AutoCloner

Multiple sequence alignment - TraesCS4D01G165400

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)

BLAST Results

Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

	qseqid	sseqid	percentage.identical	alignment.length	no.mismatch	no.gap.openings	qstart	qend	sstart	send	evalue	bitscore
0	TraesCS4D01G165400	chr4D	100.000	9247	0	0	1	9247	274458754	274468000	0.000000e+00	17077.0
1	TraesCS4D01G165400	chr4D	92.358	2277	118	15	3554	5794	448522234	448524490	0.000000e+00	3190.0
2	TraesCS4D01G165400	chr4D	93.093	333	20	3	5462	5794	1866858	1866529	1.400000e-132	484.0
3	TraesCS4D01G165400	chr4D	92.424	330	21	3	5465	5794	1818838	1818513	1.410000e-127	468.0
4	TraesCS4D01G165400	chr4D	75.573	786	170	15	6503	7283	286394633	286393865	1.470000e-97	368.0
5	TraesCS4D01G165400	chr4D	94.186	172	9	1	8761	8931	25900893	25900722	2.560000e-65	261.0
6	TraesCS4D01G165400	chr4D	95.000	40	2	0	9046	9085	401206862	401206823	7.750000e-06	63.9
7	TraesCS4D01G165400	chr4D	87.755	49	6	0	9047	9095	34674694	34674646	3.610000e-04	58.4
8	TraesCS4D01G165400	chr4B	95.622	3061	83	23	539	3554	273623601	273620547	0.000000e+00	4863.0
9	TraesCS4D01G165400	chr4B	98.036	2037	40	0	6317	8353	273619848	273617812	0.000000e+00	3541.0
10	TraesCS4D01G165400	chr4B	87.687	1405	150	15	3760	5160	139941084	139942469	0.000000e+00	1615.0
11	TraesCS4D01G165400	chr4B	94.828	348	16	1	5813	6160	273620548	273620203	8.170000e-150	542.0
12	TraesCS4D01G165400	chr4B	75.849	795	170	15	6503	7292	276962610	276963387	1.460000e-102	385.0
13	TraesCS4D01G165400	chr4B	98.765	162	2	0	6158	6319	273620122	273619961	1.170000e-73	289.0
14	TraesCS4D01G165400	chr4B	89.778	225	10	6	8549	8760	273617809	273617585	9.150000e-70	276.0
15	TraesCS4D01G165400	chr4B	90.291	206	13	5	9046	9247	273617525	273617323	7.120000e-66	263.0
16	TraesCS4D01G165400	chr4B	86.275	204	23	3	8764	8964	323794658	323794457	5.620000e-52	217.0
17	TraesCS4D01G165400	chr4B	78.022	182	21	7	8925	9089	467273923	467273744	7.640000e-16	97.1
18	TraesCS4D01G165400	chr4B	88.571	70	5	3	8697	8766	560312791	560312725	2.140000e-11	82.4
19	TraesCS4D01G165400	chr4A	96.680	2560	68	8	5797	8353	208822406	208824951	0.000000e+00	4241.0
20	TraesCS4D01G165400	chr4A	96.401	1806	52	5	1758	3554	208820609	208822410	0.000000e+00	2963.0
21	TraesCS4D01G165400	chr4A	93.352	1053	24	13	555	1574	208815045	208816084	0.000000e+00	1515.0
22	TraesCS4D01G165400	chr4A	75.498	804	175	15	6503	7301	207979887	207979101	3.150000e-99	374.0
23	TraesCS4D01G165400	chr4A	90.094	212	19	2	8356	8565	200349843	200350054	3.290000e-69	274.0
24	TraesCS4D01G165400	chr4A	94.152	171	10	0	8760	8930	665604118	665604288	2.560000e-65	261.0
25	TraesCS4D01G165400	chr4A	89.474	209	8	2	8549	8757	208824954	208825148	1.540000e-62	252.0
26	TraesCS4D01G165400	chr4A	92.903	155	5	4	9095	9247	208827386	208827536	4.350000e-53	220.0
27	TraesCS4D01G165400	chr4A	93.985	133	4	2	1568	1700	208820483	208820611	2.040000e-46	198.0
28	TraesCS4D01G165400	chr4A	88.462	104	10	2	8936	9039	692357842	692357943	3.510000e-24	124.0
29	TraesCS4D01G165400	chr4A	94.000	50	3	0	9036	9085	503630539	503630588	9.960000e-10	76.8
30	TraesCS4D01G165400	chr4A	95.000	40	2	0	503	542	208808684	208808723	7.750000e-06	63.9
31	TraesCS4D01G165400	chr1D	93.366	2261	117	12	3566	5794	98832706	98830447	0.000000e+00	3314.0
32	TraesCS4D01G165400	chr1D	93.245	2265	117	9	3555	5794	98830439	98828186	0.000000e+00	3302.0
33	TraesCS4D01G165400	chr1D	92.516	2258	149	5	3555	5794	199328709	199330964	0.000000e+00	3216.0
34	TraesCS4D01G165400	chr1D	87.897	818	70	7	3555	4360	11323303	11324103	0.000000e+00	935.0
35	TraesCS4D01G165400	chr1D	94.186	172	9	1	8761	8931	285371004	285371175	2.560000e-65	261.0
36	TraesCS4D01G165400	chr1D	86.441	118	13	3	8934	9051	153028333	153028447	9.750000e-25	126.0
37	TraesCS4D01G165400	chr1D	95.000	40	2	0	9046	9085	39678846	39678807	7.750000e-06	63.9
38	TraesCS4D01G165400	chr1D	97.222	36	1	0	9039	9074	198279496	198279461	2.790000e-05	62.1
39	TraesCS4D01G165400	chr1D	92.683	41	3	0	9046	9086	284238270	284238230	1.000000e-04	60.2
40	TraesCS4D01G165400	chr1D	92.683	41	3	0	9046	9086	483907639	483907679	1.000000e-04	60.2
41	TraesCS4D01G165400	chr1D	92.500	40	3	0	9046	9085	83675544	83675583	3.610000e-04	58.4
42	TraesCS4D01G165400	chr5B	93.106	2263	124	7	3555	5794	330740033	330742286	0.000000e+00	3286.0
43	TraesCS4D01G165400	chr5B	91.218	2266	125	25	3555	5794	330741959	330744176	0.000000e+00	3014.0
44	TraesCS4D01G165400	chr5B	89.251	521	43	6	1	509	243742597	243742078	2.820000e-179	640.0
45	TraesCS4D01G165400	chr5B	90.610	213	17	3	8356	8565	64031355	64031567	7.070000e-71	279.0
46	TraesCS4D01G165400	chr5B	82.439	205	31	3	8764	8964	230783850	230783647	3.430000e-39	174.0
47	TraesCS4D01G165400	chr5B	93.103	58	4	0	1713	1770	26770452	26770509	1.650000e-12	86.1
48	TraesCS4D01G165400	chr5B	89.796	49	5	0	9046	9094	693583859	693583907	7.750000e-06	63.9
49	TraesCS4D01G165400	chr7A	92.287	2269	148	10	3552	5794	425786885	425789152	0.000000e+00	3195.0
50	TraesCS4D01G165400	chr7A	83.162	1170	189	7	6448	7613	638867211	638866046	0.000000e+00	1062.0
51	TraesCS4D01G165400	chr7A	86.902	397	46	5	3555	3949	165835304	165834912	3.060000e-119	440.0
52	TraesCS4D01G165400	chr7A	92.391	92	6	1	8934	9025	657019089	657019179	7.540000e-26	130.0
53	TraesCS4D01G165400	chr7A	89.899	99	8	2	8928	9025	166489299	166489396	9.750000e-25	126.0
54	TraesCS4D01G165400	chr7A	97.674	43	1	0	9046	9088	690421365	690421407	3.580000e-09	75.0
55	TraesCS4D01G165400	chr6A	92.084	2274	135	13	3554	5797	114233529	114231271	0.000000e+00	3160.0
56	TraesCS4D01G165400	chr6A	92.040	201	15	1	8353	8552	108891621	108891421	1.970000e-71	281.0
57	TraesCS4D01G165400	chr6A	89.498	219	19	4	8356	8572	326641400	326641184	3.290000e-69	274.0
58	TraesCS4D01G165400	chr6A	93.103	58	4	0	8709	8766	596589342	596589399	1.650000e-12	86.1
59	TraesCS4D01G165400	chr6A	95.349	43	2	0	9046	9088	334046015	334045973	1.670000e-07	69.4
60	TraesCS4D01G165400	chr1A	91.470	2286	146	17	3555	5794	99900498	99902780	0.000000e+00	3096.0
61	TraesCS4D01G165400	chr1A	91.063	414	20	4	5386	5794	292767109	292767510	2.270000e-150	544.0
62	TraesCS4D01G165400	chr1A	94.462	325	15	2	3555	3876	292767188	292767512	1.790000e-136	497.0
63	TraesCS4D01G165400	chr1A	95.000	40	2	0	9046	9085	351606801	351606762	7.750000e-06	63.9
64	TraesCS4D01G165400	chr3B	92.520	2139	137	10	3555	5680	647173354	647175482	0.000000e+00	3042.0
65	TraesCS4D01G165400	chr6D	94.070	1956	96	5	3851	5794	211667779	211665832	0.000000e+00	2952.0
66	TraesCS4D01G165400	chr6D	89.833	777	56	8	3553	4314	461315007	461314239	0.000000e+00	976.0
67	TraesCS4D01G165400	chr6D	95.122	41	2	0	9046	9086	464266224	464266184	2.160000e-06	65.8
68	TraesCS4D01G165400	chr6D	92.857	42	3	0	9046	9087	368755137	368755096	2.790000e-05	62.1
69	TraesCS4D01G165400	chr6D	92.683	41	1	2	9047	9086	375101170	375101131	3.610000e-04	58.4
70	TraesCS4D01G165400	chr6D	92.500	40	3	0	9046	9085	465968904	465968865	3.610000e-04	58.4
71	TraesCS4D01G165400	chr6D	90.476	42	4	0	9046	9087	91559573	91559532	1.000000e-03	56.5
72	TraesCS4D01G165400	chr1B	90.732	2212	122	20	3555	5724	175427372	175425202	0.000000e+00	2872.0
73	TraesCS4D01G165400	chr1B	88.462	78	7	2	8709	8786	172000057	172000132	9.890000e-15	93.5
74	TraesCS4D01G165400	chr1B	89.706	68	4	2	1696	1760	129175008	129174941	5.950000e-12	84.2
75	TraesCS4D01G165400	chr1B	93.182	44	3	0	9046	9089	606612865	606612822	2.160000e-06	65.8
76	TraesCS4D01G165400	chr1B	90.000	50	4	1	9046	9095	56752431	56752383	7.750000e-06	63.9
77	TraesCS4D01G165400	chr1B	93.023	43	3	0	9046	9088	654631622	654631664	7.750000e-06	63.9
78	TraesCS4D01G165400	chr2D	90.947	961	44	15	3551	4488	273002479	273001539	0.000000e+00	1253.0
79	TraesCS4D01G165400	chr2D	87.619	1050	96	14	3555	4575	29632908	29633952	0.000000e+00	1188.0
80	TraesCS4D01G165400	chr2D	95.652	322	14	0	3555	3876	361254018	361254339	1.380000e-142	518.0
81	TraesCS4D01G165400	chr2D	94.512	328	16	1	3555	3880	376694544	376694217	1.070000e-138	505.0
82	TraesCS4D01G165400	chr2D	94.785	326	11	4	3555	3876	409601894	409602217	3.850000e-138	503.0
83	TraesCS4D01G165400	chr2D	93.299	194	13	0	8356	8549	216156599	216156792	4.230000e-73	287.0
84	TraesCS4D01G165400	chr2D	91.803	61	3	2	1716	1775	556926473	556926414	5.950000e-12	84.2
85	TraesCS4D01G165400	chr2D	90.000	50	4	1	9037	9086	125325765	125325717	7.750000e-06	63.9
86	TraesCS4D01G165400	chr2D	85.455	55	6	2	9046	9099	646492396	646492343	1.000000e-03	56.5
87	TraesCS4D01G165400	chr7B	83.733	1168	186	4	6448	7613	599425205	599424040	0.000000e+00	1101.0
88	TraesCS4D01G165400	chr7B	84.783	138	16	5	8892	9025	94759138	94759002	5.830000e-27	134.0
89	TraesCS4D01G165400	chr7B	91.579	95	7	1	8931	9025	126893253	126893160	7.540000e-26	130.0
90	TraesCS4D01G165400	chr7B	86.066	122	13	3	8904	9025	48470267	48470384	2.710000e-25	128.0
91	TraesCS4D01G165400	chr7B	84.298	121	15	4	8912	9032	116502405	116502521	2.110000e-21	115.0
92	TraesCS4D01G165400	chr7B	94.828	58	2	1	8709	8766	599413404	599413460	1.280000e-13	89.8
93	TraesCS4D01G165400	chr7B	89.189	74	3	4	1695	1767	716275455	716275386	4.600000e-13	87.9
94	TraesCS4D01G165400	chr2B	87.771	924	93	10	3555	4459	795471375	795470453	0.000000e+00	1062.0
95	TraesCS4D01G165400	chr7D	83.048	1168	191	6	6448	7613	553222090	553220928	0.000000e+00	1053.0
96	TraesCS4D01G165400	chr7D	96.844	507	14	1	1	505	515813710	515814216	0.000000e+00	846.0
97	TraesCS4D01G165400	chr7D	95.181	166	8	0	8763	8928	5492210	5492045	7.120000e-66	263.0
98	TraesCS4D01G165400	chr7D	74.702	419	90	13	6503	6916	533986760	533987167	1.230000e-38	172.0
99	TraesCS4D01G165400	chr7D	92.308	65	3	2	1698	1760	433715531	433715467	3.560000e-14	91.6
100	TraesCS4D01G165400	chr7D	94.643	56	3	0	8711	8766	126648467	126648522	4.600000e-13	87.9
101	TraesCS4D01G165400	chr7D	90.625	64	4	1	1699	1760	83639049	83638986	5.950000e-12	84.2
102	TraesCS4D01G165400	chr7D	91.935	62	2	1	1699	1760	440985278	440985336	5.950000e-12	84.2
103	TraesCS4D01G165400	chr2A	94.695	509	10	6	1	501	611092383	611091884	0.000000e+00	774.0
104	TraesCS4D01G165400	chr2A	91.038	212	17	2	8356	8565	445388715	445388926	1.520000e-72	285.0
105	TraesCS4D01G165400	chr3D	90.419	501	14	8	1	501	608394076	608393610	6.090000e-176	628.0
106	TraesCS4D01G165400	chr3D	93.558	326	16	3	3551	3876	174054414	174054094	1.810000e-131	481.0
107	TraesCS4D01G165400	chr3D	93.814	194	12	0	8356	8549	109243090	109243283	9.080000e-75	292.0
108	TraesCS4D01G165400	chr3D	94.220	173	9	1	8760	8931	145972714	145972542	7.120000e-66	263.0
109	TraesCS4D01G165400	chr3D	93.103	58	4	0	8709	8766	260994305	260994248	1.650000e-12	86.1
110	TraesCS4D01G165400	chr3D	91.667	48	4	0	9046	9093	498872590	498872637	5.990000e-07	67.6
111	TraesCS4D01G165400	chr3D	95.122	41	2	0	9046	9086	267628961	267628921	2.160000e-06	65.8
112	TraesCS4D01G165400	chr6B	92.771	332	17	3	3555	3880	439354349	439354019	3.020000e-129	473.0
113	TraesCS4D01G165400	chr6B	95.181	166	8	0	8763	8928	147089439	147089604	7.120000e-66	263.0
114	TraesCS4D01G165400	chr6B	84.236	203	22	6	8764	8964	689088542	689088736	1.230000e-43	189.0
115	TraesCS4D01G165400	chr6B	92.308	65	2	2	1696	1760	626887478	626887417	1.280000e-13	89.8
116	TraesCS4D01G165400	chr6B	95.238	42	2	0	9046	9087	539706278	539706319	5.990000e-07	67.6
117	TraesCS4D01G165400	chr6B	93.182	44	3	0	9046	9089	299778593	299778550	2.160000e-06	65.8
118	TraesCS4D01G165400	chr5A	93.299	194	13	0	8356	8549	344613607	344613800	4.230000e-73	287.0
119	TraesCS4D01G165400	chr5A	85.308	211	22	7	8764	8969	452111763	452111557	9.410000e-50	209.0
120	TraesCS4D01G165400	chr3A	90.566	212	18	2	8356	8565	323626984	323627195	7.070000e-71	279.0
