Multiple sequence alignment - TraesCS4D01G168900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G168900 chr4D 100.000 2384 0 0 1 2384 293861773 293859390 0.000000e+00 4403.0
1 TraesCS4D01G168900 chr4B 94.755 858 27 9 789 1645 291848154 291847314 0.000000e+00 1319.0
2 TraesCS4D01G168900 chr4B 94.346 283 16 0 143 425 291850363 291850081 3.640000e-118 435.0
3 TraesCS4D01G168900 chr4B 91.282 195 13 2 1653 1846 291810564 291810373 1.820000e-66 263.0
4 TraesCS4D01G168900 chr4B 82.986 288 29 12 505 788 291848467 291848196 2.370000e-60 243.0
5 TraesCS4D01G168900 chr4B 96.800 125 4 0 1864 1988 291810386 291810262 2.400000e-50 209.0
6 TraesCS4D01G168900 chr4B 90.909 110 10 0 1975 2084 291807783 291807674 5.310000e-32 148.0
7 TraesCS4D01G168900 chr4B 95.890 73 3 0 439 511 291848923 291848851 4.160000e-23 119.0
8 TraesCS4D01G168900 chr4A 91.506 883 28 15 703 1555 323789359 323788494 0.000000e+00 1171.0
9 TraesCS4D01G168900 chr4A 90.526 380 14 3 143 500 323850131 323849752 1.280000e-132 483.0
10 TraesCS4D01G168900 chr4A 87.755 196 16 2 1896 2083 323697778 323697583 3.080000e-54 222.0
11 TraesCS4D01G168900 chr4A 85.802 162 12 2 1686 1846 322166833 322166984 6.820000e-36 161.0
12 TraesCS4D01G168900 chr4A 92.941 85 3 1 498 582 323849673 323849592 1.160000e-23 121.0
13 TraesCS4D01G168900 chr2D 83.236 513 65 13 891 1402 650363070 650363562 3.610000e-123 451.0
14 TraesCS4D01G168900 chr2D 80.144 418 59 16 985 1402 650358423 650358816 8.340000e-75 291.0
15 TraesCS4D01G168900 chr2D 97.222 144 4 0 1 144 527495046 527495189 6.580000e-61 244.0
16 TraesCS4D01G168900 chr2D 95.946 148 6 0 1 148 270844020 270843873 8.520000e-60 241.0
17 TraesCS4D01G168900 chr2D 94.805 154 6 1 1 154 591952183 591952032 3.060000e-59 239.0
18 TraesCS4D01G168900 chr2D 97.368 38 1 0 1545 1582 650358852 650358889 5.500000e-07 65.8
19 TraesCS4D01G168900 chr2B 81.205 415 54 6 985 1387 786677870 786678272 1.780000e-81 313.0
20 TraesCS4D01G168900 chr2B 92.105 38 3 0 1545 1582 786628045 786628082 1.000000e-03 54.7
21 TraesCS4D01G168900 chr2B 92.105 38 3 0 1545 1582 786733868 786733905 1.000000e-03 54.7
22 TraesCS4D01G168900 chr2A 80.460 435 57 17 988 1422 774370246 774369840 8.280000e-80 307.0
23 TraesCS4D01G168900 chr2A 80.460 435 57 17 988 1422 774432147 774431741 8.280000e-80 307.0
24 TraesCS4D01G168900 chr2A 100.000 38 0 0 1545 1582 774369820 774369783 1.180000e-08 71.3
25 TraesCS4D01G168900 chr2A 100.000 38 0 0 1545 1582 774431721 774431684 1.180000e-08 71.3
26 TraesCS4D01G168900 chr7D 98.611 144 2 0 1 144 489006270 489006413 3.040000e-64 255.0
27 TraesCS4D01G168900 chr7D 95.946 148 6 0 1 148 102576083 102575936 8.520000e-60 241.0
28 TraesCS4D01G168900 chr7D 95.946 148 6 0 2 149 599804201 599804348 8.520000e-60 241.0
29 TraesCS4D01G168900 chr5D 96.599 147 5 0 1 147 175936826 175936680 6.580000e-61 244.0
30 TraesCS4D01G168900 chr6D 95.946 148 6 0 1 148 472748082 472748229 8.520000e-60 241.0
31 TraesCS4D01G168900 chr6D 96.528 144 5 0 1 144 257631092 257631235 3.060000e-59 239.0
32 TraesCS4D01G168900 chr6D 87.879 66 6 2 2266 2329 394836036 394836101 2.540000e-10 76.8
33 TraesCS4D01G168900 chr3A 92.857 42 2 1 2266 2306 691095064 691095105 2.560000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G168900 chr4D 293859390 293861773 2383 True 4403.000000 4403 100.00000 1 2384 1 chr4D.!!$R1 2383
1 TraesCS4D01G168900 chr4B 291847314 291850363 3049 True 529.000000 1319 91.99425 143 1645 4 chr4B.!!$R2 1502
2 TraesCS4D01G168900 chr4B 291807674 291810564 2890 True 206.666667 263 92.99700 1653 2084 3 chr4B.!!$R1 431
3 TraesCS4D01G168900 chr4A 323788494 323789359 865 True 1171.000000 1171 91.50600 703 1555 1 chr4A.!!$R2 852
4 TraesCS4D01G168900 chr4A 323849592 323850131 539 True 302.000000 483 91.73350 143 582 2 chr4A.!!$R3 439

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
656 2318 0.103208 GAACGCTGTCCTGATCCGAT 59.897 55.0 0.0 0.0 0.0 4.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2293 6508 0.036306 CCGAACCAAACCTAGCCACT 59.964 55.0 0.0 0.0 0.0 4.0 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 8.268850 TCTTTCTAGGCATTTCAATAAGTGAC 57.731 34.615 0.00 0.00 35.39 3.67
31 32 8.103305 TCTTTCTAGGCATTTCAATAAGTGACT 58.897 33.333 0.00 0.00 42.81 3.41
32 33 9.383519 CTTTCTAGGCATTTCAATAAGTGACTA 57.616 33.333 0.00 0.00 38.81 2.59
33 34 8.718102 TTCTAGGCATTTCAATAAGTGACTAC 57.282 34.615 0.00 0.00 38.81 2.73
34 35 7.847096 TCTAGGCATTTCAATAAGTGACTACA 58.153 34.615 0.00 0.00 38.81 2.74
35 36 8.486210 TCTAGGCATTTCAATAAGTGACTACAT 58.514 33.333 0.00 0.00 38.81 2.29
36 37 9.764363 CTAGGCATTTCAATAAGTGACTACATA 57.236 33.333 0.00 0.00 38.81 2.29
37 38 8.438676 AGGCATTTCAATAAGTGACTACATAC 57.561 34.615 0.00 0.00 38.81 2.39
38 39 7.224753 AGGCATTTCAATAAGTGACTACATACG 59.775 37.037 0.00 0.00 38.81 3.06
39 40 7.223971 GGCATTTCAATAAGTGACTACATACGA 59.776 37.037 0.00 0.00 35.39 3.43
40 41 8.600625 GCATTTCAATAAGTGACTACATACGAA 58.399 33.333 0.00 0.00 35.39 3.85
42 43 9.871238 ATTTCAATAAGTGACTACATACGAAGT 57.129 29.630 0.00 0.00 39.84 3.01
61 62 8.240883 ACGAAGTAAAATGAGTGAATCTACAC 57.759 34.615 0.00 0.00 41.94 2.90
103 104 9.977762 CATACATCCGTATGTGATATTCATTTG 57.022 33.333 3.56 0.00 46.70 2.32
104 105 9.942850 ATACATCCGTATGTGATATTCATTTGA 57.057 29.630 3.56 0.00 45.99 2.69
105 106 8.675705 ACATCCGTATGTGATATTCATTTGAA 57.324 30.769 0.00 0.00 44.79 2.69
106 107 9.119418 ACATCCGTATGTGATATTCATTTGAAA 57.881 29.630 0.00 0.00 44.79 2.69
109 110 8.075574 TCCGTATGTGATATTCATTTGAAATGC 58.924 33.333 12.86 0.00 37.61 3.56
110 111 7.326789 CCGTATGTGATATTCATTTGAAATGCC 59.673 37.037 12.86 1.28 37.61 4.40
111 112 8.077991 CGTATGTGATATTCATTTGAAATGCCT 58.922 33.333 12.86 5.36 37.61 4.75
114 115 8.750515 TGTGATATTCATTTGAAATGCCTAGA 57.249 30.769 12.86 0.00 37.61 2.43
115 116 9.187996 TGTGATATTCATTTGAAATGCCTAGAA 57.812 29.630 12.86 2.59 37.61 2.10
121 122 8.954950 TTCATTTGAAATGCCTAGAAAAACAA 57.045 26.923 12.86 0.00 0.00 2.83
122 123 8.592105 TCATTTGAAATGCCTAGAAAAACAAG 57.408 30.769 12.86 0.00 0.00 3.16
123 124 8.203485 TCATTTGAAATGCCTAGAAAAACAAGT 58.797 29.630 12.86 0.00 0.00 3.16
124 125 9.474920 CATTTGAAATGCCTAGAAAAACAAGTA 57.525 29.630 4.82 0.00 0.00 2.24
131 132 9.528489 AATGCCTAGAAAAACAAGTATTTAGGA 57.472 29.630 0.00 0.00 0.00 2.94
132 133 8.927675 TGCCTAGAAAAACAAGTATTTAGGAA 57.072 30.769 0.00 0.00 0.00 3.36
133 134 8.789762 TGCCTAGAAAAACAAGTATTTAGGAAC 58.210 33.333 0.00 0.00 0.00 3.62
134 135 7.961283 GCCTAGAAAAACAAGTATTTAGGAACG 59.039 37.037 0.00 0.00 0.00 3.95
135 136 8.448615 CCTAGAAAAACAAGTATTTAGGAACGG 58.551 37.037 0.00 0.00 0.00 4.44
136 137 7.812690 AGAAAAACAAGTATTTAGGAACGGT 57.187 32.000 0.00 0.00 0.00 4.83
137 138 7.645402 AGAAAAACAAGTATTTAGGAACGGTG 58.355 34.615 0.00 0.00 0.00 4.94
138 139 5.952526 AAACAAGTATTTAGGAACGGTGG 57.047 39.130 0.00 0.00 0.00 4.61
139 140 3.946606 ACAAGTATTTAGGAACGGTGGG 58.053 45.455 0.00 0.00 0.00 4.61
140 141 3.583966 ACAAGTATTTAGGAACGGTGGGA 59.416 43.478 0.00 0.00 0.00 4.37
141 142 4.189231 CAAGTATTTAGGAACGGTGGGAG 58.811 47.826 0.00 0.00 0.00 4.30
152 153 2.100989 ACGGTGGGAGTAGATCTGAAC 58.899 52.381 5.18 0.00 0.00 3.18
169 170 3.902063 CTGCGTCGCCGATCGTTG 61.902 66.667 15.88 5.91 39.67 4.10
198 199 0.681733 ATTGTGTCGGCTCTGTCTGT 59.318 50.000 0.00 0.00 0.00 3.41
217 218 1.135344 GTCAGGCGAGAAGTGGTAGTC 60.135 57.143 0.00 0.00 0.00 2.59
358 359 0.804989 CAGCCGGTTCCTGAACAATC 59.195 55.000 1.90 0.64 42.85 2.67
536 2174 3.305897 CGCGTCATTGCTGTTTCATACTA 59.694 43.478 0.00 0.00 0.00 1.82
