Multiple sequence alignment - TraesCS4D01G164100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G164100 chr4D 100.000 2273 0 0 1 2273 261360223 261357951 0.000000e+00 4198
1 TraesCS4D01G164100 chr4D 80.566 1307 244 9 1 1301 20529516 20530818 0.000000e+00 998
2 TraesCS4D01G164100 chr4D 92.486 346 24 2 1928 2273 199903143 199902800 5.640000e-136 494
3 TraesCS4D01G164100 chr6A 92.237 1301 100 1 1 1301 27564026 27562727 0.000000e+00 1842
4 TraesCS4D01G164100 chr2B 91.475 1302 107 3 1 1301 789543226 789541928 0.000000e+00 1786
5 TraesCS4D01G164100 chr7B 88.940 1302 139 5 1 1301 713141466 713142763 0.000000e+00 1602
6 TraesCS4D01G164100 chr7B 92.486 346 25 1 1928 2273 198711473 198711129 5.640000e-136 494
7 TraesCS4D01G164100 chr7B 92.222 90 7 0 1330 1419 303526701 303526612 6.590000e-26 128
8 TraesCS4D01G164100 chr3A 92.035 1130 90 0 172 1301 48445304 48446433 0.000000e+00 1589
9 TraesCS4D01G164100 chr3A 91.806 1135 87 2 172 1301 48365868 48367001 0.000000e+00 1576
10 TraesCS4D01G164100 chr3A 93.388 121 8 0 1330 1450 321238060 321237940 1.790000e-41 180
11 TraesCS4D01G164100 chr1B 88.488 1303 135 11 2 1301 668198167 668196877 0.000000e+00 1561
12 TraesCS4D01G164100 chr1B 88.376 1170 134 2 3 1171 360982233 360983401 0.000000e+00 1406
13 TraesCS4D01G164100 chr1B 92.116 241 15 4 1067 1304 142290855 142291094 1.010000e-88 337
14 TraesCS4D01G164100 chr5A 82.676 1039 171 8 271 1303 440976031 440974996 0.000000e+00 913
15 TraesCS4D01G164100 chr5A 93.388 121 8 0 1330 1450 257842066 257841946 1.790000e-41 180
16 TraesCS4D01G164100 chr6B 81.515 660 119 3 1 660 616803480 616804136 7.140000e-150 540
17 TraesCS4D01G164100 chr1D 93.642 346 21 1 1928 2273 151628692 151628348 1.200000e-142 516
18 TraesCS4D01G164100 chr7D 93.064 346 23 1 1928 2273 316351339 316350995 2.610000e-139 505
19 TraesCS4D01G164100 chr7A 92.795 347 22 3 1928 2273 349662323 349661979 1.210000e-137 499
20 TraesCS4D01G164100 chr4A 92.330 352 26 1 1922 2273 235643202 235643552 1.210000e-137 499
21 TraesCS4D01G164100 chr3D 92.775 346 23 2 1928 2273 244339444 244339101 1.210000e-137 499
22 TraesCS4D01G164100 chr3D 92.197 346 24 3 1928 2273 264988053 264987711 9.440000e-134 486
23 TraesCS4D01G164100 chr6D 91.761 352 28 1 1922 2273 221813180 221813530 2.620000e-134 488
24 TraesCS4D01G164100 chrUn 91.496 341 21 5 1330 1666 55139547 55139883 1.590000e-126 462
25 TraesCS4D01G164100 chrUn 88.353 249 25 2 1653 1900 55141577 55141822 1.710000e-76 296
26 TraesCS4D01G164100 chrUn 88.353 249 25 2 1653 1900 311728469 311728714 1.710000e-76 296
27 TraesCS4D01G164100 chrUn 92.562 121 9 0 1330 1450 119948104 119947984 8.350000e-40 174
28 TraesCS4D01G164100 chr3B 91.736 121 10 0 1330 1450 347669878 347669758 3.880000e-38 169
29 TraesCS4D01G164100 chr2A 91.736 121 10 0 1330 1450 322826162 322826282 3.880000e-38 169
30 TraesCS4D01G164100 chr4B 89.831 118 12 0 1330 1447 351478860 351478977 3.910000e-33 152


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G164100 chr4D 261357951 261360223 2272 True 4198 4198 100.0000 1 2273 1 chr4D.!!$R2 2272
1 TraesCS4D01G164100 chr4D 20529516 20530818 1302 False 998 998 80.5660 1 1301 1 chr4D.!!$F1 1300
2 TraesCS4D01G164100 chr6A 27562727 27564026 1299 True 1842 1842 92.2370 1 1301 1 chr6A.!!$R1 1300
3 TraesCS4D01G164100 chr2B 789541928 789543226 1298 True 1786 1786 91.4750 1 1301 1 chr2B.!!$R1 1300
4 TraesCS4D01G164100 chr7B 713141466 713142763 1297 False 1602 1602 88.9400 1 1301 1 chr7B.!!$F1 1300
5 TraesCS4D01G164100 chr3A 48445304 48446433 1129 False 1589 1589 92.0350 172 1301 1 chr3A.!!$F2 1129
6 TraesCS4D01G164100 chr3A 48365868 48367001 1133 False 1576 1576 91.8060 172 1301 1 chr3A.!!$F1 1129
7 TraesCS4D01G164100 chr1B 668196877 668198167 1290 True 1561 1561 88.4880 2 1301 1 chr1B.!!$R1 1299
8 TraesCS4D01G164100 chr1B 360982233 360983401 1168 False 1406 1406 88.3760 3 1171 1 chr1B.!!$F2 1168
9 TraesCS4D01G164100 chr5A 440974996 440976031 1035 True 913 913 82.6760 271 1303 1 chr5A.!!$R2 1032
10 TraesCS4D01G164100 chr6B 616803480 616804136 656 False 540 540 81.5150 1 660 1 chr6B.!!$F1 659
11 TraesCS4D01G164100 chrUn 55139547 55141822 2275 False 379 462 89.9245 1330 1900 2 chrUn.!!$F2 570

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
966 971 2.110188 AGCTCTACGGGAAGGGATGATA 59.89 50.0 0.0 0.0 0.0 2.15 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2135 3857 0.041982 AGACCCCTCAAGACCTCCTC 59.958 60.0 0.0 0.0 0.0 3.71 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
127 129 3.243401 GCTGGTCCGTCAAAATTTTCTGT 60.243 43.478 0.00 0.00 0.00 3.41
233 235 8.367660 TCAGGAATCTACTCTGTAAAATCAGT 57.632 34.615 0.00 0.00 36.85 3.41
245 247 9.469807 CTCTGTAAAATCAGTGTATCATACTCC 57.530 37.037 0.00 0.00 36.85 3.85
250 252 5.798125 ATCAGTGTATCATACTCCTGTGG 57.202 43.478 12.18 0.00 33.26 4.17
436 438 7.443879 TGCAATATCGCCATATCAAAACTCTTA 59.556 33.333 0.00 0.00 0.00 2.10
577 579 2.438975 ATCCGCACACATGGGCTG 60.439 61.111 4.31 0.00 43.67 4.85
612 614 2.226200 CGACCAAATGTTCACAGATGCA 59.774 45.455 0.00 0.00 0.00 3.96
660 662 2.809446 CATAGCATTTGGTCGTCTCGA 58.191 47.619 0.00 0.00 0.00 4.04
777 779 3.411418 GATTCAGTCCGCGAGCCGA 62.411 63.158 8.23 0.00 40.02 5.54
804 809 2.273449 CCGGAAGCAGGCTGGATT 59.727 61.111 17.64 1.63 33.45 3.01
924 929 2.432628 CTCCAAGGCGTGACCGAC 60.433 66.667 0.76 0.00 46.52 4.79
966 971 2.110188 AGCTCTACGGGAAGGGATGATA 59.890 50.000 0.00 0.00 0.00 2.15
972 977 2.174639 ACGGGAAGGGATGATATTTGCA 59.825 45.455 0.00 0.00 0.00 4.08
1059 1064 2.296480 GCGCGGCAACTCTAGATCG 61.296 63.158 8.83 0.00 0.00 3.69
1068 1073 1.186200 ACTCTAGATCGGTTGCAGCA 58.814 50.000 2.05 0.00 0.00 4.41
1079 1084 2.436417 GGTTGCAGCACCTATCTTGAA 58.564 47.619 2.05 0.00 33.50 2.69
1181 1191 2.133281 TGTGCAAGATTAGCCAGCAT 57.867 45.000 0.00 0.00 37.56 3.79
1183 1193 3.208594 TGTGCAAGATTAGCCAGCATAG 58.791 45.455 0.00 0.00 37.56 2.23
1200 1210 2.328819 TAGTAGAGTGGACGGAGAGC 57.671 55.000 0.00 0.00 0.00 4.09
1323 1333 4.404654 CTCGGCCAGCAAAACGCC 62.405 66.667 2.24 0.00 44.04 5.68
1325 1335 4.999939 CGGCCAGCAAAACGCCAC 63.000 66.667 2.24 0.00 43.17 5.01
1326 1336 3.605664 GGCCAGCAAAACGCCACT 61.606 61.111 0.00 0.00 44.04 4.00
1327 1337 2.050077 GCCAGCAAAACGCCACTC 60.050 61.111 0.00 0.00 44.04 3.51
1328 1338 2.555547 GCCAGCAAAACGCCACTCT 61.556 57.895 0.00 0.00 44.04 3.24
1336 1346 3.181516 GCAAAACGCCACTCTCAGATTAG 60.182 47.826 0.00 0.00 32.94 1.73
1347 1357 3.944015 CTCTCAGATTAGTTGGGCTTTGG 59.056 47.826 0.00 0.00 0.00 3.28
1381 1391 5.978322 TGCGTAAGGTATTTGTTTTTGGAAC 59.022 36.000 0.00 0.00 38.28 3.62
1414 1424 0.040157 TGCACAAGAAATCTGCACGC 60.040 50.000 0.00 0.00 36.00 5.34
1432 1442 4.324402 GCACGCAAATCAAAGGTAATCTTG 59.676 41.667 0.00 0.00 35.55 3.02
1464 1474 6.816136 AGTTTCTGTTGGTTATTTTCCTTGG 58.184 36.000 0.00 0.00 0.00 3.61
1493 1503 4.862641 TTTTGGGGAGAGAGAATAAGGG 57.137 45.455 0.00 0.00 0.00 3.95
1524 1534 5.066968 ACAAAACAACTTCACGTTTGGAT 57.933 34.783 3.01 0.00 35.57 3.41
1529 1539 5.668558 ACAACTTCACGTTTGGATAGTTC 57.331 39.130 3.01 0.00 32.27 3.01
1541 1551 6.149474 CGTTTGGATAGTTCTGACTTGGAAAT 59.851 38.462 0.00 0.00 37.33 2.17
1564 1574 3.923563 GAGCAGAGCGAAGGCACGT 62.924 63.158 6.06 0.00 43.41 4.49
1565 1575 2.126071 GCAGAGCGAAGGCACGTA 60.126 61.111 0.00 0.00 43.41 3.57
1578 1592 0.802494 GCACGTACACATTTGGAGGG 59.198 55.000 0.00 0.00 0.00 4.30
1598 1612 3.871594 GGGATATCTCACGTCCAAGTTTG 59.128 47.826 2.05 0.00 33.62 2.93
1629 1643 8.034804 GTCATTTTCATAGGTTGGCTAAAACAT 58.965 33.333 0.00 0.00 0.00 2.71
1661 1675 2.514458 AAGTTGCTACCCCATTGAGG 57.486 50.000 0.00 0.00 37.03 3.86
1667 3388 1.215423 GCTACCCCATTGAGGTTGGAT 59.785 52.381 0.00 0.00 38.89 3.41
1684 3405 5.334879 GGTTGGATGTGCTAGTACTTGTTTG 60.335 44.000 12.42 0.00 0.00 2.93
1698 3419 8.293699 AGTACTTGTTTGTTTGGAGAGAAAAT 57.706 30.769 0.00 0.00 0.00 1.82
