Multiple sequence alignment - TraesCS4D01G159800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G159800 chr4D 100.000 8789 0 0 1 8789 231204704 231213492 0.000000e+00 16231.0
1 TraesCS4D01G159800 chr4D 91.348 1988 112 16 3172 5126 297783077 297781117 0.000000e+00 2663.0
2 TraesCS4D01G159800 chr4D 92.824 864 57 4 7 869 280760286 280759427 0.000000e+00 1247.0
3 TraesCS4D01G159800 chr4D 92.529 870 60 4 1 869 84781435 84782300 0.000000e+00 1242.0
4 TraesCS4D01G159800 chr4D 100.000 299 0 0 9250 9548 231213953 231214251 3.900000e-153 553.0
5 TraesCS4D01G159800 chr4D 91.860 86 7 0 9345 9430 502732845 502732760 4.680000e-23 121.0
6 TraesCS4D01G159800 chr4D 89.855 69 6 1 9361 9428 67467714 67467782 4.750000e-13 87.9
7 TraesCS4D01G159800 chr4A 92.682 2692 119 25 5122 7777 259752434 259755083 0.000000e+00 3808.0
8 TraesCS4D01G159800 chr4A 95.312 2005 61 11 947 2920 259750436 259752438 0.000000e+00 3151.0
9 TraesCS4D01G159800 chr4A 91.477 1009 39 18 7799 8789 259755069 259756048 0.000000e+00 1343.0
10 TraesCS4D01G159800 chr4A 92.618 867 59 4 1 866 519580744 519579882 0.000000e+00 1242.0
11 TraesCS4D01G159800 chr7D 91.965 2265 126 17 2917 5130 197921874 197924133 0.000000e+00 3123.0
12 TraesCS4D01G159800 chr7D 78.409 352 44 19 4789 5121 621111498 621111836 5.850000e-47 200.0
13 TraesCS4D01G159800 chr7D 82.036 167 19 9 9266 9428 463954427 463954268 2.160000e-26 132.0
14 TraesCS4D01G159800 chr7D 91.667 84 7 0 9345 9428 469201156 469201073 6.060000e-22 117.0
15 TraesCS4D01G159800 chr2D 91.715 2233 131 16 2920 5121 239984066 239981857 0.000000e+00 3049.0
16 TraesCS4D01G159800 chr5D 91.415 2248 142 17 2921 5121 58263041 58265284 0.000000e+00 3035.0
17 TraesCS4D01G159800 chr5D 90.821 2266 137 18 2919 5121 256746277 256744020 0.000000e+00 2966.0
18 TraesCS4D01G159800 chr5D 89.275 1641 126 21 2924 4522 551356610 551354978 0.000000e+00 2010.0
19 TraesCS4D01G159800 chr5D 92.832 865 56 5 7 869 112054663 112053803 0.000000e+00 1249.0
20 TraesCS4D01G159800 chr5D 91.579 95 8 0 9334 9428 19721374 19721468 2.160000e-26 132.0
21 TraesCS4D01G159800 chr5D 91.667 84 7 0 9345 9428 38281263 38281346 6.060000e-22 117.0
22 TraesCS4D01G159800 chr5D 87.209 86 9 2 9344 9428 502076893 502076809 7.890000e-16 97.1
23 TraesCS4D01G159800 chr6D 91.427 2228 150 13 2921 5121 126836090 126838303 0.000000e+00 3018.0
24 TraesCS4D01G159800 chr6D 91.701 1928 111 15 2918 4799 302637498 302639422 0.000000e+00 2628.0
25 TraesCS4D01G159800 chr6D 93.988 865 48 3 1 864 22241506 22240645 0.000000e+00 1306.0
26 TraesCS4D01G159800 chrUn 91.322 2247 127 14 2917 5126 268922049 268924264 0.000000e+00 3007.0
27 TraesCS4D01G159800 chr3D 90.445 2271 145 27 2917 5121 248807967 248810231 0.000000e+00 2926.0
28 TraesCS4D01G159800 chr3D 91.689 1119 61 9 2917 4011 519690805 519691915 0.000000e+00 1522.0
29 TraesCS4D01G159800 chr3D 93.403 864 52 4 1 863 294348680 294349539 0.000000e+00 1275.0
30 TraesCS4D01G159800 chr3D 92.546 872 56 5 1 866 56356364 56357232 0.000000e+00 1242.0
31 TraesCS4D01G159800 chr3D 92.618 867 59 4 1 866 119730607 119731469 0.000000e+00 1242.0
32 TraesCS4D01G159800 chr3D 78.939 622 73 34 6731 7295 580152471 580153091 4.210000e-98 370.0
33 TraesCS4D01G159800 chr3D 88.298 94 11 0 9335 9428 321717377 321717284 7.840000e-21 113.0
34 TraesCS4D01G159800 chr3B 89.730 2259 143 26 2932 5122 335099141 335096904 0.000000e+00 2804.0
35 TraesCS4D01G159800 chr3B 100.000 28 0 0 9450 9477 727406949 727406976 1.700000e-02 52.8
36 TraesCS4D01G159800 chr6B 87.589 2248 218 27 2920 5118 389236985 389239220 0.000000e+00 2549.0
37 TraesCS4D01G159800 chr6B 92.632 95 6 1 9334 9428 314557088 314556995 1.670000e-27 135.0
38 TraesCS4D01G159800 chr6B 81.481 162 26 4 9272 9430 122992690 122992850 7.780000e-26 130.0
39 TraesCS4D01G159800 chr4B 96.036 1564 33 7 5122 6661 323788217 323789775 0.000000e+00 2518.0
40 TraesCS4D01G159800 chr4B 96.955 1412 24 6 1524 2920 323786814 323788221 0.000000e+00 2351.0
41 TraesCS4D01G159800 chr4B 97.386 918 23 1 7512 8429 323791046 323791962 0.000000e+00 1561.0
42 TraesCS4D01G159800 chr4B 95.607 865 24 4 6653 7509 323790101 323790959 0.000000e+00 1375.0
43 TraesCS4D01G159800 chr4B 97.430 428 7 2 920 1346 323784581 323785005 0.000000e+00 726.0
44 TraesCS4D01G159800 chr4B 91.117 349 14 3 8457 8789 323791962 323792309 3.140000e-124 457.0
45 TraesCS4D01G159800 chr4B 93.750 144 7 1 1387 1530 323785005 323785146 2.090000e-51 215.0
46 TraesCS4D01G159800 chr1D 91.606 1775 108 12 2918 4654 212521415 212523186 0.000000e+00 2414.0
47 TraesCS4D01G159800 chr1D 89.412 85 8 1 9344 9428 274259311 274259228 1.310000e-18 106.0
48 TraesCS4D01G159800 chr7B 88.407 1820 171 17 3084 4874 350972538 350970730 0.000000e+00 2156.0
49 TraesCS4D01G159800 chr7B 92.632 95 6 1 9334 9428 409710465 409710372 1.670000e-27 135.0
50 TraesCS4D01G159800 chr6A 90.974 1407 94 15 2921 4303 466689997 466691394 0.000000e+00 1864.0
51 TraesCS4D01G159800 chr6A 91.139 79 7 0 9345 9423 223406626 223406704 3.650000e-19 108.0
52 TraesCS4D01G159800 chr6A 85.567 97 14 0 9334 9430 66298650 66298746 1.700000e-17 102.0
53 TraesCS4D01G159800 chr3A 88.252 1447 123 19 3610 5034 341637071 341635650 0.000000e+00 1687.0
54 TraesCS4D01G159800 chr3A 89.762 1221 86 10 3552 4733 423961907 423963127 0.000000e+00 1526.0
55 TraesCS4D01G159800 chr3A 93.287 864 50 5 8 869 453818158 453817301 0.000000e+00 1267.0
56 TraesCS4D01G159800 chr3A 85.333 600 73 13 6238 6827 715407118 715407712 2.950000e-169 606.0
57 TraesCS4D01G159800 chr1B 100.000 91 0 0 5021 5111 313099420 313099510 1.650000e-37 169.0
58 TraesCS4D01G159800 chr1B 94.382 89 5 0 9341 9429 41696937 41696849 4.650000e-28 137.0
59 TraesCS4D01G159800 chr2B 91.753 97 7 1 9333 9428 470393404 470393500 6.020000e-27 134.0
60 TraesCS4D01G159800 chr2B 90.526 95 9 0 9334 9428 545174023 545174117 1.010000e-24 126.0
61 TraesCS4D01G159800 chr1A 92.771 83 6 0 9344 9426 254377916 254377998 4.680000e-23 121.0
62 TraesCS4D01G159800 chr1A 91.026 78 5 2 9344 9420 252839055 252838979 4.720000e-18 104.0
63 TraesCS4D01G159800 chr5B 90.588 85 8 0 9344 9428 626014214 626014130 7.840000e-21 113.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G159800 chr4D 231204704 231214251 9547 False 8392.000000 16231 100.000000 1 9548 2 chr4D.!!$F3 9547
1 TraesCS4D01G159800 chr4D 297781117 297783077 1960 True 2663.000000 2663 91.348000 3172 5126 1 chr4D.!!$R2 1954
2 TraesCS4D01G159800 chr4D 280759427 280760286 859 True 1247.000000 1247 92.824000 7 869 1 chr4D.!!$R1 862
3 TraesCS4D01G159800 chr4D 84781435 84782300 865 False 1242.000000 1242 92.529000 1 869 1 chr4D.!!$F2 868
4 TraesCS4D01G159800 chr4A 259750436 259756048 5612 False 2767.333333 3808 93.157000 947 8789 3 chr4A.!!$F1 7842
5 TraesCS4D01G159800 chr4A 519579882 519580744 862 True 1242.000000 1242 92.618000 1 866 1 chr4A.!!$R1 865
6 TraesCS4D01G159800 chr7D 197921874 197924133 2259 False 3123.000000 3123 91.965000 2917 5130 1 chr7D.!!$F1 2213
7 TraesCS4D01G159800 chr2D 239981857 239984066 2209 True 3049.000000 3049 91.715000 2920 5121 1 chr2D.!!$R1 2201
8 TraesCS4D01G159800 chr5D 58263041 58265284 2243 False 3035.000000 3035 91.415000 2921 5121 1 chr5D.!!$F3 2200
9 TraesCS4D01G159800 chr5D 256744020 256746277 2257 True 2966.000000 2966 90.821000 2919 5121 1 chr5D.!!$R2 2202
10 TraesCS4D01G159800 chr5D 551354978 551356610 1632 True 2010.000000 2010 89.275000 2924 4522 1 chr5D.!!$R4 1598
11 TraesCS4D01G159800 chr5D 112053803 112054663 860 True 1249.000000 1249 92.832000 7 869 1 chr5D.!!$R1 862
12 TraesCS4D01G159800 chr6D 126836090 126838303 2213 False 3018.000000 3018 91.427000 2921 5121 1 chr6D.!!$F1 2200
13 TraesCS4D01G159800 chr6D 302637498 302639422 1924 False 2628.000000 2628 91.701000 2918 4799 1 chr6D.!!$F2 1881
14 TraesCS4D01G159800 chr6D 22240645 22241506 861 True 1306.000000 1306 93.988000 1 864 1 chr6D.!!$R1 863
15 TraesCS4D01G159800 chrUn 268922049 268924264 2215 False 3007.000000 3007 91.322000 2917 5126 1 chrUn.!!$F1 2209
16 TraesCS4D01G159800 chr3D 248807967 248810231 2264 False 2926.000000 2926 90.445000 2917 5121 1 chr3D.!!$F3 2204
17 TraesCS4D01G159800 chr3D 519690805 519691915 1110 False 1522.000000 1522 91.689000 2917 4011 1 chr3D.!!$F5 1094
18 TraesCS4D01G159800 chr3D 294348680 294349539 859 False 1275.000000 1275 93.403000 1 863 1 chr3D.!!$F4 862
19 TraesCS4D01G159800 chr3D 56356364 56357232 868 False 1242.000000 1242 92.546000 1 866 1 chr3D.!!$F1 865
20 TraesCS4D01G159800 chr3D 119730607 119731469 862 False 1242.000000 1242 92.618000 1 866 1 chr3D.!!$F2 865
21 TraesCS4D01G159800 chr3D 580152471 580153091 620 False 370.000000 370 78.939000 6731 7295 1 chr3D.!!$F6 564
22 TraesCS4D01G159800 chr3B 335096904 335099141 2237 True 2804.000000 2804 89.730000 2932 5122 1 chr3B.!!$R1 2190
23 TraesCS4D01G159800 chr6B 389236985 389239220 2235 False 2549.000000 2549 87.589000 2920 5118 1 chr6B.!!$F2 2198