537 2175 4.578601 GCGTCATTGCTGTTTCATACTAC 58.421 43.478 0.00 0.00 0.00 2.73
538 2176 4.330074 GCGTCATTGCTGTTTCATACTACT 59.670 41.667 0.00 0.00 0.00 2.57
553 2191 7.130303 TCATACTACTCGTACATCTACATGC 57.870 40.000 0.00 0.00 32.57 4.06
584 2222 4.206609 GCGTTACTCCGAGAACATAATCAC 59.793 45.833 1.33 0.00 0.00 3.06
607 2245 2.159142 ACGACTATCCCGTGATCAAACC 60.159 50.000 0.00 0.00 38.97 3.27
608 2246 2.159156 CGACTATCCCGTGATCAAACCA 60.159 50.000 0.00 0.00 32.18 3.67
610 2248 4.258543 GACTATCCCGTGATCAAACCAAA 58.741 43.478 0.00 0.00 32.18 3.28
611 2249 4.007659 ACTATCCCGTGATCAAACCAAAC 58.992 43.478 0.00 0.00 32.18 2.93
612 2250 1.231221 TCCCGTGATCAAACCAAACG 58.769 50.000 0.00 0.00 0.00 3.60
615 2253 1.068610 CCGTGATCAAACCAAACGCAT 60.069 47.619 0.00 0.00 33.07 4.73
616 2254 2.160615 CCGTGATCAAACCAAACGCATA 59.839 45.455 0.00 0.00 33.07 3.14
617 2255 3.181501 CCGTGATCAAACCAAACGCATAT 60.182 43.478 0.00 0.00 33.07 1.78
618 2256 4.028383 CGTGATCAAACCAAACGCATATC 58.972 43.478 0.00 0.00 0.00 1.63
619 2257 4.436718 CGTGATCAAACCAAACGCATATCA 60.437 41.667 0.00 0.00 0.00 2.15
624 2286 3.350219 AACCAAACGCATATCACCTCT 57.650 42.857 0.00 0.00 0.00 3.69
627 2289 2.213499 CAAACGCATATCACCTCTCCC 58.787 52.381 0.00 0.00 0.00 4.30
632 2294 3.709653 ACGCATATCACCTCTCCCTTTTA 59.290 43.478 0.00 0.00 0.00 1.52
644 2306 4.817517 TCTCCCTTTTACTAAGAACGCTG 58.182 43.478 0.00 0.00 0.00 5.18
645 2307 4.282703 TCTCCCTTTTACTAAGAACGCTGT 59.717 41.667 0.00 0.00 0.00 4.40
646 2308 4.563061 TCCCTTTTACTAAGAACGCTGTC 58.437 43.478 0.00 0.00 0.00 3.51
647 2309 3.683340 CCCTTTTACTAAGAACGCTGTCC 59.317 47.826 0.00 0.00 0.00 4.02
648 2310 4.562963 CCCTTTTACTAAGAACGCTGTCCT 60.563 45.833 0.00 0.00 0.00 3.85
649 2311 4.389077 CCTTTTACTAAGAACGCTGTCCTG 59.611 45.833 0.00 0.00 0.00 3.86
650 2312 4.859304 TTTACTAAGAACGCTGTCCTGA 57.141 40.909 0.00 0.00 0.00 3.86
651 2313 5.401531 TTTACTAAGAACGCTGTCCTGAT 57.598 39.130 0.00 0.00 0.00 2.90
652 2314 3.512033 ACTAAGAACGCTGTCCTGATC 57.488 47.619 0.00 0.00 0.00 2.92
653 2315 2.166664 ACTAAGAACGCTGTCCTGATCC 59.833 50.000 0.00 0.00 0.00 3.36
654 2316 0.108615 AAGAACGCTGTCCTGATCCG 60.109 55.000 0.00 0.00 0.00 4.18
655 2317 0.965866 AGAACGCTGTCCTGATCCGA 60.966 55.000 0.00 0.00 0.00 4.55
656 2318 0.103208 GAACGCTGTCCTGATCCGAT 59.897 55.000 0.00 0.00 0.00 4.18
657 2319 0.179100 AACGCTGTCCTGATCCGATG 60.179 55.000 0.00 0.00 0.00 3.84
658 2320 1.037579 ACGCTGTCCTGATCCGATGA 61.038 55.000 0.00 0.00 0.00 2.92
659 2321 0.316522 CGCTGTCCTGATCCGATGAT 59.683 55.000 0.00 0.00 0.00 2.45
660 2322 1.668337 CGCTGTCCTGATCCGATGATC 60.668 57.143 0.00 0.00 46.37 2.92
686 2348 1.813513 AAAACGCTGTCCTGATCCTG 58.186 50.000 0.00 0.00 0.00 3.86
756 2418 0.931468 ACCCTAATAAAGCCCACCCC 59.069 55.000 0.00 0.00 0.00 4.95
814 2517 1.466167 CACCGCTTTCCTTCATGTGAG 59.534 52.381 0.00 0.00 0.00 3.51
847 2561 1.889170 TCACATGCCTATCTCCGCTAG 59.111 52.381 0.00 0.00 0.00 3.42
848 2562 0.605589 ACATGCCTATCTCCGCTAGC 59.394 55.000 4.06 4.06 0.00 3.42
849 2563 0.457509 CATGCCTATCTCCGCTAGCG 60.458 60.000 29.93 29.93 39.44 4.26
905 2619 0.387565 CTCGCTCTCTAAAGGCTCCC 59.612 60.000 0.00 0.00 0.00 4.30
915 2629 0.608640 AAAGGCTCCCGTACTCACTG 59.391 55.000 0.00 0.00 0.00 3.66
916 2630 1.258445 AAGGCTCCCGTACTCACTGG 61.258 60.000 0.00 0.00 0.00 4.00
917 2631 1.681327 GGCTCCCGTACTCACTGGA 60.681 63.158 0.00 0.00 35.86 3.86
918 2632 1.511768 GCTCCCGTACTCACTGGAC 59.488 63.158 0.00 0.00 33.52 4.02
919 2633 0.966370 GCTCCCGTACTCACTGGACT 60.966 60.000 0.00 0.00 33.52 3.85
961 2675 1.507141 CCTCGCACAATTATCGCCCC 61.507 60.000 0.00 0.00 0.00 5.80
962 2676 0.813610 CTCGCACAATTATCGCCCCA 60.814 55.000 0.00 0.00 0.00 4.96
963 2677 0.813610 TCGCACAATTATCGCCCCAG 60.814 55.000 0.00 0.00 0.00 4.45
964 2678 1.785041 CGCACAATTATCGCCCCAGG 61.785 60.000 0.00 0.00 0.00 4.45
965 2679 0.751643 GCACAATTATCGCCCCAGGT 60.752 55.000 0.00 0.00 0.00 4.00
966 2680 1.476110 GCACAATTATCGCCCCAGGTA 60.476 52.381 0.00 0.00 0.00 3.08
1466 3180 0.404040 CTGGGCCTGGGTGTAAAAGA 59.596 55.000 4.53 0.00 0.00 2.52
1484 3198 6.628919 AAAAGAGCGGTGTAAATTAACTGT 57.371 33.333 0.00 0.00 0.00 3.55
1556 3278 2.965805 CATGGGTCCATGTGCTTGT 58.034 52.632 19.04 0.00 46.20 3.16
1603 3325 2.257676 GTCTCGTCGGTGGTGTCC 59.742 66.667 0.00 0.00 0.00 4.02
1605 3327 1.970114 TCTCGTCGGTGGTGTCCTC 60.970 63.158 0.00 0.00 0.00 3.71
1633 3355 4.039488 TCTTTTGTTACTCCGCTAGAACCA 59.961 41.667 0.00 0.00 0.00 3.67
1637 3359 1.041447 TACTCCGCTAGAACCAGGCC 61.041 60.000 0.00 0.00 0.00 5.19
1638 3360 2.038975 TCCGCTAGAACCAGGCCT 59.961 61.111 0.00 0.00 0.00 5.19
1645 3367 2.418884 GCTAGAACCAGGCCTCAGTAAC 60.419 54.545 0.00 1.93 0.00 2.50
1646 3368 1.729586 AGAACCAGGCCTCAGTAACA 58.270 50.000 0.00 0.00 0.00 2.41
1647 3369 2.269940 AGAACCAGGCCTCAGTAACAT 58.730 47.619 0.00 0.00 0.00 2.71
1648 3370 2.644798 AGAACCAGGCCTCAGTAACATT 59.355 45.455 0.00 0.00 0.00 2.71
1649 3371 2.496899 ACCAGGCCTCAGTAACATTG 57.503 50.000 0.00 0.00 0.00 2.82
1650 3372 1.985159 ACCAGGCCTCAGTAACATTGA 59.015 47.619 0.00 0.00 0.00 2.57
1651 3373 2.026822 ACCAGGCCTCAGTAACATTGAG 60.027 50.000 0.00 0.00 41.34 3.02
1671 3393 9.722056 CATTGAGTAAATATAAAAGTGACAGCC 57.278 33.333 0.00 0.00 0.00 4.85
1683 3405 3.406764 AGTGACAGCCTGAGATCAAAAC 58.593 45.455 0.00 0.00 0.00 2.43
1686 3408 2.808543 GACAGCCTGAGATCAAAACGTT 59.191 45.455 0.00 0.00 0.00 3.99
1687 3409 2.808543 ACAGCCTGAGATCAAAACGTTC 59.191 45.455 0.00 0.00 0.00 3.95
1709 3432 0.816825 AGCCTTACGTATCGCTCGGA 60.817 55.000 10.29 0.00 0.00 4.55
1713 3436 2.545526 CCTTACGTATCGCTCGGAACTA 59.454 50.000 0.00 0.00 0.00 2.24
1718 3441 3.164358 CGTATCGCTCGGAACTATCATG 58.836 50.000 0.00 0.00 0.00 3.07
1763 3486 1.698506 TTGATTTGGTCGGTGCCTTT 58.301 45.000 0.00 0.00 0.00 3.11
1803 3526 1.585006 CAACTGCCTCGTACCGTCT 59.415 57.895 0.00 0.00 0.00 4.18
1808 3531 0.321919 TGCCTCGTACCGTCTAGTGT 60.322 55.000 0.00 0.00 0.00 3.55
1809 3532 1.066215 TGCCTCGTACCGTCTAGTGTA 60.066 52.381 0.00 0.00 0.00 2.90
1810 3533 1.328986 GCCTCGTACCGTCTAGTGTAC 59.671 57.143 8.81 8.81 35.18 2.90
1814 3537 3.782046 TCGTACCGTCTAGTGTACTACC 58.218 50.000 13.86 0.00 36.13 3.18
1842 3565 2.211250 AAGCTCATGCATGGTGTTCT 57.789 45.000 25.97 12.73 42.74 3.01
1843 3566 1.460504 AGCTCATGCATGGTGTTCTG 58.539 50.000 25.97 9.10 42.74 3.02
1844 3567 0.179145 GCTCATGCATGGTGTTCTGC 60.179 55.000 25.97 14.28 39.41 4.26
1845 3568 1.460504 CTCATGCATGGTGTTCTGCT 58.539 50.000 25.97 0.00 39.16 4.24
1846 3569 1.816835 CTCATGCATGGTGTTCTGCTT 59.183 47.619 25.97 0.00 39.16 3.91
1847 3570 2.230508 CTCATGCATGGTGTTCTGCTTT 59.769 45.455 25.97 0.00 39.16 3.51
1848 3571 2.629137 TCATGCATGGTGTTCTGCTTTT 59.371 40.909 25.97 0.00 39.16 2.27
1849 3572 3.069872 TCATGCATGGTGTTCTGCTTTTT 59.930 39.130 25.97 0.00 39.16 1.94
1868 3591 5.948742 TTTTTCTTTTTGAGGGTCATGGT 57.051 34.783 0.00 0.00 0.00 3.55
1869 3592 4.935352 TTTCTTTTTGAGGGTCATGGTG 57.065 40.909 0.00 0.00 0.00 4.17
1870 3593 3.593442 TCTTTTTGAGGGTCATGGTGT 57.407 42.857 0.00 0.00 0.00 4.16
1871 3594 3.909732 TCTTTTTGAGGGTCATGGTGTT 58.090 40.909 0.00 0.00 0.00 3.32
1872 3595 3.888930 TCTTTTTGAGGGTCATGGTGTTC 59.111 43.478 0.00 0.00 0.00 3.18
1873 3596 3.593442 TTTTGAGGGTCATGGTGTTCT 57.407 42.857 0.00 0.00 0.00 3.01
1894 3617 4.122776 CTGCTGATAGTAGCCGAAAACAT 58.877 43.478 0.00 0.00 43.02 2.71
1951 3674 3.599730 AAAGGCTAATTTCAAGGCAGC 57.400 42.857 3.41 0.00 41.75 5.25
1970 3693 3.743396 CAGCTTGACGGAGATATTTAGCC 59.257 47.826 0.00 0.00 0.00 3.93
