Multiple sequence alignment - TraesCS4D01G154200

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G154200 chr4D 100.000 6776 0 0 1 6776 201896196 201902971 0.000000e+00 12514.0
1 TraesCS4D01G154200 chr4B 97.406 6014 115 11 606 6617 320325074 320331048 0.000000e+00 10203.0
2 TraesCS4D01G154200 chr4A 96.708 6106 170 17 615 6702 234132443 234126351 0.000000e+00 10133.0
3 TraesCS4D01G154200 chr4A 86.061 330 33 8 86 410 347410242 347410563 6.510000e-90 342.0
4 TraesCS4D01G154200 chr2A 86.957 483 37 8 1 483 208245654 208246110 2.800000e-143 520.0
5 TraesCS4D01G154200 chr6B 90.402 323 25 4 86 404 390012602 390012282 2.920000e-113 420.0
6 TraesCS4D01G154200 chr7A 87.576 330 29 9 86 410 692213167 692213489 8.300000e-99 372.0
7 TraesCS4D01G154200 chr7A 87.578 322 28 10 86 402 465473887 465474201 4.990000e-96 363.0
8 TraesCS4D01G154200 chr7A 97.222 36 1 0 6741 6776 39151700 39151735 2.040000e-05 62.1
9 TraesCS4D01G154200 chr3A 84.639 332 37 7 86 408 495020371 495020697 1.100000e-82 318.0
10 TraesCS4D01G154200 chr2B 84.337 332 37 8 86 408 706799570 706799245 1.840000e-80 311.0
11 TraesCS4D01G154200 chr2B 84.451 328 35 8 86 404 452777768 452777448 6.600000e-80 309.0
12 TraesCS4D01G154200 chr2B 81.325 332 51 8 86 412 799102686 799102361 6.740000e-65 259.0
13 TraesCS4D01G154200 chr1B 76.821 151 28 5 6488 6633 67644583 67644435 2.030000e-10 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G154200 chr4D 201896196 201902971 6775 False 12514 12514 100.000 1 6776 1 chr4D.!!$F1 6775
1 TraesCS4D01G154200 chr4B 320325074 320331048 5974 False 10203 10203 97.406 606 6617 1 chr4B.!!$F1 6011
2 TraesCS4D01G154200 chr4A 234126351 234132443 6092 True 10133 10133 96.708 615 6702 1 chr4A.!!$R1 6087

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
477 478 0.028770 ACAACGCACGGACATTTGTG 59.971 50.0 0.0 0.0 39.10 3.33 F
562 563 0.320160 GAGTAACGCCGAACCCAAGT 60.320 55.0 0.0 0.0 0.00 3.16 F
2093 2097 0.036671 TCAGACATGCTGGCACTCAG 60.037 55.0 14.5 0.0 44.98 3.35 F
2760 2764 0.037326 TAAGTCTGCTCCGCCAAGTG 60.037 55.0 0.0 0.0 0.00 3.16 F
3299 3327 0.251634 GAACTCTCCAAGCCTCCCAG 59.748 60.0 0.0 0.0 0.00 4.45 F
4685 4718 0.454452 GGACGCATTTTCCACTTCGC 60.454 55.0 0.0 0.0 32.82 4.70 F
5223 5256 2.549064 TGGCGGTAATGATGGATCTG 57.451 50.0 0.0 0.0 0.00 2.90 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1519 1523 1.153489 GCTCATCAGCTGCCTCGAA 60.153 57.895 9.47 0.00 43.09 3.71 R
2530 2534 0.984230 AGGATCAACTCTTTCCGCCA 59.016 50.000 0.00 0.00 34.61 5.69 R
3347 3375 1.201921 GCGATGTCCTTTAACACTGCG 60.202 52.381 0.00 0.00 30.55 5.18 R
4049 4082 1.448540 CGCTCATGGTGGACTGTCC 60.449 63.158 19.96 19.96 36.96 4.02 R
4961 4994 1.194781 GGGGCCAGACTCTCACAGAA 61.195 60.000 4.39 0.00 0.00 3.02 R
5515 5548 1.346395 TGGCAACGACATGAGTAACCT 59.654 47.619 0.00 0.00 42.51 3.50 R
6717 6769 0.034089 CCAAAGTAGGCCTTGGGAGG 60.034 60.000 12.58 4.48 46.12 4.30 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 8.511604 ACCACTATTATTTCAACTGATTCCAG 57.488 34.615 0.00 0.00 45.76 3.86
26 27 7.067494 ACCACTATTATTTCAACTGATTCCAGC 59.933 37.037 0.00 0.00 44.16 4.85
27 28 7.128331 CACTATTATTTCAACTGATTCCAGCG 58.872 38.462 0.00 0.00 44.16 5.18
28 29 7.011389 CACTATTATTTCAACTGATTCCAGCGA 59.989 37.037 0.00 0.00 44.16 4.93
29 30 5.545658 TTATTTCAACTGATTCCAGCGAC 57.454 39.130 0.00 0.00 44.16 5.19
30 31 2.542020 TTCAACTGATTCCAGCGACA 57.458 45.000 0.00 0.00 44.16 4.35
31 32 2.084610 TCAACTGATTCCAGCGACAG 57.915 50.000 0.00 0.00 44.16 3.51
32 33 1.344438 TCAACTGATTCCAGCGACAGT 59.656 47.619 0.00 0.00 44.16 3.55
33 34 1.462283 CAACTGATTCCAGCGACAGTG 59.538 52.381 0.00 0.00 44.16 3.66
34 35 0.671781 ACTGATTCCAGCGACAGTGC 60.672 55.000 0.00 0.00 44.16 4.40