1706 3427 5.065914 TGTTTGGAGAGAAAATGGAGTGAG 58.934 41.667 0.00 0.00 0.00 3.51
1736 3457 7.611213 AGGAAGTGGATATAAAGAAAACACG 57.389 36.000 0.00 0.00 32.98 4.49
1737 3458 7.166167 AGGAAGTGGATATAAAGAAAACACGT 58.834 34.615 0.00 0.00 32.98 4.49
1738 3459 7.119262 AGGAAGTGGATATAAAGAAAACACGTG 59.881 37.037 15.48 15.48 32.98 4.49
1751 3472 1.080298 ACACGTGTTGCTTGTTTCGA 58.920 45.000 17.22 0.00 0.00 3.71
1768 3489 1.401199 TCGACGCACAACCGTGATATA 59.599 47.619 0.00 0.00 46.80 0.86
1771 3492 2.534349 GACGCACAACCGTGATATAGTG 59.466 50.000 0.00 0.00 46.80 2.74
1775 3496 3.857052 CACAACCGTGATATAGTGTGGT 58.143 45.455 0.00 0.00 46.80 4.16
1789 3510 1.003718 GTGGTACCCAGTCAGCCAC 60.004 63.158 10.07 0.00 42.03 5.01
1790 3511 2.264794 GGTACCCAGTCAGCCACG 59.735 66.667 0.00 0.00 0.00 4.94
1796 3517 2.029518 CAGTCAGCCACGTCAGCA 59.970 61.111 9.59 0.00 0.00 4.41
1805 3526 0.034059 CCACGTCAGCAGTTTCCTCT 59.966 55.000 0.00 0.00 0.00 3.69
1816 3537 2.814336 CAGTTTCCTCTGGGTAGTTTGC 59.186 50.000 0.00 0.00 0.00 3.68
1834 3555 3.032017 TGCTTCTGCAGTCAGTAGTTC 57.968 47.619 14.67 0.00 45.31 3.01
1842 3563 2.693069 CAGTCAGTAGTTCCAGCTTGG 58.307 52.381 0.00 0.00 39.43 3.61
1851 3572 4.634012 AGTTCCAGCTTGGTTATACACA 57.366 40.909 0.00 0.00 39.03 3.72
1852 3573 4.579869 AGTTCCAGCTTGGTTATACACAG 58.420 43.478 0.00 0.00 39.03 3.66
1856 3578 5.381757 TCCAGCTTGGTTATACACAGTTTT 58.618 37.500 0.00 0.00 39.03 2.43
1864 3586 7.883391 TGGTTATACACAGTTTTTCTTTGGA 57.117 32.000 0.00 0.00 0.00 3.53
1866 3588 8.356657 TGGTTATACACAGTTTTTCTTTGGATG 58.643 33.333 0.00 0.00 30.84 3.51
1887 3609 7.013274 TGGATGCTATTTGTTTTATCCTGCTAC 59.987 37.037 0.00 0.00 36.06 3.58
1889 3611 7.880160 TGCTATTTGTTTTATCCTGCTACAT 57.120 32.000 0.00 0.00 0.00 2.29
1891 3613 7.141363 GCTATTTGTTTTATCCTGCTACATGG 58.859 38.462 0.00 0.00 0.00 3.66
1892 3614 7.013274 GCTATTTGTTTTATCCTGCTACATGGA 59.987 37.037 0.00 0.00 36.72 3.41
1900 3622 2.846206 TCCTGCTACATGGAGTCCATTT 59.154 45.455 22.62 18.56 42.23 2.32
1901 3623 3.266772 TCCTGCTACATGGAGTCCATTTT 59.733 43.478 22.62 14.33 42.23 1.82
1902 3624 4.019174 CCTGCTACATGGAGTCCATTTTT 58.981 43.478 22.62 11.85 42.23 1.94
1928 3650 6.674694 TTTTGAAAAATGGTGTCCATGTTG 57.325 33.333 5.13 0.00 44.40 3.33
1929 3651 5.604758 TTGAAAAATGGTGTCCATGTTGA 57.395 34.783 5.13 0.00 44.40 3.18
1930 3652 5.804944 TGAAAAATGGTGTCCATGTTGAT 57.195 34.783 5.13 0.00 44.40 2.57
1931 3653 5.539979 TGAAAAATGGTGTCCATGTTGATG 58.460 37.500 5.13 0.00 44.40 3.07
1932 3654 5.070180 TGAAAAATGGTGTCCATGTTGATGT 59.930 36.000 5.13 0.00 44.40 3.06
1933 3655 6.266330 TGAAAAATGGTGTCCATGTTGATGTA 59.734 34.615 5.13 0.00 44.40 2.29
1934 3656 5.902613 AAATGGTGTCCATGTTGATGTAG 57.097 39.130 1.86 0.00 44.40 2.74
1935 3657 3.348647 TGGTGTCCATGTTGATGTAGG 57.651 47.619 0.00 0.00 0.00 3.18
1936 3658 2.026356 TGGTGTCCATGTTGATGTAGGG 60.026 50.000 0.00 0.00 0.00 3.53
1937 3659 2.026262 GGTGTCCATGTTGATGTAGGGT 60.026 50.000 0.00 0.00 0.00 4.34
1938 3660 3.009723 GTGTCCATGTTGATGTAGGGTG 58.990 50.000 0.00 0.00 0.00 4.61
1939 3661 2.026356 TGTCCATGTTGATGTAGGGTGG 60.026 50.000 0.00 0.00 0.00 4.61
1940 3662 2.238646 GTCCATGTTGATGTAGGGTGGA 59.761 50.000 0.00 0.00 32.26 4.02
1941 3663 2.916269 TCCATGTTGATGTAGGGTGGAA 59.084 45.455 0.00 0.00 31.81 3.53
1942 3664 3.332187 TCCATGTTGATGTAGGGTGGAAA 59.668 43.478 0.00 0.00 31.81 3.13
1943 3665 3.443681 CCATGTTGATGTAGGGTGGAAAC 59.556 47.826 0.00 0.00 0.00 2.78
1944 3666 3.149005 TGTTGATGTAGGGTGGAAACC 57.851 47.619 0.00 0.00 0.00 3.27
1951 3673 2.681591 GGGTGGAAACCCTAGGGC 59.318 66.667 28.88 12.07 46.39 5.19
1952 3674 1.929088 GGGTGGAAACCCTAGGGCT 60.929 63.158 28.88 13.94 46.39 5.19
1953 3675 1.303282 GGTGGAAACCCTAGGGCTG 59.697 63.158 28.88 4.66 39.32 4.85
1954 3676 1.205460 GGTGGAAACCCTAGGGCTGA 61.205 60.000 28.88 4.54 39.32 4.26
1955 3677 0.919710 GTGGAAACCCTAGGGCTGAT 59.080 55.000 28.88 11.40 39.32 2.90
1956 3678 1.134068 GTGGAAACCCTAGGGCTGATC 60.134 57.143 28.88 19.06 39.32 2.92
1957 3679 1.274416 TGGAAACCCTAGGGCTGATCT 60.274 52.381 28.88 3.75 39.32 2.75
1958 3680 1.847088 GGAAACCCTAGGGCTGATCTT 59.153 52.381 28.88 10.64 39.32 2.40
1959 3681 2.242452 GGAAACCCTAGGGCTGATCTTT 59.758 50.000 28.88 18.80 39.32 2.52
1960 3682 3.546724 GAAACCCTAGGGCTGATCTTTC 58.453 50.000 28.88 22.64 39.32 2.62
1961 3683 2.270434 ACCCTAGGGCTGATCTTTCA 57.730 50.000 28.88 0.00 39.32 2.69
1962 3684 1.840635 ACCCTAGGGCTGATCTTTCAC 59.159 52.381 28.88 0.00 39.32 3.18
1963 3685 1.202580 CCCTAGGGCTGATCTTTCACG 60.203 57.143 16.90 0.00 0.00 4.35
1964 3686 1.757118 CCTAGGGCTGATCTTTCACGA 59.243 52.381 0.00 0.00 0.00 4.35
1965 3687 2.168521 CCTAGGGCTGATCTTTCACGAA 59.831 50.000 0.00 0.00 0.00 3.85
1966 3688 2.859165 AGGGCTGATCTTTCACGAAA 57.141 45.000 0.00 0.00 0.00 3.46
1967 3689 3.356529 AGGGCTGATCTTTCACGAAAT 57.643 42.857 0.00 0.00 0.00 2.17
1968 3690 3.012518 AGGGCTGATCTTTCACGAAATG 58.987 45.455 0.00 0.00 0.00 2.32
1969 3691 2.098117 GGGCTGATCTTTCACGAAATGG 59.902 50.000 0.00 0.00 0.00 3.16
1970 3692 3.009723 GGCTGATCTTTCACGAAATGGA 58.990 45.455 0.00 0.00 0.00 3.41
1971 3693 3.064545 GGCTGATCTTTCACGAAATGGAG 59.935 47.826 0.00 0.00 0.00 3.86
1972 3694 3.935203 GCTGATCTTTCACGAAATGGAGA 59.065 43.478 0.00 0.00 0.00 3.71
1973 3695 4.033817 GCTGATCTTTCACGAAATGGAGAG 59.966 45.833 0.00 0.00 0.00 3.20
1974 3696 4.507710 TGATCTTTCACGAAATGGAGAGG 58.492 43.478 0.00 0.00 0.00 3.69
1975 3697 4.222810 TGATCTTTCACGAAATGGAGAGGA 59.777 41.667 0.00 0.00 0.00 3.71
1976 3698 4.826274 TCTTTCACGAAATGGAGAGGAT 57.174 40.909 0.00 0.00 0.00 3.24
1977 3699 4.759782 TCTTTCACGAAATGGAGAGGATC 58.240 43.478 0.00 0.00 0.00 3.36
1986 3708 3.831651 GGAGAGGATCCTCCGAAGA 57.168 57.895 33.81 0.00 45.64 2.87
1987 3709 2.074729 GGAGAGGATCCTCCGAAGAA 57.925 55.000 33.81 0.00 45.64 2.52
1988 3710 1.684450 GGAGAGGATCCTCCGAAGAAC 59.316 57.143 33.81 17.47 45.64 3.01
1989 3711 2.379972 GAGAGGATCCTCCGAAGAACA 58.620 52.381 33.81 0.00 42.75 3.18
1990 3712 2.100087 GAGAGGATCCTCCGAAGAACAC 59.900 54.545 33.81 9.70 42.75 3.32
1991 3713 0.818296 AGGATCCTCCGAAGAACACG 59.182 55.000 9.02 0.00 42.75 4.49
1992 3714 0.815734 GGATCCTCCGAAGAACACGA 59.184 55.000 3.84 0.00 0.00 4.35
1993 3715 1.203994 GGATCCTCCGAAGAACACGAA 59.796 52.381 3.84 0.00 0.00 3.85
1994 3716 2.531206 GATCCTCCGAAGAACACGAAG 58.469 52.381 0.00 0.00 0.00 3.79
1995 3717 1.612676 TCCTCCGAAGAACACGAAGA 58.387 50.000 0.00 0.00 0.00 2.87
1996 3718 1.958579 TCCTCCGAAGAACACGAAGAA 59.041 47.619 0.00 0.00 0.00 2.52
1997 3719 2.059541 CCTCCGAAGAACACGAAGAAC 58.940 52.381 0.00 0.00 0.00 3.01
1998 3720 2.545113 CCTCCGAAGAACACGAAGAACA 60.545 50.000 0.00 0.00 0.00 3.18
1999 3721 3.318017 CTCCGAAGAACACGAAGAACAT 58.682 45.455 0.00 0.00 0.00 2.71
2000 3722 3.057019 TCCGAAGAACACGAAGAACATG 58.943 45.455 0.00 0.00 0.00 3.21
2001 3723 3.057019 CCGAAGAACACGAAGAACATGA 58.943 45.455 0.00 0.00 0.00 3.07
2002 3724 3.121944 CCGAAGAACACGAAGAACATGAG 59.878 47.826 0.00 0.00 0.00 2.90
2003 3725 3.121944 CGAAGAACACGAAGAACATGAGG 59.878 47.826 0.00 0.00 0.00 3.86
2004 3726 3.045601 AGAACACGAAGAACATGAGGG 57.954 47.619 0.00 0.00 0.00 4.30
2005 3727 2.076863 GAACACGAAGAACATGAGGGG 58.923 52.381 0.00 0.00 0.00 4.79
2006 3728 1.348064 ACACGAAGAACATGAGGGGA 58.652 50.000 0.00 0.00 0.00 4.81
2007 3729 1.697432 ACACGAAGAACATGAGGGGAA 59.303 47.619 0.00 0.00 0.00 3.97
2008 3730 2.105821 ACACGAAGAACATGAGGGGAAA 59.894 45.455 0.00 0.00 0.00 3.13
2009 3731 3.146066 CACGAAGAACATGAGGGGAAAA 58.854 45.455 0.00 0.00 0.00 2.29
2010 3732 3.058224 CACGAAGAACATGAGGGGAAAAC 60.058 47.826 0.00 0.00 0.00 2.43
2011 3733 3.146066 CGAAGAACATGAGGGGAAAACA 58.854 45.455 0.00 0.00 0.00 2.83
2012 3734 3.058224 CGAAGAACATGAGGGGAAAACAC 60.058 47.826 0.00 0.00 0.00 3.32
2013 3735 2.504367 AGAACATGAGGGGAAAACACG 58.496 47.619 0.00 0.00 0.00 4.49