1996 6211 5.107220 CCAAATCCGTGTACTAACAAGTGAC 60.107 44.000 0.00 0.00 37.36 3.67
2007 6222 8.248253 TGTACTAACAAGTGACGATACATTCAT 58.752 33.333 0.00 0.00 30.91 2.57
2012 6227 6.273825 ACAAGTGACGATACATTCATCCTAC 58.726 40.000 0.00 0.00 0.00 3.18
2014 6229 3.669122 GTGACGATACATTCATCCTACGC 59.331 47.826 0.00 0.00 0.00 4.42
2018 6233 3.670523 CGATACATTCATCCTACGCACAG 59.329 47.826 0.00 0.00 0.00 3.66
2025 6240 0.736325 ATCCTACGCACAGCACGAAC 60.736 55.000 0.00 0.00 0.00 3.95
2031 6246 3.011760 GCACAGCACGAACGTAGGC 62.012 63.158 0.00 0.60 0.00 3.93
2046 6261 1.804748 GTAGGCGTAACTTTGCTTGCT 59.195 47.619 0.00 0.00 0.00 3.91
2076 6291 5.929992 TGGTTCCTCTTTACATGTAGAAACG 59.070 40.000 5.56 0.00 0.00 3.60
2084 6299 3.619233 ACATGTAGAAACGCGCTTTTT 57.381 38.095 13.49 8.42 0.00 1.94
2085 6300 4.735662 ACATGTAGAAACGCGCTTTTTA 57.264 36.364 13.49 6.00 0.00 1.52
2086 6301 5.291293 ACATGTAGAAACGCGCTTTTTAT 57.709 34.783 13.49 8.34 0.00 1.40
2087 6302 5.321516 ACATGTAGAAACGCGCTTTTTATC 58.678 37.500 13.49 0.96 0.00 1.75
2088 6303 5.121768 ACATGTAGAAACGCGCTTTTTATCT 59.878 36.000 13.49 8.73 0.00 1.98
2089 6304 5.199424 TGTAGAAACGCGCTTTTTATCTC 57.801 39.130 13.49 0.21 0.00 2.75
2090 6305 4.687018 TGTAGAAACGCGCTTTTTATCTCA 59.313 37.500 13.49 6.48 0.00 3.27
2091 6306 4.742438 AGAAACGCGCTTTTTATCTCAA 57.258 36.364 13.49 0.00 0.00 3.02
2092 6307 5.103290 AGAAACGCGCTTTTTATCTCAAA 57.897 34.783 13.49 0.00 0.00 2.69
2093 6308 5.516090 AGAAACGCGCTTTTTATCTCAAAA 58.484 33.333 13.49 0.00 0.00 2.44
2094 6309 5.974751 AGAAACGCGCTTTTTATCTCAAAAA 59.025 32.000 13.49 0.00 0.00 1.94
2112 6327 4.499037 AAAAATAAGGAACGCGCTTTCT 57.501 36.364 23.68 10.14 0.00 2.52
2113 6328 3.741805 AAATAAGGAACGCGCTTTCTC 57.258 42.857 23.68 14.79 0.00 2.87
2114 6329 2.674796 ATAAGGAACGCGCTTTCTCT 57.325 45.000 23.68 16.56 0.00 3.10
2115 6330 1.710013 TAAGGAACGCGCTTTCTCTG 58.290 50.000 23.68 0.41 0.00 3.35
2116 6331 0.249911 AAGGAACGCGCTTTCTCTGT 60.250 50.000 23.68 1.09 0.00 3.41
2117 6332 0.601558 AGGAACGCGCTTTCTCTGTA 59.398 50.000 23.68 0.00 0.00 2.74
2118 6333 1.204941 AGGAACGCGCTTTCTCTGTAT 59.795 47.619 23.68 3.56 0.00 2.29
2119 6334 2.000447 GGAACGCGCTTTCTCTGTATT 59.000 47.619 23.68 0.00 0.00 1.89
2120 6335 2.029365 GGAACGCGCTTTCTCTGTATTC 59.971 50.000 23.68 3.42 0.00 1.75
2121 6336 2.656560 ACGCGCTTTCTCTGTATTCT 57.343 45.000 5.73 0.00 0.00 2.40
2122 6337 2.263077 ACGCGCTTTCTCTGTATTCTG 58.737 47.619 5.73 0.00 0.00 3.02
2123 6338 2.263077 CGCGCTTTCTCTGTATTCTGT 58.737 47.619 5.56 0.00 0.00 3.41
2124 6339 2.028523 CGCGCTTTCTCTGTATTCTGTG 59.971 50.000 5.56 0.00 0.00 3.66
2125 6340 2.996621 GCGCTTTCTCTGTATTCTGTGT 59.003 45.455 0.00 0.00 0.00 3.72
2126 6341 4.174009 GCGCTTTCTCTGTATTCTGTGTA 58.826 43.478 0.00 0.00 0.00 2.90
2127 6342 4.806247 GCGCTTTCTCTGTATTCTGTGTAT 59.194 41.667 0.00 0.00 0.00 2.29
2128 6343 5.292101 GCGCTTTCTCTGTATTCTGTGTATT 59.708 40.000 0.00 0.00 0.00 1.89
2129 6344 6.700020 CGCTTTCTCTGTATTCTGTGTATTG 58.300 40.000 0.00 0.00 0.00 1.90
2130 6345 6.481984 GCTTTCTCTGTATTCTGTGTATTGC 58.518 40.000 0.00 0.00 0.00 3.56
2131 6346 6.092670 GCTTTCTCTGTATTCTGTGTATTGCA 59.907 38.462 0.00 0.00 0.00 4.08
2139 6354 2.045340 GTGTATTGCACCGGGGCT 60.045 61.111 32.18 13.90 42.10 5.19
2140 6355 1.677633 GTGTATTGCACCGGGGCTT 60.678 57.895 32.18 20.00 42.10 4.35
2141 6356 1.677300 TGTATTGCACCGGGGCTTG 60.677 57.895 32.18 8.01 34.04 4.01
2142 6357 1.377987 GTATTGCACCGGGGCTTGA 60.378 57.895 32.18 16.56 34.04 3.02
2143 6358 1.377987 TATTGCACCGGGGCTTGAC 60.378 57.895 32.18 0.00 34.04 3.18
2144 6359 2.130821 TATTGCACCGGGGCTTGACA 62.131 55.000 32.18 5.72 34.04 3.58
2145 6360 2.992817 ATTGCACCGGGGCTTGACAA 62.993 55.000 32.18 16.32 34.04 3.18
2146 6361 3.365265 GCACCGGGGCTTGACAAG 61.365 66.667 24.98 11.02 0.00 3.16
2147 6362 2.113139 CACCGGGGCTTGACAAGT 59.887 61.111 16.39 0.00 0.00 3.16
2148 6363 2.113139 ACCGGGGCTTGACAAGTG 59.887 61.111 16.39 4.81 0.00 3.16
2149 6364 2.113139 CCGGGGCTTGACAAGTGT 59.887 61.111 16.39 0.00 0.00 3.55
2150 6365 1.966451 CCGGGGCTTGACAAGTGTC 60.966 63.158 16.39 4.43 44.97 3.67
2151 6366 1.071471 CGGGGCTTGACAAGTGTCT 59.929 57.895 16.39 0.00 44.99 3.41
2152 6367 0.535102 CGGGGCTTGACAAGTGTCTT 60.535 55.000 16.39 0.00 44.99 3.01
2153 6368 1.692411 GGGGCTTGACAAGTGTCTTT 58.308 50.000 16.39 0.00 44.99 2.52
2154 6369 2.031870 GGGGCTTGACAAGTGTCTTTT 58.968 47.619 16.39 0.00 44.99 2.27
2155 6370 3.219281 GGGGCTTGACAAGTGTCTTTTA 58.781 45.455 16.39 0.00 44.99 1.52
2156 6371 3.826729 GGGGCTTGACAAGTGTCTTTTAT 59.173 43.478 16.39 0.00 44.99 1.40
2157 6372 4.280929 GGGGCTTGACAAGTGTCTTTTATT 59.719 41.667 16.39 0.00 44.99 1.40
2158 6373 5.221441 GGGGCTTGACAAGTGTCTTTTATTT 60.221 40.000 16.39 0.00 44.99 1.40
2159 6374 5.920840 GGGCTTGACAAGTGTCTTTTATTTC 59.079 40.000 16.39 0.00 44.99 2.17
2160 6375 5.920840 GGCTTGACAAGTGTCTTTTATTTCC 59.079 40.000 16.39 1.06 44.99 3.13
2161 6376 6.239036 GGCTTGACAAGTGTCTTTTATTTCCT 60.239 38.462 16.39 0.00 44.99 3.36
2162 6377 6.638468 GCTTGACAAGTGTCTTTTATTTCCTG 59.362 38.462 16.39 0.00 44.99 3.86
2163 6378 6.072112 TGACAAGTGTCTTTTATTTCCTGC 57.928 37.500 12.43 0.00 44.99 4.85
2164 6379 5.592282 TGACAAGTGTCTTTTATTTCCTGCA 59.408 36.000 12.43 0.00 44.99 4.41
2165 6380 6.096141 TGACAAGTGTCTTTTATTTCCTGCAA 59.904 34.615 12.43 0.00 44.99 4.08
2166 6381 7.054491 ACAAGTGTCTTTTATTTCCTGCAAT 57.946 32.000 0.00 0.00 0.00 3.56
2167 6382 7.147976 ACAAGTGTCTTTTATTTCCTGCAATC 58.852 34.615 0.00 0.00 0.00 2.67
2168 6383 6.899393 AGTGTCTTTTATTTCCTGCAATCA 57.101 33.333 0.00 0.00 0.00 2.57
2169 6384 6.681777 AGTGTCTTTTATTTCCTGCAATCAC 58.318 36.000 0.00 0.00 0.00 3.06
2170 6385 5.863935 GTGTCTTTTATTTCCTGCAATCACC 59.136 40.000 0.00 0.00 0.00 4.02
2171 6386 5.047377 TGTCTTTTATTTCCTGCAATCACCC 60.047 40.000 0.00 0.00 0.00 4.61
2172 6387 4.157656 TCTTTTATTTCCTGCAATCACCCG 59.842 41.667 0.00 0.00 0.00 5.28
2173 6388 2.051334 TATTTCCTGCAATCACCCGG 57.949 50.000 0.00 0.00 0.00 5.73
2174 6389 0.331278 ATTTCCTGCAATCACCCGGA 59.669 50.000 0.73 0.00 0.00 5.14
2175 6390 0.608035 TTTCCTGCAATCACCCGGAC 60.608 55.000 0.73 0.00 0.00 4.79
2176 6391 2.796483 TTCCTGCAATCACCCGGACG 62.796 60.000 0.73 0.00 0.00 4.79
2177 6392 2.264480 CTGCAATCACCCGGACGA 59.736 61.111 0.73 0.00 0.00 4.20
2178 6393 1.375396 CTGCAATCACCCGGACGAA 60.375 57.895 0.73 0.00 0.00 3.85
2179 6394 1.635663 CTGCAATCACCCGGACGAAC 61.636 60.000 0.73 0.00 0.00 3.95
2180 6395 1.669760 GCAATCACCCGGACGAACA 60.670 57.895 0.73 0.00 0.00 3.18
2181 6396 1.635663 GCAATCACCCGGACGAACAG 61.636 60.000 0.73 0.00 0.00 3.16
2182 6397 0.320421 CAATCACCCGGACGAACAGT 60.320 55.000 0.73 0.00 0.00 3.55
2194 6409 4.327854 GACGAACAGTCCATTCATTGAC 57.672 45.455 0.00 0.00 43.95 3.18
2195 6410 3.074412 ACGAACAGTCCATTCATTGACC 58.926 45.455 0.00 0.00 31.76 4.02
2196 6411 3.244561 ACGAACAGTCCATTCATTGACCT 60.245 43.478 0.00 0.00 31.76 3.85
2197 6412 3.125829 CGAACAGTCCATTCATTGACCTG 59.874 47.826 0.00 0.00 31.76 4.00
2198 6413 4.326826 GAACAGTCCATTCATTGACCTGA 58.673 43.478 0.00 0.00 31.76 3.86
2199 6414 4.371624 ACAGTCCATTCATTGACCTGAA 57.628 40.909 0.00 0.00 39.35 3.02
2200 6415 4.728772 ACAGTCCATTCATTGACCTGAAA 58.271 39.130 0.00 0.00 38.55 2.69
2201 6416 5.139727 ACAGTCCATTCATTGACCTGAAAA 58.860 37.500 0.00 0.00 38.55 2.29
2202 6417 5.598005 ACAGTCCATTCATTGACCTGAAAAA 59.402 36.000 0.00 0.00 38.55 1.94
2231 6446 3.379445 GAGGGCGACTCACCGGAA 61.379 66.667 9.46 0.00 45.85 4.30
2232 6447 3.644399 GAGGGCGACTCACCGGAAC 62.644 68.421 9.46 0.00 45.85 3.62