121	TraesCS4D01G165400	chr3A	89.302	215	20	3	8716	8929	477708377	477708165	5.500000e-67	267.0
122	TraesCS4D01G165400	chr3A	94.186	172	9	1	8761	8931	214611740	214611911	2.560000e-65	261.0
123	TraesCS4D01G165400	chr3A	79.151	259	46	7	8763	9019	454163772	454163520	1.230000e-38	172.0
124	TraesCS4D01G165400	chr5D	94.220	173	9	1	8760	8931	48983484	48983312	7.120000e-66	263.0
125	TraesCS4D01G165400	chr5D	86.408	206	21	6	8764	8968	460392860	460393059	1.560000e-52	219.0
126	TraesCS4D01G165400	chr5D	96.491	57	2	0	8710	8766	119492176	119492120	2.750000e-15	95.3
127	TraesCS4D01G165400	chr5D	95.122	41	2	0	9046	9086	51073325	51073285	2.160000e-06	65.8
128	TraesCS4D01G165400	chrUn	95.000	40	2	0	9046	9085	91247000	91246961	7.750000e-06	63.9
129	TraesCS4D01G165400	chrUn	92.683	41	3	0	9046	9086	245328096	245328136	1.000000e-04	60.2
130	TraesCS4D01G165400	chrUn	92.683	41	3	0	9046	9086	245339296	245339336	1.000000e-04	60.2
131	TraesCS4D01G165400	chrUn	92.500	40	3	0	9046	9085	27746604	27746565	3.610000e-04	58.4

These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

	query	scaffold	start	end	length	rev.comp	avg.bitscore	max.bitscore	avg.percent.identical	query.start	query.end	num_hsp	groupid	homo_length
0	TraesCS4D01G165400	chr4D	274458754	274468000	9246	False	17077.0	17077	100.000000	1	9247	1	chr4D.!!$F1	9246
1	TraesCS4D01G165400	chr4D	448522234	448524490	2256	False	3190.0	3190	92.358000	3554	5794	1	chr4D.!!$F2	2240
2	TraesCS4D01G165400	chr4D	286393865	286394633	768	True	368.0	368	75.573000	6503	7283	1	chr4D.!!$R5	780
3	TraesCS4D01G165400	chr4B	273617323	273623601	6278	True	1629.0	4863	94.553333	539	9247	6	chr4B.!!$R4	8708
4	TraesCS4D01G165400	chr4B	139941084	139942469	1385	False	1615.0	1615	87.687000	3760	5160	1	chr4B.!!$F1	1400
5	TraesCS4D01G165400	chr4B	276962610	276963387	777	False	385.0	385	75.849000	6503	7292	1	chr4B.!!$F2	789
6	TraesCS4D01G165400	chr4A	208820483	208827536	7053	False	1574.8	4241	93.888600	1568	9247	5	chr4A.!!$F7	7679
7	TraesCS4D01G165400	chr4A	208815045	208816084	1039	False	1515.0	1515	93.352000	555	1574	1	chr4A.!!$F3	1019
8	TraesCS4D01G165400	chr4A	207979101	207979887	786	True	374.0	374	75.498000	6503	7301	1	chr4A.!!$R1	798
9	TraesCS4D01G165400	chr1D	98828186	98832706	4520	True	3308.0	3314	93.305500	3555	5794	2	chr1D.!!$R4	2239
10	TraesCS4D01G165400	chr1D	199328709	199330964	2255	False	3216.0	3216	92.516000	3555	5794	1	chr1D.!!$F4	2239
11	TraesCS4D01G165400	chr1D	11323303	11324103	800	False	935.0	935	87.897000	3555	4360	1	chr1D.!!$F1	805
12	TraesCS4D01G165400	chr5B	330740033	330744176	4143	False	3150.0	3286	92.162000	3555	5794	2	chr5B.!!$F4	2239
13	TraesCS4D01G165400	chr5B	243742078	243742597	519	True	640.0	640	89.251000	1	509	1	chr5B.!!$R2	508
14	TraesCS4D01G165400	chr7A	425786885	425789152	2267	False	3195.0	3195	92.287000	3552	5794	1	chr7A.!!$F2	2242
15	TraesCS4D01G165400	chr7A	638866046	638867211	1165	True	1062.0	1062	83.162000	6448	7613	1	chr7A.!!$R2	1165
16	TraesCS4D01G165400	chr6A	114231271	114233529	2258	True	3160.0	3160	92.084000	3554	5797	1	chr6A.!!$R2	2243
17	TraesCS4D01G165400	chr1A	99900498	99902780	2282	False	3096.0	3096	91.470000	3555	5794	1	chr1A.!!$F1	2239
18	TraesCS4D01G165400	chr3B	647173354	647175482	2128	False	3042.0	3042	92.520000	3555	5680	1	chr3B.!!$F1	2125
19	TraesCS4D01G165400	chr6D	211665832	211667779	1947	True	2952.0	2952	94.070000	3851	5794	1	chr6D.!!$R2	1943
20	TraesCS4D01G165400	chr6D	461314239	461315007	768	True	976.0	976	89.833000	3553	4314	1	chr6D.!!$R5	761
21	TraesCS4D01G165400	chr1B	175425202	175427372	2170	True	2872.0	2872	90.732000	3555	5724	1	chr1B.!!$R3	2169
22	TraesCS4D01G165400	chr2D	273001539	273002479	940	True	1253.0	1253	90.947000	3551	4488	1	chr2D.!!$R2	937
23	TraesCS4D01G165400	chr2D	29632908	29633952	1044	False	1188.0	1188	87.619000	3555	4575	1	chr2D.!!$F1	1020
24	TraesCS4D01G165400	chr7B	599424040	599425205	1165	True	1101.0	1101	83.733000	6448	7613	1	chr7B.!!$R3	1165
25	TraesCS4D01G165400	chr2B	795470453	795471375	922	True	1062.0	1062	87.771000	3555	4459	1	chr2B.!!$R1	904
26	TraesCS4D01G165400	chr7D	553220928	553222090	1162	True	1053.0	1053	83.048000	6448	7613	1	chr7D.!!$R4	1165
27	TraesCS4D01G165400	chr7D	515813710	515814216	506	False	846.0	846	96.844000	1	505	1	chr7D.!!$F3	504

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
481	482	0.107017	ATCTTCCTGGCATCAACCGG	60.107	55.0	0.00	0.00	35.68	5.28	F
1561	1602	0.605319	GGGTGGTTCAATCTGCGACA	60.605	55.0	0.00	0.00	0.00	4.35	F
2120	2188	0.681887	TGGTGTTCTATCGCCGGAGA	60.682	55.0	11.31	11.31	40.48	3.71	F
2950	3018	1.136828	TACTCCACTGCCTGGTTTGT	58.863	50.0	0.00	0.00	41.52	2.83	F
3882	4360	0.815095	CCGGTTCCTACCAATTTGGC	59.185	55.0	15.49	0.00	45.31	4.52	F
4697	5238	0.246360	GCGACCAAATTTTCAGGGGG	59.754	55.0	0.00	0.00	0.00	5.40	F
5426	7844	0.253327	GTTGATCTTCCCCGCCTTCT	59.747	55.0	0.00	0.00	0.00	2.85	F
6131	8566	0.833287	TCCATAGTTCAGGCAGCTCC	59.167	55.0	0.00	0.00	0.00	4.70	F
7682	10318	0.178767	AGCCATGCGAGCAGATAACA	59.821	50.0	3.58	0.00	0.00	2.41	F

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
2032	2100	2.227865	TGAGCAACTTTGGCGGAAATAC	59.772	45.455	0.00	0.00	36.08	1.89	R
2950	3018	0.250295	CCACTCCAAAGCGAACTGGA	60.250	55.000	0.00	0.00	39.47	3.86	R
3707	3784	1.043673	GCTCCCTAAGGAAGCCGAGA	61.044	60.000	0.00	0.00	43.40	4.04	R
4649	5190	1.077716	CCAATTCAGGGGGTCGACC	60.078	63.158	27.04	27.04	39.11	4.79	R
5330	5871	0.464452	CGGGGTCCTCCTCAATGTAC	59.536	60.000	0.00	0.00	32.73	2.90	R
5775	8210	2.679429	AGTAGGAACCGGATCCCTAG	57.321	55.000	25.99	0.00	40.59	3.02	R
7114	9748	1.105457	CCTCAGCTCTCTGACTCTGG	58.895	60.000	0.00	0.00	43.95	3.86	R
8018	10654	0.247460	TCACCTGTGAAGCCAGATCG	59.753	55.000	0.00	0.00	36.53	3.69	R
8931	11583	0.033306	GGACGGAGAGGGGTAGAACT	60.033	60.000	0.00	0.00	0.00	3.01	R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
280	281	1.771073	TTGTCGTTGCAGTGAAGCCG	61.771	55.000	0.00	0.00	0.00	5.52
283	284	4.389576	GTTGCAGTGAAGCCGCGG	62.390	66.667	24.05	24.05	0.00	6.46
302	303	2.844839	GGCTACCTGGGCTCCGAT	60.845	66.667	0.00	0.00	0.00	4.18
303	304	2.423446	GCTACCTGGGCTCCGATG	59.577	66.667	0.00	0.00	0.00	3.84
304	305	2.423446	CTACCTGGGCTCCGATGC	59.577	66.667	0.00	0.00	0.00	3.91
305	306	2.364973	TACCTGGGCTCCGATGCA	60.365	61.111	0.00	0.00	34.04	3.96
331	332	4.694233	CTGCTGGTGCTGCGAGGT	62.694	66.667	0.00	0.00	40.48	3.85
332	333	4.687215	TGCTGGTGCTGCGAGGTC	62.687	66.667	0.00	0.00	40.48	3.85
335	336	3.573772	CTGGTGCTGCGAGGTCGAA	62.574	63.158	2.94	0.00	43.02	3.71
340	341	3.468007	CTGCGAGGTCGAAGCAAG	58.532	61.111	2.94	0.42	38.31	4.01
343	344	1.213013	GCGAGGTCGAAGCAAGAGA	59.787	57.895	2.94	0.00	43.02	3.10
344	345	0.800300	GCGAGGTCGAAGCAAGAGAG	60.800	60.000	2.94	0.00	43.02	3.20
345	346	0.179150	CGAGGTCGAAGCAAGAGAGG	60.179	60.000	0.00	0.00	43.02	3.69
346	347	0.174617	GAGGTCGAAGCAAGAGAGGG	59.825	60.000	0.00	0.00	0.00	4.30
348	349	1.448717	GTCGAAGCAAGAGAGGGGC	60.449	63.158	0.00	0.00	0.00	5.80
349	350	2.124942	CGAAGCAAGAGAGGGGCC	60.125	66.667	0.00	0.00	0.00	5.80
350	351	2.664081	CGAAGCAAGAGAGGGGCCT	61.664	63.158	0.84	0.00	0.00	5.19
351	352	1.077858	GAAGCAAGAGAGGGGCCTG	60.078	63.158	0.84	0.00	0.00	4.85
352	353	1.846712	GAAGCAAGAGAGGGGCCTGT	61.847	60.000	0.84	0.00	0.00	4.00
353	354	1.430369	AAGCAAGAGAGGGGCCTGTT	61.430	55.000	0.84	0.00	0.00	3.16
354	355	1.676967	GCAAGAGAGGGGCCTGTTG	60.677	63.158	0.84	0.00	39.55	3.33
355	356	1.763770	CAAGAGAGGGGCCTGTTGT	59.236	57.895	0.84	0.00	34.06	3.32
357	358	0.984995	AAGAGAGGGGCCTGTTGTAC	59.015	55.000	0.84	0.00	0.00	2.90
359	360	1.229082	AGAGGGGCCTGTTGTACGA	60.229	57.895	0.84	0.00	0.00	3.43
360	361	0.617820	AGAGGGGCCTGTTGTACGAT	60.618	55.000	0.84	0.00	0.00	3.73
361	362	0.462047	GAGGGGCCTGTTGTACGATG	60.462	60.000	0.84	0.00	0.00	3.84
362	363	2.112815	GGGGCCTGTTGTACGATGC	61.113	63.158	0.84	0.00	0.00	3.91
363	364	2.461110	GGGCCTGTTGTACGATGCG	61.461	63.158	0.84	0.00	0.00	4.73
364	365	1.447140	GGCCTGTTGTACGATGCGA	60.447	57.895	0.00	0.00	0.00	5.10
365	366	1.421410	GGCCTGTTGTACGATGCGAG	61.421	60.000	0.00	0.00	0.00	5.03
366	367	1.421410	GCCTGTTGTACGATGCGAGG	61.421	60.000	0.00	0.00	0.00	4.63
367	368	0.172578	CCTGTTGTACGATGCGAGGA	59.827	55.000	0.00	0.00	0.00	3.71
368	369	1.403647	CCTGTTGTACGATGCGAGGAA	60.404	52.381	0.00	0.00	0.00	3.36
369	370	1.920574	CTGTTGTACGATGCGAGGAAG	59.079	52.381	0.00	0.00	0.00	3.46
370	371	1.542472	TGTTGTACGATGCGAGGAAGA	59.458	47.619	0.00	0.00	0.00	2.87
371	372	2.186076	GTTGTACGATGCGAGGAAGAG	58.814	52.381	0.00	0.00	0.00	2.85
372	373	1.746470	TGTACGATGCGAGGAAGAGA	58.254	50.000	0.00	0.00	0.00	3.10
373	374	2.298610	TGTACGATGCGAGGAAGAGAT	58.701	47.619	0.00	0.00	0.00	2.75
374	375	2.290916	TGTACGATGCGAGGAAGAGATC	59.709	50.000	0.00	0.00	0.00	2.75
375	376	0.309302	ACGATGCGAGGAAGAGATCG	59.691	55.000	0.00	0.00	41.29	3.69
376	377	0.309302	CGATGCGAGGAAGAGATCGT	59.691	55.000	0.00	0.00	40.97	3.73
377	378	1.764851	GATGCGAGGAAGAGATCGTG	58.235	55.000	0.00	0.00	40.97	4.35
378	379	1.066303	GATGCGAGGAAGAGATCGTGT	59.934	52.381	0.00	0.00	40.97	4.49
380	381	0.171455	GCGAGGAAGAGATCGTGTGT	59.829	55.000	0.00	0.00	40.97	3.72
381	382	1.901538	CGAGGAAGAGATCGTGTGTG	58.098	55.000	0.00	0.00	34.30	3.82
383	384	0.109086	AGGAAGAGATCGTGTGTGCG	60.109	55.000	0.00	0.00	0.00	5.34
386	387	1.125021	GAAGAGATCGTGTGTGCGTTG	59.875	52.381	0.00	0.00	0.00	4.10
387	388	0.313987	AGAGATCGTGTGTGCGTTGA	59.686	50.000	0.00	0.00	0.00	3.18
388	389	0.435008	GAGATCGTGTGTGCGTTGAC	59.565	55.000	0.00	0.00	0.00	3.18
390	391	1.218875	GATCGTGTGTGCGTTGACCA	61.219	55.000	0.00	0.00	0.00	4.02
391	392	0.602638	ATCGTGTGTGCGTTGACCAT	60.603	50.000	0.00	0.00	0.00	3.55
392	393	1.082821	CGTGTGTGCGTTGACCATG	60.083	57.895	0.00	0.00	0.00	3.66
394	395	1.821332	TGTGTGCGTTGACCATGCA	60.821	52.632	0.00	0.00	45.78	3.96
398	399	1.965930	TGCGTTGACCATGCAGACC	60.966	57.895	0.00	0.00	42.91	3.85
399	400	1.965930	GCGTTGACCATGCAGACCA	60.966	57.895	0.00	0.00	37.36	4.02
401	402	1.878775	GTTGACCATGCAGACCAGC	59.121	57.895	0.00	0.00	0.00	4.85
402	403	0.607489	GTTGACCATGCAGACCAGCT	60.607	55.000	0.00	0.00	34.99	4.24
415	416	2.765699	AGACCAGCTGAGAGAAAGGATC	59.234	50.000	17.39	0.00	0.00	3.36
416	417	1.836802	ACCAGCTGAGAGAAAGGATCC	59.163	52.381	17.39	2.48	0.00	3.36
417	418	1.202510	CCAGCTGAGAGAAAGGATCCG	60.203	57.143	17.39	0.00	0.00	4.18
418	419	1.753649	CAGCTGAGAGAAAGGATCCGA	59.246	52.381	8.42	0.00	0.00	4.55
419	420	1.754226	AGCTGAGAGAAAGGATCCGAC	59.246	52.381	5.98	1.87	0.00	4.79
420	421	1.535015	GCTGAGAGAAAGGATCCGACG	60.535	57.143	5.98	0.00	0.00	5.12
421	422	1.066303	CTGAGAGAAAGGATCCGACGG	59.934	57.143	7.84	7.84	0.00	4.79
422	423	0.386113	GAGAGAAAGGATCCGACGGG	59.614	60.000	15.25	0.00	0.00	5.28
423	424	0.324460	AGAGAAAGGATCCGACGGGT	60.324	55.000	15.25	6.74	33.83	5.28
425	426	0.903454	AGAAAGGATCCGACGGGTGT	60.903	55.000	15.25	0.00	33.83	4.16
426	427	0.739813	GAAAGGATCCGACGGGTGTG	60.740	60.000	15.25	0.00	33.83	3.82
427	428	1.189524	AAAGGATCCGACGGGTGTGA	61.190	55.000	15.25	0.00	33.83	3.58
428	429	0.976073	AAGGATCCGACGGGTGTGAT	60.976	55.000	15.25	0.00	33.83	3.06
429	430	1.227263	GGATCCGACGGGTGTGATG	60.227	63.158	15.25	0.00	33.83	3.07
430	431	1.227263	GATCCGACGGGTGTGATGG	60.227	63.158	15.25	0.00	33.83	3.51
432	433	4.467084	CCGACGGGTGTGATGGGG	62.467	72.222	5.81	0.00	0.00	4.96
434	435	3.717294	GACGGGTGTGATGGGGCT	61.717	66.667	0.00	0.00	0.00	5.19
435	436	3.976701	GACGGGTGTGATGGGGCTG	62.977	68.421	0.00	0.00	0.00	4.85
436	437	3.716195	CGGGTGTGATGGGGCTGA	61.716	66.667	0.00	0.00	0.00	4.26
437	438	3.010144	GGGTGTGATGGGGCTGAT	58.990	61.111	0.00	0.00	0.00	2.90
438	439	1.152881	GGGTGTGATGGGGCTGATC	60.153	63.158	0.00	0.00	0.00	2.92
439	440	1.524621	GGTGTGATGGGGCTGATCG	60.525	63.158	0.00	0.00	0.00	3.69
440	441	1.522092	GTGTGATGGGGCTGATCGA	59.478	57.895	0.00	0.00	0.00	3.59
