCATC 58.222 41.667 26.47 11.44 33.29 2.92
2982 3264 5.798125 ACACAGGTAAGATCGATCATCAT 57.202 39.130 26.47 11.25 33.29 2.45
2983 3265 5.360999 AGAACACAGGTAAGATCGATCATCA 59.639 40.000 26.47 8.69 33.29 3.07
3070 3352 1.134936 ACACAACACACACTAGCGACA 60.135 47.619 0.00 0.00 0.00 4.35
3071 3353 1.567504 ACACAACACACACTAGCGAC 58.432 50.000 0.00 0.00 0.00 5.19
3072 3354 2.159156 AGAACACAACACACACTAGCGA 60.159 45.455 0.00 0.00 0.00 4.93
3073 3355 2.201732 AGAACACAACACACACTAGCG 58.798 47.619 0.00 0.00 0.00 4.26
3074 3356 4.369182 ACTAGAACACAACACACACTAGC 58.631 43.478 0.00 0.00 32.06 3.42
3075 3357 5.919141 GGTACTAGAACACAACACACACTAG 59.081 44.000 0.00 0.00 34.14 2.57
3077 3359 4.404715 AGGTACTAGAACACAACACACACT 59.595 41.667 0.00 0.00 36.02 3.55
3099 3381 4.790766 GCCAGAACTCACATGAACAAACAG 60.791 45.833 0.00 0.00 0.00 3.16
3191 4548 6.441924 TGGATAAGAGAGACTCACTGGATTTT 59.558 38.462 5.02 0.00 32.06 1.82
3251 4608 5.351458 CAGTACTGATGAATGATTCGGTGA 58.649 41.667 18.45 0.00 33.60 4.02
3308 4665 5.936956 GGATAGAGATGCCCTTACTTTCATG 59.063 44.000 0.00 0.00 0.00 3.07
3320 4677 1.768684 TTGGGGCGGATAGAGATGCC 61.769 60.000 0.00 0.00 46.82 4.40
3343 4700 2.165301 GGATGTCTTCCGCCGTTCG 61.165 63.158 0.00 0.00 33.93 3.95
3344 4701 3.795638 GGATGTCTTCCGCCGTTC 58.204 61.111 0.00 0.00 33.93 3.95
3351 4708 1.401905 GAACCGCATTGGATGTCTTCC 59.598 52.381 0.00 0.00 45.69 3.46
3352 4709 2.096496 CAGAACCGCATTGGATGTCTTC 59.904 50.000 0.00 0.00 42.00 2.87
3353 4710 2.086869 CAGAACCGCATTGGATGTCTT 58.913 47.619 0.00 0.00 42.00 3.01
3354 4711 1.003580 ACAGAACCGCATTGGATGTCT 59.996 47.619 0.00 0.00 42.00 3.41
3355 4712 1.453155 ACAGAACCGCATTGGATGTC 58.547 50.000 0.00 0.00 42.00 3.06
3356 4713 2.779755 TACAGAACCGCATTGGATGT 57.220 45.000 0.00 0.00 42.00 3.06
3357 4714 2.221749 CGATACAGAACCGCATTGGATG 59.778 50.000 0.00 0.00 42.00 3.51
3358 4715 2.483876 CGATACAGAACCGCATTGGAT 58.516 47.619 0.00 0.00 42.00 3.41
3359 4716 1.934589 CGATACAGAACCGCATTGGA 58.065 50.000 0.00 0.00 42.00 3.53
3366 4723 1.320555 CGTTGAAGCGATACAGAACCG 59.679 52.381 0.00 0.00 0.00 4.44
3367 4724 1.060698 GCGTTGAAGCGATACAGAACC 59.939 52.381 0.00 0.00 0.00 3.62
3368 4725 1.724623 TGCGTTGAAGCGATACAGAAC 59.275 47.619 0.00 0.00 40.67 3.01
3369 4726 1.992667 CTGCGTTGAAGCGATACAGAA 59.007 47.619 0.00 0.00 40.67 3.02
3370 4727 1.067846 ACTGCGTTGAAGCGATACAGA 60.068 47.619 0.00 0.00 40.67 3.41
3371 4728 1.350193 ACTGCGTTGAAGCGATACAG 58.650 50.000 0.00 0.00 40.67 2.74
3372 4729 1.724623 GAACTGCGTTGAAGCGATACA 59.275 47.619 0.00 0.00 40.67 2.29
3373 4730 1.993370 AGAACTGCGTTGAAGCGATAC 59.007 47.619 0.00 0.00 40.67 2.24
3374 4731 1.992667 CAGAACTGCGTTGAAGCGATA 59.007 47.619 0.00 0.00 40.67 2.92
3375 4732 0.792640 CAGAACTGCGTTGAAGCGAT 59.207 50.000 0.00 0.00 40.67 4.58
3376 4733 1.221466 CCAGAACTGCGTTGAAGCGA 61.221 55.000 0.00 0.00 40.67 4.93
3377 4734 1.205064 CCAGAACTGCGTTGAAGCG 59.795 57.895 0.00 0.00 40.67 4.68
3378 4735 1.576421 CCCAGAACTGCGTTGAAGC 59.424 57.895 0.00 0.00 37.71 3.86
3379 4736 1.856265 GCCCCAGAACTGCGTTGAAG 61.856 60.000 0.00 0.00 0.00 3.02
3380 4737 1.896660 GCCCCAGAACTGCGTTGAA 60.897 57.895 0.00 0.00 0.00 2.69
3381 4738 2.281484 GCCCCAGAACTGCGTTGA 60.281 61.111 0.00 0.00 0.00 3.18
3382 4739 3.726517 CGCCCCAGAACTGCGTTG 61.727 66.667 0.00 0.00 43.12 4.10
3386 4743 1.302511 TCTTTCGCCCCAGAACTGC 60.303 57.895 0.00 0.00 0.00 4.40
3387 4744 0.250295 TGTCTTTCGCCCCAGAACTG 60.250 55.000 0.00 0.00 0.00 3.16
3388 4745 0.250338 GTGTCTTTCGCCCCAGAACT 60.250 55.000 0.00 0.00 0.00 3.01
3389 4746 1.235281 GGTGTCTTTCGCCCCAGAAC 61.235 60.000 0.00 0.00 40.57 3.01