36 37 0.035317 TGATTCCAGCGACAGTGCTT 59.965 50.000 0.00 0.00 44.46 3.91
37 38 0.723981 GATTCCAGCGACAGTGCTTC 59.276 55.000 0.00 0.00 44.46 3.86
38 39 0.322975 ATTCCAGCGACAGTGCTTCT 59.677 50.000 0.00 0.00 44.46 2.85
39 40 0.966179 TTCCAGCGACAGTGCTTCTA 59.034 50.000 0.00 0.00 44.46 2.10
40 41 0.966179 TCCAGCGACAGTGCTTCTAA 59.034 50.000 0.00 0.00 44.46 2.10
41 42 1.071605 CCAGCGACAGTGCTTCTAAC 58.928 55.000 0.00 0.00 44.46 2.34
42 43 0.710567 CAGCGACAGTGCTTCTAACG 59.289 55.000 0.00 0.00 44.46 3.18
43 44 0.388649 AGCGACAGTGCTTCTAACGG 60.389 55.000 0.00 0.00 44.46 4.44
44 45 0.666577 GCGACAGTGCTTCTAACGGT 60.667 55.000 0.00 0.00 0.00 4.83
45 46 1.779569 CGACAGTGCTTCTAACGGTT 58.220 50.000 0.00 0.00 0.00 4.44
46 47 1.455786 CGACAGTGCTTCTAACGGTTG 59.544 52.381 3.07 0.00 0.00 3.77
47 48 1.798813 GACAGTGCTTCTAACGGTTGG 59.201 52.381 3.07 0.00 0.00 3.77
48 49 1.414919 ACAGTGCTTCTAACGGTTGGA 59.585 47.619 2.52 2.52 0.00 3.53
49 50 2.038557 ACAGTGCTTCTAACGGTTGGAT 59.961 45.455 7.79 0.00 0.00 3.41
50 51 2.416547 CAGTGCTTCTAACGGTTGGATG 59.583 50.000 7.79 11.08 0.00 3.51
51 52 2.038557 AGTGCTTCTAACGGTTGGATGT 59.961 45.455 17.28 0.77 0.00 3.06
52 53 2.812011 GTGCTTCTAACGGTTGGATGTT 59.188 45.455 17.28 0.00 0.00 2.71
53 54 3.252458 GTGCTTCTAACGGTTGGATGTTT 59.748 43.478 17.28 0.00 0.00 2.83
54 55 4.453136 GTGCTTCTAACGGTTGGATGTTTA 59.547 41.667 17.28 6.11 0.00 2.01
55 56 4.453136 TGCTTCTAACGGTTGGATGTTTAC 59.547 41.667 17.28 5.66 0.00 2.01
56 57 4.142752 GCTTCTAACGGTTGGATGTTTACC 60.143 45.833 17.28 0.00 0.00 2.85
57 58 4.895668 TCTAACGGTTGGATGTTTACCT 57.104 40.909 2.52 0.00 0.00 3.08
58 59 5.231702 TCTAACGGTTGGATGTTTACCTT 57.768 39.130 2.52 0.00 0.00 3.50
59 60 5.623169 TCTAACGGTTGGATGTTTACCTTT 58.377 37.500 2.52 0.00 0.00 3.11
60 61 6.063404 TCTAACGGTTGGATGTTTACCTTTT 58.937 36.000 2.52 0.00 0.00 2.27
61 62 7.222872 TCTAACGGTTGGATGTTTACCTTTTA 58.777 34.615 2.52 0.00 0.00 1.52
62 63 6.904463 AACGGTTGGATGTTTACCTTTTAT 57.096 33.333 0.00 0.00 0.00 1.40
63 64 6.904463 ACGGTTGGATGTTTACCTTTTATT 57.096 33.333 0.00 0.00 0.00 1.40
64 65 7.292713 ACGGTTGGATGTTTACCTTTTATTT 57.707 32.000 0.00 0.00 0.00 1.40
65 66 7.728148 ACGGTTGGATGTTTACCTTTTATTTT 58.272 30.769 0.00 0.00 0.00 1.82
66 67 8.205512 ACGGTTGGATGTTTACCTTTTATTTTT 58.794 29.630 0.00 0.00 0.00 1.94
67 68 9.694137 CGGTTGGATGTTTACCTTTTATTTTTA 57.306 29.630 0.00 0.00 0.00 1.52
89 90 9.828852 TTTTATTATTTTCTGTTATTCACGCGT 57.171 25.926 5.58 5.58 0.00 6.01
90 91 9.480538 TTTATTATTTTCTGTTATTCACGCGTC 57.519 29.630 9.86 0.00 0.00 5.19
91 92 3.799137 TTTTCTGTTATTCACGCGTCC 57.201 42.857 9.86 0.00 0.00 4.79
92 93 2.736144 TTCTGTTATTCACGCGTCCT 57.264 45.000 9.86 0.00 0.00 3.85
93 94 1.990799 TCTGTTATTCACGCGTCCTG 58.009 50.000 9.86 0.00 0.00 3.86
94 95 1.271379 TCTGTTATTCACGCGTCCTGT 59.729 47.619 9.86 0.00 0.00 4.00
95 96 2.066262 CTGTTATTCACGCGTCCTGTT 58.934 47.619 9.86 0.00 0.00 3.16
96 97 2.478894 CTGTTATTCACGCGTCCTGTTT 59.521 45.455 9.86 0.00 0.00 2.83
97 98 2.477375 TGTTATTCACGCGTCCTGTTTC 59.523 45.455 9.86 0.00 0.00 2.78
98 99 1.342555 TATTCACGCGTCCTGTTTCG 58.657 50.000 9.86 0.00 0.00 3.46
99 100 0.599204 ATTCACGCGTCCTGTTTCGT 60.599 50.000 9.86 0.00 35.35 3.85
100 101 1.210545 TTCACGCGTCCTGTTTCGTC 61.211 55.000 9.86 0.00 32.38 4.20
101 102 2.355481 ACGCGTCCTGTTTCGTCC 60.355 61.111 5.58 0.00 0.00 4.79
102 103 3.110178 CGCGTCCTGTTTCGTCCC 61.110 66.667 0.00 0.00 0.00 4.46
103 104 3.110178 GCGTCCTGTTTCGTCCCG 61.110 66.667 0.00 0.00 0.00 5.14
104 105 3.110178 CGTCCTGTTTCGTCCCGC 61.110 66.667 0.00 0.00 0.00 6.13
105 106 2.029964 GTCCTGTTTCGTCCCGCA 59.970 61.111 0.00 0.00 0.00 5.69