441	442	0.107703	GTGTGATGGGGCTGATCGAA	60.108	55.000	0.00	0.00	0.00	3.71
442	443	0.107703	TGTGATGGGGCTGATCGAAC	60.108	55.000	0.00	0.00	0.00	3.95
443	444	1.143838	TGATGGGGCTGATCGAACG	59.856	57.895	0.00	0.00	0.00	3.95
444	445	1.595382	GATGGGGCTGATCGAACGG	60.595	63.158	0.00	0.00	0.00	4.44
445	446	2.311688	GATGGGGCTGATCGAACGGT	62.312	60.000	3.26	0.00	0.00	4.83
446	447	2.202892	GGGGCTGATCGAACGGTC	60.203	66.667	3.26	0.00	0.00	4.79
447	448	2.577059	GGGCTGATCGAACGGTCA	59.423	61.111	8.46	9.72	0.00	4.02
449	450	1.519455	GGCTGATCGAACGGTCAGG	60.519	63.158	29.64	16.66	41.62	3.86
450	451	1.519455	GCTGATCGAACGGTCAGGG	60.519	63.158	29.64	13.78	41.62	4.45
451	452	1.945354	GCTGATCGAACGGTCAGGGA	61.945	60.000	29.64	2.98	41.62	4.20
453	454	1.320344	TGATCGAACGGTCAGGGAGG	61.320	60.000	6.06	0.00	0.00	4.30
455	456	4.796231	CGAACGGTCAGGGAGGCG	62.796	72.222	0.00	0.00	0.00	5.52
456	457	4.452733	GAACGGTCAGGGAGGCGG	62.453	72.222	0.00	0.00	0.00	6.13
460	461	3.081409	GGTCAGGGAGGCGGCTTA	61.081	66.667	14.76	0.00	0.00	3.09
461	462	2.666098	GGTCAGGGAGGCGGCTTAA	61.666	63.158	14.76	0.00	0.00	1.85
462	463	1.298667	GTCAGGGAGGCGGCTTAAA	59.701	57.895	14.76	0.00	0.00	1.52
464	465	0.180406	TCAGGGAGGCGGCTTAAATC	59.820	55.000	14.76	0.00	0.00	2.17
465	466	0.181350	CAGGGAGGCGGCTTAAATCT	59.819	55.000	14.76	3.85	0.00	2.40
466	467	0.919710	AGGGAGGCGGCTTAAATCTT	59.080	50.000	14.76	0.00	0.00	2.40
469	470	1.134068	GGAGGCGGCTTAAATCTTCCT	60.134	52.381	14.76	0.00	0.00	3.36
471	472	1.025041	GGCGGCTTAAATCTTCCTGG	58.975	55.000	0.00	0.00	0.00	4.45
473	474	1.750193	CGGCTTAAATCTTCCTGGCA	58.250	50.000	0.00	0.00	0.00	4.92
474	475	2.301346	CGGCTTAAATCTTCCTGGCAT	58.699	47.619	0.00	0.00	0.00	4.40
476	477	3.290710	GGCTTAAATCTTCCTGGCATCA	58.709	45.455	0.00	0.00	0.00	3.07
477	478	3.701040	GGCTTAAATCTTCCTGGCATCAA	59.299	43.478	0.00	0.00	0.00	2.57
479	480	4.440663	GCTTAAATCTTCCTGGCATCAACC	60.441	45.833	0.00	0.00	0.00	3.77
480	481	1.755179	AATCTTCCTGGCATCAACCG	58.245	50.000	0.00	0.00	0.00	4.44
481	482	0.107017	ATCTTCCTGGCATCAACCGG	60.107	55.000	0.00	0.00	35.68	5.28
484	485	0.893270	TTCCTGGCATCAACCGGTTG	60.893	55.000	36.52	36.52	41.71	3.77
494	495	2.852449	TCAACCGGTTGATTTGTAGCA	58.148	42.857	39.59	19.13	43.90	3.49
495	496	2.550606	TCAACCGGTTGATTTGTAGCAC	59.449	45.455	39.59	0.00	43.90	4.40
496	497	2.552315	CAACCGGTTGATTTGTAGCACT	59.448	45.455	38.61	0.00	42.93	4.40
497	498	2.151202	ACCGGTTGATTTGTAGCACTG	58.849	47.619	0.00	0.00	0.00	3.66
498	499	1.468520	CCGGTTGATTTGTAGCACTGG	59.531	52.381	0.00	0.00	0.00	4.00
499	500	1.135689	CGGTTGATTTGTAGCACTGGC	60.136	52.381	0.00	0.00	41.61	4.85
500	501	1.202348	GGTTGATTTGTAGCACTGGCC	59.798	52.381	0.00	0.00	42.56	5.36
501	502	2.162681	GTTGATTTGTAGCACTGGCCT	58.837	47.619	3.32	0.00	42.56	5.19
502	503	2.558359	GTTGATTTGTAGCACTGGCCTT	59.442	45.455	3.32	0.00	42.56	4.35
503	504	2.875296	TGATTTGTAGCACTGGCCTTT	58.125	42.857	3.32	0.00	42.56	3.11
504	505	3.230134	TGATTTGTAGCACTGGCCTTTT	58.770	40.909	3.32	0.00	42.56	2.27
505	506	4.402829	TGATTTGTAGCACTGGCCTTTTA	58.597	39.130	3.32	0.00	42.56	1.52
506	507	5.016173	TGATTTGTAGCACTGGCCTTTTAT	58.984	37.500	3.32	0.00	42.56	1.40
507	508	5.480073	TGATTTGTAGCACTGGCCTTTTATT	59.520	36.000	3.32	0.00	42.56	1.40
508	509	5.799827	TTTGTAGCACTGGCCTTTTATTT	57.200	34.783	3.32	0.00	42.56	1.40
509	510	5.799827	TTGTAGCACTGGCCTTTTATTTT	57.200	34.783	3.32	0.00	42.56	1.82
510	511	6.902771	TTGTAGCACTGGCCTTTTATTTTA	57.097	33.333	3.32	0.00	42.56	1.52
511	512	7.475137	TTGTAGCACTGGCCTTTTATTTTAT	57.525	32.000	3.32	0.00	42.56	1.40
513	514	6.661377	TGTAGCACTGGCCTTTTATTTTATCA	59.339	34.615	3.32	0.00	42.56	2.15
514	515	6.796785	AGCACTGGCCTTTTATTTTATCAT	57.203	33.333	3.32	0.00	42.56	2.45
515	516	6.809869	AGCACTGGCCTTTTATTTTATCATC	58.190	36.000	3.32	0.00	42.56	2.92
517	518	6.698766	GCACTGGCCTTTTATTTTATCATCAG	59.301	38.462	3.32	0.00	0.00	2.90
520	521	7.779798	ACTGGCCTTTTATTTTATCATCAGCTA	59.220	33.333	3.32	0.00	0.00	3.32
521	522	8.710749	TGGCCTTTTATTTTATCATCAGCTAT	57.289	30.769	3.32	0.00	0.00	2.97
522	523	9.146586	TGGCCTTTTATTTTATCATCAGCTATT	57.853	29.630	3.32	0.00	0.00	1.73
523	524	9.415544	GGCCTTTTATTTTATCATCAGCTATTG	57.584	33.333	0.00	0.00	0.00	1.90
524	525	9.971922	GCCTTTTATTTTATCATCAGCTATTGT	57.028	29.630	0.00	0.00	0.00	2.71
724	725	2.140717	CGTGTCTTTAAAGCCCGACTT	58.859	47.619	10.51	0.00	41.70	3.01
725	726	2.096417	CGTGTCTTTAAAGCCCGACTTG	60.096	50.000	10.51	0.00	39.09	3.16
727	728	1.199327	GTCTTTAAAGCCCGACTTGCC	59.801	52.381	10.51	0.00	39.09	4.52
728	729	1.073284	TCTTTAAAGCCCGACTTGCCT	59.927	47.619	10.51	0.00	39.09	4.75
741	751	2.015227	CTTGCCTCGCCTCTCTCTCC	62.015	65.000	0.00	0.00	0.00	3.71
836	848	3.828657	CAGCTGCTCTCTGCTTGTA	57.171	52.632	0.00	0.00	43.70	2.41
1110	1143	3.362797	TCTCGCGTCCTCGTTGCT	61.363	61.111	5.77	0.00	39.49	3.91
1561	1602	0.605319	GGGTGGTTCAATCTGCGACA	60.605	55.000	0.00	0.00	0.00	4.35
1633	1674	3.034635	CCTCCTCAGCAGTGGTTATACT	58.965	50.000	0.00	0.00	0.00	2.12
1635	1676	4.038162	CCTCCTCAGCAGTGGTTATACTAC	59.962	50.000	0.00	0.00	0.00	2.73
1637	1678	5.020795	TCCTCAGCAGTGGTTATACTACAA	58.979	41.667	0.00	0.00	31.42	2.41
1638	1679	5.661312	TCCTCAGCAGTGGTTATACTACAAT	59.339	40.000	0.00	0.00	31.42	2.71
1641	1682	7.600375	CCTCAGCAGTGGTTATACTACAATATG	59.400	40.741	0.00	0.00	31.42	1.78
1642	1683	8.245195	TCAGCAGTGGTTATACTACAATATGA	57.755	34.615	0.00	0.00	31.42	2.15
1643	1684	8.870116	TCAGCAGTGGTTATACTACAATATGAT	58.130	33.333	0.00	0.00	31.42	2.45
1644	1685	9.494271	CAGCAGTGGTTATACTACAATATGATT	57.506	33.333	0.00	0.00	31.42	2.57
1760	1827	9.151177	TCTTATATTTGTTTACGGAGGGAGTAT	57.849	33.333	0.00	0.00	0.00	2.12
1780	1847	5.751509	AGTATATTGTAATTCGCTCGCACAA	59.248	36.000	0.00	0.00	33.96	3.33
1885	1952	3.720601	ATCGCTGGGAGCTTGCCA	61.721	61.111	0.00	0.00	39.60	4.92
1941	2008	5.596772	CCTCTCAAAACTTAACCCCTTTTGA	59.403	40.000	0.00	0.00	40.11	2.69
2117	2185	1.082117	GTGTGGTGTTCTATCGCCGG	61.082	60.000	0.00	0.00	40.48	6.13
2120	2188	0.681887	TGGTGTTCTATCGCCGGAGA	60.682	55.000	11.31	11.31	40.48	3.71
2123	2191	2.351544	GGTGTTCTATCGCCGGAGATAC	60.352	54.545	22.30	16.49	32.39	2.24
2235	2303	6.539649	TTGAATAGTTGTTTTCTCTCACCG	57.460	37.500	0.00	0.00	0.00	4.94
2429	2497	5.890334	TGAACTCAAAGACAATGGTGAAAC	58.110	37.500	0.00	0.00	0.00	2.78
2451	2519	3.375299	CCCAACCATCTTTAGAAGCTTCG	59.625	47.826	20.43	6.77	0.00	3.79
2731	2799	1.342076	ACCAAGGCGAGGATAGTCAGA	60.342	52.381	5.26	0.00	0.00	3.27
2950	3018	1.136828	TACTCCACTGCCTGGTTTGT	58.863	50.000	0.00	0.00	41.52	2.83
3144	3212	4.199310	ACTGCAGAAAAGCAAGAACTACA	58.801	39.130	23.35	0.00	45.13	2.74
3244	3312	5.733676	TCGAAGGAGTTCATGATTCATTGA	58.266	37.500	11.02	7.36	32.36	2.57
3345	3413	6.705863	AGTGAAAGGGCTCAATATGAAATC	57.294	37.500	0.00	0.00	0.00	2.17
3519	3596	9.971922	CAAAGTCCAATTCTACTCAATTTTCTT	57.028	29.630	0.00	0.00	0.00	2.52
3845	4323	0.905357	CCACCCCTACAACCTGAGAG	59.095	60.000	0.00	0.00	0.00	3.20
3882	4360	0.815095	CCGGTTCCTACCAATTTGGC	59.185	55.000	15.49	0.00	45.31	4.52
3889	4367	5.067805	GGTTCCTACCAATTTGGCATTAGAG	59.932	44.000	15.49	3.76	42.67	2.43
3998	4494	3.953775	CCCCACTCTTGCCGGTGT	61.954	66.667	1.90	0.00	0.00	4.16
4082	4585	3.432051	GATCTCACCCAGGCGGTCG	62.432	68.421	0.00	0.00	43.58	4.79
4342	4883	3.253838	CCAGGTCCGGTTTCCCCA	61.254	66.667	0.00	0.00	0.00	4.96
4344	4885	3.647771	AGGTCCGGTTTCCCCAGC	61.648	66.667	0.00	0.00	0.00	4.85
4634	5175	3.147132	TCCAAGCTGGAGTTCGCA	58.853	55.556	0.00	0.00	42.67	5.10
4686	5227	0.313672	GCTCAACCAATGCGACCAAA	59.686	50.000	0.00	0.00	0.00	3.28
4697	5238	0.246360	GCGACCAAATTTTCAGGGGG	59.754	55.000	0.00	0.00	0.00	5.40
4739	5280	1.813859	CACCTGGATCGCCTCGTAA	59.186	57.895	0.00	0.00	34.31	3.18
4989	5530	2.881389	CTGAGCTCTTCGTCGGCT	59.119	61.111	16.19	0.00	39.16	5.52
5288	5829	1.731433	GCGATGAGCCCTACGTACCA	61.731	60.000	0.00	0.00	40.81	3.25
5404	5945	3.353836	CGTGGAGGTGTTTGGCGG	61.354	66.667	0.00	0.00	0.00	6.13
5426	7844	0.253327	GTTGATCTTCCCCGCCTTCT	59.747	55.000	0.00	0.00	0.00	2.85
5765	8200	1.938585	TCACCCCTACAACCTGAGAG	58.061	55.000	0.00	0.00	0.00	3.20
5794	8229	1.480869	GCTAGGGATCCGGTTCCTACT	60.481	57.143	26.93	19.58	35.97	2.57
5830	8265	5.710099	TCTTTGTCACTTTTCTTCTGGTGTT	59.290	36.000	0.00	0.00	0.00	3.32
5831	8266	5.975693	TTGTCACTTTTCTTCTGGTGTTT	57.024	34.783	0.00	0.00	0.00	2.83
5832	8267	5.975693	TGTCACTTTTCTTCTGGTGTTTT	57.024	34.783	0.00	0.00	0.00	2.43
5910	8345	5.697473	TGGTCATTCTTTAAACATGCGAA	57.303	34.783	0.00	0.00	0.00	4.70
5995	8430	2.771089	CAGTTTAACTGGCTGCTCTCA	58.229	47.619	16.62	0.00	42.35	3.27
6043	8478	8.001881	AGATTATCTCTAGTTCGAGCTTTTGA	57.998	34.615	7.22	3.83	30.26	2.69
6077	8512	6.292061	GCATTGTTCAAAATAGCACGTTTGAA	60.292	34.615	14.00	14.00	46.31	2.69
6130	8565	1.759445	TCTCCATAGTTCAGGCAGCTC	59.241	52.381	0.00	0.00	0.00	4.09
6131	8566	0.833287	TCCATAGTTCAGGCAGCTCC	59.167	55.000	0.00	0.00	0.00	4.70
6154	8589	5.220381	CGTCTGTTTAGTGCTCTACTTCAA	58.780	41.667	0.00	0.00	40.89	2.69
6343	8976	8.810990	TTGGTATTGTTTAATCCGTTATTCCT	57.189	30.769	0.00	0.00	0.00	3.36
6465	9099	5.497474	ACCAGGAATTGTATTACTTTCGCT	58.503	37.500	0.00	0.00	0.00	4.93
7310	9944	4.818534	AATAGTTTCAGTATGCCATGCG	57.181	40.909	0.00	0.00	34.76	4.73
7543	10179	2.805099	AGCACAGCTTTTCTTTCTCGAG	59.195	45.455	5.93	5.93	33.89	4.04
7682	10318	0.178767	AGCCATGCGAGCAGATAACA	59.821	50.000	3.58	0.00	0.00	2.41
7902	10538	2.453521	AGACAAGCACGAGGGTATGTA	58.546	47.619	0.00	0.00	0.00	2.29
7993	10629	3.698040	GTCCATGATGTTTCAGAGGCAAT	59.302	43.478	0.00	0.00	34.73	3.56
8018	10654	0.539669	AACCTGCTAACCTGCAACCC	60.540	55.000	0.00	0.00	42.83	4.11
8318	10957	9.631257	ACATTGTGGATGATCAATATTAAGTGA	57.369	29.630	0.00	0.00	39.15	3.41
8353	10992	4.926832	GGTCTTCAGCTTCAACTAGACTTC	59.073	45.833	0.00	0.00	34.08	3.01
8354	10993	4.926832	GTCTTCAGCTTCAACTAGACTTCC	59.073	45.833	0.00	0.00	31.63	3.46
8355	10994	3.963428	TCAGCTTCAACTAGACTTCCC	57.037	47.619	0.00	0.00	0.00	3.97
8356	10995	2.567615	TCAGCTTCAACTAGACTTCCCC	59.432	50.000	0.00	0.00	0.00	4.81
8357	10996	1.550976	AGCTTCAACTAGACTTCCCCG	59.449	52.381	0.00	0.00	0.00	5.73
8358	10997	1.275573	GCTTCAACTAGACTTCCCCGT	59.724	52.381	0.00	0.00	0.00	5.28
8359	10998	2.931320	GCTTCAACTAGACTTCCCCGTG	60.931	54.545	0.00	0.00	0.00	4.94
8360	10999	1.263356	TCAACTAGACTTCCCCGTGG	58.737	55.000	0.00	0.00	0.00	4.94
8361	11000	0.391263	CAACTAGACTTCCCCGTGGC	60.391	60.000	0.00	0.00	0.00	5.01
8362	11001	1.885163	AACTAGACTTCCCCGTGGCG	61.885	60.000	0.00	0.00	0.00	5.69
8363	11002	2.283388	TAGACTTCCCCGTGGCGT	60.283	61.111	0.00	0.00	0.00	5.68
8364	11003	1.885163	CTAGACTTCCCCGTGGCGTT	61.885	60.000	0.00	0.00	0.00	4.84
8365	11004	1.880819	TAGACTTCCCCGTGGCGTTC	61.881	60.000	0.00	0.00	0.00	3.95
8366	11005	3.524648	GACTTCCCCGTGGCGTTCA	62.525	63.158	0.00	0.00	0.00	3.18
8367	11006	2.281208	CTTCCCCGTGGCGTTCAA	60.281	61.111	0.00	0.00	0.00	2.69
8368	11007	1.894756	CTTCCCCGTGGCGTTCAAA	60.895	57.895	0.00	0.00	0.00	2.69
8369	11008	1.448922	CTTCCCCGTGGCGTTCAAAA	61.449	55.000	0.00	0.00	0.00	2.44
8370	11009	1.726533	TTCCCCGTGGCGTTCAAAAC	61.727	55.000	0.00	0.00	0.00	2.43
8371	11010	2.482333	CCCCGTGGCGTTCAAAACA	61.482	57.895	0.00	0.00	0.00	2.83
8372	11011	1.657556	CCCGTGGCGTTCAAAACAT	59.342	52.632	0.00	0.00	0.00	2.71
8373	11012	0.031449	CCCGTGGCGTTCAAAACATT	59.969	50.000	0.00	0.00	0.00	2.71
8374	11013	1.537135	CCCGTGGCGTTCAAAACATTT	60.537	47.619	0.00	0.00	0.00	2.32
8375	11014	2.197577	CCGTGGCGTTCAAAACATTTT	58.802	42.857	0.00	0.00	0.00	1.82
8376	11015	2.605366	CCGTGGCGTTCAAAACATTTTT	59.395	40.909	0.00	0.00	0.00	1.94
8377	11016	3.543070	CCGTGGCGTTCAAAACATTTTTG	60.543	43.478	5.22	5.22	0.00	2.44
8378	11017	3.304559	CGTGGCGTTCAAAACATTTTTGA	59.695	39.130	9.50	9.50	36.71	2.69
8379	11018	4.201628	CGTGGCGTTCAAAACATTTTTGAA	60.202	37.500	18.43	18.43	43.62	2.69