2014 3736 2.105821 AGAACATGAGGGGAAAACACGA 59.894 45.455 0.00 0.00 0.00 4.35
2015 3737 2.185004 ACATGAGGGGAAAACACGAG 57.815 50.000 0.00 0.00 0.00 4.18
2016 3738 1.697432 ACATGAGGGGAAAACACGAGA 59.303 47.619 0.00 0.00 0.00 4.04
2017 3739 2.289694 ACATGAGGGGAAAACACGAGAG 60.290 50.000 0.00 0.00 0.00 3.20
2018 3740 1.712056 TGAGGGGAAAACACGAGAGA 58.288 50.000 0.00 0.00 0.00 3.10
2019 3741 2.043992 TGAGGGGAAAACACGAGAGAA 58.956 47.619 0.00 0.00 0.00 2.87
2020 3742 2.436542 TGAGGGGAAAACACGAGAGAAA 59.563 45.455 0.00 0.00 0.00 2.52
2021 3743 3.118186 TGAGGGGAAAACACGAGAGAAAA 60.118 43.478 0.00 0.00 0.00 2.29
2022 3744 3.477530 AGGGGAAAACACGAGAGAAAAG 58.522 45.455 0.00 0.00 0.00 2.27
2023 3745 3.135895 AGGGGAAAACACGAGAGAAAAGA 59.864 43.478 0.00 0.00 0.00 2.52
2024 3746 3.250280 GGGGAAAACACGAGAGAAAAGAC 59.750 47.826 0.00 0.00 0.00 3.01
2025 3747 3.875134 GGGAAAACACGAGAGAAAAGACA 59.125 43.478 0.00 0.00 0.00 3.41
2026 3748 4.260661 GGGAAAACACGAGAGAAAAGACAC 60.261 45.833 0.00 0.00 0.00 3.67
2027 3749 4.571176 GGAAAACACGAGAGAAAAGACACT 59.429 41.667 0.00 0.00 0.00 3.55
2028 3750 5.276915 GGAAAACACGAGAGAAAAGACACTC 60.277 44.000 0.00 0.00 0.00 3.51
2029 3751 4.386867 AACACGAGAGAAAAGACACTCA 57.613 40.909 0.00 0.00 35.83 3.41
2030 3752 4.386867 ACACGAGAGAAAAGACACTCAA 57.613 40.909 0.00 0.00 35.83 3.02
2031 3753 4.755411 ACACGAGAGAAAAGACACTCAAA 58.245 39.130 0.00 0.00 35.83 2.69
2032 3754 5.360591 ACACGAGAGAAAAGACACTCAAAT 58.639 37.500 0.00 0.00 35.83 2.32
2033 3755 5.463724 ACACGAGAGAAAAGACACTCAAATC 59.536 40.000 0.00 0.00 35.83 2.17
2034 3756 5.463392 CACGAGAGAAAAGACACTCAAATCA 59.537 40.000 0.00 0.00 35.83 2.57
2035 3757 6.018751 CACGAGAGAAAAGACACTCAAATCAA 60.019 38.462 0.00 0.00 35.83 2.57
2036 3758 6.018669 ACGAGAGAAAAGACACTCAAATCAAC 60.019 38.462 0.00 0.00 35.83 3.18
2037 3759 6.292389 AGAGAAAAGACACTCAAATCAACG 57.708 37.500 0.00 0.00 35.83 4.10
2038 3760 6.049149 AGAGAAAAGACACTCAAATCAACGA 58.951 36.000 0.00 0.00 35.83 3.85
2039 3761 6.201806 AGAGAAAAGACACTCAAATCAACGAG 59.798 38.462 0.00 0.00 35.83 4.18
2040 3762 6.049149 AGAAAAGACACTCAAATCAACGAGA 58.951 36.000 0.00 0.00 33.33 4.04
2041 3763 6.538742 AGAAAAGACACTCAAATCAACGAGAA 59.461 34.615 0.00 0.00 33.33 2.87
2042 3764 5.659048 AAGACACTCAAATCAACGAGAAC 57.341 39.130 0.00 0.00 33.33 3.01
2043 3765 4.693283 AGACACTCAAATCAACGAGAACA 58.307 39.130 0.00 0.00 33.33 3.18
2044 3766 5.116180 AGACACTCAAATCAACGAGAACAA 58.884 37.500 0.00 0.00 33.33 2.83
2045 3767 5.760253 AGACACTCAAATCAACGAGAACAAT 59.240 36.000 0.00 0.00 33.33 2.71
2046 3768 5.990408 ACACTCAAATCAACGAGAACAATC 58.010 37.500 0.00 0.00 33.33 2.67
2047 3769 5.527214 ACACTCAAATCAACGAGAACAATCA 59.473 36.000 0.00 0.00 33.33 2.57
2048 3770 5.848036 CACTCAAATCAACGAGAACAATCAC 59.152 40.000 0.00 0.00 33.33 3.06
2049 3771 5.527214 ACTCAAATCAACGAGAACAATCACA 59.473 36.000 0.00 0.00 33.33 3.58
2050 3772 5.747565 TCAAATCAACGAGAACAATCACAC 58.252 37.500 0.00 0.00 0.00 3.82
2051 3773 5.295540 TCAAATCAACGAGAACAATCACACA 59.704 36.000 0.00 0.00 0.00 3.72
2052 3774 5.947228 AATCAACGAGAACAATCACACAT 57.053 34.783 0.00 0.00 0.00 3.21
2053 3775 4.730600 TCAACGAGAACAATCACACATG 57.269 40.909 0.00 0.00 0.00 3.21
2054 3776 4.126437 TCAACGAGAACAATCACACATGT 58.874 39.130 0.00 0.00 0.00 3.21
2055 3777 4.024977 TCAACGAGAACAATCACACATGTG 60.025 41.667 24.25 24.25 46.91 3.21
2056 3778 2.224079 ACGAGAACAATCACACATGTGC 59.776 45.455 25.68 6.73 45.25 4.57
2057 3779 2.481568 CGAGAACAATCACACATGTGCT 59.518 45.455 25.68 11.62 45.25 4.40
2058 3780 3.679502 CGAGAACAATCACACATGTGCTA 59.320 43.478 25.68 14.15 45.25 3.49
2059 3781 4.201656 CGAGAACAATCACACATGTGCTAG 60.202 45.833 25.68 15.48 45.25 3.42
2060 3782 4.898320 AGAACAATCACACATGTGCTAGA 58.102 39.130 25.68 20.00 45.25 2.43
2061 3783 5.494724 AGAACAATCACACATGTGCTAGAT 58.505 37.500 25.68 21.22 45.25 1.98
2062 3784 5.583854 AGAACAATCACACATGTGCTAGATC 59.416 40.000 25.68 14.46 45.25 2.75
2063 3785 4.194640 ACAATCACACATGTGCTAGATCC 58.805 43.478 25.68 0.00 45.25 3.36
2064 3786 4.193865 CAATCACACATGTGCTAGATCCA 58.806 43.478 25.68 1.26 45.25 3.41
2065 3787 4.701651 ATCACACATGTGCTAGATCCAT 57.298 40.909 25.68 0.00 45.25 3.41
2066 3788 3.800531 TCACACATGTGCTAGATCCATG 58.199 45.455 25.68 12.71 45.25 3.66
2067 3789 3.451902 TCACACATGTGCTAGATCCATGA 59.548 43.478 25.68 14.79 45.25 3.07
2068 3790 4.080975 TCACACATGTGCTAGATCCATGAA 60.081 41.667 25.68 1.48 45.25 2.57
2069 3791 4.034858 CACACATGTGCTAGATCCATGAAC 59.965 45.833 25.68 0.00 38.56 3.18
2070 3792 4.193865 CACATGTGCTAGATCCATGAACA 58.806 43.478 13.94 5.03 38.56 3.18
2071 3793 4.820173 CACATGTGCTAGATCCATGAACAT 59.180 41.667 13.94 6.87 38.56 2.71
2072 3794 5.993441 CACATGTGCTAGATCCATGAACATA 59.007 40.000 13.94 0.00 38.56 2.29
2073 3795 6.484308 CACATGTGCTAGATCCATGAACATAA 59.516 38.462 13.94 0.00 38.56 1.90
2074 3796 7.012610 CACATGTGCTAGATCCATGAACATAAA 59.987 37.037 13.94 0.00 38.56 1.40
2075 3797 7.228108 ACATGTGCTAGATCCATGAACATAAAG 59.772 37.037 18.09 2.39 38.56 1.85
2076 3798 6.888105 TGTGCTAGATCCATGAACATAAAGA 58.112 36.000 0.00 0.00 0.00 2.52
2077 3799 6.988580 TGTGCTAGATCCATGAACATAAAGAG 59.011 38.462 0.00 0.00 0.00 2.85
2078 3800 6.989169 GTGCTAGATCCATGAACATAAAGAGT 59.011 38.462 0.00 0.00 0.00 3.24
2079 3801 6.988580 TGCTAGATCCATGAACATAAAGAGTG 59.011 38.462 0.00 0.00 0.00 3.51
2080 3802 7.147672 TGCTAGATCCATGAACATAAAGAGTGA 60.148 37.037 0.00 0.00 0.00 3.41
2081 3803 7.877097 GCTAGATCCATGAACATAAAGAGTGAT 59.123 37.037 0.00 0.00 0.00 3.06
2084 3806 8.708378 AGATCCATGAACATAAAGAGTGATACA 58.292 33.333 0.00 0.00 0.00 2.29
2085 3807 9.330063 GATCCATGAACATAAAGAGTGATACAA 57.670 33.333 0.00 0.00 0.00 2.41
2086 3808 8.722480 TCCATGAACATAAAGAGTGATACAAG 57.278 34.615 0.00 0.00 0.00 3.16
2087 3809 8.539544 TCCATGAACATAAAGAGTGATACAAGA 58.460 33.333 0.00 0.00 0.00 3.02
2088 3810 9.334947 CCATGAACATAAAGAGTGATACAAGAT 57.665 33.333 0.00 0.00 0.00 2.40
2098 3820 9.778741 AAAGAGTGATACAAGATCTAAACACAA 57.221 29.630 0.00 0.00 0.00 3.33
2099 3821 8.764524 AGAGTGATACAAGATCTAAACACAAC 57.235 34.615 0.00 2.67 0.00 3.32
2100 3822 8.367911 AGAGTGATACAAGATCTAAACACAACA 58.632 33.333 0.00 0.00 0.00 3.33
2101 3823 8.902540 AGTGATACAAGATCTAAACACAACAA 57.097 30.769 0.00 0.00 0.00 2.83
2102 3824 9.337396 AGTGATACAAGATCTAAACACAACAAA 57.663 29.630 0.00 0.00 0.00 2.83
2103 3825 9.599322 GTGATACAAGATCTAAACACAACAAAG 57.401 33.333 0.00 0.00 0.00 2.77
2104 3826 8.783093 TGATACAAGATCTAAACACAACAAAGG 58.217 33.333 0.00 0.00 0.00 3.11
2105 3827 8.918202 ATACAAGATCTAAACACAACAAAGGA 57.082 30.769 0.00 0.00 0.00 3.36
2106 3828 7.027778 ACAAGATCTAAACACAACAAAGGAC 57.972 36.000 0.00 0.00 0.00 3.85
2107 3829 5.924475 AGATCTAAACACAACAAAGGACG 57.076 39.130 0.00 0.00 0.00 4.79
2108 3830 5.607477 AGATCTAAACACAACAAAGGACGA 58.393 37.500 0.00 0.00 0.00 4.20
2109 3831 6.231211 AGATCTAAACACAACAAAGGACGAT 58.769 36.000 0.00 0.00 0.00 3.73
2110 3832 7.383687 AGATCTAAACACAACAAAGGACGATA 58.616 34.615 0.00 0.00 0.00 2.92
2111 3833 6.774354 TCTAAACACAACAAAGGACGATAC 57.226 37.500 0.00 0.00 0.00 2.24
2112 3834 6.282167 TCTAAACACAACAAAGGACGATACA 58.718 36.000 0.00 0.00 0.00 2.29
2113 3835 5.821516 AAACACAACAAAGGACGATACAA 57.178 34.783 0.00 0.00 0.00 2.41
2114 3836 5.821516 AACACAACAAAGGACGATACAAA 57.178 34.783 0.00 0.00 0.00 2.83
2115 3837 5.821516 ACACAACAAAGGACGATACAAAA 57.178 34.783 0.00 0.00 0.00 2.44
2116 3838 5.816919 ACACAACAAAGGACGATACAAAAG 58.183 37.500 0.00 0.00 0.00 2.27
2117 3839 5.212194 CACAACAAAGGACGATACAAAAGG 58.788 41.667 0.00 0.00 0.00 3.11
2118 3840 4.226761 CAACAAAGGACGATACAAAAGGC 58.773 43.478 0.00 0.00 0.00 4.35
2119 3841 2.482721 ACAAAGGACGATACAAAAGGCG 59.517 45.455 0.00 0.00 0.00 5.52
2120 3842 1.734163 AAGGACGATACAAAAGGCGG 58.266 50.000 0.00 0.00 0.00 6.13
2121 3843 0.611714 AGGACGATACAAAAGGCGGT 59.388 50.000 0.00 0.00 0.00 5.68
