Multiple sequence alignment - TraesCS4D01G171700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G171700 chr4D 100.000 5717 0 0 1 5717 298543384 298537668 0.000000e+00 10558.0
1 TraesCS4D01G171700 chr4B 95.229 3668 96 23 559 4200 370426908 370423294 0.000000e+00 5731.0
2 TraesCS4D01G171700 chr4B 97.677 775 15 2 4322 5093 370423297 370422523 0.000000e+00 1328.0
3 TraesCS4D01G171700 chr4B 90.041 482 28 7 5205 5682 369948083 369947618 1.760000e-169 606.0
4 TraesCS4D01G171700 chr4B 97.674 129 3 0 4197 4325 576982440 576982568 7.460000e-54 222.0
5 TraesCS4D01G171700 chr4B 95.620 137 6 0 4190 4326 82019113 82019249 2.680000e-53 220.0
6 TraesCS4D01G171700 chr4B 93.056 144 10 0 4190 4333 25944335 25944478 1.610000e-50 211.0
7 TraesCS4D01G171700 chr4B 99.123 114 1 0 5092 5205 370422287 370422174 7.510000e-49 206.0
8 TraesCS4D01G171700 chr4B 97.368 38 1 0 5680 5717 323670092 323670129 1.330000e-06 65.8
9 TraesCS4D01G171700 chr4A 95.505 1980 65 9 2011 3981 187262367 187264331 0.000000e+00 3142.0
10 TraesCS4D01G171700 chr4A 94.243 1407 40 15 547 1936 187260618 187262000 0.000000e+00 2111.0
11 TraesCS4D01G171700 chr4A 97.671 773 17 1 4322 5093 187264497 187265269 0.000000e+00 1327.0
12 TraesCS4D01G171700 chr4A 79.061 554 89 25 1 543 692678090 692677553 7.050000e-94 355.0
13 TraesCS4D01G171700 chr4A 91.935 248 8 5 5231 5471 187266345 187266587 2.550000e-88 337.0
14 TraesCS4D01G171700 chr4A 97.321 112 3 0 5092 5203 187266233 187266344 2.100000e-44 191.0
15 TraesCS4D01G171700 chr4A 83.523 176 10 2 4012 4168 187264324 187264499 4.620000e-31 147.0
16 TraesCS4D01G171700 chr4A 92.188 64 5 0 5488 5551 187583997 187583934 2.190000e-14 91.6
17 TraesCS4D01G171700 chr4A 97.368 38 1 0 5680 5717 321315789 321315826 1.330000e-06 65.8
18 TraesCS4D01G171700 chr4A 100.000 33 0 0 5685 5717 407249216 407249248 1.720000e-05 62.1
19 TraesCS4D01G171700 chr4A 85.246 61 8 1 5223 5282 644491249 644491309 1.720000e-05 62.1
20 TraesCS4D01G171700 chr5A 83.394 548 66 17 1 540 357906950 357907480 8.610000e-133 484.0
21 TraesCS4D01G171700 chr5A 87.755 49 5 1 5223 5271 688276734 688276687 8.000000e-04 56.5
22 TraesCS4D01G171700 chr5A 100.000 29 0 0 517 545 669700747 669700719 3.000000e-03 54.7
23 TraesCS4D01G171700 chr7B 82.459 553 64 24 3 543 122771382 122771913 2.430000e-123 453.0
24 TraesCS4D01G171700 chr7B 86.479 355 37 9 1 350 381483450 381483102 4.180000e-101 379.0
25 TraesCS4D01G171700 chr7B 87.234 47 6 0 493 539 591331002 591331048 3.000000e-03 54.7
26 TraesCS4D01G171700 chr5D 81.884 552 72 20 1 543 185218598 185219130 1.890000e-119 440.0
27 TraesCS4D01G171700 chr5D 92.135 89 7 0 3369 3457 354502052 354501964 6.010000e-25 126.0
28 TraesCS4D01G171700 chr5D 97.368 38 1 0 5680 5717 47676010 47676047 1.330000e-06 65.8
29 TraesCS4D01G171700 chr5B 82.353 442 49 26 1 430 595176816 595176392 1.960000e-94 357.0
30 TraesCS4D01G171700 chr5B 84.459 296 37 6 246 540 546420327 546420040 3.370000e-72 283.0
31 TraesCS4D01G171700 chr5B 94.595 148 6 2 4182 4328 96878926 96879072 1.600000e-55 228.0
32 TraesCS4D01G171700 chr5B 92.157 153 6 3 4176 4326 345346710 345346858 1.610000e-50 211.0
33 TraesCS4D01G171700 chr5B 91.304 46 3 1 5223 5268 398713676 398713720 1.720000e-05 62.1
34 TraesCS4D01G171700 chr1D 85.399 363 29 16 1 350 373065879 373066230 7.050000e-94 355.0
35 TraesCS4D01G171700 chr7D 82.995 394 45 15 156 543 19574886 19574509 2.550000e-88 337.0
36 TraesCS4D01G171700 chr6D 86.218 312 30 12 3 307 421623292 421623597 5.520000e-85 326.0
37 TraesCS4D01G171700 chr6D 97.368 38 1 0 5680 5717 199879032 199878995 1.330000e-06 65.8
38 TraesCS4D01G171700 chr3B 80.896 335 44 17 215 543 213714169 213713849 4.420000e-61 246.0
39 TraesCS4D01G171700 chr1B 97.674 129 3 0 4198 4326 277456298 277456426 7.460000e-54 222.0
40 TraesCS4D01G171700 chr1B 90.789 152 10 3 4175 4325 51400872 51400724 3.490000e-47 200.0
41 TraesCS4D01G171700 chr1B 100.000 30 0 0 5222 5251 669164165 669164194 8.000000e-04 56.5
42 TraesCS4D01G171700 chr6B 94.928 138 5 2 4193 4330 716890339 716890474 1.250000e-51 215.0
43 TraesCS4D01G171700 chr6B 97.059 34 1 0 5223 5256 165070409 165070376 2.220000e-04 58.4
44 TraesCS4D01G171700 chrUn 91.720 157 6 5 4182 4338 404804058 404803909 1.610000e-50 211.0
45 TraesCS4D01G171700 chrUn 97.059 34 1 0 5223 5256 126885315 126885282 2.220000e-04 58.4
46 TraesCS4D01G171700 chr2A 75.444 338 51 17 1163 1493 58125250 58125562 9.990000e-28 135.0
47 TraesCS4D01G171700 chr2A 97.222 36 1 0 5682 5717 173984266 173984301 1.720000e-05 62.1
48 TraesCS4D01G171700 chr2A 97.222 36 1 0 5680 5715 424913260 424913295 1.720000e-05 62.1
49 TraesCS4D01G171700 chr2D 89.524 105 10 1 2409 2512 560859499 560859603 1.290000e-26 132.0
50 TraesCS4D01G171700 chr2D 75.000 340 49 21 1163 1493 56796051 56796363 2.160000e-24 124.0
51 TraesCS4D01G171700 chr2B 74.926 339 51 17 1163 1493 90007777 90008089 2.160000e-24 124.0
52 TraesCS4D01G171700 chr2B 88.000 50 5 1 5223 5271 26302221 26302172 2.220000e-04 58.4
53 TraesCS4D01G171700 chr6A 97.368 38 1 0 5680 5717 271509991 271509954 1.330000e-06 65.8
54 TraesCS4D01G171700 chr6A 97.368 38 1 0 5680 5717 307044512 307044475 1.330000e-06 65.8
55 TraesCS4D01G171700 chr1A 100.000 32 0 0 512 543 484325680 484325711 6.190000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G171700 chr4D 298537668 298543384 5716 True 10558.000000 10558 100.000000 1 5717 1 chr4D.!!$R1 5716
1 TraesCS4D01G171700 chr4B 370422174 370426908 4734 True 2421.666667 5731 97.343000 559 5205 3 chr4B.!!$R2 4646
2 TraesCS4D01G171700 chr4A 187260618 187266587 5969 False 1209.166667 3142 93.366333 547 5471 6 chr4A.!!$F4 4924
3 TraesCS4D01G171700 chr4A 692677553 692678090 537 True 355.000000 355 79.061000 1 543 1 chr4A.!!$R2 542
4 TraesCS4D01G171700 chr5A 357906950 357907480 530 False 484.000000 484 83.394000 1 540 1 chr5A.!!$F1 539
5 TraesCS4D01G171700 chr7B 122771382 122771913 531 False 453.000000 453 82.459000 3 543 1 chr7B.!!$F1 540
6 TraesCS4D01G171700 chr5D 185218598 185219130 532 False 440.000000 440 81.884000 1 543 1 chr5D.!!$F2 542

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
322 328 0.106819 ATGTCTAGTCCTACCGCCGT 60.107 55.000 0.00 0.00 0.00 5.68 F
323 329 0.541392 TGTCTAGTCCTACCGCCGTA 59.459 55.000 0.00 0.00 0.00 4.02 F
845 870 0.829333 CTCACAGTCCCAGATCCCAG 59.171 60.000 0.00 0.00 0.00 4.45 F
908 933 1.008538 GGAAAACACACAGGCGCAG 60.009 57.895 10.83 3.04 0.00 5.18 F
2726 3062 1.003118 TCGACTTGATCCCCAAACCAG 59.997 52.381 0.00 0.00 33.76 4.00 F
4046 4384 0.325933 CTCTCTTGGCATGACACCCA 59.674 55.000 0.00 0.00 0.00 4.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1496 1525 1.050988 ATCGGAGTGTGGGGGAGATG 61.051 60.000 0.00 0.0 0.00 2.90 R
1637 1670 2.027385 CCCTAAGCTCAAGGCATTTCC 58.973 52.381 9.18 0.0 44.79 3.13 R
2726 3062 1.375013 TTCGCGGCTTACAGGGTTC 60.375 57.895 6.13 0.0 0.00 3.62 R
2954 3290 6.513180 TCAGAGAGTTAACACAAGGTTACAG 58.487 40.000 8.61 0.0 41.55 2.74 R
4198 4554 0.032813 ATTTCCGGACGGAGGGAGTA 60.033 55.000 13.64 0.0 46.06 2.59 R
5216 6540 0.035458 GCTGGCCGCTTGGTCTATAT 59.965 55.000 11.61 0.0 38.57 0.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
61 64 4.997565 AGCAAAATACATGATTCCAACCG 58.002 39.130 0.00 0.00 0.00 4.44
62 65 4.111916 GCAAAATACATGATTCCAACCGG 58.888 43.478 0.00 0.00 0.00 5.28
154 159 6.487668 TCAAGCAAATGAGTGAGATTTGAGAA 59.512 34.615 8.95 0.00 41.44 2.87
181 187 1.433199 TGTGAGGAGAAGAGGGGAGAA 59.567 52.381 0.00 0.00 0.00 2.87
182 188 2.107366 GTGAGGAGAAGAGGGGAGAAG 58.893 57.143 0.00 0.00 0.00 2.85
183 189 2.003830 TGAGGAGAAGAGGGGAGAAGA 58.996 52.381 0.00 0.00 0.00 2.87
184 190 2.589664 TGAGGAGAAGAGGGGAGAAGAT 59.410 50.000 0.00 0.00 0.00 2.40
185 191 2.965147 GAGGAGAAGAGGGGAGAAGATG 59.035 54.545 0.00 0.00 0.00 2.90
186 192 1.416030 GGAGAAGAGGGGAGAAGATGC 59.584 57.143 0.00 0.00 0.00 3.91
197 203 0.177604 AGAAGATGCCTTGAGCTCGG 59.822 55.000 9.64 6.24 44.23 4.63
218 224 3.054065 GGAAGAGTGAGAATGGGGAATGT 60.054 47.826 0.00 0.00 0.00 2.71
307 313 1.760875 TCCCTGGCGGTAGGATGTC 60.761 63.158 2.18 0.00 40.42 3.06
308 314 1.762460 CCCTGGCGGTAGGATGTCT 60.762 63.158 2.18 0.00 40.42 3.41