2233 6448 4.754667 GGGCGACTCACCGGAACC 62.755 72.222 9.46 0.00 0.00 3.62
2234 6449 4.754667 GGCGACTCACCGGAACCC 62.755 72.222 9.46 0.00 0.00 4.11
2235 6450 3.692406 GCGACTCACCGGAACCCT 61.692 66.667 9.46 0.00 0.00 4.34
2236 6451 3.057337 CGACTCACCGGAACCCTT 58.943 61.111 9.46 0.00 0.00 3.95
2237 6452 1.080025 CGACTCACCGGAACCCTTC 60.080 63.158 9.46 0.00 0.00 3.46
2238 6453 1.533469 CGACTCACCGGAACCCTTCT 61.533 60.000 9.46 0.00 0.00 2.85
2239 6454 0.685660 GACTCACCGGAACCCTTCTT 59.314 55.000 9.46 0.00 0.00 2.52
2240 6455 1.897802 GACTCACCGGAACCCTTCTTA 59.102 52.381 9.46 0.00 0.00 2.10
2241 6456 2.500504 GACTCACCGGAACCCTTCTTAT 59.499 50.000 9.46 0.00 0.00 1.73
2242 6457 2.500504 ACTCACCGGAACCCTTCTTATC 59.499 50.000 9.46 0.00 0.00 1.75
2243 6458 1.835531 TCACCGGAACCCTTCTTATCC 59.164 52.381 9.46 0.00 0.00 2.59
2244 6459 1.557832 CACCGGAACCCTTCTTATCCA 59.442 52.381 9.46 0.00 32.08 3.41
2245 6460 1.838077 ACCGGAACCCTTCTTATCCAG 59.162 52.381 9.46 0.00 32.08 3.86
2246 6461 1.475213 CCGGAACCCTTCTTATCCAGC 60.475 57.143 0.00 0.00 32.08 4.85
2247 6462 1.475213 CGGAACCCTTCTTATCCAGCC 60.475 57.143 0.00 0.00 32.08 4.85
2248 6463 1.133761 GGAACCCTTCTTATCCAGCCC 60.134 57.143 0.00 0.00 32.08 5.19
2249 6464 1.564348 GAACCCTTCTTATCCAGCCCA 59.436 52.381 0.00 0.00 0.00 5.36
2250 6465 1.681229 ACCCTTCTTATCCAGCCCAA 58.319 50.000 0.00 0.00 0.00 4.12
2251 6466 2.000048 ACCCTTCTTATCCAGCCCAAA 59.000 47.619 0.00 0.00 0.00 3.28
2252 6467 2.587307 ACCCTTCTTATCCAGCCCAAAT 59.413 45.455 0.00 0.00 0.00 2.32
2253 6468 3.791545 ACCCTTCTTATCCAGCCCAAATA 59.208 43.478 0.00 0.00 0.00 1.40
2254 6469 4.420214 ACCCTTCTTATCCAGCCCAAATAT 59.580 41.667 0.00 0.00 0.00 1.28
2255 6470 5.615261 ACCCTTCTTATCCAGCCCAAATATA 59.385 40.000 0.00 0.00 0.00 0.86
2256 6471 6.104094 ACCCTTCTTATCCAGCCCAAATATAA 59.896 38.462 0.00 0.00 0.00 0.98
2257 6472 7.010160 CCCTTCTTATCCAGCCCAAATATAAA 58.990 38.462 0.00 0.00 0.00 1.40
2258 6473 7.508977 CCCTTCTTATCCAGCCCAAATATAAAA 59.491 37.037 0.00 0.00 0.00 1.52
2259 6474 8.360390 CCTTCTTATCCAGCCCAAATATAAAAC 58.640 37.037 0.00 0.00 0.00 2.43
2260 6475 7.504924 TCTTATCCAGCCCAAATATAAAACG 57.495 36.000 0.00 0.00 0.00 3.60
2261 6476 6.488683 TCTTATCCAGCCCAAATATAAAACGG 59.511 38.462 0.00 0.00 0.00 4.44
2262 6477 4.237976 TCCAGCCCAAATATAAAACGGA 57.762 40.909 0.00 0.00 0.00 4.69
2263 6478 4.798882 TCCAGCCCAAATATAAAACGGAT 58.201 39.130 0.00 0.00 0.00 4.18
2264 6479 5.942961 TCCAGCCCAAATATAAAACGGATA 58.057 37.500 0.00 0.00 0.00 2.59
2265 6480 6.366340 TCCAGCCCAAATATAAAACGGATAA 58.634 36.000 0.00 0.00 0.00 1.75
2266 6481 6.488683 TCCAGCCCAAATATAAAACGGATAAG 59.511 38.462 0.00 0.00 0.00 1.73
2267 6482 6.149633 CAGCCCAAATATAAAACGGATAAGC 58.850 40.000 0.00 0.00 0.00 3.09
2268 6483 6.016276 CAGCCCAAATATAAAACGGATAAGCT 60.016 38.462 0.00 0.00 0.00 3.74
2269 6484 6.549736 AGCCCAAATATAAAACGGATAAGCTT 59.450 34.615 3.48 3.48 0.00 3.74
2270 6485 6.640907 GCCCAAATATAAAACGGATAAGCTTG 59.359 38.462 9.86 0.00 0.00 4.01
2271 6486 7.145323 CCCAAATATAAAACGGATAAGCTTGG 58.855 38.462 9.86 0.00 0.00 3.61
2272 6487 7.145323 CCAAATATAAAACGGATAAGCTTGGG 58.855 38.462 9.86 0.00 0.00 4.12
2273 6488 7.201875 CCAAATATAAAACGGATAAGCTTGGGT 60.202 37.037 9.86 0.00 0.00 4.51
2274 6489 6.877611 ATATAAAACGGATAAGCTTGGGTG 57.122 37.500 9.86 0.00 0.00 4.61
2275 6490 1.834188 AAACGGATAAGCTTGGGTGG 58.166 50.000 9.86 0.00 0.00 4.61
2276 6491 0.679960 AACGGATAAGCTTGGGTGGC 60.680 55.000 9.86 0.00 0.00 5.01
2277 6492 2.180204 CGGATAAGCTTGGGTGGCG 61.180 63.158 9.86 0.00 34.52 5.69
2278 6493 1.223487 GGATAAGCTTGGGTGGCGA 59.777 57.895 9.86 0.00 34.52 5.54
2279 6494 0.815615 GGATAAGCTTGGGTGGCGAG 60.816 60.000 9.86 0.00 34.52 5.03
2280 6495 0.815615 GATAAGCTTGGGTGGCGAGG 60.816 60.000 9.86 0.00 34.52 4.63
2281 6496 2.270874 ATAAGCTTGGGTGGCGAGGG 62.271 60.000 9.86 0.00 34.52 4.30
2284 6499 4.101448 CTTGGGTGGCGAGGGGAG 62.101 72.222 0.00 0.00 0.00 4.30
2285 6500 4.974438 TTGGGTGGCGAGGGGAGT 62.974 66.667 0.00 0.00 0.00 3.85
2288 6503 3.319198 GGTGGCGAGGGGAGTGAA 61.319 66.667 0.00 0.00 0.00 3.18
2289 6504 2.266055 GTGGCGAGGGGAGTGAAG 59.734 66.667 0.00 0.00 0.00 3.02
2290 6505 2.203788 TGGCGAGGGGAGTGAAGT 60.204 61.111 0.00 0.00 0.00 3.01
2291 6506 2.266055 GGCGAGGGGAGTGAAGTG 59.734 66.667 0.00 0.00 0.00 3.16
2292 6507 2.283529 GGCGAGGGGAGTGAAGTGA 61.284 63.158 0.00 0.00 0.00 3.41
2293 6508 1.671742 GCGAGGGGAGTGAAGTGAA 59.328 57.895 0.00 0.00 0.00 3.18
2294 6509 0.390472 GCGAGGGGAGTGAAGTGAAG 60.390 60.000 0.00 0.00 0.00 3.02
2295 6510 0.969894 CGAGGGGAGTGAAGTGAAGT 59.030 55.000 0.00 0.00 0.00 3.01
2296 6511 1.337260 CGAGGGGAGTGAAGTGAAGTG 60.337 57.143 0.00 0.00 0.00 3.16
2297 6512 1.002544 GAGGGGAGTGAAGTGAAGTGG 59.997 57.143 0.00 0.00 0.00 4.00
2298 6513 0.606673 GGGGAGTGAAGTGAAGTGGC 60.607 60.000 0.00 0.00 0.00 5.01
2299 6514 0.398318 GGGAGTGAAGTGAAGTGGCT 59.602 55.000 0.00 0.00 0.00 4.75
2300 6515 1.623811 GGGAGTGAAGTGAAGTGGCTA 59.376 52.381 0.00 0.00 0.00 3.93
2301 6516 2.354203 GGGAGTGAAGTGAAGTGGCTAG 60.354 54.545 0.00 0.00 0.00 3.42
2302 6517 2.354203 GGAGTGAAGTGAAGTGGCTAGG 60.354 54.545 0.00 0.00 0.00 3.02
2303 6518 2.300437 GAGTGAAGTGAAGTGGCTAGGT 59.700 50.000 0.00 0.00 0.00 3.08
2304 6519 2.706190 AGTGAAGTGAAGTGGCTAGGTT 59.294 45.455 0.00 0.00 0.00 3.50
2305 6520 3.136626 AGTGAAGTGAAGTGGCTAGGTTT 59.863 43.478 0.00 0.00 0.00 3.27
2306 6521 3.251004 GTGAAGTGAAGTGGCTAGGTTTG 59.749 47.826 0.00 0.00 0.00 2.93
2307 6522 2.568623 AGTGAAGTGGCTAGGTTTGG 57.431 50.000 0.00 0.00 0.00 3.28
2308 6523 1.774856 AGTGAAGTGGCTAGGTTTGGT 59.225 47.619 0.00 0.00 0.00 3.67
2309 6524 2.174854 AGTGAAGTGGCTAGGTTTGGTT 59.825 45.455 0.00 0.00 0.00 3.67
2310 6525 2.552743 GTGAAGTGGCTAGGTTTGGTTC 59.447 50.000 0.00 0.00 0.00 3.62
2311 6526 1.804748 GAAGTGGCTAGGTTTGGTTCG 59.195 52.381 0.00 0.00 0.00 3.95
2312 6527 0.036306 AGTGGCTAGGTTTGGTTCGG 59.964 55.000 0.00 0.00 0.00 4.30
2313 6528 0.958876 GTGGCTAGGTTTGGTTCGGG 60.959 60.000 0.00 0.00 0.00 5.14
2314 6529 1.128809 TGGCTAGGTTTGGTTCGGGA 61.129 55.000 0.00 0.00 0.00 5.14
2315 6530 0.392595 GGCTAGGTTTGGTTCGGGAG 60.393 60.000 0.00 0.00 0.00 4.30
2316 6531 0.323957 GCTAGGTTTGGTTCGGGAGT 59.676 55.000 0.00 0.00 0.00 3.85
2317 6532 1.944430 GCTAGGTTTGGTTCGGGAGTG 60.944 57.143 0.00 0.00 0.00 3.51
2318 6533 0.688487 TAGGTTTGGTTCGGGAGTGG 59.312 55.000 0.00 0.00 0.00 4.00
2319 6534 1.057851 AGGTTTGGTTCGGGAGTGGA 61.058 55.000 0.00 0.00 0.00 4.02
2320 6535 0.037734 GGTTTGGTTCGGGAGTGGAT 59.962 55.000 0.00 0.00 0.00 3.41
2321 6536 1.165270 GTTTGGTTCGGGAGTGGATG 58.835 55.000 0.00 0.00 0.00 3.51
2322 6537 1.060729 TTTGGTTCGGGAGTGGATGA 58.939 50.000 0.00 0.00 0.00 2.92
2323 6538 0.613260 TTGGTTCGGGAGTGGATGAG 59.387 55.000 0.00 0.00 0.00 2.90
2324 6539 0.252057 TGGTTCGGGAGTGGATGAGA 60.252 55.000 0.00 0.00 0.00 3.27
2325 6540 0.902531 GGTTCGGGAGTGGATGAGAA 59.097 55.000 0.00 0.00 0.00 2.87
2326 6541 1.134670 GGTTCGGGAGTGGATGAGAAG 60.135 57.143 0.00 0.00 0.00 2.85
2327 6542 1.134670 GTTCGGGAGTGGATGAGAAGG 60.135 57.143 0.00 0.00 0.00 3.46
2328 6543 0.335019 TCGGGAGTGGATGAGAAGGA 59.665 55.000 0.00 0.00 0.00 3.36
2329 6544 0.461961 CGGGAGTGGATGAGAAGGAC 59.538 60.000 0.00 0.00 0.00 3.85
2330 6545 1.872773 GGGAGTGGATGAGAAGGACT 58.127 55.000 0.00 0.00 0.00 3.85
2331 6546 2.687014 CGGGAGTGGATGAGAAGGACTA 60.687 54.545 0.00 0.00 0.00 2.59
2332 6547 3.582164 GGGAGTGGATGAGAAGGACTAT 58.418 50.000 0.00 0.00 0.00 2.12
2333 6548 4.742012 GGGAGTGGATGAGAAGGACTATA 58.258 47.826 0.00 0.00 0.00 1.31
2334 6549 4.770010 GGGAGTGGATGAGAAGGACTATAG 59.230 50.000 0.00 0.00 0.00 1.31