106 107 2.029964 TCCTGTTTCGTCCCGCAC 59.970 61.111 0.00 0.00 0.00 5.34
114 115 4.728102 CGTCCCGCACGCCAACTA 62.728 66.667 0.00 0.00 42.87 2.24
115 116 2.813908 GTCCCGCACGCCAACTAG 60.814 66.667 0.00 0.00 0.00 2.57
116 117 4.077184 TCCCGCACGCCAACTAGG 62.077 66.667 0.00 0.00 41.84 3.02
124 125 3.097162 GCCAACTAGGGGAGGGGG 61.097 72.222 6.88 0.00 38.09 5.40
139 140 2.282603 GGGGTGGGCGCAGTTTTA 60.283 61.111 10.83 0.00 0.00 1.52
140 141 2.632544 GGGGTGGGCGCAGTTTTAC 61.633 63.158 10.83 0.00 0.00 2.01
141 142 2.632544 GGGTGGGCGCAGTTTTACC 61.633 63.158 10.83 7.55 0.00 2.85
142 143 1.899534 GGTGGGCGCAGTTTTACCA 60.900 57.895 10.83 1.64 0.00 3.25
143 144 1.248101 GGTGGGCGCAGTTTTACCAT 61.248 55.000 10.83 0.00 33.19 3.55
144 145 0.170339 GTGGGCGCAGTTTTACCATC 59.830 55.000 10.83 0.00 33.19 3.51
145 146 0.037590 TGGGCGCAGTTTTACCATCT 59.962 50.000 10.83 0.00 0.00 2.90
146 147 0.733150 GGGCGCAGTTTTACCATCTC 59.267 55.000 10.83 0.00 0.00 2.75
147 148 1.679032 GGGCGCAGTTTTACCATCTCT 60.679 52.381 10.83 0.00 0.00 3.10
148 149 1.666189 GGCGCAGTTTTACCATCTCTC 59.334 52.381 10.83 0.00 0.00 3.20
149 150 1.666189 GCGCAGTTTTACCATCTCTCC 59.334 52.381 0.30 0.00 0.00 3.71
150 151 2.280628 CGCAGTTTTACCATCTCTCCC 58.719 52.381 0.00 0.00 0.00 4.30
151 152 2.280628 GCAGTTTTACCATCTCTCCCG 58.719 52.381 0.00 0.00 0.00 5.14
152 153 2.280628 CAGTTTTACCATCTCTCCCGC 58.719 52.381 0.00 0.00 0.00 6.13
153 154 1.209747 AGTTTTACCATCTCTCCCGCC 59.790 52.381 0.00 0.00 0.00 6.13
154 155 0.177141 TTTTACCATCTCTCCCGCCG 59.823 55.000 0.00 0.00 0.00 6.46
155 156 2.306255 TTTACCATCTCTCCCGCCGC 62.306 60.000 0.00 0.00 0.00 6.53
156 157 3.733507 TACCATCTCTCCCGCCGCT 62.734 63.158 0.00 0.00 0.00 5.52
157 158 4.292178 CCATCTCTCCCGCCGCTC 62.292 72.222 0.00 0.00 0.00 5.03
158 159 3.222855 CATCTCTCCCGCCGCTCT 61.223 66.667 0.00 0.00 0.00 4.09
159 160 3.222855 ATCTCTCCCGCCGCTCTG 61.223 66.667 0.00 0.00 0.00 3.35
160 161 3.723097 ATCTCTCCCGCCGCTCTGA 62.723 63.158 0.00 0.00 0.00 3.27
161 162 3.452786 CTCTCCCGCCGCTCTGAA 61.453 66.667 0.00 0.00 0.00 3.02
162 163 2.759973 TCTCCCGCCGCTCTGAAT 60.760 61.111 0.00 0.00 0.00 2.57
163 164 2.587194 CTCCCGCCGCTCTGAATG 60.587 66.667 0.00 0.00 0.00 2.67
164 165 4.838152 TCCCGCCGCTCTGAATGC 62.838 66.667 0.00 0.00 0.00 3.56
167 168 4.845580 CGCCGCTCTGAATGCCCT 62.846 66.667 0.00 0.00 0.00 5.19
168 169 2.505982 GCCGCTCTGAATGCCCTA 59.494 61.111 0.00 0.00 0.00 3.53
169 170 1.153168 GCCGCTCTGAATGCCCTAA 60.153 57.895 0.00 0.00 0.00 2.69
170 171 0.536006 GCCGCTCTGAATGCCCTAAT 60.536 55.000 0.00 0.00 0.00 1.73
171 172 1.517242 CCGCTCTGAATGCCCTAATC 58.483 55.000 0.00 0.00 0.00 1.75
172 173 1.517242 CGCTCTGAATGCCCTAATCC 58.483 55.000 0.00 0.00 0.00 3.01
173 174 1.071385 CGCTCTGAATGCCCTAATCCT 59.929 52.381 0.00 0.00 0.00 3.24
174 175 2.502295 GCTCTGAATGCCCTAATCCTG 58.498 52.381 0.00 0.00 0.00 3.86
175 176 2.105477 GCTCTGAATGCCCTAATCCTGA 59.895 50.000 0.00 0.00 0.00 3.86
176 177 3.244840 GCTCTGAATGCCCTAATCCTGAT 60.245 47.826 0.00 0.00 0.00 2.90
177 178 4.577875 CTCTGAATGCCCTAATCCTGATC 58.422 47.826 0.00 0.00 0.00 2.92
178 179 3.328931 TCTGAATGCCCTAATCCTGATCC 59.671 47.826 0.00 0.00 0.00 3.36
179 180 2.376518 TGAATGCCCTAATCCTGATCCC 59.623 50.000 0.00 0.00 0.00 3.85
180 181 2.138535 ATGCCCTAATCCTGATCCCA 57.861 50.000 0.00 0.00 0.00 4.37
181 182 1.905839 TGCCCTAATCCTGATCCCAA 58.094 50.000 0.00 0.00 0.00 4.12
182 183 2.213310 TGCCCTAATCCTGATCCCAAA 58.787 47.619 0.00 0.00 0.00 3.28
183 184 2.091885 TGCCCTAATCCTGATCCCAAAC 60.092 50.000 0.00 0.00 0.00 2.93
184 185 2.851195 CCCTAATCCTGATCCCAAACG 58.149 52.381 0.00 0.00 0.00 3.60
185 186 2.438021 CCCTAATCCTGATCCCAAACGA 59.562 50.000 0.00 0.00 0.00 3.85