309 315 0.469331 CCCTGGCGGTAGGATGTCTA 60.469 60.000 2.18 0.00 40.42 2.59
310 316 0.962489 CCTGGCGGTAGGATGTCTAG 59.038 60.000 0.00 0.00 40.42 2.43
322 328 0.106819 ATGTCTAGTCCTACCGCCGT 60.107 55.000 0.00 0.00 0.00 5.68
323 329 0.541392 TGTCTAGTCCTACCGCCGTA 59.459 55.000 0.00 0.00 0.00 4.02
325 331 1.123077 TCTAGTCCTACCGCCGTAGA 58.877 55.000 13.05 0.00 44.18 2.59
326 332 1.069823 TCTAGTCCTACCGCCGTAGAG 59.930 57.143 13.05 3.65 44.18 2.43
356 364 1.282875 GTTCCTTTGCCACGTCAGC 59.717 57.895 0.04 0.04 0.00 4.26
368 376 2.735857 GTCAGCGGCCGTTAACGT 60.736 61.111 28.70 4.74 37.74 3.99
430 439 2.935481 GTAGCCTGTGTAACGCTACT 57.065 50.000 10.41 0.99 46.49 2.57
458 468 2.535588 GGCGACGGTAGCAAAAAGA 58.464 52.632 15.05 0.00 36.08 2.52
465 475 5.390613 CGACGGTAGCAAAAAGATCAAATT 58.609 37.500 0.00 0.00 0.00 1.82
467 477 6.575162 ACGGTAGCAAAAAGATCAAATTCT 57.425 33.333 0.00 0.00 0.00 2.40
502 512 2.044492 ACTAGGGTCAAGGGTCAGATCA 59.956 50.000 0.00 0.00 0.00 2.92
513 523 6.100279 TCAAGGGTCAGATCATGCTAAAGTAT 59.900 38.462 0.00 0.00 0.00 2.12
514 524 5.862845 AGGGTCAGATCATGCTAAAGTATG 58.137 41.667 1.99 1.99 39.12 2.39
521 531 7.227314 TCAGATCATGCTAAAGTATGCGAAAAT 59.773 33.333 3.44 0.00 37.92 1.82
543 553 5.508200 TGGTCAAAACACGAAATTTAGCT 57.492 34.783 0.00 0.00 0.00 3.32
544 554 5.897050 TGGTCAAAACACGAAATTTAGCTT 58.103 33.333 0.00 0.00 0.00 3.74
545 555 6.334202 TGGTCAAAACACGAAATTTAGCTTT 58.666 32.000 0.00 0.00 0.00 3.51
556 566 5.405269 CGAAATTTAGCTTTTTGGAGTTGGG 59.595 40.000 0.00 0.00 0.00 4.12
575 585 1.960040 GCTAATGCCCAAACAGCCCC 61.960 60.000 0.00 0.00 0.00 5.80
603 613 0.904649 TGTCCACAGCTGTCCATAGG 59.095 55.000 18.64 15.20 0.00 2.57
712 731 2.197875 GGCTCCGCCCCTAGTAGA 59.802 66.667 0.00 0.00 44.06 2.59
761 781 3.450115 GTCGTCCCTCCCCGTGAG 61.450 72.222 0.00 0.00 41.07 3.51
845 870 0.829333 CTCACAGTCCCAGATCCCAG 59.171 60.000 0.00 0.00 0.00 4.45
866 891 2.000048 TCCAGCCCCACCTCTTAAAAT 59.000 47.619 0.00 0.00 0.00 1.82
907 932 1.453015 AGGAAAACACACAGGCGCA 60.453 52.632 10.83 0.00 0.00 6.09
908 933 1.008538 GGAAAACACACAGGCGCAG 60.009 57.895 10.83 3.04 0.00 5.18
1155 1184 3.823330 GACCTCGACATCGGCGGT 61.823 66.667 7.21 13.52 42.79 5.68
1523 1552 1.293924 CCACACTCCGATGCTCAATC 58.706 55.000 0.00 0.00 0.00 2.67
1654 1688 3.456380 AAGGGAAATGCCTTGAGCTTA 57.544 42.857 5.32 0.00 44.23 3.09
1697 1731 4.505922 CGGCTTAATTTGTTTCTTTGTGCA 59.494 37.500 0.00 0.00 0.00 4.57
1888 1922 4.670347 GGGTCTACGAACATCTTCAGTAC 58.330 47.826 0.00 0.00 0.00 2.73
1893 1928 7.431668 GGTCTACGAACATCTTCAGTACAATAC 59.568 40.741 0.00 0.00 0.00 1.89
1958 1993 4.732647 GCAGTGTGCTGATATGTGAATTGG 60.733 45.833 0.00 0.00 45.28 3.16
2241 2569 8.816640 ACATCACATTGACTAAAACCAATTTC 57.183 30.769 0.00 0.00 31.25 2.17
2317 2650 1.694150 TCTGGTGCAGCAGTTAGTCTT 59.306 47.619 37.07 0.00 0.00 3.01
2339 2672 7.955864 GTCTTTTCAATATTGTGGAGACGTTAC 59.044 37.037 20.76 8.53 0.00 2.50
2401 2734 9.386122 ACATTTAATATCTCCATCTCCACTACT 57.614 33.333 0.00 0.00 0.00 2.57
2449 2782 5.499313 TGTGGCAGAACATTGAATATCAGA 58.501 37.500 0.00 0.00 0.00 3.27
2635 2970 7.008021 AGCATTCCAAAAATGTAAATCACCT 57.992 32.000 0.30 0.00 0.00 4.00
2668 3004 4.837860 TGCCAAAACAAACATCTTATCCCT 59.162 37.500 0.00 0.00 0.00 4.20
2726 3062 1.003118 TCGACTTGATCCCCAAACCAG 59.997 52.381 0.00 0.00 33.76 4.00
3165 3501 8.464404 CATTTTCCATCTGTCTGTTGTATCATT 58.536 33.333 0.00 0.00 0.00 2.57
3225 3561 6.683974 GTGAGAACACTGTAATGGCAATAT 57.316 37.500 0.00 0.00 42.99 1.28
3306 3642 1.648504 GCAAATTGCATCTGGCTTCC 58.351 50.000 13.73 0.00 44.26 3.46
3396 3732 6.921914 ACCTCTGTACCATAATATAAGACGC 58.078 40.000 0.00 0.00 0.00 5.19
3583 3919 7.759489 TTTTATGCTGTTGACTATTGAAGGT 57.241 32.000 0.00 0.00 0.00 3.50
3935 4273 6.215845 GCTTCTAGTTTTTCCATTGCTTCAA 58.784 36.000 0.00 0.00 0.00 2.69
3938 4276 7.765695 TCTAGTTTTTCCATTGCTTCAATCT 57.234 32.000 0.00 0.00 31.05 2.40
4022 4360 6.546772 TGCAATATTCTGCCTGTGATTTATCA 59.453 34.615 0.00 0.00 41.90 2.15
4046 4384 0.325933 CTCTCTTGGCATGACACCCA 59.674 55.000 0.00 0.00 0.00 4.51
4205 4561 3.635099 TGCCTATGCAGTACTCCCT 57.365 52.632 0.00 0.00 44.23 4.20
4206 4562 1.414158 TGCCTATGCAGTACTCCCTC 58.586 55.000 0.00 0.00 44.23 4.30
4207 4563 0.682292 GCCTATGCAGTACTCCCTCC 59.318 60.000 0.00 0.00 37.47 4.30
4208 4564 0.962489 CCTATGCAGTACTCCCTCCG 59.038 60.000 0.00 0.00 0.00 4.63
4209 4565 1.693627 CTATGCAGTACTCCCTCCGT 58.306 55.000 0.00 0.00 0.00 4.69
4210 4566 1.609555 CTATGCAGTACTCCCTCCGTC 59.390 57.143 0.00 0.00 0.00 4.79
4211 4567 1.043673 ATGCAGTACTCCCTCCGTCC 61.044 60.000 0.00 0.00 0.00 4.79
4212 4568 2.772691 GCAGTACTCCCTCCGTCCG 61.773 68.421 0.00 0.00 0.00 4.79
4213 4569 2.119655 CAGTACTCCCTCCGTCCGG 61.120 68.421 0.00 0.00 0.00 5.14
4214 4570 2.273449 GTACTCCCTCCGTCCGGA 59.727 66.667 0.00 0.00 42.90 5.14
4215 4571 1.379044 GTACTCCCTCCGTCCGGAA 60.379 63.158 5.23 0.00 44.66 4.30
4216 4572 0.967380 GTACTCCCTCCGTCCGGAAA 60.967 60.000 5.23 0.00 44.66 3.13
4217 4573 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17
4218 4574 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.000 5.23 0.00 44.66 1.40
4219 4575 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.000 5.23 0.00 44.66 1.89
4220 4576 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12
4221 4577 0.828677 CCCTCCGTCCGGAAATACTT 59.171 55.000 5.23 0.00 44.66 2.24
4222 4578 1.472728 CCCTCCGTCCGGAAATACTTG 60.473 57.143 5.23 0.00 44.66 3.16
4223 4579 1.479323 CCTCCGTCCGGAAATACTTGA 59.521 52.381 5.23 0.00 44.66 3.02
4224 4580 2.537401 CTCCGTCCGGAAATACTTGAC 58.463 52.381 5.23 0.00 44.66 3.18
4225 4581 1.894466 TCCGTCCGGAAATACTTGACA 59.106 47.619 5.23 0.00 42.05 3.58
4226 4582 2.498481 TCCGTCCGGAAATACTTGACAT 59.502 45.455 5.23 0.00 42.05 3.06
4227 4583 2.864343 CCGTCCGGAAATACTTGACATC 59.136 50.000 5.23 0.00 37.50 3.06
4228 4584 3.517602 CGTCCGGAAATACTTGACATCA 58.482 45.455 5.23 0.00 0.00 3.07
4229 4585 3.930229 CGTCCGGAAATACTTGACATCAA 59.070 43.478 5.23 0.00 0.00 2.57
4230 4586 4.201685 CGTCCGGAAATACTTGACATCAAC 60.202 45.833 5.23 0.00 0.00 3.18
4231 4587 4.693566 GTCCGGAAATACTTGACATCAACA 59.306 41.667 5.23 0.00 0.00 3.33
4232 4588 5.354234 GTCCGGAAATACTTGACATCAACAT 59.646 40.000 5.23 0.00 0.00 2.71
4233 4589 5.353956 TCCGGAAATACTTGACATCAACATG 59.646 40.000 0.00 0.00 35.92 3.21
4234 4590 5.353956 CCGGAAATACTTGACATCAACATGA 59.646 40.000 0.00 0.00 33.72 3.07
4235 4591 6.128035 CCGGAAATACTTGACATCAACATGAA 60.128 38.462 0.00 0.00 33.72 2.57
4236 4592 7.415541 CCGGAAATACTTGACATCAACATGAAT 60.416 37.037 0.00 0.00 33.72 2.57
4237 4593 8.611757 CGGAAATACTTGACATCAACATGAATA 58.388 33.333 0.00 0.00 33.72 1.75
4243 4599 7.605449 ACTTGACATCAACATGAATAAAAGGG 58.395 34.615 0.00 0.00 33.72 3.95
4244 4600 6.528537 TGACATCAACATGAATAAAAGGGG 57.471 37.500 0.00 0.00 33.72 4.79
4245 4601 6.252233 TGACATCAACATGAATAAAAGGGGA 58.748 36.000 0.00 0.00 33.72 4.81
4246 4602 6.896860 TGACATCAACATGAATAAAAGGGGAT 59.103 34.615 0.00 0.00 33.72 3.85
4247 4603 7.116075 ACATCAACATGAATAAAAGGGGATG 57.884 36.000 0.00 0.00 35.70 3.51
4248 4604 6.669154 ACATCAACATGAATAAAAGGGGATGT 59.331 34.615 0.00 0.00 37.42 3.06
4249 4605 7.838696 ACATCAACATGAATAAAAGGGGATGTA 59.161 33.333 0.00 0.00 39.62 2.29
4250 4606 8.863086 CATCAACATGAATAAAAGGGGATGTAT 58.137 33.333 0.00 0.00 30.57 2.29
4251 4607 8.463930 TCAACATGAATAAAAGGGGATGTATC 57.536 34.615 0.00 0.00 0.00 2.24
4252 4608 8.281531 TCAACATGAATAAAAGGGGATGTATCT 58.718 33.333 0.00 0.00 0.00 1.98
4253 4609 9.573166 CAACATGAATAAAAGGGGATGTATCTA 57.427 33.333 0.00 0.00 0.00 1.98
4254 4610 9.799106 AACATGAATAAAAGGGGATGTATCTAG 57.201 33.333 0.00 0.00 0.00 2.43
4255 4611 9.170890 ACATGAATAAAAGGGGATGTATCTAGA 57.829 33.333 0.00 0.00 0.00 2.43
4258 4614 9.170890 TGAATAAAAGGGGATGTATCTAGATGT 57.829 33.333 15.79 1.25 0.00 3.06
4266 4622 9.845214 AGGGGATGTATCTAGATGTATTTTAGT 57.155 33.333 15.79 0.00 0.00 2.24
4290 4646 9.170890 AGTTCTAGATACATCCCATTTTATCCA 57.829 33.333 0.00 0.00 0.00 3.41
4291 4647 9.965902 GTTCTAGATACATCCCATTTTATCCAT 57.034 33.333 0.00 0.00 0.00 3.41
4296 4652 9.659135 AGATACATCCCATTTTATCCATTTTGA 57.341 29.630 0.00 0.00 0.00 2.69
4299 4655 8.321621 ACATCCCATTTTATCCATTTTGATGA 57.678 30.769 0.00 0.00 32.39 2.92