2335 6550 4.770010 GGAGTGGATGAGAAGGACTATAGG 59.230 50.000 4.43 0.00 0.00 2.57
2336 6551 5.458362 GGAGTGGATGAGAAGGACTATAGGA 60.458 48.000 4.43 0.00 0.00 2.94
2337 6552 6.226272 AGTGGATGAGAAGGACTATAGGAT 57.774 41.667 4.43 0.00 0.00 3.24
2338 6553 6.015918 AGTGGATGAGAAGGACTATAGGATG 58.984 44.000 4.43 0.00 0.00 3.51
2339 6554 5.186797 GTGGATGAGAAGGACTATAGGATGG 59.813 48.000 4.43 0.00 0.00 3.51
2340 6555 4.714308 GGATGAGAAGGACTATAGGATGGG 59.286 50.000 4.43 0.00 0.00 4.00
2341 6556 3.511477 TGAGAAGGACTATAGGATGGGC 58.489 50.000 4.43 0.00 0.00 5.36
2342 6557 2.835156 GAGAAGGACTATAGGATGGGCC 59.165 54.545 4.43 0.00 39.69 5.80
2343 6558 2.182312 AGAAGGACTATAGGATGGGCCA 59.818 50.000 9.61 9.61 42.38 5.36
2344 6559 3.181390 AGAAGGACTATAGGATGGGCCAT 60.181 47.826 21.39 21.39 42.38 4.40
2345 6560 3.297994 AGGACTATAGGATGGGCCATT 57.702 47.619 22.20 8.35 42.38 3.16
2346 6561 2.915604 AGGACTATAGGATGGGCCATTG 59.084 50.000 22.20 9.35 42.38 2.82
2347 6562 2.619074 GGACTATAGGATGGGCCATTGC 60.619 54.545 22.20 8.70 39.10 3.56
2348 6563 1.003580 ACTATAGGATGGGCCATTGCG 59.996 52.381 22.20 8.80 40.02 4.85
2349 6564 0.327924 TATAGGATGGGCCATTGCGG 59.672 55.000 22.20 0.00 40.02 5.69
2350 6565 2.430704 ATAGGATGGGCCATTGCGGG 62.431 60.000 22.20 0.00 40.02 6.13
2370 6585 4.754667 GGGGACGACTTGGCGGAC 62.755 72.222 0.00 0.00 35.12 4.79
2383 6598 4.814294 CGGACGCCTAGGCACACC 62.814 72.222 32.47 26.97 42.06 4.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 8.897752 GTCACTTATTGAAATGCCTAGAAAGAT 58.102 33.333 0.00 0.00 35.39 2.40
5 6 8.103305 AGTCACTTATTGAAATGCCTAGAAAGA 58.897 33.333 0.00 0.00 35.39 2.52
6 7 8.273780 AGTCACTTATTGAAATGCCTAGAAAG 57.726 34.615 0.00 0.00 35.39 2.62
7 8 9.162764 GTAGTCACTTATTGAAATGCCTAGAAA 57.837 33.333 0.00 0.00 35.39 2.52
8 9 8.318412 TGTAGTCACTTATTGAAATGCCTAGAA 58.682 33.333 0.00 0.00 35.39 2.10
9 10 7.847096 TGTAGTCACTTATTGAAATGCCTAGA 58.153 34.615 0.00 0.00 35.39 2.43
10 11 8.668510 ATGTAGTCACTTATTGAAATGCCTAG 57.331 34.615 0.00 0.00 35.39 3.02
11 12 9.542462 GTATGTAGTCACTTATTGAAATGCCTA 57.458 33.333 0.00 0.00 35.39 3.93
12 13 7.224753 CGTATGTAGTCACTTATTGAAATGCCT 59.775 37.037 0.00 0.00 35.39 4.75
13 14 7.223971 TCGTATGTAGTCACTTATTGAAATGCC 59.776 37.037 0.00 0.00 35.39 4.40
14 15 8.126871 TCGTATGTAGTCACTTATTGAAATGC 57.873 34.615 0.00 0.00 35.39 3.56
16 17 9.871238 ACTTCGTATGTAGTCACTTATTGAAAT 57.129 29.630 0.00 0.00 35.39 2.17
24 25 9.355215 CTCATTTTACTTCGTATGTAGTCACTT 57.645 33.333 0.00 0.00 0.00 3.16
25 26 8.521176 ACTCATTTTACTTCGTATGTAGTCACT 58.479 33.333 0.00 0.00 0.00 3.41
26 27 8.584600 CACTCATTTTACTTCGTATGTAGTCAC 58.415 37.037 0.00 0.00 0.00 3.67
27 28 8.517056 TCACTCATTTTACTTCGTATGTAGTCA 58.483 33.333 0.00 0.00 0.00 3.41
28 29 8.906636 TCACTCATTTTACTTCGTATGTAGTC 57.093 34.615 0.00 0.00 0.00 2.59
29 30 9.871238 ATTCACTCATTTTACTTCGTATGTAGT 57.129 29.630 0.00 0.00 0.00 2.73
35 36 9.350357 GTGTAGATTCACTCATTTTACTTCGTA 57.650 33.333 0.00 0.00 35.68 3.43
36 37 8.088981 AGTGTAGATTCACTCATTTTACTTCGT 58.911 33.333 0.00 0.00 44.07 3.85
37 38 8.467402 AGTGTAGATTCACTCATTTTACTTCG 57.533 34.615 0.00 0.00 44.07 3.79
78 79 9.942850 TCAAATGAATATCACATACGGATGTAT 57.057 29.630 14.23 10.02 44.82 2.29
79 80 9.771534 TTCAAATGAATATCACATACGGATGTA 57.228 29.630 14.23 0.00 44.82 2.29
80 81 9.119418 TTTCAAATGAATATCACATACGGATGT 57.881 29.630 7.68 7.68 39.20 3.06
83 84 8.075574 GCATTTCAAATGAATATCACATACGGA 58.924 33.333 14.65 0.00 33.54 4.69
84 85 7.326789 GGCATTTCAAATGAATATCACATACGG 59.673 37.037 14.65 0.00 33.54 4.02
85 86 8.077991 AGGCATTTCAAATGAATATCACATACG 58.922 33.333 14.65 0.00 33.54 3.06
88 89 9.358406 TCTAGGCATTTCAAATGAATATCACAT 57.642 29.630 14.65 0.00 33.54 3.21
89 90 8.750515 TCTAGGCATTTCAAATGAATATCACA 57.249 30.769 14.65 0.00 33.54 3.58
95 96 9.558396 TTGTTTTTCTAGGCATTTCAAATGAAT 57.442 25.926 14.65 3.70 33.54 2.57
96 97 8.954950 TTGTTTTTCTAGGCATTTCAAATGAA 57.045 26.923 14.65 0.00 0.00 2.57
97 98 8.203485 ACTTGTTTTTCTAGGCATTTCAAATGA 58.797 29.630 14.65 0.00 0.00 2.57
98 99 8.369218 ACTTGTTTTTCTAGGCATTTCAAATG 57.631 30.769 5.68 5.68 0.00 2.32
105 106 9.528489 TCCTAAATACTTGTTTTTCTAGGCATT 57.472 29.630 0.00 0.00 0.00 3.56
106 107 9.528489 TTCCTAAATACTTGTTTTTCTAGGCAT 57.472 29.630 0.00 0.00 0.00 4.40
107 108 8.789762 GTTCCTAAATACTTGTTTTTCTAGGCA 58.210 33.333 0.00 0.00 0.00 4.75
108 109 7.961283 CGTTCCTAAATACTTGTTTTTCTAGGC 59.039 37.037 0.00 0.00 0.00 3.93
109 110 8.448615 CCGTTCCTAAATACTTGTTTTTCTAGG 58.551 37.037 0.00 0.00 0.00 3.02
110 111 8.996271 ACCGTTCCTAAATACTTGTTTTTCTAG 58.004 33.333 0.00 0.00 0.00 2.43
111 112 8.776470 CACCGTTCCTAAATACTTGTTTTTCTA 58.224 33.333 0.00 0.00 0.00 2.10
112 113 7.255346 CCACCGTTCCTAAATACTTGTTTTTCT 60.255 37.037 0.00 0.00 0.00 2.52
113 114 6.859508 CCACCGTTCCTAAATACTTGTTTTTC 59.140 38.462 0.00 0.00 0.00 2.29
114 115 6.239092 CCCACCGTTCCTAAATACTTGTTTTT 60.239 38.462 0.00 0.00 0.00 1.94
115 116 5.242171 CCCACCGTTCCTAAATACTTGTTTT 59.758 40.000 0.00 0.00 0.00 2.43
116 117 4.763279 CCCACCGTTCCTAAATACTTGTTT 59.237 41.667 0.00 0.00 0.00 2.83
117 118 4.041938 TCCCACCGTTCCTAAATACTTGTT 59.958 41.667 0.00 0.00 0.00 2.83
118 119 3.583966 TCCCACCGTTCCTAAATACTTGT 59.416 43.478 0.00 0.00 0.00 3.16
119 120 4.189231 CTCCCACCGTTCCTAAATACTTG 58.811 47.826 0.00 0.00 0.00 3.16
120 121 3.842436 ACTCCCACCGTTCCTAAATACTT 59.158 43.478 0.00 0.00 0.00 2.24
121 122 3.447950 ACTCCCACCGTTCCTAAATACT 58.552 45.455 0.00 0.00 0.00 2.12
122 123 3.900966 ACTCCCACCGTTCCTAAATAC 57.099 47.619 0.00 0.00 0.00 1.89
123 124 4.870636 TCTACTCCCACCGTTCCTAAATA 58.129 43.478 0.00 0.00 0.00 1.40
124 125 3.716431 TCTACTCCCACCGTTCCTAAAT 58.284 45.455 0.00 0.00 0.00 1.40
125 126 3.173953 TCTACTCCCACCGTTCCTAAA 57.826 47.619 0.00 0.00 0.00 1.85
126 127 2.905415 TCTACTCCCACCGTTCCTAA 57.095 50.000 0.00 0.00 0.00 2.69
127 128 2.512896 AGATCTACTCCCACCGTTCCTA 59.487 50.000 0.00 0.00 0.00 2.94
128 129 1.288335 AGATCTACTCCCACCGTTCCT 59.712 52.381 0.00 0.00 0.00 3.36
129 130 1.409427 CAGATCTACTCCCACCGTTCC 59.591 57.143 0.00 0.00 0.00 3.62
130 131 2.376109 TCAGATCTACTCCCACCGTTC 58.624 52.381 0.00 0.00 0.00 3.95
131 132 2.496470 GTTCAGATCTACTCCCACCGTT 59.504 50.000 0.00 0.00 0.00 4.44
132 133 2.100989 GTTCAGATCTACTCCCACCGT 58.899 52.381 0.00 0.00 0.00 4.83
133 134 2.099921 CAGTTCAGATCTACTCCCACCG 59.900 54.545 0.00 0.00 0.00 4.94
134 135 2.159028 GCAGTTCAGATCTACTCCCACC 60.159 54.545 0.00 0.00 0.00 4.61
135 136 2.480416 CGCAGTTCAGATCTACTCCCAC 60.480 54.545 0.00 0.00 0.00 4.61
136 137 1.751351 CGCAGTTCAGATCTACTCCCA 59.249 52.381 0.00 0.00 0.00 4.37
137 138 1.751924 ACGCAGTTCAGATCTACTCCC 59.248 52.381 0.00 0.00 37.78 4.30
169 170 3.267483 AGCCGACACAATAACATGGTAC 58.733 45.455 0.00 0.00 0.00 3.34
198 199 1.174783 GACTACCACTTCTCGCCTGA 58.825 55.000 0.00 0.00 0.00 3.86
217 218 4.974721 ACAAGCAAGTGGGCCGGG 62.975 66.667 2.18 0.00 0.00 5.73
431 451 2.602878 TCTACGCGTTTAGAAAGCAGG 58.397 47.619 20.78 0.00 0.00 4.85
536 2174 5.300539 AGAAGATGCATGTAGATGTACGAGT 59.699 40.000 2.46 0.00 30.95 4.18
537 2175 5.628606 CAGAAGATGCATGTAGATGTACGAG 59.371 44.000 2.46 0.00 30.95 4.18
538 2176 5.523369 CAGAAGATGCATGTAGATGTACGA 58.477 41.667 2.46 0.00 30.95 3.43
553 2191 2.097629 TCTCGGAGTAACGCAGAAGATG 59.902 50.000 4.69 0.00 0.00 2.90
607 2245 2.158900 AGGGAGAGGTGATATGCGTTTG 60.159 50.000 0.00 0.00 0.00 2.93
608 2246 2.119495 AGGGAGAGGTGATATGCGTTT 58.881 47.619 0.00 0.00 0.00 3.60
610 2248 1.794714 AAGGGAGAGGTGATATGCGT 58.205 50.000 0.00 0.00 0.00 5.24