186 187 3.495100 CCCTAATCCTGATCCCAAACGAG 60.495 52.174 0.00 0.00 0.00 4.18
187 188 2.717639 AATCCTGATCCCAAACGAGG 57.282 50.000 0.00 0.00 0.00 4.63
188 189 0.181350 ATCCTGATCCCAAACGAGGC 59.819 55.000 0.00 0.00 0.00 4.70
189 190 1.452108 CCTGATCCCAAACGAGGCC 60.452 63.158 0.00 0.00 0.00 5.19
190 191 1.452108 CTGATCCCAAACGAGGCCC 60.452 63.158 0.00 0.00 0.00 5.80
191 192 2.513897 GATCCCAAACGAGGCCCG 60.514 66.667 11.48 11.48 45.44 6.13
192 193 3.006728 ATCCCAAACGAGGCCCGA 61.007 61.111 18.74 0.00 41.76 5.14
193 194 2.325393 GATCCCAAACGAGGCCCGAT 62.325 60.000 18.74 5.67 41.76 4.18
194 195 2.608970 ATCCCAAACGAGGCCCGATG 62.609 60.000 18.74 15.41 41.76 3.84
195 196 2.267642 CCAAACGAGGCCCGATGA 59.732 61.111 18.74 0.00 41.76 2.92
196 197 1.153168 CCAAACGAGGCCCGATGAT 60.153 57.895 18.74 0.00 41.76 2.45
197 198 1.439353 CCAAACGAGGCCCGATGATG 61.439 60.000 18.74 11.24 41.76 3.07
198 199 0.744414 CAAACGAGGCCCGATGATGT 60.744 55.000 18.74 0.00 41.76 3.06
199 200 0.462047 AAACGAGGCCCGATGATGTC 60.462 55.000 18.74 0.00 41.76 3.06
200 201 1.330655 AACGAGGCCCGATGATGTCT 61.331 55.000 18.74 0.00 41.76 3.41
201 202 0.467474 ACGAGGCCCGATGATGTCTA 60.467 55.000 18.74 0.00 41.76 2.59
202 203 0.242286 CGAGGCCCGATGATGTCTAG 59.758 60.000 0.00 0.00 41.76 2.43
203 204 0.605589 GAGGCCCGATGATGTCTAGG 59.394 60.000 0.00 0.00 0.00 3.02
204 205 0.833834 AGGCCCGATGATGTCTAGGG 60.834 60.000 0.00 0.00 44.72 3.53
205 206 0.832135 GGCCCGATGATGTCTAGGGA 60.832 60.000 2.59 0.00 44.70 4.20
206 207 1.048601 GCCCGATGATGTCTAGGGAA 58.951 55.000 2.59 0.00 44.70 3.97
207 208 1.001406 GCCCGATGATGTCTAGGGAAG 59.999 57.143 2.59 0.00 44.70 3.46
208 209 2.320781 CCCGATGATGTCTAGGGAAGT 58.679 52.381 0.00 0.00 44.70 3.01
209 210 2.036475 CCCGATGATGTCTAGGGAAGTG 59.964 54.545 0.00 0.00 44.70 3.16
210 211 2.036475 CCGATGATGTCTAGGGAAGTGG 59.964 54.545 0.00 0.00 0.00 4.00
211 212 2.546795 CGATGATGTCTAGGGAAGTGGC 60.547 54.545 0.00 0.00 0.00 5.01
212 213 1.204146 TGATGTCTAGGGAAGTGGCC 58.796 55.000 0.00 0.00 0.00 5.36
213 214 1.204146 GATGTCTAGGGAAGTGGCCA 58.796 55.000 0.00 0.00 0.00 5.36
214 215 1.771255 GATGTCTAGGGAAGTGGCCAT 59.229 52.381 9.72 0.00 0.00 4.40
215 216 0.911769 TGTCTAGGGAAGTGGCCATG 59.088 55.000 9.72 0.00 0.00 3.66
216 217 0.912486 GTCTAGGGAAGTGGCCATGT 59.088 55.000 9.72 0.00 0.00 3.21
217 218 1.282157 GTCTAGGGAAGTGGCCATGTT 59.718 52.381 9.72 5.72 0.00 2.71
218 219 1.281867 TCTAGGGAAGTGGCCATGTTG 59.718 52.381 9.72 0.00 0.00 3.33
219 220 0.331278 TAGGGAAGTGGCCATGTTGG 59.669 55.000 9.72 0.00 41.55 3.77
220 221 1.076549 GGGAAGTGGCCATGTTGGA 59.923 57.895 9.72 0.00 40.96 3.53
221 222 0.967380 GGGAAGTGGCCATGTTGGAG 60.967 60.000 9.72 0.00 40.96 3.86
222 223 0.251341 GGAAGTGGCCATGTTGGAGT 60.251 55.000 9.72 0.00 40.96 3.85
223 224 0.883833 GAAGTGGCCATGTTGGAGTG 59.116 55.000 9.72 0.00 40.96 3.51
224 225 0.540365 AAGTGGCCATGTTGGAGTGG 60.540 55.000 9.72 0.00 40.96 4.00
225 226 1.978617 GTGGCCATGTTGGAGTGGG 60.979 63.158 9.72 0.00 40.96 4.61
226 227 2.362889 GGCCATGTTGGAGTGGGG 60.363 66.667 0.00 0.00 40.96 4.96
227 228 2.362889 GCCATGTTGGAGTGGGGG 60.363 66.667 0.00 0.00 40.96 5.40
228 229 3.180282 CCATGTTGGAGTGGGGGT 58.820 61.111 0.00 0.00 40.96 4.95
229 230 1.304381 CCATGTTGGAGTGGGGGTG 60.304 63.158 0.00 0.00 40.96 4.61
230 231 1.460255 CATGTTGGAGTGGGGGTGT 59.540 57.895 0.00 0.00 0.00 4.16
231 232 0.895100 CATGTTGGAGTGGGGGTGTG 60.895 60.000 0.00 0.00 0.00 3.82
232 233 2.597510 GTTGGAGTGGGGGTGTGC 60.598 66.667 0.00 0.00 0.00 4.57
233 234 2.776526 TTGGAGTGGGGGTGTGCT 60.777 61.111 0.00 0.00 0.00 4.40
234 235 2.829384 TTGGAGTGGGGGTGTGCTC 61.829 63.158 0.00 0.00 0.00 4.26
235 236 4.035102 GGAGTGGGGGTGTGCTCC 62.035 72.222 0.00 0.00 40.39 4.70