3390 4747 1.072505 GGTGTCTTTCGCCCCAGAA 59.927 57.895 0.00 0.00 40.57 3.02
3391 4748 2.747686 GGTGTCTTTCGCCCCAGA 59.252 61.111 0.00 0.00 40.57 3.86
3396 4753 2.943653 CGTTGGGTGTCTTTCGCC 59.056 61.111 0.00 0.00 45.27 5.54
3397 4754 2.251371 GCGTTGGGTGTCTTTCGC 59.749 61.111 0.00 0.00 37.17 4.70
3398 4755 2.549282 CGCGTTGGGTGTCTTTCG 59.451 61.111 0.00 0.00 0.00 3.46
3399 4756 1.441732 AACCGCGTTGGGTGTCTTTC 61.442 55.000 4.92 0.00 44.64 2.62
3400 4757 1.441732 GAACCGCGTTGGGTGTCTTT 61.442 55.000 4.92 0.00 38.35 2.52
3401 4758 1.890510 GAACCGCGTTGGGTGTCTT 60.891 57.895 4.92 0.00 38.35 3.01
3402 4759 2.280592 GAACCGCGTTGGGTGTCT 60.281 61.111 4.92 0.00 38.35 3.41
3403 4760 2.280592 AGAACCGCGTTGGGTGTC 60.281 61.111 4.92 0.00 38.35 3.67
3404 4761 2.030490 TACAGAACCGCGTTGGGTGT 62.030 55.000 4.92 4.47 38.35 4.16
3405 4762 0.672401 ATACAGAACCGCGTTGGGTG 60.672 55.000 4.92 0.00 38.35 4.61
3406 4763 0.390735 GATACAGAACCGCGTTGGGT 60.391 55.000 4.92 0.00 44.44 4.51
3407 4764 1.418342 CGATACAGAACCGCGTTGGG 61.418 60.000 4.92 0.00 44.64 4.12
3408 4765 1.995991 CGATACAGAACCGCGTTGG 59.004 57.895 4.92 0.00 46.41 3.77
3409 4766 1.343821 GCGATACAGAACCGCGTTG 59.656 57.895 4.92 0.09 39.54 4.10
3410 4767 3.776656 GCGATACAGAACCGCGTT 58.223 55.556 4.92 0.00 39.54 4.84
3414 4771 0.914551 CGTTGAGCGATACAGAACCG 59.085 55.000 0.00 0.00 44.77 4.44
3415 4772 0.645868 GCGTTGAGCGATACAGAACC 59.354 55.000 0.00 0.00 44.77 3.62
3427 4784 1.798813 GTAACCCAGAACTGCGTTGAG 59.201 52.381 13.04 0.00 34.00 3.02
3428 4785 1.414919 AGTAACCCAGAACTGCGTTGA 59.585 47.619 13.04 0.00 34.00 3.18
3429 4786 1.878953 AGTAACCCAGAACTGCGTTG 58.121 50.000 13.04 0.00 34.00 4.10
3430 4787 2.490991 GAAGTAACCCAGAACTGCGTT 58.509 47.619 9.30 9.30 35.89 4.84
3431 4788 1.604693 CGAAGTAACCCAGAACTGCGT 60.605 52.381 0.00 0.00 39.47 5.24
3432 4789 1.068474 CGAAGTAACCCAGAACTGCG 58.932 55.000 0.00 0.00 38.35 5.18
3433 4790 1.798813 CACGAAGTAACCCAGAACTGC 59.201 52.381 0.00 0.00 41.61 4.40
3434 4791 2.224209 ACCACGAAGTAACCCAGAACTG 60.224 50.000 0.00 0.00 41.61 3.16
3435 4792 2.044758 ACCACGAAGTAACCCAGAACT 58.955 47.619 0.00 0.00 41.61 3.01
3436 4793 2.140717 CACCACGAAGTAACCCAGAAC 58.859 52.381 0.00 0.00 41.61 3.01
3437 4794 1.541670 GCACCACGAAGTAACCCAGAA 60.542 52.381 0.00 0.00 41.61 3.02
3438 4795 0.034337 GCACCACGAAGTAACCCAGA 59.966 55.000 0.00 0.00 41.61 3.86
3439 4796 2.540145 GCACCACGAAGTAACCCAG 58.460 57.895 0.00 0.00 41.61 4.45
3440 4797 4.783667 GCACCACGAAGTAACCCA 57.216 55.556 0.00 0.00 41.61 4.51
3456 4813 3.850092 GAAAACGTGTCCGCACCGC 62.850 63.158 0.00 0.00 42.39 5.68
3457 4814 2.154427 GAGAAAACGTGTCCGCACCG 62.154 60.000 0.00 0.00 42.39 4.94
3458 4815 0.878961 AGAGAAAACGTGTCCGCACC 60.879 55.000 0.00 0.00 42.39 5.01
3459 4816 0.507358 GAGAGAAAACGTGTCCGCAC 59.493 55.000 0.00 0.00 41.97 5.34
3460 4817 0.937699 CGAGAGAAAACGTGTCCGCA 60.938 55.000 0.00 0.00 37.70 5.69
3461 4818 1.773496 CGAGAGAAAACGTGTCCGC 59.227 57.895 0.00 0.00 37.70 5.54
3462 4819 0.937699 TGCGAGAGAAAACGTGTCCG 60.938 55.000 0.00 0.00 40.83 4.79
3463 4820 1.214367 TTGCGAGAGAAAACGTGTCC 58.786 50.000 0.00 0.00 0.00 4.02
3470 4827 4.188462 TGTCTTCTGTTTGCGAGAGAAAA 58.812 39.130 0.00 0.00 37.22 2.29
3471 4828 3.792401 TGTCTTCTGTTTGCGAGAGAAA 58.208 40.909 0.00 0.00 37.22 2.52
3472 4829 3.452755 TGTCTTCTGTTTGCGAGAGAA 57.547 42.857 0.00 0.64 35.47 2.87
3473 4830 3.452755 TTGTCTTCTGTTTGCGAGAGA 57.547 42.857 0.00 0.00 0.00 3.10
3474 4831 4.034510 ACTTTTGTCTTCTGTTTGCGAGAG 59.965 41.667 0.00 0.00 0.00 3.20
3475 4832 3.938963 ACTTTTGTCTTCTGTTTGCGAGA 59.061 39.130 0.00 0.00 0.00 4.04
3476 4833 4.031028 CACTTTTGTCTTCTGTTTGCGAG 58.969 43.478 0.00 0.00 0.00 5.03