24 TraesCS4D01G159800 chr4B 323784581 323792309 7728 False 1314.714286 2518 95.468714 920 8789 7 chr4B.!!$F1 7869
25 TraesCS4D01G159800 chr1D 212521415 212523186 1771 False 2414.000000 2414 91.606000 2918 4654 1 chr1D.!!$F1 1736
26 TraesCS4D01G159800 chr7B 350970730 350972538 1808 True 2156.000000 2156 88.407000 3084 4874 1 chr7B.!!$R1 1790
27 TraesCS4D01G159800 chr6A 466689997 466691394 1397 False 1864.000000 1864 90.974000 2921 4303 1 chr6A.!!$F3 1382
28 TraesCS4D01G159800 chr3A 341635650 341637071 1421 True 1687.000000 1687 88.252000 3610 5034 1 chr3A.!!$R1 1424
29 TraesCS4D01G159800 chr3A 423961907 423963127 1220 False 1526.000000 1526 89.762000 3552 4733 1 chr3A.!!$F1 1181
30 TraesCS4D01G159800 chr3A 453817301 453818158 857 True 1267.000000 1267 93.287000 8 869 1 chr3A.!!$R2 861
31 TraesCS4D01G159800 chr3A 715407118 715407712 594 False 606.000000 606 85.333000 6238 6827 1 chr3A.!!$F2 589

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
702 704 0.245266 AATTAAGTTTTGCGGGCCGG 59.755 50.000 29.48 9.71 0.00 6.13 F
916 918 0.250770 AGAAGAAAGCCCAACGACCC 60.251 55.000 0.00 0.00 0.00 4.46 F
1705 3450 0.322816 ACCGTTTGATGATGCCTGCT 60.323 50.000 0.00 0.00 0.00 4.24 F
3067 4865 0.106116 CGGCTAGGGTTAGGTCTCCT 60.106 60.000 0.00 0.00 37.71 3.69 F
3971 5823 0.452184 CGGCGCCTCGTAGATGATAT 59.548 55.000 26.68 0.00 33.89 1.63 F
4947 6914 0.106116 CGGCTAGGGTTAGGTCTCCT 60.106 60.000 0.00 0.00 37.71 3.69 F
5836 7817 0.033920 GGTCAGCTTGCAAAAAGGGG 59.966 55.000 0.00 0.00 0.00 4.79 F
6862 9281 2.261671 GTCGCTCGCCAAGGAAGA 59.738 61.111 0.00 0.00 0.00 2.87 F
7611 10173 1.936547 CTCACTGCGCCTCCTATTTTC 59.063 52.381 4.18 0.00 0.00 2.29 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2403 4160 1.066071 GTAGTCCTCTTCACCTTGGCC 60.066 57.143 0.00 0.00 0.00 5.36 R
2915 4675 3.138468 GGAACCCAGCTCCTACCAATATT 59.862 47.826 0.00 0.00 0.00 1.28 R
3393 5194 1.068250 GGAGGCTGCGGACTACATC 59.932 63.158 5.43 0.00 29.80 3.06 R
4821 6772 1.272313 ACAACCTACGAGCTAGACCCA 60.272 52.381 0.00 0.00 0.00 4.51 R
5397 7378 1.993391 GATCCCACGGTCTTCCCCA 60.993 63.158 0.00 0.00 0.00 4.96 R
6112 8136 0.921896 ACAAGGCTGATGCACCCTAT 59.078 50.000 0.00 0.00 41.91 2.57 R
7060 9526 1.019650 TTCCTTCTAGGCTCTCCCCT 58.980 55.000 0.00 0.00 39.05 4.79 R
7981 10543 0.107993 TGCAAGCTAGCTAGTGCAGG 60.108 55.000 31.02 12.27 41.85 4.85 R
9512 12092 0.036388 CCAACATGCCTACGAGGTGT 60.036 55.000 0.00 0.00 37.80 4.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
223 224 2.553602 TGCACTTGTGGTAGCTCATTTG 59.446 45.455 0.00 0.16 0.00 2.32
316 317 4.494091 TGCTCATTTTGGTTTTGGGAAA 57.506 36.364 0.00 0.00 0.00 3.13
333 334 7.487822 TTGGGAAAGCCAATACATTGATTTA 57.512 32.000 3.48 0.00 40.14 1.40
452 454 6.693315 ACTTCTTTCGAACCAAAGATGAAA 57.307 33.333 16.19 0.00 41.11 2.69
480 482 7.373493 AGAAGAATGCAAAATCAAGAATTCGT 58.627 30.769 0.00 0.00 35.39 3.85
488 490 8.461222 TGCAAAATCAAGAATTCGTAGATCAAT 58.539 29.630 0.00 0.00 35.04 2.57
518 520 6.106648 TGCATGGAGAAGATATTAGTCCAG 57.893 41.667 9.02 4.09 40.60 3.86
552 554 6.494835 AGCAGTTATGGAAGTTGGAAATCTTT 59.505 34.615 0.00 0.00 0.00 2.52
567 569 9.558396 TTGGAAATCTTTTGAAATGCATACTTT 57.442 25.926 0.00 0.00 0.00 2.66
573 575 8.729805 TCTTTTGAAATGCATACTTTTGGTTT 57.270 26.923 0.00 0.00 0.00 3.27
582 584 7.078011 TGCATACTTTTGGTTTTTGTTTTCC 57.922 32.000 0.00 0.00 0.00 3.13
583 585 6.655003 TGCATACTTTTGGTTTTTGTTTTCCA 59.345 30.769 0.00 0.00 0.00 3.53
586 588 6.507958 ACTTTTGGTTTTTGTTTTCCATGG 57.492 33.333 4.97 4.97 0.00 3.66
639 641 8.970691 ATGTCTTTTGTATCTAATGTTGTTGC 57.029 30.769 0.00 0.00 0.00 4.17
680 682 9.403110 GCATTATGCTAGATCAATTTAAGTTGG 57.597 33.333 10.27 0.00 40.96 3.77
697 699 8.604890 TTTAAGTTGGAAAATTAAGTTTTGCGG 58.395 29.630 1.98 0.00 45.45 5.69
700 702 2.739913 GGAAAATTAAGTTTTGCGGGCC 59.260 45.455 1.98 0.00 40.04 5.80
701 703 2.073117 AAATTAAGTTTTGCGGGCCG 57.927 45.000 24.35 24.35 0.00 6.13
702 704 0.245266 AATTAAGTTTTGCGGGCCGG 59.755 50.000 29.48 9.71 0.00 6.13
703 705 1.600511 ATTAAGTTTTGCGGGCCGGG 61.601 55.000 29.48 0.00 0.00 5.73
704 706 2.693896 TTAAGTTTTGCGGGCCGGGA 62.694 55.000 29.48 6.40 0.00 5.14
719 721 3.859414 GGAGGAGCTGCGCCAGAT 61.859 66.667 22.86 3.57 32.44 2.90
720 722 2.280052 GAGGAGCTGCGCCAGATC 60.280 66.667 24.28 10.74 44.92 2.75
723 725 2.498248 GAGCTGCGCCAGATCAGA 59.502 61.111 16.58 0.00 44.99 3.27
724 726 1.882167 GAGCTGCGCCAGATCAGAC 60.882 63.158 16.58 0.03 44.99 3.51
725 727 3.260483 GCTGCGCCAGATCAGACG 61.260 66.667 4.18 0.00 32.44 4.18
728 730 4.819761 GCGCCAGATCAGACGCCA 62.820 66.667 7.57 0.00 45.35 5.69
729 731 2.887568 CGCCAGATCAGACGCCAC 60.888 66.667 0.00 0.00 0.00 5.01
730 732 2.265739 GCCAGATCAGACGCCACA 59.734 61.111 0.00 0.00 0.00 4.17
731 733 1.375908 GCCAGATCAGACGCCACAA 60.376 57.895 0.00 0.00 0.00 3.33
732 734 0.955428 GCCAGATCAGACGCCACAAA 60.955 55.000 0.00 0.00 0.00 2.83
733 735 1.081892 CCAGATCAGACGCCACAAAG 58.918 55.000 0.00 0.00 0.00 2.77
734 736 0.445436 CAGATCAGACGCCACAAAGC 59.555 55.000 0.00 0.00 0.00 3.51
735 737 0.674895 AGATCAGACGCCACAAAGCC 60.675 55.000 0.00 0.00 0.00 4.35
736 738 1.970917 GATCAGACGCCACAAAGCCG 61.971 60.000 0.00 0.00 0.00 5.52
737 739 2.449031 ATCAGACGCCACAAAGCCGA 62.449 55.000 0.00 0.00 0.00 5.54
738 740 2.665185 AGACGCCACAAAGCCGAC 60.665 61.111 0.00 0.00 0.00 4.79
739 741 3.723348 GACGCCACAAAGCCGACC 61.723 66.667 0.00 0.00 0.00 4.79
743 745 2.344500 CCACAAAGCCGACCCGTA 59.656 61.111 0.00 0.00 0.00 4.02
744 746 1.301874 CCACAAAGCCGACCCGTAA 60.302 57.895 0.00 0.00 0.00 3.18
745 747 0.885596 CCACAAAGCCGACCCGTAAA 60.886 55.000 0.00 0.00 0.00 2.01
746 748 0.945813 CACAAAGCCGACCCGTAAAA 59.054 50.000 0.00 0.00 0.00 1.52
747 749 1.334243 CACAAAGCCGACCCGTAAAAA 59.666 47.619 0.00 0.00 0.00 1.94
792 794 6.779115 TTTTTACGGATCCATCATCATACG 57.221 37.500 13.41 0.00 32.33 3.06
793 795 4.450082 TTACGGATCCATCATCATACGG 57.550 45.455 13.41 0.00 32.33 4.02
794 796 1.550524 ACGGATCCATCATCATACGGG 59.449 52.381 13.41 0.00 32.33 5.28
795 797 1.134699 CGGATCCATCATCATACGGGG 60.135 57.143 13.41 0.00 32.33 5.73
796 798 1.909302 GGATCCATCATCATACGGGGT 59.091 52.381 6.95 0.00 32.33 4.95
797 799 2.093447 GGATCCATCATCATACGGGGTC 60.093 54.545 6.95 0.00 32.33 4.46
798 800 2.095604 TCCATCATCATACGGGGTCA 57.904 50.000 0.00 0.00 0.00 4.02
799 801 1.970640 TCCATCATCATACGGGGTCAG 59.029 52.381 0.00 0.00 0.00 3.51
800 802 1.694150 CCATCATCATACGGGGTCAGT 59.306 52.381 0.00 0.00 0.00 3.41
801 803 2.897326 CCATCATCATACGGGGTCAGTA 59.103 50.000 0.00 0.00 0.00 2.74
802 804 3.323691 CCATCATCATACGGGGTCAGTAA 59.676 47.826 0.00 0.00 0.00 2.24
803 805 4.307432 CATCATCATACGGGGTCAGTAAC 58.693 47.826 0.00 0.00 0.00 2.50
804 806 3.638860 TCATCATACGGGGTCAGTAACT 58.361 45.455 0.00 0.00 0.00 2.24
805 807 3.383505 TCATCATACGGGGTCAGTAACTG 59.616 47.826 0.00 0.00 0.00 3.16
806 808 2.811410 TCATACGGGGTCAGTAACTGT 58.189 47.619 0.00 0.00 32.61 3.55
807 809 2.494471 TCATACGGGGTCAGTAACTGTG 59.506 50.000 0.00 0.00 32.61 3.66
808 810 1.259609 TACGGGGTCAGTAACTGTGG 58.740 55.000 0.00 0.00 32.61 4.17
809 811 1.375523 CGGGGTCAGTAACTGTGGC 60.376 63.158 0.00 0.00 32.61 5.01
810 812 1.002502 GGGGTCAGTAACTGTGGCC 60.003 63.158 0.00 0.00 32.61 5.36
811 813 1.375523 GGGTCAGTAACTGTGGCCG 60.376 63.158 0.00 0.00 32.61 6.13
812 814 1.370064 GGTCAGTAACTGTGGCCGT 59.630 57.895 0.00 0.00 32.61 5.68
813 815 0.669625 GGTCAGTAACTGTGGCCGTC 60.670 60.000 0.00 0.00 32.61 4.79
814 816 0.669625 GTCAGTAACTGTGGCCGTCC 60.670 60.000 0.00 0.00 32.61 4.79
815 817 1.736645 CAGTAACTGTGGCCGTCCG 60.737 63.158 0.00 0.00 34.14 4.79
816 818 3.116531 GTAACTGTGGCCGTCCGC 61.117 66.667 0.00 0.00 43.16 5.54
817 819 4.728102 TAACTGTGGCCGTCCGCG 62.728 66.667 0.00 0.00 45.79 6.46
834 836 3.138128 GCCGGCCCGTAAAAGCAT 61.138 61.111 18.11 0.00 0.00 3.79
835 837 2.706834 GCCGGCCCGTAAAAGCATT 61.707 57.895 18.11 0.00 0.00 3.56
836 838 1.887301 CCGGCCCGTAAAAGCATTT 59.113 52.632 0.85 0.00 42.41 2.32
849 851 4.018649 AAAGCATTTTTGCACAAACTGC 57.981 36.364 19.36 19.36 40.46 4.40
857 859 3.028760 GCACAAACTGCAAACACGT 57.971 47.368 0.00 0.00 46.29 4.49
858 860 1.345410 GCACAAACTGCAAACACGTT 58.655 45.000 0.00 0.00 46.29 3.99
859 861 1.724082 GCACAAACTGCAAACACGTTT 59.276 42.857 0.00 0.00 46.29 3.60
860 862 2.156697 GCACAAACTGCAAACACGTTTT 59.843 40.909 0.00 0.00 46.29 2.43
861 863 3.719974 CACAAACTGCAAACACGTTTTG 58.280 40.909 14.77 14.77 30.04 2.44
879 881 2.885861 CGGGTCGCTAGAGTTGCT 59.114 61.111 0.00 0.00 0.00 3.91
880 882 1.226717 CGGGTCGCTAGAGTTGCTC 60.227 63.158 0.00 0.00 0.00 4.26
881 883 1.658686 CGGGTCGCTAGAGTTGCTCT 61.659 60.000 4.02 4.02 43.83 4.09
882 884 1.390565 GGGTCGCTAGAGTTGCTCTA 58.609 55.000 0.00 5.84 41.50 2.43
883 885 1.749634 GGGTCGCTAGAGTTGCTCTAA 59.250 52.381 7.22 0.00 41.74 2.10
884 886 2.479901 GGGTCGCTAGAGTTGCTCTAAC 60.480 54.545 7.22 2.71 41.74 2.34
885 887 2.479901 GGTCGCTAGAGTTGCTCTAACC 60.480 54.545 7.22 8.07 41.74 2.85
886 888 2.163815 GTCGCTAGAGTTGCTCTAACCA 59.836 50.000 7.22 0.00 41.74 3.67