4300 4656 8.206189 ACATCCCATTTTATCCATTTTGATGAC 58.794 33.333 0.00 0.00 32.39 3.06
4301 4657 7.730672 TCCCATTTTATCCATTTTGATGACA 57.269 32.000 0.00 0.00 0.00 3.58
4302 4658 8.143673 TCCCATTTTATCCATTTTGATGACAA 57.856 30.769 0.00 0.00 0.00 3.18
4303 4659 8.259411 TCCCATTTTATCCATTTTGATGACAAG 58.741 33.333 0.00 0.00 37.32 3.16
4304 4660 8.042515 CCCATTTTATCCATTTTGATGACAAGT 58.957 33.333 0.00 0.00 37.32 3.16
4311 4667 8.915871 ATCCATTTTGATGACAAGTATTTTCG 57.084 30.769 0.00 0.00 37.32 3.46
4312 4668 7.312154 TCCATTTTGATGACAAGTATTTTCGG 58.688 34.615 0.00 0.00 37.32 4.30
4313 4669 7.175816 TCCATTTTGATGACAAGTATTTTCGGA 59.824 33.333 0.00 0.00 37.32 4.55
4314 4670 7.273381 CCATTTTGATGACAAGTATTTTCGGAC 59.727 37.037 0.00 0.00 37.32 4.79
4315 4671 5.524511 TTGATGACAAGTATTTTCGGACG 57.475 39.130 0.00 0.00 0.00 4.79
4316 4672 3.930229 TGATGACAAGTATTTTCGGACGG 59.070 43.478 0.00 0.00 0.00 4.79
4317 4673 3.663995 TGACAAGTATTTTCGGACGGA 57.336 42.857 0.00 0.00 0.00 4.69
4318 4674 3.581755 TGACAAGTATTTTCGGACGGAG 58.418 45.455 0.00 0.00 0.00 4.63
4319 4675 2.928116 GACAAGTATTTTCGGACGGAGG 59.072 50.000 0.00 0.00 0.00 4.30
4320 4676 2.277084 CAAGTATTTTCGGACGGAGGG 58.723 52.381 0.00 0.00 0.00 4.30
4542 4898 3.272042 CCACCCCCATTCCACCCA 61.272 66.667 0.00 0.00 0.00 4.51
4720 5076 4.494091 AGCAGCAGTACATTCTAACCAT 57.506 40.909 0.00 0.00 0.00 3.55
4815 5173 5.705905 GCTGTTTCTGGTCCTGTAAACTTAT 59.294 40.000 16.87 0.00 33.89 1.73
4885 5243 5.588246 TCAGTTGCTGATTTTTGTAGACACA 59.412 36.000 0.00 0.00 35.39 3.72
4941 5299 2.348362 TCATTTTCTGCGTGCGTGATAG 59.652 45.455 0.00 0.00 0.00 2.08
5205 6529 7.676807 GCAGTGAAGATAGAATTGCTTTCTCAG 60.677 40.741 5.86 0.00 43.75 3.35
5206 6530 7.548427 CAGTGAAGATAGAATTGCTTTCTCAGA 59.452 37.037 5.86 0.00 43.75 3.27
5207 6531 8.266473 AGTGAAGATAGAATTGCTTTCTCAGAT 58.734 33.333 5.86 0.00 43.75 2.90
5208 6532 8.336806 GTGAAGATAGAATTGCTTTCTCAGATG 58.663 37.037 5.86 0.00 43.75 2.90
5209 6533 8.045507 TGAAGATAGAATTGCTTTCTCAGATGT 58.954 33.333 5.86 0.00 43.75 3.06
5210 6534 9.539825 GAAGATAGAATTGCTTTCTCAGATGTA 57.460 33.333 5.86 0.00 43.75 2.29
5211 6535 8.885494 AGATAGAATTGCTTTCTCAGATGTAC 57.115 34.615 5.86 0.00 43.75 2.90
5212 6536 8.481314 AGATAGAATTGCTTTCTCAGATGTACA 58.519 33.333 0.00 0.00 43.75 2.90
5213 6537 9.270640 GATAGAATTGCTTTCTCAGATGTACAT 57.729 33.333 8.43 8.43 43.75 2.29
5229 6553 9.670719 CAGATGTACATATATATAGACCAAGCG 57.329 37.037 8.71 0.00 0.00 4.68
5296 6621 4.104831 ACATATATAGGAGGGGGTTGCTC 58.895 47.826 0.54 0.00 0.00 4.26
5312 6637 1.113788 GCTCATGCCCAAATTAGCCA 58.886 50.000 0.00 0.00 0.00 4.75
5313 6638 1.481772 GCTCATGCCCAAATTAGCCAA 59.518 47.619 0.00 0.00 0.00 4.52
5314 6639 2.103601 GCTCATGCCCAAATTAGCCAAT 59.896 45.455 0.00 0.00 0.00 3.16
5315 6640 3.321682 GCTCATGCCCAAATTAGCCAATA 59.678 43.478 0.00 0.00 0.00 1.90
5316 6641 4.797275 GCTCATGCCCAAATTAGCCAATAC 60.797 45.833 0.00 0.00 0.00 1.89
5357 6682 9.368416 AGTGGATGACTATACAAGTATACACAT 57.632 33.333 5.50 12.47 39.07 3.21
5471 6802 0.893727 TGTGACGGCTAGCTGACTCA 60.894 55.000 30.16 25.12 0.00 3.41
5472 6803 0.456995 GTGACGGCTAGCTGACTCAC 60.457 60.000 30.16 26.40 0.00 3.51
5473 6804 1.139947 GACGGCTAGCTGACTCACC 59.860 63.158 30.16 7.64 0.00 4.02
5474 6805 1.595993 GACGGCTAGCTGACTCACCA 61.596 60.000 30.16 0.00 0.00 4.17
5475 6806 1.185618 ACGGCTAGCTGACTCACCAA 61.186 55.000 30.16 0.00 0.00 3.67
5476 6807 0.037326 CGGCTAGCTGACTCACCAAA 60.037 55.000 19.34 0.00 0.00 3.28
5477 6808 1.406069 CGGCTAGCTGACTCACCAAAT 60.406 52.381 19.34 0.00 0.00 2.32
5478 6809 2.716217 GGCTAGCTGACTCACCAAATT 58.284 47.619 15.72 0.00 0.00 1.82
5479 6810 3.678806 CGGCTAGCTGACTCACCAAATTA 60.679 47.826 19.34 0.00 0.00 1.40
5480 6811 3.873952 GGCTAGCTGACTCACCAAATTAG 59.126 47.826 15.72 0.00 0.00 1.73
5481 6812 4.508662 GCTAGCTGACTCACCAAATTAGT 58.491 43.478 7.70 0.00 0.00 2.24
5482 6813 4.331168 GCTAGCTGACTCACCAAATTAGTG 59.669 45.833 7.70 2.78 36.54 2.74
5483 6814 4.623932 AGCTGACTCACCAAATTAGTGA 57.376 40.909 10.02 10.02 41.84 3.41
5484 6815 4.319177 AGCTGACTCACCAAATTAGTGAC 58.681 43.478 7.05 1.25 39.29 3.67
5485 6816 4.065088 GCTGACTCACCAAATTAGTGACA 58.935 43.478 7.05 4.99 39.29 3.58
5486 6817 4.515191 GCTGACTCACCAAATTAGTGACAA 59.485 41.667 7.05 0.00 39.29 3.18
5487 6818 5.182001 GCTGACTCACCAAATTAGTGACAAT 59.818 40.000 7.05 0.00 39.29 2.71
5488 6819 6.371548 GCTGACTCACCAAATTAGTGACAATA 59.628 38.462 7.05 0.00 39.29 1.90
5489 6820 7.094805 GCTGACTCACCAAATTAGTGACAATAA 60.095 37.037 7.05 0.00 39.29 1.40
5490 6821 8.684386 TGACTCACCAAATTAGTGACAATAAA 57.316 30.769 7.05 0.00 39.29 1.40
5491 6822 8.564574 TGACTCACCAAATTAGTGACAATAAAC 58.435 33.333 7.05 0.00 39.29 2.01
5492 6823 7.882179 ACTCACCAAATTAGTGACAATAAACC 58.118 34.615 7.05 0.00 39.29 3.27
5493 6824 7.724061 ACTCACCAAATTAGTGACAATAAACCT 59.276 33.333 7.05 0.00 39.29 3.50
5494 6825 8.472007 TCACCAAATTAGTGACAATAAACCTT 57.528 30.769 7.05 0.00 39.29 3.50
5495 6826 8.573035 TCACCAAATTAGTGACAATAAACCTTC 58.427 33.333 7.05 0.00 39.29 3.46
5496 6827 8.576442 CACCAAATTAGTGACAATAAACCTTCT 58.424 33.333 0.00 0.00 37.42 2.85
5497 6828 9.143155 ACCAAATTAGTGACAATAAACCTTCTT 57.857 29.630 0.00 0.00 0.00 2.52
5498 6829 9.410556 CCAAATTAGTGACAATAAACCTTCTTG 57.589 33.333 0.00 0.00 0.00 3.02
5499 6830 9.410556 CAAATTAGTGACAATAAACCTTCTTGG 57.589 33.333 0.00 0.00 42.93 3.61
5500 6831 6.569179 TTAGTGACAATAAACCTTCTTGGC 57.431 37.500 0.00 0.00 40.22 4.52
5501 6832 4.729868 AGTGACAATAAACCTTCTTGGCT 58.270 39.130 0.00 0.00 40.22 4.75
5502 6833 5.140454 AGTGACAATAAACCTTCTTGGCTT 58.860 37.500 0.00 0.00 40.22 4.35
5503 6834 5.598417 AGTGACAATAAACCTTCTTGGCTTT 59.402 36.000 0.00 0.00 40.22 3.51
5504 6835 5.691754 GTGACAATAAACCTTCTTGGCTTTG 59.308 40.000 0.00 0.00 40.22 2.77
5505 6836 5.213891 ACAATAAACCTTCTTGGCTTTGG 57.786 39.130 0.00 0.00 40.22 3.28
5506 6837 4.898861 ACAATAAACCTTCTTGGCTTTGGA 59.101 37.500 0.00 0.00 40.22 3.53
5507 6838 5.543790 ACAATAAACCTTCTTGGCTTTGGAT 59.456 36.000 0.00 0.00 40.22 3.41
5508 6839 5.665916 ATAAACCTTCTTGGCTTTGGATG 57.334 39.130 0.00 0.00 40.22 3.51
5509 6840 1.260544 ACCTTCTTGGCTTTGGATGC 58.739 50.000 0.00 0.00 40.22 3.91
5510 6841 0.171903 CCTTCTTGGCTTTGGATGCG 59.828 55.000 0.00 0.00 0.00 4.73
5511 6842 0.171903 CTTCTTGGCTTTGGATGCGG 59.828 55.000 0.00 0.00 0.00 5.69
5512 6843 1.250154 TTCTTGGCTTTGGATGCGGG 61.250 55.000 0.00 0.00 0.00 6.13
5513 6844 1.678635 CTTGGCTTTGGATGCGGGA 60.679 57.895 0.00 0.00 0.00 5.14
5514 6845 1.660560 CTTGGCTTTGGATGCGGGAG 61.661 60.000 0.00 0.00 0.00 4.30
5515 6846 2.044946 GGCTTTGGATGCGGGAGT 60.045 61.111 0.00 0.00 0.00 3.85
5516 6847 1.678970 GGCTTTGGATGCGGGAGTT 60.679 57.895 0.00 0.00 0.00 3.01
5517 6848 1.250840 GGCTTTGGATGCGGGAGTTT 61.251 55.000 0.00 0.00 0.00 2.66
5518 6849 0.109132 GCTTTGGATGCGGGAGTTTG 60.109 55.000 0.00 0.00 0.00 2.93
5519 6850 1.533625 CTTTGGATGCGGGAGTTTGA 58.466 50.000 0.00 0.00 0.00 2.69
5520 6851 1.470098 CTTTGGATGCGGGAGTTTGAG 59.530 52.381 0.00 0.00 0.00 3.02
5521 6852 0.690192 TTGGATGCGGGAGTTTGAGA 59.310 50.000 0.00 0.00 0.00 3.27
5522 6853 0.911769 TGGATGCGGGAGTTTGAGAT 59.088 50.000 0.00 0.00 0.00 2.75
5523 6854 1.303309 GGATGCGGGAGTTTGAGATG 58.697 55.000 0.00 0.00 0.00 2.90
5524 6855 1.134401 GGATGCGGGAGTTTGAGATGA 60.134 52.381 0.00 0.00 0.00 2.92
5525 6856 2.208431 GATGCGGGAGTTTGAGATGAG 58.792 52.381 0.00 0.00 0.00 2.90
5526 6857 0.250234 TGCGGGAGTTTGAGATGAGG 59.750 55.000 0.00 0.00 0.00 3.86
5527 6858 0.250513 GCGGGAGTTTGAGATGAGGT 59.749 55.000 0.00 0.00 0.00 3.85
5528 6859 2.009042 GCGGGAGTTTGAGATGAGGTG 61.009 57.143 0.00 0.00 0.00 4.00
5529 6860 1.406069 CGGGAGTTTGAGATGAGGTGG 60.406 57.143 0.00 0.00 0.00 4.61
5530 6861 1.630878 GGGAGTTTGAGATGAGGTGGT 59.369 52.381 0.00 0.00 0.00 4.16
5531 6862 2.838202 GGGAGTTTGAGATGAGGTGGTA 59.162 50.000 0.00 0.00 0.00 3.25
5532 6863 3.118592 GGGAGTTTGAGATGAGGTGGTAG 60.119 52.174 0.00 0.00 0.00 3.18
5533 6864 3.118592 GGAGTTTGAGATGAGGTGGTAGG 60.119 52.174 0.00 0.00 0.00 3.18
5534 6865 2.840651 AGTTTGAGATGAGGTGGTAGGG 59.159 50.000 0.00 0.00 0.00 3.53
5535 6866 1.204146 TTGAGATGAGGTGGTAGGGC 58.796 55.000 0.00 0.00 0.00 5.19