3477 4834 3.687212 TCACTTTTGTCTTCTGTTTGCGA 59.313 39.130 0.00 0.00 0.00 5.10
3478 4835 4.014847 TCACTTTTGTCTTCTGTTTGCG 57.985 40.909 0.00 0.00 0.00 4.85
3479 4836 5.640732 TCTTCACTTTTGTCTTCTGTTTGC 58.359 37.500 0.00 0.00 0.00 3.68
3480 4837 7.076842 TCTCTTCACTTTTGTCTTCTGTTTG 57.923 36.000 0.00 0.00 0.00 2.93
3481 4838 7.872113 ATCTCTTCACTTTTGTCTTCTGTTT 57.128 32.000 0.00 0.00 0.00 2.83
3482 4839 7.872113 AATCTCTTCACTTTTGTCTTCTGTT 57.128 32.000 0.00 0.00 0.00 3.16
3483 4840 7.337942 ACAAATCTCTTCACTTTTGTCTTCTGT 59.662 33.333 0.00 0.00 37.67 3.41
3484 4841 7.642978 CACAAATCTCTTCACTTTTGTCTTCTG 59.357 37.037 0.00 0.00 39.55 3.02
3485 4842 7.554118 TCACAAATCTCTTCACTTTTGTCTTCT 59.446 33.333 0.00 0.00 39.55 2.85
3486 4843 7.697691 TCACAAATCTCTTCACTTTTGTCTTC 58.302 34.615 0.00 0.00 39.55 2.87
3487 4844 7.554118 TCTCACAAATCTCTTCACTTTTGTCTT 59.446 33.333 0.00 0.00 39.55 3.01
3488 4845 7.050377 TCTCACAAATCTCTTCACTTTTGTCT 58.950 34.615 0.00 0.00 39.55 3.41
3489 4846 7.011857 ACTCTCACAAATCTCTTCACTTTTGTC 59.988 37.037 0.00 0.00 39.55 3.18
3490 4847 6.825721 ACTCTCACAAATCTCTTCACTTTTGT 59.174 34.615 0.00 0.00 41.58 2.83
3491 4848 7.226325 AGACTCTCACAAATCTCTTCACTTTTG 59.774 37.037 0.00 0.00 35.66 2.44
3492 4849 7.226325 CAGACTCTCACAAATCTCTTCACTTTT 59.774 37.037 0.00 0.00 0.00 2.27
3493 4850 6.705381 CAGACTCTCACAAATCTCTTCACTTT 59.295 38.462 0.00 0.00 0.00 2.66
3494 4851 6.222389 CAGACTCTCACAAATCTCTTCACTT 58.778 40.000 0.00 0.00 0.00 3.16
3495 4852 5.279406 CCAGACTCTCACAAATCTCTTCACT 60.279 44.000 0.00 0.00 0.00 3.41
3496 4853 4.928615 CCAGACTCTCACAAATCTCTTCAC 59.071 45.833 0.00 0.00 0.00 3.18
3497 4854 4.835056 TCCAGACTCTCACAAATCTCTTCA 59.165 41.667 0.00 0.00 0.00 3.02
3498 4855 5.167845 GTCCAGACTCTCACAAATCTCTTC 58.832 45.833 0.00 0.00 0.00 2.87
3499 4856 4.020662 GGTCCAGACTCTCACAAATCTCTT 60.021 45.833 0.00 0.00 0.00 2.85
3500 4857 3.513515 GGTCCAGACTCTCACAAATCTCT 59.486 47.826 0.00 0.00 0.00 3.10
3501 4858 3.674682 CGGTCCAGACTCTCACAAATCTC 60.675 52.174 0.00 0.00 0.00 2.75
3502 4859 2.232452 CGGTCCAGACTCTCACAAATCT 59.768 50.000 0.00 0.00 0.00 2.40
3503 4860 2.231478 TCGGTCCAGACTCTCACAAATC 59.769 50.000 0.00 0.00 0.00 2.17
3504 4861 2.248248 TCGGTCCAGACTCTCACAAAT 58.752 47.619 0.00 0.00 0.00 2.32
3505 4862 1.699730 TCGGTCCAGACTCTCACAAA 58.300 50.000 0.00 0.00 0.00 2.83
3506 4863 1.819288 GATCGGTCCAGACTCTCACAA 59.181 52.381 0.00 0.00 0.00 3.33
3507 4864 1.464734 GATCGGTCCAGACTCTCACA 58.535 55.000 0.00 0.00 0.00 3.58
3508 4865 0.741915 GGATCGGTCCAGACTCTCAC 59.258 60.000 10.69 0.00 44.42 3.51
3509 4866 3.192799 GGATCGGTCCAGACTCTCA 57.807 57.895 10.69 0.00 44.42 3.27
3516 4873 2.298158 CGGACTTGGGATCGGTCCAG 62.298 65.000 18.43 8.91 46.93 3.86
3517 4874 2.355986 CGGACTTGGGATCGGTCCA 61.356 63.158 18.43 2.38 46.93 4.02
3518 4875 1.896122 AACGGACTTGGGATCGGTCC 61.896 60.000 6.02 6.02 44.16 4.46
3519 4876 0.036671 AAACGGACTTGGGATCGGTC 60.037 55.000 0.00 0.00 0.00 4.79
3520 4877 0.036671 GAAACGGACTTGGGATCGGT 60.037 55.000 0.00 0.00 0.00 4.69
3521 4878 0.249398 AGAAACGGACTTGGGATCGG 59.751 55.000 0.00 0.00 0.00 4.18
3522 4879 1.067142 TCAGAAACGGACTTGGGATCG 60.067 52.381 0.00 0.00 0.00 3.69
3523 4880 2.028020 AGTCAGAAACGGACTTGGGATC 60.028 50.000 0.00 0.00 42.77 3.36
3524 4881 1.978580 AGTCAGAAACGGACTTGGGAT 59.021 47.619 0.00 0.00 42.77 3.85
3525 4882 1.070134 CAGTCAGAAACGGACTTGGGA 59.930 52.381 0.00 0.00 42.77 4.37
3526 4883 1.512926 CAGTCAGAAACGGACTTGGG 58.487 55.000 0.00 0.00 42.77 4.12
3527 4884 0.868406 GCAGTCAGAAACGGACTTGG 59.132 55.000 0.00 0.00 42.77 3.61
3528 4885 0.868406 GGCAGTCAGAAACGGACTTG 59.132 55.000 0.00 0.00 42.77 3.16