887 889 2.163815 TCGCTAGAGTTGCTCTAACCAC 59.836 50.000 7.22 0.00 41.74 4.16
888 890 2.531206 GCTAGAGTTGCTCTAACCACG 58.469 52.381 7.22 0.00 41.74 4.94
889 891 2.094649 GCTAGAGTTGCTCTAACCACGT 60.095 50.000 7.22 0.00 41.74 4.49
890 892 2.726832 AGAGTTGCTCTAACCACGTC 57.273 50.000 0.00 0.00 39.28 4.34
891 893 1.068472 AGAGTTGCTCTAACCACGTCG 60.068 52.381 0.00 0.00 39.28 5.12
892 894 0.672342 AGTTGCTCTAACCACGTCGT 59.328 50.000 0.00 0.00 40.24 4.34
893 895 1.881973 AGTTGCTCTAACCACGTCGTA 59.118 47.619 0.00 0.00 40.24 3.43
894 896 2.294233 AGTTGCTCTAACCACGTCGTAA 59.706 45.455 0.00 0.00 40.24 3.18
895 897 2.624316 TGCTCTAACCACGTCGTAAG 57.376 50.000 0.00 0.00 0.00 2.34
896 898 3.610114 GTTGCTCTAACCACGTCGTAAGA 60.610 47.826 0.00 0.00 37.39 2.10
897 899 5.083180 GTTGCTCTAACCACGTCGTAAGAA 61.083 45.833 0.00 0.00 40.06 2.52
898 900 6.842467 GTTGCTCTAACCACGTCGTAAGAAG 61.842 48.000 0.00 0.00 40.06 2.85
899 901 8.907562 GTTGCTCTAACCACGTCGTAAGAAGA 62.908 46.154 0.00 0.00 40.06 2.87
911 913 4.406001 CGTAAGAAGAAGAAAGCCCAAC 57.594 45.455 0.00 0.00 43.02 3.77
912 914 3.120649 CGTAAGAAGAAGAAAGCCCAACG 60.121 47.826 0.00 0.00 43.02 4.10
913 915 2.930826 AGAAGAAGAAAGCCCAACGA 57.069 45.000 0.00 0.00 0.00 3.85
914 916 2.495084 AGAAGAAGAAAGCCCAACGAC 58.505 47.619 0.00 0.00 0.00 4.34
915 917 1.535896 GAAGAAGAAAGCCCAACGACC 59.464 52.381 0.00 0.00 0.00 4.79
916 918 0.250770 AGAAGAAAGCCCAACGACCC 60.251 55.000 0.00 0.00 0.00 4.46
917 919 0.536460 GAAGAAAGCCCAACGACCCA 60.536 55.000 0.00 0.00 0.00 4.51
918 920 0.537371 AAGAAAGCCCAACGACCCAG 60.537 55.000 0.00 0.00 0.00 4.45
929 931 3.021695 CAACGACCCAGAGTAGGATACA 58.978 50.000 0.00 0.00 46.26 2.29
953 955 2.437413 GGAACAAACCTAGAGCCCAAG 58.563 52.381 0.00 0.00 0.00 3.61
1010 1020 1.153756 ACCCCAGCCCAGAAAACTG 59.846 57.895 0.00 0.00 0.00 3.16
1334 1349 1.306568 GTCCTCCTCCAAGCCCTCT 60.307 63.158 0.00 0.00 0.00 3.69
1345 1360 2.026822 CCAAGCCCTCTCTTTCTTGCTA 60.027 50.000 0.00 0.00 35.76 3.49
1346 1361 3.006247 CAAGCCCTCTCTTTCTTGCTAC 58.994 50.000 0.00 0.00 31.02 3.58
1347 1362 1.557371 AGCCCTCTCTTTCTTGCTACC 59.443 52.381 0.00 0.00 0.00 3.18
1348 1363 1.279271 GCCCTCTCTTTCTTGCTACCA 59.721 52.381 0.00 0.00 0.00 3.25
1349 1364 2.679349 GCCCTCTCTTTCTTGCTACCAG 60.679 54.545 0.00 0.00 0.00 4.00
1350 1365 2.569404 CCCTCTCTTTCTTGCTACCAGT 59.431 50.000 0.00 0.00 0.00 4.00
1351 1366 3.008485 CCCTCTCTTTCTTGCTACCAGTT 59.992 47.826 0.00 0.00 0.00 3.16
1352 1367 4.249661 CCTCTCTTTCTTGCTACCAGTTC 58.750 47.826 0.00 0.00 0.00 3.01
1353 1368 4.249661 CTCTCTTTCTTGCTACCAGTTCC 58.750 47.826 0.00 0.00 0.00 3.62
1354 1369 3.646162 TCTCTTTCTTGCTACCAGTTCCA 59.354 43.478 0.00 0.00 0.00 3.53
1355 1370 4.287067 TCTCTTTCTTGCTACCAGTTCCAT 59.713 41.667 0.00 0.00 0.00 3.41
1356 1371 5.483937 TCTCTTTCTTGCTACCAGTTCCATA 59.516 40.000 0.00 0.00 0.00 2.74
1357 1372 5.734720 TCTTTCTTGCTACCAGTTCCATAG 58.265 41.667 0.00 0.00 0.00 2.23
1358 1373 5.248477 TCTTTCTTGCTACCAGTTCCATAGT 59.752 40.000 0.00 0.00 0.00 2.12
1359 1374 6.439375 TCTTTCTTGCTACCAGTTCCATAGTA 59.561 38.462 0.00 0.00 0.00 1.82
1360 1375 5.854010 TCTTGCTACCAGTTCCATAGTAG 57.146 43.478 0.00 0.00 36.19 2.57
1361 1376 4.649674 TCTTGCTACCAGTTCCATAGTAGG 59.350 45.833 0.00 0.00 34.16 3.18
1362 1377 4.259933 TGCTACCAGTTCCATAGTAGGA 57.740 45.455 0.00 0.00 34.16 2.94
1363 1378 4.816126 TGCTACCAGTTCCATAGTAGGAT 58.184 43.478 0.00 0.00 37.56 3.24
1364 1379 4.833380 TGCTACCAGTTCCATAGTAGGATC 59.167 45.833 0.00 0.00 37.56 3.36
1365 1380 4.833380 GCTACCAGTTCCATAGTAGGATCA 59.167 45.833 0.00 0.00 37.56 2.92
1366 1381 5.304614 GCTACCAGTTCCATAGTAGGATCAA 59.695 44.000 0.00 0.00 37.56 2.57
1367 1382 6.183360 GCTACCAGTTCCATAGTAGGATCAAA 60.183 42.308 0.00 0.00 37.56 2.69
1368 1383 6.831664 ACCAGTTCCATAGTAGGATCAAAT 57.168 37.500 0.00 0.00 37.56 2.32
1369 1384 6.831976 ACCAGTTCCATAGTAGGATCAAATC 58.168 40.000 0.00 0.00 37.56 2.17
1370 1385 6.386927 ACCAGTTCCATAGTAGGATCAAATCA 59.613 38.462 0.00 0.00 37.56 2.57
1371 1386 7.092444 ACCAGTTCCATAGTAGGATCAAATCAA 60.092 37.037 0.00 0.00 37.56 2.57
1372 1387 7.227512 CCAGTTCCATAGTAGGATCAAATCAAC 59.772 40.741 0.00 0.00 37.56 3.18
1373 1388 7.770433 CAGTTCCATAGTAGGATCAAATCAACA 59.230 37.037 0.00 0.00 37.56 3.33
1374 1389 7.989741 AGTTCCATAGTAGGATCAAATCAACAG 59.010 37.037 0.00 0.00 37.56 3.16
1375 1390 6.291377 TCCATAGTAGGATCAAATCAACAGC 58.709 40.000 0.00 0.00 31.23 4.40
1376 1391 6.100279 TCCATAGTAGGATCAAATCAACAGCT 59.900 38.462 0.00 0.00 31.23 4.24
1377 1392 6.769822 CCATAGTAGGATCAAATCAACAGCTT 59.230 38.462 0.00 0.00 0.00 3.74
1378 1393 7.255035 CCATAGTAGGATCAAATCAACAGCTTG 60.255 40.741 0.00 0.00 0.00 4.01
1379 1394 4.946157 AGTAGGATCAAATCAACAGCTTGG 59.054 41.667 0.00 0.00 0.00 3.61
1380 1395 4.038271 AGGATCAAATCAACAGCTTGGA 57.962 40.909 0.00 0.00 0.00 3.53
1381 1396 4.607239 AGGATCAAATCAACAGCTTGGAT 58.393 39.130 0.00 0.00 0.00 3.41
1382 1397 4.401519 AGGATCAAATCAACAGCTTGGATG 59.598 41.667 0.00 0.00 0.00 3.51
1383 1398 3.581024 TCAAATCAACAGCTTGGATGC 57.419 42.857 0.00 0.00 0.00 3.91
1384 1399 2.231964 TCAAATCAACAGCTTGGATGCC 59.768 45.455 0.00 0.00 0.00 4.40
1385 1400 1.188863 AATCAACAGCTTGGATGCCC 58.811 50.000 0.00 0.00 0.00 5.36
1392 1448 0.698238 AGCTTGGATGCCCAGTGTTA 59.302 50.000 0.00 0.00 44.60 2.41
1409 1465 7.084486 CCAGTGTTACCTTTTCTTTAGCATTC 58.916 38.462 0.00 0.00 0.00 2.67
1504 1571 7.624360 AGATAGATCTCCTCGTATTAAGCAG 57.376 40.000 0.00 0.00 29.30 4.24
1705 3450 0.322816 ACCGTTTGATGATGCCTGCT 60.323 50.000 0.00 0.00 0.00 4.24
1830 3577 5.277538 CCAACTTGAACTTCTTAGAGCACAC 60.278 44.000 0.00 0.00 0.00 3.82
1889 3636 7.881142 TGTTTATGTTGTAGAAACCCAATCAG 58.119 34.615 0.00 0.00 39.22 2.90
2354 4111 5.364157 GGTAGAAGAGTATCCAGGTGAATGT 59.636 44.000 0.00 0.00 33.66 2.71
2403 4160 9.926158 ATCTTGCTCTATATCAGTACAGAATTG 57.074 33.333 0.00 0.00 0.00 2.32
2480 4240 4.814234 TCTCTGAGATCTTTACTCTCGAGC 59.186 45.833 7.81 0.00 41.70 5.03
2823 4583 7.882791 TCTGAAATTAGTAATCAAGCAGGACAA 59.117 33.333 0.00 0.00 0.00 3.18
3067 4865 0.106116 CGGCTAGGGTTAGGTCTCCT 60.106 60.000 0.00 0.00 37.71 3.69
3123 4923 5.403897 TTCTGCTTAACTTCAAACGAGTG 57.596 39.130 0.00 0.00 0.00 3.51
3188 4988 7.104290 GCTAAGCCCCTAATAACGATAAGATT 58.896 38.462 0.00 0.00 0.00 2.40
3196 4996 7.310485 CCCTAATAACGATAAGATTACTGGGCT 60.310 40.741 0.00 0.00 0.00 5.19
3339 5140 3.056328 GCGCCAAACACCTCCTCC 61.056 66.667 0.00 0.00 0.00 4.30
3340 5141 2.742372 CGCCAAACACCTCCTCCG 60.742 66.667 0.00 0.00 0.00 4.63
3341 5142 3.056328 GCCAAACACCTCCTCCGC 61.056 66.667 0.00 0.00 0.00 5.54
3473 5274 1.202568 CGTCGCAGTTGAAGCACAG 59.797 57.895 0.00 0.00 0.00 3.66
3693 5513 1.227764 CATGGCCATCTGGAGGTCG 60.228 63.158 17.61 0.00 37.39 4.79
3971 5823 0.452184 CGGCGCCTCGTAGATGATAT 59.548 55.000 26.68 0.00 33.89 1.63
4303 6162 3.005539 ATGCGGCTGTCCTGAGGT 61.006 61.111 0.00 0.00 0.00 3.85
4304 6163 2.596851 ATGCGGCTGTCCTGAGGTT 61.597 57.895 0.00 0.00 0.00 3.50
4315 6174 3.945921 TGTCCTGAGGTTATCGTGTAGAG 59.054 47.826 0.00 0.00 0.00 2.43
4316 6175 3.946558 GTCCTGAGGTTATCGTGTAGAGT 59.053 47.826 0.00 0.00 0.00 3.24
4379 6239 2.841317 GGGGGAAAACGGACCTGT 59.159 61.111 0.00 0.00 0.00 4.00
4739 6690 3.723235 GAAGAGGCGATCGGCAGCA 62.723 63.158 38.28 0.00 46.16 4.41
4802 6753 3.452264 TGAGACACCTGATACCAGATTGG 59.548 47.826 0.00 0.00 43.02 3.16
4947 6914 0.106116 CGGCTAGGGTTAGGTCTCCT 60.106 60.000 0.00 0.00 37.71 3.69
5397 7378 3.159213 TGATCTGAAACATTGGGCAGT 57.841 42.857 0.00 0.00 0.00 4.40
5510 7491 3.614092 ACTCACTGCACAATATGAAGGG 58.386 45.455 0.00 0.00 39.07 3.95
5568 7549 3.461061 TCTCATGTGTATGCTAGCTTGC 58.539 45.455 17.23 13.56 34.21 4.01
5641 7622 3.308323 GCTCAGTCGATCCTGAAATTCAC 59.692 47.826 7.12 0.00 40.78 3.18
5643 7624 2.604914 CAGTCGATCCTGAAATTCACCG 59.395 50.000 0.00 0.00 34.23 4.94
5836 7817 0.033920 GGTCAGCTTGCAAAAAGGGG 59.966 55.000 0.00 0.00 0.00 4.79
6184 8208 3.265221 TCCAATCTCTTGATGCAGACCTT 59.735 43.478 0.00 0.00 34.04 3.50
6185 8209 4.015084 CCAATCTCTTGATGCAGACCTTT 58.985 43.478 0.00 0.00 34.04 3.11
6612 8692 6.375174 ACAGATATGAAATTGTGCAGCAAGTA 59.625 34.615 0.00 0.00 40.86 2.24
6639 8719 6.457355 CCAAGATTGATCAAAATTCACCACA 58.543 36.000 13.09 0.00 0.00 4.17
6862 9281 2.261671 GTCGCTCGCCAAGGAAGA 59.738 61.111 0.00 0.00 0.00 2.87
7060 9526 5.777449 TGAGAGGAAACATATGTAGGAGGA 58.223 41.667 9.21 0.00 0.00 3.71
7061 9527 5.835819 TGAGAGGAAACATATGTAGGAGGAG 59.164 44.000 9.21 0.00 0.00 3.69
7062 9528 5.151454 AGAGGAAACATATGTAGGAGGAGG 58.849 45.833 9.21 0.00 0.00 4.30
7241 9717 2.044946 GGAGAGCCAACGCCCAAT 60.045 61.111 0.00 0.00 34.57 3.16
7449 9927 4.577283 ACGTGTGTGCCTTTTTATTAGTGT 59.423 37.500 0.00 0.00 0.00 3.55
7611 10173 1.936547 CTCACTGCGCCTCCTATTTTC 59.063 52.381 4.18 0.00 0.00 2.29
7705 10267 5.177142 CGACAACATGAATTGCCATGAAAAA 59.823 36.000 12.68 0.00 44.98 1.94
7838 10400 4.023107 TGTTCTCTGTGACCTAAGTCGAAG 60.023 45.833 0.00 0.00 46.74 3.79