236 237 2.930562 GAGTGGGGGTGTGCTCCT 60.931 66.667 0.00 0.00 34.96 3.69
237 238 1.612442 GAGTGGGGGTGTGCTCCTA 60.612 63.158 0.00 0.00 34.96 2.94
238 239 1.900545 GAGTGGGGGTGTGCTCCTAC 61.901 65.000 0.00 0.00 46.03 3.18
239 240 1.918800 GTGGGGGTGTGCTCCTACT 60.919 63.158 0.00 0.00 42.78 2.57
240 241 1.918293 TGGGGGTGTGCTCCTACTG 60.918 63.158 0.00 0.00 34.96 2.74
241 242 1.918800 GGGGGTGTGCTCCTACTGT 60.919 63.158 0.00 0.00 34.96 3.55
242 243 1.489560 GGGGGTGTGCTCCTACTGTT 61.490 60.000 0.00 0.00 34.96 3.16
243 244 0.321653 GGGGTGTGCTCCTACTGTTG 60.322 60.000 0.00 0.00 30.72 3.33
244 245 0.321653 GGGTGTGCTCCTACTGTTGG 60.322 60.000 1.58 1.58 0.00 3.77
245 246 0.396811 GGTGTGCTCCTACTGTTGGT 59.603 55.000 8.11 0.00 0.00 3.67
246 247 1.512926 GTGTGCTCCTACTGTTGGTG 58.487 55.000 8.11 7.03 0.00 4.17
247 248 0.396435 TGTGCTCCTACTGTTGGTGG 59.604 55.000 8.11 4.39 0.00 4.61
248 249 0.955919 GTGCTCCTACTGTTGGTGGC 60.956 60.000 16.23 16.23 0.00 5.01
249 250 1.374947 GCTCCTACTGTTGGTGGCA 59.625 57.895 17.37 0.00 0.00 4.92
250 251 0.250727 GCTCCTACTGTTGGTGGCAA 60.251 55.000 17.37 0.00 0.00 4.52
251 252 1.523758 CTCCTACTGTTGGTGGCAAC 58.476 55.000 8.11 0.00 35.75 4.17
252 253 0.250124 TCCTACTGTTGGTGGCAACG 60.250 55.000 8.11 0.00 37.86 4.10
253 254 0.534203 CCTACTGTTGGTGGCAACGT 60.534 55.000 0.00 0.00 37.86 3.99
254 255 0.586319 CTACTGTTGGTGGCAACGTG 59.414 55.000 0.00 0.00 37.86 4.49
255 256 0.107606 TACTGTTGGTGGCAACGTGT 60.108 50.000 0.00 0.00 37.86 4.49
256 257 1.355210 CTGTTGGTGGCAACGTGTC 59.645 57.895 0.00 0.00 37.86 3.67
257 258 1.372838 CTGTTGGTGGCAACGTGTCA 61.373 55.000 0.00 0.00 37.86 3.58
258 259 0.960861 TGTTGGTGGCAACGTGTCAA 60.961 50.000 0.00 0.00 31.67 3.18
259 260 0.524604 GTTGGTGGCAACGTGTCAAC 60.525 55.000 0.00 0.00 40.77 3.18
260 261 3.503749 GGTGGCAACGTGTCAACA 58.496 55.556 3.28 0.00 39.96 3.33
261 262 1.803943 GGTGGCAACGTGTCAACAA 59.196 52.632 3.28 0.00 39.96 2.83
262 263 0.171455 GGTGGCAACGTGTCAACAAA 59.829 50.000 3.28 0.00 39.96 2.83
263 264 1.402984 GGTGGCAACGTGTCAACAAAA 60.403 47.619 3.28 0.00 39.96 2.44
264 265 1.917303 GTGGCAACGTGTCAACAAAAG 59.083 47.619 0.00 0.00 31.67 2.27
265 266 1.813178 TGGCAACGTGTCAACAAAAGA 59.187 42.857 0.00 0.00 42.51 2.52
266 267 2.159448 TGGCAACGTGTCAACAAAAGAG 60.159 45.455 0.00 0.00 42.51 2.85
267 268 1.846175 GCAACGTGTCAACAAAAGAGC 59.154 47.619 0.00 0.00 0.00 4.09
268 269 2.730715 GCAACGTGTCAACAAAAGAGCA 60.731 45.455 0.00 0.00 0.00 4.26
269 270 2.825086 ACGTGTCAACAAAAGAGCAC 57.175 45.000 0.00 0.00 0.00 4.40
270 271 1.400494 ACGTGTCAACAAAAGAGCACC 59.600 47.619 0.00 0.00 0.00 5.01
271 272 1.400142 CGTGTCAACAAAAGAGCACCA 59.600 47.619 0.00 0.00 0.00 4.17
272 273 2.033299 CGTGTCAACAAAAGAGCACCAT 59.967 45.455 0.00 0.00 0.00 3.55
273 274 3.374745 GTGTCAACAAAAGAGCACCATG 58.625 45.455 0.00 0.00 0.00 3.66
274 275 2.223782 TGTCAACAAAAGAGCACCATGC 60.224 45.455 0.00 0.00 45.46 4.06
290 291 6.992766 GCACCATGCATTGTAAAATCTTTAC 58.007 36.000 2.64 2.93 44.26 2.01
291 292 6.035975 GCACCATGCATTGTAAAATCTTTACC 59.964 38.462 2.64 0.00 44.26 2.85
292 293 7.322664 CACCATGCATTGTAAAATCTTTACCT 58.677 34.615 2.64 0.00 0.00 3.08
293 294 7.818930 CACCATGCATTGTAAAATCTTTACCTT 59.181 33.333 2.64 0.00 0.00 3.50
294 295 8.034804 ACCATGCATTGTAAAATCTTTACCTTC 58.965 33.333 0.69 0.00 0.00 3.46
295 296 8.253113 CCATGCATTGTAAAATCTTTACCTTCT 58.747 33.333 0.00 0.00 0.00 2.85
298 299 8.458843 TGCATTGTAAAATCTTTACCTTCTAGC 58.541 33.333 6.79 0.00 0.00 3.42
299 300 7.915923 GCATTGTAAAATCTTTACCTTCTAGCC 59.084 37.037 6.79 0.00 0.00 3.93
300 301 8.956426 CATTGTAAAATCTTTACCTTCTAGCCA 58.044 33.333 6.79 0.00 0.00 4.75
301 302 9.700831 ATTGTAAAATCTTTACCTTCTAGCCAT 57.299 29.630 6.79 0.00 0.00 4.40