3529 4886 0.250338 GGGCAGTCAGAAACGGACTT 60.250 55.000 0.00 0.00 42.77 3.01
3530 4887 1.122019 AGGGCAGTCAGAAACGGACT 61.122 55.000 0.00 0.00 46.11 3.85
3531 4888 0.951040 CAGGGCAGTCAGAAACGGAC 60.951 60.000 0.00 0.00 35.50 4.79
3532 4889 1.371183 CAGGGCAGTCAGAAACGGA 59.629 57.895 0.00 0.00 0.00 4.69
3533 4890 1.672356 CCAGGGCAGTCAGAAACGG 60.672 63.158 0.00 0.00 0.00 4.44
3534 4891 2.328099 GCCAGGGCAGTCAGAAACG 61.328 63.158 5.20 0.00 41.49 3.60
3535 4892 1.973812 GGCCAGGGCAGTCAGAAAC 60.974 63.158 13.10 0.00 44.11 2.78
3536 4893 2.436109 GGCCAGGGCAGTCAGAAA 59.564 61.111 13.10 0.00 44.11 2.52
3537 4894 3.650950 GGGCCAGGGCAGTCAGAA 61.651 66.667 16.36 0.00 44.11 3.02
3538 4895 4.980592 TGGGCCAGGGCAGTCAGA 62.981 66.667 16.36 0.00 44.11 3.27
3539 4896 4.729918 GTGGGCCAGGGCAGTCAG 62.730 72.222 16.36 0.00 44.11 3.51
3543 4900 4.619320 TTTGGTGGGCCAGGGCAG 62.619 66.667 16.36 0.00 46.91 4.85
3544 4901 3.703513 TTTTTGGTGGGCCAGGGCA 62.704 57.895 16.36 0.00 46.91 5.36
3545 4902 2.846754 TTTTTGGTGGGCCAGGGC 60.847 61.111 6.40 3.77 46.91 5.19
3546 4903 2.515979 GGTTTTTGGTGGGCCAGGG 61.516 63.158 6.40 0.00 46.91 4.45
3547 4904 1.764054 TGGTTTTTGGTGGGCCAGG 60.764 57.895 6.40 0.00 46.91 4.45
3548 4905 1.048160 AGTGGTTTTTGGTGGGCCAG 61.048 55.000 6.40 0.00 46.91 4.85
3549 4906 1.002274 AGTGGTTTTTGGTGGGCCA 59.998 52.632 0.00 0.00 44.38 5.36
3550 4907 1.745890 GAGTGGTTTTTGGTGGGCC 59.254 57.895 0.00 0.00 0.00 5.80
3551 4908 1.745890 GGAGTGGTTTTTGGTGGGC 59.254 57.895 0.00 0.00 0.00 5.36
3552 4909 1.118965 GGGGAGTGGTTTTTGGTGGG 61.119 60.000 0.00 0.00 0.00 4.61
3553 4910 0.105709 AGGGGAGTGGTTTTTGGTGG 60.106 55.000 0.00 0.00 0.00 4.61
3554 4911 1.788229 AAGGGGAGTGGTTTTTGGTG 58.212 50.000 0.00 0.00 0.00 4.17
3555 4912 2.394632 GAAAGGGGAGTGGTTTTTGGT 58.605 47.619 0.00 0.00 0.00 3.67
3556 4913 1.691976 GGAAAGGGGAGTGGTTTTTGG 59.308 52.381 0.00 0.00 0.00 3.28
3557 4914 1.339929 CGGAAAGGGGAGTGGTTTTTG 59.660 52.381 0.00 0.00 0.00 2.44
3558 4915 1.215924 TCGGAAAGGGGAGTGGTTTTT 59.784 47.619 0.00 0.00 0.00 1.94
3559 4916 0.848053 TCGGAAAGGGGAGTGGTTTT 59.152 50.000 0.00 0.00 0.00 2.43
3560 4917 0.400594 CTCGGAAAGGGGAGTGGTTT 59.599 55.000 0.00 0.00 0.00 3.27
3561 4918 0.767060 ACTCGGAAAGGGGAGTGGTT 60.767 55.000 0.00 0.00 41.71 3.67
3562 4919 0.767060 AACTCGGAAAGGGGAGTGGT 60.767 55.000 0.00 0.00 42.42 4.16
3563 4920 1.272807 TAACTCGGAAAGGGGAGTGG 58.727 55.000 0.00 0.00 42.42 4.00
3564 4921 2.481449 CGATAACTCGGAAAGGGGAGTG 60.481 54.545 0.00 0.00 42.42 3.51
3565 4922 1.755380 CGATAACTCGGAAAGGGGAGT 59.245 52.381 0.00 0.00 45.01 3.85
3566 4923 2.029623 TCGATAACTCGGAAAGGGGAG 58.970 52.381 0.00 0.00 45.10 4.30
3567 4924 1.753073 GTCGATAACTCGGAAAGGGGA 59.247 52.381 0.00 0.00 45.10 4.81
3568 4925 1.202498 GGTCGATAACTCGGAAAGGGG 60.202 57.143 0.00 0.00 45.10 4.79
3569 4926 1.479323 TGGTCGATAACTCGGAAAGGG 59.521 52.381 0.00 0.00 45.10 3.95
3570 4927 2.810650 CTGGTCGATAACTCGGAAAGG 58.189 52.381 0.00 0.00 45.10 3.11
3571 4928 2.194271 GCTGGTCGATAACTCGGAAAG 58.806 52.381 0.00 0.00 45.10 2.62
3572 4929 1.468565 CGCTGGTCGATAACTCGGAAA 60.469 52.381 0.00 0.00 45.10 3.13
3573 4930 0.099968 CGCTGGTCGATAACTCGGAA 59.900 55.000 0.00 0.00 45.10 4.30
3574 4931 1.725665 CGCTGGTCGATAACTCGGA 59.274 57.895 0.00 0.00 45.10 4.55
3575 4932 1.944676 GCGCTGGTCGATAACTCGG 60.945 63.158 0.00 0.00 45.10 4.63
3576 4933 1.944676 GGCGCTGGTCGATAACTCG 60.945 63.158 7.64 0.00 46.41 4.18
3577 4934 1.944676 CGGCGCTGGTCGATAACTC 60.945 63.158 8.83 0.00 46.20 3.01
3578 4935 2.104331 CGGCGCTGGTCGATAACT 59.896 61.111 8.83 0.00 46.20 2.24