7849 10411 4.158025 ACCTAAGTCGAAGTAGGTCATGTG 59.842 45.833 18.38 0.00 45.76 3.21
7980 10542 9.617975 GTGAACCATCTAATTTTCAGAAGAAAG 57.382 33.333 0.00 0.00 44.03 2.62
7981 10543 8.299570 TGAACCATCTAATTTTCAGAAGAAAGC 58.700 33.333 0.00 0.00 44.03 3.51
7986 10548 4.942761 AATTTTCAGAAGAAAGCCTGCA 57.057 36.364 0.00 0.00 44.03 4.41
8120 10682 6.091986 TGGTGATTTGTTTCTGTTTTGCTTTC 59.908 34.615 0.00 0.00 0.00 2.62
8212 10774 6.418057 AATTGGTTTCTTTGCATTGTCCTA 57.582 33.333 0.00 0.00 0.00 2.94
8254 10816 2.723322 TCAAGGATGATCTTGGCCTG 57.277 50.000 3.32 0.00 43.05 4.85
8400 10962 2.419667 CAAAGCCAAATGAGCAAAGGG 58.580 47.619 0.00 0.00 0.00 3.95
8411 10973 1.979155 GCAAAGGGCTTGGTCCTCC 60.979 63.158 0.00 0.00 36.17 4.30
8424 10986 2.158813 TGGTCCTCCACTTGTTCAAGTC 60.159 50.000 14.22 3.86 39.03 3.01
8446 11008 1.884075 TACCGCCATGAAGCTCGTGT 61.884 55.000 0.00 0.00 31.62 4.49
8461 11023 3.494626 GCTCGTGTTCAGATGAGAAACAA 59.505 43.478 0.00 0.00 31.50 2.83
8479 11041 3.894759 ACAATTCCTCTGCATGCTGTAT 58.105 40.909 20.33 8.48 0.00 2.29
8523 11085 0.240945 CAATTTCGAGCACCGCCTTT 59.759 50.000 0.00 0.00 38.37 3.11
8536 11098 4.261447 GCACCGCCTTTTCCGAATAATATT 60.261 41.667 0.00 0.00 0.00 1.28
8588 11159 9.103861 CCTGTATGGAGTTTTCTTAAAGATCTC 57.896 37.037 0.00 0.00 38.35 2.75
8605 11176 0.322997 CTCTGTCCTGAGTCTCCGGT 60.323 60.000 9.87 0.00 0.00 5.28
8684 11255 7.912056 ATTTACTCATATATGCGCTGAATGT 57.088 32.000 9.73 1.39 0.00 2.71
9268 11848 1.567504 TAGACAGAAAATAGCGCGGC 58.432 50.000 8.83 0.00 0.00 6.53
9269 11849 0.391130 AGACAGAAAATAGCGCGGCA 60.391 50.000 8.83 0.00 0.00 5.69
9270 11850 0.657840 GACAGAAAATAGCGCGGCAT 59.342 50.000 8.83 0.00 0.00 4.40
9271 11851 0.378257 ACAGAAAATAGCGCGGCATG 59.622 50.000 8.83 0.00 0.00 4.06
9272 11852 0.317269 CAGAAAATAGCGCGGCATGG 60.317 55.000 8.83 0.00 0.00 3.66
9273 11853 1.008538 GAAAATAGCGCGGCATGGG 60.009 57.895 8.83 0.00 0.00 4.00
9274 11854 2.406452 GAAAATAGCGCGGCATGGGG 62.406 60.000 8.83 0.00 0.00 4.96
9285 11865 4.506255 CATGGGGCCCTCCGGTTC 62.506 72.222 25.93 2.81 36.01 3.62
9311 11891 2.359975 CCCCCAAGTTCGCTCCAC 60.360 66.667 0.00 0.00 0.00 4.02
9312 11892 2.429930 CCCCAAGTTCGCTCCACA 59.570 61.111 0.00 0.00 0.00 4.17
9313 11893 1.228124 CCCCAAGTTCGCTCCACAA 60.228 57.895 0.00 0.00 0.00 3.33
9314 11894 1.515521 CCCCAAGTTCGCTCCACAAC 61.516 60.000 0.00 0.00 0.00 3.32
9315 11895 0.535102 CCCAAGTTCGCTCCACAACT 60.535 55.000 0.00 0.00 34.16 3.16
9316 11896 0.588252 CCAAGTTCGCTCCACAACTG 59.412 55.000 0.00 0.00 33.01 3.16
9317 11897 0.040958 CAAGTTCGCTCCACAACTGC 60.041 55.000 0.00 0.00 33.01 4.40
9318 11898 1.166531 AAGTTCGCTCCACAACTGCC 61.167 55.000 0.00 0.00 33.01 4.85
9319 11899 2.664851 TTCGCTCCACAACTGCCG 60.665 61.111 0.00 0.00 0.00 5.69
9320 11900 3.158537 TTCGCTCCACAACTGCCGA 62.159 57.895 0.00 0.00 0.00 5.54
9321 11901 3.114616 CGCTCCACAACTGCCGAG 61.115 66.667 0.00 0.00 0.00 4.63
9322 11902 2.031163 GCTCCACAACTGCCGAGT 59.969 61.111 0.00 0.00 0.00 4.18
9323 11903 1.598130 GCTCCACAACTGCCGAGTT 60.598 57.895 0.00 0.00 43.63 3.01
9324 11904 1.569479 GCTCCACAACTGCCGAGTTC 61.569 60.000 0.00 0.00 40.68 3.01
9325 11905 0.951040 CTCCACAACTGCCGAGTTCC 60.951 60.000 0.00 0.00 40.68 3.62
9326 11906 1.227823 CCACAACTGCCGAGTTCCA 60.228 57.895 0.00 0.00 40.68 3.53
9327 11907 0.817634 CCACAACTGCCGAGTTCCAA 60.818 55.000 0.00 0.00 40.68 3.53
9328 11908 0.307760 CACAACTGCCGAGTTCCAAC 59.692 55.000 0.00 0.00 40.68 3.77
9329 11909 0.180406 ACAACTGCCGAGTTCCAACT 59.820 50.000 0.00 0.00 40.68 3.16
9330 11910 1.308998 CAACTGCCGAGTTCCAACTT 58.691 50.000 0.00 0.00 40.68 2.66
9331 11911 1.676006 CAACTGCCGAGTTCCAACTTT 59.324 47.619 0.00 0.00 40.68 2.66
9332 11912 1.308998 ACTGCCGAGTTCCAACTTTG 58.691 50.000 0.00 0.00 39.88 2.77
9333 11913 1.134220 ACTGCCGAGTTCCAACTTTGA 60.134 47.619 0.00 0.00 39.88 2.69
9334 11914 2.154462 CTGCCGAGTTCCAACTTTGAT 58.846 47.619 0.00 0.00 39.88 2.57
9335 11915 2.554032 CTGCCGAGTTCCAACTTTGATT 59.446 45.455 0.00 0.00 39.88 2.57
9336 11916 2.552315 TGCCGAGTTCCAACTTTGATTC 59.448 45.455 0.00 0.00 39.88 2.52
9337 11917 2.552315 GCCGAGTTCCAACTTTGATTCA 59.448 45.455 0.00 0.00 39.88 2.57
9338 11918 3.365364 GCCGAGTTCCAACTTTGATTCAG 60.365 47.826 0.00 0.00 39.88 3.02
9339 11919 3.365364 CCGAGTTCCAACTTTGATTCAGC 60.365 47.826 0.00 0.00 39.88 4.26
9340 11920 3.250762 CGAGTTCCAACTTTGATTCAGCA 59.749 43.478 0.00 0.00 39.88 4.41
9341 11921 4.540824 GAGTTCCAACTTTGATTCAGCAC 58.459 43.478 0.00 0.00 39.88 4.40
9342 11922 3.953612 AGTTCCAACTTTGATTCAGCACA 59.046 39.130 0.00 0.00 35.21 4.57
9343 11923 3.988379 TCCAACTTTGATTCAGCACAC 57.012 42.857 0.00 0.00 0.00 3.82
9344 11924 3.554934 TCCAACTTTGATTCAGCACACT 58.445 40.909 0.00 0.00 0.00 3.55
9345 11925 3.953612 TCCAACTTTGATTCAGCACACTT 59.046 39.130 0.00 0.00 0.00 3.16
9346 11926 4.036734 TCCAACTTTGATTCAGCACACTTC 59.963 41.667 0.00 0.00 0.00 3.01
9347 11927 3.885484 ACTTTGATTCAGCACACTTCG 57.115 42.857 0.00 0.00 0.00 3.79
9348 11928 2.549754 ACTTTGATTCAGCACACTTCGG 59.450 45.455 0.00 0.00 0.00 4.30
9349 11929 0.874390 TTGATTCAGCACACTTCGGC 59.126 50.000 0.00 0.00 0.00 5.54
9350 11930 0.250252 TGATTCAGCACACTTCGGCA 60.250 50.000 0.00 0.00 0.00 5.69
9351 11931 0.166814 GATTCAGCACACTTCGGCAC 59.833 55.000 0.00 0.00 0.00 5.01
9352 11932 0.534877 ATTCAGCACACTTCGGCACA 60.535 50.000 0.00 0.00 0.00 4.57
9353 11933 0.746204 TTCAGCACACTTCGGCACAA 60.746 50.000 0.00 0.00 0.00 3.33
9354 11934 0.746204 TCAGCACACTTCGGCACAAA 60.746 50.000 0.00 0.00 0.00 2.83
9355 11935 0.311790 CAGCACACTTCGGCACAAAT 59.688 50.000 0.00 0.00 0.00 2.32
9356 11936 1.032014 AGCACACTTCGGCACAAATT 58.968 45.000 0.00 0.00 0.00 1.82
9357 11937 1.001378 AGCACACTTCGGCACAAATTC 60.001 47.619 0.00 0.00 0.00 2.17
9358 11938 1.268999 GCACACTTCGGCACAAATTCA 60.269 47.619 0.00 0.00 0.00 2.57
9359 11939 2.797792 GCACACTTCGGCACAAATTCAA 60.798 45.455 0.00 0.00 0.00 2.69
9360 11940 2.788786 CACACTTCGGCACAAATTCAAC 59.211 45.455 0.00 0.00 0.00 3.18
9361 11941 2.425312 ACACTTCGGCACAAATTCAACA 59.575 40.909 0.00 0.00 0.00 3.33
9362 11942 3.119316 ACACTTCGGCACAAATTCAACAA 60.119 39.130 0.00 0.00 0.00 2.83
9363 11943 3.862267 CACTTCGGCACAAATTCAACAAA 59.138 39.130 0.00 0.00 0.00 2.83
9364 11944 4.328440 CACTTCGGCACAAATTCAACAAAA 59.672 37.500 0.00 0.00 0.00 2.44
9365 11945 4.932200 ACTTCGGCACAAATTCAACAAAAA 59.068 33.333 0.00 0.00 0.00 1.94
9428 12008 9.180678 ACAAATTAAATAGTTCAACGAAGCAAG 57.819 29.630 0.00 0.00 0.00 4.01
9429 12009 7.796958 AATTAAATAGTTCAACGAAGCAAGC 57.203 32.000 0.00 0.00 0.00 4.01
9430 12010 4.829064 AAATAGTTCAACGAAGCAAGCA 57.171 36.364 0.00 0.00 0.00 3.91
9431 12011 4.829064 AATAGTTCAACGAAGCAAGCAA 57.171 36.364 0.00 0.00 0.00 3.91
9432 12012 2.763249 AGTTCAACGAAGCAAGCAAG 57.237 45.000 0.00 0.00 0.00 4.01
9433 12013 2.288666 AGTTCAACGAAGCAAGCAAGA 58.711 42.857 0.00 0.00 0.00 3.02
9434 12014 2.289002 AGTTCAACGAAGCAAGCAAGAG 59.711 45.455 0.00 0.00 0.00 2.85
9435 12015 0.588252 TCAACGAAGCAAGCAAGAGC 59.412 50.000 0.00 0.00 42.56 4.09
9445 12025 3.172919 GCAAGAGCGACAAGGAGC 58.827 61.111 0.00 0.00 0.00 4.70
9446 12026 1.669115 GCAAGAGCGACAAGGAGCA 60.669 57.895 0.00 0.00 35.48 4.26
9447 12027 1.023513 GCAAGAGCGACAAGGAGCAT 61.024 55.000 0.00 0.00 35.48 3.79
9448 12028 0.725686 CAAGAGCGACAAGGAGCATG 59.274 55.000 0.00 0.00 35.48 4.06
9449 12029 0.610174 AAGAGCGACAAGGAGCATGA 59.390 50.000 0.00 0.00 35.48 3.07
9450 12030 0.829333 AGAGCGACAAGGAGCATGAT 59.171 50.000 0.00 0.00 35.48 2.45
9451 12031 1.202510 AGAGCGACAAGGAGCATGATC 60.203 52.381 1.26 1.26 35.48 2.92
9452 12032 0.529337 AGCGACAAGGAGCATGATCG 60.529 55.000 4.63 0.00 35.48 3.69
9453 12033 0.807667 GCGACAAGGAGCATGATCGT 60.808 55.000 4.63 1.97 32.32 3.73
9454 12034 1.203928 CGACAAGGAGCATGATCGTC 58.796 55.000 6.63 6.99 0.00 4.20
9455 12035 1.203928 GACAAGGAGCATGATCGTCG 58.796 55.000 6.63 0.00 0.00 5.12
9456 12036 0.179100 ACAAGGAGCATGATCGTCGG 60.179 55.000 6.63 5.32 0.00 4.79
9457 12037 0.179100 CAAGGAGCATGATCGTCGGT 60.179 55.000 6.63 0.00 0.00 4.69
9458 12038 0.179100 AAGGAGCATGATCGTCGGTG 60.179 55.000 6.63 0.00 0.00 4.94
9459 12039 1.141881 GGAGCATGATCGTCGGTGT 59.858 57.895 4.63 0.00 0.00 4.16
9460 12040 0.872021 GGAGCATGATCGTCGGTGTC 60.872 60.000 4.63 0.00 0.00 3.67
9461 12041 1.202973 GAGCATGATCGTCGGTGTCG 61.203 60.000 0.00 0.00 37.82 4.35
9462 12042 2.230940 GCATGATCGTCGGTGTCGG 61.231 63.158 0.00 0.00 36.95 4.79
9463 12043 2.104331 ATGATCGTCGGTGTCGGC 59.896 61.111 0.00 0.00 37.69 5.54
9464 12044 3.426117 ATGATCGTCGGTGTCGGCC 62.426 63.158 0.00 0.00 37.80 6.13
9465 12045 3.823330 GATCGTCGGTGTCGGCCT 61.823 66.667 0.00 0.00 37.80 5.19
9466 12046 3.753070 GATCGTCGGTGTCGGCCTC 62.753 68.421 0.00 0.00 37.80 4.70
9475 12055 4.516195 GTCGGCCTCGGCTTCCTC 62.516 72.222 8.00 0.00 41.60 3.71
9478 12058 4.475135 GGCCTCGGCTTCCTCCAC 62.475 72.222 8.00 0.00 41.60 4.02
9479 12059 4.821589 GCCTCGGCTTCCTCCACG 62.822 72.222 0.00 0.00 38.26 4.94
9480 12060 3.068691 CCTCGGCTTCCTCCACGA 61.069 66.667 0.00 0.00 0.00 4.35