302 303 8.732746 TGTAAAATCTTTACCTTCTAGCCATC 57.267 34.615 6.79 0.00 0.00 3.51
303 304 8.325787 TGTAAAATCTTTACCTTCTAGCCATCA 58.674 33.333 6.79 0.00 0.00 3.07
304 305 9.343539 GTAAAATCTTTACCTTCTAGCCATCAT 57.656 33.333 0.00 0.00 0.00 2.45
310 311 9.920946 TCTTTACCTTCTAGCCATCATATTTTT 57.079 29.630 0.00 0.00 0.00 1.94
311 312 9.956720 CTTTACCTTCTAGCCATCATATTTTTG 57.043 33.333 0.00 0.00 0.00 2.44
312 313 9.693739 TTTACCTTCTAGCCATCATATTTTTGA 57.306 29.630 0.00 0.00 0.00 2.69
313 314 9.693739 TTACCTTCTAGCCATCATATTTTTGAA 57.306 29.630 0.00 0.00 0.00 2.69
314 315 8.230472 ACCTTCTAGCCATCATATTTTTGAAG 57.770 34.615 0.00 0.00 0.00 3.02
315 316 7.836183 ACCTTCTAGCCATCATATTTTTGAAGT 59.164 33.333 0.00 0.00 0.00 3.01
316 317 8.133627 CCTTCTAGCCATCATATTTTTGAAGTG 58.866 37.037 0.00 0.00 0.00 3.16
317 318 7.572523 TCTAGCCATCATATTTTTGAAGTGG 57.427 36.000 0.00 0.00 31.63 4.00
318 319 5.603170 AGCCATCATATTTTTGAAGTGGG 57.397 39.130 0.00 0.00 29.94 4.61
319 320 5.271598 AGCCATCATATTTTTGAAGTGGGA 58.728 37.500 0.00 0.00 29.94 4.37
320 321 5.721000 AGCCATCATATTTTTGAAGTGGGAA 59.279 36.000 0.00 0.00 29.94 3.97
321 322 6.213195 AGCCATCATATTTTTGAAGTGGGAAA 59.787 34.615 0.00 0.00 29.94 3.13
322 323 6.536224 GCCATCATATTTTTGAAGTGGGAAAG 59.464 38.462 0.00 0.00 29.94 2.62
323 324 7.614494 CCATCATATTTTTGAAGTGGGAAAGT 58.386 34.615 0.00 0.00 0.00 2.66
324 325 8.096414 CCATCATATTTTTGAAGTGGGAAAGTT 58.904 33.333 0.00 0.00 0.00 2.66
325 326 9.492973 CATCATATTTTTGAAGTGGGAAAGTTT 57.507 29.630 0.00 0.00 0.00 2.66
359 360 9.813826 AATTAATGTTAATAGGGATTCTGGAGG 57.186 33.333 0.00 0.00 33.25 4.30
360 361 8.575736 TTAATGTTAATAGGGATTCTGGAGGA 57.424 34.615 0.00 0.00 0.00 3.71
361 362 6.694445 ATGTTAATAGGGATTCTGGAGGAG 57.306 41.667 0.00 0.00 0.00 3.69
362 363 5.788430 TGTTAATAGGGATTCTGGAGGAGA 58.212 41.667 0.00 0.00 0.00 3.71
363 364 5.841237 TGTTAATAGGGATTCTGGAGGAGAG 59.159 44.000 0.00 0.00 30.18 3.20
364 365 4.841813 AATAGGGATTCTGGAGGAGAGA 57.158 45.455 0.00 0.00 30.18 3.10
365 366 4.841813 ATAGGGATTCTGGAGGAGAGAA 57.158 45.455 0.00 0.00 34.00 2.87
366 367 3.498614 AGGGATTCTGGAGGAGAGAAA 57.501 47.619 0.00 0.00 33.22 2.52
367 368 3.383223 AGGGATTCTGGAGGAGAGAAAG 58.617 50.000 0.00 0.00 33.22 2.62
368 369 3.013417 AGGGATTCTGGAGGAGAGAAAGA 59.987 47.826 0.00 0.00 33.22 2.52
369 370 3.387699 GGGATTCTGGAGGAGAGAAAGAG 59.612 52.174 0.00 0.00 33.22 2.85
370 371 3.387699 GGATTCTGGAGGAGAGAAAGAGG 59.612 52.174 0.00 0.00 33.22 3.69
371 372 3.835478 TTCTGGAGGAGAGAAAGAGGA 57.165 47.619 0.00 0.00 30.18 3.71
372 373 3.094484 TCTGGAGGAGAGAAAGAGGAC 57.906 52.381 0.00 0.00 0.00 3.85
373 374 2.380249 TCTGGAGGAGAGAAAGAGGACA 59.620 50.000 0.00 0.00 0.00 4.02
374 375 2.495669 CTGGAGGAGAGAAAGAGGACAC 59.504 54.545 0.00 0.00 0.00 3.67
375 376 2.110899 TGGAGGAGAGAAAGAGGACACT 59.889 50.000 0.00 0.00 0.00 3.55
376 377 3.333980 TGGAGGAGAGAAAGAGGACACTA 59.666 47.826 0.00 0.00 0.00 2.74
377 378 3.951680 GGAGGAGAGAAAGAGGACACTAG 59.048 52.174 0.00 0.00 0.00 2.57
378 379 3.951680 GAGGAGAGAAAGAGGACACTAGG 59.048 52.174 0.00 0.00 0.00 3.02
379 380 3.028130 GGAGAGAAAGAGGACACTAGGG 58.972 54.545 0.00 0.00 0.00 3.53
380 381 2.429250 GAGAGAAAGAGGACACTAGGGC 59.571 54.545 0.00 0.00 0.00 5.19
381 382 2.180276 GAGAAAGAGGACACTAGGGCA 58.820 52.381 0.00 0.00 0.00 5.36
382 383 2.567615 GAGAAAGAGGACACTAGGGCAA 59.432 50.000 0.00 0.00 0.00 4.52
383 384 2.569404 AGAAAGAGGACACTAGGGCAAG 59.431 50.000 0.00 0.00 0.00 4.01
384 385 2.327325 AAGAGGACACTAGGGCAAGA 57.673 50.000 0.00 0.00 0.00 3.02
385 386 1.562783 AGAGGACACTAGGGCAAGAC 58.437 55.000 0.00 0.00 0.00 3.01
386 387 1.203187 AGAGGACACTAGGGCAAGACA 60.203 52.381 0.00 0.00 0.00 3.41