611 2249 2.918712 AAAGGGAGAGGTGATATGCG 57.081 50.000 0.00 0.00 0.00 4.73
612 2250 5.297569 AGTAAAAGGGAGAGGTGATATGC 57.702 43.478 0.00 0.00 0.00 3.14
615 2253 7.147949 CGTTCTTAGTAAAAGGGAGAGGTGATA 60.148 40.741 0.00 0.00 0.00 2.15
616 2254 6.351117 CGTTCTTAGTAAAAGGGAGAGGTGAT 60.351 42.308 0.00 0.00 0.00 3.06
617 2255 5.047519 CGTTCTTAGTAAAAGGGAGAGGTGA 60.048 44.000 0.00 0.00 0.00 4.02
618 2256 5.169295 CGTTCTTAGTAAAAGGGAGAGGTG 58.831 45.833 0.00 0.00 0.00 4.00
619 2257 4.322574 GCGTTCTTAGTAAAAGGGAGAGGT 60.323 45.833 0.00 0.00 0.00 3.85
624 2286 4.562143 GGACAGCGTTCTTAGTAAAAGGGA 60.562 45.833 0.00 0.00 0.00 4.20
627 2289 5.227908 TCAGGACAGCGTTCTTAGTAAAAG 58.772 41.667 0.00 0.00 0.00 2.27
632 2294 2.166664 GGATCAGGACAGCGTTCTTAGT 59.833 50.000 0.00 0.00 0.00 2.24
666 2328 2.154462 CAGGATCAGGACAGCGTTTTT 58.846 47.619 0.00 0.00 0.00 1.94
667 2329 1.813513 CAGGATCAGGACAGCGTTTT 58.186 50.000 0.00 0.00 0.00 2.43
668 2330 0.674895 GCAGGATCAGGACAGCGTTT 60.675 55.000 0.00 0.00 0.00 3.60
669 2331 1.078848 GCAGGATCAGGACAGCGTT 60.079 57.895 0.00 0.00 0.00 4.84
670 2332 2.581354 GCAGGATCAGGACAGCGT 59.419 61.111 0.00 0.00 0.00 5.07
671 2333 2.202987 GGCAGGATCAGGACAGCG 60.203 66.667 0.00 0.00 0.00 5.18
672 2334 2.202987 CGGCAGGATCAGGACAGC 60.203 66.667 0.00 0.00 0.00 4.40
673 2335 1.142748 GTCGGCAGGATCAGGACAG 59.857 63.158 0.00 0.00 0.00 3.51
674 2336 2.359169 GGTCGGCAGGATCAGGACA 61.359 63.158 0.00 0.00 0.00 4.02
675 2337 2.501610 GGTCGGCAGGATCAGGAC 59.498 66.667 0.00 0.00 0.00 3.85
847 2561 2.352651 TGAAATGATGAACTAGCAGCGC 59.647 45.455 0.00 0.00 0.00 5.92
848 2562 3.371898 TGTGAAATGATGAACTAGCAGCG 59.628 43.478 0.00 0.00 0.00 5.18
849 2563 4.394300 AGTGTGAAATGATGAACTAGCAGC 59.606 41.667 0.00 0.00 0.00 5.25
905 2619 2.015587 GGGTAGAGTCCAGTGAGTACG 58.984 57.143 0.00 0.00 0.00 3.67
915 2629 1.602327 GACGGGTGTGGGTAGAGTCC 61.602 65.000 0.00 0.00 0.00 3.85
916 2630 0.896940 TGACGGGTGTGGGTAGAGTC 60.897 60.000 0.00 0.00 0.00 3.36
917 2631 1.154454 TGACGGGTGTGGGTAGAGT 59.846 57.895 0.00 0.00 0.00 3.24
918 2632 1.590147 GTGACGGGTGTGGGTAGAG 59.410 63.158 0.00 0.00 0.00 2.43
919 2633 1.909781 GGTGACGGGTGTGGGTAGA 60.910 63.158 0.00 0.00 0.00 2.59
961 2675 3.700038 CCTCTTACCTGTACCTGTACCTG 59.300 52.174 5.07 0.00 35.26 4.00
962 2676 3.309701 CCCTCTTACCTGTACCTGTACCT 60.310 52.174 5.07 0.00 35.26 3.08
963 2677 3.029570 CCCTCTTACCTGTACCTGTACC 58.970 54.545 5.07 0.00 35.26 3.34
964 2678 2.429971 GCCCTCTTACCTGTACCTGTAC 59.570 54.545 0.45 0.45 36.63 2.90
965 2679 2.743553 GCCCTCTTACCTGTACCTGTA 58.256 52.381 0.00 0.00 0.00 2.74
966 2680 1.569653 GCCCTCTTACCTGTACCTGT 58.430 55.000 0.00 0.00 0.00 4.00
1185 2899 2.841988 AGGCGGATGAGGAGGAGC 60.842 66.667 0.00 0.00 0.00 4.70
1387 3101 1.549170 CGGAAACTACCTACTGGCAGT 59.451 52.381 25.34 25.34 41.55 4.40
1406 3120 0.246635 AACAACCCCGAGATCAGACG 59.753 55.000 0.00 0.00 0.00 4.18
1466 3180 5.243207 AGCTAACAGTTAATTTACACCGCT 58.757 37.500 0.00 0.00 0.00 5.52
1556 3278 0.684805 GGAGGAGAGGCGGAAGAGAA 60.685 60.000 0.00 0.00 0.00 2.87
1603 3325 3.326747 CGGAGTAACAAAAGAGGGTGAG 58.673 50.000 0.00 0.00 0.00 3.51
1605 3327 1.804748 GCGGAGTAACAAAAGAGGGTG 59.195 52.381 0.00 0.00 0.00 4.61
1608 3330 4.451629 TCTAGCGGAGTAACAAAAGAGG 57.548 45.455 0.00 0.00 0.00 3.69
1633 3355 5.499004 TTTACTCAATGTTACTGAGGCCT 57.501 39.130 3.86 3.86 43.88 5.19
1645 3367 9.722056 GGCTGTCACTTTTATATTTACTCAATG 57.278 33.333 0.00 0.00 0.00 2.82
1646 3368 9.686683 AGGCTGTCACTTTTATATTTACTCAAT 57.313 29.630 0.00 0.00 0.00 2.57
1647 3369 8.946085 CAGGCTGTCACTTTTATATTTACTCAA 58.054 33.333 6.28 0.00 0.00 3.02
1648 3370 8.318412 TCAGGCTGTCACTTTTATATTTACTCA 58.682 33.333 15.27 0.00 0.00 3.41
1649 3371 8.718102 TCAGGCTGTCACTTTTATATTTACTC 57.282 34.615 15.27 0.00 0.00 2.59
1650 3372 8.540388 TCTCAGGCTGTCACTTTTATATTTACT 58.460 33.333 15.27 0.00 0.00 2.24
1651 3373 8.718102 TCTCAGGCTGTCACTTTTATATTTAC 57.282 34.615 15.27 0.00 0.00 2.01
1663 3385 2.158449 CGTTTTGATCTCAGGCTGTCAC 59.842 50.000 15.27 5.69 0.00 3.67
1669 3391 2.151202 TGGAACGTTTTGATCTCAGGC 58.849 47.619 0.46 0.00 0.00 4.85
1671 3393 3.365364 GGCTTGGAACGTTTTGATCTCAG 60.365 47.826 0.46 0.00 0.00 3.35
1683 3405 1.850441 CGATACGTAAGGCTTGGAACG 59.150 52.381 16.99 16.99 46.39 3.95
1686 3408 1.066605 GAGCGATACGTAAGGCTTGGA 59.933 52.381 20.39 0.00 46.39 3.53
1687 3409 1.488527 GAGCGATACGTAAGGCTTGG 58.511 55.000 20.39 4.22 46.39 3.61
1709 3432 6.072112 ACTTTTCGTTTGTGCATGATAGTT 57.928 33.333 0.00 0.00 0.00 2.24
1713 3436 4.050553 CCAACTTTTCGTTTGTGCATGAT 58.949 39.130 0.00 0.00 32.27 2.45
1718 3441 2.601314 GGTTCCAACTTTTCGTTTGTGC 59.399 45.455 0.00 0.00 32.27 4.57
1755 3478 3.938963 TCACTATCGATTCAAAAGGCACC 59.061 43.478 1.71 0.00 0.00 5.01
1763 3486 2.536365 GGCGTGTCACTATCGATTCAA 58.464 47.619 1.71 0.00 0.00 2.69
1808 3531 4.967084 TGAGCTTTTTGGAGTGGTAGTA 57.033 40.909 0.00 0.00 0.00 1.82
1809 3532 3.857157 TGAGCTTTTTGGAGTGGTAGT 57.143 42.857 0.00 0.00 0.00 2.73
1810 3533 3.119708 GCATGAGCTTTTTGGAGTGGTAG 60.120 47.826 0.00 0.00 37.91 3.18
1814 3537 3.250744 CATGCATGAGCTTTTTGGAGTG 58.749 45.455 22.59 0.00 42.74 3.51
1846 3569 5.188751 ACACCATGACCCTCAAAAAGAAAAA 59.811 36.000 0.00 0.00 0.00 1.94
1847 3570 4.714308 ACACCATGACCCTCAAAAAGAAAA 59.286 37.500 0.00 0.00 0.00 2.29
1848 3571 4.285863 ACACCATGACCCTCAAAAAGAAA 58.714 39.130 0.00 0.00 0.00 2.52
1849 3572 3.909732 ACACCATGACCCTCAAAAAGAA 58.090 40.909 0.00 0.00 0.00 2.52
1850 3573 3.593442 ACACCATGACCCTCAAAAAGA 57.407 42.857 0.00 0.00 0.00 2.52
1851 3574 3.891366 AGAACACCATGACCCTCAAAAAG 59.109 43.478 0.00 0.00 0.00 2.27
1852 3575 3.636300 CAGAACACCATGACCCTCAAAAA 59.364 43.478 0.00 0.00 0.00 1.94
1853 3576 3.221771 CAGAACACCATGACCCTCAAAA 58.778 45.455 0.00 0.00 0.00 2.44
1854 3577 2.862541 CAGAACACCATGACCCTCAAA 58.137 47.619 0.00 0.00 0.00 2.69
1855 3578 1.545428 GCAGAACACCATGACCCTCAA 60.545 52.381 0.00 0.00 0.00 3.02
1856 3579 0.036732 GCAGAACACCATGACCCTCA 59.963 55.000 0.00 0.00 0.00 3.86
1857 3580 0.326264 AGCAGAACACCATGACCCTC 59.674 55.000 0.00 0.00 0.00 4.30
1858 3581 0.037303 CAGCAGAACACCATGACCCT 59.963 55.000 0.00 0.00 0.00 4.34
1859 3582 0.036732 TCAGCAGAACACCATGACCC 59.963 55.000 0.00 0.00 0.00 4.46
1860 3583 2.119801 ATCAGCAGAACACCATGACC 57.880 50.000 0.00 0.00 0.00 4.02
1861 3584 3.866651 ACTATCAGCAGAACACCATGAC 58.133 45.455 0.00 0.00 0.00 3.06
1862 3585 4.442052 GCTACTATCAGCAGAACACCATGA 60.442 45.833 0.00 0.00 41.40 3.07
1863 3586 3.806521 GCTACTATCAGCAGAACACCATG 59.193 47.826 0.00 0.00 41.40 3.66
1864 3587 3.181461 GGCTACTATCAGCAGAACACCAT 60.181 47.826 0.00 0.00 43.67 3.55
1865 3588 2.168521 GGCTACTATCAGCAGAACACCA 59.831 50.000 0.00 0.00 43.67 4.17
1866 3589 2.799917 CGGCTACTATCAGCAGAACACC 60.800 54.545 0.00 0.00 43.67 4.16
1867 3590 2.099263 TCGGCTACTATCAGCAGAACAC 59.901 50.000 0.00 0.00 41.78 3.32
1868 3591 2.375146 TCGGCTACTATCAGCAGAACA 58.625 47.619 0.00 0.00 41.78 3.18
1869 3592 3.438297 TTCGGCTACTATCAGCAGAAC 57.562 47.619 6.59 0.00 46.30 3.01
1871 3594 3.194755 TGTTTTCGGCTACTATCAGCAGA 59.805 43.478 0.00 0.00 42.79 4.26
1872 3595 3.521560 TGTTTTCGGCTACTATCAGCAG 58.478 45.455 0.00 0.00 43.67 4.24
1873 3596 3.603158 TGTTTTCGGCTACTATCAGCA 57.397 42.857 0.00 0.00 43.67 4.41
1951 3674 2.731976 GCGGCTAAATATCTCCGTCAAG 59.268 50.000 0.00 0.00 43.45 3.02
1970 3693 2.339418 TGTTAGTACACGGATTTGGCG 58.661 47.619 0.00 0.00 0.00 5.69
1996 6211 3.638484 TGTGCGTAGGATGAATGTATCG 58.362 45.455 0.00 0.00 0.00 2.92