9481 12061 2.646175 CCTCGGCTTCCTCCACGAA 61.646 63.158 0.00 0.00 34.70 3.85
9482 12062 1.446272 CTCGGCTTCCTCCACGAAC 60.446 63.158 0.00 0.00 34.70 3.95
9483 12063 2.154798 CTCGGCTTCCTCCACGAACA 62.155 60.000 0.00 0.00 34.70 3.18
9484 12064 2.027625 CGGCTTCCTCCACGAACAC 61.028 63.158 0.00 0.00 0.00 3.32
9485 12065 1.671379 GGCTTCCTCCACGAACACC 60.671 63.158 0.00 0.00 0.00 4.16
9486 12066 1.371558 GCTTCCTCCACGAACACCT 59.628 57.895 0.00 0.00 0.00 4.00
9487 12067 0.670854 GCTTCCTCCACGAACACCTC 60.671 60.000 0.00 0.00 0.00 3.85
9495 12075 2.250485 CGAACACCTCGTCGTCGT 59.750 61.111 1.33 0.00 42.89 4.34
9496 12076 1.369689 CGAACACCTCGTCGTCGTT 60.370 57.895 1.33 0.00 42.89 3.85
9497 12077 1.594269 CGAACACCTCGTCGTCGTTG 61.594 60.000 1.33 1.32 42.89 4.10
9498 12078 1.273455 GAACACCTCGTCGTCGTTGG 61.273 60.000 12.73 12.73 38.33 3.77
9499 12079 1.727511 AACACCTCGTCGTCGTTGGA 61.728 55.000 18.46 0.00 38.33 3.53
9500 12080 1.442184 CACCTCGTCGTCGTTGGAG 60.442 63.158 18.46 10.30 38.33 3.86
9501 12081 1.895707 ACCTCGTCGTCGTTGGAGT 60.896 57.895 18.46 2.86 38.33 3.85
9502 12082 1.154263 CCTCGTCGTCGTTGGAGTC 60.154 63.158 1.33 0.00 38.33 3.36
9503 12083 1.154263 CTCGTCGTCGTTGGAGTCC 60.154 63.158 0.73 0.73 38.33 3.85
9504 12084 1.848932 CTCGTCGTCGTTGGAGTCCA 61.849 60.000 8.12 8.12 38.33 4.02
9505 12085 1.211969 CGTCGTCGTTGGAGTCCAT 59.788 57.895 14.00 0.00 31.53 3.41
9506 12086 0.797249 CGTCGTCGTTGGAGTCCATC 60.797 60.000 14.00 11.63 31.53 3.51
9507 12087 0.797249 GTCGTCGTTGGAGTCCATCG 60.797 60.000 29.04 29.04 44.94 3.84
9508 12088 2.158959 CGTCGTTGGAGTCCATCGC 61.159 63.158 29.76 23.79 43.74 4.58
9509 12089 1.810030 GTCGTTGGAGTCCATCGCC 60.810 63.158 29.76 20.01 43.74 5.54
9510 12090 2.885644 CGTTGGAGTCCATCGCCG 60.886 66.667 25.35 15.67 39.34 6.46
9511 12091 2.577059 GTTGGAGTCCATCGCCGA 59.423 61.111 14.00 0.00 38.89 5.54
9512 12092 1.079405 GTTGGAGTCCATCGCCGAA 60.079 57.895 14.00 0.00 38.89 4.30
9513 12093 1.079405 TTGGAGTCCATCGCCGAAC 60.079 57.895 14.00 0.00 38.89 3.95
9514 12094 1.822114 TTGGAGTCCATCGCCGAACA 61.822 55.000 14.00 0.00 38.89 3.18
9515 12095 1.810030 GGAGTCCATCGCCGAACAC 60.810 63.158 3.60 0.00 0.00 3.32
9516 12096 1.810030 GAGTCCATCGCCGAACACC 60.810 63.158 0.00 0.00 0.00 4.16
9517 12097 2.227089 GAGTCCATCGCCGAACACCT 62.227 60.000 0.00 0.00 0.00 4.00
9518 12098 1.810030 GTCCATCGCCGAACACCTC 60.810 63.158 0.00 0.00 0.00 3.85
9520 12100 2.126071 CATCGCCGAACACCTCGT 60.126 61.111 0.00 0.00 46.65 4.18
9521 12101 1.138036 CATCGCCGAACACCTCGTA 59.862 57.895 0.00 0.00 46.65 3.43
9522 12102 0.866061 CATCGCCGAACACCTCGTAG 60.866 60.000 0.00 0.00 46.65 3.51
9523 12103 2.001361 ATCGCCGAACACCTCGTAGG 62.001 60.000 0.00 0.03 46.65 3.18
9524 12104 2.508663 GCCGAACACCTCGTAGGC 60.509 66.667 1.36 0.00 46.65 3.93
9525 12105 2.967397 CCGAACACCTCGTAGGCA 59.033 61.111 1.36 0.00 46.65 4.75
9526 12106 1.515954 CCGAACACCTCGTAGGCAT 59.484 57.895 1.36 0.00 46.65 4.40
9527 12107 0.806102 CCGAACACCTCGTAGGCATG 60.806 60.000 1.36 0.00 46.65 4.06
9528 12108 0.108804 CGAACACCTCGTAGGCATGT 60.109 55.000 0.00 0.00 42.89 3.21
9529 12109 1.671850 CGAACACCTCGTAGGCATGTT 60.672 52.381 8.57 8.57 42.89 2.71
9530 12110 1.732259 GAACACCTCGTAGGCATGTTG 59.268 52.381 11.77 2.57 39.63 3.33
9531 12111 0.036388 ACACCTCGTAGGCATGTTGG 60.036 55.000 0.00 0.00 39.63 3.77
9532 12112 0.744414 CACCTCGTAGGCATGTTGGG 60.744 60.000 0.00 0.00 39.63 4.12
9533 12113 1.819632 CCTCGTAGGCATGTTGGGC 60.820 63.158 0.00 0.00 0.00 5.36
9534 12114 1.078497 CTCGTAGGCATGTTGGGCA 60.078 57.895 0.00 0.00 35.46 5.36
9535 12115 1.078497 TCGTAGGCATGTTGGGCAG 60.078 57.895 0.00 0.00 35.46 4.85
9536 12116 2.114670 CGTAGGCATGTTGGGCAGG 61.115 63.158 0.00 0.00 35.46 4.85
9537 12117 1.000896 GTAGGCATGTTGGGCAGGT 60.001 57.895 0.00 0.00 35.46 4.00
9538 12118 0.254747 GTAGGCATGTTGGGCAGGTA 59.745 55.000 0.00 0.00 35.46 3.08
9539 12119 1.133792 GTAGGCATGTTGGGCAGGTAT 60.134 52.381 0.00 0.00 35.46 2.73
9540 12120 0.106519 AGGCATGTTGGGCAGGTATC 60.107 55.000 0.00 0.00 35.46 2.24
9541 12121 1.109323 GGCATGTTGGGCAGGTATCC 61.109 60.000 0.00 0.00 0.00 2.59
9542 12122 0.106519 GCATGTTGGGCAGGTATCCT 60.107 55.000 0.00 0.00 0.00 3.24
9543 12123 1.972872 CATGTTGGGCAGGTATCCTC 58.027 55.000 0.00 0.00 0.00 3.71
9544 12124 0.846693 ATGTTGGGCAGGTATCCTCC 59.153 55.000 0.00 0.00 0.00 4.30
9545 12125 1.146263 GTTGGGCAGGTATCCTCCG 59.854 63.158 0.00 0.00 0.00 4.63
9546 12126 1.002403 TTGGGCAGGTATCCTCCGA 59.998 57.895 0.00 0.00 0.00 4.55
9547 12127 0.399949 TTGGGCAGGTATCCTCCGAT 60.400 55.000 0.00 0.00 0.00 4.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
97 98 2.287069 GCAGTCGTCGCACTATATGAGT 60.287 50.000 0.00 0.00 39.82 3.41
124 125 2.793831 AGTGAGCCGCAACACTTTT 58.206 47.368 14.58 0.00 43.52 2.27
223 224 7.585573 CGCAATTGAACTAAAGAATGAGCTATC 59.414 37.037 10.34 0.00 0.00 2.08
361 362 4.978083 TCGATTGTACTAAGGAGTCACC 57.022 45.455 0.00 0.00 37.10 4.02
402 404 0.324943 GCTTCCCCTCTAGTTGCACA 59.675 55.000 0.00 0.00 0.00 4.57
477 479 7.160726 TCCATGCATTCATTATTGATCTACGA 58.839 34.615 0.00 0.00 0.00 3.43
480 482 9.227777 CTTCTCCATGCATTCATTATTGATCTA 57.772 33.333 0.00 0.00 0.00 1.98
518 520 1.098050 CCATAACTGCTCCCACAAGC 58.902 55.000 0.00 0.00 42.82 4.01
552 554 8.273780 ACAAAAACCAAAAGTATGCATTTCAA 57.726 26.923 3.54 0.00 0.00 2.69
567 569 6.681777 CAAAACCATGGAAAACAAAAACCAA 58.318 32.000 21.47 0.00 36.00 3.67
573 575 7.278875 AGAATAGCAAAACCATGGAAAACAAA 58.721 30.769 21.47 0.00 0.00 2.83
680 682 2.410392 CGGCCCGCAAAACTTAATTTTC 59.590 45.455 0.00 0.00 38.50 2.29
681 683 2.409012 CGGCCCGCAAAACTTAATTTT 58.591 42.857 0.00 0.00 41.38 1.82
682 684 1.337354 CCGGCCCGCAAAACTTAATTT 60.337 47.619 0.00 0.00 0.00 1.82
683 685 0.245266 CCGGCCCGCAAAACTTAATT 59.755 50.000 0.00 0.00 0.00 1.40
684 686 1.600511 CCCGGCCCGCAAAACTTAAT 61.601 55.000 0.00 0.00 0.00 1.40
685 687 2.269529 CCCGGCCCGCAAAACTTAA 61.270 57.895 0.00 0.00 0.00 1.85
686 688 2.673687 CCCGGCCCGCAAAACTTA 60.674 61.111 0.00 0.00 0.00 2.24
687 689 4.589675 TCCCGGCCCGCAAAACTT 62.590 61.111 0.00 0.00 0.00 2.66
712 714 2.887568 GTGGCGTCTGATCTGGCG 60.888 66.667 20.68 20.68 0.00 5.69
713 715 0.955428 TTTGTGGCGTCTGATCTGGC 60.955 55.000 0.00 0.00 0.00 4.85
714 716 1.081892 CTTTGTGGCGTCTGATCTGG 58.918 55.000 0.00 0.00 0.00 3.86
715 717 0.445436 GCTTTGTGGCGTCTGATCTG 59.555 55.000 0.00 0.00 0.00 2.90
716 718 0.674895 GGCTTTGTGGCGTCTGATCT 60.675 55.000 0.00 0.00 0.00 2.75
717 719 1.796796 GGCTTTGTGGCGTCTGATC 59.203 57.895 0.00 0.00 0.00 2.92
718 720 3.987404 GGCTTTGTGGCGTCTGAT 58.013 55.556 0.00 0.00 0.00 2.90
725 727 3.887335 TACGGGTCGGCTTTGTGGC 62.887 63.158 0.00 0.00 37.94 5.01
726 728 0.885596 TTTACGGGTCGGCTTTGTGG 60.886 55.000 0.00 0.00 0.00 4.17
727 729 0.945813 TTTTACGGGTCGGCTTTGTG 59.054 50.000 0.00 0.00 0.00 3.33
728 730 1.677942 TTTTTACGGGTCGGCTTTGT 58.322 45.000 0.00 0.00 0.00 2.83
769 771 5.699001 CCGTATGATGATGGATCCGTAAAAA 59.301 40.000 6.41 0.00 0.00 1.94
770 772 5.234752 CCGTATGATGATGGATCCGTAAAA 58.765 41.667 6.41 0.00 0.00 1.52
771 773 4.322424 CCCGTATGATGATGGATCCGTAAA 60.322 45.833 6.41 0.00 0.00 2.01
772 774 3.194755 CCCGTATGATGATGGATCCGTAA 59.805 47.826 6.41 0.00 0.00 3.18
773 775 2.758423 CCCGTATGATGATGGATCCGTA 59.242 50.000 6.41 0.00 0.00 4.02
774 776 1.550524 CCCGTATGATGATGGATCCGT 59.449 52.381 6.04 6.04 0.00 4.69
775 777 1.134699 CCCCGTATGATGATGGATCCG 60.135 57.143 7.39 0.00 0.00 4.18
776 778 1.909302 ACCCCGTATGATGATGGATCC 59.091 52.381 4.20 4.20 0.00 3.36
777 779 2.567169 TGACCCCGTATGATGATGGATC 59.433 50.000 0.00 0.00 0.00 3.36
778 780 2.568956 CTGACCCCGTATGATGATGGAT 59.431 50.000 0.00 0.00 0.00 3.41
779 781 1.970640 CTGACCCCGTATGATGATGGA 59.029 52.381 0.00 0.00 0.00 3.41
780 782 1.694150 ACTGACCCCGTATGATGATGG 59.306 52.381 0.00 0.00 0.00 3.51
781 783 4.039245 AGTTACTGACCCCGTATGATGATG 59.961 45.833 0.00 0.00 0.00 3.07
782 784 4.039245 CAGTTACTGACCCCGTATGATGAT 59.961 45.833 6.50 0.00 32.44 2.45
783 785 3.383505 CAGTTACTGACCCCGTATGATGA 59.616 47.826 6.50 0.00 32.44 2.92
784 786 3.132289 ACAGTTACTGACCCCGTATGATG 59.868 47.826 20.07 0.00 35.18 3.07
785 787 3.132289 CACAGTTACTGACCCCGTATGAT 59.868 47.826 20.07 0.00 35.18 2.45
786 788 2.494471 CACAGTTACTGACCCCGTATGA 59.506 50.000 20.07 0.00 35.18 2.15
787 789 2.418197 CCACAGTTACTGACCCCGTATG 60.418 54.545 20.07 3.97 35.18 2.39
788 790 1.829222 CCACAGTTACTGACCCCGTAT 59.171 52.381 20.07 0.00 35.18 3.06
789 791 1.259609 CCACAGTTACTGACCCCGTA 58.740 55.000 20.07 0.00 35.18 4.02
790 792 2.055299 CCACAGTTACTGACCCCGT 58.945 57.895 20.07 0.00 35.18 5.28
791 793 1.375523 GCCACAGTTACTGACCCCG 60.376 63.158 20.07 2.43 35.18 5.73
792 794 1.002502 GGCCACAGTTACTGACCCC 60.003 63.158 20.07 11.11 35.18 4.95
793 795 1.375523 CGGCCACAGTTACTGACCC 60.376 63.158 20.07 13.61 35.18 4.46
794 796 0.669625 GACGGCCACAGTTACTGACC 60.670 60.000 20.07 15.03 35.18 4.02
795 797 0.669625 GGACGGCCACAGTTACTGAC 60.670 60.000 20.07 7.71 35.18 3.51