3579 4936 3.627218 GCGGCGCTGGTCGATAAC 61.627 66.667 26.86 0.00 46.20 1.89
3580 4937 3.365291 AAGCGGCGCTGGTCGATAA 62.365 57.895 37.09 0.00 40.05 1.75
3581 4938 3.768185 GAAGCGGCGCTGGTCGATA 62.768 63.158 37.09 0.00 40.05 2.92
3585 4942 4.742201 TCTGAAGCGGCGCTGGTC 62.742 66.667 37.09 29.08 39.62 4.02
3586 4943 4.749310 CTCTGAAGCGGCGCTGGT 62.749 66.667 37.09 21.96 39.62 4.00
3591 4948 3.997064 CTGACCCTCTGAAGCGGCG 62.997 68.421 0.51 0.51 0.00 6.46
3592 4949 2.125350 CTGACCCTCTGAAGCGGC 60.125 66.667 0.00 0.00 0.00 6.53
3593 4950 2.125350 GCTGACCCTCTGAAGCGG 60.125 66.667 0.00 0.00 0.00 5.52
3594 4951 0.739112 GAAGCTGACCCTCTGAAGCG 60.739 60.000 0.00 0.00 40.63 4.68
3595 4952 0.392327 GGAAGCTGACCCTCTGAAGC 60.392 60.000 0.00 0.00 35.86 3.86
3596 4953 0.108424 CGGAAGCTGACCCTCTGAAG 60.108 60.000 4.88 0.00 0.00 3.02
3597 4954 1.975327 CGGAAGCTGACCCTCTGAA 59.025 57.895 4.88 0.00 0.00 3.02
3598 4955 3.700109 CGGAAGCTGACCCTCTGA 58.300 61.111 4.88 0.00 0.00 3.27
3616 4973 3.908081 GCTGGCGGGGCATGAATG 61.908 66.667 0.00 0.00 0.00 2.67
3638 4995 3.240134 AGCCAATGCCGACGTGAGT 62.240 57.895 0.00 0.00 44.06 3.41
3639 4996 2.434884 AGCCAATGCCGACGTGAG 60.435 61.111 0.00 0.00 38.69 3.51
3640 4997 2.741985 CAGCCAATGCCGACGTGA 60.742 61.111 0.00 0.00 38.69 4.35
3641 4998 2.741985 TCAGCCAATGCCGACGTG 60.742 61.111 0.00 0.00 38.69 4.49
3642 4999 2.434884 CTCAGCCAATGCCGACGT 60.435 61.111 0.00 0.00 38.69 4.34
3643 5000 2.125552 TCTCAGCCAATGCCGACG 60.126 61.111 0.00 0.00 38.69 5.12
3644 5001 0.809241 CTCTCTCAGCCAATGCCGAC 60.809 60.000 0.00 0.00 38.69 4.79
3645 5002 1.519246 CTCTCTCAGCCAATGCCGA 59.481 57.895 0.00 0.00 38.69 5.54
3646 5003 2.178890 GCTCTCTCAGCCAATGCCG 61.179 63.158 0.00 0.00 43.17 5.69
3647 5004 2.178890 CGCTCTCTCAGCCAATGCC 61.179 63.158 0.00 0.00 46.74 4.40
3648 5005 2.821688 GCGCTCTCTCAGCCAATGC 61.822 63.158 0.00 0.00 46.74 3.56
3649 5006 3.407657 GCGCTCTCTCAGCCAATG 58.592 61.111 0.00 0.00 46.74 2.82
3676 5033 2.031012 CGTCTGCACTGGGAAGCA 59.969 61.111 0.00 0.00 39.25 3.91
3677 5034 2.029844 GTCGTCTGCACTGGGAAGC 61.030 63.158 0.00 0.00 0.00 3.86
3678 5035 0.668706 CTGTCGTCTGCACTGGGAAG 60.669 60.000 0.00 0.00 0.00 3.46
3679 5036 1.367471 CTGTCGTCTGCACTGGGAA 59.633 57.895 0.00 0.00 0.00 3.97
3680 5037 3.051210 CTGTCGTCTGCACTGGGA 58.949 61.111 0.00 0.00 0.00 4.37
3681 5038 2.740055 GCTGTCGTCTGCACTGGG 60.740 66.667 6.65 0.00 38.20 4.45
3682 5039 2.740055 GGCTGTCGTCTGCACTGG 60.740 66.667 12.85 0.00 39.69 4.00
3683 5040 2.029518 TGGCTGTCGTCTGCACTG 59.970 61.111 12.85 0.00 39.69 3.66
3684 5041 2.029666 GTGGCTGTCGTCTGCACT 59.970 61.111 12.85 0.00 39.69 4.40
3685 5042 3.406361 CGTGGCTGTCGTCTGCAC 61.406 66.667 12.85 8.35 39.69 4.57
3689 5046 4.280494 AACGCGTGGCTGTCGTCT 62.280 61.111 14.98 0.00 35.18 4.18
3690 5047 3.764049 GAACGCGTGGCTGTCGTC 61.764 66.667 14.98 0.00 35.18 4.20
3691 5048 4.578898 TGAACGCGTGGCTGTCGT 62.579 61.111 14.98 0.00 38.15 4.34
3692 5049 2.876879 TTTGAACGCGTGGCTGTCG 61.877 57.895 14.98 0.00 0.00 4.35
3693 5050 1.368850 GTTTGAACGCGTGGCTGTC 60.369 57.895 14.98 6.74 0.00 3.51
3694 5051 2.713154 GTTTGAACGCGTGGCTGT 59.287 55.556 14.98 0.00 0.00 4.40
3695 5052 2.425124 CGTTTGAACGCGTGGCTG 60.425 61.111 14.98 0.00 46.06 4.85
3704 5061 0.590481 GGTTGGCGTGTCGTTTGAAC 60.590 55.000 0.00 0.00 0.00 3.18
3705 5062 1.025113 TGGTTGGCGTGTCGTTTGAA 61.025 50.000 0.00 0.00 0.00 2.69
3706 5063 1.449778 TGGTTGGCGTGTCGTTTGA 60.450 52.632 0.00 0.00 0.00 2.69
3707 5064 1.298041 GTGGTTGGCGTGTCGTTTG 60.298 57.895 0.00 0.00 0.00 2.93
3708 5065 2.474612 GGTGGTTGGCGTGTCGTTT 61.475 57.895 0.00 0.00 0.00 3.60