5536 6867 0.042581 TGAGATGAGGTGGTAGGGCA 59.957 55.000 0.00 0.00 0.00 5.36
5537 6868 1.344393 TGAGATGAGGTGGTAGGGCAT 60.344 52.381 0.00 0.00 0.00 4.40
5538 6869 1.346068 GAGATGAGGTGGTAGGGCATC 59.654 57.143 0.00 0.00 36.49 3.91
5539 6870 1.061812 AGATGAGGTGGTAGGGCATCT 60.062 52.381 0.00 0.00 40.43 2.90
5540 6871 1.346068 GATGAGGTGGTAGGGCATCTC 59.654 57.143 0.00 0.00 34.15 2.75
5541 6872 0.691078 TGAGGTGGTAGGGCATCTCC 60.691 60.000 0.00 0.00 0.00 3.71
5542 6873 0.691078 GAGGTGGTAGGGCATCTCCA 60.691 60.000 0.00 0.00 36.21 3.86
5543 6874 0.253160 AGGTGGTAGGGCATCTCCAA 60.253 55.000 0.00 0.00 36.21 3.53
5544 6875 0.107165 GGTGGTAGGGCATCTCCAAC 60.107 60.000 0.00 0.00 36.21 3.77
5545 6876 0.462047 GTGGTAGGGCATCTCCAACG 60.462 60.000 0.00 0.00 36.21 4.10
5546 6877 1.523938 GGTAGGGCATCTCCAACGC 60.524 63.158 0.00 0.00 36.21 4.84
5547 6878 1.883084 GTAGGGCATCTCCAACGCG 60.883 63.158 3.53 3.53 36.21 6.01
5548 6879 3.733344 TAGGGCATCTCCAACGCGC 62.733 63.158 5.73 0.00 38.75 6.86
5550 6881 4.166011 GGCATCTCCAACGCGCAC 62.166 66.667 5.73 0.00 34.01 5.34
5552 6883 2.809174 CATCTCCAACGCGCACGA 60.809 61.111 5.73 0.00 43.93 4.35
5553 6884 2.048597 ATCTCCAACGCGCACGAA 60.049 55.556 5.73 0.00 43.93 3.85
5554 6885 2.094659 ATCTCCAACGCGCACGAAG 61.095 57.895 5.73 0.00 43.93 3.79
5556 6887 3.000080 CTCCAACGCGCACGAAGTC 62.000 63.158 5.73 0.00 41.61 3.01
5557 6888 4.409588 CCAACGCGCACGAAGTCG 62.410 66.667 5.73 0.00 41.61 4.18
5563 6894 2.733218 CGCACGAAGTCGCTTCCA 60.733 61.111 12.09 0.00 41.61 3.53
5564 6895 2.307309 CGCACGAAGTCGCTTCCAA 61.307 57.895 12.09 0.00 41.61 3.53
5565 6896 1.827315 CGCACGAAGTCGCTTCCAAA 61.827 55.000 12.09 0.00 41.61 3.28
5566 6897 0.306533 GCACGAAGTCGCTTCCAAAA 59.693 50.000 12.09 0.00 41.61 2.44
5567 6898 1.069227 GCACGAAGTCGCTTCCAAAAT 60.069 47.619 12.09 0.00 41.61 1.82
5568 6899 2.574322 CACGAAGTCGCTTCCAAAATG 58.426 47.619 12.09 2.72 41.61 2.32
5569 6900 2.032030 CACGAAGTCGCTTCCAAAATGT 60.032 45.455 12.09 3.20 41.61 2.71
5570 6901 2.223377 ACGAAGTCGCTTCCAAAATGTC 59.777 45.455 12.09 0.00 44.43 3.06
5571 6902 2.480419 CGAAGTCGCTTCCAAAATGTCT 59.520 45.455 12.09 0.00 37.20 3.41
5572 6903 3.665323 CGAAGTCGCTTCCAAAATGTCTG 60.665 47.826 12.09 0.00 37.20 3.51
5573 6904 2.154462 AGTCGCTTCCAAAATGTCTGG 58.846 47.619 0.00 0.00 35.05 3.86
5574 6905 2.151202 GTCGCTTCCAAAATGTCTGGA 58.849 47.619 0.00 0.00 41.33 3.86
5575 6906 2.095718 GTCGCTTCCAAAATGTCTGGAC 60.096 50.000 0.00 0.00 42.76 4.02
5576 6907 2.154462 CGCTTCCAAAATGTCTGGACT 58.846 47.619 2.38 0.00 42.76 3.85
5577 6908 2.095567 CGCTTCCAAAATGTCTGGACTG 60.096 50.000 2.38 0.00 42.76 3.51
5578 6909 2.229784 GCTTCCAAAATGTCTGGACTGG 59.770 50.000 2.38 2.03 42.76 4.00
5579 6910 3.754965 CTTCCAAAATGTCTGGACTGGA 58.245 45.455 5.65 5.65 42.76 3.86
5580 6911 4.338879 CTTCCAAAATGTCTGGACTGGAT 58.661 43.478 9.27 0.00 42.76 3.41
5581 6912 3.689347 TCCAAAATGTCTGGACTGGATG 58.311 45.455 5.65 0.17 38.07 3.51
5582 6913 2.756760 CCAAAATGTCTGGACTGGATGG 59.243 50.000 2.38 2.98 35.85 3.51
5583 6914 3.424703 CAAAATGTCTGGACTGGATGGT 58.575 45.455 2.38 0.00 0.00 3.55
5584 6915 3.814504 AAATGTCTGGACTGGATGGTT 57.185 42.857 2.38 0.00 0.00 3.67
5585 6916 3.356529 AATGTCTGGACTGGATGGTTC 57.643 47.619 2.38 0.00 0.00 3.62
5586 6917 1.728323 TGTCTGGACTGGATGGTTCA 58.272 50.000 2.38 0.00 0.00 3.18
5587 6918 1.347707 TGTCTGGACTGGATGGTTCAC 59.652 52.381 2.38 0.00 0.00 3.18
5588 6919 1.347707 GTCTGGACTGGATGGTTCACA 59.652 52.381 0.00 0.00 0.00 3.58
5589 6920 1.347707 TCTGGACTGGATGGTTCACAC 59.652 52.381 0.00 0.00 0.00 3.82
5590 6921 1.072173 CTGGACTGGATGGTTCACACA 59.928 52.381 0.00 0.00 0.00 3.72
5591 6922 1.704628 TGGACTGGATGGTTCACACAT 59.295 47.619 0.00 0.00 0.00 3.21
5592 6923 2.108075 TGGACTGGATGGTTCACACATT 59.892 45.455 0.00 0.00 0.00 2.71
5593 6924 3.157087 GGACTGGATGGTTCACACATTT 58.843 45.455 0.00 0.00 0.00 2.32
5594 6925 3.573967 GGACTGGATGGTTCACACATTTT 59.426 43.478 0.00 0.00 0.00 1.82
5595 6926 4.039124 GGACTGGATGGTTCACACATTTTT 59.961 41.667 0.00 0.00 0.00 1.94
5596 6927 5.242838 GGACTGGATGGTTCACACATTTTTA 59.757 40.000 0.00 0.00 0.00 1.52
5597 6928 6.331369 ACTGGATGGTTCACACATTTTTAG 57.669 37.500 0.00 0.00 0.00 1.85
5598 6929 5.243730 ACTGGATGGTTCACACATTTTTAGG 59.756 40.000 0.00 0.00 0.00 2.69
5599 6930 5.144100 TGGATGGTTCACACATTTTTAGGT 58.856 37.500 0.00 0.00 0.00 3.08
5600 6931 5.242838 TGGATGGTTCACACATTTTTAGGTC 59.757 40.000 0.00 0.00 0.00 3.85
5601 6932 5.476945 GGATGGTTCACACATTTTTAGGTCT 59.523 40.000 0.00 0.00 0.00 3.85
5602 6933 6.349363 GGATGGTTCACACATTTTTAGGTCTC 60.349 42.308 0.00 0.00 0.00 3.36
5603 6934 4.825085 TGGTTCACACATTTTTAGGTCTCC 59.175 41.667 0.00 0.00 0.00 3.71
5604 6935 4.825085 GGTTCACACATTTTTAGGTCTCCA 59.175 41.667 0.00 0.00 0.00 3.86
5605 6936 5.300792 GGTTCACACATTTTTAGGTCTCCAA 59.699 40.000 0.00 0.00 0.00 3.53
5606 6937 6.206498 GTTCACACATTTTTAGGTCTCCAAC 58.794 40.000 0.00 0.00 0.00 3.77
5607 6938 4.513692 TCACACATTTTTAGGTCTCCAACG 59.486 41.667 0.00 0.00 0.00 4.10
5608 6939 4.274950 CACACATTTTTAGGTCTCCAACGT 59.725 41.667 0.00 0.00 0.00 3.99
5609 6940 4.274950 ACACATTTTTAGGTCTCCAACGTG 59.725 41.667 0.00 0.00 0.00 4.49
5610 6941 3.818773 ACATTTTTAGGTCTCCAACGTGG 59.181 43.478 0.00 0.00 39.43 4.94
5611 6942 3.564053 TTTTTAGGTCTCCAACGTGGT 57.436 42.857 0.00 0.00 39.03 4.16
5612 6943 2.825861 TTTAGGTCTCCAACGTGGTC 57.174 50.000 0.00 0.00 39.03 4.02
5613 6944 0.599558 TTAGGTCTCCAACGTGGTCG 59.400 55.000 0.00 0.00 39.03 4.79
5623 6954 3.561429 CGTGGTCGTCCATGTTGG 58.439 61.111 12.18 0.00 46.20 3.77
5624 6955 2.032634 CGTGGTCGTCCATGTTGGG 61.033 63.158 12.18 0.00 46.20 4.12
5625 6956 2.033448 TGGTCGTCCATGTTGGGC 59.967 61.111 0.00 0.00 39.19 5.36
5626 6957 2.351276 GGTCGTCCATGTTGGGCT 59.649 61.111 0.00 0.00 40.79 5.19
5627 6958 2.040544 GGTCGTCCATGTTGGGCTG 61.041 63.158 0.00 0.00 40.79 4.85
5628 6959 1.302511 GTCGTCCATGTTGGGCTGT 60.303 57.895 0.00 0.00 40.79 4.40
5629 6960 0.036765 GTCGTCCATGTTGGGCTGTA 60.037 55.000 0.00 0.00 40.79 2.74
5630 6961 0.036765 TCGTCCATGTTGGGCTGTAC 60.037 55.000 0.00 0.00 40.79 2.90
5631 6962 1.024579 CGTCCATGTTGGGCTGTACC 61.025 60.000 0.00 0.00 40.79 3.34
5632 6963 1.024579 GTCCATGTTGGGCTGTACCG 61.025 60.000 0.00 0.00 39.55 4.02
5633 6964 1.002624 CCATGTTGGGCTGTACCGT 60.003 57.895 0.00 0.00 40.62 4.83
5634 6965 1.024579 CCATGTTGGGCTGTACCGTC 61.025 60.000 0.00 0.00 40.62 4.79
5635 6966 0.036388 CATGTTGGGCTGTACCGTCT 60.036 55.000 0.00 0.00 40.62 4.18
5636 6967 1.206132 CATGTTGGGCTGTACCGTCTA 59.794 52.381 0.00 0.00 40.62 2.59
5637 6968 0.892755 TGTTGGGCTGTACCGTCTAG 59.107 55.000 0.00 0.00 40.62 2.43
5638 6969 1.180029 GTTGGGCTGTACCGTCTAGA 58.820 55.000 0.00 0.00 40.62 2.43
5639 6970 1.135170 GTTGGGCTGTACCGTCTAGAC 60.135 57.143 13.18 13.18 40.62 2.59
5652 6983 2.552031 GTCTAGACGCTCAAAATCCCC 58.448 52.381 7.22 0.00 0.00 4.81
5653 6984 2.093658 GTCTAGACGCTCAAAATCCCCA 60.094 50.000 7.22 0.00 0.00 4.96
5654 6985 2.093658 TCTAGACGCTCAAAATCCCCAC 60.094 50.000 0.00 0.00 0.00 4.61
5655 6986 0.673644 AGACGCTCAAAATCCCCACG 60.674 55.000 0.00 0.00 0.00 4.94
5656 6987 0.953960 GACGCTCAAAATCCCCACGT 60.954 55.000 0.00 0.00 34.58 4.49
5657 6988 0.953960 ACGCTCAAAATCCCCACGTC 60.954 55.000 0.00 0.00 0.00 4.34
5658 6989 1.794222 GCTCAAAATCCCCACGTCG 59.206 57.895 0.00 0.00 0.00 5.12
5659 6990 1.644786 GCTCAAAATCCCCACGTCGG 61.645 60.000 0.00 0.00 0.00 4.79
5660 6991 1.644786 CTCAAAATCCCCACGTCGGC 61.645 60.000 0.00 0.00 0.00 5.54
5661 6992 2.360726 AAAATCCCCACGTCGGCC 60.361 61.111 0.00 0.00 0.00 6.13
5662 6993 2.902457 AAAATCCCCACGTCGGCCT 61.902 57.895 0.00 0.00 0.00 5.19
5663 6994 1.555477 AAAATCCCCACGTCGGCCTA 61.555 55.000 0.00 0.00 0.00 3.93
5664 6995 1.555477 AAATCCCCACGTCGGCCTAA 61.555 55.000 0.00 0.00 0.00 2.69
5665 6996 1.555477 AATCCCCACGTCGGCCTAAA 61.555 55.000 0.00 0.00 0.00 1.85
5666 6997 1.342672 ATCCCCACGTCGGCCTAAAT 61.343 55.000 0.00 0.00 0.00 1.40
5667 6998 1.523032 CCCCACGTCGGCCTAAATC 60.523 63.158 0.00 0.00 0.00 2.17
5668 6999 1.881252 CCCACGTCGGCCTAAATCG 60.881 63.158 0.00 0.62 0.00 3.34
5669 7000 1.153706 CCACGTCGGCCTAAATCGT 60.154 57.895 0.00 1.30 35.12 3.73
5670 7001 1.995991 CACGTCGGCCTAAATCGTG 59.004 57.895 15.89 15.89 43.77 4.35