796 798 1.669440 GGACGGCCACAGTTACTGA 59.331 57.895 20.07 0.00 35.18 3.41
797 799 1.736645 CGGACGGCCACAGTTACTG 60.737 63.158 8.76 11.21 37.52 2.74
798 800 2.654877 CGGACGGCCACAGTTACT 59.345 61.111 8.76 0.00 0.00 2.24
799 801 3.116531 GCGGACGGCCACAGTTAC 61.117 66.667 8.76 0.00 34.80 2.50
800 802 4.728102 CGCGGACGGCCACAGTTA 62.728 66.667 8.76 0.00 38.94 2.24
817 819 2.220615 AAATGCTTTTACGGGCCGGC 62.221 55.000 31.78 21.18 0.00 6.13
818 820 0.245266 AAAATGCTTTTACGGGCCGG 59.755 50.000 31.78 13.14 0.00 6.13
819 821 1.724082 CAAAAATGCTTTTACGGGCCG 59.276 47.619 27.06 27.06 32.85 6.13
820 822 1.463056 GCAAAAATGCTTTTACGGGCC 59.537 47.619 0.00 0.00 32.85 5.80
821 823 2.096466 GTGCAAAAATGCTTTTACGGGC 60.096 45.455 2.22 1.63 32.85 6.13
822 824 3.126831 TGTGCAAAAATGCTTTTACGGG 58.873 40.909 2.22 0.00 32.85 5.28
823 825 4.785669 TTGTGCAAAAATGCTTTTACGG 57.214 36.364 2.22 0.00 32.85 4.02
824 826 5.671997 CAGTTTGTGCAAAAATGCTTTTACG 59.328 36.000 5.11 0.00 32.85 3.18
840 842 3.719974 CAAAACGTGTTTGCAGTTTGTG 58.280 40.909 2.19 0.99 38.02 3.33
849 851 1.197368 CGACCCGCAAAACGTGTTTG 61.197 55.000 14.77 14.77 41.42 2.93
850 852 1.062845 CGACCCGCAAAACGTGTTT 59.937 52.632 0.00 0.00 41.42 2.83
851 853 2.710698 CGACCCGCAAAACGTGTT 59.289 55.556 0.00 0.00 41.42 3.32
862 864 1.226717 GAGCAACTCTAGCGACCCG 60.227 63.158 0.00 0.00 37.01 5.28
863 865 1.390565 TAGAGCAACTCTAGCGACCC 58.609 55.000 0.16 0.00 41.50 4.46
864 866 2.479901 GGTTAGAGCAACTCTAGCGACC 60.480 54.545 10.96 9.33 42.92 4.79
865 867 2.163815 TGGTTAGAGCAACTCTAGCGAC 59.836 50.000 10.96 4.93 42.92 5.19
866 868 2.163815 GTGGTTAGAGCAACTCTAGCGA 59.836 50.000 10.96 5.92 42.92 4.93
867 869 2.531206 GTGGTTAGAGCAACTCTAGCG 58.469 52.381 10.96 0.00 42.92 4.26
868 870 2.094649 ACGTGGTTAGAGCAACTCTAGC 60.095 50.000 9.29 9.29 42.92 3.42
869 871 3.728268 CGACGTGGTTAGAGCAACTCTAG 60.728 52.174 0.00 0.00 42.92 2.43
870 872 2.161012 CGACGTGGTTAGAGCAACTCTA 59.839 50.000 0.00 0.16 41.50 2.43
871 873 1.068472 CGACGTGGTTAGAGCAACTCT 60.068 52.381 0.00 2.23 43.83 3.24
872 874 1.335689 ACGACGTGGTTAGAGCAACTC 60.336 52.381 0.00 0.00 37.30 3.01
873 875 0.672342 ACGACGTGGTTAGAGCAACT 59.328 50.000 0.00 0.00 37.30 3.16
874 876 2.336554 TACGACGTGGTTAGAGCAAC 57.663 50.000 8.96 0.00 36.32 4.17
875 877 2.553602 TCTTACGACGTGGTTAGAGCAA 59.446 45.455 14.25 0.00 0.00 3.91
876 878 2.153645 TCTTACGACGTGGTTAGAGCA 58.846 47.619 14.25 0.00 0.00 4.26
877 879 2.907910 TCTTACGACGTGGTTAGAGC 57.092 50.000 14.25 0.00 0.00 4.09
878 880 4.675190 TCTTCTTACGACGTGGTTAGAG 57.325 45.455 16.89 12.29 28.57 2.43
879 881 4.756642 TCTTCTTCTTACGACGTGGTTAGA 59.243 41.667 14.25 14.25 0.00 2.10
880 882 5.039480 TCTTCTTCTTACGACGTGGTTAG 57.961 43.478 8.96 9.58 0.00 2.34
881 883 5.437289 TTCTTCTTCTTACGACGTGGTTA 57.563 39.130 8.96 0.00 0.00 2.85
882 884 3.996150 TCTTCTTCTTACGACGTGGTT 57.004 42.857 8.96 0.00 0.00 3.67
883 885 3.996150 TTCTTCTTCTTACGACGTGGT 57.004 42.857 11.56 8.64 0.00 4.16
884 886 3.121445 GCTTTCTTCTTCTTACGACGTGG 59.879 47.826 11.56 0.00 0.00 4.94
885 887 3.121445 GGCTTTCTTCTTCTTACGACGTG 59.879 47.826 11.56 0.00 0.00 4.49
886 888 3.315418 GGCTTTCTTCTTCTTACGACGT 58.685 45.455 5.52 5.52 0.00 4.34
887 889 2.666994 GGGCTTTCTTCTTCTTACGACG 59.333 50.000 0.00 0.00 0.00 5.12
888 890 3.660865 TGGGCTTTCTTCTTCTTACGAC 58.339 45.455 0.00 0.00 0.00 4.34
889 891 4.062991 GTTGGGCTTTCTTCTTCTTACGA 58.937 43.478 0.00 0.00 0.00 3.43
890 892 3.120649 CGTTGGGCTTTCTTCTTCTTACG 60.121 47.826 0.00 0.00 0.00 3.18
891 893 4.062991 TCGTTGGGCTTTCTTCTTCTTAC 58.937 43.478 0.00 0.00 0.00 2.34
892 894 4.062991 GTCGTTGGGCTTTCTTCTTCTTA 58.937 43.478 0.00 0.00 0.00 2.10
893 895 2.879026 GTCGTTGGGCTTTCTTCTTCTT 59.121 45.455 0.00 0.00 0.00 2.52
894 896 2.495084 GTCGTTGGGCTTTCTTCTTCT 58.505 47.619 0.00 0.00 0.00 2.85
895 897 1.535896 GGTCGTTGGGCTTTCTTCTTC 59.464 52.381 0.00 0.00 0.00 2.87
896 898 1.605753 GGTCGTTGGGCTTTCTTCTT 58.394 50.000 0.00 0.00 0.00 2.52
897 899 0.250770 GGGTCGTTGGGCTTTCTTCT 60.251 55.000 0.00 0.00 0.00 2.85
898 900 0.536460 TGGGTCGTTGGGCTTTCTTC 60.536 55.000 0.00 0.00 0.00 2.87
899 901 0.537371 CTGGGTCGTTGGGCTTTCTT 60.537 55.000 0.00 0.00 0.00 2.52
900 902 1.073199 CTGGGTCGTTGGGCTTTCT 59.927 57.895 0.00 0.00 0.00 2.52
901 903 0.955919 CTCTGGGTCGTTGGGCTTTC 60.956 60.000 0.00 0.00 0.00 2.62
902 904 1.073199 CTCTGGGTCGTTGGGCTTT 59.927 57.895 0.00 0.00 0.00 3.51
903 905 0.834687 TACTCTGGGTCGTTGGGCTT 60.835 55.000 0.00 0.00 0.00 4.35
904 906 1.229082 TACTCTGGGTCGTTGGGCT 60.229 57.895 0.00 0.00 0.00 5.19
905 907 1.218316 CTACTCTGGGTCGTTGGGC 59.782 63.158 0.00 0.00 0.00 5.36
906 908 0.613853 TCCTACTCTGGGTCGTTGGG 60.614 60.000 0.00 0.00 0.00 4.12
907 909 1.486211 ATCCTACTCTGGGTCGTTGG 58.514 55.000 0.00 0.00 0.00 3.77
908 910 3.021695 TGTATCCTACTCTGGGTCGTTG 58.978 50.000 0.00 0.00 0.00 4.10
909 911 3.022406 GTGTATCCTACTCTGGGTCGTT 58.978 50.000 0.00 0.00 0.00 3.85
910 912 2.652590 GTGTATCCTACTCTGGGTCGT 58.347 52.381 0.00 0.00 0.00 4.34
911 913 1.955080 GGTGTATCCTACTCTGGGTCG 59.045 57.143 0.00 0.00 0.00 4.79
912 914 1.955080 CGGTGTATCCTACTCTGGGTC 59.045 57.143 0.00 0.00 0.00 4.46
913 915 1.411216 CCGGTGTATCCTACTCTGGGT 60.411 57.143 0.00 0.00 42.30 4.51
914 916 1.329256 CCGGTGTATCCTACTCTGGG 58.671 60.000 0.00 0.00 42.30 4.45
915 917 1.133575 TCCCGGTGTATCCTACTCTGG 60.134 57.143 0.00 7.08 44.43 3.86
916 918 2.359981 TCCCGGTGTATCCTACTCTG 57.640 55.000 0.00 0.00 0.00 3.35
917 919 2.024655 TGTTCCCGGTGTATCCTACTCT 60.025 50.000 0.00 0.00 0.00 3.24
918 920 2.381911 TGTTCCCGGTGTATCCTACTC 58.618 52.381 0.00 0.00 0.00 2.59
929 931 0.323957 GCTCTAGGTTTGTTCCCGGT 59.676 55.000 0.00 0.00 0.00 5.28
953 955 2.340328 CGGCAGGGTTTTAGGCCAC 61.340 63.158 5.01 0.00 46.75 5.01
1320 1335 1.203364 AGAAAGAGAGGGCTTGGAGGA 60.203 52.381 0.00 0.00 0.00 3.71
1334 1349 4.640771 ATGGAACTGGTAGCAAGAAAGA 57.359 40.909 0.00 0.00 0.00 2.52
1345 1360 6.386927 TGATTTGATCCTACTATGGAACTGGT 59.613 38.462 0.00 0.00 39.85 4.00
1346 1361 6.830912 TGATTTGATCCTACTATGGAACTGG 58.169 40.000 0.00 0.00 39.85 4.00
1347 1362 7.770433 TGTTGATTTGATCCTACTATGGAACTG 59.230 37.037 0.00 0.00 39.85 3.16
1348 1363 7.861629 TGTTGATTTGATCCTACTATGGAACT 58.138 34.615 0.00 0.00 39.85 3.01
1349 1364 7.254932 GCTGTTGATTTGATCCTACTATGGAAC 60.255 40.741 0.00 0.00 39.85 3.62
1350 1365 6.767902 GCTGTTGATTTGATCCTACTATGGAA 59.232 38.462 0.00 0.00 39.85 3.53
1351 1366 6.100279 AGCTGTTGATTTGATCCTACTATGGA 59.900 38.462 0.00 0.00 40.82 3.41
1352 1367 6.294473 AGCTGTTGATTTGATCCTACTATGG 58.706 40.000 0.00 0.00 0.00 2.74
1353 1368 7.255035 CCAAGCTGTTGATTTGATCCTACTATG 60.255 40.741 0.00 0.00 35.46 2.23
1354 1369 6.769822 CCAAGCTGTTGATTTGATCCTACTAT 59.230 38.462 0.00 0.00 35.46 2.12
1355 1370 6.070251 TCCAAGCTGTTGATTTGATCCTACTA 60.070 38.462 0.00 0.00 35.46 1.82
1356 1371 4.946157 CCAAGCTGTTGATTTGATCCTACT 59.054 41.667 0.00 0.00 35.46 2.57
1357 1372 4.943705 TCCAAGCTGTTGATTTGATCCTAC 59.056 41.667 0.00 0.00 35.46 3.18
1358 1373 5.178096 TCCAAGCTGTTGATTTGATCCTA 57.822 39.130 0.00 0.00 35.46 2.94
1359 1374 4.038271 TCCAAGCTGTTGATTTGATCCT 57.962 40.909 0.00 0.00 35.46 3.24
1360 1375 4.679662 CATCCAAGCTGTTGATTTGATCC 58.320 43.478 0.00 0.00 35.46 3.36
1361 1376 4.110482 GCATCCAAGCTGTTGATTTGATC 58.890 43.478 0.00 0.00 35.46 2.92
1362 1377 3.118884 GGCATCCAAGCTGTTGATTTGAT 60.119 43.478 0.00 0.00 35.46 2.57
1363 1378 2.231964 GGCATCCAAGCTGTTGATTTGA 59.768 45.455 0.00 0.00 35.46 2.69
1364 1379 2.613691 GGCATCCAAGCTGTTGATTTG 58.386 47.619 0.00 0.00 35.46 2.32
1365 1380 1.551883 GGGCATCCAAGCTGTTGATTT 59.448 47.619 0.00 0.00 35.46 2.17
1366 1381 1.188863 GGGCATCCAAGCTGTTGATT 58.811 50.000 0.00 0.00 35.46 2.57
1367 1382 0.040058 TGGGCATCCAAGCTGTTGAT 59.960 50.000 0.00 0.00 40.73 2.57
1368 1383 0.609957 CTGGGCATCCAAGCTGTTGA 60.610 55.000 0.00 0.00 43.51 3.18
1369 1384 0.896940 ACTGGGCATCCAAGCTGTTG 60.897 55.000 0.00 0.00 43.51 3.33
1370 1385 0.896940 CACTGGGCATCCAAGCTGTT 60.897 55.000 0.00 0.00 43.51 3.16
1371 1386 1.303888 CACTGGGCATCCAAGCTGT 60.304 57.895 0.00 0.00 43.51 4.40
1372 1387 0.896940 AACACTGGGCATCCAAGCTG 60.897 55.000 0.00 0.00 43.51 4.24
1373 1388 0.698238 TAACACTGGGCATCCAAGCT 59.302 50.000 0.00 0.00 43.51 3.74
1374 1389 0.811281 GTAACACTGGGCATCCAAGC 59.189 55.000 0.00 0.00 43.51 4.01
1375 1390 1.004745 AGGTAACACTGGGCATCCAAG 59.995 52.381 0.00 0.00 40.77 3.61
1376 1391 1.072266 AGGTAACACTGGGCATCCAA 58.928 50.000 0.00 0.00 40.77 3.53
1377 1392 1.072266 AAGGTAACACTGGGCATCCA 58.928 50.000 0.00 0.00 39.38 3.41
1378 1393 2.215942 AAAGGTAACACTGGGCATCC 57.784 50.000 0.00 0.00 41.41 3.51
1379 1394 3.421844 AGAAAAGGTAACACTGGGCATC 58.578 45.455 0.00 0.00 41.41 3.91
1380 1395 3.525800 AGAAAAGGTAACACTGGGCAT 57.474 42.857 0.00 0.00 41.41 4.40
1381 1396 3.306472 AAGAAAAGGTAACACTGGGCA 57.694 42.857 0.00 0.00 41.41 5.36
1382 1397 4.321008 GCTAAAGAAAAGGTAACACTGGGC 60.321 45.833 0.00 0.00 41.41 5.36
1383 1398 4.825085 TGCTAAAGAAAAGGTAACACTGGG 59.175 41.667 0.00 0.00 41.41 4.45