2122 3844 1.826720 AGGACGATACAAAAGGCGGTA 59.173 47.619 0.00 0.00 0.00 4.02
2123 3845 2.159142 AGGACGATACAAAAGGCGGTAG 60.159 50.000 0.00 0.00 0.00 3.18
2124 3846 2.417787 GGACGATACAAAAGGCGGTAGT 60.418 50.000 0.00 0.00 0.00 2.73
2125 3847 3.256558 GACGATACAAAAGGCGGTAGTT 58.743 45.455 0.00 0.00 0.00 2.24
2126 3848 3.256558 ACGATACAAAAGGCGGTAGTTC 58.743 45.455 0.00 0.00 0.00 3.01
2127 3849 3.056322 ACGATACAAAAGGCGGTAGTTCT 60.056 43.478 0.00 0.00 0.00 3.01
2128 3850 3.930848 CGATACAAAAGGCGGTAGTTCTT 59.069 43.478 0.00 0.00 0.00 2.52
2129 3851 4.032558 CGATACAAAAGGCGGTAGTTCTTC 59.967 45.833 0.00 0.00 0.00 2.87
2130 3852 3.487120 ACAAAAGGCGGTAGTTCTTCT 57.513 42.857 0.00 0.00 0.00 2.85
2131 3853 3.400255 ACAAAAGGCGGTAGTTCTTCTC 58.600 45.455 0.00 0.00 0.00 2.87
2132 3854 2.742589 CAAAAGGCGGTAGTTCTTCTCC 59.257 50.000 0.00 0.00 0.00 3.71
2133 3855 1.640917 AAGGCGGTAGTTCTTCTCCA 58.359 50.000 0.00 0.00 0.00 3.86
2134 3856 1.867363 AGGCGGTAGTTCTTCTCCAT 58.133 50.000 0.00 0.00 0.00 3.41
2135 3857 1.482593 AGGCGGTAGTTCTTCTCCATG 59.517 52.381 0.00 0.00 0.00 3.66
2136 3858 1.480954 GGCGGTAGTTCTTCTCCATGA 59.519 52.381 0.00 0.00 0.00 3.07
2137 3859 2.482142 GGCGGTAGTTCTTCTCCATGAG 60.482 54.545 0.00 0.00 0.00 2.90
2138 3860 2.482142 GCGGTAGTTCTTCTCCATGAGG 60.482 54.545 0.00 0.00 0.00 3.86
2139 3861 3.024547 CGGTAGTTCTTCTCCATGAGGA 58.975 50.000 0.00 0.00 43.21 3.71
2149 3871 1.871418 TCCATGAGGAGGTCTTGAGG 58.129 55.000 0.00 0.00 39.61 3.86
2150 3872 0.835941 CCATGAGGAGGTCTTGAGGG 59.164 60.000 0.00 0.00 36.89 4.30
2151 3873 0.835941 CATGAGGAGGTCTTGAGGGG 59.164 60.000 0.00 0.00 33.05 4.79
2152 3874 0.419459 ATGAGGAGGTCTTGAGGGGT 59.581 55.000 0.00 0.00 0.00 4.95
2153 3875 0.252284 TGAGGAGGTCTTGAGGGGTC 60.252 60.000 0.00 0.00 0.00 4.46
2154 3876 0.041982 GAGGAGGTCTTGAGGGGTCT 59.958 60.000 0.00 0.00 0.00 3.85
2155 3877 0.494095 AGGAGGTCTTGAGGGGTCTT 59.506 55.000 0.00 0.00 0.00 3.01
2156 3878 0.906066 GGAGGTCTTGAGGGGTCTTC 59.094 60.000 0.00 0.00 0.00 2.87
2157 3879 0.906066 GAGGTCTTGAGGGGTCTTCC 59.094 60.000 0.00 0.00 0.00 3.46
2158 3880 0.494095 AGGTCTTGAGGGGTCTTCCT 59.506 55.000 0.00 0.00 40.43 3.36
2159 3881 0.615850 GGTCTTGAGGGGTCTTCCTG 59.384 60.000 0.00 0.00 37.25 3.86
2160 3882 1.353091 GTCTTGAGGGGTCTTCCTGT 58.647 55.000 0.00 0.00 37.25 4.00
2161 3883 1.002544 GTCTTGAGGGGTCTTCCTGTG 59.997 57.143 0.00 0.00 37.25 3.66
2162 3884 1.132849 TCTTGAGGGGTCTTCCTGTGA 60.133 52.381 0.00 0.00 37.25 3.58
2163 3885 1.277557 CTTGAGGGGTCTTCCTGTGAG 59.722 57.143 0.00 0.00 37.25 3.51
2164 3886 0.545309 TGAGGGGTCTTCCTGTGAGG 60.545 60.000 0.00 0.00 37.25 3.86
2165 3887 1.229658 AGGGGTCTTCCTGTGAGGG 60.230 63.158 0.00 0.00 35.59 4.30
2166 3888 2.301738 GGGGTCTTCCTGTGAGGGG 61.302 68.421 0.00 0.00 35.59 4.79
2167 3889 1.539124 GGGTCTTCCTGTGAGGGGT 60.539 63.158 0.00 0.00 35.59 4.95
2168 3890 1.554583 GGGTCTTCCTGTGAGGGGTC 61.555 65.000 0.00 0.00 35.59 4.46
2169 3891 0.545548 GGTCTTCCTGTGAGGGGTCT 60.546 60.000 0.00 0.00 35.59 3.85
2170 3892 1.353091 GTCTTCCTGTGAGGGGTCTT 58.647 55.000 0.00 0.00 35.59 3.01
2171 3893 1.002544 GTCTTCCTGTGAGGGGTCTTG 59.997 57.143 0.00 0.00 35.59 3.02
2172 3894 1.132849 TCTTCCTGTGAGGGGTCTTGA 60.133 52.381 0.00 0.00 35.59 3.02
2173 3895 1.699634 CTTCCTGTGAGGGGTCTTGAA 59.300 52.381 0.00 0.00 35.59 2.69
2174 3896 2.044793 TCCTGTGAGGGGTCTTGAAT 57.955 50.000 0.00 0.00 35.59 2.57
2175 3897 1.909302 TCCTGTGAGGGGTCTTGAATC 59.091 52.381 0.00 0.00 35.59 2.52
2176 3898 1.065126 CCTGTGAGGGGTCTTGAATCC 60.065 57.143 0.00 0.00 0.00 3.01
2177 3899 1.630369 CTGTGAGGGGTCTTGAATCCA 59.370 52.381 0.00 0.00 0.00 3.41
2178 3900 1.351017 TGTGAGGGGTCTTGAATCCAC 59.649 52.381 0.00 0.00 0.00 4.02
2179 3901 1.630878 GTGAGGGGTCTTGAATCCACT 59.369 52.381 0.00 0.00 40.53 4.00
2180 3902 2.040412 GTGAGGGGTCTTGAATCCACTT 59.960 50.000 0.00 0.00 37.62 3.16
2181 3903 2.040278 TGAGGGGTCTTGAATCCACTTG 59.960 50.000 0.00 0.00 37.62 3.16
2182 3904 1.355720 AGGGGTCTTGAATCCACTTGG 59.644 52.381 0.00 0.00 33.09 3.61
2183 3905 1.616994 GGGGTCTTGAATCCACTTGGG 60.617 57.143 0.00 0.00 35.41 4.12
2184 3906 1.616994 GGGTCTTGAATCCACTTGGGG 60.617 57.143 0.00 0.00 37.22 4.96
2185 3907 1.616994 GGTCTTGAATCCACTTGGGGG 60.617 57.143 0.00 0.00 37.22 5.40
2186 3908 1.354368 GTCTTGAATCCACTTGGGGGA 59.646 52.381 0.00 0.00 39.14 4.81
2188 3910 2.242196 TCTTGAATCCACTTGGGGGATC 59.758 50.000 1.50 0.00 44.30 3.36
2189 3911 1.985622 TGAATCCACTTGGGGGATCT 58.014 50.000 1.50 0.00 44.30 2.75
2190 3912 2.287584 TGAATCCACTTGGGGGATCTT 58.712 47.619 1.50 0.00 44.30 2.40
2191 3913 2.242196 TGAATCCACTTGGGGGATCTTC 59.758 50.000 1.50 0.00 44.30 2.87
2192 3914 2.293598 ATCCACTTGGGGGATCTTCT 57.706 50.000 0.00 0.00 41.26 2.85
2193 3915 1.584724 TCCACTTGGGGGATCTTCTC 58.415 55.000 0.00 0.00 37.22 2.87
2194 3916 0.548510 CCACTTGGGGGATCTTCTCC 59.451 60.000 0.00 0.00 44.11 3.71
2195 3917 0.179000 CACTTGGGGGATCTTCTCCG 59.821 60.000 0.00 0.00 46.01 4.63
2196 3918 0.252742 ACTTGGGGGATCTTCTCCGT 60.253 55.000 0.00 0.00 46.01 4.69
2197 3919 1.007963 ACTTGGGGGATCTTCTCCGTA 59.992 52.381 0.00 0.00 46.01 4.02
2198 3920 1.689273 CTTGGGGGATCTTCTCCGTAG 59.311 57.143 0.00 0.00 46.01 3.51
2199 3921 0.931468 TGGGGGATCTTCTCCGTAGA 59.069 55.000 0.00 0.00 46.01 2.59
2200 3922 1.133450 TGGGGGATCTTCTCCGTAGAG 60.133 57.143 0.00 0.00 46.01 2.43
2201 3923 1.623163 GGGGATCTTCTCCGTAGAGG 58.377 60.000 0.00 0.00 46.01 3.69
2202 3924 1.133419 GGGGATCTTCTCCGTAGAGGT 60.133 57.143 0.00 0.00 46.01 3.85
2203 3925 2.232399 GGGATCTTCTCCGTAGAGGTC 58.768 57.143 0.00 0.00 46.01 3.85
2204 3926 1.874872 GGATCTTCTCCGTAGAGGTCG 59.125 57.143 0.00 0.00 40.83 4.79
2205 3927 2.563702 GATCTTCTCCGTAGAGGTCGT 58.436 52.381 0.00 0.00 40.83 4.34
2206 3928 1.735386 TCTTCTCCGTAGAGGTCGTG 58.265 55.000 0.00 0.00 40.83 4.35
2207 3929 1.277273 TCTTCTCCGTAGAGGTCGTGA 59.723 52.381 0.00 0.00 40.83 4.35
2208 3930 2.082231 CTTCTCCGTAGAGGTCGTGAA 58.918 52.381 0.00 0.00 40.83 3.18
2209 3931 2.414994 TCTCCGTAGAGGTCGTGAAT 57.585 50.000 0.00 0.00 40.83 2.57
2210 3932 2.719739 TCTCCGTAGAGGTCGTGAATT 58.280 47.619 0.00 0.00 40.83 2.17
2211 3933 2.681848 TCTCCGTAGAGGTCGTGAATTC 59.318 50.000 0.00 0.00 40.83 2.17
2212 3934 1.747355 TCCGTAGAGGTCGTGAATTCC 59.253 52.381 2.27 0.00 41.99 3.01
2213 3935 1.533338 CCGTAGAGGTCGTGAATTCCG 60.533 57.143 2.27 6.50 34.51 4.30
2214 3936 1.399440 CGTAGAGGTCGTGAATTCCGA 59.601 52.381 12.97 12.97 0.00 4.55
2215 3937 2.033049 CGTAGAGGTCGTGAATTCCGAT 59.967 50.000 17.91 7.07 36.62 4.18
2216 3938 2.586258 AGAGGTCGTGAATTCCGATG 57.414 50.000 17.91 1.37 36.62 3.84
2217 3939 1.137086 AGAGGTCGTGAATTCCGATGG 59.863 52.381 17.91 0.00 36.62 3.51
2218 3940 1.136305 GAGGTCGTGAATTCCGATGGA 59.864 52.381 17.91 0.97 36.62 3.41
2219 3941 1.137086 AGGTCGTGAATTCCGATGGAG 59.863 52.381 17.91 0.00 36.62 3.86
2220 3942 1.136305 GGTCGTGAATTCCGATGGAGA 59.864 52.381 17.91 0.18 36.62 3.71
2221 3943 2.418197 GGTCGTGAATTCCGATGGAGAA 60.418 50.000 17.91 0.00 36.62 2.87
2222 3944 2.860735 GTCGTGAATTCCGATGGAGAAG 59.139 50.000 17.91 0.00 36.62 2.85
2223 3945 2.159099 TCGTGAATTCCGATGGAGAAGG 60.159 50.000 12.97 0.00 31.21 3.46
2224 3946 2.418746 CGTGAATTCCGATGGAGAAGGT 60.419 50.000 2.27 0.00 31.21 3.50
2225 3947 3.181479 CGTGAATTCCGATGGAGAAGGTA 60.181 47.826 2.27 0.00 31.21 3.08
2226 3948 4.501571 CGTGAATTCCGATGGAGAAGGTAT 60.502 45.833 2.27 0.00 31.21 2.73
2227 3949 4.991687 GTGAATTCCGATGGAGAAGGTATC 59.008 45.833 2.27 0.00 31.21 2.24
2228 3950 3.944055 ATTCCGATGGAGAAGGTATCG 57.056 47.619 0.00 0.00 42.31 2.92
2229 3951 2.651382 TCCGATGGAGAAGGTATCGA 57.349 50.000 7.35 0.00 44.64 3.59
2230 3952 2.505405 TCCGATGGAGAAGGTATCGAG 58.495 52.381 7.35 0.00 44.64 4.04
2231 3953 2.158652 TCCGATGGAGAAGGTATCGAGT 60.159 50.000 7.35 0.00 44.64 4.18
2232 3954 2.030717 CCGATGGAGAAGGTATCGAGTG 60.031 54.545 7.35 0.00 44.64 3.51