5671 7002 1.153706 ACGTCGGCCTAAATCGTGG 60.154 57.895 0.00 0.00 33.55 4.94
5672 7003 1.881252 CGTCGGCCTAAATCGTGGG 60.881 63.158 0.00 0.00 0.00 4.61
5673 7004 1.523032 GTCGGCCTAAATCGTGGGG 60.523 63.158 0.00 0.00 0.00 4.96
5674 7005 1.991167 TCGGCCTAAATCGTGGGGT 60.991 57.895 0.00 0.00 0.00 4.95
5675 7006 1.817941 CGGCCTAAATCGTGGGGTG 60.818 63.158 0.00 0.00 0.00 4.61
5676 7007 1.453197 GGCCTAAATCGTGGGGTGG 60.453 63.158 0.00 0.00 0.00 4.61
5677 7008 1.301954 GCCTAAATCGTGGGGTGGT 59.698 57.895 0.00 0.00 0.00 4.16
5678 7009 0.542805 GCCTAAATCGTGGGGTGGTA 59.457 55.000 0.00 0.00 0.00 3.25
5679 7010 1.142262 GCCTAAATCGTGGGGTGGTAT 59.858 52.381 0.00 0.00 0.00 2.73
5680 7011 2.369532 GCCTAAATCGTGGGGTGGTATA 59.630 50.000 0.00 0.00 0.00 1.47
5681 7012 3.556423 GCCTAAATCGTGGGGTGGTATAG 60.556 52.174 0.00 0.00 0.00 1.31
5682 7013 2.632987 AAATCGTGGGGTGGTATAGC 57.367 50.000 0.00 0.00 0.00 2.97
5683 7014 0.763035 AATCGTGGGGTGGTATAGCC 59.237 55.000 0.00 0.00 46.47 3.93
5688 7019 4.093196 GGGTGGTATAGCCCCCAA 57.907 61.111 16.69 0.00 43.34 4.12
5689 7020 1.844130 GGGTGGTATAGCCCCCAAG 59.156 63.158 16.69 0.00 43.34 3.61
5690 7021 0.696485 GGGTGGTATAGCCCCCAAGA 60.696 60.000 16.69 0.00 43.34 3.02
5691 7022 1.446016 GGTGGTATAGCCCCCAAGAT 58.554 55.000 0.00 0.00 36.04 2.40
5692 7023 1.073923 GGTGGTATAGCCCCCAAGATG 59.926 57.143 0.00 0.00 36.04 2.90
5693 7024 0.771127 TGGTATAGCCCCCAAGATGC 59.229 55.000 0.00 0.00 36.04 3.91
5694 7025 0.321653 GGTATAGCCCCCAAGATGCG 60.322 60.000 0.00 0.00 0.00 4.73
5695 7026 0.685097 GTATAGCCCCCAAGATGCGA 59.315 55.000 0.00 0.00 0.00 5.10
5696 7027 1.279271 GTATAGCCCCCAAGATGCGAT 59.721 52.381 0.00 0.00 0.00 4.58
5697 7028 0.773644 ATAGCCCCCAAGATGCGATT 59.226 50.000 0.00 0.00 0.00 3.34
5698 7029 0.108585 TAGCCCCCAAGATGCGATTC 59.891 55.000 0.00 0.00 0.00 2.52
5699 7030 1.152881 GCCCCCAAGATGCGATTCT 60.153 57.895 0.00 0.00 0.00 2.40
5700 7031 0.108585 GCCCCCAAGATGCGATTCTA 59.891 55.000 0.00 0.00 0.00 2.10
5701 7032 1.271597 GCCCCCAAGATGCGATTCTAT 60.272 52.381 0.00 0.00 0.00 1.98
5702 7033 2.704572 CCCCCAAGATGCGATTCTATC 58.295 52.381 0.00 0.00 0.00 2.08
5703 7034 2.616510 CCCCCAAGATGCGATTCTATCC 60.617 54.545 0.00 0.00 0.00 2.59
5704 7035 2.304180 CCCCAAGATGCGATTCTATCCT 59.696 50.000 0.00 0.00 0.00 3.24
5705 7036 3.515502 CCCCAAGATGCGATTCTATCCTA 59.484 47.826 0.00 0.00 0.00 2.94
5706 7037 4.020218 CCCCAAGATGCGATTCTATCCTAA 60.020 45.833 0.00 0.00 0.00 2.69
5707 7038 5.338708 CCCCAAGATGCGATTCTATCCTAAT 60.339 44.000 0.00 0.00 0.00 1.73
5708 7039 5.814705 CCCAAGATGCGATTCTATCCTAATC 59.185 44.000 0.00 0.00 0.00 1.75
5709 7040 6.401394 CCAAGATGCGATTCTATCCTAATCA 58.599 40.000 0.00 0.00 33.75 2.57
5710 7041 6.312426 CCAAGATGCGATTCTATCCTAATCAC 59.688 42.308 0.00 0.00 33.75 3.06
5711 7042 5.645624 AGATGCGATTCTATCCTAATCACG 58.354 41.667 0.00 0.00 33.75 4.35
5712 7043 4.848562 TGCGATTCTATCCTAATCACGT 57.151 40.909 0.00 0.00 33.75 4.49
5713 7044 4.546570 TGCGATTCTATCCTAATCACGTG 58.453 43.478 9.94 9.94 33.75 4.49
5714 7045 4.277423 TGCGATTCTATCCTAATCACGTGA 59.723 41.667 22.48 22.48 33.75 4.35
5715 7046 5.048013 TGCGATTCTATCCTAATCACGTGAT 60.048 40.000 25.18 25.18 33.75 3.06
5716 7047 5.287274 GCGATTCTATCCTAATCACGTGATG 59.713 44.000 30.57 18.85 33.75 3.07
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
61 64 0.039618 TCACTCCCCTTCATTTGGCC 59.960 55.000 0.00 0.00 0.00 5.36
62 65 1.467920 CTCACTCCCCTTCATTTGGC 58.532 55.000 0.00 0.00 0.00 4.52
154 159 1.622811 CTCTTCTCCTCACACAAGGCT 59.377 52.381 0.00 0.00 36.29 4.58
181 187 0.177604 CTTCCGAGCTCAAGGCATCT 59.822 55.000 15.40 0.00 44.79 2.90
182 188 0.176680 TCTTCCGAGCTCAAGGCATC 59.823 55.000 15.40 0.00 44.79 3.91
183 189 0.177604 CTCTTCCGAGCTCAAGGCAT 59.822 55.000 15.40 0.00 44.79 4.40
184 190 1.188219 ACTCTTCCGAGCTCAAGGCA 61.188 55.000 15.40 0.00 44.79 4.75
185 191 0.739112 CACTCTTCCGAGCTCAAGGC 60.739 60.000 15.40 0.00 41.09 4.35
186 192 0.891373 TCACTCTTCCGAGCTCAAGG 59.109 55.000 15.40 7.98 41.09 3.61
197 203 3.944015 CACATTCCCCATTCTCACTCTTC 59.056 47.826 0.00 0.00 0.00 2.87
218 224 2.850290 CACCCACCCATTCACCCA 59.150 61.111 0.00 0.00 0.00 4.51
244 250 3.508786 TTGTGAGGGGTGGGGGCTA 62.509 63.158 0.00 0.00 0.00 3.93
307 313 1.510776 CTCTACGGCGGTAGGACTAG 58.489 60.000 25.82 14.91 45.10 2.57
308 314 0.107456 CCTCTACGGCGGTAGGACTA 59.893 60.000 25.82 10.12 45.10 2.59
309 315 1.153005 CCTCTACGGCGGTAGGACT 60.153 63.158 25.82 0.00 45.10 3.85
310 316 2.192187 CCCTCTACGGCGGTAGGAC 61.192 68.421 25.82 0.00 45.10 3.85
322 328 0.749454 GAACCTACCGTCGCCCTCTA 60.749 60.000 0.00 0.00 0.00 2.43
323 329 2.036890 AACCTACCGTCGCCCTCT 59.963 61.111 0.00 0.00 0.00 3.69
325 331 3.073101 GGAACCTACCGTCGCCCT 61.073 66.667 0.00 0.00 0.00 5.19
326 332 2.176314 AAAGGAACCTACCGTCGCCC 62.176 60.000 0.00 0.00 34.73 6.13
368 376 1.980052 CCCTAGACAGCCGTTTGGA 59.020 57.895 0.00 0.00 37.49 3.53
378 386 2.056223 GCGGTAGGTGCCCTAGACA 61.056 63.158 1.56 0.00 36.71 3.41
444 453 6.206634 TCAGAATTTGATCTTTTTGCTACCGT 59.793 34.615 0.00 0.00 0.00 4.83
481 491 2.044492 TGATCTGACCCTTGACCCTAGT 59.956 50.000 0.00 0.00 0.00 2.57
482 492 2.752030 TGATCTGACCCTTGACCCTAG 58.248 52.381 0.00 0.00 0.00 3.02
483 493 2.940514 TGATCTGACCCTTGACCCTA 57.059 50.000 0.00 0.00 0.00 3.53
484 494 1.842562 CATGATCTGACCCTTGACCCT 59.157 52.381 0.00 0.00 0.00 4.34
485 495 1.748591 GCATGATCTGACCCTTGACCC 60.749 57.143 0.00 0.00 0.00 4.46
486 496 1.211457 AGCATGATCTGACCCTTGACC 59.789 52.381 0.00 0.00 0.00 4.02
487 497 2.706339 AGCATGATCTGACCCTTGAC 57.294 50.000 0.00 0.00 0.00 3.18
488 498 4.225942 ACTTTAGCATGATCTGACCCTTGA 59.774 41.667 0.00 0.00 0.00 3.02
489 499 4.521146 ACTTTAGCATGATCTGACCCTTG 58.479 43.478 0.00 0.00 0.00 3.61
490 500 4.851639 ACTTTAGCATGATCTGACCCTT 57.148 40.909 0.00 0.00 0.00 3.95
502 512 5.356751 TGACCATTTTCGCATACTTTAGCAT 59.643 36.000 0.00 0.00 0.00 3.79
513 523 2.097629 TCGTGTTTTGACCATTTTCGCA 59.902 40.909 0.00 0.00 0.00 5.10
514 524 2.722071 TCGTGTTTTGACCATTTTCGC 58.278 42.857 0.00 0.00 0.00 4.70
521 531 5.508200 AGCTAAATTTCGTGTTTTGACCA 57.492 34.783 0.00 0.00 0.00 4.02
543 553 3.676291 GCATTAGCCCAACTCCAAAAA 57.324 42.857 0.00 0.00 33.58 1.94
556 566 1.517361 GGGCTGTTTGGGCATTAGC 59.483 57.895 0.00 0.00 41.10 3.09
712 731 4.202409 CCACCTTCTTCTCCTTGTTCTCTT 60.202 45.833 0.00 0.00 0.00 2.85
845 870 0.696501 TTTAAGAGGTGGGGCTGGAC 59.303 55.000 0.00 0.00 0.00 4.02
866 891 1.070105 CGTTCGGGTTTGGTCTGGA 59.930 57.895 0.00 0.00 0.00 3.86
1290 1319 4.779733 GGCGGGGAGGAGGTCTCA 62.780 72.222 0.14 0.00 44.19 3.27
1496 1525 1.050988 ATCGGAGTGTGGGGGAGATG 61.051 60.000 0.00 0.00 0.00 2.90
1523 1552 2.947852 ACTGACACTAGCGCAAGTAAG 58.052 47.619 11.47 7.26 41.68 2.34
1634 1667 2.315720 AAGCTCAAGGCATTTCCCTT 57.684 45.000 0.00 0.00 45.94 3.95
1635 1668 2.357569 CCTAAGCTCAAGGCATTTCCCT 60.358 50.000 2.31 0.00 44.79 4.20
1637 1670 2.027385 CCCTAAGCTCAAGGCATTTCC 58.973 52.381 9.18 0.00 44.79 3.13
1638 1671 3.004752 TCCCTAAGCTCAAGGCATTTC 57.995 47.619 9.18 0.00 44.79 2.17
1639 1672 3.456380 TTCCCTAAGCTCAAGGCATTT 57.544 42.857 9.18 0.00 44.79 2.32
1640 1673 3.456380 TTTCCCTAAGCTCAAGGCATT 57.544 42.857 9.18 0.00 44.79 3.56
1641 1674 3.456380 TTTTCCCTAAGCTCAAGGCAT 57.544 42.857 9.18 0.00 44.79 4.40
1642 1675 2.969821 TTTTCCCTAAGCTCAAGGCA 57.030 45.000 9.18 0.00 44.79 4.75
1643 1676 4.261783 GCATATTTTCCCTAAGCTCAAGGC 60.262 45.833 9.18 0.00 42.19 4.35
1644 1677 4.023707 CGCATATTTTCCCTAAGCTCAAGG 60.024 45.833 7.91 7.91 0.00 3.61
1645 1678 4.555511 GCGCATATTTTCCCTAAGCTCAAG 60.556 45.833 0.30 0.00 0.00 3.02
1646 1679 3.315191 GCGCATATTTTCCCTAAGCTCAA 59.685 43.478 0.30 0.00 0.00 3.02
1647 1680 2.878406 GCGCATATTTTCCCTAAGCTCA 59.122 45.455 0.30 0.00 0.00 4.26
1654 1688 2.825205 GCAAATGCGCATATTTTCCCT 58.175 42.857 25.61 1.45 0.00 4.20
1697 1731 5.449304 GCAAAGAAACAAACAGTACGCTAT 58.551 37.500 0.00 0.00 0.00 2.97
1888 1922 4.211374 GCGAATTACAGCTACCCAGTATTG 59.789 45.833 0.00 0.00 0.00 1.90
1893 1928 2.604046 AGCGAATTACAGCTACCCAG 57.396 50.000 1.28 0.00 42.60 4.45
1958 1993 5.710099 TCCATAACAATCCAGTTCTCCAAAC 59.290 40.000 0.00 0.00 33.07 2.93
2042 2369 3.959535 ACAATAAGTTTGCATGGGTGG 57.040 42.857 0.00 0.00 0.00 4.61