8380	11019	5.254842	GTGGCGTTCAAAACATTTTTGAAG	58.745	37.500	21.42	16.90	45.58	3.02
8381	11020	4.932200	TGGCGTTCAAAACATTTTTGAAGT	59.068	33.333	21.42	0.00	45.58	3.01
8382	11021	5.062809	TGGCGTTCAAAACATTTTTGAAGTC	59.937	36.000	21.42	17.46	45.58	3.01
8383	11022	5.290885	GGCGTTCAAAACATTTTTGAAGTCT	59.709	36.000	21.42	0.00	45.58	3.24
8384	11023	6.402816	GCGTTCAAAACATTTTTGAAGTCTC	58.597	36.000	21.42	12.13	45.58	3.36
8385	11024	6.618198	CGTTCAAAACATTTTTGAAGTCTCG	58.382	36.000	21.42	17.77	45.58	4.04
8386	11025	6.291060	CGTTCAAAACATTTTTGAAGTCTCGG	60.291	38.462	21.42	8.13	45.58	4.63
8387	11026	6.202516	TCAAAACATTTTTGAAGTCTCGGT	57.797	33.333	10.85	0.00	35.69	4.69
8388	11027	6.626302	TCAAAACATTTTTGAAGTCTCGGTT	58.374	32.000	10.85	0.00	35.69	4.44
8389	11028	6.750039	TCAAAACATTTTTGAAGTCTCGGTTC	59.250	34.615	10.85	0.00	35.69	3.62
8390	11029	6.451064	AAACATTTTTGAAGTCTCGGTTCT	57.549	33.333	0.00	0.00	0.00	3.01
8391	11030	7.562454	AAACATTTTTGAAGTCTCGGTTCTA	57.438	32.000	0.00	0.00	0.00	2.10
8392	11031	7.562454	AACATTTTTGAAGTCTCGGTTCTAA	57.438	32.000	0.00	0.00	0.00	2.10
8393	11032	7.562454	ACATTTTTGAAGTCTCGGTTCTAAA	57.438	32.000	0.00	0.00	30.23	1.85
8394	11033	7.415229	ACATTTTTGAAGTCTCGGTTCTAAAC	58.585	34.615	0.00	0.00	31.35	2.01
8407	11046	5.475273	GGTTCTAAACCGTAAAGTATGGC	57.525	43.478	0.00	0.00	42.62	4.40
8408	11047	4.033243	GGTTCTAAACCGTAAAGTATGGCG	59.967	45.833	0.00	0.00	42.62	5.69
8409	11048	3.189285	TCTAAACCGTAAAGTATGGCGC	58.811	45.455	0.00	0.00	38.45	6.53
8410	11049	1.810959	AAACCGTAAAGTATGGCGCA	58.189	45.000	10.83	0.00	38.45	6.09
8411	11050	2.032680	AACCGTAAAGTATGGCGCAT	57.967	45.000	10.83	3.40	38.45	4.73
8412	11051	2.032680	ACCGTAAAGTATGGCGCATT	57.967	45.000	10.83	0.00	38.45	3.56
8413	11052	3.182341	ACCGTAAAGTATGGCGCATTA	57.818	42.857	10.83	0.00	38.45	1.90
8414	11053	3.533547	ACCGTAAAGTATGGCGCATTAA	58.466	40.909	10.83	0.00	38.45	1.40
8415	11054	3.940221	ACCGTAAAGTATGGCGCATTAAA	59.060	39.130	10.83	0.00	38.45	1.52
8416	11055	4.201841	ACCGTAAAGTATGGCGCATTAAAC	60.202	41.667	10.83	0.00	38.45	2.01
8417	11056	4.034742	CCGTAAAGTATGGCGCATTAAACT	59.965	41.667	10.83	1.66	0.00	2.66
8418	11057	5.234757	CCGTAAAGTATGGCGCATTAAACTA	59.765	40.000	10.83	0.00	0.00	2.24
8419	11058	6.073440	CCGTAAAGTATGGCGCATTAAACTAT	60.073	38.462	10.83	0.00	0.00	2.12
8420	11059	7.007697	CGTAAAGTATGGCGCATTAAACTATC	58.992	38.462	10.83	0.00	0.00	2.08
8421	11060	6.935741	AAAGTATGGCGCATTAAACTATCA	57.064	33.333	10.83	0.00	0.00	2.15
8422	11061	6.935741	AAGTATGGCGCATTAAACTATCAA	57.064	33.333	10.83	0.00	0.00	2.57
8423	11062	6.545504	AGTATGGCGCATTAAACTATCAAG	57.454	37.500	10.83	0.00	0.00	3.02
8424	11063	6.055588	AGTATGGCGCATTAAACTATCAAGT	58.944	36.000	10.83	0.00	37.65	3.16
8425	11064	7.214381	AGTATGGCGCATTAAACTATCAAGTA	58.786	34.615	10.83	0.00	33.75	2.24
8426	11065	5.984233	TGGCGCATTAAACTATCAAGTAG	57.016	39.130	10.83	0.00	33.75	2.57
8427	11066	5.424757	TGGCGCATTAAACTATCAAGTAGT	58.575	37.500	10.83	0.00	45.56	2.73
8428	11067	5.522460	TGGCGCATTAAACTATCAAGTAGTC	59.478	40.000	10.83	0.00	42.83	2.59
8429	11068	5.522460	GGCGCATTAAACTATCAAGTAGTCA	59.478	40.000	10.83	0.00	42.83	3.41
8430	11069	6.202954	GGCGCATTAAACTATCAAGTAGTCAT	59.797	38.462	10.83	0.00	42.83	3.06
8431	11070	7.254795	GGCGCATTAAACTATCAAGTAGTCATT	60.255	37.037	10.83	0.00	42.83	2.57
8432	11071	8.761497	GCGCATTAAACTATCAAGTAGTCATTA	58.239	33.333	0.30	0.00	42.83	1.90
8440	11079	7.818642	ACTATCAAGTAGTCATTATACCGAGC	58.181	38.462	0.00	0.00	39.46	5.03
8441	11080	6.902771	ATCAAGTAGTCATTATACCGAGCT	57.097	37.500	0.00	0.00	0.00	4.09
8442	11081	6.710597	TCAAGTAGTCATTATACCGAGCTT	57.289	37.500	0.00	0.00	0.00	3.74
8443	11082	6.504398	TCAAGTAGTCATTATACCGAGCTTG	58.496	40.000	0.00	0.00	0.00	4.01
8444	11083	6.096423	TCAAGTAGTCATTATACCGAGCTTGT	59.904	38.462	0.00	0.00	33.53	3.16
8445	11084	6.074544	AGTAGTCATTATACCGAGCTTGTC	57.925	41.667	0.00	0.00	0.00	3.18
8446	11085	5.593095	AGTAGTCATTATACCGAGCTTGTCA	59.407	40.000	0.00	0.00	0.00	3.58
8447	11086	5.339008	AGTCATTATACCGAGCTTGTCAA	57.661	39.130	0.00	0.00	0.00	3.18
8448	11087	5.730550	AGTCATTATACCGAGCTTGTCAAA	58.269	37.500	0.00	0.00	0.00	2.69
8449	11088	5.581085	AGTCATTATACCGAGCTTGTCAAAC	59.419	40.000	0.00	0.00	0.00	2.93
8450	11089	4.565166	TCATTATACCGAGCTTGTCAAACG	59.435	41.667	0.00	0.00	0.00	3.60
8451	11090	2.450609	ATACCGAGCTTGTCAAACGT	57.549	45.000	0.00	0.00	0.00	3.99
8452	11091	2.228138	TACCGAGCTTGTCAAACGTT	57.772	45.000	0.00	0.00	0.00	3.99
8453	11092	0.935196	ACCGAGCTTGTCAAACGTTC	59.065	50.000	0.00	0.00	0.00	3.95
8454	11093	0.934496	CCGAGCTTGTCAAACGTTCA	59.066	50.000	0.00	0.00	0.00	3.18
8455	11094	1.531149	CCGAGCTTGTCAAACGTTCAT	59.469	47.619	0.00	0.00	0.00	2.57
8456	11095	2.734606	CCGAGCTTGTCAAACGTTCATA	59.265	45.455	0.00	0.00	0.00	2.15
8457	11096	3.185594	CCGAGCTTGTCAAACGTTCATAA	59.814	43.478	0.00	0.00	0.00	1.90
8458	11097	4.141680	CGAGCTTGTCAAACGTTCATAAC	58.858	43.478	0.00	0.00	0.00	1.89
8470	11109	3.310303	GTTCATAACGTCTGCATCTGC	57.690	47.619	0.00	0.00	42.50	4.26
8471	11110	2.932614	GTTCATAACGTCTGCATCTGCT	59.067	45.455	3.53	0.00	42.66	4.24
8472	11111	2.814269	TCATAACGTCTGCATCTGCTC	58.186	47.619	3.53	0.00	42.66	4.26
8473	11112	1.863454	CATAACGTCTGCATCTGCTCC	59.137	52.381	3.53	0.00	42.66	4.70
8474	11113	1.186200	TAACGTCTGCATCTGCTCCT	58.814	50.000	3.53	0.00	42.66	3.69
8475	11114	0.390866	AACGTCTGCATCTGCTCCTG	60.391	55.000	3.53	0.00	42.66	3.86
8476	11115	2.172372	CGTCTGCATCTGCTCCTGC	61.172	63.158	3.53	0.00	42.66	4.85
8492	11131	3.340814	CCTGCAATAGGTCTGTCACTT	57.659	47.619	0.00	0.00	42.00	3.16
8493	11132	4.471904	CCTGCAATAGGTCTGTCACTTA	57.528	45.455	0.00	0.00	42.00	2.24
8494	11133	4.832248	CCTGCAATAGGTCTGTCACTTAA	58.168	43.478	0.00	0.00	42.00	1.85
8495	11134	5.431765	CCTGCAATAGGTCTGTCACTTAAT	58.568	41.667	0.00	0.00	42.00	1.40
8496	11135	5.295292	CCTGCAATAGGTCTGTCACTTAATG	59.705	44.000	0.00	0.00	42.00	1.90
8497	11136	6.048732	TGCAATAGGTCTGTCACTTAATGA	57.951	37.500	0.00	0.00	33.79	2.57
8498	11137	6.653020	TGCAATAGGTCTGTCACTTAATGAT	58.347	36.000	0.00	0.00	40.28	2.45
8499	11138	6.539826	TGCAATAGGTCTGTCACTTAATGATG	59.460	38.462	0.00	0.00	40.28	3.07
8500	11139	6.512415	GCAATAGGTCTGTCACTTAATGATGC	60.512	42.308	0.00	0.00	40.28	3.91
8501	11140	4.558226	AGGTCTGTCACTTAATGATGCA	57.442	40.909	0.00	0.00	40.28	3.96
8502	11141	5.108187	AGGTCTGTCACTTAATGATGCAT	57.892	39.130	0.00	0.00	40.28	3.96
8503	11142	5.503927	AGGTCTGTCACTTAATGATGCATT	58.496	37.500	0.00	0.00	40.28	3.56
8504	11143	6.653020	AGGTCTGTCACTTAATGATGCATTA	58.347	36.000	0.00	0.00	40.28	1.90
8505	11144	7.112122	AGGTCTGTCACTTAATGATGCATTAA	58.888	34.615	0.00	10.97	41.93	1.40
8524	11163	7.970061	TGCATTAAGAACATAATTCTTCTGTGC	59.030	33.333	17.56	17.56	39.30	4.57
8525	11164	7.970061	GCATTAAGAACATAATTCTTCTGTGCA	59.030	33.333	18.55	0.00	38.57	4.57
8526	11165	9.499585	CATTAAGAACATAATTCTTCTGTGCAG	57.500	33.333	5.22	0.00	39.30	4.41
8527	11166	5.557891	AGAACATAATTCTTCTGTGCAGC	57.442	39.130	0.00	0.00	0.00	5.25
8528	11167	5.005740	AGAACATAATTCTTCTGTGCAGCA	58.994	37.500	0.00	0.00	0.00	4.41
8529	11168	5.474532	AGAACATAATTCTTCTGTGCAGCAA	59.525	36.000	0.00	0.00	0.00	3.91
8530	11169	5.909621	ACATAATTCTTCTGTGCAGCAAT	57.090	34.783	0.00	0.00	0.00	3.56
8531	11170	5.647589	ACATAATTCTTCTGTGCAGCAATG	58.352	37.500	0.00	0.00	0.00	2.82
8532	11171	5.416639	ACATAATTCTTCTGTGCAGCAATGA	59.583	36.000	0.00	0.00	0.00	2.57
8533	11172	4.436242	AATTCTTCTGTGCAGCAATGAG	57.564	40.909	0.00	0.00	0.00	2.90
8534	11173	2.845363	TCTTCTGTGCAGCAATGAGA	57.155	45.000	0.00	0.00	0.00	3.27
8535	11174	3.130280	TCTTCTGTGCAGCAATGAGAA	57.870	42.857	0.00	4.67	0.00	2.87
8536	11175	3.682696	TCTTCTGTGCAGCAATGAGAAT	58.317	40.909	11.43	0.00	0.00	2.40
8537	11176	4.835678	TCTTCTGTGCAGCAATGAGAATA	58.164	39.130	11.43	4.45	0.00	1.75
8538	11177	5.247862	TCTTCTGTGCAGCAATGAGAATAA	58.752	37.500	11.43	3.58	0.00	1.40
8539	11178	5.884232	TCTTCTGTGCAGCAATGAGAATAAT	59.116	36.000	11.43	0.00	0.00	1.28
8540	11179	5.746307	TCTGTGCAGCAATGAGAATAATC	57.254	39.130	0.00	0.00	0.00	1.75
8541	11180	4.577693	TCTGTGCAGCAATGAGAATAATCC	59.422	41.667	0.00	0.00	0.00	3.01
8542	11181	4.529897	TGTGCAGCAATGAGAATAATCCT	58.470	39.130	0.00	0.00	0.00	3.24
8543	11182	4.577693	TGTGCAGCAATGAGAATAATCCTC	59.422	41.667	0.00	0.00	0.00	3.71
8544	11183	4.577693	GTGCAGCAATGAGAATAATCCTCA	59.422	41.667	0.00	0.00	43.84	3.86
8545	11184	4.820173	TGCAGCAATGAGAATAATCCTCAG	59.180	41.667	0.00	0.00	43.07	3.35
8546	11185	5.061853	GCAGCAATGAGAATAATCCTCAGA	58.938	41.667	0.00	0.00	43.07	3.27
8547	11186	5.706369	GCAGCAATGAGAATAATCCTCAGAT	59.294	40.000	0.00	0.00	43.07	2.90
8724	11376	7.790314	AGTAGTAGCCAATTTATTACTCCCTCT	59.210	37.037	0.00	0.00	0.00	3.69
8735	11387	2.887151	ACTCCCTCTGTCCCAAAATG	57.113	50.000	0.00	0.00	0.00	2.32
8757	11409	7.948278	ATGAGTGTCTCAACTTTGTACTAAC	57.052	36.000	3.58	0.00	44.04	2.34
8760	11412	7.068348	TGAGTGTCTCAACTTTGTACTAACTCT	59.932	37.037	0.00	0.00	37.57	3.24
8762	11414	8.569641	AGTGTCTCAACTTTGTACTAACTCTAG	58.430	37.037	0.00	0.00	0.00	2.43
8763	11415	8.351461	GTGTCTCAACTTTGTACTAACTCTAGT	58.649	37.037	0.00	0.00	41.43	2.57
8764	11416	9.565090	TGTCTCAACTTTGTACTAACTCTAGTA	57.435	33.333	0.00	0.00	39.23	1.82
8773	11425	4.420522	ACTAACTCTAGTACTCCCTCCG	57.579	50.000	0.00	0.00	36.56	4.63
8774	11426	3.779738	ACTAACTCTAGTACTCCCTCCGT	59.220	47.826	0.00	0.00	36.56	4.69
8775	11427	3.735720	AACTCTAGTACTCCCTCCGTT	57.264	47.619	0.00	0.00	0.00	4.44
8776	11428	3.280197	ACTCTAGTACTCCCTCCGTTC	57.720	52.381	0.00	0.00	0.00	3.95
8778	11430	2.173143	CTCTAGTACTCCCTCCGTTCCT	59.827	54.545	0.00	0.00	0.00	3.36
8779	11431	3.387962	TCTAGTACTCCCTCCGTTCCTA	58.612	50.000	0.00	0.00	0.00	2.94
8780	11432	3.782523	TCTAGTACTCCCTCCGTTCCTAA	59.217	47.826	0.00	0.00	0.00	2.69
8781	11433	3.463048	AGTACTCCCTCCGTTCCTAAA	57.537	47.619	0.00	0.00	0.00	1.85
8784	11436	5.713807	AGTACTCCCTCCGTTCCTAAATAT	58.286	41.667	0.00	0.00	0.00	1.28
8785	11437	6.856757	AGTACTCCCTCCGTTCCTAAATATA	58.143	40.000	0.00	0.00	0.00	0.86
8786	11438	7.300658	AGTACTCCCTCCGTTCCTAAATATAA	58.699	38.462	0.00	0.00	0.00	0.98
8787	11439	6.667558	ACTCCCTCCGTTCCTAAATATAAG	57.332	41.667	0.00	0.00	0.00	1.73
8788	11440	6.141790	ACTCCCTCCGTTCCTAAATATAAGT	58.858	40.000	0.00	0.00	0.00	2.24
8789	11441	6.267242	ACTCCCTCCGTTCCTAAATATAAGTC	59.733	42.308	0.00	0.00	0.00	3.01
8790	11442	6.379579	TCCCTCCGTTCCTAAATATAAGTCT	58.620	40.000	0.00	0.00	0.00	3.24
8791	11443	6.842807	TCCCTCCGTTCCTAAATATAAGTCTT	59.157	38.462	0.00	0.00	0.00	3.01
8792	11444	7.346436	TCCCTCCGTTCCTAAATATAAGTCTTT	59.654	37.037	0.00	0.00	0.00	2.52
8793	11445	7.991460	CCCTCCGTTCCTAAATATAAGTCTTTT	59.009	37.037	0.00	0.00	0.00	2.27
8794	11446	9.392259	CCTCCGTTCCTAAATATAAGTCTTTTT	57.608	33.333	0.00	0.00	0.00	1.94
8811	11463	9.803315	AAGTCTTTTTAGAGGTTTCAAATGAAC	57.197	29.630	0.00	0.00	33.13	3.18
8812	11464	9.190317	AGTCTTTTTAGAGGTTTCAAATGAACT	57.810	29.630	0.00	0.00	33.13	3.01
8818	11470	8.740123	TTAGAGGTTTCAAATGAACTACAACA	57.260	30.769	0.00	0.00	33.13	3.33
8819	11471	7.823745	AGAGGTTTCAAATGAACTACAACAT	57.176	32.000	0.00	0.00	33.13	2.71
8820	11472	8.918202	AGAGGTTTCAAATGAACTACAACATA	57.082	30.769	0.00	0.00	33.13	2.29
8821	11473	9.520515	AGAGGTTTCAAATGAACTACAACATAT	57.479	29.630	0.00	0.00	33.13	1.78
8858	11510	9.737427	AGACATATTTTAGAGTGTAGATTCACG	57.263	33.333	0.00	0.00	42.40	4.35
8859	11511	8.354011	ACATATTTTAGAGTGTAGATTCACGC	57.646	34.615	0.00	0.00	42.40	5.34
8860	11512	7.979537	ACATATTTTAGAGTGTAGATTCACGCA	59.020	33.333	0.00	0.00	42.40	5.24
8861	11513	8.982685	CATATTTTAGAGTGTAGATTCACGCAT	58.017	33.333	0.00	0.00	42.40	4.73
8862	11514	7.849804	ATTTTAGAGTGTAGATTCACGCATT	57.150	32.000	0.00	0.00	42.40	3.56
8863	11515	7.667043	TTTTAGAGTGTAGATTCACGCATTT	57.333	32.000	0.00	0.00	42.40	2.32
8864	11516	7.667043	TTTAGAGTGTAGATTCACGCATTTT	57.333	32.000	0.00	0.00	42.40	1.82