1384 1399 6.575162 ATGCTAAAGAAAAGGTAACACTGG 57.425 37.500 0.00 0.00 41.41 4.00
1385 1400 7.040409 AGGAATGCTAAAGAAAAGGTAACACTG 60.040 37.037 0.00 0.00 41.41 3.66
1392 1448 8.885693 AATCTAAGGAATGCTAAAGAAAAGGT 57.114 30.769 0.00 0.00 0.00 3.50
1409 1465 5.123979 CCTCCCAACGAAAGAAAATCTAAGG 59.876 44.000 0.00 0.00 0.00 2.69
1601 3343 3.892588 CCAGTACCACCTATTCTCTCCTC 59.107 52.174 0.00 0.00 0.00 3.71
1705 3450 6.925165 GCTTGGAAAATTCAACAAGATTCTGA 59.075 34.615 15.82 0.00 42.07 3.27
1830 3577 2.095110 TGCTTTCATGCAACGGATCTTG 60.095 45.455 0.00 0.00 40.29 3.02
1889 3636 3.494048 GGATGGATGGATCTGTCAGTCAC 60.494 52.174 0.00 0.00 0.00 3.67
2009 3757 4.621991 TCTTAGGCAAGCGATCAGTAATC 58.378 43.478 0.00 0.00 0.00 1.75
2010 3758 4.100189 ACTCTTAGGCAAGCGATCAGTAAT 59.900 41.667 0.00 0.00 0.00 1.89
2109 3858 4.060205 GGTAGTTTGCAAAGTCGTCCTAA 58.940 43.478 22.47 1.01 0.00 2.69
2354 4111 6.769134 TCTCTGGACGTATCAACTGAATTA 57.231 37.500 0.00 0.00 0.00 1.40
2403 4160 1.066071 GTAGTCCTCTTCACCTTGGCC 60.066 57.143 0.00 0.00 0.00 5.36
2915 4675 3.138468 GGAACCCAGCTCCTACCAATATT 59.862 47.826 0.00 0.00 0.00 1.28
2941 4701 1.272313 ACAACCTACGAGCTAGACCCA 60.272 52.381 0.00 0.00 0.00 4.51
3028 4822 4.925861 GCCTCCTGCGCCATCTCC 62.926 72.222 4.18 0.00 0.00 3.71
3067 4865 2.367202 CGGCTTCCTAAGGGAGCCA 61.367 63.158 25.59 2.05 46.60 4.75
3213 5013 1.893801 GACCGGCATATACTACAGCCT 59.106 52.381 0.00 0.00 44.85 4.58
3299 5100 2.352814 CGTTGATCACCTCGAGGAGTTT 60.353 50.000 37.69 20.63 38.94 2.66
3341 5142 4.263572 TGCCCACCCCAGTTGACG 62.264 66.667 0.00 0.00 0.00 4.35
3393 5194 1.068250 GGAGGCTGCGGACTACATC 59.932 63.158 5.43 0.00 29.80 3.06
3550 5354 4.314440 TGCTCAGGCTTTCGCGGT 62.314 61.111 6.13 0.00 39.59 5.68
3799 5643 1.340502 TGTTCCTCACCACAGTGCAAA 60.341 47.619 0.00 0.00 44.16 3.68
3971 5823 4.147449 CGCACCTGGATCGCCTCA 62.147 66.667 0.00 0.00 34.31 3.86
4213 6071 2.198287 GCTGCGGGTCCCTACGATA 61.198 63.158 6.29 0.00 0.00 2.92
4273 6132 1.739929 CCGCATGTGCTGTTACCGA 60.740 57.895 0.00 0.00 39.32 4.69
4303 6162 2.635714 TCGAGCCACTCTACACGATAA 58.364 47.619 0.00 0.00 0.00 1.75
4304 6163 2.320745 TCGAGCCACTCTACACGATA 57.679 50.000 0.00 0.00 0.00 2.92
4506 6455 4.033776 CACCACCATCACGGGGCT 62.034 66.667 0.00 0.00 36.51 5.19
4821 6772 1.272313 ACAACCTACGAGCTAGACCCA 60.272 52.381 0.00 0.00 0.00 4.51
5156 7125 6.288941 TCATATCTAAGGGTGTTGTTCGAA 57.711 37.500 0.00 0.00 0.00 3.71
5159 7128 6.183360 GCACTTCATATCTAAGGGTGTTGTTC 60.183 42.308 0.00 0.00 29.70 3.18
5397 7378 1.993391 GATCCCACGGTCTTCCCCA 60.993 63.158 0.00 0.00 0.00 4.96
5510 7491 4.329801 TGTGAGTGATTCGACATGTATTGC 59.670 41.667 0.00 0.00 0.00 3.56
5568 7549 2.806608 ATGAAGCAACAACAAGCCAG 57.193 45.000 0.00 0.00 0.00 4.85
5641 7622 3.609853 TGGAGATTTCACAAGGAATCGG 58.390 45.455 0.00 0.00 34.91 4.18
5643 7624 7.031975 GTCAATTGGAGATTTCACAAGGAATC 58.968 38.462 5.42 0.00 34.91 2.52
5836 7817 7.627340 TCTTTTGTTTGTTCACGAAGATAGAC 58.373 34.615 0.00 0.00 0.00 2.59
5942 7954 9.607988 TGTCGTGATTAGGTAAATACATCAATT 57.392 29.630 0.00 0.00 0.00 2.32
5995 8016 6.106673 GTGTAGTCTGCCATAGTGTTTGTAT 58.893 40.000 0.00 0.00 0.00 2.29
5996 8017 5.475719 GTGTAGTCTGCCATAGTGTTTGTA 58.524 41.667 0.00 0.00 0.00 2.41
6112 8136 0.921896 ACAAGGCTGATGCACCCTAT 59.078 50.000 0.00 0.00 41.91 2.57
6612 8692 6.168389 GGTGAATTTTGATCAATCTTGGCTT 58.832 36.000 9.40 0.00 0.00 4.35
7060 9526 1.019650 TTCCTTCTAGGCTCTCCCCT 58.980 55.000 0.00 0.00 39.05 4.79
7061 9527 1.765904 CTTTCCTTCTAGGCTCTCCCC 59.234 57.143 0.00 0.00 34.61 4.81
7062 9528 2.432874 GTCTTTCCTTCTAGGCTCTCCC 59.567 54.545 0.00 0.00 34.61 4.30
7241 9717 2.079170 CTCCTCCTGAGCATCCAGTA 57.921 55.000 0.00 0.00 33.47 2.74
7428 9906 5.827666 ACACACTAATAAAAAGGCACACAC 58.172 37.500 0.00 0.00 0.00 3.82
7449 9927 6.710295 ACATAAGCATAGTGTTGACAAGAACA 59.290 34.615 0.00 0.00 33.36 3.18
7471 9949 1.184431 TTGCCCATGCGAATCAACAT 58.816 45.000 0.00 0.00 41.78 2.71
7611 10173 7.303634 ACTAGTGTTTTGTACAACTCAAGTG 57.696 36.000 8.07 6.46 38.80 3.16
7705 10267 4.388485 GGAGGTCATGGCAAAACAATTTT 58.612 39.130 0.00 0.00 0.00 1.82
7708 10270 1.901833 GGGAGGTCATGGCAAAACAAT 59.098 47.619 0.00 0.00 0.00 2.71
7722 10284 1.913762 CTGACGTTCCCTGGGAGGT 60.914 63.158 16.38 17.43 31.93 3.85
7838 10400 4.832248 TCCAATCACTTCACATGACCTAC 58.168 43.478 0.00 0.00 0.00 3.18
7849 10411 8.964420 TTATTCGTTTGAAATCCAATCACTTC 57.036 30.769 0.00 0.00 37.71 3.01
7980 10542 1.435408 GCAAGCTAGCTAGTGCAGGC 61.435 60.000 28.48 15.76 42.74 4.85
7981 10543 0.107993 TGCAAGCTAGCTAGTGCAGG 60.108 55.000 31.02 12.27 41.85 4.85
7986 10548 2.996631 AGCAAATGCAAGCTAGCTAGT 58.003 42.857 19.70 0.00 45.16 2.57
8079 10641 0.899717 ACCATGCCCAAACGCTGAAT 60.900 50.000 0.00 0.00 0.00 2.57
8120 10682 0.240945 GCAATTCAGTCCACCCAACG 59.759 55.000 0.00 0.00 0.00 4.10
8212 10774 1.565759 TGGGCATCTGCTTTCACCTAT 59.434 47.619 1.70 0.00 41.70 2.57
8254 10816 3.265791 CTCTACTGCATCCAAACTGTCC 58.734 50.000 0.00 0.00 0.00 4.02
8424 10986 0.652592 CGAGCTTCATGGCGGTAAAG 59.347 55.000 0.00 0.00 37.29 1.85
8446 11008 5.413833 GCAGAGGAATTGTTTCTCATCTGAA 59.586 40.000 15.62 0.00 38.15 3.02
8461 11023 3.572632 ACATACAGCATGCAGAGGAAT 57.427 42.857 21.98 4.98 42.53 3.01
8479 11041 2.485795 GCGCACAACCCCAGAAACA 61.486 57.895 0.30 0.00 0.00 2.83
8588 11159 0.969894 AAACCGGAGACTCAGGACAG 59.030 55.000 26.12 2.17 35.20 3.51
8605 11176 4.155099 TCGCAACTCAGTCTTCAAAACAAA 59.845 37.500 0.00 0.00 0.00 2.83
8684 11255 8.692110 AACGATGATACGACTTGTATTACAAA 57.308 30.769 10.32 0.00 43.87 2.83
9249 11829 1.134936 TGCCGCGCTATTTTCTGTCTA 60.135 47.619 5.56 0.00 0.00 2.59
9250 11830 0.391130 TGCCGCGCTATTTTCTGTCT 60.391 50.000 5.56 0.00 0.00 3.41
9251 11831 0.657840 ATGCCGCGCTATTTTCTGTC 59.342 50.000 5.56 0.00 0.00 3.51
9252 11832 0.378257 CATGCCGCGCTATTTTCTGT 59.622 50.000 5.56 0.00 0.00 3.41
9253 11833 0.317269 CCATGCCGCGCTATTTTCTG 60.317 55.000 5.56 0.00 0.00 3.02
9254 11834 1.447317 CCCATGCCGCGCTATTTTCT 61.447 55.000 5.56 0.00 0.00 2.52
9255 11835 1.008538 CCCATGCCGCGCTATTTTC 60.009 57.895 5.56 0.00 0.00 2.29
9256 11836 2.489275 CCCCATGCCGCGCTATTTT 61.489 57.895 5.56 0.00 0.00 1.82
9257 11837 2.906897 CCCCATGCCGCGCTATTT 60.907 61.111 5.56 0.00 0.00 1.40
9294 11874 2.359975 GTGGAGCGAACTTGGGGG 60.360 66.667 0.00 0.00 0.00 5.40
9295 11875 1.228124 TTGTGGAGCGAACTTGGGG 60.228 57.895 0.00 0.00 0.00 4.96
9296 11876 0.535102 AGTTGTGGAGCGAACTTGGG 60.535 55.000 0.00 0.00 0.00 4.12
9297 11877 0.588252 CAGTTGTGGAGCGAACTTGG 59.412 55.000 0.00 0.00 29.73 3.61
9298 11878 0.040958 GCAGTTGTGGAGCGAACTTG 60.041 55.000 0.00 0.00 29.73 3.16
9299 11879 1.166531 GGCAGTTGTGGAGCGAACTT 61.167 55.000 0.00 0.00 29.73 2.66
9300 11880 1.598130 GGCAGTTGTGGAGCGAACT 60.598 57.895 0.00 0.00 32.48 3.01
9301 11881 2.946762 GGCAGTTGTGGAGCGAAC 59.053 61.111 0.00 0.00 0.00 3.95
9302 11882 2.664851 CGGCAGTTGTGGAGCGAA 60.665 61.111 0.00 0.00 0.00 4.70
9303 11883 3.573772 CTCGGCAGTTGTGGAGCGA 62.574 63.158 0.00 0.00 0.00 4.93
9304 11884 3.114616 CTCGGCAGTTGTGGAGCG 61.115 66.667 0.00 0.00 0.00 5.03
9305 11885 1.569479 GAACTCGGCAGTTGTGGAGC 61.569 60.000 6.99 0.00 43.37 4.70
9306 11886 0.951040 GGAACTCGGCAGTTGTGGAG 60.951 60.000 6.99 0.00 43.37 3.86
9307 11887 1.070786 GGAACTCGGCAGTTGTGGA 59.929 57.895 6.99 0.00 43.37 4.02
9308 11888 0.817634 TTGGAACTCGGCAGTTGTGG 60.818 55.000 6.99 0.00 43.37 4.17
9309 11889 0.307760 GTTGGAACTCGGCAGTTGTG 59.692 55.000 6.99 0.00 43.37 3.33
9310 11890 0.180406 AGTTGGAACTCGGCAGTTGT 59.820 50.000 6.99 0.00 43.37 3.32
9311 11891 1.308998 AAGTTGGAACTCGGCAGTTG 58.691 50.000 6.99 0.00 43.37 3.16
9312 11892 1.676006 CAAAGTTGGAACTCGGCAGTT 59.324 47.619 2.63 2.63 46.21 3.16
9313 11893 1.134220 TCAAAGTTGGAACTCGGCAGT 60.134 47.619 0.00 0.00 38.57 4.40
9314 11894 1.593196 TCAAAGTTGGAACTCGGCAG 58.407 50.000 0.00 0.00 38.57 4.85
9315 11895 2.270352 ATCAAAGTTGGAACTCGGCA 57.730 45.000 0.00 0.00 38.57 5.69
9316 11896 2.552315 TGAATCAAAGTTGGAACTCGGC 59.448 45.455 0.00 0.00 38.57 5.54
9317 11897 3.365364 GCTGAATCAAAGTTGGAACTCGG 60.365 47.826 0.00 0.00 38.57 4.63
9318 11898 3.250762 TGCTGAATCAAAGTTGGAACTCG 59.749 43.478 0.00 0.00 38.57 4.18
9319 11899 4.036734 TGTGCTGAATCAAAGTTGGAACTC 59.963 41.667 0.00 0.00 38.57 3.01
9320 11900 3.953612 TGTGCTGAATCAAAGTTGGAACT 59.046 39.130 0.00 0.00 42.04 3.01
9321 11901 4.044426 GTGTGCTGAATCAAAGTTGGAAC 58.956 43.478 0.00 0.00 0.00 3.62
9322 11902 3.953612 AGTGTGCTGAATCAAAGTTGGAA 59.046 39.130 0.00 0.00 0.00 3.53
9323 11903 3.554934 AGTGTGCTGAATCAAAGTTGGA 58.445 40.909 0.00 0.00 0.00 3.53
9324 11904 3.996150 AGTGTGCTGAATCAAAGTTGG 57.004 42.857 0.00 0.00 0.00 3.77
9325 11905 3.970610 CGAAGTGTGCTGAATCAAAGTTG 59.029 43.478 0.00 0.00 0.00 3.16
9326 11906 3.003689 CCGAAGTGTGCTGAATCAAAGTT 59.996 43.478 0.00 0.00 0.00 2.66
9327 11907 2.549754 CCGAAGTGTGCTGAATCAAAGT 59.450 45.455 0.00 0.00 0.00 2.66
9328 11908 2.666619 GCCGAAGTGTGCTGAATCAAAG 60.667 50.000 0.00 0.00 0.00 2.77