2043 2370 5.167845 GGTTACAATAAGTTTGCATGGGTG 58.832 41.667 0.00 0.00 0.00 4.61
2146 2474 4.081642 CGGAGAAATGTAGGTGAGAAAGGA 60.082 45.833 0.00 0.00 0.00 3.36
2215 2543 9.906660 GAAATTGGTTTTAGTCAATGTGATGTA 57.093 29.630 0.00 0.00 34.28 2.29
2298 2631 2.175878 AAGACTAACTGCTGCACCAG 57.824 50.000 7.50 7.50 38.78 4.00
2317 2650 6.231951 TGGTAACGTCTCCACAATATTGAAA 58.768 36.000 22.16 5.84 42.51 2.69
2339 2672 9.099454 GGAAGTACTGTTAAAGATTATCACTGG 57.901 37.037 0.00 0.00 0.00 4.00
2401 2734 9.778993 CAACTCGCTTGTTTAATACTACTACTA 57.221 33.333 0.00 0.00 0.00 1.82
2402 2735 8.302438 ACAACTCGCTTGTTTAATACTACTACT 58.698 33.333 0.00 0.00 40.45 2.57
2403 2736 8.371053 CACAACTCGCTTGTTTAATACTACTAC 58.629 37.037 0.00 0.00 41.50 2.73
2449 2782 6.525629 CCATTGGATCTAAGATAACGAAGGT 58.474 40.000 0.00 0.00 0.00 3.50
2554 2887 6.377327 ACGGTGATTTGATTGATTGATACC 57.623 37.500 0.00 0.00 0.00 2.73
2635 2970 7.877097 AGATGTTTGTTTTGGCATGCTAATTAA 59.123 29.630 17.82 7.06 0.00 1.40
2690 3026 6.658831 TCAAGTCGACTGATTTGAAAACATC 58.341 36.000 20.85 0.00 44.73 3.06
2726 3062 1.375013 TTCGCGGCTTACAGGGTTC 60.375 57.895 6.13 0.00 0.00 3.62
2954 3290 6.513180 TCAGAGAGTTAACACAAGGTTACAG 58.487 40.000 8.61 0.00 41.55 2.74
3165 3501 2.263895 ACTTACTGGGCCTGATACCA 57.736 50.000 18.12 0.00 35.05 3.25
3306 3642 2.975489 AGCCCTAGTCCATACATCCAAG 59.025 50.000 0.00 0.00 0.00 3.61
3415 3751 8.180317 ACCATAATATAAAACGTTTTTGCAGC 57.820 30.769 29.42 0.00 0.00 5.25
3583 3919 3.441222 CAGCAACCTAGAAACATGATGCA 59.559 43.478 0.00 0.00 35.11 3.96
3935 4273 8.655935 AATTTATCTTCACCAGGAACAAAGAT 57.344 30.769 0.00 4.73 39.38 2.40
3938 4276 8.141268 GTCAAATTTATCTTCACCAGGAACAAA 58.859 33.333 0.00 0.00 0.00 2.83
4022 4360 3.760684 GGTGTCATGCCAAGAGAGAAAAT 59.239 43.478 0.00 0.00 0.00 1.82
4046 4384 5.482526 ACAAAACCAACTTTAACCCTGTTCT 59.517 36.000 0.00 0.00 0.00 3.01
4060 4398 4.113354 TGCGGTAATTTGACAAAACCAAC 58.887 39.130 17.81 11.45 0.00 3.77
4196 4552 1.856539 TTCCGGACGGAGGGAGTACT 61.857 60.000 13.64 0.00 46.06 2.73
4197 4553 0.967380 TTTCCGGACGGAGGGAGTAC 60.967 60.000 13.64 0.00 46.06 2.73
4198 4554 0.032813 ATTTCCGGACGGAGGGAGTA 60.033 55.000 13.64 0.00 46.06 2.59
4199 4555 0.032813 TATTTCCGGACGGAGGGAGT 60.033 55.000 13.64 0.00 46.06 3.85
4200 4556 0.388294 GTATTTCCGGACGGAGGGAG 59.612 60.000 13.64 0.00 46.06 4.30
4201 4557 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20
4202 4558 0.828677 AAGTATTTCCGGACGGAGGG 59.171 55.000 13.64 0.00 46.06 4.30
4203 4559 1.479323 TCAAGTATTTCCGGACGGAGG 59.521 52.381 13.64 0.00 46.06 4.30
4204 4560 2.094390 TGTCAAGTATTTCCGGACGGAG 60.094 50.000 13.64 0.73 46.06 4.63
4205 4561 1.894466 TGTCAAGTATTTCCGGACGGA 59.106 47.619 1.83 9.76 43.52 4.69
4206 4562 2.373540 TGTCAAGTATTTCCGGACGG 57.626 50.000 1.83 3.96 0.00 4.79
4207 4563 3.517602 TGATGTCAAGTATTTCCGGACG 58.482 45.455 1.83 0.00 0.00 4.79
4208 4564 4.693566 TGTTGATGTCAAGTATTTCCGGAC 59.306 41.667 1.83 0.00 36.39 4.79
4209 4565 4.900684 TGTTGATGTCAAGTATTTCCGGA 58.099 39.130 0.00 0.00 36.39 5.14
4210 4566 5.353956 TCATGTTGATGTCAAGTATTTCCGG 59.646 40.000 0.00 0.00 36.39 5.14
4211 4567 6.421377 TCATGTTGATGTCAAGTATTTCCG 57.579 37.500 0.00 0.00 36.39 4.30
4217 4573 8.739039 CCCTTTTATTCATGTTGATGTCAAGTA 58.261 33.333 0.00 0.00 36.39 2.24
4218 4574 7.309990 CCCCTTTTATTCATGTTGATGTCAAGT 60.310 37.037 0.00 0.00 36.39 3.16
4219 4575 7.037438 CCCCTTTTATTCATGTTGATGTCAAG 58.963 38.462 0.00 0.00 36.39 3.02
4220 4576 6.723515 TCCCCTTTTATTCATGTTGATGTCAA 59.276 34.615 0.00 0.00 0.00 3.18
4221 4577 6.252233 TCCCCTTTTATTCATGTTGATGTCA 58.748 36.000 0.00 0.00 0.00 3.58
4222 4578 6.773976 TCCCCTTTTATTCATGTTGATGTC 57.226 37.500 0.00 0.00 0.00 3.06
4223 4579 6.669154 ACATCCCCTTTTATTCATGTTGATGT 59.331 34.615 0.00 0.00 35.53 3.06
4224 4580 7.116075 ACATCCCCTTTTATTCATGTTGATG 57.884 36.000 0.00 0.00 33.80 3.07
4225 4581 9.082313 GATACATCCCCTTTTATTCATGTTGAT 57.918 33.333 0.00 0.00 0.00 2.57
4226 4582 8.281531 AGATACATCCCCTTTTATTCATGTTGA 58.718 33.333 0.00 0.00 0.00 3.18
4227 4583 8.469309 AGATACATCCCCTTTTATTCATGTTG 57.531 34.615 0.00 0.00 0.00 3.33
4228 4584 9.799106 CTAGATACATCCCCTTTTATTCATGTT 57.201 33.333 0.00 0.00 0.00 2.71
4229 4585 9.170890 TCTAGATACATCCCCTTTTATTCATGT 57.829 33.333 0.00 0.00 0.00 3.21
4232 4588 9.170890 ACATCTAGATACATCCCCTTTTATTCA 57.829 33.333 4.54 0.00 0.00 2.57
4240 4596 9.845214 ACTAAAATACATCTAGATACATCCCCT 57.155 33.333 4.54 0.00 0.00 4.79
4264 4620 9.170890 TGGATAAAATGGGATGTATCTAGAACT 57.829 33.333 0.00 0.00 0.00 3.01
4265 4621 9.965902 ATGGATAAAATGGGATGTATCTAGAAC 57.034 33.333 0.00 0.00 0.00 3.01
4270 4626 9.659135 TCAAAATGGATAAAATGGGATGTATCT 57.341 29.630 0.00 0.00 0.00 1.98
4273 4629 9.431690 TCATCAAAATGGATAAAATGGGATGTA 57.568 29.630 0.00 0.00 33.42 2.29
4274 4630 8.206189 GTCATCAAAATGGATAAAATGGGATGT 58.794 33.333 0.00 0.00 33.42 3.06
4275 4631 8.205512 TGTCATCAAAATGGATAAAATGGGATG 58.794 33.333 0.00 0.00 33.42 3.51
4276 4632 8.321621 TGTCATCAAAATGGATAAAATGGGAT 57.678 30.769 0.00 0.00 33.42 3.85
4277 4633 7.730672 TGTCATCAAAATGGATAAAATGGGA 57.269 32.000 0.00 0.00 33.42 4.37
4278 4634 8.042515 ACTTGTCATCAAAATGGATAAAATGGG 58.957 33.333 0.00 0.00 33.42 4.00
4286 4642 7.975616 CCGAAAATACTTGTCATCAAAATGGAT 59.024 33.333 0.00 0.00 33.42 3.41
4287 4643 7.175816 TCCGAAAATACTTGTCATCAAAATGGA 59.824 33.333 0.00 0.00 33.42 3.41
4288 4644 7.273381 GTCCGAAAATACTTGTCATCAAAATGG 59.727 37.037 0.00 0.00 33.42 3.16
4289 4645 7.007367 CGTCCGAAAATACTTGTCATCAAAATG 59.993 37.037 0.00 0.00 32.87 2.32
4290 4646 7.021196 CGTCCGAAAATACTTGTCATCAAAAT 58.979 34.615 0.00 0.00 32.87 1.82
4291 4647 6.367421 CGTCCGAAAATACTTGTCATCAAAA 58.633 36.000 0.00 0.00 32.87 2.44
4292 4648 5.106869 CCGTCCGAAAATACTTGTCATCAAA 60.107 40.000 0.00 0.00 32.87 2.69
4293 4649 4.390603 CCGTCCGAAAATACTTGTCATCAA 59.609 41.667 0.00 0.00 0.00 2.57
4294 4650 3.930229 CCGTCCGAAAATACTTGTCATCA 59.070 43.478 0.00 0.00 0.00 3.07
4295 4651 4.178540 TCCGTCCGAAAATACTTGTCATC 58.821 43.478 0.00 0.00 0.00 2.92
4296 4652 4.181578 CTCCGTCCGAAAATACTTGTCAT 58.818 43.478 0.00 0.00 0.00 3.06
4297 4653 3.581755 CTCCGTCCGAAAATACTTGTCA 58.418 45.455 0.00 0.00 0.00 3.58
4298 4654 2.928116 CCTCCGTCCGAAAATACTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
4299 4655 2.354403 CCCTCCGTCCGAAAATACTTGT 60.354 50.000 0.00 0.00 0.00 3.16
4300 4656 2.093869 TCCCTCCGTCCGAAAATACTTG 60.094 50.000 0.00 0.00 0.00 3.16
4301 4657 2.167900 CTCCCTCCGTCCGAAAATACTT 59.832 50.000 0.00 0.00 0.00 2.24
4302 4658 1.755380 CTCCCTCCGTCCGAAAATACT 59.245 52.381 0.00 0.00 0.00 2.12
4303 4659 1.479730 ACTCCCTCCGTCCGAAAATAC 59.520 52.381 0.00 0.00 0.00 1.89
4304 4660 1.856629 ACTCCCTCCGTCCGAAAATA 58.143 50.000 0.00 0.00 0.00 1.40
4305 4661 1.856629 TACTCCCTCCGTCCGAAAAT 58.143 50.000 0.00 0.00 0.00 1.82
4306 4662 1.479323 CATACTCCCTCCGTCCGAAAA 59.521 52.381 0.00 0.00 0.00 2.29
4307 4663 1.108776 CATACTCCCTCCGTCCGAAA 58.891 55.000 0.00 0.00 0.00 3.46
4308 4664 0.033796 ACATACTCCCTCCGTCCGAA 60.034 55.000 0.00 0.00 0.00 4.30
4309 4665 0.033796 AACATACTCCCTCCGTCCGA 60.034 55.000 0.00 0.00 0.00 4.55
4310 4666 0.102481 CAACATACTCCCTCCGTCCG 59.898 60.000 0.00 0.00 0.00 4.79
4311 4667 1.192428 ACAACATACTCCCTCCGTCC 58.808 55.000 0.00 0.00 0.00 4.79
4312 4668 3.194116 TGTTACAACATACTCCCTCCGTC 59.806 47.826 0.00 0.00 33.17 4.79
4313 4669 3.167485 TGTTACAACATACTCCCTCCGT 58.833 45.455 0.00 0.00 33.17 4.69
4314 4670 3.880047 TGTTACAACATACTCCCTCCG 57.120 47.619 0.00 0.00 33.17 4.63
4315 4671 5.182570 GGTTTTGTTACAACATACTCCCTCC 59.817 44.000 0.00 0.00 38.95 4.30
4316 4672 6.002082 AGGTTTTGTTACAACATACTCCCTC 58.998 40.000 0.00 0.00 38.95 4.30
4317 4673 5.768164 CAGGTTTTGTTACAACATACTCCCT 59.232 40.000 0.00 0.00 38.95 4.20
4318 4674 5.048294 CCAGGTTTTGTTACAACATACTCCC 60.048 44.000 0.00 0.00 38.95 4.30
4319 4675 5.533528 ACCAGGTTTTGTTACAACATACTCC 59.466 40.000 0.00 0.00 38.95 3.85
4320 4676 6.628919 ACCAGGTTTTGTTACAACATACTC 57.371 37.500 0.00 0.00 38.95 2.59
4542 4898 4.538490 TGGTTTGGTACATTAGGATGAGGT 59.462 41.667 0.00 0.00 39.30 3.85
4941 5299 5.212745 TCCCCAATATAATCCCAAACAACC 58.787 41.667 0.00 0.00 0.00 3.77