8865	11517	5.536554	AGAGTGTAGATTCACGCATTTTG	57.463	39.130	0.00	0.00	42.40	2.44
8866	11518	4.083581	AGTGTAGATTCACGCATTTTGC	57.916	40.909	0.00	0.00	42.40	3.68
8867	11519	3.753272	AGTGTAGATTCACGCATTTTGCT	59.247	39.130	0.00	0.00	42.25	3.91
8868	11520	4.216257	AGTGTAGATTCACGCATTTTGCTT	59.784	37.500	0.00	0.00	42.25	3.91
8869	11521	4.554973	GTGTAGATTCACGCATTTTGCTTC	59.445	41.667	0.00	0.00	42.25	3.86
8870	11522	2.855180	AGATTCACGCATTTTGCTTCG	58.145	42.857	0.00	0.00	42.25	3.79
8871	11523	2.226437	AGATTCACGCATTTTGCTTCGT	59.774	40.909	0.00	0.00	42.25	3.85
8872	11524	3.435327	AGATTCACGCATTTTGCTTCGTA	59.565	39.130	0.00	0.00	42.25	3.43
8873	11525	3.822594	TTCACGCATTTTGCTTCGTAT	57.177	38.095	0.00	0.00	42.25	3.06
8874	11526	3.116063	TCACGCATTTTGCTTCGTATG	57.884	42.857	0.00	0.00	42.25	2.39
8875	11527	2.482336	TCACGCATTTTGCTTCGTATGT	59.518	40.909	0.00	0.00	42.25	2.29
8876	11528	3.680458	TCACGCATTTTGCTTCGTATGTA	59.320	39.130	0.00	0.00	42.25	2.29
8877	11529	4.021822	CACGCATTTTGCTTCGTATGTAG	58.978	43.478	0.00	0.00	42.25	2.74
8878	11530	3.682858	ACGCATTTTGCTTCGTATGTAGT	59.317	39.130	0.00	0.00	42.25	2.73
8879	11531	4.201685	ACGCATTTTGCTTCGTATGTAGTC	60.202	41.667	0.00	0.00	42.25	2.59
8880	11532	4.588278	GCATTTTGCTTCGTATGTAGTCC	58.412	43.478	0.00	0.00	40.96	3.85
8881	11533	4.495844	GCATTTTGCTTCGTATGTAGTCCC	60.496	45.833	0.00	0.00	40.96	4.46
8882	11534	4.546829	TTTTGCTTCGTATGTAGTCCCT	57.453	40.909	0.00	0.00	0.00	4.20
8883	11535	4.546829	TTTGCTTCGTATGTAGTCCCTT	57.453	40.909	0.00	0.00	0.00	3.95
8884	11536	3.520290	TGCTTCGTATGTAGTCCCTTG	57.480	47.619	0.00	0.00	0.00	3.61
8885	11537	2.829720	TGCTTCGTATGTAGTCCCTTGT	59.170	45.455	0.00	0.00	0.00	3.16
8886	11538	3.259876	TGCTTCGTATGTAGTCCCTTGTT	59.740	43.478	0.00	0.00	0.00	2.83
8887	11539	3.617263	GCTTCGTATGTAGTCCCTTGTTG	59.383	47.826	0.00	0.00	0.00	3.33
8888	11540	4.817517	CTTCGTATGTAGTCCCTTGTTGT	58.182	43.478	0.00	0.00	0.00	3.32
8889	11541	5.622914	GCTTCGTATGTAGTCCCTTGTTGTA	60.623	44.000	0.00	0.00	0.00	2.41
8890	11542	5.981088	TCGTATGTAGTCCCTTGTTGTAA	57.019	39.130	0.00	0.00	0.00	2.41
8891	11543	6.534475	TCGTATGTAGTCCCTTGTTGTAAT	57.466	37.500	0.00	0.00	0.00	1.89
8892	11544	6.567050	TCGTATGTAGTCCCTTGTTGTAATC	58.433	40.000	0.00	0.00	0.00	1.75
8893	11545	6.379133	TCGTATGTAGTCCCTTGTTGTAATCT	59.621	38.462	0.00	0.00	0.00	2.40
8894	11546	6.696148	CGTATGTAGTCCCTTGTTGTAATCTC	59.304	42.308	0.00	0.00	0.00	2.75
8895	11547	6.875972	ATGTAGTCCCTTGTTGTAATCTCT	57.124	37.500	0.00	0.00	0.00	3.10
8896	11548	7.973048	ATGTAGTCCCTTGTTGTAATCTCTA	57.027	36.000	0.00	0.00	0.00	2.43
8897	11549	7.786046	TGTAGTCCCTTGTTGTAATCTCTAA	57.214	36.000	0.00	0.00	0.00	2.10
8898	11550	8.197592	TGTAGTCCCTTGTTGTAATCTCTAAA	57.802	34.615	0.00	0.00	0.00	1.85
8899	11551	8.653191	TGTAGTCCCTTGTTGTAATCTCTAAAA	58.347	33.333	0.00	0.00	0.00	1.52
8900	11552	9.498176	GTAGTCCCTTGTTGTAATCTCTAAAAA	57.502	33.333	0.00	0.00	0.00	1.94
8901	11553	8.622948	AGTCCCTTGTTGTAATCTCTAAAAAG	57.377	34.615	0.00	0.00	0.00	2.27
8902	11554	8.437575	AGTCCCTTGTTGTAATCTCTAAAAAGA	58.562	33.333	0.00	0.00	0.00	2.52
8903	11555	8.504815	GTCCCTTGTTGTAATCTCTAAAAAGAC	58.495	37.037	0.00	0.00	0.00	3.01
8904	11556	8.437575	TCCCTTGTTGTAATCTCTAAAAAGACT	58.562	33.333	0.00	0.00	0.00	3.24
8905	11557	9.067986	CCCTTGTTGTAATCTCTAAAAAGACTT	57.932	33.333	0.00	0.00	0.00	3.01
8923	11575	8.581253	AAAGACTTATATTTGGAAACAGAGGG	57.419	34.615	0.00	0.00	44.54	4.30
8924	11576	7.510675	AGACTTATATTTGGAAACAGAGGGA	57.489	36.000	0.00	0.00	44.54	4.20
8925	11577	7.569240	AGACTTATATTTGGAAACAGAGGGAG	58.431	38.462	0.00	0.00	44.54	4.30
8926	11578	7.182930	AGACTTATATTTGGAAACAGAGGGAGT	59.817	37.037	0.00	0.00	44.54	3.85
8927	11579	8.388656	ACTTATATTTGGAAACAGAGGGAGTA	57.611	34.615	0.00	0.00	44.54	2.59
8928	11580	8.265764	ACTTATATTTGGAAACAGAGGGAGTAC	58.734	37.037	0.00	0.00	44.54	2.73
8929	11581	4.993705	ATTTGGAAACAGAGGGAGTACA	57.006	40.909	0.00	0.00	44.54	2.90
8930	11582	4.781775	TTTGGAAACAGAGGGAGTACAA	57.218	40.909	0.00	0.00	44.54	2.41
8931	11583	4.781775	TTGGAAACAGAGGGAGTACAAA	57.218	40.909	0.00	0.00	44.54	2.83
8932	11584	4.351874	TGGAAACAGAGGGAGTACAAAG	57.648	45.455	0.00	0.00	35.01	2.77
8933	11585	3.714798	TGGAAACAGAGGGAGTACAAAGT	59.285	43.478	0.00	0.00	35.01	2.66
8934	11586	4.165372	TGGAAACAGAGGGAGTACAAAGTT	59.835	41.667	0.00	0.00	35.01	2.66
8935	11587	4.755629	GGAAACAGAGGGAGTACAAAGTTC	59.244	45.833	0.00	0.00	0.00	3.01
8936	11588	5.454897	GGAAACAGAGGGAGTACAAAGTTCT	60.455	44.000	0.00	0.00	0.00	3.01
8937	11589	6.239515	GGAAACAGAGGGAGTACAAAGTTCTA	60.240	42.308	0.00	0.00	0.00	2.10
8938	11590	5.725325	ACAGAGGGAGTACAAAGTTCTAC	57.275	43.478	0.00	0.00	0.00	2.59
8939	11591	4.527427	ACAGAGGGAGTACAAAGTTCTACC	59.473	45.833	0.00	0.00	34.65	3.18
8940	11592	4.081586	CAGAGGGAGTACAAAGTTCTACCC	60.082	50.000	1.87	0.00	34.94	3.69
8941	11593	3.179685	AGGGAGTACAAAGTTCTACCCC	58.820	50.000	0.00	0.00	34.94	4.95
8942	11594	3.179685	GGGAGTACAAAGTTCTACCCCT	58.820	50.000	0.00	0.00	29.12	4.79
8943	11595	3.197333	GGGAGTACAAAGTTCTACCCCTC	59.803	52.174	0.00	0.00	29.12	4.30
8944	11596	4.095211	GGAGTACAAAGTTCTACCCCTCT	58.905	47.826	0.00	0.00	0.00	3.69
8945	11597	4.160065	GGAGTACAAAGTTCTACCCCTCTC	59.840	50.000	0.00	0.00	0.00	3.20
8946	11598	4.095211	AGTACAAAGTTCTACCCCTCTCC	58.905	47.826	0.00	0.00	0.00	3.71
8947	11599	1.900486	ACAAAGTTCTACCCCTCTCCG	59.100	52.381	0.00	0.00	0.00	4.63
8948	11600	1.900486	CAAAGTTCTACCCCTCTCCGT	59.100	52.381	0.00	0.00	0.00	4.69
8949	11601	1.849977	AAGTTCTACCCCTCTCCGTC	58.150	55.000	0.00	0.00	0.00	4.79
8950	11602	0.033306	AGTTCTACCCCTCTCCGTCC	60.033	60.000	0.00	0.00	0.00	4.79
8951	11603	1.077212	TTCTACCCCTCTCCGTCCG	60.077	63.158	0.00	0.00	0.00	4.79
8952	11604	1.565390	TTCTACCCCTCTCCGTCCGA	61.565	60.000	0.00	0.00	0.00	4.55
8953	11605	1.077212	CTACCCCTCTCCGTCCGAA	60.077	63.158	0.00	0.00	0.00	4.30
8954	11606	0.682209	CTACCCCTCTCCGTCCGAAA	60.682	60.000	0.00	0.00	0.00	3.46
8955	11607	0.251742	TACCCCTCTCCGTCCGAAAA	60.252	55.000	0.00	0.00	0.00	2.29
8956	11608	0.908180	ACCCCTCTCCGTCCGAAAAT	60.908	55.000	0.00	0.00	0.00	1.82
8957	11609	1.117150	CCCCTCTCCGTCCGAAAATA	58.883	55.000	0.00	0.00	0.00	1.40
8958	11610	1.202498	CCCCTCTCCGTCCGAAAATAC	60.202	57.143	0.00	0.00	0.00	1.89
8959	11611	1.755380	CCCTCTCCGTCCGAAAATACT	59.245	52.381	0.00	0.00	0.00	2.12
8960	11612	2.167900	CCCTCTCCGTCCGAAAATACTT	59.832	50.000	0.00	0.00	0.00	2.24
8961	11613	3.187700	CCTCTCCGTCCGAAAATACTTG	58.812	50.000	0.00	0.00	0.00	3.16
8962	11614	3.368116	CCTCTCCGTCCGAAAATACTTGT	60.368	47.826	0.00	0.00	0.00	3.16
8963	11615	3.841643	TCTCCGTCCGAAAATACTTGTC	58.158	45.455	0.00	0.00	0.00	3.18
8964	11616	3.256383	TCTCCGTCCGAAAATACTTGTCA	59.744	43.478	0.00	0.00	0.00	3.58
8965	11617	4.081862	TCTCCGTCCGAAAATACTTGTCAT	60.082	41.667	0.00	0.00	0.00	3.06
8966	11618	4.178540	TCCGTCCGAAAATACTTGTCATC	58.821	43.478	0.00	0.00	0.00	2.92
8967	11619	3.930229	CCGTCCGAAAATACTTGTCATCA	59.070	43.478	0.00	0.00	0.00	3.07
8968	11620	4.390603	CCGTCCGAAAATACTTGTCATCAA	59.609	41.667	0.00	0.00	0.00	2.57
8969	11621	5.106869	CCGTCCGAAAATACTTGTCATCAAA	60.107	40.000	0.00	0.00	32.87	2.69
8970	11622	6.367421	CGTCCGAAAATACTTGTCATCAAAA	58.633	36.000	0.00	0.00	32.87	2.44
8971	11623	7.021196	CGTCCGAAAATACTTGTCATCAAAAT	58.979	34.615	0.00	0.00	32.87	1.82
8972	11624	8.172484	CGTCCGAAAATACTTGTCATCAAAATA	58.828	33.333	0.00	0.00	32.87	1.40
8973	11625	9.490663	GTCCGAAAATACTTGTCATCAAAATAG	57.509	33.333	0.00	0.00	32.87	1.73
8974	11626	9.443323	TCCGAAAATACTTGTCATCAAAATAGA	57.557	29.630	0.00	0.00	32.87	1.98
9006	11658	9.339850	AGTGATGTATCTAGAACTACAATACGT	57.660	33.333	9.65	0.00	32.02	3.57
9007	11659	9.947669	GTGATGTATCTAGAACTACAATACGTT	57.052	33.333	9.65	0.00	32.02	3.99
9018	11670	9.578439	AGAACTACAATACGTTTAGTTACATCC	57.422	33.333	0.00	0.00	36.42	3.51
9019	11671	8.707938	AACTACAATACGTTTAGTTACATCCC	57.292	34.615	0.00	0.00	34.89	3.85
9020	11672	7.267857	ACTACAATACGTTTAGTTACATCCCC	58.732	38.462	0.00	0.00	0.00	4.81
9021	11673	6.303903	ACAATACGTTTAGTTACATCCCCT	57.696	37.500	0.00	0.00	0.00	4.79
9022	11674	6.714278	ACAATACGTTTAGTTACATCCCCTT	58.286	36.000	0.00	0.00	0.00	3.95
9023	11675	7.170277	ACAATACGTTTAGTTACATCCCCTTT	58.830	34.615	0.00	0.00	0.00	3.11
9024	11676	7.666804	ACAATACGTTTAGTTACATCCCCTTTT	59.333	33.333	0.00	0.00	0.00	2.27
9025	11677	5.952526	ACGTTTAGTTACATCCCCTTTTG	57.047	39.130	0.00	0.00	0.00	2.44
9026	11678	5.623169	ACGTTTAGTTACATCCCCTTTTGA	58.377	37.500	0.00	0.00	0.00	2.69
9027	11679	6.243148	ACGTTTAGTTACATCCCCTTTTGAT	58.757	36.000	0.00	0.00	0.00	2.57
9028	11680	6.150474	ACGTTTAGTTACATCCCCTTTTGATG	59.850	38.462	0.00	0.00	44.13	3.07
9044	11696	3.156288	TGATGTATCTAGACGGAGGGG	57.844	52.381	0.00	0.00	0.00	4.79
9052	11704	2.441001	TCTAGACGGAGGGGGTACTAAG	59.559	54.545	0.00	0.00	0.00	2.18
9053	11705	0.396835	AGACGGAGGGGGTACTAAGC	60.397	60.000	0.00	0.00	0.00	3.09
9076	11739	5.415701	GCTTGAGACACTTATTTTGGGATGA	59.584	40.000	0.00	0.00	0.00	2.92

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
285	286	2.844839	ATCGGAGCCCAGGTAGCC	60.845	66.667	0.00	0.00	0.00	3.93
286	287	2.423446	CATCGGAGCCCAGGTAGC	59.577	66.667	0.00	0.00	0.00	3.58
287	288	2.374830	CTGCATCGGAGCCCAGGTAG	62.375	65.000	0.00	0.00	0.00	3.18
288	289	2.364973	TGCATCGGAGCCCAGGTA	60.365	61.111	0.00	0.00	0.00	3.08
289	290	3.790437	CTGCATCGGAGCCCAGGT	61.790	66.667	0.00	0.00	0.00	4.00
315	316	4.687215	GACCTCGCAGCACCAGCA	62.687	66.667	0.00	0.00	45.49	4.41
317	318	3.573772	TTCGACCTCGCAGCACCAG	62.574	63.158	0.00	0.00	39.60	4.00
319	320	2.811317	CTTCGACCTCGCAGCACC	60.811	66.667	0.00	0.00	39.60	5.01
323	324	1.075425	CTCTTGCTTCGACCTCGCAG	61.075	60.000	0.00	0.00	39.60	5.18
324	325	1.080501	CTCTTGCTTCGACCTCGCA	60.081	57.895	0.00	0.00	39.60	5.10
325	326	0.800300	CTCTCTTGCTTCGACCTCGC	60.800	60.000	0.00	0.00	39.60	5.03
326	327	0.179150	CCTCTCTTGCTTCGACCTCG	60.179	60.000	0.00	0.00	41.45	4.63
327	328	0.174617	CCCTCTCTTGCTTCGACCTC	59.825	60.000	0.00	0.00	0.00	3.85
328	329	1.261238	CCCCTCTCTTGCTTCGACCT	61.261	60.000	0.00	0.00	0.00	3.85
329	330	1.219393	CCCCTCTCTTGCTTCGACC	59.781	63.158	0.00	0.00	0.00	4.79
330	331	1.448717	GCCCCTCTCTTGCTTCGAC	60.449	63.158	0.00	0.00	0.00	4.20
331	332	2.660064	GGCCCCTCTCTTGCTTCGA	61.660	63.158	0.00	0.00	0.00	3.71
332	333	2.124942	GGCCCCTCTCTTGCTTCG	60.125	66.667	0.00	0.00	0.00	3.79
333	334	1.077858	CAGGCCCCTCTCTTGCTTC	60.078	63.158	0.00	0.00	0.00	3.86
335	336	1.849823	AACAGGCCCCTCTCTTGCT	60.850	57.895	0.00	0.00	0.00	3.91
336	337	1.676967	CAACAGGCCCCTCTCTTGC	60.677	63.158	0.00	0.00	0.00	4.01
337	338	0.984230	TACAACAGGCCCCTCTCTTG	59.016	55.000	0.00	0.00	0.00	3.02
338	339	0.984995	GTACAACAGGCCCCTCTCTT	59.015	55.000	0.00	0.00	0.00	2.85
340	341	1.218316	CGTACAACAGGCCCCTCTC	59.782	63.158	0.00	0.00	0.00	3.20
343	344	1.602237	CATCGTACAACAGGCCCCT	59.398	57.895	0.00	0.00	0.00	4.79
344	345	2.112815	GCATCGTACAACAGGCCCC	61.113	63.158	0.00	0.00	0.00	5.80
345	346	2.461110	CGCATCGTACAACAGGCCC	61.461	63.158	0.00	0.00	0.00	5.80
346	347	1.421410	CTCGCATCGTACAACAGGCC	61.421	60.000	0.00	0.00	0.00	5.19
348	349	0.172578	TCCTCGCATCGTACAACAGG	59.827	55.000	0.00	0.00	0.00	4.00
349	350	1.920574	CTTCCTCGCATCGTACAACAG	59.079	52.381	0.00	0.00	0.00	3.16
350	351	1.542472	TCTTCCTCGCATCGTACAACA	59.458	47.619	0.00	0.00	0.00	3.33
351	352	2.159421	TCTCTTCCTCGCATCGTACAAC	60.159	50.000	0.00	0.00	0.00	3.32
352	353	2.089201	TCTCTTCCTCGCATCGTACAA	58.911	47.619	0.00	0.00	0.00	2.41
353	354	1.746470	TCTCTTCCTCGCATCGTACA	58.254	50.000	0.00	0.00	0.00	2.90
354	355	2.663334	CGATCTCTTCCTCGCATCGTAC	60.663	54.545	0.00	0.00	33.29	3.67
355	356	1.531578	CGATCTCTTCCTCGCATCGTA	59.468	52.381	0.00	0.00	33.29	3.43
357	358	0.309302	ACGATCTCTTCCTCGCATCG	59.691	55.000	0.00	0.00	41.67	3.84
359	360	1.107114	ACACGATCTCTTCCTCGCAT	58.893	50.000	0.00	0.00	38.42	4.73