2007 6222 1.372499 GTTCGTGCTGTGCGTAGGA 60.372 57.895 0.00 0.00 0.00 2.94
2012 6227 2.716828 CCTACGTTCGTGCTGTGCG 61.717 63.158 8.14 0.00 0.00 5.34
2014 6229 2.716828 CGCCTACGTTCGTGCTGTG 61.717 63.158 8.14 0.00 33.53 3.66
2046 6261 3.478857 TGTAAAGAGGAACCAAGCGAA 57.521 42.857 0.00 0.00 0.00 4.70
2091 6306 4.215613 AGAGAAAGCGCGTTCCTTATTTTT 59.784 37.500 28.52 10.72 0.00 1.94
2092 6307 3.751698 AGAGAAAGCGCGTTCCTTATTTT 59.248 39.130 28.52 11.43 0.00 1.82
2093 6308 3.125316 CAGAGAAAGCGCGTTCCTTATTT 59.875 43.478 28.52 12.13 0.00 1.40
2094 6309 2.673368 CAGAGAAAGCGCGTTCCTTATT 59.327 45.455 28.52 12.83 0.00 1.40
2095 6310 2.271800 CAGAGAAAGCGCGTTCCTTAT 58.728 47.619 28.52 13.19 0.00 1.73
2096 6311 1.000506 ACAGAGAAAGCGCGTTCCTTA 59.999 47.619 28.52 0.00 0.00 2.69
2097 6312 0.249911 ACAGAGAAAGCGCGTTCCTT 60.250 50.000 28.52 16.41 0.00 3.36
2098 6313 0.601558 TACAGAGAAAGCGCGTTCCT 59.398 50.000 28.52 22.06 0.00 3.36
2099 6314 1.641577 ATACAGAGAAAGCGCGTTCC 58.358 50.000 28.52 20.44 0.00 3.62
2100 6315 2.924290 AGAATACAGAGAAAGCGCGTTC 59.076 45.455 25.73 25.73 0.00 3.95
2101 6316 2.668457 CAGAATACAGAGAAAGCGCGTT 59.332 45.455 8.72 8.72 0.00 4.84
2102 6317 2.263077 CAGAATACAGAGAAAGCGCGT 58.737 47.619 8.43 0.00 0.00 6.01
2103 6318 2.028523 CACAGAATACAGAGAAAGCGCG 59.971 50.000 0.00 0.00 0.00 6.86
2104 6319 2.996621 ACACAGAATACAGAGAAAGCGC 59.003 45.455 0.00 0.00 0.00 5.92
2105 6320 6.700020 CAATACACAGAATACAGAGAAAGCG 58.300 40.000 0.00 0.00 0.00 4.68
2106 6321 6.092670 TGCAATACACAGAATACAGAGAAAGC 59.907 38.462 0.00 0.00 0.00 3.51
2107 6322 7.601073 TGCAATACACAGAATACAGAGAAAG 57.399 36.000 0.00 0.00 0.00 2.62
2123 6338 1.677300 CAAGCCCCGGTGCAATACA 60.677 57.895 12.68 0.00 0.00 2.29
2124 6339 1.377987 TCAAGCCCCGGTGCAATAC 60.378 57.895 12.68 0.00 0.00 1.89
2125 6340 1.377987 GTCAAGCCCCGGTGCAATA 60.378 57.895 12.68 0.00 0.00 1.90
2126 6341 2.676471 GTCAAGCCCCGGTGCAAT 60.676 61.111 12.68 0.00 0.00 3.56
2127 6342 3.723097 TTGTCAAGCCCCGGTGCAA 62.723 57.895 12.68 3.88 0.00 4.08
2128 6343 4.196778 TTGTCAAGCCCCGGTGCA 62.197 61.111 12.68 0.00 0.00 4.57
2129 6344 3.365265 CTTGTCAAGCCCCGGTGC 61.365 66.667 0.00 0.00 0.00 5.01
2130 6345 2.113139 ACTTGTCAAGCCCCGGTG 59.887 61.111 12.66 0.00 0.00 4.94
2131 6346 2.113139 CACTTGTCAAGCCCCGGT 59.887 61.111 12.66 0.00 0.00 5.28
2132 6347 1.966451 GACACTTGTCAAGCCCCGG 60.966 63.158 12.66 0.00 44.18 5.73
2133 6348 3.655481 GACACTTGTCAAGCCCCG 58.345 61.111 12.66 1.88 44.18 5.73
2141 6356 6.072112 TGCAGGAAATAAAAGACACTTGTC 57.928 37.500 0.77 0.77 45.08 3.18
2142 6357 6.463995 TTGCAGGAAATAAAAGACACTTGT 57.536 33.333 0.00 0.00 0.00 3.16
2143 6358 7.115378 GTGATTGCAGGAAATAAAAGACACTTG 59.885 37.037 0.00 0.00 0.00 3.16
2144 6359 7.147976 GTGATTGCAGGAAATAAAAGACACTT 58.852 34.615 0.00 0.00 0.00 3.16
2145 6360 6.294731 GGTGATTGCAGGAAATAAAAGACACT 60.295 38.462 0.00 0.00 0.00 3.55
2146 6361 5.863935 GGTGATTGCAGGAAATAAAAGACAC 59.136 40.000 0.00 0.00 0.00 3.67
2147 6362 5.047377 GGGTGATTGCAGGAAATAAAAGACA 60.047 40.000 0.00 0.00 0.00 3.41
2148 6363 5.410924 GGGTGATTGCAGGAAATAAAAGAC 58.589 41.667 0.00 0.00 0.00 3.01
2149 6364 4.157656 CGGGTGATTGCAGGAAATAAAAGA 59.842 41.667 0.00 0.00 0.00 2.52
2150 6365 4.423732 CGGGTGATTGCAGGAAATAAAAG 58.576 43.478 0.00 0.00 0.00 2.27
2151 6366 3.194542 CCGGGTGATTGCAGGAAATAAAA 59.805 43.478 0.00 0.00 0.00 1.52
2152 6367 2.757868 CCGGGTGATTGCAGGAAATAAA 59.242 45.455 0.00 0.00 0.00 1.40
2153 6368 2.025793 TCCGGGTGATTGCAGGAAATAA 60.026 45.455 0.00 0.00 0.00 1.40
2154 6369 1.562008 TCCGGGTGATTGCAGGAAATA 59.438 47.619 0.00 0.00 0.00 1.40
2155 6370 0.331278 TCCGGGTGATTGCAGGAAAT 59.669 50.000 0.00 0.00 0.00 2.17
2156 6371 0.608035 GTCCGGGTGATTGCAGGAAA 60.608 55.000 0.00 0.00 32.20 3.13
2157 6372 1.002624 GTCCGGGTGATTGCAGGAA 60.003 57.895 0.00 0.00 32.20 3.36
2158 6373 2.668632 GTCCGGGTGATTGCAGGA 59.331 61.111 0.00 0.00 0.00 3.86
2159 6374 2.796483 TTCGTCCGGGTGATTGCAGG 62.796 60.000 0.00 0.00 0.00 4.85
2160 6375 1.375396 TTCGTCCGGGTGATTGCAG 60.375 57.895 0.00 0.00 0.00 4.41
2161 6376 1.669760 GTTCGTCCGGGTGATTGCA 60.670 57.895 0.00 0.00 0.00 4.08
2162 6377 1.635663 CTGTTCGTCCGGGTGATTGC 61.636 60.000 0.00 0.00 0.00 3.56
2163 6378 0.320421 ACTGTTCGTCCGGGTGATTG 60.320 55.000 0.00 0.00 0.00 2.67
2164 6379 0.037605 GACTGTTCGTCCGGGTGATT 60.038 55.000 0.00 0.00 36.62 2.57
2165 6380 1.590147 GACTGTTCGTCCGGGTGAT 59.410 57.895 0.00 0.00 36.62 3.06
2166 6381 3.045142 GACTGTTCGTCCGGGTGA 58.955 61.111 0.00 0.00 36.62 4.02
2173 6388 3.125316 GGTCAATGAATGGACTGTTCGTC 59.875 47.826 0.00 0.00 42.07 4.20
2174 6389 3.074412 GGTCAATGAATGGACTGTTCGT 58.926 45.455 0.00 0.00 34.49 3.85
2175 6390 3.125829 CAGGTCAATGAATGGACTGTTCG 59.874 47.826 0.00 0.00 34.49 3.95
2176 6391 4.326826 TCAGGTCAATGAATGGACTGTTC 58.673 43.478 0.00 0.00 35.79 3.18
2177 6392 4.371624 TCAGGTCAATGAATGGACTGTT 57.628 40.909 0.00 0.00 35.79 3.16
2178 6393 4.371624 TTCAGGTCAATGAATGGACTGT 57.628 40.909 0.00 0.00 34.31 3.55
2179 6394 5.710513 TTTTCAGGTCAATGAATGGACTG 57.289 39.130 0.00 0.00 38.90 3.51
2199 6414 0.482887 CCCTCTGGGTCAGGGTTTTT 59.517 55.000 0.00 0.00 45.35 1.94
2200 6415 2.164393 CCCTCTGGGTCAGGGTTTT 58.836 57.895 0.00 0.00 45.35 2.43
2201 6416 3.922366 CCCTCTGGGTCAGGGTTT 58.078 61.111 0.00 0.00 45.35 3.27
2205 6420 3.775654 GTCGCCCTCTGGGTCAGG 61.776 72.222 4.42 0.00 46.51 3.86
2206 6421 2.681778 AGTCGCCCTCTGGGTCAG 60.682 66.667 4.42 0.00 46.51 3.51
2207 6422 2.680352 GAGTCGCCCTCTGGGTCA 60.680 66.667 4.42 0.00 46.51 4.02
2208 6423 2.680352 TGAGTCGCCCTCTGGGTC 60.680 66.667 4.42 0.00 46.51 4.46
2209 6424 2.997897 GTGAGTCGCCCTCTGGGT 60.998 66.667 4.42 0.00 46.51 4.51
2211 6426 4.135153 CGGTGAGTCGCCCTCTGG 62.135 72.222 17.13 0.00 41.11 3.86
2212 6427 4.135153 CCGGTGAGTCGCCCTCTG 62.135 72.222 17.13 2.83 41.11 3.35
2213 6428 3.881019 TTCCGGTGAGTCGCCCTCT 62.881 63.158 17.13 0.00 41.11 3.69
2214 6429 3.379445 TTCCGGTGAGTCGCCCTC 61.379 66.667 17.13 0.00 40.89 4.30
2215 6430 3.692406 GTTCCGGTGAGTCGCCCT 61.692 66.667 17.13 0.00 0.00 5.19
2216 6431 4.754667 GGTTCCGGTGAGTCGCCC 62.755 72.222 17.13 2.82 0.00 6.13
2217 6432 4.754667 GGGTTCCGGTGAGTCGCC 62.755 72.222 13.05 13.05 0.00 5.54
2218 6433 3.236003 AAGGGTTCCGGTGAGTCGC 62.236 63.158 0.00 0.00 0.00 5.19
2219 6434 1.080025 GAAGGGTTCCGGTGAGTCG 60.080 63.158 0.00 0.00 0.00 4.18
2220 6435 0.685660 AAGAAGGGTTCCGGTGAGTC 59.314 55.000 0.00 0.00 0.00 3.36
2221 6436 2.019807 TAAGAAGGGTTCCGGTGAGT 57.980 50.000 0.00 0.00 0.00 3.41
2222 6437 2.158943 GGATAAGAAGGGTTCCGGTGAG 60.159 54.545 0.00 0.00 0.00 3.51
2223 6438 1.835531 GGATAAGAAGGGTTCCGGTGA 59.164 52.381 0.00 0.00 0.00 4.02
2224 6439 1.557832 TGGATAAGAAGGGTTCCGGTG 59.442 52.381 0.00 0.00 0.00 4.94
2225 6440 1.838077 CTGGATAAGAAGGGTTCCGGT 59.162 52.381 0.00 0.00 31.25 5.28
2226 6441 1.475213 GCTGGATAAGAAGGGTTCCGG 60.475 57.143 0.00 0.00 37.63 5.14
2227 6442 1.475213 GGCTGGATAAGAAGGGTTCCG 60.475 57.143 0.00 0.00 0.00 4.30
2228 6443 1.133761 GGGCTGGATAAGAAGGGTTCC 60.134 57.143 0.00 0.00 0.00 3.62
2229 6444 1.564348 TGGGCTGGATAAGAAGGGTTC 59.436 52.381 0.00 0.00 0.00 3.62
2230 6445 1.681229 TGGGCTGGATAAGAAGGGTT 58.319 50.000 0.00 0.00 0.00 4.11
2231 6446 1.681229 TTGGGCTGGATAAGAAGGGT 58.319 50.000 0.00 0.00 0.00 4.34
2232 6447 2.826674 TTTGGGCTGGATAAGAAGGG 57.173 50.000 0.00 0.00 0.00 3.95
2233 6448 8.360390 GTTTTATATTTGGGCTGGATAAGAAGG 58.640 37.037 0.00 0.00 0.00 3.46
2234 6449 8.076178 CGTTTTATATTTGGGCTGGATAAGAAG 58.924 37.037 0.00 0.00 0.00 2.85
2235 6450 7.013846 CCGTTTTATATTTGGGCTGGATAAGAA 59.986 37.037 0.00 0.00 0.00 2.52