3709 5066 2.898343 GGTGGTTGGCGTGTCGTT 60.898 61.111 0.00 0.00 0.00 3.85
3710 5067 3.857038 AGGTGGTTGGCGTGTCGT 61.857 61.111 0.00 0.00 0.00 4.34
3711 5068 3.345808 CAGGTGGTTGGCGTGTCG 61.346 66.667 0.00 0.00 0.00 4.35
3712 5069 1.782028 GAACAGGTGGTTGGCGTGTC 61.782 60.000 0.00 0.00 40.63 3.67
3713 5070 1.822186 GAACAGGTGGTTGGCGTGT 60.822 57.895 0.00 0.00 40.63 4.49
3714 5071 2.892334 CGAACAGGTGGTTGGCGTG 61.892 63.158 0.00 0.00 40.63 5.34
3715 5072 2.590575 CGAACAGGTGGTTGGCGT 60.591 61.111 0.00 0.00 40.63 5.68
3716 5073 2.590575 ACGAACAGGTGGTTGGCG 60.591 61.111 0.00 0.00 40.63 5.69
3717 5074 1.227853 AGACGAACAGGTGGTTGGC 60.228 57.895 0.00 0.00 40.63 4.52
3718 5075 0.179056 ACAGACGAACAGGTGGTTGG 60.179 55.000 0.00 0.00 40.63 3.77
3719 5076 1.202533 AGACAGACGAACAGGTGGTTG 60.203 52.381 0.00 0.00 40.63 3.77
3720 5077 1.120530 AGACAGACGAACAGGTGGTT 58.879 50.000 0.00 0.00 44.10 3.67
3721 5078 0.389391 CAGACAGACGAACAGGTGGT 59.611 55.000 0.00 0.00 0.00 4.16
3722 5079 0.946221 GCAGACAGACGAACAGGTGG 60.946 60.000 0.00 0.00 0.00 4.61
3723 5080 0.946221 GGCAGACAGACGAACAGGTG 60.946 60.000 0.00 0.00 0.00 4.00
3724 5081 1.115930 AGGCAGACAGACGAACAGGT 61.116 55.000 0.00 0.00 0.00 4.00
3725 5082 0.389166 GAGGCAGACAGACGAACAGG 60.389 60.000 0.00 0.00 0.00 4.00
3726 5083 0.389166 GGAGGCAGACAGACGAACAG 60.389 60.000 0.00 0.00 0.00 3.16
3727 5084 1.666011 GGAGGCAGACAGACGAACA 59.334 57.895 0.00 0.00 0.00 3.18
3728 5085 1.079750 GGGAGGCAGACAGACGAAC 60.080 63.158 0.00 0.00 0.00 3.95
3729 5086 2.636412 CGGGAGGCAGACAGACGAA 61.636 63.158 0.00 0.00 0.00 3.85
3730 5087 3.062466 CGGGAGGCAGACAGACGA 61.062 66.667 0.00 0.00 0.00 4.20
3731 5088 4.803426 GCGGGAGGCAGACAGACG 62.803 72.222 0.00 0.00 42.87 4.18
3740 5097 3.599704 GCCATCAATGCGGGAGGC 61.600 66.667 0.00 0.00 43.96 4.70
3741 5098 1.529948 ATGCCATCAATGCGGGAGG 60.530 57.895 0.00 0.00 0.00 4.30
3742 5099 1.658114 CATGCCATCAATGCGGGAG 59.342 57.895 0.00 0.00 0.00 4.30
3743 5100 2.491897 GCATGCCATCAATGCGGGA 61.492 57.895 6.36 0.00 0.00 5.14
3744 5101 2.028484 GCATGCCATCAATGCGGG 59.972 61.111 6.36 0.00 0.00 6.13
3747 5104 0.385029 TAACCGCATGCCATCAATGC 59.615 50.000 13.15 0.00 37.91 3.56
3748 5105 1.269206 GGTAACCGCATGCCATCAATG 60.269 52.381 13.15 0.00 0.00 2.82
3749 5106 1.032014 GGTAACCGCATGCCATCAAT 58.968 50.000 13.15 0.00 0.00 2.57
3750 5107 1.372838 CGGTAACCGCATGCCATCAA 61.373 55.000 13.15 0.00 41.17 2.57
3751 5108 1.817520 CGGTAACCGCATGCCATCA 60.818 57.895 13.15 0.00 41.17 3.07
3752 5109 3.022287 CGGTAACCGCATGCCATC 58.978 61.111 13.15 0.00 41.17 3.51
3762 5119 2.050934 AGGAGACGCCTCGGTAACC 61.051 63.158 0.00 0.00 46.97 2.85
3763 5120 3.600843 AGGAGACGCCTCGGTAAC 58.399 61.111 0.00 0.00 46.97 2.50
3785 5142 4.096003 AGGGATGAACGGGTGGCG 62.096 66.667 0.00 0.00 0.00 5.69
3786 5143 2.124695 GAGGGATGAACGGGTGGC 60.125 66.667 0.00 0.00 0.00 5.01
3787 5144 1.221840 CAGAGGGATGAACGGGTGG 59.778 63.158 0.00 0.00 0.00 4.61
3788 5145 1.450312 GCAGAGGGATGAACGGGTG 60.450 63.158 0.00 0.00 0.00 4.61
3789 5146 2.670148 GGCAGAGGGATGAACGGGT 61.670 63.158 0.00 0.00 0.00 5.28
3790 5147 2.190578 GGCAGAGGGATGAACGGG 59.809 66.667 0.00 0.00 0.00 5.28
3791 5148 2.202932 CGGCAGAGGGATGAACGG 60.203 66.667 0.00 0.00 0.00 4.44
3792 5149 2.892425 GCGGCAGAGGGATGAACG 60.892 66.667 0.00 0.00 0.00 3.95
3793 5150 2.514824 GGCGGCAGAGGGATGAAC 60.515 66.667 3.07 0.00 0.00 3.18
3794 5151 3.797353 GGGCGGCAGAGGGATGAA 61.797 66.667 12.47 0.00 0.00 2.57
3796 5153 3.839353 GATGGGCGGCAGAGGGATG 62.839 68.421 12.47 0.00 0.00 3.51
3797 5154 3.564218 GATGGGCGGCAGAGGGAT 61.564 66.667 12.47 0.00 0.00 3.85
3809 5166 2.277084 GGTTTATATAGCGCCGATGGG 58.723 52.381 2.29 0.00 0.00 4.00