360	361	0.171231	CACACGATCTCTTCCTCGCA	59.829	55.000	0.00	0.00	38.42	5.10
361	362	0.171455	ACACACGATCTCTTCCTCGC	59.829	55.000	0.00	0.00	38.42	5.03
362	363	1.901538	CACACACGATCTCTTCCTCG	58.098	55.000	0.00	0.00	40.62	4.63
363	364	1.634702	GCACACACGATCTCTTCCTC	58.365	55.000	0.00	0.00	0.00	3.71
364	365	0.109086	CGCACACACGATCTCTTCCT	60.109	55.000	0.00	0.00	34.06	3.36
365	366	0.388649	ACGCACACACGATCTCTTCC	60.389	55.000	0.00	0.00	36.70	3.46
366	367	1.125021	CAACGCACACACGATCTCTTC	59.875	52.381	0.00	0.00	36.70	2.87
367	368	1.139989	CAACGCACACACGATCTCTT	58.860	50.000	0.00	0.00	36.70	2.85
368	369	0.313987	TCAACGCACACACGATCTCT	59.686	50.000	0.00	0.00	36.70	3.10
369	370	0.435008	GTCAACGCACACACGATCTC	59.565	55.000	0.00	0.00	36.70	2.75
370	371	0.944311	GGTCAACGCACACACGATCT	60.944	55.000	0.00	0.00	36.70	2.75
371	372	1.218875	TGGTCAACGCACACACGATC	61.219	55.000	0.00	0.00	36.70	3.69
372	373	0.602638	ATGGTCAACGCACACACGAT	60.603	50.000	0.00	0.00	36.70	3.73
373	374	1.227409	ATGGTCAACGCACACACGA	60.227	52.632	0.00	0.00	36.70	4.35
374	375	1.082821	CATGGTCAACGCACACACG	60.083	57.895	0.00	0.00	39.50	4.49
375	376	1.370414	GCATGGTCAACGCACACAC	60.370	57.895	0.00	0.00	0.00	3.82
376	377	1.784036	CTGCATGGTCAACGCACACA	61.784	55.000	0.00	0.00	0.00	3.72
377	378	1.081906	CTGCATGGTCAACGCACAC	60.082	57.895	0.00	0.00	0.00	3.82
378	379	1.227793	TCTGCATGGTCAACGCACA	60.228	52.632	0.00	0.00	0.00	4.57
380	381	1.965930	GGTCTGCATGGTCAACGCA	60.966	57.895	0.00	0.00	0.00	5.24
381	382	1.915614	CTGGTCTGCATGGTCAACGC	61.916	60.000	0.00	0.00	0.00	4.84
383	384	0.607489	AGCTGGTCTGCATGGTCAAC	60.607	55.000	0.00	0.00	34.99	3.18
386	387	0.743701	CTCAGCTGGTCTGCATGGTC	60.744	60.000	15.13	0.00	42.56	4.02
387	388	1.196766	TCTCAGCTGGTCTGCATGGT	61.197	55.000	15.13	0.00	42.56	3.55
388	389	0.462225	CTCTCAGCTGGTCTGCATGG	60.462	60.000	15.13	0.00	42.56	3.66
390	391	1.273759	TTCTCTCAGCTGGTCTGCAT	58.726	50.000	15.13	0.00	42.56	3.96
391	392	1.001746	CTTTCTCTCAGCTGGTCTGCA	59.998	52.381	15.13	0.00	42.56	4.41
392	393	1.675415	CCTTTCTCTCAGCTGGTCTGC	60.675	57.143	15.13	0.00	42.56	4.26
394	395	2.317371	TCCTTTCTCTCAGCTGGTCT	57.683	50.000	15.13	0.00	0.00	3.85
395	396	2.158971	GGATCCTTTCTCTCAGCTGGTC	60.159	54.545	15.13	0.00	0.00	4.02
396	397	1.836802	GGATCCTTTCTCTCAGCTGGT	59.163	52.381	15.13	0.00	0.00	4.00
398	399	1.753649	TCGGATCCTTTCTCTCAGCTG	59.246	52.381	7.63	7.63	0.00	4.24
399	400	1.754226	GTCGGATCCTTTCTCTCAGCT	59.246	52.381	10.75	0.00	0.00	4.24
401	402	1.066303	CCGTCGGATCCTTTCTCTCAG	59.934	57.143	4.91	0.00	0.00	3.35
402	403	1.103803	CCGTCGGATCCTTTCTCTCA	58.896	55.000	4.91	0.00	0.00	3.27
405	406	0.179108	CACCCGTCGGATCCTTTCTC	60.179	60.000	14.39	0.00	0.00	2.87
406	407	0.903454	ACACCCGTCGGATCCTTTCT	60.903	55.000	14.39	0.00	0.00	2.52
407	408	0.739813	CACACCCGTCGGATCCTTTC	60.740	60.000	14.39	0.00	0.00	2.62
408	409	1.189524	TCACACCCGTCGGATCCTTT	61.190	55.000	14.39	0.00	0.00	3.11
409	410	0.976073	ATCACACCCGTCGGATCCTT	60.976	55.000	14.39	0.00	0.00	3.36
410	411	1.381327	ATCACACCCGTCGGATCCT	60.381	57.895	14.39	0.00	0.00	3.24
411	412	1.227263	CATCACACCCGTCGGATCC	60.227	63.158	14.39	0.00	0.00	3.36
415	416	4.467084	CCCCATCACACCCGTCGG	62.467	72.222	3.60	3.60	0.00	4.79
417	418	3.717294	AGCCCCATCACACCCGTC	61.717	66.667	0.00	0.00	0.00	4.79
418	419	4.033776	CAGCCCCATCACACCCGT	62.034	66.667	0.00	0.00	0.00	5.28
419	420	2.947938	GATCAGCCCCATCACACCCG	62.948	65.000	0.00	0.00	0.00	5.28
420	421	1.152881	GATCAGCCCCATCACACCC	60.153	63.158	0.00	0.00	0.00	4.61
421	422	1.524621	CGATCAGCCCCATCACACC	60.525	63.158	0.00	0.00	0.00	4.16
422	423	0.107703	TTCGATCAGCCCCATCACAC	60.108	55.000	0.00	0.00	0.00	3.82
423	424	0.107703	GTTCGATCAGCCCCATCACA	60.108	55.000	0.00	0.00	0.00	3.58
425	426	1.143838	CGTTCGATCAGCCCCATCA	59.856	57.895	0.00	0.00	0.00	3.07
426	427	1.595382	CCGTTCGATCAGCCCCATC	60.595	63.158	0.00	0.00	0.00	3.51
427	428	2.311688	GACCGTTCGATCAGCCCCAT	62.312	60.000	0.00	0.00	0.00	4.00
428	429	3.000819	ACCGTTCGATCAGCCCCA	61.001	61.111	0.00	0.00	0.00	4.96
429	430	2.202892	GACCGTTCGATCAGCCCC	60.203	66.667	0.00	0.00	0.00	5.80
430	431	1.519455	CTGACCGTTCGATCAGCCC	60.519	63.158	3.59	0.00	36.22	5.19
432	433	1.519455	CCCTGACCGTTCGATCAGC	60.519	63.158	10.69	0.00	40.92	4.26
434	435	1.320344	CCTCCCTGACCGTTCGATCA	61.320	60.000	0.00	0.00	0.00	2.92
435	436	1.437986	CCTCCCTGACCGTTCGATC	59.562	63.158	0.00	0.00	0.00	3.69
436	437	2.722201	GCCTCCCTGACCGTTCGAT	61.722	63.158	0.00	0.00	0.00	3.59
437	438	3.379445	GCCTCCCTGACCGTTCGA	61.379	66.667	0.00	0.00	0.00	3.71
438	439	4.796231	CGCCTCCCTGACCGTTCG	62.796	72.222	0.00	0.00	0.00	3.95
439	440	4.452733	CCGCCTCCCTGACCGTTC	62.453	72.222	0.00	0.00	0.00	3.95
443	444	2.193087	TTTAAGCCGCCTCCCTGACC	62.193	60.000	0.00	0.00	0.00	4.02
444	445	0.107165	ATTTAAGCCGCCTCCCTGAC	60.107	55.000	0.00	0.00	0.00	3.51
445	446	0.180406	GATTTAAGCCGCCTCCCTGA	59.820	55.000	0.00	0.00	0.00	3.86
446	447	0.181350	AGATTTAAGCCGCCTCCCTG	59.819	55.000	0.00	0.00	0.00	4.45
447	448	0.919710	AAGATTTAAGCCGCCTCCCT	59.080	50.000	0.00	0.00	0.00	4.20
449	450	1.134068	AGGAAGATTTAAGCCGCCTCC	60.134	52.381	0.00	0.00	0.00	4.30
450	451	1.943340	CAGGAAGATTTAAGCCGCCTC	59.057	52.381	0.00	0.00	0.00	4.70
451	452	1.408822	CCAGGAAGATTTAAGCCGCCT	60.409	52.381	0.00	0.00	0.00	5.52
453	454	0.382158	GCCAGGAAGATTTAAGCCGC	59.618	55.000	0.00	0.00	0.00	6.53
455	456	3.290710	TGATGCCAGGAAGATTTAAGCC	58.709	45.455	0.00	0.00	0.00	4.35
456	457	4.440663	GGTTGATGCCAGGAAGATTTAAGC	60.441	45.833	0.00	0.00	0.00	3.09
459	460	3.278574	CGGTTGATGCCAGGAAGATTTA	58.721	45.455	0.00	0.00	0.00	1.40
460	461	2.094675	CGGTTGATGCCAGGAAGATTT	58.905	47.619	0.00	0.00	0.00	2.17
461	462	1.683011	CCGGTTGATGCCAGGAAGATT	60.683	52.381	0.00	0.00	0.00	2.40
462	463	0.107017	CCGGTTGATGCCAGGAAGAT	60.107	55.000	0.00	0.00	0.00	2.40
464	465	0.609131	AACCGGTTGATGCCAGGAAG	60.609	55.000	21.56	0.00	0.00	3.46
465	466	0.893270	CAACCGGTTGATGCCAGGAA	60.893	55.000	38.61	0.00	42.93	3.36
466	467	1.303236	CAACCGGTTGATGCCAGGA	60.303	57.895	38.61	0.00	42.93	3.86
476	477	2.552315	CAGTGCTACAAATCAACCGGTT	59.448	45.455	15.86	15.86	0.00	4.44
477	478	2.151202	CAGTGCTACAAATCAACCGGT	58.849	47.619	0.00	0.00	0.00	5.28
479	480	1.135689	GCCAGTGCTACAAATCAACCG	60.136	52.381	0.00	0.00	33.53	4.44
480	481	1.202348	GGCCAGTGCTACAAATCAACC	59.798	52.381	0.00	0.00	37.74	3.77
481	482	2.162681	AGGCCAGTGCTACAAATCAAC	58.837	47.619	5.01	0.00	37.74	3.18
484	485	3.942130	AAAAGGCCAGTGCTACAAATC	57.058	42.857	5.01	0.00	37.74	2.17
486	487	5.799827	AAATAAAAGGCCAGTGCTACAAA	57.200	34.783	5.01	0.00	37.74	2.83
487	488	5.799827	AAAATAAAAGGCCAGTGCTACAA	57.200	34.783	5.01	0.00	37.74	2.41
488	489	6.661377	TGATAAAATAAAAGGCCAGTGCTACA	59.339	34.615	5.01	0.00	37.74	2.74
489	490	7.095695	TGATAAAATAAAAGGCCAGTGCTAC	57.904	36.000	5.01	0.00	37.74	3.58
490	491	7.559533	TGATGATAAAATAAAAGGCCAGTGCTA	59.440	33.333	5.01	0.00	37.74	3.49
491	492	6.380846	TGATGATAAAATAAAAGGCCAGTGCT	59.619	34.615	5.01	0.00	37.74	4.40
492	493	6.572519	TGATGATAAAATAAAAGGCCAGTGC	58.427	36.000	5.01	0.00	0.00	4.40
493	494	6.698766	GCTGATGATAAAATAAAAGGCCAGTG	59.301	38.462	5.01	0.00	0.00	3.66
494	495	6.608808	AGCTGATGATAAAATAAAAGGCCAGT	59.391	34.615	5.01	0.00	0.00	4.00
495	496	7.047460	AGCTGATGATAAAATAAAAGGCCAG	57.953	36.000	5.01	0.00	0.00	4.85
496	497	8.710749	ATAGCTGATGATAAAATAAAAGGCCA	57.289	30.769	5.01	0.00	0.00	5.36
497	498	9.415544	CAATAGCTGATGATAAAATAAAAGGCC	57.584	33.333	0.00	0.00	0.00	5.19
498	499	9.971922	ACAATAGCTGATGATAAAATAAAAGGC	57.028	29.630	0.00	0.00	0.00	4.35
574	575	5.394005	GCCATGTGATTGGTTTTATGCACTA	60.394	40.000	0.00	0.00	39.11	2.74
724	725	2.441164	GGAGAGAGAGGCGAGGCA	60.441	66.667	0.00	0.00	0.00	4.75
725	726	3.223589	GGGAGAGAGAGGCGAGGC	61.224	72.222	0.00	0.00	0.00	4.70
727	728	2.904866	CGGGGAGAGAGAGGCGAG	60.905	72.222	0.00	0.00	0.00	5.03
728	729	3.700831	GACGGGGAGAGAGAGGCGA	62.701	68.421	0.00	0.00	0.00	5.54
741	751	2.043450	AGAGGAGGCAGAGACGGG	60.043	66.667	0.00	0.00	0.00	5.28
1307	1340	3.590824	CCATCAAACTCGTGGGGC	58.409	61.111	0.00	0.00	0.00	5.80
1415	1448	3.698765	CCAAATCTGGGCCACCAC	58.301	61.111	0.00	0.00	43.37	4.16
1633	1674	5.574891	AAGGCAACGCAAATCATATTGTA	57.425	34.783	0.00	0.00	46.39	2.41
1635	1676	7.467557	AATAAAGGCAACGCAAATCATATTG	57.532	32.000	0.00	0.00	46.39	1.90
1637	1678	6.018832	GCAAATAAAGGCAACGCAAATCATAT	60.019	34.615	0.00	0.00	46.39	1.78
1638	1679	5.290643	GCAAATAAAGGCAACGCAAATCATA	59.709	36.000	0.00	0.00	46.39	2.15
1641	1682	3.679502	AGCAAATAAAGGCAACGCAAATC	59.320	39.130	0.00	0.00	46.39	2.17
1642	1683	3.663025	AGCAAATAAAGGCAACGCAAAT	58.337	36.364	0.00	0.00	46.39	2.32
1643	1684	3.104843	AGCAAATAAAGGCAACGCAAA	57.895	38.095	0.00	0.00	46.39	3.68
1644	1685	2.810439	AGCAAATAAAGGCAACGCAA	57.190	40.000	0.00	0.00	46.39	4.85
1760	1827	5.176774	CCTATTGTGCGAGCGAATTACAATA	59.823	40.000	13.52	13.52	40.96	1.90
1780	1847	4.021981	GCTCCAAAAGTCAACAAAGCCTAT	60.022	41.667	0.00	0.00	0.00	2.57
1885	1952	4.332268	ACAATTTGCAAAACGCTTGTTCAT	59.668	33.333	17.19	0.00	43.06	2.57
1941	2008	3.325135	AGACTGAGGACGAAATGGTTTCT	59.675	43.478	0.00	0.00	37.52	2.52
2032	2100	2.227865	TGAGCAACTTTGGCGGAAATAC	59.772	45.455	0.00	0.00	36.08	1.89
2220	2288	3.134081	AGGACTTCGGTGAGAGAAAACAA	59.866	43.478	0.00	0.00	0.00	2.83
2235	2303	6.254589	CGTTAACAGATCTCATTCAGGACTTC	59.745	42.308	6.39	0.00	0.00	3.01
2429	2497	3.375299	CGAAGCTTCTAAAGATGGTTGGG	59.625	47.826	23.50	0.00	39.14	4.12
2451	2519	8.543862	TGTCATATATCACATCTGAAGCAATC	57.456	34.615	0.00	0.00	0.00	2.67
2731	2799	6.078456	TCTGATTGGGTAAATTGAGGTCAT	57.922	37.500	0.00	0.00	0.00	3.06
2950	3018	0.250295	CCACTCCAAAGCGAACTGGA	60.250	55.000	0.00	0.00	39.47	3.86
3102	3170	4.209288	CAGTCCGACCATCTTTTATAAGCG	59.791	45.833	0.00	0.00	0.00	4.68
3144	3212	2.362077	GCGTTCCCCAATAATGCATCTT	59.638	45.455	0.00	0.00	38.47	2.40
3244	3312	2.695359	ACATTTGCAACGTACCTCGAT	58.305	42.857	0.00	0.00	42.86	3.59
3345	3413	4.041815	AGAACTCATCTGATCATGGGGATG	59.958	45.833	13.78	13.78	36.88	3.51
3430	3499	3.751175	TGAGGAAAACAAATCTAGCCACG	59.249	43.478	0.00	0.00	0.00	4.94
3548	3625	1.847328	TGCCGGTCATAACAGAGAGA	58.153	50.000	1.90	0.00	0.00	3.10
3549	3626	2.898729	ATGCCGGTCATAACAGAGAG	57.101	50.000	1.90	0.00	32.59	3.20
3550	3627	4.955811	AATATGCCGGTCATAACAGAGA	57.044	40.909	18.34	1.54	40.73	3.10
3551	3628	5.171476	CCTAATATGCCGGTCATAACAGAG	58.829	45.833	18.34	13.41	40.73	3.35
3697	3774	6.148480	CCTAAGGAAGCCGAGAAAATATGATG	59.852	42.308	0.00	0.00	0.00	3.07
3707	3784	1.043673	GCTCCCTAAGGAAGCCGAGA	61.044	60.000	0.00	0.00	43.40	4.04
3882	4360	3.510388	TCACACCGAAGCTCTCTAATG	57.490	47.619	0.00	0.00	0.00	1.90
3889	4367	1.929836	GACATGATCACACCGAAGCTC	59.070	52.381	0.00	0.00	0.00	4.09
3998	4494	3.822192	CGCGATGGAGGTGACCGA	61.822	66.667	0.00	0.00	0.00	4.69
4082	4585	4.166011	GAACGTGCAGATGCCCGC	62.166	66.667	9.60	0.00	45.53	6.13
4602	5143	4.951963	GGAGAATCTCGGCGGCGG	62.952	72.222	31.73	21.26	33.73	6.13
4634	5175	3.273080	GACCGTGCCGTCGTAGGTT	62.273	63.158	0.00	0.00	35.00	3.50
4649	5190	1.077716	CCAATTCAGGGGGTCGACC	60.078	63.158	27.04	27.04	39.11	4.79
4686	5227	3.070576	GCGCTGCCCCCTGAAAAT	61.071	61.111	0.00	0.00	0.00	1.82
4739	5280	3.532155	GCGGCTCCTCGGAGATGT	61.532	66.667	16.92	0.00	44.53	3.06
4965	5506	2.775856	CGAAGAGCTCAGCCCGCTA	61.776	63.158	17.77	0.00	37.96	4.26
4989	5530	2.363975	GGATGTGGTCCGGTAGGCA	61.364	63.158	0.00	0.00	37.23	4.75
5330	5871	0.464452	CGGGGTCCTCCTCAATGTAC	59.536	60.000	0.00	0.00	32.73	2.90
5404	5945	3.202706	GCGGGGAAGATCAACGGC	61.203	66.667	0.00	0.00	0.00	5.68
5775	8210	2.679429	AGTAGGAACCGGATCCCTAG	57.321	55.000	25.99	0.00	40.59	3.02
5794	8229	5.854010	AGTGACAAAGACAAGTGAGAGTA	57.146	39.130	0.00	0.00	0.00	2.59
5844	8279	4.155826	ACTCTTCGACATCAACAGAGAGAG	59.844	45.833	13.53	7.69	35.51	3.20
5886	8321	5.639757	TCGCATGTTTAAAGAATGACCATG	58.360	37.500	12.80	10.28	0.00	3.66