2233 3955 2.030717 CGATGGAGAAGGTATCGAGTGG 60.031 54.545 0.00 0.00 44.64 4.00
2234 3956 2.820728 TGGAGAAGGTATCGAGTGGA 57.179 50.000 0.00 0.00 0.00 4.02
2235 3957 3.314307 TGGAGAAGGTATCGAGTGGAT 57.686 47.619 0.00 0.00 39.25 3.41
2236 3958 2.959030 TGGAGAAGGTATCGAGTGGATG 59.041 50.000 0.00 0.00 36.55 3.51
2237 3959 3.223435 GGAGAAGGTATCGAGTGGATGA 58.777 50.000 0.00 0.00 36.55 2.92
2238 3960 3.254657 GGAGAAGGTATCGAGTGGATGAG 59.745 52.174 0.00 0.00 36.55 2.90
2239 3961 3.226777 AGAAGGTATCGAGTGGATGAGG 58.773 50.000 0.00 0.00 36.55 3.86
2240 3962 3.117474 AGAAGGTATCGAGTGGATGAGGA 60.117 47.826 0.00 0.00 36.55 3.71
2241 3963 3.314307 AGGTATCGAGTGGATGAGGAA 57.686 47.619 0.00 0.00 36.55 3.36
2242 3964 3.643237 AGGTATCGAGTGGATGAGGAAA 58.357 45.455 0.00 0.00 36.55 3.13
2243 3965 3.639094 AGGTATCGAGTGGATGAGGAAAG 59.361 47.826 0.00 0.00 36.55 2.62
2244 3966 2.611225 ATCGAGTGGATGAGGAAAGC 57.389 50.000 0.00 0.00 32.92 3.51
2245 3967 1.561643 TCGAGTGGATGAGGAAAGCT 58.438 50.000 0.00 0.00 0.00 3.74
2246 3968 1.478510 TCGAGTGGATGAGGAAAGCTC 59.521 52.381 0.00 0.00 0.00 4.09
2247 3969 1.480137 CGAGTGGATGAGGAAAGCTCT 59.520 52.381 0.00 0.00 0.00 4.09
2248 3970 2.690497 CGAGTGGATGAGGAAAGCTCTA 59.310 50.000 0.00 0.00 0.00 2.43
2249 3971 3.320541 CGAGTGGATGAGGAAAGCTCTAT 59.679 47.826 0.00 0.00 0.00 1.98
2250 3972 4.558496 CGAGTGGATGAGGAAAGCTCTATC 60.558 50.000 0.00 0.00 0.00 2.08
2251 3973 4.555689 AGTGGATGAGGAAAGCTCTATCT 58.444 43.478 0.00 0.00 0.00 1.98
2252 3974 4.588528 AGTGGATGAGGAAAGCTCTATCTC 59.411 45.833 0.00 0.00 0.00 2.75
2253 3975 4.588528 GTGGATGAGGAAAGCTCTATCTCT 59.411 45.833 0.00 0.00 0.00 3.10
2254 3976 4.832266 TGGATGAGGAAAGCTCTATCTCTC 59.168 45.833 0.00 0.00 0.00 3.20
2255 3977 4.832266 GGATGAGGAAAGCTCTATCTCTCA 59.168 45.833 12.91 12.91 34.83 3.27
2256 3978 5.304101 GGATGAGGAAAGCTCTATCTCTCAA 59.696 44.000 13.79 4.80 34.17 3.02
2257 3979 6.183360 GGATGAGGAAAGCTCTATCTCTCAAA 60.183 42.308 13.79 1.07 34.17 2.69
2258 3980 6.805016 TGAGGAAAGCTCTATCTCTCAAAT 57.195 37.500 0.00 0.00 0.00 2.32
2259 3981 6.580788 TGAGGAAAGCTCTATCTCTCAAATG 58.419 40.000 0.00 0.00 0.00 2.32
2260 3982 6.382282 TGAGGAAAGCTCTATCTCTCAAATGA 59.618 38.462 0.00 0.00 0.00 2.57
2261 3983 6.819284 AGGAAAGCTCTATCTCTCAAATGAG 58.181 40.000 3.99 3.99 43.36 2.90
2262 3984 5.466393 GGAAAGCTCTATCTCTCAAATGAGC 59.534 44.000 5.53 0.00 44.85 4.26
2267 3989 7.816945 GCTCTATCTCTCAAATGAGCTAATC 57.183 40.000 5.53 0.00 42.28 1.75
2268 3990 6.813152 GCTCTATCTCTCAAATGAGCTAATCC 59.187 42.308 5.53 0.00 42.28 3.01
2269 3991 7.309990 GCTCTATCTCTCAAATGAGCTAATCCT 60.310 40.741 5.53 0.00 42.28 3.24
2270 3992 8.489676 TCTATCTCTCAAATGAGCTAATCCTT 57.510 34.615 5.53 0.00 41.80 3.36
2271 3993 8.932610 TCTATCTCTCAAATGAGCTAATCCTTT 58.067 33.333 5.53 0.00 41.80 3.11
2272 3994 7.804843 ATCTCTCAAATGAGCTAATCCTTTG 57.195 36.000 5.53 0.00 41.99 2.77
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
127 129 1.344953 ATGGCTTCCACATCCGGCTA 61.345 55.000 0.00 0.00 35.80 3.93
233 235 2.623416 CGAGCCACAGGAGTATGATACA 59.377 50.000 5.28 0.00 0.00 2.29
239 241 0.108138 GTTGCGAGCCACAGGAGTAT 60.108 55.000 0.00 0.00 0.00 2.12
436 438 3.243569 GCCTTACAGATATCGCACAGACT 60.244 47.826 0.00 0.00 0.00 3.24
577 579 6.281405 ACATTTGGTCGAGTAAGATATCACC 58.719 40.000 5.32 2.43 0.00 4.02
612 614 7.506971 TGATTGTGATGATCTTGCTTCTATCT 58.493 34.615 0.00 0.00 0.00 1.98
715 717 5.755375 CCATAATTGCTAGTGTCTCGTGAAT 59.245 40.000 0.00 0.00 0.00 2.57
777 779 2.257409 CTGCTTCCGGTGGTAGCCAT 62.257 60.000 11.27 0.00 43.91 4.40
782 787 2.606519 AGCCTGCTTCCGGTGGTA 60.607 61.111 0.00 0.00 0.00 3.25
804 809 2.100797 CCGTCGGCGTTGATCGTA 59.899 61.111 9.28 0.00 42.13 3.43
831 836 0.254178 CCCCCTTCATGTCCTCAGTG 59.746 60.000 0.00 0.00 0.00 3.66
912 917 3.236003 GAAAGGGTCGGTCACGCCT 62.236 63.158 0.00 0.00 38.79 5.52
924 929 0.453390 GAAGCTCCGCAATGAAAGGG 59.547 55.000 0.00 0.00 0.00 3.95
966 971 1.538047 ATCCACGAAGCTGTGCAAAT 58.462 45.000 0.00 0.00 38.55 2.32
972 977 1.344438 TGTGAGAATCCACGAAGCTGT 59.656 47.619 0.00 0.00 39.80 4.40
1011 1016 5.070001 CAGAGGTTAACCAAATCCTGACAA 58.930 41.667 26.26 0.00 38.89 3.18
1059 1064 2.113860 TCAAGATAGGTGCTGCAACC 57.886 50.000 15.18 13.09 40.85 3.77
1068 1073 5.507637 TCCTCTAACTCGTTCAAGATAGGT 58.492 41.667 0.00 0.00 0.00 3.08
1079 1084 4.528920 AGCACTAATCTCCTCTAACTCGT 58.471 43.478 0.00 0.00 0.00 4.18
1181 1191 1.838715 AGCTCTCCGTCCACTCTACTA 59.161 52.381 0.00 0.00 0.00 1.82
1183 1193 0.736053 CAGCTCTCCGTCCACTCTAC 59.264 60.000 0.00 0.00 0.00 2.59
1200 1210 0.179116 CAGGACTCACATCGAGCCAG 60.179 60.000 0.00 0.00 46.63 4.85
1215 1225 2.130193 CAGGGATGGAGGAATTCAGGA 58.870 52.381 7.93 0.00 0.00 3.86
1306 1316 4.404654 GGCGTTTTGCTGGCCGAG 62.405 66.667 0.00 0.00 45.43 4.63
1310 1320 2.050077 GAGTGGCGTTTTGCTGGC 60.050 61.111 0.00 0.00 45.43 4.85
1311 1321 1.165907 TGAGAGTGGCGTTTTGCTGG 61.166 55.000 0.00 0.00 45.43 4.85
1312 1322 0.236711 CTGAGAGTGGCGTTTTGCTG 59.763 55.000 0.00 0.00 45.43 4.41
1313 1323 0.106708 TCTGAGAGTGGCGTTTTGCT 59.893 50.000 0.00 0.00 45.43 3.91
1314 1324 1.160137 ATCTGAGAGTGGCGTTTTGC 58.840 50.000 0.00 0.00 45.38 3.68
1315 1325 3.997021 ACTAATCTGAGAGTGGCGTTTTG 59.003 43.478 0.00 0.00 0.00 2.44
1316 1326 4.273148 ACTAATCTGAGAGTGGCGTTTT 57.727 40.909 0.00 0.00 0.00 2.43
1317 1327 3.963428 ACTAATCTGAGAGTGGCGTTT 57.037 42.857 0.00 0.00 0.00 3.60
1318 1328 3.589988 CAACTAATCTGAGAGTGGCGTT 58.410 45.455 0.00 0.00 0.00 4.84
1319 1329 2.093973 CCAACTAATCTGAGAGTGGCGT 60.094 50.000 0.00 0.00 0.00 5.68
1320 1330 2.544685 CCAACTAATCTGAGAGTGGCG 58.455 52.381 0.00 0.00 0.00 5.69
1321 1331 2.911484 CCCAACTAATCTGAGAGTGGC 58.089 52.381 0.00 0.00 0.00 5.01
1322 1332 2.503356 AGCCCAACTAATCTGAGAGTGG 59.497 50.000 0.00 0.00 0.00 4.00
1323 1333 3.902881 AGCCCAACTAATCTGAGAGTG 57.097 47.619 0.00 0.00 0.00 3.51
1324 1334 4.566488 CCAAAGCCCAACTAATCTGAGAGT 60.566 45.833 0.00 0.00 0.00 3.24
1325 1335 3.944015 CCAAAGCCCAACTAATCTGAGAG 59.056 47.826 0.00 0.00 0.00 3.20
1326 1336 3.587061 TCCAAAGCCCAACTAATCTGAGA 59.413 43.478 0.00 0.00 0.00 3.27
1327 1337 3.955471 TCCAAAGCCCAACTAATCTGAG 58.045 45.455 0.00 0.00 0.00 3.35
1328 1338 4.380843 TTCCAAAGCCCAACTAATCTGA 57.619 40.909 0.00 0.00 0.00 3.27
1336 1346 3.868757 GGATACTTTCCAAAGCCCAAC 57.131 47.619 0.00 0.00 44.74 3.77
1359 1369 6.428799 TCGTTCCAAAAACAAATACCTTACG 58.571 36.000 0.00 0.00 0.00 3.18
1407 1417 2.987413 TACCTTTGATTTGCGTGCAG 57.013 45.000 0.00 0.00 0.00 4.41
1414 1424 7.452880 TCCAGACAAGATTACCTTTGATTTG 57.547 36.000 0.00 0.00 31.42 2.32
1432 1442 4.983671 AACCAACAGAAACTTTCCAGAC 57.016 40.909 0.00 0.00 0.00 3.51
1476 1486 3.930035 TCTTCCCTTATTCTCTCTCCCC 58.070 50.000 0.00 0.00 0.00 4.81
1477 1487 7.619512 TTATTCTTCCCTTATTCTCTCTCCC 57.380 40.000 0.00 0.00 0.00 4.30
1493 1503 8.389586 ACGTGAAGTTGTTTTGTTTATTCTTC 57.610 30.769 0.00 0.00 0.00 2.87
1506 1516 5.820947 AGAACTATCCAAACGTGAAGTTGTT 59.179 36.000 0.00 0.00 43.37 2.83
1510 1520 4.989168 GTCAGAACTATCCAAACGTGAAGT 59.011 41.667 0.00 0.00 0.00 3.01
1524 1534 6.879458 GCTCCTTTATTTCCAAGTCAGAACTA 59.121 38.462 0.00 0.00 33.48 2.24
1529 1539 5.248640 TCTGCTCCTTTATTTCCAAGTCAG 58.751 41.667 0.00 0.00 0.00 3.51
1541 1551 0.108138 GCCTTCGCTCTGCTCCTTTA 60.108 55.000 0.00 0.00 0.00 1.85
1564 1574 5.221441 CGTGAGATATCCCTCCAAATGTGTA 60.221 44.000 0.00 0.00 32.32 2.90
1565 1575 4.443457 CGTGAGATATCCCTCCAAATGTGT 60.443 45.833 0.00 0.00 32.32 3.72
1598 1612 4.747810 CCAACCTATGAAAATGACTTGCC 58.252 43.478 0.00 0.00 0.00 4.52
1644 1658 1.818674 CAACCTCAATGGGGTAGCAAC 59.181 52.381 4.67 0.00 41.11 4.17
1648 1662 2.242196 ACATCCAACCTCAATGGGGTAG 59.758 50.000 4.67 0.00 41.11 3.18
1654 1668 3.614092 ACTAGCACATCCAACCTCAATG 58.386 45.455 0.00 0.00 0.00 2.82
1661 1675 5.238650 ACAAACAAGTACTAGCACATCCAAC 59.761 40.000 0.00 0.00 0.00 3.77