5205 6529 7.595502 GCCGCTTGGTCTATATATATGTACATC 59.404 40.741 12.68 0.00 34.16 3.06
5206 6530 7.434492 GCCGCTTGGTCTATATATATGTACAT 58.566 38.462 13.93 13.93 34.16 2.29
5207 6531 6.183360 GGCCGCTTGGTCTATATATATGTACA 60.183 42.308 5.44 0.00 33.30 2.90
5208 6532 6.183360 TGGCCGCTTGGTCTATATATATGTAC 60.183 42.308 5.44 3.57 38.57 2.90
5209 6533 5.894964 TGGCCGCTTGGTCTATATATATGTA 59.105 40.000 5.44 0.00 38.57 2.29
5210 6534 4.714802 TGGCCGCTTGGTCTATATATATGT 59.285 41.667 5.44 0.00 38.57 2.29
5211 6535 5.276461 TGGCCGCTTGGTCTATATATATG 57.724 43.478 5.44 0.00 38.57 1.78
5212 6536 4.202264 GCTGGCCGCTTGGTCTATATATAT 60.202 45.833 11.61 0.00 38.57 0.86
5213 6537 3.132289 GCTGGCCGCTTGGTCTATATATA 59.868 47.826 11.61 0.00 38.57 0.86
5214 6538 2.093447 GCTGGCCGCTTGGTCTATATAT 60.093 50.000 11.61 0.00 38.57 0.86
5215 6539 1.275291 GCTGGCCGCTTGGTCTATATA 59.725 52.381 11.61 0.00 38.57 0.86
5216 6540 0.035458 GCTGGCCGCTTGGTCTATAT 59.965 55.000 11.61 0.00 38.57 0.86
5217 6541 1.445942 GCTGGCCGCTTGGTCTATA 59.554 57.895 11.61 0.00 38.57 1.31
5218 6542 2.190578 GCTGGCCGCTTGGTCTAT 59.809 61.111 11.61 0.00 38.57 1.98
5246 6570 7.862512 TCTTTGATTGCAAAATTTTCTTGGT 57.137 28.000 1.71 0.00 42.96 3.67
5250 6574 9.545105 TGTACATCTTTGATTGCAAAATTTTCT 57.455 25.926 1.71 0.00 42.96 2.52
5296 6621 4.669206 TGTATTGGCTAATTTGGGCATG 57.331 40.909 9.78 0.00 38.95 4.06
5395 6720 9.258629 TCCAAAATAATGAATTCCAGAGAACAT 57.741 29.630 2.27 0.00 33.97 2.71
5396 6721 8.648698 TCCAAAATAATGAATTCCAGAGAACA 57.351 30.769 2.27 0.00 33.97 3.18
5397 6722 8.743714 ACTCCAAAATAATGAATTCCAGAGAAC 58.256 33.333 2.27 0.00 33.97 3.01
5471 6802 8.706322 AGAAGGTTTATTGTCACTAATTTGGT 57.294 30.769 0.00 0.00 0.00 3.67
5472 6803 9.410556 CAAGAAGGTTTATTGTCACTAATTTGG 57.589 33.333 0.00 0.00 0.00 3.28
5473 6804 9.410556 CCAAGAAGGTTTATTGTCACTAATTTG 57.589 33.333 0.00 0.00 0.00 2.32
5474 6805 8.088365 GCCAAGAAGGTTTATTGTCACTAATTT 58.912 33.333 0.00 0.00 40.61 1.82
5475 6806 7.451566 AGCCAAGAAGGTTTATTGTCACTAATT 59.548 33.333 0.00 0.00 40.61 1.40
5476 6807 6.948309 AGCCAAGAAGGTTTATTGTCACTAAT 59.052 34.615 0.00 0.00 40.61 1.73
5477 6808 6.303839 AGCCAAGAAGGTTTATTGTCACTAA 58.696 36.000 0.00 0.00 40.61 2.24
5478 6809 5.876357 AGCCAAGAAGGTTTATTGTCACTA 58.124 37.500 0.00 0.00 40.61 2.74
5479 6810 4.729868 AGCCAAGAAGGTTTATTGTCACT 58.270 39.130 0.00 0.00 40.61 3.41
5480 6811 5.453567 AAGCCAAGAAGGTTTATTGTCAC 57.546 39.130 0.00 0.00 39.28 3.67
5481 6812 5.221422 CCAAAGCCAAGAAGGTTTATTGTCA 60.221 40.000 0.00 0.00 40.29 3.58
5482 6813 5.010617 TCCAAAGCCAAGAAGGTTTATTGTC 59.989 40.000 0.00 0.00 40.29 3.18
5483 6814 4.898861 TCCAAAGCCAAGAAGGTTTATTGT 59.101 37.500 0.00 0.00 40.29 2.71
5484 6815 5.467035 TCCAAAGCCAAGAAGGTTTATTG 57.533 39.130 0.00 0.00 40.29 1.90
5485 6816 5.569428 GCATCCAAAGCCAAGAAGGTTTATT 60.569 40.000 0.00 0.00 40.29 1.40
5486 6817 4.081476 GCATCCAAAGCCAAGAAGGTTTAT 60.081 41.667 0.00 0.00 40.29 1.40
5487 6818 3.258123 GCATCCAAAGCCAAGAAGGTTTA 59.742 43.478 0.00 0.00 40.29 2.01
5488 6819 2.037641 GCATCCAAAGCCAAGAAGGTTT 59.962 45.455 0.00 0.00 43.40 3.27
5489 6820 1.620323 GCATCCAAAGCCAAGAAGGTT 59.380 47.619 0.00 0.00 40.61 3.50
5490 6821 1.260544 GCATCCAAAGCCAAGAAGGT 58.739 50.000 0.00 0.00 40.61 3.50
5491 6822 0.171903 CGCATCCAAAGCCAAGAAGG 59.828 55.000 0.00 0.00 41.84 3.46
5492 6823 0.171903 CCGCATCCAAAGCCAAGAAG 59.828 55.000 0.00 0.00 0.00 2.85
5493 6824 1.250154 CCCGCATCCAAAGCCAAGAA 61.250 55.000 0.00 0.00 0.00 2.52
5494 6825 1.678635 CCCGCATCCAAAGCCAAGA 60.679 57.895 0.00 0.00 0.00 3.02
5495 6826 1.660560 CTCCCGCATCCAAAGCCAAG 61.661 60.000 0.00 0.00 0.00 3.61
5496 6827 1.678635 CTCCCGCATCCAAAGCCAA 60.679 57.895 0.00 0.00 0.00 4.52
5497 6828 2.045045 CTCCCGCATCCAAAGCCA 60.045 61.111 0.00 0.00 0.00 4.75
5498 6829 1.250840 AAACTCCCGCATCCAAAGCC 61.251 55.000 0.00 0.00 0.00 4.35
5499 6830 0.109132 CAAACTCCCGCATCCAAAGC 60.109 55.000 0.00 0.00 0.00 3.51
5500 6831 1.470098 CTCAAACTCCCGCATCCAAAG 59.530 52.381 0.00 0.00 0.00 2.77
5501 6832 1.073125 TCTCAAACTCCCGCATCCAAA 59.927 47.619 0.00 0.00 0.00 3.28
5502 6833 0.690192 TCTCAAACTCCCGCATCCAA 59.310 50.000 0.00 0.00 0.00 3.53
5503 6834 0.911769 ATCTCAAACTCCCGCATCCA 59.088 50.000 0.00 0.00 0.00 3.41
5504 6835 1.134401 TCATCTCAAACTCCCGCATCC 60.134 52.381 0.00 0.00 0.00 3.51
5505 6836 2.208431 CTCATCTCAAACTCCCGCATC 58.792 52.381 0.00 0.00 0.00 3.91
5506 6837 1.134280 CCTCATCTCAAACTCCCGCAT 60.134 52.381 0.00 0.00 0.00 4.73
5507 6838 0.250234 CCTCATCTCAAACTCCCGCA 59.750 55.000 0.00 0.00 0.00 5.69
5508 6839 0.250513 ACCTCATCTCAAACTCCCGC 59.749 55.000 0.00 0.00 0.00 6.13
5509 6840 1.406069 CCACCTCATCTCAAACTCCCG 60.406 57.143 0.00 0.00 0.00 5.14
5510 6841 1.630878 ACCACCTCATCTCAAACTCCC 59.369 52.381 0.00 0.00 0.00 4.30
5511 6842 3.118592 CCTACCACCTCATCTCAAACTCC 60.119 52.174 0.00 0.00 0.00 3.85
5512 6843 3.118592 CCCTACCACCTCATCTCAAACTC 60.119 52.174 0.00 0.00 0.00 3.01
5513 6844 2.840651 CCCTACCACCTCATCTCAAACT 59.159 50.000 0.00 0.00 0.00 2.66
5514 6845 2.681097 GCCCTACCACCTCATCTCAAAC 60.681 54.545 0.00 0.00 0.00 2.93
5515 6846 1.559682 GCCCTACCACCTCATCTCAAA 59.440 52.381 0.00 0.00 0.00 2.69
5516 6847 1.204146 GCCCTACCACCTCATCTCAA 58.796 55.000 0.00 0.00 0.00 3.02
5517 6848 0.042581 TGCCCTACCACCTCATCTCA 59.957 55.000 0.00 0.00 0.00 3.27
5518 6849 1.346068 GATGCCCTACCACCTCATCTC 59.654 57.143 0.00 0.00 32.92 2.75
5519 6850 1.061812 AGATGCCCTACCACCTCATCT 60.062 52.381 0.00 0.00 39.05 2.90
5520 6851 1.346068 GAGATGCCCTACCACCTCATC 59.654 57.143 0.00 0.00 35.14 2.92
5521 6852 1.428869 GAGATGCCCTACCACCTCAT 58.571 55.000 0.00 0.00 0.00 2.90
5522 6853 0.691078 GGAGATGCCCTACCACCTCA 60.691 60.000 0.00 0.00 0.00 3.86
5523 6854 0.691078 TGGAGATGCCCTACCACCTC 60.691 60.000 0.00 0.00 34.97 3.85
5524 6855 0.253160 TTGGAGATGCCCTACCACCT 60.253 55.000 0.00 0.00 34.97 4.00
5525 6856 0.107165 GTTGGAGATGCCCTACCACC 60.107 60.000 0.00 0.00 34.97 4.61
5526 6857 0.462047 CGTTGGAGATGCCCTACCAC 60.462 60.000 0.00 0.00 34.97 4.16
5527 6858 1.904771 CGTTGGAGATGCCCTACCA 59.095 57.895 0.00 0.00 34.97 3.25
5528 6859 1.523938 GCGTTGGAGATGCCCTACC 60.524 63.158 0.00 0.00 34.03 3.18
5529 6860 1.883084 CGCGTTGGAGATGCCCTAC 60.883 63.158 0.00 0.00 36.93 3.18
5530 6861 2.499205 CGCGTTGGAGATGCCCTA 59.501 61.111 0.00 0.00 36.93 3.53
5533 6864 4.166011 GTGCGCGTTGGAGATGCC 62.166 66.667 8.43 0.00 36.93 4.40
5534 6865 4.505217 CGTGCGCGTTGGAGATGC 62.505 66.667 12.43 0.00 36.90 3.91
5535 6866 2.283780 CTTCGTGCGCGTTGGAGATG 62.284 60.000 20.50 0.00 39.49 2.90
5536 6867 2.048597 TTCGTGCGCGTTGGAGAT 60.049 55.556 20.50 0.00 39.49 2.75
5537 6868 2.733218 CTTCGTGCGCGTTGGAGA 60.733 61.111 20.50 0.00 39.49 3.71
5538 6869 3.000080 GACTTCGTGCGCGTTGGAG 62.000 63.158 20.50 14.93 39.49 3.86
5539 6870 3.033764 GACTTCGTGCGCGTTGGA 61.034 61.111 20.50 0.00 39.49 3.53
5540 6871 4.409588 CGACTTCGTGCGCGTTGG 62.410 66.667 20.50 12.82 39.49 3.77
5546 6877 1.827315 TTTGGAAGCGACTTCGTGCG 61.827 55.000 11.65 0.00 40.99 5.34
5547 6878 0.306533 TTTTGGAAGCGACTTCGTGC 59.693 50.000 11.65 2.15 40.99 5.34
5548 6879 2.032030 ACATTTTGGAAGCGACTTCGTG 60.032 45.455 11.65 8.57 40.99 4.35
5549 6880 2.218603 ACATTTTGGAAGCGACTTCGT 58.781 42.857 11.65 3.04 40.99 3.85
5550 6881 2.480419 AGACATTTTGGAAGCGACTTCG 59.520 45.455 11.65 0.00 40.99 3.79
5551 6882 3.365364 CCAGACATTTTGGAAGCGACTTC 60.365 47.826 10.08 10.08 39.52 3.01
5552 6883 2.554032 CCAGACATTTTGGAAGCGACTT 59.446 45.455 0.00 0.00 37.96 3.01
5553 6884 2.154462 CCAGACATTTTGGAAGCGACT 58.846 47.619 0.00 0.00 37.96 4.18
5554 6885 2.095718 GTCCAGACATTTTGGAAGCGAC 60.096 50.000 0.00 0.00 45.79 5.19
5555 6886 2.151202 GTCCAGACATTTTGGAAGCGA 58.849 47.619 0.00 0.00 45.79 4.93
5556 6887 2.095567 CAGTCCAGACATTTTGGAAGCG 60.096 50.000 0.00 0.00 45.79 4.68
5557 6888 2.229784 CCAGTCCAGACATTTTGGAAGC 59.770 50.000 0.00 0.00 45.79 3.86
5558 6889 3.754965 TCCAGTCCAGACATTTTGGAAG 58.245 45.455 4.50 0.00 45.79 3.46
5559 6890 3.874383 TCCAGTCCAGACATTTTGGAA 57.126 42.857 4.50 0.00 45.79 3.53
5560 6891 3.561960 CCATCCAGTCCAGACATTTTGGA 60.562 47.826 8.45 8.45 42.30 3.53
5561 6892 2.756760 CCATCCAGTCCAGACATTTTGG 59.243 50.000 0.00 0.00 37.04 3.28
5562 6893 3.424703 ACCATCCAGTCCAGACATTTTG 58.575 45.455 0.00 0.00 0.00 2.44