5910	8345	4.858850	TCCCTTCAAAGACATACATGCAT	58.141	39.130	0.00	0.00	0.00	3.96
6043	8478	6.369615	GCTATTTTGAACAATGCAAGTGGAAT	59.630	34.615	0.00	0.00	35.33	3.01
6130	8565	3.851976	AGTAGAGCACTAAACAGACGG	57.148	47.619	0.00	0.00	34.98	4.79
6131	8566	4.795268	TGAAGTAGAGCACTAAACAGACG	58.205	43.478	0.00	0.00	36.04	4.18
6343	8976	7.285783	CGATTTCACTCGTTTATTTGTCCTA	57.714	36.000	0.00	0.00	34.00	2.94
6941	9575	1.204941	ACCTCAAGAAGAACGGGATCG	59.795	52.381	0.00	0.00	43.02	3.69
7114	9748	1.105457	CCTCAGCTCTCTGACTCTGG	58.895	60.000	0.00	0.00	43.95	3.86
7214	9848	3.877559	TGATTGATCTTCCGCATCTTGT	58.122	40.909	0.00	0.00	0.00	3.16
7310	9944	3.535280	TTGACTTGGTTTTCTTTGCCC	57.465	42.857	0.00	0.00	0.00	5.36
7543	10179	6.287589	TCTTTCTCTCTAAACCATGTCCTC	57.712	41.667	0.00	0.00	0.00	3.71
7682	10318	4.275936	GTGGTACAAGAGTTTGATGCAACT	59.724	41.667	0.00	0.00	44.16	3.16
7902	10538	3.315418	CATGATCGTCTGATGAAGCGAT	58.685	45.455	3.31	1.74	43.29	4.58
7934	10570	2.354343	GCAAGGCCTTCCTCAGCT	59.646	61.111	17.29	0.00	43.40	4.24
7993	10629	1.278127	GCAGGTTAGCAGGTTGTCCTA	59.722	52.381	0.00	0.00	43.07	2.94
8008	10644	2.671070	CCAGATCGGGTTGCAGGT	59.329	61.111	3.35	0.00	0.00	4.00
8018	10654	0.247460	TCACCTGTGAAGCCAGATCG	59.753	55.000	0.00	0.00	36.53	3.69
8172	10810	2.287909	GCGTACAAACCAAGGATTTGCA	60.288	45.455	11.48	0.00	40.10	4.08
8318	10957	8.635765	TGAAGCTGAAGACCTAATTAATGTTT	57.364	30.769	0.00	0.00	0.00	2.83
8338	10977	1.275573	ACGGGGAAGTCTAGTTGAAGC	59.724	52.381	0.00	0.00	0.00	3.86
8353	10992	1.801309	ATGTTTTGAACGCCACGGGG	61.801	55.000	0.00	0.00	37.18	5.73
8354	10993	0.031449	AATGTTTTGAACGCCACGGG	59.969	50.000	0.00	0.00	0.00	5.28
8355	10994	1.846541	AAATGTTTTGAACGCCACGG	58.153	45.000	0.00	0.00	0.00	4.94
8356	10995	3.304559	TCAAAAATGTTTTGAACGCCACG	59.695	39.130	12.50	0.00	35.69	4.94
8357	10996	4.849111	TCAAAAATGTTTTGAACGCCAC	57.151	36.364	12.50	0.00	35.69	5.01
8358	10997	4.932200	ACTTCAAAAATGTTTTGAACGCCA	59.068	33.333	19.73	5.18	41.74	5.69
8359	10998	5.290885	AGACTTCAAAAATGTTTTGAACGCC	59.709	36.000	19.73	13.32	41.74	5.68
8360	10999	6.331170	AGACTTCAAAAATGTTTTGAACGC	57.669	33.333	19.73	15.27	41.74	4.84
8361	11000	6.291060	CCGAGACTTCAAAAATGTTTTGAACG	60.291	38.462	19.73	19.56	41.74	3.95
8362	11001	6.530181	ACCGAGACTTCAAAAATGTTTTGAAC	59.470	34.615	19.73	13.50	41.74	3.18
8363	11002	6.626302	ACCGAGACTTCAAAAATGTTTTGAA	58.374	32.000	21.39	21.39	43.62	2.69
8364	11003	6.202516	ACCGAGACTTCAAAAATGTTTTGA	57.797	33.333	11.18	11.18	36.71	2.69
8365	11004	6.751888	AGAACCGAGACTTCAAAAATGTTTTG	59.248	34.615	7.05	7.05	0.00	2.44
8366	11005	6.863275	AGAACCGAGACTTCAAAAATGTTTT	58.137	32.000	0.00	0.00	0.00	2.43
8367	11006	6.451064	AGAACCGAGACTTCAAAAATGTTT	57.549	33.333	0.00	0.00	0.00	2.83
8368	11007	7.562454	TTAGAACCGAGACTTCAAAAATGTT	57.438	32.000	0.00	0.00	0.00	2.71
8369	11008	7.415229	GTTTAGAACCGAGACTTCAAAAATGT	58.585	34.615	0.00	0.00	0.00	2.71
8370	11009	6.856426	GGTTTAGAACCGAGACTTCAAAAATG	59.144	38.462	0.00	0.00	42.62	2.32
8371	11010	6.967135	GGTTTAGAACCGAGACTTCAAAAAT	58.033	36.000	0.00	0.00	42.62	1.82
8372	11011	6.367686	GGTTTAGAACCGAGACTTCAAAAA	57.632	37.500	0.00	0.00	42.62	1.94
8373	11012	5.996669	GGTTTAGAACCGAGACTTCAAAA	57.003	39.130	0.00	0.00	42.62	2.44
8386	11025	4.493057	GCGCCATACTTTACGGTTTAGAAC	60.493	45.833	0.00	0.00	0.00	3.01
8387	11026	3.618150	GCGCCATACTTTACGGTTTAGAA	59.382	43.478	0.00	0.00	0.00	2.10
8388	11027	3.189285	GCGCCATACTTTACGGTTTAGA	58.811	45.455	0.00	0.00	0.00	2.10
8389	11028	2.931325	TGCGCCATACTTTACGGTTTAG	59.069	45.455	4.18	0.00	0.00	1.85
8390	11029	2.969990	TGCGCCATACTTTACGGTTTA	58.030	42.857	4.18	0.00	0.00	2.01
8391	11030	1.810959	TGCGCCATACTTTACGGTTT	58.189	45.000	4.18	0.00	0.00	3.27
8392	11031	2.032680	ATGCGCCATACTTTACGGTT	57.967	45.000	4.18	0.00	0.00	4.44
8393	11032	2.032680	AATGCGCCATACTTTACGGT	57.967	45.000	4.18	0.00	0.00	4.83
8394	11033	4.034742	AGTTTAATGCGCCATACTTTACGG	59.965	41.667	4.18	0.00	0.00	4.02
8395	11034	5.151632	AGTTTAATGCGCCATACTTTACG	57.848	39.130	4.18	0.00	0.00	3.18
8396	11035	7.857569	TGATAGTTTAATGCGCCATACTTTAC	58.142	34.615	4.18	0.00	0.00	2.01
8397	11036	8.439993	TTGATAGTTTAATGCGCCATACTTTA	57.560	30.769	4.18	0.00	0.00	1.85
8398	11037	6.935741	TGATAGTTTAATGCGCCATACTTT	57.064	33.333	4.18	0.00	0.00	2.66
8399	11038	6.542370	ACTTGATAGTTTAATGCGCCATACTT	59.458	34.615	4.18	0.00	0.00	2.24
8400	11039	6.055588	ACTTGATAGTTTAATGCGCCATACT	58.944	36.000	4.18	3.94	0.00	2.12
8401	11040	6.300354	ACTTGATAGTTTAATGCGCCATAC	57.700	37.500	4.18	0.00	0.00	2.39
8402	11041	7.214381	ACTACTTGATAGTTTAATGCGCCATA	58.786	34.615	4.18	0.00	41.71	2.74
8403	11042	6.055588	ACTACTTGATAGTTTAATGCGCCAT	58.944	36.000	4.18	0.00	41.71	4.40
8404	11043	5.424757	ACTACTTGATAGTTTAATGCGCCA	58.575	37.500	4.18	0.00	41.71	5.69
8405	11044	5.522460	TGACTACTTGATAGTTTAATGCGCC	59.478	40.000	4.18	0.00	44.64	6.53
8406	11045	6.583912	TGACTACTTGATAGTTTAATGCGC	57.416	37.500	0.00	0.00	44.64	6.09
8414	11053	8.298140	GCTCGGTATAATGACTACTTGATAGTT	58.702	37.037	0.00	0.00	44.64	2.24
8416	11055	8.046294	AGCTCGGTATAATGACTACTTGATAG	57.954	38.462	0.00	0.00	36.89	2.08
8417	11056	7.997773	AGCTCGGTATAATGACTACTTGATA	57.002	36.000	0.00	0.00	0.00	2.15
8418	11057	6.902771	AGCTCGGTATAATGACTACTTGAT	57.097	37.500	0.00	0.00	0.00	2.57
8419	11058	6.096423	ACAAGCTCGGTATAATGACTACTTGA	59.904	38.462	0.00	0.00	35.81	3.02
8420	11059	6.273825	ACAAGCTCGGTATAATGACTACTTG	58.726	40.000	0.00	0.00	37.42	3.16
8421	11060	6.096423	TGACAAGCTCGGTATAATGACTACTT	59.904	38.462	0.00	0.00	0.00	2.24
8422	11061	5.593095	TGACAAGCTCGGTATAATGACTACT	59.407	40.000	0.00	0.00	0.00	2.57
8423	11062	5.828747	TGACAAGCTCGGTATAATGACTAC	58.171	41.667	0.00	0.00	0.00	2.73
8424	11063	6.459670	TTGACAAGCTCGGTATAATGACTA	57.540	37.500	0.00	0.00	0.00	2.59
8425	11064	5.339008	TTGACAAGCTCGGTATAATGACT	57.661	39.130	0.00	0.00	0.00	3.41
8426	11065	5.500290	CGTTTGACAAGCTCGGTATAATGAC	60.500	44.000	0.37	0.00	0.00	3.06
8427	11066	4.565166	CGTTTGACAAGCTCGGTATAATGA	59.435	41.667	0.37	0.00	0.00	2.57
8428	11067	4.328983	ACGTTTGACAAGCTCGGTATAATG	59.671	41.667	0.37	0.00	0.00	1.90
8429	11068	4.501071	ACGTTTGACAAGCTCGGTATAAT	58.499	39.130	0.37	0.00	0.00	1.28
8430	11069	3.916761	ACGTTTGACAAGCTCGGTATAA	58.083	40.909	0.37	0.00	0.00	0.98
8431	11070	3.581024	ACGTTTGACAAGCTCGGTATA	57.419	42.857	0.37	0.00	0.00	1.47
8432	11071	2.450609	ACGTTTGACAAGCTCGGTAT	57.549	45.000	0.37	0.00	0.00	2.73
8433	11072	2.129607	GAACGTTTGACAAGCTCGGTA	58.870	47.619	0.46	0.00	0.00	4.02
8434	11073	0.935196	GAACGTTTGACAAGCTCGGT	59.065	50.000	0.46	0.71	0.00	4.69
8435	11074	0.934496	TGAACGTTTGACAAGCTCGG	59.066	50.000	0.46	0.00	0.00	4.63
8436	11075	2.949714	ATGAACGTTTGACAAGCTCG	57.050	45.000	0.46	4.61	0.00	5.03
8450	11089	2.932614	AGCAGATGCAGACGTTATGAAC	59.067	45.455	7.68	0.00	45.16	3.18
8451	11090	3.190079	GAGCAGATGCAGACGTTATGAA	58.810	45.455	7.68	0.00	45.16	2.57
8452	11091	2.481969	GGAGCAGATGCAGACGTTATGA	60.482	50.000	7.68	0.00	45.16	2.15
8453	11092	1.863454	GGAGCAGATGCAGACGTTATG	59.137	52.381	7.68	0.00	45.16	1.90
8454	11093	1.759445	AGGAGCAGATGCAGACGTTAT	59.241	47.619	7.68	0.00	45.16	1.89
8455	11094	1.134995	CAGGAGCAGATGCAGACGTTA	60.135	52.381	7.68	0.00	45.16	3.18
8456	11095	0.390866	CAGGAGCAGATGCAGACGTT	60.391	55.000	7.68	0.00	45.16	3.99
8457	11096	1.217511	CAGGAGCAGATGCAGACGT	59.782	57.895	7.68	0.00	45.16	4.34
8458	11097	2.172372	GCAGGAGCAGATGCAGACG	61.172	63.158	7.68	0.00	45.16	4.18
8459	11098	3.810812	GCAGGAGCAGATGCAGAC	58.189	61.111	7.68	0.00	45.16	3.51
8472	11111	8.118720	ATCATTAAGTGACAGACCTATTGCAGG	61.119	40.741	0.00	0.00	44.74	4.85
8473	11112	6.108687	TCATTAAGTGACAGACCTATTGCAG	58.891	40.000	0.00	0.00	0.00	4.41
8474	11113	6.048732	TCATTAAGTGACAGACCTATTGCA	57.951	37.500	0.00	0.00	0.00	4.08
8475	11114	6.512415	GCATCATTAAGTGACAGACCTATTGC	60.512	42.308	0.00	0.00	40.28	3.56
8476	11115	6.539826	TGCATCATTAAGTGACAGACCTATTG	59.460	38.462	0.00	0.00	40.28	1.90
8477	11116	6.653020	TGCATCATTAAGTGACAGACCTATT	58.347	36.000	0.00	0.00	40.28	1.73
8478	11117	6.239217	TGCATCATTAAGTGACAGACCTAT	57.761	37.500	0.00	0.00	40.28	2.57
8479	11118	5.675684	TGCATCATTAAGTGACAGACCTA	57.324	39.130	0.00	0.00	40.28	3.08
8480	11119	4.558226	TGCATCATTAAGTGACAGACCT	57.442	40.909	0.00	0.00	40.28	3.85
8481	11120	5.824904	AATGCATCATTAAGTGACAGACC	57.175	39.130	0.00	0.00	40.28	3.85
8509	11148	5.886992	TCATTGCTGCACAGAAGAATTATG	58.113	37.500	0.00	0.00	44.26	1.90
8510	11149	5.884232	TCTCATTGCTGCACAGAAGAATTAT	59.116	36.000	0.00	0.00	0.00	1.28
8511	11150	5.247862	TCTCATTGCTGCACAGAAGAATTA	58.752	37.500	0.00	0.00	0.00	1.40
8512	11151	4.077108	TCTCATTGCTGCACAGAAGAATT	58.923	39.130	0.00	0.00	0.00	2.17
8513	11152	3.682696	TCTCATTGCTGCACAGAAGAAT	58.317	40.909	0.00	0.00	0.00	2.40
8514	11153	3.130280	TCTCATTGCTGCACAGAAGAA	57.870	42.857	0.00	0.00	0.00	2.52
8515	11154	2.845363	TCTCATTGCTGCACAGAAGA	57.155	45.000	0.00	0.27	0.00	2.87
8516	11155	5.556355	TTATTCTCATTGCTGCACAGAAG	57.444	39.130	17.78	8.40	0.00	2.85
8517	11156	5.066893	GGATTATTCTCATTGCTGCACAGAA	59.933	40.000	16.09	16.09	0.00	3.02
8518	11157	4.577693	GGATTATTCTCATTGCTGCACAGA	59.422	41.667	0.00	2.12	0.00	3.41
8519	11158	4.579340	AGGATTATTCTCATTGCTGCACAG	59.421	41.667	0.00	0.00	0.00	3.66
8520	11159	4.529897	AGGATTATTCTCATTGCTGCACA	58.470	39.130	0.00	0.00	0.00	4.57
8521	11160	4.577693	TGAGGATTATTCTCATTGCTGCAC	59.422	41.667	0.00	0.00	36.46	4.57
8522	11161	4.784177	TGAGGATTATTCTCATTGCTGCA	58.216	39.130	0.00	0.00	36.46	4.41
8523	11162	5.061853	TCTGAGGATTATTCTCATTGCTGC	58.938	41.667	3.35	0.00	40.07	5.25
8524	11163	6.091034	CGATCTGAGGATTATTCTCATTGCTG	59.909	42.308	3.35	0.00	40.07	4.41
8525	11164	6.164876	CGATCTGAGGATTATTCTCATTGCT	58.835	40.000	3.35	0.00	40.07	3.91
8526	11165	5.163874	GCGATCTGAGGATTATTCTCATTGC	60.164	44.000	3.35	2.42	40.07	3.56
8527	11166	5.061933	CGCGATCTGAGGATTATTCTCATTG	59.938	44.000	0.00	0.00	40.07	2.82
8528	11167	5.047731	TCGCGATCTGAGGATTATTCTCATT	60.048	40.000	3.71	0.00	40.07	2.57
8529	11168	4.460731	TCGCGATCTGAGGATTATTCTCAT	59.539	41.667	3.71	0.00	40.07	2.90
8530	11169	3.821033	TCGCGATCTGAGGATTATTCTCA	59.179	43.478	3.71	2.88	38.75	3.27
8531	11170	4.083003	ACTCGCGATCTGAGGATTATTCTC	60.083	45.833	10.36	0.00	37.79	2.87
8532	11171	3.823873	ACTCGCGATCTGAGGATTATTCT	59.176	43.478	10.36	0.00	37.79	2.40
8533	11172	4.167554	ACTCGCGATCTGAGGATTATTC	57.832	45.455	10.36	0.00	37.79	1.75
8534	11173	4.202161	ACAACTCGCGATCTGAGGATTATT	60.202	41.667	20.64	0.00	37.79	1.40
8535	11174	3.319405	ACAACTCGCGATCTGAGGATTAT	59.681	43.478	20.64	0.00	37.79	1.28
8536	11175	2.688446	ACAACTCGCGATCTGAGGATTA	59.312	45.455	20.64	0.00	37.79	1.75
8537	11176	1.478510	ACAACTCGCGATCTGAGGATT	59.521	47.619	20.64	0.00	37.79	3.01
8538	11177	1.066303	GACAACTCGCGATCTGAGGAT	59.934	52.381	20.64	2.18	37.79	3.24
8539	11178	0.452184	GACAACTCGCGATCTGAGGA	59.548	55.000	20.64	0.00	37.79	3.71
8540	11179	0.453793	AGACAACTCGCGATCTGAGG	59.546	55.000	20.64	6.89	37.79	3.86
8541	11180	1.543614	CAGACAACTCGCGATCTGAG	58.456	55.000	25.87	10.78	40.92	3.35
8542	11181	0.456824	GCAGACAACTCGCGATCTGA	60.457	55.000	31.33	3.00	40.92	3.27
8543	11182	0.733909	TGCAGACAACTCGCGATCTG	60.734	55.000	25.75	25.75	41.29	2.90
8544	11183	0.174389	ATGCAGACAACTCGCGATCT	59.826	50.000	10.36	6.72	0.00	2.75
8545	11184	0.574454	GATGCAGACAACTCGCGATC	59.426	55.000	10.36	3.85	0.00	3.69
8546	11185	1.142185	CGATGCAGACAACTCGCGAT	61.142	55.000	10.36	0.00	0.00	4.58
8547	11186	1.801512	CGATGCAGACAACTCGCGA	60.802	57.895	9.26	9.26	0.00	5.87
8637	11288	4.960938	TGCAAAGACTTCACAGACATACT	58.039	39.130	0.00	0.00	0.00	2.12
8643	11294	3.730662	GCGTTTTGCAAAGACTTCACAGA	60.731	43.478	12.41	0.00	45.45	3.41
8680	11332	7.717875	GCTACTACTCTCTCCGATCCATAATAT	59.282	40.741	0.00	0.00	0.00	1.28
8696	11348	7.790314	AGGGAGTAATAAATTGGCTACTACTCT	59.210	37.037	0.00	0.00	35.95	3.24