1667 3388 5.186942 TCCAAACAAACAAGTACTAGCACA 58.813 37.500 0.00 0.00 0.00 4.57
1684 3405 5.308825 TCTCACTCCATTTTCTCTCCAAAC 58.691 41.667 0.00 0.00 0.00 2.93
1698 3419 2.634940 CACTTCCTTCCTTCTCACTCCA 59.365 50.000 0.00 0.00 0.00 3.86
1706 3427 9.462606 TTTTCTTTATATCCACTTCCTTCCTTC 57.537 33.333 0.00 0.00 0.00 3.46
1736 3457 0.247894 TGCGTCGAAACAAGCAACAC 60.248 50.000 0.00 0.00 36.60 3.32
1737 3458 0.247894 GTGCGTCGAAACAAGCAACA 60.248 50.000 0.00 0.00 41.56 3.33
1738 3459 0.247894 TGTGCGTCGAAACAAGCAAC 60.248 50.000 0.00 0.00 41.56 4.17
1751 3472 2.094390 ACACTATATCACGGTTGTGCGT 60.094 45.455 0.00 0.00 46.01 5.24
1775 3496 1.532078 TGACGTGGCTGACTGGGTA 60.532 57.895 0.00 0.00 0.00 3.69
1789 3510 0.671781 CCCAGAGGAAACTGCTGACG 60.672 60.000 0.00 0.00 44.43 4.35
1790 3511 0.398318 ACCCAGAGGAAACTGCTGAC 59.602 55.000 0.00 0.00 44.43 3.51
1816 3537 3.583806 CTGGAACTACTGACTGCAGAAG 58.416 50.000 23.35 19.07 45.17 2.85
1834 3555 5.705609 AAAACTGTGTATAACCAAGCTGG 57.294 39.130 0.00 0.00 45.02 4.85
1842 3563 8.082242 AGCATCCAAAGAAAAACTGTGTATAAC 58.918 33.333 0.00 0.00 32.23 1.89
1851 3572 8.962884 AAACAAATAGCATCCAAAGAAAAACT 57.037 26.923 0.00 0.00 0.00 2.66
1856 3578 9.034800 AGGATAAAACAAATAGCATCCAAAGAA 57.965 29.630 0.00 0.00 35.44 2.52
1864 3586 7.880160 TGTAGCAGGATAAAACAAATAGCAT 57.120 32.000 0.00 0.00 0.00 3.79
1866 3588 7.013274 TCCATGTAGCAGGATAAAACAAATAGC 59.987 37.037 0.00 0.00 0.00 2.97
1904 3626 6.881065 TCAACATGGACACCATTTTTCAAAAA 59.119 30.769 0.00 0.00 42.23 1.94
1905 3627 6.409704 TCAACATGGACACCATTTTTCAAAA 58.590 32.000 0.00 0.00 42.23 2.44
1906 3628 5.982356 TCAACATGGACACCATTTTTCAAA 58.018 33.333 0.00 0.00 42.23 2.69
1907 3629 5.604758 TCAACATGGACACCATTTTTCAA 57.395 34.783 0.00 0.00 42.23 2.69
1908 3630 5.070180 ACATCAACATGGACACCATTTTTCA 59.930 36.000 0.00 0.00 42.23 2.69
1909 3631 5.540911 ACATCAACATGGACACCATTTTTC 58.459 37.500 0.00 0.00 42.23 2.29
1910 3632 5.549742 ACATCAACATGGACACCATTTTT 57.450 34.783 0.00 0.00 42.23 1.94
1911 3633 5.185635 CCTACATCAACATGGACACCATTTT 59.814 40.000 0.00 0.00 42.23 1.82
1912 3634 4.706476 CCTACATCAACATGGACACCATTT 59.294 41.667 0.00 0.00 42.23 2.32
1913 3635 4.272489 CCTACATCAACATGGACACCATT 58.728 43.478 0.00 0.00 42.23 3.16
1914 3636 3.371917 CCCTACATCAACATGGACACCAT 60.372 47.826 0.00 0.00 46.37 3.55
1915 3637 2.026356 CCCTACATCAACATGGACACCA 60.026 50.000 0.00 0.00 38.19 4.17
1916 3638 2.026262 ACCCTACATCAACATGGACACC 60.026 50.000 0.00 0.00 33.82 4.16
1917 3639 3.009723 CACCCTACATCAACATGGACAC 58.990 50.000 0.00 0.00 33.82 3.67
1918 3640 2.026356 CCACCCTACATCAACATGGACA 60.026 50.000 0.00 0.00 33.82 4.02
1919 3641 2.238646 TCCACCCTACATCAACATGGAC 59.761 50.000 0.00 0.00 33.82 4.02
1920 3642 2.556766 TCCACCCTACATCAACATGGA 58.443 47.619 0.00 0.00 33.82 3.41
1921 3643 3.364460 TTCCACCCTACATCAACATGG 57.636 47.619 0.00 0.00 33.82 3.66
1922 3644 3.443681 GGTTTCCACCCTACATCAACATG 59.556 47.826 0.00 0.00 37.03 3.21
1923 3645 3.697166 GGTTTCCACCCTACATCAACAT 58.303 45.455 0.00 0.00 37.03 2.71
1924 3646 3.149005 GGTTTCCACCCTACATCAACA 57.851 47.619 0.00 0.00 37.03 3.33
1935 3657 1.205460 TCAGCCCTAGGGTTTCCACC 61.205 60.000 28.96 10.40 43.37 4.61
1936 3658 0.919710 ATCAGCCCTAGGGTTTCCAC 59.080 55.000 28.96 11.17 37.65 4.02
1937 3659 1.213296 GATCAGCCCTAGGGTTTCCA 58.787 55.000 28.96 9.79 37.65 3.53
1938 3660 1.512735 AGATCAGCCCTAGGGTTTCC 58.487 55.000 28.96 12.33 37.65 3.13
1939 3661 3.054361 TGAAAGATCAGCCCTAGGGTTTC 60.054 47.826 28.96 25.57 37.65 2.78
1940 3662 2.919602 TGAAAGATCAGCCCTAGGGTTT 59.080 45.455 28.96 19.22 37.65 3.27
1941 3663 2.239907 GTGAAAGATCAGCCCTAGGGTT 59.760 50.000 28.96 21.41 35.88 4.11
1942 3664 1.840635 GTGAAAGATCAGCCCTAGGGT 59.159 52.381 28.96 13.11 35.88 4.34
1943 3665 1.202580 CGTGAAAGATCAGCCCTAGGG 60.203 57.143 24.89 24.89 35.88 3.53
1944 3666 1.757118 TCGTGAAAGATCAGCCCTAGG 59.243 52.381 0.06 0.06 35.88 3.02
1945 3667 3.526931 TTCGTGAAAGATCAGCCCTAG 57.473 47.619 0.00 0.00 35.88 3.02
1946 3668 3.973206 TTTCGTGAAAGATCAGCCCTA 57.027 42.857 0.00 0.00 35.88 3.53
1947 3669 2.859165 TTTCGTGAAAGATCAGCCCT 57.141 45.000 0.00 0.00 35.88 5.19
1948 3670 2.098117 CCATTTCGTGAAAGATCAGCCC 59.902 50.000 0.00 0.00 35.88 5.19
1949 3671 3.009723 TCCATTTCGTGAAAGATCAGCC 58.990 45.455 0.00 0.00 35.88 4.85
1950 3672 3.935203 TCTCCATTTCGTGAAAGATCAGC 59.065 43.478 0.00 0.00 35.88 4.26
1951 3673 4.569966 CCTCTCCATTTCGTGAAAGATCAG 59.430 45.833 0.00 0.00 35.88 2.90
1952 3674 4.222810 TCCTCTCCATTTCGTGAAAGATCA 59.777 41.667 0.00 0.00 33.32 2.92
1953 3675 4.759782 TCCTCTCCATTTCGTGAAAGATC 58.240 43.478 1.20 0.00 33.32 2.75
1954 3676 4.826274 TCCTCTCCATTTCGTGAAAGAT 57.174 40.909 1.20 0.00 33.32 2.40
1955 3677 4.383118 GGATCCTCTCCATTTCGTGAAAGA 60.383 45.833 3.84 0.00 44.26 2.52
1956 3678 3.873952 GGATCCTCTCCATTTCGTGAAAG 59.126 47.826 3.84 0.00 44.26 2.62
1957 3679 3.873910 GGATCCTCTCCATTTCGTGAAA 58.126 45.455 3.84 0.00 44.26 2.69
1958 3680 3.543680 GGATCCTCTCCATTTCGTGAA 57.456 47.619 3.84 0.00 44.26 3.18
1974 3696 2.163815 TCTTCGTGTTCTTCGGAGGATC 59.836 50.000 0.00 0.00 34.99 3.36
1975 3697 2.168496 TCTTCGTGTTCTTCGGAGGAT 58.832 47.619 0.00 0.00 34.99 3.24
1976 3698 1.612676 TCTTCGTGTTCTTCGGAGGA 58.387 50.000 0.00 0.00 34.99 3.71
1977 3699 2.059541 GTTCTTCGTGTTCTTCGGAGG 58.940 52.381 0.00 0.00 34.99 4.30
1978 3700 2.739292 TGTTCTTCGTGTTCTTCGGAG 58.261 47.619 0.00 0.00 35.49 4.63
1979 3701 2.875087 TGTTCTTCGTGTTCTTCGGA 57.125 45.000 0.00 0.00 0.00 4.55
1980 3702 3.057019 TCATGTTCTTCGTGTTCTTCGG 58.943 45.455 0.00 0.00 34.87 4.30
1981 3703 3.121944 CCTCATGTTCTTCGTGTTCTTCG 59.878 47.826 0.00 0.00 34.87 3.79
1982 3704 3.433615 CCCTCATGTTCTTCGTGTTCTTC 59.566 47.826 0.00 0.00 34.87 2.87
1983 3705 3.403038 CCCTCATGTTCTTCGTGTTCTT 58.597 45.455 0.00 0.00 34.87 2.52
1984 3706 2.289694 CCCCTCATGTTCTTCGTGTTCT 60.290 50.000 0.00 0.00 34.87 3.01
1985 3707 2.076863 CCCCTCATGTTCTTCGTGTTC 58.923 52.381 0.00 0.00 34.87 3.18
1986 3708 1.697432 TCCCCTCATGTTCTTCGTGTT 59.303 47.619 0.00 0.00 34.87 3.32
1987 3709 1.348064 TCCCCTCATGTTCTTCGTGT 58.652 50.000 0.00 0.00 34.87 4.49
1988 3710 2.472695 TTCCCCTCATGTTCTTCGTG 57.527 50.000 0.00 0.00 34.61 4.35
1989 3711 3.146847 GTTTTCCCCTCATGTTCTTCGT 58.853 45.455 0.00 0.00 0.00 3.85
1990 3712 3.058224 GTGTTTTCCCCTCATGTTCTTCG 60.058 47.826 0.00 0.00 0.00 3.79
1991 3713 3.058224 CGTGTTTTCCCCTCATGTTCTTC 60.058 47.826 0.00 0.00 0.00 2.87
1992 3714 2.884639 CGTGTTTTCCCCTCATGTTCTT 59.115 45.455 0.00 0.00 0.00 2.52
1993 3715 2.105821 TCGTGTTTTCCCCTCATGTTCT 59.894 45.455 0.00 0.00 0.00 3.01
1994 3716 2.484264 CTCGTGTTTTCCCCTCATGTTC 59.516 50.000 0.00 0.00 0.00 3.18
1995 3717 2.105821 TCTCGTGTTTTCCCCTCATGTT 59.894 45.455 0.00 0.00 0.00 2.71
1996 3718 1.697432 TCTCGTGTTTTCCCCTCATGT 59.303 47.619 0.00 0.00 0.00 3.21
1997 3719 2.028112 TCTCTCGTGTTTTCCCCTCATG 60.028 50.000 0.00 0.00 0.00 3.07
1998 3720 2.257207 TCTCTCGTGTTTTCCCCTCAT 58.743 47.619 0.00 0.00 0.00 2.90
1999 3721 1.712056 TCTCTCGTGTTTTCCCCTCA 58.288 50.000 0.00 0.00 0.00 3.86
2000 3722 2.833631 TTCTCTCGTGTTTTCCCCTC 57.166 50.000 0.00 0.00 0.00 4.30
2001 3723 3.135895 TCTTTTCTCTCGTGTTTTCCCCT 59.864 43.478 0.00 0.00 0.00 4.79
2002 3724 3.250280 GTCTTTTCTCTCGTGTTTTCCCC 59.750 47.826 0.00 0.00 0.00 4.81
2003 3725 3.875134 TGTCTTTTCTCTCGTGTTTTCCC 59.125 43.478 0.00 0.00 0.00 3.97
2004 3726 4.571176 AGTGTCTTTTCTCTCGTGTTTTCC 59.429 41.667 0.00 0.00 0.00 3.13
2005 3727 5.291128 TGAGTGTCTTTTCTCTCGTGTTTTC 59.709 40.000 0.00 0.00 32.66 2.29
2006 3728 5.175859 TGAGTGTCTTTTCTCTCGTGTTTT 58.824 37.500 0.00 0.00 32.66 2.43
2007 3729 4.755411 TGAGTGTCTTTTCTCTCGTGTTT 58.245 39.130 0.00 0.00 32.66 2.83
2008 3730 4.386867 TGAGTGTCTTTTCTCTCGTGTT 57.613 40.909 0.00 0.00 32.66 3.32
2009 3731 4.386867 TTGAGTGTCTTTTCTCTCGTGT 57.613 40.909 0.00 0.00 32.66 4.49
2010 3732 5.463392 TGATTTGAGTGTCTTTTCTCTCGTG 59.537 40.000 0.00 0.00 32.66 4.35