387 388 1.623811 GAGGACACTAGGGCAAGACAA 59.376 52.381 0.00 0.00 0.00 3.18
388 389 2.038557 GAGGACACTAGGGCAAGACAAA 59.961 50.000 0.00 0.00 0.00 2.83
389 390 2.152016 GGACACTAGGGCAAGACAAAC 58.848 52.381 0.00 0.00 0.00 2.93
390 391 1.798813 GACACTAGGGCAAGACAAACG 59.201 52.381 0.00 0.00 0.00 3.60
391 392 1.156736 CACTAGGGCAAGACAAACGG 58.843 55.000 0.00 0.00 0.00 4.44
392 393 1.053424 ACTAGGGCAAGACAAACGGA 58.947 50.000 0.00 0.00 0.00 4.69
393 394 1.418637 ACTAGGGCAAGACAAACGGAA 59.581 47.619 0.00 0.00 0.00 4.30
394 395 2.158726 ACTAGGGCAAGACAAACGGAAA 60.159 45.455 0.00 0.00 0.00 3.13
395 396 1.995376 AGGGCAAGACAAACGGAAAT 58.005 45.000 0.00 0.00 0.00 2.17
396 397 3.149005 AGGGCAAGACAAACGGAAATA 57.851 42.857 0.00 0.00 0.00 1.40
397 398 3.492337 AGGGCAAGACAAACGGAAATAA 58.508 40.909 0.00 0.00 0.00 1.40
398 399 3.506067 AGGGCAAGACAAACGGAAATAAG 59.494 43.478 0.00 0.00 0.00 1.73
399 400 3.254903 GGGCAAGACAAACGGAAATAAGT 59.745 43.478 0.00 0.00 0.00 2.24
400 401 4.226761 GGCAAGACAAACGGAAATAAGTG 58.773 43.478 0.00 0.00 0.00 3.16
401 402 4.226761 GCAAGACAAACGGAAATAAGTGG 58.773 43.478 0.00 0.00 0.00 4.00
402 403 4.023536 GCAAGACAAACGGAAATAAGTGGA 60.024 41.667 0.00 0.00 0.00 4.02
403 404 5.449304 CAAGACAAACGGAAATAAGTGGAC 58.551 41.667 0.00 0.00 0.00 4.02
404 405 4.070009 AGACAAACGGAAATAAGTGGACC 58.930 43.478 0.00 0.00 0.00 4.46
405 406 3.151554 ACAAACGGAAATAAGTGGACCC 58.848 45.455 0.00 0.00 0.00 4.46
406 407 3.150767 CAAACGGAAATAAGTGGACCCA 58.849 45.455 0.00 0.00 0.00 4.51
407 408 3.732048 AACGGAAATAAGTGGACCCAT 57.268 42.857 0.00 0.00 0.00 4.00
408 409 2.999331 ACGGAAATAAGTGGACCCATG 58.001 47.619 0.00 0.00 0.00 3.66
409 410 2.297701 CGGAAATAAGTGGACCCATGG 58.702 52.381 4.14 4.14 0.00 3.66
410 411 2.666317 GGAAATAAGTGGACCCATGGG 58.334 52.381 30.23 30.23 42.03 4.00
411 412 2.243736 GGAAATAAGTGGACCCATGGGA 59.756 50.000 38.07 12.87 38.96 4.37
412 413 3.309556 GGAAATAAGTGGACCCATGGGAA 60.310 47.826 38.07 18.98 38.96 3.97
413 414 3.382083 AATAAGTGGACCCATGGGAAC 57.618 47.619 38.07 28.08 38.96 3.62
414 415 0.616371 TAAGTGGACCCATGGGAACG 59.384 55.000 38.07 11.29 38.96 3.95
415 416 1.131303 AAGTGGACCCATGGGAACGA 61.131 55.000 38.07 22.86 38.96 3.85
416 417 1.131303 AGTGGACCCATGGGAACGAA 61.131 55.000 38.07 17.68 38.96 3.85
417 418 0.250989 GTGGACCCATGGGAACGAAA 60.251 55.000 38.07 13.04 38.96 3.46
418 419 0.478942 TGGACCCATGGGAACGAAAA 59.521 50.000 38.07 11.95 38.96 2.29
419 420 1.076350 TGGACCCATGGGAACGAAAAT 59.924 47.619 38.07 12.42 38.96 1.82
420 421 2.309162 TGGACCCATGGGAACGAAAATA 59.691 45.455 38.07 9.08 38.96 1.40
421 422 3.245300 TGGACCCATGGGAACGAAAATAA 60.245 43.478 38.07 8.38 38.96 1.40
422 423 3.764972 GGACCCATGGGAACGAAAATAAA 59.235 43.478 38.07 0.00 38.96 1.40
423 424 4.404394 GGACCCATGGGAACGAAAATAAAT 59.596 41.667 38.07 9.87 38.96 1.40
424 425 5.337578 ACCCATGGGAACGAAAATAAATG 57.662 39.130 38.07 4.79 38.96 2.32
425 426 4.161377 ACCCATGGGAACGAAAATAAATGG 59.839 41.667 38.07 4.37 38.96 3.16
426 427 4.404073 CCCATGGGAACGAAAATAAATGGA 59.596 41.667 28.27 0.00 36.27 3.41
427 428 5.348164 CCATGGGAACGAAAATAAATGGAC 58.652 41.667 2.85 0.00 36.27 4.02
428 429 4.688511 TGGGAACGAAAATAAATGGACG 57.311 40.909 0.00 0.00 0.00 4.79
429 430 3.119779 TGGGAACGAAAATAAATGGACGC 60.120 43.478 0.00 0.00 0.00 5.19
430 431 3.119779 GGGAACGAAAATAAATGGACGCA 60.120 43.478 0.00 0.00 0.00 5.24
431 432 4.439563 GGGAACGAAAATAAATGGACGCAT 60.440 41.667 0.00 0.00 0.00 4.73
432 433 5.220892 GGGAACGAAAATAAATGGACGCATA 60.221 40.000 0.00 0.00 0.00 3.14
433 434 5.907391 GGAACGAAAATAAATGGACGCATAG 59.093 40.000 0.00 0.00 0.00 2.23
434 435 6.238266 GGAACGAAAATAAATGGACGCATAGA 60.238 38.462 0.00 0.00 0.00 1.98