8724	11376	3.855255	TGAGACACTCATTTTGGGACA	57.145	42.857	0.00	0.00	35.39	4.02
8735	11387	7.427214	AGAGTTAGTACAAAGTTGAGACACTC	58.573	38.462	0.00	5.89	0.00	3.51
8757	11409	2.173143	AGGAACGGAGGGAGTACTAGAG	59.827	54.545	0.00	0.00	0.00	2.43
8760	11412	4.591321	TTTAGGAACGGAGGGAGTACTA	57.409	45.455	0.00	0.00	0.00	1.82
8762	11414	7.232330	ACTTATATTTAGGAACGGAGGGAGTAC	59.768	40.741	0.00	0.00	0.00	2.73
8763	11415	7.300658	ACTTATATTTAGGAACGGAGGGAGTA	58.699	38.462	0.00	0.00	0.00	2.59
8764	11416	6.141790	ACTTATATTTAGGAACGGAGGGAGT	58.858	40.000	0.00	0.00	0.00	3.85
8765	11417	6.494146	AGACTTATATTTAGGAACGGAGGGAG	59.506	42.308	0.00	0.00	0.00	4.30
8766	11418	6.379579	AGACTTATATTTAGGAACGGAGGGA	58.620	40.000	0.00	0.00	0.00	4.20
8767	11419	6.667558	AGACTTATATTTAGGAACGGAGGG	57.332	41.667	0.00	0.00	0.00	4.30
8768	11420	8.959705	AAAAGACTTATATTTAGGAACGGAGG	57.040	34.615	0.00	0.00	0.00	4.30
8785	11437	9.803315	GTTCATTTGAAACCTCTAAAAAGACTT	57.197	29.630	0.00	0.00	35.58	3.01
8786	11438	9.190317	AGTTCATTTGAAACCTCTAAAAAGACT	57.810	29.630	0.00	0.00	35.58	3.24
8792	11444	9.179909	TGTTGTAGTTCATTTGAAACCTCTAAA	57.820	29.630	0.00	0.00	35.58	1.85
8793	11445	8.740123	TGTTGTAGTTCATTTGAAACCTCTAA	57.260	30.769	0.00	0.00	35.58	2.10
8794	11446	8.918202	ATGTTGTAGTTCATTTGAAACCTCTA	57.082	30.769	0.00	0.00	35.58	2.43
8795	11447	7.823745	ATGTTGTAGTTCATTTGAAACCTCT	57.176	32.000	0.00	0.00	35.58	3.69
8832	11484	9.737427	CGTGAATCTACACTCTAAAATATGTCT	57.263	33.333	0.00	0.00	38.47	3.41
8833	11485	8.480853	GCGTGAATCTACACTCTAAAATATGTC	58.519	37.037	0.00	0.00	38.47	3.06
8834	11486	7.979537	TGCGTGAATCTACACTCTAAAATATGT	59.020	33.333	0.00	0.00	38.47	2.29
8835	11487	8.352752	TGCGTGAATCTACACTCTAAAATATG	57.647	34.615	0.00	0.00	38.47	1.78
8836	11488	9.547753	AATGCGTGAATCTACACTCTAAAATAT	57.452	29.630	0.00	0.00	38.47	1.28
8837	11489	8.942338	AATGCGTGAATCTACACTCTAAAATA	57.058	30.769	0.00	0.00	38.47	1.40
8838	11490	7.849804	AATGCGTGAATCTACACTCTAAAAT	57.150	32.000	0.00	0.00	38.47	1.82
8839	11491	7.667043	AAATGCGTGAATCTACACTCTAAAA	57.333	32.000	0.00	0.00	38.47	1.52
8840	11492	7.518161	CAAAATGCGTGAATCTACACTCTAAA	58.482	34.615	0.00	0.00	38.47	1.85
8841	11493	6.402118	GCAAAATGCGTGAATCTACACTCTAA	60.402	38.462	0.00	0.00	38.47	2.10
8842	11494	5.063438	GCAAAATGCGTGAATCTACACTCTA	59.937	40.000	0.00	0.00	38.47	2.43
8843	11495	4.142816	GCAAAATGCGTGAATCTACACTCT	60.143	41.667	0.00	0.00	38.47	3.24
8844	11496	4.091424	GCAAAATGCGTGAATCTACACTC	58.909	43.478	0.00	0.00	38.47	3.51
8845	11497	4.083581	GCAAAATGCGTGAATCTACACT	57.916	40.909	0.00	0.00	38.47	3.55
8858	11510	4.495844	GGGACTACATACGAAGCAAAATGC	60.496	45.833	0.00	0.00	45.46	3.56
8859	11511	4.876107	AGGGACTACATACGAAGCAAAATG	59.124	41.667	0.00	0.00	36.02	2.32
8860	11512	5.099042	AGGGACTACATACGAAGCAAAAT	57.901	39.130	0.00	0.00	36.02	1.82
8861	11513	4.546829	AGGGACTACATACGAAGCAAAA	57.453	40.909	0.00	0.00	36.02	2.44
8862	11514	4.250464	CAAGGGACTACATACGAAGCAAA	58.750	43.478	0.00	0.00	38.49	3.68
8863	11515	3.259876	ACAAGGGACTACATACGAAGCAA	59.740	43.478	0.00	0.00	38.49	3.91
8864	11516	2.829720	ACAAGGGACTACATACGAAGCA	59.170	45.455	0.00	0.00	38.49	3.91
8865	11517	3.521947	ACAAGGGACTACATACGAAGC	57.478	47.619	0.00	0.00	38.49	3.86
8866	11518	4.817517	ACAACAAGGGACTACATACGAAG	58.182	43.478	0.00	0.00	38.49	3.79
8867	11519	4.877378	ACAACAAGGGACTACATACGAA	57.123	40.909	0.00	0.00	38.49	3.85
8868	11520	5.981088	TTACAACAAGGGACTACATACGA	57.019	39.130	0.00	0.00	38.49	3.43
8869	11521	6.570692	AGATTACAACAAGGGACTACATACG	58.429	40.000	0.00	0.00	38.49	3.06
8870	11522	7.783042	AGAGATTACAACAAGGGACTACATAC	58.217	38.462	0.00	0.00	38.49	2.39
8871	11523	7.973048	AGAGATTACAACAAGGGACTACATA	57.027	36.000	0.00	0.00	38.49	2.29
8872	11524	6.875972	AGAGATTACAACAAGGGACTACAT	57.124	37.500	0.00	0.00	38.49	2.29
8873	11525	7.786046	TTAGAGATTACAACAAGGGACTACA	57.214	36.000	0.00	0.00	38.49	2.74
8874	11526	9.498176	TTTTTAGAGATTACAACAAGGGACTAC	57.502	33.333	0.00	0.00	38.49	2.73
8875	11527	9.720769	CTTTTTAGAGATTACAACAAGGGACTA	57.279	33.333	0.00	0.00	38.49	2.59
8877	11529	8.504815	GTCTTTTTAGAGATTACAACAAGGGAC	58.495	37.037	0.00	0.00	0.00	4.46
8878	11530	8.437575	AGTCTTTTTAGAGATTACAACAAGGGA	58.562	33.333	0.00	0.00	0.00	4.20
8879	11531	8.622948	AGTCTTTTTAGAGATTACAACAAGGG	57.377	34.615	0.00	0.00	0.00	3.95
8897	11549	9.025041	CCCTCTGTTTCCAAATATAAGTCTTTT	57.975	33.333	0.00	0.00	0.00	2.27
8898	11550	8.390921	TCCCTCTGTTTCCAAATATAAGTCTTT	58.609	33.333	0.00	0.00	0.00	2.52
8899	11551	7.928873	TCCCTCTGTTTCCAAATATAAGTCTT	58.071	34.615	0.00	0.00	0.00	3.01
8900	11552	7.182930	ACTCCCTCTGTTTCCAAATATAAGTCT	59.817	37.037	0.00	0.00	0.00	3.24
8901	11553	7.339482	ACTCCCTCTGTTTCCAAATATAAGTC	58.661	38.462	0.00	0.00	0.00	3.01
8902	11554	7.272144	ACTCCCTCTGTTTCCAAATATAAGT	57.728	36.000	0.00	0.00	0.00	2.24
8903	11555	8.265055	TGTACTCCCTCTGTTTCCAAATATAAG	58.735	37.037	0.00	0.00	0.00	1.73
8904	11556	8.153221	TGTACTCCCTCTGTTTCCAAATATAA	57.847	34.615	0.00	0.00	0.00	0.98
8905	11557	7.743116	TGTACTCCCTCTGTTTCCAAATATA	57.257	36.000	0.00	0.00	0.00	0.86
8906	11558	6.636454	TGTACTCCCTCTGTTTCCAAATAT	57.364	37.500	0.00	0.00	0.00	1.28
8907	11559	6.442541	TTGTACTCCCTCTGTTTCCAAATA	57.557	37.500	0.00	0.00	0.00	1.40
8908	11560	4.993705	TGTACTCCCTCTGTTTCCAAAT	57.006	40.909	0.00	0.00	0.00	2.32
8909	11561	4.781775	TTGTACTCCCTCTGTTTCCAAA	57.218	40.909	0.00	0.00	0.00	3.28
8910	11562	4.165372	ACTTTGTACTCCCTCTGTTTCCAA	59.835	41.667	0.00	0.00	0.00	3.53
8911	11563	3.714798	ACTTTGTACTCCCTCTGTTTCCA	59.285	43.478	0.00	0.00	0.00	3.53
8912	11564	4.353383	ACTTTGTACTCCCTCTGTTTCC	57.647	45.455	0.00	0.00	0.00	3.13
8913	11565	5.612351	AGAACTTTGTACTCCCTCTGTTTC	58.388	41.667	0.00	0.00	0.00	2.78
8914	11566	5.632034	AGAACTTTGTACTCCCTCTGTTT	57.368	39.130	0.00	0.00	0.00	2.83
8915	11567	5.011840	GGTAGAACTTTGTACTCCCTCTGTT	59.988	44.000	0.00	0.00	0.00	3.16
8916	11568	4.527427	GGTAGAACTTTGTACTCCCTCTGT	59.473	45.833	0.00	0.00	0.00	3.41
8917	11569	4.081586	GGGTAGAACTTTGTACTCCCTCTG	60.082	50.000	0.00	0.00	0.00	3.35
8918	11570	4.095211	GGGTAGAACTTTGTACTCCCTCT	58.905	47.826	0.00	0.00	0.00	3.69
8919	11571	3.197333	GGGGTAGAACTTTGTACTCCCTC	59.803	52.174	4.16	0.00	40.66	4.30
8920	11572	3.179685	GGGGTAGAACTTTGTACTCCCT	58.820	50.000	4.16	0.00	40.66	4.20
8921	11573	3.179685	AGGGGTAGAACTTTGTACTCCC	58.820	50.000	10.81	11.32	45.99	4.30
8922	11574	4.095211	AGAGGGGTAGAACTTTGTACTCC	58.905	47.826	7.03	7.03	45.38	3.85
8923	11575	4.160065	GGAGAGGGGTAGAACTTTGTACTC	59.840	50.000	0.00	0.00	0.00	2.59
8924	11576	4.095211	GGAGAGGGGTAGAACTTTGTACT	58.905	47.826	0.00	0.00	0.00	2.73
8925	11577	3.119209	CGGAGAGGGGTAGAACTTTGTAC	60.119	52.174	0.00	0.00	0.00	2.90
8926	11578	3.094572	CGGAGAGGGGTAGAACTTTGTA	58.905	50.000	0.00	0.00	0.00	2.41
8927	11579	1.900486	CGGAGAGGGGTAGAACTTTGT	59.100	52.381	0.00	0.00	0.00	2.83
8928	11580	1.900486	ACGGAGAGGGGTAGAACTTTG	59.100	52.381	0.00	0.00	0.00	2.77
8929	11581	2.177734	GACGGAGAGGGGTAGAACTTT	58.822	52.381	0.00	0.00	0.00	2.66
8930	11582	1.619160	GGACGGAGAGGGGTAGAACTT	60.619	57.143	0.00	0.00	0.00	2.66
8931	11583	0.033306	GGACGGAGAGGGGTAGAACT	60.033	60.000	0.00	0.00	0.00	3.01
8932	11584	1.382692	CGGACGGAGAGGGGTAGAAC	61.383	65.000	0.00	0.00	0.00	3.01
8933	11585	1.077212	CGGACGGAGAGGGGTAGAA	60.077	63.158	0.00	0.00	0.00	2.10
8934	11586	1.565390	TTCGGACGGAGAGGGGTAGA	61.565	60.000	0.00	0.00	0.00	2.59
8935	11587	0.682209	TTTCGGACGGAGAGGGGTAG	60.682	60.000	0.00	0.00	0.00	3.18
8936	11588	0.251742	TTTTCGGACGGAGAGGGGTA	60.252	55.000	0.00	0.00	0.00	3.69
8937	11589	0.908180	ATTTTCGGACGGAGAGGGGT	60.908	55.000	0.00	0.00	0.00	4.95
8938	11590	1.117150	TATTTTCGGACGGAGAGGGG	58.883	55.000	0.00	0.00	0.00	4.79
8939	11591	1.755380	AGTATTTTCGGACGGAGAGGG	59.245	52.381	0.00	0.00	0.00	4.30
8940	11592	3.187700	CAAGTATTTTCGGACGGAGAGG	58.812	50.000	0.00	0.00	0.00	3.69
8941	11593	3.846360	ACAAGTATTTTCGGACGGAGAG	58.154	45.455	0.00	0.00	0.00	3.20
8942	11594	3.256383	TGACAAGTATTTTCGGACGGAGA	59.744	43.478	0.00	0.00	0.00	3.71
8943	11595	3.581755	TGACAAGTATTTTCGGACGGAG	58.418	45.455	0.00	0.00	0.00	4.63
8944	11596	3.663995	TGACAAGTATTTTCGGACGGA	57.336	42.857	0.00	0.00	0.00	4.69
8945	11597	3.930229	TGATGACAAGTATTTTCGGACGG	59.070	43.478	0.00	0.00	0.00	4.79
8946	11598	5.524511	TTGATGACAAGTATTTTCGGACG	57.475	39.130	0.00	0.00	0.00	4.79
8947	11599	9.490663	CTATTTTGATGACAAGTATTTTCGGAC	57.509	33.333	0.00	0.00	37.32	4.79
8948	11600	9.443323	TCTATTTTGATGACAAGTATTTTCGGA	57.557	29.630	0.00	0.00	37.32	4.55
8980	11632	9.339850	ACGTATTGTAGTTCTAGATACATCACT	57.660	33.333	6.96	2.96	32.24	3.41
8981	11633	9.947669	AACGTATTGTAGTTCTAGATACATCAC	57.052	33.333	6.96	7.21	32.24	3.06
8992	11644	9.578439	GGATGTAACTAAACGTATTGTAGTTCT	57.422	33.333	13.80	4.90	38.62	3.01
8993	11645	8.811378	GGGATGTAACTAAACGTATTGTAGTTC	58.189	37.037	13.80	8.93	38.62	3.01
8994	11646	7.765819	GGGGATGTAACTAAACGTATTGTAGTT	59.234	37.037	14.47	14.47	40.34	2.24
8995	11647	7.124750	AGGGGATGTAACTAAACGTATTGTAGT	59.875	37.037	0.00	0.00	0.00	2.73
8996	11648	7.495055	AGGGGATGTAACTAAACGTATTGTAG	58.505	38.462	0.00	0.00	0.00	2.74
8997	11649	7.422465	AGGGGATGTAACTAAACGTATTGTA	57.578	36.000	0.00	0.00	0.00	2.41
8998	11650	6.303903	AGGGGATGTAACTAAACGTATTGT	57.696	37.500	0.00	0.00	0.00	2.71
8999	11651	7.619964	AAAGGGGATGTAACTAAACGTATTG	57.380	36.000	0.00	0.00	0.00	1.90
9000	11652	7.884354	TCAAAAGGGGATGTAACTAAACGTATT	59.116	33.333	0.00	0.00	0.00	1.89
9001	11653	7.396418	TCAAAAGGGGATGTAACTAAACGTAT	58.604	34.615	0.00	0.00	0.00	3.06
9002	11654	6.767456	TCAAAAGGGGATGTAACTAAACGTA	58.233	36.000	0.00	0.00	0.00	3.57
9003	11655	5.623169	TCAAAAGGGGATGTAACTAAACGT	58.377	37.500	0.00	0.00	0.00	3.99
9004	11656	6.551736	CATCAAAAGGGGATGTAACTAAACG	58.448	40.000	0.00	0.00	37.85	3.60
9014	11666	5.928839	CGTCTAGATACATCAAAAGGGGATG	59.071	44.000	0.00	0.00	45.93	3.51
9015	11667	5.012148	CCGTCTAGATACATCAAAAGGGGAT	59.988	44.000	0.00	0.00	0.00	3.85
9016	11668	4.344102	CCGTCTAGATACATCAAAAGGGGA	59.656	45.833	0.00	0.00	0.00	4.81
9017	11669	4.344102	TCCGTCTAGATACATCAAAAGGGG	59.656	45.833	0.00	0.00	0.00	4.79
9018	11670	5.509840	CCTCCGTCTAGATACATCAAAAGGG	60.510	48.000	0.00	0.00	0.00	3.95
9019	11671	5.509840	CCCTCCGTCTAGATACATCAAAAGG	60.510	48.000	0.00	0.00	0.00	3.11
9020	11672	5.509840	CCCCTCCGTCTAGATACATCAAAAG	60.510	48.000	0.00	0.00	0.00	2.27
9021	11673	4.344102	CCCCTCCGTCTAGATACATCAAAA	59.656	45.833	0.00	0.00	0.00	2.44
9022	11674	3.895656	CCCCTCCGTCTAGATACATCAAA	59.104	47.826	0.00	0.00	0.00	2.69
9023	11675	3.497332	CCCCTCCGTCTAGATACATCAA	58.503	50.000	0.00	0.00	0.00	2.57
9024	11676	2.225041	CCCCCTCCGTCTAGATACATCA	60.225	54.545	0.00	0.00	0.00	3.07
9025	11677	2.225066	ACCCCCTCCGTCTAGATACATC	60.225	54.545	0.00	0.00	0.00	3.06
9026	11678	1.787676	ACCCCCTCCGTCTAGATACAT	59.212	52.381	0.00	0.00	0.00	2.29
9027	11679	1.229131	ACCCCCTCCGTCTAGATACA	58.771	55.000	0.00	0.00	0.00	2.29
9028	11680	2.374839	AGTACCCCCTCCGTCTAGATAC	59.625	54.545	0.00	0.00	0.00	2.24
9029	11681	2.711174	AGTACCCCCTCCGTCTAGATA	58.289	52.381	0.00	0.00	0.00	1.98
9030	11682	1.532038	AGTACCCCCTCCGTCTAGAT	58.468	55.000	0.00	0.00	0.00	1.98
9031	11683	2.196742	TAGTACCCCCTCCGTCTAGA	57.803	55.000	0.00	0.00	0.00	2.43
9044	11696	8.443937	CAAAATAAGTGTCTCAAGCTTAGTACC	58.556	37.037	0.00	0.00	0.00	3.34
9052	11704	5.415701	TCATCCCAAAATAAGTGTCTCAAGC	59.584	40.000	0.00	0.00	0.00	4.01
9053	11705	7.362401	CCTTCATCCCAAAATAAGTGTCTCAAG	60.362	40.741	0.00	0.00	0.00	3.02
9076	11739	9.712305	GTATATCATGTAAGCACATACTTCCTT	57.288	33.333	0.00	0.00	43.73	3.36
9212	14076	8.736097	TCCCTGAACCTTTGCTATCTAATATA	57.264	34.615	0.00	0.00	0.00	0.86
9213	14077	7.633018	TCCCTGAACCTTTGCTATCTAATAT	57.367	36.000	0.00	0.00	0.00	1.28

Based at the University of Bristol with support from BBSRC.

AutoCloner maintained by Alex Coulton.