3810 5167 1.924524 CGGTTTATATAGCGCCGATGG 59.075 52.381 2.29 0.00 44.57 3.51
3817 5174 1.076332 GGGCAGCGGTTTATATAGCG 58.924 55.000 9.95 9.95 41.61 4.26
3818 5175 1.271163 TGGGGCAGCGGTTTATATAGC 60.271 52.381 0.00 0.00 0.00 2.97
3819 5176 2.851263 TGGGGCAGCGGTTTATATAG 57.149 50.000 0.00 0.00 0.00 1.31
3820 5177 3.417101 CATTGGGGCAGCGGTTTATATA 58.583 45.455 0.00 0.00 0.00 0.86
3821 5178 2.238521 CATTGGGGCAGCGGTTTATAT 58.761 47.619 0.00 0.00 0.00 0.86
3822 5179 1.686355 CATTGGGGCAGCGGTTTATA 58.314 50.000 0.00 0.00 0.00 0.98
3823 5180 1.675720 GCATTGGGGCAGCGGTTTAT 61.676 55.000 0.00 0.00 0.00 1.40
3824 5181 2.347322 GCATTGGGGCAGCGGTTTA 61.347 57.895 0.00 0.00 0.00 2.01
3825 5182 3.694538 GCATTGGGGCAGCGGTTT 61.695 61.111 0.00 0.00 0.00 3.27
3830 5187 4.764771 TCAGGGCATTGGGGCAGC 62.765 66.667 0.00 0.00 45.66 5.25
3831 5188 2.131709 CATCAGGGCATTGGGGCAG 61.132 63.158 0.00 0.00 45.66 4.85
3832 5189 2.042741 CATCAGGGCATTGGGGCA 60.043 61.111 0.00 0.00 45.66 5.36
3833 5190 2.645394 TAGCATCAGGGCATTGGGGC 62.645 60.000 0.00 0.00 42.44 5.80
3834 5191 0.113776 ATAGCATCAGGGCATTGGGG 59.886 55.000 0.00 0.00 35.83 4.96
3835 5192 2.040813 AGTATAGCATCAGGGCATTGGG 59.959 50.000 0.00 0.00 35.83 4.12
3836 5193 3.430042 AGTATAGCATCAGGGCATTGG 57.570 47.619 0.00 0.00 35.83 3.16
3837 5194 9.836864 TTTATATAGTATAGCATCAGGGCATTG 57.163 33.333 0.00 0.00 35.83 2.82
3838 5195 9.838339 GTTTATATAGTATAGCATCAGGGCATT 57.162 33.333 0.00 0.00 35.83 3.56
3839 5196 8.432805 GGTTTATATAGTATAGCATCAGGGCAT 58.567 37.037 0.00 0.00 35.83 4.40
3840 5197 7.417456 CGGTTTATATAGTATAGCATCAGGGCA 60.417 40.741 0.00 0.00 35.83 5.36
3841 5198 6.924060 CGGTTTATATAGTATAGCATCAGGGC 59.076 42.308 0.00 0.00 0.00 5.19
3842 5199 7.069578 ACCGGTTTATATAGTATAGCATCAGGG 59.930 40.741 0.00 0.00 0.00 4.45
3843 5200 7.921214 CACCGGTTTATATAGTATAGCATCAGG 59.079 40.741 2.97 0.00 0.00 3.86
3844 5201 7.435488 GCACCGGTTTATATAGTATAGCATCAG 59.565 40.741 2.97 0.00 0.00 2.90
3845 5202 7.123697 AGCACCGGTTTATATAGTATAGCATCA 59.876 37.037 2.97 0.00 0.00 3.07
3846 5203 7.490000 AGCACCGGTTTATATAGTATAGCATC 58.510 38.462 2.97 0.00 0.00 3.91
3847 5204 7.419711 AGCACCGGTTTATATAGTATAGCAT 57.580 36.000 2.97 0.00 0.00 3.79
3848 5205 6.845758 AGCACCGGTTTATATAGTATAGCA 57.154 37.500 2.97 0.00 0.00 3.49
3849 5206 6.471519 CGAAGCACCGGTTTATATAGTATAGC 59.528 42.308 2.97 0.00 0.00 2.97
3850 5207 6.971184 CCGAAGCACCGGTTTATATAGTATAG 59.029 42.308 2.97 0.00 44.23 1.31
3851 5208 6.855836 CCGAAGCACCGGTTTATATAGTATA 58.144 40.000 2.97 0.00 44.23 1.47
3852 5209 5.717119 CCGAAGCACCGGTTTATATAGTAT 58.283 41.667 2.97 0.00 44.23 2.12
3853 5210 5.125100 CCGAAGCACCGGTTTATATAGTA 57.875 43.478 2.97 0.00 44.23 1.82
3854 5211 3.986277 CCGAAGCACCGGTTTATATAGT 58.014 45.455 2.97 0.00 44.23 2.12
3865 5222 1.883084 GGCTATGACCGAAGCACCG 60.883 63.158 0.00 0.00 40.61 4.94
3866 5223 0.811616 CTGGCTATGACCGAAGCACC 60.812 60.000 0.00 0.00 40.61 5.01
3867 5224 0.108138 ACTGGCTATGACCGAAGCAC 60.108 55.000 0.00 0.00 40.61 4.40
3868 5225 0.175760 GACTGGCTATGACCGAAGCA 59.824 55.000 0.00 0.00 40.61 3.91
3869 5226 0.175760 TGACTGGCTATGACCGAAGC 59.824 55.000 0.00 0.00 38.03 3.86
3870 5227 2.546795 GGATGACTGGCTATGACCGAAG 60.547 54.545 0.00 0.00 0.00 3.79
3871 5228 1.412710 GGATGACTGGCTATGACCGAA 59.587 52.381 0.00 0.00 0.00 4.30
3872 5229 1.040646 GGATGACTGGCTATGACCGA 58.959 55.000 0.00 0.00 0.00 4.69
3873 5230 0.034059 GGGATGACTGGCTATGACCG 59.966 60.000 0.00 0.00 0.00 4.79
3874 5231 1.346068 GAGGGATGACTGGCTATGACC 59.654 57.143 0.00 0.00 0.00 4.02
3875 5232 2.298729 GAGAGGGATGACTGGCTATGAC 59.701 54.545 0.00 0.00 0.00 3.06