2236 6451 6.488683 CCGTTTTATATTTGGGCTGGATAAGA 59.511 38.462 0.00 0.00 0.00 2.10
2237 6452 6.488683 TCCGTTTTATATTTGGGCTGGATAAG 59.511 38.462 0.00 0.00 0.00 1.73
2238 6453 6.366340 TCCGTTTTATATTTGGGCTGGATAA 58.634 36.000 0.00 0.00 0.00 1.75
2239 6454 5.942961 TCCGTTTTATATTTGGGCTGGATA 58.057 37.500 0.00 0.00 0.00 2.59
2240 6455 4.798882 TCCGTTTTATATTTGGGCTGGAT 58.201 39.130 0.00 0.00 0.00 3.41
2241 6456 4.237976 TCCGTTTTATATTTGGGCTGGA 57.762 40.909 0.00 0.00 0.00 3.86
2242 6457 6.642707 TTATCCGTTTTATATTTGGGCTGG 57.357 37.500 0.00 0.00 0.00 4.85
2243 6458 6.016276 AGCTTATCCGTTTTATATTTGGGCTG 60.016 38.462 0.00 0.00 0.00 4.85
2244 6459 6.068670 AGCTTATCCGTTTTATATTTGGGCT 58.931 36.000 0.00 0.00 0.00 5.19
2245 6460 6.327279 AGCTTATCCGTTTTATATTTGGGC 57.673 37.500 0.00 0.00 0.00 5.36
2246 6461 7.145323 CCAAGCTTATCCGTTTTATATTTGGG 58.855 38.462 0.00 0.00 0.00 4.12
2247 6462 7.145323 CCCAAGCTTATCCGTTTTATATTTGG 58.855 38.462 0.00 0.00 0.00 3.28
2248 6463 7.647715 CACCCAAGCTTATCCGTTTTATATTTG 59.352 37.037 0.00 0.00 0.00 2.32
2249 6464 7.201875 CCACCCAAGCTTATCCGTTTTATATTT 60.202 37.037 0.00 0.00 0.00 1.40
2250 6465 6.264518 CCACCCAAGCTTATCCGTTTTATATT 59.735 38.462 0.00 0.00 0.00 1.28
2251 6466 5.768164 CCACCCAAGCTTATCCGTTTTATAT 59.232 40.000 0.00 0.00 0.00 0.86
2252 6467 5.127491 CCACCCAAGCTTATCCGTTTTATA 58.873 41.667 0.00 0.00 0.00 0.98
2253 6468 3.951680 CCACCCAAGCTTATCCGTTTTAT 59.048 43.478 0.00 0.00 0.00 1.40
2254 6469 3.349022 CCACCCAAGCTTATCCGTTTTA 58.651 45.455 0.00 0.00 0.00 1.52
2255 6470 2.167662 CCACCCAAGCTTATCCGTTTT 58.832 47.619 0.00 0.00 0.00 2.43
2256 6471 1.834188 CCACCCAAGCTTATCCGTTT 58.166 50.000 0.00 0.00 0.00 3.60
2257 6472 0.679960 GCCACCCAAGCTTATCCGTT 60.680 55.000 0.00 0.00 0.00 4.44
2258 6473 1.077716 GCCACCCAAGCTTATCCGT 60.078 57.895 0.00 0.00 0.00 4.69
2259 6474 2.180204 CGCCACCCAAGCTTATCCG 61.180 63.158 0.00 0.00 0.00 4.18
2260 6475 0.815615 CTCGCCACCCAAGCTTATCC 60.816 60.000 0.00 0.00 0.00 2.59
2261 6476 0.815615 CCTCGCCACCCAAGCTTATC 60.816 60.000 0.00 0.00 0.00 1.75
2262 6477 1.224592 CCTCGCCACCCAAGCTTAT 59.775 57.895 0.00 0.00 0.00 1.73
2263 6478 2.668632 CCTCGCCACCCAAGCTTA 59.331 61.111 0.00 0.00 0.00 3.09
2264 6479 4.351054 CCCTCGCCACCCAAGCTT 62.351 66.667 0.00 0.00 0.00 3.74
2267 6482 4.101448 CTCCCCTCGCCACCCAAG 62.101 72.222 0.00 0.00 0.00 3.61
2268 6483 4.974438 ACTCCCCTCGCCACCCAA 62.974 66.667 0.00 0.00 0.00 4.12
2271 6486 3.316573 CTTCACTCCCCTCGCCACC 62.317 68.421 0.00 0.00 0.00 4.61
2272 6487 2.266055 CTTCACTCCCCTCGCCAC 59.734 66.667 0.00 0.00 0.00 5.01
2273 6488 2.203788 ACTTCACTCCCCTCGCCA 60.204 61.111 0.00 0.00 0.00 5.69
2274 6489 1.827399 TTCACTTCACTCCCCTCGCC 61.827 60.000 0.00 0.00 0.00 5.54
2275 6490 0.390472 CTTCACTTCACTCCCCTCGC 60.390 60.000 0.00 0.00 0.00 5.03
2276 6491 0.969894 ACTTCACTTCACTCCCCTCG 59.030 55.000 0.00 0.00 0.00 4.63
2277 6492 1.002544 CCACTTCACTTCACTCCCCTC 59.997 57.143 0.00 0.00 0.00 4.30
2278 6493 1.059913 CCACTTCACTTCACTCCCCT 58.940 55.000 0.00 0.00 0.00 4.79
2279 6494 0.606673 GCCACTTCACTTCACTCCCC 60.607 60.000 0.00 0.00 0.00 4.81
2280 6495 0.398318 AGCCACTTCACTTCACTCCC 59.602 55.000 0.00 0.00 0.00 4.30
2281 6496 2.354203 CCTAGCCACTTCACTTCACTCC 60.354 54.545 0.00 0.00 0.00 3.85
2282 6497 2.300437 ACCTAGCCACTTCACTTCACTC 59.700 50.000 0.00 0.00 0.00 3.51
2283 6498 2.330216 ACCTAGCCACTTCACTTCACT 58.670 47.619 0.00 0.00 0.00 3.41
2284 6499 2.841442 ACCTAGCCACTTCACTTCAC 57.159 50.000 0.00 0.00 0.00 3.18
2285 6500 3.476552 CAAACCTAGCCACTTCACTTCA 58.523 45.455 0.00 0.00 0.00 3.02
2286 6501 2.814336 CCAAACCTAGCCACTTCACTTC 59.186 50.000 0.00 0.00 0.00 3.01
2287 6502 2.174854 ACCAAACCTAGCCACTTCACTT 59.825 45.455 0.00 0.00 0.00 3.16
2288 6503 1.774856 ACCAAACCTAGCCACTTCACT 59.225 47.619 0.00 0.00 0.00 3.41
2289 6504 2.271944 ACCAAACCTAGCCACTTCAC 57.728 50.000 0.00 0.00 0.00 3.18
2290 6505 2.808933 CGAACCAAACCTAGCCACTTCA 60.809 50.000 0.00 0.00 0.00 3.02
2291 6506 1.804748 CGAACCAAACCTAGCCACTTC 59.195 52.381 0.00 0.00 0.00 3.01
2292 6507 1.544759 CCGAACCAAACCTAGCCACTT 60.545 52.381 0.00 0.00 0.00 3.16
2293 6508 0.036306 CCGAACCAAACCTAGCCACT 59.964 55.000 0.00 0.00 0.00 4.00
2294 6509 0.958876 CCCGAACCAAACCTAGCCAC 60.959 60.000 0.00 0.00 0.00 5.01
2295 6510 1.128809 TCCCGAACCAAACCTAGCCA 61.129 55.000 0.00 0.00 0.00 4.75
2296 6511 0.392595 CTCCCGAACCAAACCTAGCC 60.393 60.000 0.00 0.00 0.00 3.93
2297 6512 0.323957 ACTCCCGAACCAAACCTAGC 59.676 55.000 0.00 0.00 0.00 3.42
2298 6513 1.338769 CCACTCCCGAACCAAACCTAG 60.339 57.143 0.00 0.00 0.00 3.02
2299 6514 0.688487 CCACTCCCGAACCAAACCTA 59.312 55.000 0.00 0.00 0.00 3.08
2300 6515 1.057851 TCCACTCCCGAACCAAACCT 61.058 55.000 0.00 0.00 0.00 3.50
2301 6516 0.037734 ATCCACTCCCGAACCAAACC 59.962 55.000 0.00 0.00 0.00 3.27
2302 6517 1.165270 CATCCACTCCCGAACCAAAC 58.835 55.000 0.00 0.00 0.00 2.93
2303 6518 1.003118 CTCATCCACTCCCGAACCAAA 59.997 52.381 0.00 0.00 0.00 3.28
2304 6519 0.613260 CTCATCCACTCCCGAACCAA 59.387 55.000 0.00 0.00 0.00 3.67
2305 6520 0.252057 TCTCATCCACTCCCGAACCA 60.252 55.000 0.00 0.00 0.00 3.67
2306 6521 0.902531 TTCTCATCCACTCCCGAACC 59.097 55.000 0.00 0.00 0.00 3.62
2307 6522 1.134670 CCTTCTCATCCACTCCCGAAC 60.135 57.143 0.00 0.00 0.00 3.95
2308 6523 1.195115 CCTTCTCATCCACTCCCGAA 58.805 55.000 0.00 0.00 0.00 4.30
2309 6524 0.335019 TCCTTCTCATCCACTCCCGA 59.665 55.000 0.00 0.00 0.00 5.14
2310 6525 0.461961 GTCCTTCTCATCCACTCCCG 59.538 60.000 0.00 0.00 0.00 5.14
2311 6526 1.872773 AGTCCTTCTCATCCACTCCC 58.127 55.000 0.00 0.00 0.00 4.30
2312 6527 4.770010 CCTATAGTCCTTCTCATCCACTCC 59.230 50.000 0.00 0.00 0.00 3.85
2313 6528 5.636123 TCCTATAGTCCTTCTCATCCACTC 58.364 45.833 0.00 0.00 0.00 3.51
2314 6529 5.671463 TCCTATAGTCCTTCTCATCCACT 57.329 43.478 0.00 0.00 0.00 4.00
2315 6530 5.186797 CCATCCTATAGTCCTTCTCATCCAC 59.813 48.000 0.00 0.00 0.00 4.02
2316 6531 5.336945 CCATCCTATAGTCCTTCTCATCCA 58.663 45.833 0.00 0.00 0.00 3.41
2317 6532 4.714308 CCCATCCTATAGTCCTTCTCATCC 59.286 50.000 0.00 0.00 0.00 3.51
2318 6533 4.161377 GCCCATCCTATAGTCCTTCTCATC 59.839 50.000 0.00 0.00 0.00 2.92
2319 6534 4.100373 GCCCATCCTATAGTCCTTCTCAT 58.900 47.826 0.00 0.00 0.00 2.90
2320 6535 3.511477 GCCCATCCTATAGTCCTTCTCA 58.489 50.000 0.00 0.00 0.00 3.27
2321 6536 2.835156 GGCCCATCCTATAGTCCTTCTC 59.165 54.545 0.00 0.00 0.00 2.87
2322 6537 2.182312 TGGCCCATCCTATAGTCCTTCT 59.818 50.000 0.00 0.00 35.26 2.85
2323 6538 2.621070 TGGCCCATCCTATAGTCCTTC 58.379 52.381 0.00 0.00 35.26 3.46
2324 6539 2.815357 TGGCCCATCCTATAGTCCTT 57.185 50.000 0.00 0.00 35.26 3.36
2325 6540 2.915604 CAATGGCCCATCCTATAGTCCT 59.084 50.000 0.00 0.00 35.26 3.85
2326 6541 2.619074 GCAATGGCCCATCCTATAGTCC 60.619 54.545 0.00 0.00 35.26 3.85
2327 6542 2.716217 GCAATGGCCCATCCTATAGTC 58.284 52.381 0.00 0.00 35.26 2.59
2328 6543 1.003580 CGCAATGGCCCATCCTATAGT 59.996 52.381 0.00 0.00 36.38 2.12
2329 6544 1.679944 CCGCAATGGCCCATCCTATAG 60.680 57.143 0.00 0.00 36.38 1.31
2330 6545 0.327924 CCGCAATGGCCCATCCTATA 59.672 55.000 0.00 0.00 36.38 1.31
2331 6546 1.075482 CCGCAATGGCCCATCCTAT 59.925 57.895 0.00 0.00 36.38 2.57
2332 6547 2.515398 CCGCAATGGCCCATCCTA 59.485 61.111 0.00 0.00 36.38 2.94
2333 6548 4.528039 CCCGCAATGGCCCATCCT 62.528 66.667 0.00 0.00 36.38 3.24
2353 6568 4.754667 GTCCGCCAAGTCGTCCCC 62.755 72.222 0.00 0.00 0.00 4.81
2366 6581 4.814294 GGTGTGCCTAGGCGTCCG 62.814 72.222 28.28 0.00 45.51 4.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.