5563 6894 3.814504 ACCATCCAGTCCAGACATTTT 57.185 42.857 0.00 0.00 0.00 1.82
5564 6895 3.074390 TGAACCATCCAGTCCAGACATTT 59.926 43.478 0.00 0.00 0.00 2.32
5565 6896 2.644299 TGAACCATCCAGTCCAGACATT 59.356 45.455 0.00 0.00 0.00 2.71
5566 6897 2.026822 GTGAACCATCCAGTCCAGACAT 60.027 50.000 0.00 0.00 0.00 3.06
5567 6898 1.347707 GTGAACCATCCAGTCCAGACA 59.652 52.381 0.00 0.00 0.00 3.41
5568 6899 1.347707 TGTGAACCATCCAGTCCAGAC 59.652 52.381 0.00 0.00 0.00 3.51
5569 6900 1.347707 GTGTGAACCATCCAGTCCAGA 59.652 52.381 0.00 0.00 0.00 3.86
5570 6901 1.072173 TGTGTGAACCATCCAGTCCAG 59.928 52.381 0.00 0.00 0.00 3.86
5571 6902 1.135960 TGTGTGAACCATCCAGTCCA 58.864 50.000 0.00 0.00 0.00 4.02
5572 6903 2.496899 ATGTGTGAACCATCCAGTCC 57.503 50.000 0.00 0.00 0.00 3.85
5573 6904 4.853924 AAAATGTGTGAACCATCCAGTC 57.146 40.909 0.00 0.00 0.00 3.51
5574 6905 5.243730 CCTAAAAATGTGTGAACCATCCAGT 59.756 40.000 0.00 0.00 0.00 4.00
5575 6906 5.243730 ACCTAAAAATGTGTGAACCATCCAG 59.756 40.000 0.00 0.00 0.00 3.86
5576 6907 5.144100 ACCTAAAAATGTGTGAACCATCCA 58.856 37.500 0.00 0.00 0.00 3.41
5577 6908 5.476945 AGACCTAAAAATGTGTGAACCATCC 59.523 40.000 0.00 0.00 0.00 3.51
5578 6909 6.349363 GGAGACCTAAAAATGTGTGAACCATC 60.349 42.308 0.00 0.00 0.00 3.51
5579 6910 5.476945 GGAGACCTAAAAATGTGTGAACCAT 59.523 40.000 0.00 0.00 0.00 3.55
5580 6911 4.825085 GGAGACCTAAAAATGTGTGAACCA 59.175 41.667 0.00 0.00 0.00 3.67
5581 6912 4.825085 TGGAGACCTAAAAATGTGTGAACC 59.175 41.667 0.00 0.00 0.00 3.62
5582 6913 6.206498 GTTGGAGACCTAAAAATGTGTGAAC 58.794 40.000 0.00 0.00 0.00 3.18
5583 6914 5.008217 CGTTGGAGACCTAAAAATGTGTGAA 59.992 40.000 0.00 0.00 0.00 3.18
5584 6915 4.513692 CGTTGGAGACCTAAAAATGTGTGA 59.486 41.667 0.00 0.00 0.00 3.58
5585 6916 4.274950 ACGTTGGAGACCTAAAAATGTGTG 59.725 41.667 0.00 0.00 0.00 3.82
5586 6917 4.274950 CACGTTGGAGACCTAAAAATGTGT 59.725 41.667 0.00 0.00 34.54 3.72
5587 6918 4.320202 CCACGTTGGAGACCTAAAAATGTG 60.320 45.833 0.00 0.00 40.96 3.21
5588 6919 3.818773 CCACGTTGGAGACCTAAAAATGT 59.181 43.478 0.00 0.00 40.96 2.71
5589 6920 3.818773 ACCACGTTGGAGACCTAAAAATG 59.181 43.478 10.46 0.00 40.96 2.32
5590 6921 4.070009 GACCACGTTGGAGACCTAAAAAT 58.930 43.478 10.46 0.00 40.96 1.82
5591 6922 3.469739 GACCACGTTGGAGACCTAAAAA 58.530 45.455 10.46 0.00 40.96 1.94
5592 6923 2.546373 CGACCACGTTGGAGACCTAAAA 60.546 50.000 10.46 0.00 40.96 1.52
5593 6924 1.000060 CGACCACGTTGGAGACCTAAA 60.000 52.381 10.46 0.00 40.96 1.85
5594 6925 0.599558 CGACCACGTTGGAGACCTAA 59.400 55.000 10.46 0.00 40.96 2.69
5595 6926 2.260247 CGACCACGTTGGAGACCTA 58.740 57.895 10.46 0.00 40.96 3.08
5596 6927 3.048602 CGACCACGTTGGAGACCT 58.951 61.111 10.46 0.00 40.96 3.85
5609 6940 2.040544 CAGCCCAACATGGACGACC 61.041 63.158 0.00 0.00 40.96 4.79
5610 6941 0.036765 TACAGCCCAACATGGACGAC 60.037 55.000 0.00 0.00 40.96 4.34
5611 6942 0.036765 GTACAGCCCAACATGGACGA 60.037 55.000 0.00 0.00 40.96 4.20
5612 6943 1.024579 GGTACAGCCCAACATGGACG 61.025 60.000 0.00 0.00 40.96 4.79
5613 6944 1.024579 CGGTACAGCCCAACATGGAC 61.025 60.000 0.00 0.00 40.96 4.02
5614 6945 1.298340 CGGTACAGCCCAACATGGA 59.702 57.895 0.00 0.00 40.96 3.41
5615 6946 1.002624 ACGGTACAGCCCAACATGG 60.003 57.895 0.00 0.00 37.25 3.66
5616 6947 0.036388 AGACGGTACAGCCCAACATG 60.036 55.000 0.00 0.00 0.00 3.21
5617 6948 1.480954 CTAGACGGTACAGCCCAACAT 59.519 52.381 0.00 0.00 0.00 2.71
5618 6949 0.892755 CTAGACGGTACAGCCCAACA 59.107 55.000 0.00 0.00 0.00 3.33
5619 6950 1.135170 GTCTAGACGGTACAGCCCAAC 60.135 57.143 7.22 0.00 0.00 3.77
5620 6951 1.180029 GTCTAGACGGTACAGCCCAA 58.820 55.000 7.22 0.00 0.00 4.12
5621 6952 2.877975 GTCTAGACGGTACAGCCCA 58.122 57.895 7.22 0.00 0.00 5.36
5632 6963 2.093658 TGGGGATTTTGAGCGTCTAGAC 60.094 50.000 13.18 13.18 0.00 2.59
5633 6964 2.093658 GTGGGGATTTTGAGCGTCTAGA 60.094 50.000 0.00 0.00 0.00 2.43
5634 6965 2.280628 GTGGGGATTTTGAGCGTCTAG 58.719 52.381 0.00 0.00 0.00 2.43
5635 6966 1.404986 CGTGGGGATTTTGAGCGTCTA 60.405 52.381 0.00 0.00 0.00 2.59
5636 6967 0.673644 CGTGGGGATTTTGAGCGTCT 60.674 55.000 0.00 0.00 0.00 4.18
5637 6968 0.953960 ACGTGGGGATTTTGAGCGTC 60.954 55.000 0.00 0.00 0.00 5.19
5638 6969 0.953960 GACGTGGGGATTTTGAGCGT 60.954 55.000 0.00 0.00 0.00 5.07
5639 6970 1.794222 GACGTGGGGATTTTGAGCG 59.206 57.895 0.00 0.00 0.00 5.03
5640 6971 1.644786 CCGACGTGGGGATTTTGAGC 61.645 60.000 9.03 0.00 0.00 4.26
5641 6972 1.644786 GCCGACGTGGGGATTTTGAG 61.645 60.000 18.94 0.00 38.63 3.02
5642 6973 1.673009 GCCGACGTGGGGATTTTGA 60.673 57.895 18.94 0.00 38.63 2.69
5643 6974 2.696759 GGCCGACGTGGGGATTTTG 61.697 63.158 18.94 0.00 38.63 2.44
5644 6975 1.555477 TAGGCCGACGTGGGGATTTT 61.555 55.000 18.94 0.00 38.63 1.82
5645 6976 1.555477 TTAGGCCGACGTGGGGATTT 61.555 55.000 18.94 0.00 38.63 2.17
5646 6977 1.555477 TTTAGGCCGACGTGGGGATT 61.555 55.000 18.94 1.99 38.63 3.01
5647 6978 1.342672 ATTTAGGCCGACGTGGGGAT 61.343 55.000 18.94 2.60 38.63 3.85
5648 6979 1.963464 GATTTAGGCCGACGTGGGGA 61.963 60.000 18.94 0.00 38.63 4.81
5649 6980 1.523032 GATTTAGGCCGACGTGGGG 60.523 63.158 18.94 8.33 38.63 4.96
5650 6981 1.881252 CGATTTAGGCCGACGTGGG 60.881 63.158 12.94 12.94 38.63 4.61
5651 6982 1.153706 ACGATTTAGGCCGACGTGG 60.154 57.895 12.82 0.00 42.50 4.94
5652 6983 1.995991 CACGATTTAGGCCGACGTG 59.004 57.895 20.80 20.80 45.46 4.49
5653 6984 1.153706 CCACGATTTAGGCCGACGT 60.154 57.895 0.00 3.40 37.68 4.34
5654 6985 1.881252 CCCACGATTTAGGCCGACG 60.881 63.158 0.00 2.72 0.00 5.12
5655 6986 1.523032 CCCCACGATTTAGGCCGAC 60.523 63.158 0.00 0.00 0.00 4.79
5656 6987 1.991167 ACCCCACGATTTAGGCCGA 60.991 57.895 0.00 0.00 0.00 5.54
5657 6988 1.817941 CACCCCACGATTTAGGCCG 60.818 63.158 0.00 0.00 0.00 6.13
5658 6989 1.453197 CCACCCCACGATTTAGGCC 60.453 63.158 0.00 0.00 0.00 5.19
5659 6990 0.542805 TACCACCCCACGATTTAGGC 59.457 55.000 0.00 0.00 0.00 3.93
5660 6991 3.556423 GCTATACCACCCCACGATTTAGG 60.556 52.174 0.00 0.00 0.00 2.69
5661 6992 3.556423 GGCTATACCACCCCACGATTTAG 60.556 52.174 0.00 0.00 38.86 1.85
5662 6993 2.369532 GGCTATACCACCCCACGATTTA 59.630 50.000 0.00 0.00 38.86 1.40
5663 6994 1.142262 GGCTATACCACCCCACGATTT 59.858 52.381 0.00 0.00 38.86 2.17
5664 6995 0.763035 GGCTATACCACCCCACGATT 59.237 55.000 0.00 0.00 38.86 3.34
5665 6996 1.125711 GGGCTATACCACCCCACGAT 61.126 60.000 0.00 0.00 40.56 3.73
5666 6997 1.763256 GGGCTATACCACCCCACGA 60.763 63.158 0.00 0.00 40.56 4.35
5667 6998 2.826702 GGGCTATACCACCCCACG 59.173 66.667 0.00 0.00 40.56 4.94
5673 7004 1.545651 GCATCTTGGGGGCTATACCAC 60.546 57.143 0.00 0.00 43.58 4.16
5674 7005 0.771127 GCATCTTGGGGGCTATACCA 59.229 55.000 0.00 0.00 42.05 3.25
5675 7006 0.321653 CGCATCTTGGGGGCTATACC 60.322 60.000 0.00 0.00 37.93 2.73
5676 7007 0.685097 TCGCATCTTGGGGGCTATAC 59.315 55.000 0.00 0.00 0.00 1.47
5677 7008 1.656587 ATCGCATCTTGGGGGCTATA 58.343 50.000 0.00 0.00 0.00 1.31
5678 7009 0.773644 AATCGCATCTTGGGGGCTAT 59.226 50.000 0.00 0.00 0.00 2.97
5679 7010 0.108585 GAATCGCATCTTGGGGGCTA 59.891 55.000 0.00 0.00 0.00 3.93
5680 7011 1.152881 GAATCGCATCTTGGGGGCT 60.153 57.895 0.00 0.00 0.00 5.19
5681 7012 0.108585 TAGAATCGCATCTTGGGGGC 59.891 55.000 0.00 0.00 0.00 5.80
5682 7013 2.616510 GGATAGAATCGCATCTTGGGGG 60.617 54.545 0.00 0.00 0.00 5.40
5683 7014 2.304180 AGGATAGAATCGCATCTTGGGG 59.696 50.000 0.00 0.00 0.00 4.96
5684 7015 3.692257 AGGATAGAATCGCATCTTGGG 57.308 47.619 0.00 0.00 0.00 4.12
5685 7016 6.312426 GTGATTAGGATAGAATCGCATCTTGG 59.688 42.308 4.49 0.00 41.42 3.61
5686 7017 6.034363 CGTGATTAGGATAGAATCGCATCTTG 59.966 42.308 8.99 0.00 41.72 3.02
5687 7018 6.096036 CGTGATTAGGATAGAATCGCATCTT 58.904 40.000 8.99 0.00 41.72 2.40
5688 7019 5.184096 ACGTGATTAGGATAGAATCGCATCT 59.816 40.000 8.99 0.00 41.72 2.90
5689 7020 5.287274 CACGTGATTAGGATAGAATCGCATC 59.713 44.000 10.90 0.00 41.72 3.91
5690 7021 5.048013 TCACGTGATTAGGATAGAATCGCAT 60.048 40.000 15.76 0.00 41.72 4.73
5691 7022 4.277423 TCACGTGATTAGGATAGAATCGCA 59.723 41.667 15.76 0.00 41.72 5.10
5692 7023 4.795268 TCACGTGATTAGGATAGAATCGC 58.205 43.478 15.76 0.00 39.41 4.58
5693 7024 6.861329 CATCACGTGATTAGGATAGAATCG 57.139 41.667 28.04 8.65 36.30 3.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.