3876 5233 2.603021 GAGAGGGATGACTGGCTATGA 58.397 52.381 0.00 0.00 0.00 2.15
3877 5234 1.622811 GGAGAGGGATGACTGGCTATG 59.377 57.143 0.00 0.00 0.00 2.23
3878 5235 1.221523 TGGAGAGGGATGACTGGCTAT 59.778 52.381 0.00 0.00 0.00 2.97
3879 5236 0.636647 TGGAGAGGGATGACTGGCTA 59.363 55.000 0.00 0.00 0.00 3.93
3880 5237 0.980231 GTGGAGAGGGATGACTGGCT 60.980 60.000 0.00 0.00 0.00 4.75
3881 5238 1.267574 TGTGGAGAGGGATGACTGGC 61.268 60.000 0.00 0.00 0.00 4.85
3882 5239 0.539051 GTGTGGAGAGGGATGACTGG 59.461 60.000 0.00 0.00 0.00 4.00
3883 5240 0.539051 GGTGTGGAGAGGGATGACTG 59.461 60.000 0.00 0.00 0.00 3.51
3884 5241 0.117140 TGGTGTGGAGAGGGATGACT 59.883 55.000 0.00 0.00 0.00 3.41
3885 5242 1.207791 ATGGTGTGGAGAGGGATGAC 58.792 55.000 0.00 0.00 0.00 3.06
3886 5243 1.839994 GAATGGTGTGGAGAGGGATGA 59.160 52.381 0.00 0.00 0.00 2.92
3887 5244 1.561076 TGAATGGTGTGGAGAGGGATG 59.439 52.381 0.00 0.00 0.00 3.51
3888 5245 1.561542 GTGAATGGTGTGGAGAGGGAT 59.438 52.381 0.00 0.00 0.00 3.85
3889 5246 0.984230 GTGAATGGTGTGGAGAGGGA 59.016 55.000 0.00 0.00 0.00 4.20
3890 5247 0.987294 AGTGAATGGTGTGGAGAGGG 59.013 55.000 0.00 0.00 0.00 4.30
3891 5248 1.947678 GCAGTGAATGGTGTGGAGAGG 60.948 57.143 0.00 0.00 0.00 3.69
3892 5249 1.446907 GCAGTGAATGGTGTGGAGAG 58.553 55.000 0.00 0.00 0.00 3.20
3893 5250 0.036732 GGCAGTGAATGGTGTGGAGA 59.963 55.000 0.00 0.00 0.00 3.71
3894 5251 0.250858 TGGCAGTGAATGGTGTGGAG 60.251 55.000 0.00 0.00 0.00 3.86
3895 5252 0.405198 ATGGCAGTGAATGGTGTGGA 59.595 50.000 0.00 0.00 0.00 4.02
3896 5253 0.528924 CATGGCAGTGAATGGTGTGG 59.471 55.000 0.00 0.00 0.00 4.17
3897 5254 0.528924 CCATGGCAGTGAATGGTGTG 59.471 55.000 14.30 0.00 38.85 3.82
3898 5255 0.405198 TCCATGGCAGTGAATGGTGT 59.595 50.000 19.34 0.00 43.31 4.16
3899 5256 1.679680 GATCCATGGCAGTGAATGGTG 59.320 52.381 19.34 2.23 43.31 4.17
3900 5257 1.410648 GGATCCATGGCAGTGAATGGT 60.411 52.381 19.34 10.65 43.31 3.55
3901 5258 1.325355 GGATCCATGGCAGTGAATGG 58.675 55.000 6.96 15.77 44.06 3.16
3902 5259 1.133575 AGGGATCCATGGCAGTGAATG 60.134 52.381 15.23 0.00 0.00 2.67
3903 5260 1.144503 GAGGGATCCATGGCAGTGAAT 59.855 52.381 15.23 0.00 0.00 2.57
3904 5261 0.548031 GAGGGATCCATGGCAGTGAA 59.452 55.000 15.23 0.00 0.00 3.18
3905 5262 1.348008 GGAGGGATCCATGGCAGTGA 61.348 60.000 15.23 0.00 0.00 3.41
3906 5263 1.150081 GGAGGGATCCATGGCAGTG 59.850 63.158 15.23 0.00 0.00 3.66
3907 5264 2.446848 CGGAGGGATCCATGGCAGT 61.447 63.158 15.23 0.00 0.00 4.40
3908 5265 2.429058 CGGAGGGATCCATGGCAG 59.571 66.667 15.23 0.00 0.00 4.85
3909 5266 3.877450 GCGGAGGGATCCATGGCA 61.877 66.667 15.23 0.00 0.00 4.92
3910 5267 4.650377 GGCGGAGGGATCCATGGC 62.650 72.222 15.23 12.13 0.00 4.40
3911 5268 4.320456 CGGCGGAGGGATCCATGG 62.320 72.222 15.23 4.97 0.00 3.66
3912 5269 3.521529 GACGGCGGAGGGATCCATG 62.522 68.421 15.23 0.00 0.00 3.66
3913 5270 3.234730 GACGGCGGAGGGATCCAT 61.235 66.667 15.23 6.26 0.00 3.41
3914 5271 4.770362 TGACGGCGGAGGGATCCA 62.770 66.667 15.23 0.00 0.00 3.41
3915 5272 2.925162 CTTTGACGGCGGAGGGATCC 62.925 65.000 13.24 1.92 0.00 3.36
3916 5273 1.521681 CTTTGACGGCGGAGGGATC 60.522 63.158 13.24 0.00 0.00 3.36
3917 5274 2.584608 CTTTGACGGCGGAGGGAT 59.415 61.111 13.24 0.00 0.00 3.85
3918 5275 4.388499 GCTTTGACGGCGGAGGGA 62.388 66.667 13.24 0.00 0.00 4.20
3919 5276 4.394712 AGCTTTGACGGCGGAGGG 62.395 66.667 13.24 0.00 34.52 4.30
3920 5277 2.815647 GAGCTTTGACGGCGGAGG 60.816 66.667 13.24 0.00 34.52 4.30
3921 5278 1.807573 GAGAGCTTTGACGGCGGAG 60.808 63.158 13.24 4.63 34.52 4.63
3922 5279 2.261671 GAGAGCTTTGACGGCGGA 59.738 61.111 13.24 0.00 34.52 5.54


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.