2011 3733 5.601662 TGATTTGAGTGTCTTTTCTCTCGT 58.398 37.500 0.00 0.00 32.66 4.18
2012 3734 6.358762 GTTGATTTGAGTGTCTTTTCTCTCG 58.641 40.000 0.00 0.00 32.66 4.04
2013 3735 6.201044 TCGTTGATTTGAGTGTCTTTTCTCTC 59.799 38.462 0.00 0.00 0.00 3.20
2014 3736 6.049149 TCGTTGATTTGAGTGTCTTTTCTCT 58.951 36.000 0.00 0.00 0.00 3.10
2015 3737 6.201044 TCTCGTTGATTTGAGTGTCTTTTCTC 59.799 38.462 0.00 0.00 33.88 2.87
2016 3738 6.049149 TCTCGTTGATTTGAGTGTCTTTTCT 58.951 36.000 0.00 0.00 33.88 2.52
2017 3739 6.287107 TCTCGTTGATTTGAGTGTCTTTTC 57.713 37.500 0.00 0.00 33.88 2.29
2018 3740 6.093495 TGTTCTCGTTGATTTGAGTGTCTTTT 59.907 34.615 0.00 0.00 33.88 2.27
2019 3741 5.584649 TGTTCTCGTTGATTTGAGTGTCTTT 59.415 36.000 0.00 0.00 33.88 2.52
2020 3742 5.116180 TGTTCTCGTTGATTTGAGTGTCTT 58.884 37.500 0.00 0.00 33.88 3.01
2021 3743 4.693283 TGTTCTCGTTGATTTGAGTGTCT 58.307 39.130 0.00 0.00 33.88 3.41
2022 3744 5.403897 TTGTTCTCGTTGATTTGAGTGTC 57.596 39.130 0.00 0.00 33.88 3.67
2023 3745 5.527214 TGATTGTTCTCGTTGATTTGAGTGT 59.473 36.000 0.00 0.00 33.88 3.55
2024 3746 5.848036 GTGATTGTTCTCGTTGATTTGAGTG 59.152 40.000 0.00 0.00 33.88 3.51
2025 3747 5.527214 TGTGATTGTTCTCGTTGATTTGAGT 59.473 36.000 0.00 0.00 33.88 3.41
2026 3748 5.848036 GTGTGATTGTTCTCGTTGATTTGAG 59.152 40.000 0.00 0.00 0.00 3.02
2027 3749 5.295540 TGTGTGATTGTTCTCGTTGATTTGA 59.704 36.000 0.00 0.00 0.00 2.69
2028 3750 5.509771 TGTGTGATTGTTCTCGTTGATTTG 58.490 37.500 0.00 0.00 0.00 2.32
2029 3751 5.749596 TGTGTGATTGTTCTCGTTGATTT 57.250 34.783 0.00 0.00 0.00 2.17
2030 3752 5.239306 ACATGTGTGATTGTTCTCGTTGATT 59.761 36.000 0.00 0.00 0.00 2.57
2031 3753 4.756642 ACATGTGTGATTGTTCTCGTTGAT 59.243 37.500 0.00 0.00 0.00 2.57
2032 3754 4.126437 ACATGTGTGATTGTTCTCGTTGA 58.874 39.130 0.00 0.00 0.00 3.18
2033 3755 4.472691 ACATGTGTGATTGTTCTCGTTG 57.527 40.909 0.00 0.00 0.00 4.10
2047 3769 4.194640 GTTCATGGATCTAGCACATGTGT 58.805 43.478 26.01 15.36 41.91 3.72
2048 3770 4.193865 TGTTCATGGATCTAGCACATGTG 58.806 43.478 21.83 21.83 41.91 3.21
2049 3771 4.492494 TGTTCATGGATCTAGCACATGT 57.508 40.909 15.81 0.00 41.91 3.21
2050 3772 7.443272 TCTTTATGTTCATGGATCTAGCACATG 59.557 37.037 12.23 12.23 42.44 3.21
2051 3773 7.512130 TCTTTATGTTCATGGATCTAGCACAT 58.488 34.615 0.00 0.00 0.00 3.21
2052 3774 6.888105 TCTTTATGTTCATGGATCTAGCACA 58.112 36.000 0.00 0.00 0.00 4.57
2053 3775 6.989169 ACTCTTTATGTTCATGGATCTAGCAC 59.011 38.462 0.00 0.00 0.00 4.40
2054 3776 6.988580 CACTCTTTATGTTCATGGATCTAGCA 59.011 38.462 0.00 0.00 0.00 3.49
2055 3777 7.212976 TCACTCTTTATGTTCATGGATCTAGC 58.787 38.462 0.00 0.00 0.00 3.42
2058 3780 8.708378 TGTATCACTCTTTATGTTCATGGATCT 58.292 33.333 0.00 0.00 0.00 2.75
2059 3781 8.893219 TGTATCACTCTTTATGTTCATGGATC 57.107 34.615 0.00 0.00 0.00 3.36
2060 3782 9.334947 CTTGTATCACTCTTTATGTTCATGGAT 57.665 33.333 0.00 0.00 0.00 3.41
2061 3783 8.539544 TCTTGTATCACTCTTTATGTTCATGGA 58.460 33.333 0.00 0.00 0.00 3.41
2062 3784 8.722480 TCTTGTATCACTCTTTATGTTCATGG 57.278 34.615 0.00 0.00 0.00 3.66
2072 3794 9.778741 TTGTGTTTAGATCTTGTATCACTCTTT 57.221 29.630 0.00 0.00 0.00 2.52
2073 3795 9.209175 GTTGTGTTTAGATCTTGTATCACTCTT 57.791 33.333 0.00 0.00 0.00 2.85
2074 3796 8.367911 TGTTGTGTTTAGATCTTGTATCACTCT 58.632 33.333 0.00 0.00 0.00 3.24
2075 3797 8.534333 TGTTGTGTTTAGATCTTGTATCACTC 57.466 34.615 0.00 3.73 0.00 3.51
2076 3798 8.902540 TTGTTGTGTTTAGATCTTGTATCACT 57.097 30.769 0.00 0.00 0.00 3.41
2077 3799 9.599322 CTTTGTTGTGTTTAGATCTTGTATCAC 57.401 33.333 0.00 5.08 0.00 3.06
2078 3800 8.783093 CCTTTGTTGTGTTTAGATCTTGTATCA 58.217 33.333 0.00 0.00 0.00 2.15
2079 3801 8.999431 TCCTTTGTTGTGTTTAGATCTTGTATC 58.001 33.333 0.00 0.00 0.00 2.24
2080 3802 8.784043 GTCCTTTGTTGTGTTTAGATCTTGTAT 58.216 33.333 0.00 0.00 0.00 2.29
2081 3803 7.042321 CGTCCTTTGTTGTGTTTAGATCTTGTA 60.042 37.037 0.00 0.00 0.00 2.41
2082 3804 6.238374 CGTCCTTTGTTGTGTTTAGATCTTGT 60.238 38.462 0.00 0.00 0.00 3.16
2083 3805 6.018262 TCGTCCTTTGTTGTGTTTAGATCTTG 60.018 38.462 0.00 0.00 0.00 3.02
2084 3806 6.053005 TCGTCCTTTGTTGTGTTTAGATCTT 58.947 36.000 0.00 0.00 0.00 2.40
2085 3807 5.607477 TCGTCCTTTGTTGTGTTTAGATCT 58.393 37.500 0.00 0.00 0.00 2.75
2086 3808 5.917541 TCGTCCTTTGTTGTGTTTAGATC 57.082 39.130 0.00 0.00 0.00 2.75
2087 3809 6.932400 TGTATCGTCCTTTGTTGTGTTTAGAT 59.068 34.615 0.00 0.00 0.00 1.98
2088 3810 6.282167 TGTATCGTCCTTTGTTGTGTTTAGA 58.718 36.000 0.00 0.00 0.00 2.10
2089 3811 6.533819 TGTATCGTCCTTTGTTGTGTTTAG 57.466 37.500 0.00 0.00 0.00 1.85
2090 3812 6.922247 TTGTATCGTCCTTTGTTGTGTTTA 57.078 33.333 0.00 0.00 0.00 2.01
2091 3813 5.821516 TTGTATCGTCCTTTGTTGTGTTT 57.178 34.783 0.00 0.00 0.00 2.83
2092 3814 5.821516 TTTGTATCGTCCTTTGTTGTGTT 57.178 34.783 0.00 0.00 0.00 3.32
2093 3815 5.220970 CCTTTTGTATCGTCCTTTGTTGTGT 60.221 40.000 0.00 0.00 0.00 3.72
2094 3816 5.212194 CCTTTTGTATCGTCCTTTGTTGTG 58.788 41.667 0.00 0.00 0.00 3.33
2095 3817 4.261447 GCCTTTTGTATCGTCCTTTGTTGT 60.261 41.667 0.00 0.00 0.00 3.32
2096 3818 4.226761 GCCTTTTGTATCGTCCTTTGTTG 58.773 43.478 0.00 0.00 0.00 3.33
2097 3819 3.058501 CGCCTTTTGTATCGTCCTTTGTT 60.059 43.478 0.00 0.00 0.00 2.83
2098 3820 2.482721 CGCCTTTTGTATCGTCCTTTGT 59.517 45.455 0.00 0.00 0.00 2.83
2099 3821 2.159572 CCGCCTTTTGTATCGTCCTTTG 60.160 50.000 0.00 0.00 0.00 2.77
2100 3822 2.081462 CCGCCTTTTGTATCGTCCTTT 58.919 47.619 0.00 0.00 0.00 3.11
2101 3823 1.002773 ACCGCCTTTTGTATCGTCCTT 59.997 47.619 0.00 0.00 0.00 3.36
2102 3824 0.611714 ACCGCCTTTTGTATCGTCCT 59.388 50.000 0.00 0.00 0.00 3.85
2103 3825 2.199236 CTACCGCCTTTTGTATCGTCC 58.801 52.381 0.00 0.00 0.00 4.79
2104 3826 2.884827 ACTACCGCCTTTTGTATCGTC 58.115 47.619 0.00 0.00 0.00 4.20
2105 3827 3.056322 AGAACTACCGCCTTTTGTATCGT 60.056 43.478 0.00 0.00 0.00 3.73
2106 3828 3.518590 AGAACTACCGCCTTTTGTATCG 58.481 45.455 0.00 0.00 0.00 2.92
2107 3829 5.176592 AGAAGAACTACCGCCTTTTGTATC 58.823 41.667 0.00 0.00 0.00 2.24
2108 3830 5.161943 AGAAGAACTACCGCCTTTTGTAT 57.838 39.130 0.00 0.00 0.00 2.29
2109 3831 4.562143 GGAGAAGAACTACCGCCTTTTGTA 60.562 45.833 0.00 0.00 0.00 2.41
2110 3832 3.400255 GAGAAGAACTACCGCCTTTTGT 58.600 45.455 0.00 0.00 0.00 2.83
2111 3833 2.742589 GGAGAAGAACTACCGCCTTTTG 59.257 50.000 0.00 0.00 0.00 2.44
2112 3834 2.370849 TGGAGAAGAACTACCGCCTTTT 59.629 45.455 0.00 0.00 0.00 2.27
2113 3835 1.975680 TGGAGAAGAACTACCGCCTTT 59.024 47.619 0.00 0.00 0.00 3.11
2114 3836 1.640917 TGGAGAAGAACTACCGCCTT 58.359 50.000 0.00 0.00 0.00 4.35
2115 3837 1.482593 CATGGAGAAGAACTACCGCCT 59.517 52.381 0.00 0.00 0.00 5.52
2116 3838 1.480954 TCATGGAGAAGAACTACCGCC 59.519 52.381 0.00 0.00 0.00 6.13
2117 3839 2.482142 CCTCATGGAGAAGAACTACCGC 60.482 54.545 0.00 0.00 34.57 5.68
2118 3840 3.024547 TCCTCATGGAGAAGAACTACCG 58.975 50.000 0.00 0.00 37.46 4.02
2130 3852 1.623557 CCCTCAAGACCTCCTCATGGA 60.624 57.143 0.00 0.00 40.69 3.41
2131 3853 0.835941 CCCTCAAGACCTCCTCATGG 59.164 60.000 0.00 0.00 0.00 3.66
2132 3854 0.835941 CCCCTCAAGACCTCCTCATG 59.164 60.000 0.00 0.00 0.00 3.07
2133 3855 0.419459 ACCCCTCAAGACCTCCTCAT 59.581 55.000 0.00 0.00 0.00 2.90
2134 3856 0.252284 GACCCCTCAAGACCTCCTCA 60.252 60.000 0.00 0.00 0.00 3.86
2135 3857 0.041982 AGACCCCTCAAGACCTCCTC 59.958 60.000 0.00 0.00 0.00 3.71
2136 3858 0.494095 AAGACCCCTCAAGACCTCCT 59.506 55.000 0.00 0.00 0.00 3.69
2137 3859 0.906066 GAAGACCCCTCAAGACCTCC 59.094 60.000 0.00 0.00 0.00 4.30
2138 3860 0.906066 GGAAGACCCCTCAAGACCTC 59.094 60.000 0.00 0.00 0.00 3.85
2139 3861 0.494095 AGGAAGACCCCTCAAGACCT 59.506 55.000 0.00 0.00 36.73 3.85
2140 3862 0.615850 CAGGAAGACCCCTCAAGACC 59.384 60.000 0.00 0.00 33.38 3.85
2141 3863 1.002544 CACAGGAAGACCCCTCAAGAC 59.997 57.143 0.00 0.00 33.38 3.01
2142 3864 1.132849 TCACAGGAAGACCCCTCAAGA 60.133 52.381 0.00 0.00 33.38 3.02
2143 3865 1.277557 CTCACAGGAAGACCCCTCAAG 59.722 57.143 0.00 0.00 33.38 3.02