9329 11909 1.266718 GCCGAAGTGTGCTGAATCAAA 59.733 47.619 0.00 0.00 0.00 2.69
9330 11910 0.874390 GCCGAAGTGTGCTGAATCAA 59.126 50.000 0.00 0.00 0.00 2.57
9331 11911 0.250252 TGCCGAAGTGTGCTGAATCA 60.250 50.000 0.00 0.00 0.00 2.57
9332 11912 0.166814 GTGCCGAAGTGTGCTGAATC 59.833 55.000 0.00 0.00 0.00 2.52
9333 11913 0.534877 TGTGCCGAAGTGTGCTGAAT 60.535 50.000 0.00 0.00 0.00 2.57
9334 11914 0.746204 TTGTGCCGAAGTGTGCTGAA 60.746 50.000 0.00 0.00 0.00 3.02
9335 11915 0.746204 TTTGTGCCGAAGTGTGCTGA 60.746 50.000 0.00 0.00 0.00 4.26
9336 11916 0.311790 ATTTGTGCCGAAGTGTGCTG 59.688 50.000 0.00 0.00 0.00 4.41
9337 11917 1.001378 GAATTTGTGCCGAAGTGTGCT 60.001 47.619 0.00 0.00 0.00 4.40
9338 11918 1.268999 TGAATTTGTGCCGAAGTGTGC 60.269 47.619 0.00 0.00 0.00 4.57
9339 11919 2.772568 TGAATTTGTGCCGAAGTGTG 57.227 45.000 0.00 0.00 0.00 3.82
9340 11920 2.425312 TGTTGAATTTGTGCCGAAGTGT 59.575 40.909 0.00 0.00 0.00 3.55
9341 11921 3.077229 TGTTGAATTTGTGCCGAAGTG 57.923 42.857 0.00 0.00 0.00 3.16
9342 11922 3.791973 TTGTTGAATTTGTGCCGAAGT 57.208 38.095 0.00 0.00 0.00 3.01
9343 11923 5.462034 TTTTTGTTGAATTTGTGCCGAAG 57.538 34.783 0.00 0.00 0.00 3.79
9402 11982 9.180678 CTTGCTTCGTTGAACTATTTAATTTGT 57.819 29.630 0.00 0.00 0.00 2.83
9403 11983 8.155923 GCTTGCTTCGTTGAACTATTTAATTTG 58.844 33.333 0.00 0.00 0.00 2.32
9404 11984 7.865385 TGCTTGCTTCGTTGAACTATTTAATTT 59.135 29.630 0.00 0.00 0.00 1.82
9405 11985 7.367285 TGCTTGCTTCGTTGAACTATTTAATT 58.633 30.769 0.00 0.00 0.00 1.40
9406 11986 6.908825 TGCTTGCTTCGTTGAACTATTTAAT 58.091 32.000 0.00 0.00 0.00 1.40
9407 11987 6.307031 TGCTTGCTTCGTTGAACTATTTAA 57.693 33.333 0.00 0.00 0.00 1.52
9408 11988 5.933187 TGCTTGCTTCGTTGAACTATTTA 57.067 34.783 0.00 0.00 0.00 1.40
9409 11989 4.829064 TGCTTGCTTCGTTGAACTATTT 57.171 36.364 0.00 0.00 0.00 1.40
9410 11990 4.515191 TCTTGCTTGCTTCGTTGAACTATT 59.485 37.500 0.00 0.00 0.00 1.73
9411 11991 4.065088 TCTTGCTTGCTTCGTTGAACTAT 58.935 39.130 0.00 0.00 0.00 2.12
9412 11992 3.462982 TCTTGCTTGCTTCGTTGAACTA 58.537 40.909 0.00 0.00 0.00 2.24
9413 11993 2.288666 TCTTGCTTGCTTCGTTGAACT 58.711 42.857 0.00 0.00 0.00 3.01
9414 11994 2.644078 CTCTTGCTTGCTTCGTTGAAC 58.356 47.619 0.00 0.00 0.00 3.18
9415 11995 1.002468 GCTCTTGCTTGCTTCGTTGAA 60.002 47.619 0.00 0.00 36.03 2.69
9416 11996 0.588252 GCTCTTGCTTGCTTCGTTGA 59.412 50.000 0.00 0.00 36.03 3.18
9417 11997 0.723790 CGCTCTTGCTTGCTTCGTTG 60.724 55.000 0.00 0.00 36.97 4.10
9418 11998 0.880278 TCGCTCTTGCTTGCTTCGTT 60.880 50.000 0.00 0.00 36.97 3.85
9419 11999 1.300931 TCGCTCTTGCTTGCTTCGT 60.301 52.632 0.00 0.00 36.97 3.85
9420 12000 1.131420 GTCGCTCTTGCTTGCTTCG 59.869 57.895 0.00 0.00 36.97 3.79
9421 12001 0.588252 TTGTCGCTCTTGCTTGCTTC 59.412 50.000 0.00 0.00 36.97 3.86
9422 12002 0.590195 CTTGTCGCTCTTGCTTGCTT 59.410 50.000 0.00 0.00 36.97 3.91
9423 12003 1.233285 CCTTGTCGCTCTTGCTTGCT 61.233 55.000 0.00 0.00 36.97 3.91
9424 12004 1.208614 CCTTGTCGCTCTTGCTTGC 59.791 57.895 0.00 0.00 36.97 4.01
9425 12005 0.795085 CTCCTTGTCGCTCTTGCTTG 59.205 55.000 0.00 0.00 36.97 4.01
9426 12006 0.952984 GCTCCTTGTCGCTCTTGCTT 60.953 55.000 0.00 0.00 36.97 3.91
9427 12007 1.375268 GCTCCTTGTCGCTCTTGCT 60.375 57.895 0.00 0.00 36.97 3.91
9428 12008 1.023513 ATGCTCCTTGTCGCTCTTGC 61.024 55.000 0.00 0.00 0.00 4.01
9429 12009 0.725686 CATGCTCCTTGTCGCTCTTG 59.274 55.000 0.00 0.00 0.00 3.02
9430 12010 0.610174 TCATGCTCCTTGTCGCTCTT 59.390 50.000 0.00 0.00 0.00 2.85
9431 12011 0.829333 ATCATGCTCCTTGTCGCTCT 59.171 50.000 0.00 0.00 0.00 4.09
9432 12012 1.216122 GATCATGCTCCTTGTCGCTC 58.784 55.000 0.00 0.00 0.00 5.03
9433 12013 0.529337 CGATCATGCTCCTTGTCGCT 60.529 55.000 0.00 0.00 0.00 4.93
9434 12014 0.807667 ACGATCATGCTCCTTGTCGC 60.808 55.000 0.00 0.00 32.78 5.19
9435 12015 1.203928 GACGATCATGCTCCTTGTCG 58.796 55.000 0.00 0.00 35.42 4.35
9436 12016 1.203928 CGACGATCATGCTCCTTGTC 58.796 55.000 0.00 0.00 0.00 3.18
9437 12017 0.179100 CCGACGATCATGCTCCTTGT 60.179 55.000 0.00 0.00 0.00 3.16
9438 12018 0.179100 ACCGACGATCATGCTCCTTG 60.179 55.000 0.00 0.00 0.00 3.61
9439 12019 0.179100 CACCGACGATCATGCTCCTT 60.179 55.000 0.00 0.00 0.00 3.36
9440 12020 1.323271 ACACCGACGATCATGCTCCT 61.323 55.000 0.00 0.00 0.00 3.69
9441 12021 0.872021 GACACCGACGATCATGCTCC 60.872 60.000 0.00 0.00 0.00 4.70
9442 12022 1.202973 CGACACCGACGATCATGCTC 61.203 60.000 0.00 0.00 38.22 4.26
9443 12023 1.226688 CGACACCGACGATCATGCT 60.227 57.895 0.00 0.00 38.22 3.79
9444 12024 2.230940 CCGACACCGACGATCATGC 61.231 63.158 0.00 0.00 38.22 4.06
9445 12025 2.230940 GCCGACACCGACGATCATG 61.231 63.158 0.00 0.00 38.22 3.07
9446 12026 2.104331 GCCGACACCGACGATCAT 59.896 61.111 0.00 0.00 38.22 2.45
9447 12027 4.124351 GGCCGACACCGACGATCA 62.124 66.667 0.00 0.00 38.22 2.92
9448 12028 3.753070 GAGGCCGACACCGACGATC 62.753 68.421 0.00 0.00 38.22 3.69
9449 12029 3.823330 GAGGCCGACACCGACGAT 61.823 66.667 0.00 0.00 38.22 3.73
9458 12038 4.516195 GAGGAAGCCGAGGCCGAC 62.516 72.222 10.95 0.96 43.17 4.79
9461 12041 4.475135 GTGGAGGAAGCCGAGGCC 62.475 72.222 10.95 0.00 43.17 5.19
9462 12042 4.821589 CGTGGAGGAAGCCGAGGC 62.822 72.222 5.89 5.89 42.33 4.70
9463 12043 2.646175 TTCGTGGAGGAAGCCGAGG 61.646 63.158 0.00 0.00 0.00 4.63
9464 12044 1.446272 GTTCGTGGAGGAAGCCGAG 60.446 63.158 0.00 0.00 0.00 4.63
9465 12045 2.204461 TGTTCGTGGAGGAAGCCGA 61.204 57.895 0.00 0.00 0.00 5.54
9466 12046 2.027625 GTGTTCGTGGAGGAAGCCG 61.028 63.158 0.00 0.00 0.00 5.52
9467 12047 1.671379 GGTGTTCGTGGAGGAAGCC 60.671 63.158 0.00 0.00 0.00 4.35
9468 12048 0.670854 GAGGTGTTCGTGGAGGAAGC 60.671 60.000 0.00 0.00 0.00 3.86
9469 12049 0.388649 CGAGGTGTTCGTGGAGGAAG 60.389 60.000 0.00 0.00 44.27 3.46
9470 12050 1.663739 CGAGGTGTTCGTGGAGGAA 59.336 57.895 0.00 0.00 44.27 3.36
9471 12051 3.362262 CGAGGTGTTCGTGGAGGA 58.638 61.111 0.00 0.00 44.27 3.71
9479 12059 1.273455 CCAACGACGACGAGGTGTTC 61.273 60.000 15.32 0.00 42.66 3.18
9480 12060 1.299620 CCAACGACGACGAGGTGTT 60.300 57.895 15.32 0.00 42.66 3.32
9481 12061 2.126417 CTCCAACGACGACGAGGTGT 62.126 60.000 15.32 0.00 42.66 4.16
9482 12062 1.442184 CTCCAACGACGACGAGGTG 60.442 63.158 15.32 11.83 42.66 4.00
9483 12063 1.849976 GACTCCAACGACGACGAGGT 61.850 60.000 15.32 4.89 42.66 3.85
9484 12064 1.154263 GACTCCAACGACGACGAGG 60.154 63.158 15.32 14.79 42.66 4.63
9485 12065 1.154263 GGACTCCAACGACGACGAG 60.154 63.158 15.32 3.14 42.66 4.18
9486 12066 1.239296 ATGGACTCCAACGACGACGA 61.239 55.000 15.32 0.00 38.32 4.20
9487 12067 0.797249 GATGGACTCCAACGACGACG 60.797 60.000 5.58 5.58 36.95 5.12
9488 12068 3.031660 GATGGACTCCAACGACGAC 57.968 57.895 0.00 0.00 36.95 4.34
9494 12074 1.079405 TTCGGCGATGGACTCCAAC 60.079 57.895 11.76 0.00 36.95 3.77
9495 12075 1.079405 GTTCGGCGATGGACTCCAA 60.079 57.895 11.76 0.00 36.95 3.53
9496 12076 2.279810 TGTTCGGCGATGGACTCCA 61.280 57.895 11.76 0.00 38.19 3.86
9497 12077 1.810030 GTGTTCGGCGATGGACTCC 60.810 63.158 11.76 0.00 0.00 3.85
9498 12078 1.810030 GGTGTTCGGCGATGGACTC 60.810 63.158 11.76 7.09 0.00 3.36
9499 12079 2.227089 GAGGTGTTCGGCGATGGACT 62.227 60.000 11.76 7.45 0.00 3.85
9500 12080 1.810030 GAGGTGTTCGGCGATGGAC 60.810 63.158 11.76 6.87 0.00 4.02
9501 12081 2.577059 GAGGTGTTCGGCGATGGA 59.423 61.111 11.76 0.00 0.00 3.41
9502 12082 2.885644 CGAGGTGTTCGGCGATGG 60.886 66.667 11.76 0.00 45.54 3.51
9510 12090 1.732259 CAACATGCCTACGAGGTGTTC 59.268 52.381 0.00 0.00 33.77 3.18
9511 12091 1.610624 CCAACATGCCTACGAGGTGTT 60.611 52.381 0.00 0.00 35.66 3.32
9512 12092 0.036388 CCAACATGCCTACGAGGTGT 60.036 55.000 0.00 0.00 37.80 4.16
9513 12093 0.744414 CCCAACATGCCTACGAGGTG 60.744 60.000 0.00 0.00 37.80 4.00
9514 12094 1.602237 CCCAACATGCCTACGAGGT 59.398 57.895 0.00 0.00 37.80 3.85
9515 12095 1.819632 GCCCAACATGCCTACGAGG 60.820 63.158 0.00 0.00 38.80 4.63
9516 12096 1.078497 TGCCCAACATGCCTACGAG 60.078 57.895 0.00 0.00 0.00 4.18
9517 12097 1.078497 CTGCCCAACATGCCTACGA 60.078 57.895 0.00 0.00 0.00 3.43
9518 12098 2.114670 CCTGCCCAACATGCCTACG 61.115 63.158 0.00 0.00 0.00 3.51
9519 12099 0.254747 TACCTGCCCAACATGCCTAC 59.745 55.000 0.00 0.00 0.00 3.18
9520 12100 1.142870 GATACCTGCCCAACATGCCTA 59.857 52.381 0.00 0.00 0.00 3.93
9521 12101 0.106519 GATACCTGCCCAACATGCCT 60.107 55.000 0.00 0.00 0.00 4.75
9522 12102 1.109323 GGATACCTGCCCAACATGCC 61.109 60.000 0.00 0.00 0.00 4.40
9523 12103 0.106519 AGGATACCTGCCCAACATGC 60.107 55.000 0.00 0.00 29.57 4.06
9524 12104 1.477558 GGAGGATACCTGCCCAACATG 60.478 57.143 0.00 0.00 35.89 3.21
9525 12105 0.846693 GGAGGATACCTGCCCAACAT 59.153 55.000 0.00 0.00 35.89 2.71
9526 12106 1.622607 CGGAGGATACCTGCCCAACA 61.623 60.000 3.89 0.00 38.84 3.33
9527 12107 1.146263 CGGAGGATACCTGCCCAAC 59.854 63.158 3.89 0.00 38.84 3.77
9528 12108 0.399949 ATCGGAGGATACCTGCCCAA 60.400 55.000 3.89 0.00 38.84 4.12
9529 12109 1.235989 ATCGGAGGATACCTGCCCA 59.764 57.895 3.89 0.00 38.84 5.36
9530 12110 4.217112 ATCGGAGGATACCTGCCC 57.783 61.111 3.89 0.00 38.84 5.36


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.