2144 3866 1.352083 CTCACAGGAAGACCCCTCAA 58.648 55.000 0.00 0.00 33.38 3.02
2145 3867 0.545309 CCTCACAGGAAGACCCCTCA 60.545 60.000 0.00 0.00 37.67 3.86
2146 3868 1.268283 CCCTCACAGGAAGACCCCTC 61.268 65.000 0.00 0.00 37.67 4.30
2147 3869 1.229658 CCCTCACAGGAAGACCCCT 60.230 63.158 0.00 0.00 37.67 4.79
2148 3870 2.301738 CCCCTCACAGGAAGACCCC 61.302 68.421 0.00 0.00 37.67 4.95
2149 3871 1.539124 ACCCCTCACAGGAAGACCC 60.539 63.158 0.00 0.00 37.67 4.46
2150 3872 0.545548 AGACCCCTCACAGGAAGACC 60.546 60.000 0.00 0.00 37.67 3.85
2151 3873 1.002544 CAAGACCCCTCACAGGAAGAC 59.997 57.143 0.00 0.00 37.67 3.01
2152 3874 1.132849 TCAAGACCCCTCACAGGAAGA 60.133 52.381 0.00 0.00 37.67 2.87
2153 3875 1.352083 TCAAGACCCCTCACAGGAAG 58.648 55.000 0.00 0.00 37.67 3.46
2154 3876 1.814429 TTCAAGACCCCTCACAGGAA 58.186 50.000 0.00 0.00 37.67 3.36
2155 3877 1.909302 GATTCAAGACCCCTCACAGGA 59.091 52.381 0.00 0.00 37.67 3.86
2156 3878 1.065126 GGATTCAAGACCCCTCACAGG 60.065 57.143 0.00 0.00 34.30 4.00
2157 3879 1.630369 TGGATTCAAGACCCCTCACAG 59.370 52.381 0.00 0.00 0.00 3.66
2158 3880 1.351017 GTGGATTCAAGACCCCTCACA 59.649 52.381 0.00 0.00 0.00 3.58
2159 3881 1.630878 AGTGGATTCAAGACCCCTCAC 59.369 52.381 0.00 0.00 0.00 3.51
2160 3882 2.040278 CAAGTGGATTCAAGACCCCTCA 59.960 50.000 0.00 0.00 0.00 3.86
2161 3883 2.619074 CCAAGTGGATTCAAGACCCCTC 60.619 54.545 0.00 0.00 37.39 4.30
2162 3884 1.355720 CCAAGTGGATTCAAGACCCCT 59.644 52.381 0.00 0.00 37.39 4.79
2163 3885 1.616994 CCCAAGTGGATTCAAGACCCC 60.617 57.143 0.00 0.00 37.39 4.95
2164 3886 1.616994 CCCCAAGTGGATTCAAGACCC 60.617 57.143 0.00 0.00 37.39 4.46
2165 3887 1.616994 CCCCCAAGTGGATTCAAGACC 60.617 57.143 0.00 0.00 37.39 3.85
2166 3888 1.354368 TCCCCCAAGTGGATTCAAGAC 59.646 52.381 0.00 0.00 37.39 3.01
2167 3889 1.753903 TCCCCCAAGTGGATTCAAGA 58.246 50.000 0.00 0.00 37.39 3.02
2168 3890 2.243221 AGATCCCCCAAGTGGATTCAAG 59.757 50.000 0.00 0.00 42.69 3.02
2169 3891 2.287584 AGATCCCCCAAGTGGATTCAA 58.712 47.619 0.00 0.00 42.69 2.69
2170 3892 1.985622 AGATCCCCCAAGTGGATTCA 58.014 50.000 0.00 0.00 42.69 2.57
2171 3893 2.511637 AGAAGATCCCCCAAGTGGATTC 59.488 50.000 0.00 0.00 42.69 2.52
2172 3894 2.511637 GAGAAGATCCCCCAAGTGGATT 59.488 50.000 0.00 0.00 42.69 3.01
2173 3895 2.131023 GAGAAGATCCCCCAAGTGGAT 58.869 52.381 0.00 0.00 45.32 3.41
2174 3896 1.584724 GAGAAGATCCCCCAAGTGGA 58.415 55.000 0.00 0.00 37.39 4.02
2175 3897 0.548510 GGAGAAGATCCCCCAAGTGG 59.451 60.000 0.00 0.00 43.01 4.00
2176 3898 0.179000 CGGAGAAGATCCCCCAAGTG 59.821 60.000 0.00 0.00 46.50 3.16
2177 3899 0.252742 ACGGAGAAGATCCCCCAAGT 60.253 55.000 0.00 0.00 46.50 3.16
2178 3900 1.689273 CTACGGAGAAGATCCCCCAAG 59.311 57.143 0.00 0.00 46.50 3.61
2179 3901 1.289830 TCTACGGAGAAGATCCCCCAA 59.710 52.381 0.00 0.00 46.50 4.12
2180 3902 0.931468 TCTACGGAGAAGATCCCCCA 59.069 55.000 0.00 0.00 46.50 4.96
2181 3903 1.623163 CTCTACGGAGAAGATCCCCC 58.377 60.000 0.00 0.00 46.50 5.40
2182 3904 1.133419 ACCTCTACGGAGAAGATCCCC 60.133 57.143 0.00 0.00 46.50 4.81
2183 3905 2.232399 GACCTCTACGGAGAAGATCCC 58.768 57.143 0.00 0.00 46.50 3.85
2184 3906 1.874872 CGACCTCTACGGAGAAGATCC 59.125 57.143 0.00 0.00 45.64 3.36
2185 3907 2.288458 CACGACCTCTACGGAGAAGATC 59.712 54.545 0.00 0.00 41.86 2.75
2186 3908 2.093075 TCACGACCTCTACGGAGAAGAT 60.093 50.000 0.00 0.00 41.86 2.40
2187 3909 1.277273 TCACGACCTCTACGGAGAAGA 59.723 52.381 0.00 0.00 41.86 2.87
2188 3910 1.735386 TCACGACCTCTACGGAGAAG 58.265 55.000 0.00 0.00 41.86 2.85
2189 3911 2.189594 TTCACGACCTCTACGGAGAA 57.810 50.000 0.00 0.00 41.86 2.87
2190 3912 2.414994 ATTCACGACCTCTACGGAGA 57.585 50.000 0.00 0.00 41.86 3.71
2191 3913 2.223525 GGAATTCACGACCTCTACGGAG 60.224 54.545 7.93 0.00 39.18 4.63
2192 3914 1.747355 GGAATTCACGACCTCTACGGA 59.253 52.381 7.93 0.00 36.31 4.69
2193 3915 1.533338 CGGAATTCACGACCTCTACGG 60.533 57.143 7.93 0.00 39.35 4.02
2194 3916 1.399440 TCGGAATTCACGACCTCTACG 59.601 52.381 7.93 0.00 35.12 3.51
2195 3917 3.372954 CATCGGAATTCACGACCTCTAC 58.627 50.000 17.47 0.00 43.78 2.59
2196 3918 2.361119 CCATCGGAATTCACGACCTCTA 59.639 50.000 17.47 0.20 43.78 2.43
2197 3919 1.137086 CCATCGGAATTCACGACCTCT 59.863 52.381 17.47 3.68 43.78 3.69
2198 3920 1.136305 TCCATCGGAATTCACGACCTC 59.864 52.381 17.47 0.00 43.78 3.85
2199 3921 1.137086 CTCCATCGGAATTCACGACCT 59.863 52.381 17.47 4.54 43.78 3.85
2200 3922 1.136305 TCTCCATCGGAATTCACGACC 59.864 52.381 17.47 0.00 43.78 4.79
2201 3923 2.579207 TCTCCATCGGAATTCACGAC 57.421 50.000 17.47 0.00 43.78 4.34
2202 3924 2.159099 CCTTCTCCATCGGAATTCACGA 60.159 50.000 17.44 17.44 45.19 4.35
2203 3925 2.205074 CCTTCTCCATCGGAATTCACG 58.795 52.381 7.93 8.73 0.00 4.35
2204 3926 3.268023 ACCTTCTCCATCGGAATTCAC 57.732 47.619 7.93 0.00 0.00 3.18
2205 3927 4.262036 CGATACCTTCTCCATCGGAATTCA 60.262 45.833 7.93 0.00 38.27 2.57
2206 3928 4.022242 TCGATACCTTCTCCATCGGAATTC 60.022 45.833 0.00 0.00 41.38 2.17
2207 3929 3.895656 TCGATACCTTCTCCATCGGAATT 59.104 43.478 3.67 0.00 41.38 2.17
2208 3930 3.497332 TCGATACCTTCTCCATCGGAAT 58.503 45.455 3.67 0.00 41.38 3.01
2209 3931 2.885266 CTCGATACCTTCTCCATCGGAA 59.115 50.000 3.67 0.00 41.38 4.30
2210 3932 2.158652 ACTCGATACCTTCTCCATCGGA 60.159 50.000 3.67 0.00 41.38 4.55
2211 3933 2.030717 CACTCGATACCTTCTCCATCGG 60.031 54.545 3.67 0.00 41.38 4.18
2212 3934 2.030717 CCACTCGATACCTTCTCCATCG 60.031 54.545 0.00 0.00 42.18 3.84
2213 3935 3.223435 TCCACTCGATACCTTCTCCATC 58.777 50.000 0.00 0.00 0.00 3.51
2214 3936 3.314307 TCCACTCGATACCTTCTCCAT 57.686 47.619 0.00 0.00 0.00 3.41
2215 3937 2.820728 TCCACTCGATACCTTCTCCA 57.179 50.000 0.00 0.00 0.00 3.86
2216 3938 3.223435 TCATCCACTCGATACCTTCTCC 58.777 50.000 0.00 0.00 0.00 3.71
2217 3939 3.254657 CCTCATCCACTCGATACCTTCTC 59.745 52.174 0.00 0.00 0.00 2.87
2218 3940 3.117474 TCCTCATCCACTCGATACCTTCT 60.117 47.826 0.00 0.00 0.00 2.85
2219 3941 3.223435 TCCTCATCCACTCGATACCTTC 58.777 50.000 0.00 0.00 0.00 3.46
2220 3942 3.314307 TCCTCATCCACTCGATACCTT 57.686 47.619 0.00 0.00 0.00 3.50
2221 3943 3.314307 TTCCTCATCCACTCGATACCT 57.686 47.619 0.00 0.00 0.00 3.08
2222 3944 3.800604 GCTTTCCTCATCCACTCGATACC 60.801 52.174 0.00 0.00 0.00 2.73
2223 3945 3.068873 AGCTTTCCTCATCCACTCGATAC 59.931 47.826 0.00 0.00 0.00 2.24
2224 3946 3.300388 AGCTTTCCTCATCCACTCGATA 58.700 45.455 0.00 0.00 0.00 2.92
2225 3947 2.102252 GAGCTTTCCTCATCCACTCGAT 59.898 50.000 0.00 0.00 40.45 3.59
2226 3948 1.478510 GAGCTTTCCTCATCCACTCGA 59.521 52.381 0.00 0.00 40.45 4.04
2227 3949 1.480137 AGAGCTTTCCTCATCCACTCG 59.520 52.381 0.00 0.00 43.31 4.18
2228 3950 4.588528 AGATAGAGCTTTCCTCATCCACTC 59.411 45.833 0.00 0.00 43.31 3.51
2229 3951 4.555689 AGATAGAGCTTTCCTCATCCACT 58.444 43.478 0.00 0.00 43.31 4.00
2230 3952 4.588528 AGAGATAGAGCTTTCCTCATCCAC 59.411 45.833 8.59 0.00 43.31 4.02
2231 3953 4.813809 AGAGATAGAGCTTTCCTCATCCA 58.186 43.478 8.59 0.00 43.31 3.41
2232 3954 4.832266 TGAGAGATAGAGCTTTCCTCATCC 59.168 45.833 8.59 0.86 43.31 3.51
2233 3955 6.403866 TTGAGAGATAGAGCTTTCCTCATC 57.596 41.667 8.59 5.09 43.31 2.92
2234 3956 6.805016 TTTGAGAGATAGAGCTTTCCTCAT 57.195 37.500 8.59 0.00 43.31 2.90
2235 3957 6.382282 TCATTTGAGAGATAGAGCTTTCCTCA 59.618 38.462 8.59 8.38 43.31 3.86
2236 3958 6.815089 TCATTTGAGAGATAGAGCTTTCCTC 58.185 40.000 0.00 0.00 41.07 3.71
2237 3959 6.686126 GCTCATTTGAGAGATAGAGCTTTCCT 60.686 42.308 11.70 0.00 44.74 3.36
2238 3960 5.466393 GCTCATTTGAGAGATAGAGCTTTCC 59.534 44.000 11.70 0.00 44.74 3.13
2239 3961 6.529463 GCTCATTTGAGAGATAGAGCTTTC 57.471 41.667 11.70 0.00 44.74 2.62
2243 3965 6.813152 GGATTAGCTCATTTGAGAGATAGAGC 59.187 42.308 11.70 0.00 46.47 4.09
2244 3966 8.125978 AGGATTAGCTCATTTGAGAGATAGAG 57.874 38.462 11.70 0.00 44.74 2.43
2245 3967 8.489676 AAGGATTAGCTCATTTGAGAGATAGA 57.510 34.615 11.70 0.00 44.74 1.98


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.