435 436 6.671614 ACGAAAATAAATGGACGCATAGAA 57.328 33.333 0.00 0.00 0.00 2.10
436 437 6.483687 ACGAAAATAAATGGACGCATAGAAC 58.516 36.000 0.00 0.00 0.00 3.01
437 438 5.615581 CGAAAATAAATGGACGCATAGAACG 59.384 40.000 0.00 0.00 0.00 3.95
438 439 5.418310 AAATAAATGGACGCATAGAACGG 57.582 39.130 0.00 0.00 34.00 4.44
439 440 1.663695 AAATGGACGCATAGAACGGG 58.336 50.000 0.00 0.00 34.00 5.28
440 441 0.179056 AATGGACGCATAGAACGGGG 60.179 55.000 0.00 0.00 34.00 5.73
441 442 1.335132 ATGGACGCATAGAACGGGGT 61.335 55.000 0.00 0.00 34.00 4.95
442 443 0.683828 TGGACGCATAGAACGGGGTA 60.684 55.000 0.00 0.00 34.00 3.69
443 444 0.461135 GGACGCATAGAACGGGGTAA 59.539 55.000 0.00 0.00 34.00 2.85
444 445 1.564207 GACGCATAGAACGGGGTAAC 58.436 55.000 0.00 0.00 34.00 2.50
445 446 0.896923 ACGCATAGAACGGGGTAACA 59.103 50.000 0.00 0.00 39.74 2.41
446 447 1.275856 ACGCATAGAACGGGGTAACAA 59.724 47.619 0.00 0.00 39.74 2.83
447 448 2.093341 ACGCATAGAACGGGGTAACAAT 60.093 45.455 0.00 0.00 39.74 2.71
448 449 2.940410 CGCATAGAACGGGGTAACAATT 59.060 45.455 0.00 0.00 39.74 2.32
449 450 3.375922 CGCATAGAACGGGGTAACAATTT 59.624 43.478 0.00 0.00 39.74 1.82
450 451 4.495184 CGCATAGAACGGGGTAACAATTTC 60.495 45.833 0.00 0.00 39.74 2.17
451 452 4.201980 GCATAGAACGGGGTAACAATTTCC 60.202 45.833 0.00 0.00 39.74 3.13
452 453 2.799017 AGAACGGGGTAACAATTTCCC 58.201 47.619 0.00 0.00 40.41 3.97
456 457 1.913778 GGGGTAACAATTTCCCGTGT 58.086 50.000 0.00 0.00 41.92 4.49
457 458 2.241160 GGGGTAACAATTTCCCGTGTT 58.759 47.619 0.00 0.00 41.92 3.32
458 459 3.419943 GGGGTAACAATTTCCCGTGTTA 58.580 45.455 0.00 0.00 41.92 2.41
463 464 3.612472 ACAATTTCCCGTGTTACAACG 57.388 42.857 0.00 0.00 43.20 4.10
464 465 2.287129 ACAATTTCCCGTGTTACAACGC 60.287 45.455 0.00 0.00 42.23 4.84
465 466 1.595466 ATTTCCCGTGTTACAACGCA 58.405 45.000 6.48 0.00 42.23 5.24
466 467 0.656785 TTTCCCGTGTTACAACGCAC 59.343 50.000 6.48 0.00 42.23 5.34
471 472 2.299562 GTGTTACAACGCACGGACA 58.700 52.632 0.88 0.00 39.17 4.02
472 473 0.863144 GTGTTACAACGCACGGACAT 59.137 50.000 0.88 0.00 39.17 3.06
473 474 1.262151 GTGTTACAACGCACGGACATT 59.738 47.619 0.88 0.00 39.17 2.71
474 475 1.941294 TGTTACAACGCACGGACATTT 59.059 42.857 0.00 0.00 0.00 2.32
475 476 2.286477 TGTTACAACGCACGGACATTTG 60.286 45.455 0.00 0.00 0.00 2.32
476 477 1.584175 TACAACGCACGGACATTTGT 58.416 45.000 0.00 0.00 34.79 2.83
477 478 0.028770 ACAACGCACGGACATTTGTG 59.971 50.000 0.00 0.00 39.10 3.33
484 485 3.991605 CACGGACATTTGTGCTAGTAC 57.008 47.619 3.70 3.70 33.97 2.73
485 486 2.671396 CACGGACATTTGTGCTAGTACC 59.329 50.000 8.60 0.00 33.97 3.34
486 487 1.924524 CGGACATTTGTGCTAGTACCG 59.075 52.381 8.60 0.00 33.97 4.02
487 488 2.416296 CGGACATTTGTGCTAGTACCGA 60.416 50.000 8.60 0.00 40.16 4.69
488 489 3.187700 GGACATTTGTGCTAGTACCGAG 58.812 50.000 8.60 0.00 33.32 4.63
489 490 3.368116 GGACATTTGTGCTAGTACCGAGT 60.368 47.826 8.60 2.21 33.32 4.18
490 491 4.142315 GGACATTTGTGCTAGTACCGAGTA 60.142 45.833 8.60 0.00 33.32 2.59
491 492 5.395682 ACATTTGTGCTAGTACCGAGTAA 57.604 39.130 8.60 0.00 0.00 2.24
492 493 5.786311 ACATTTGTGCTAGTACCGAGTAAA 58.214 37.500 8.60 2.51 0.00 2.01
493 494 6.403878 ACATTTGTGCTAGTACCGAGTAAAT 58.596 36.000 8.60 4.71 0.00 1.40
494 495 6.877322 ACATTTGTGCTAGTACCGAGTAAATT 59.123 34.615 8.60 0.00 0.00 1.82
495 496 6.956299 TTTGTGCTAGTACCGAGTAAATTC 57.044 37.500 8.60 0.00 0.00 2.17
496 497 5.909621 TGTGCTAGTACCGAGTAAATTCT 57.090 39.130 8.60 0.00 0.00 2.40
497 498 6.276832 TGTGCTAGTACCGAGTAAATTCTT 57.723 37.500 8.60 0.00 0.00 2.52
498 499 6.694447 TGTGCTAGTACCGAGTAAATTCTTT 58.306 36.000 8.60 0.00 0.00 2.52
499 500 7.156673 TGTGCTAGTACCGAGTAAATTCTTTT 58.843 34.615 8.60 0.00 0.00 2.27
500 501 7.658575 TGTGCTAGTACCGAGTAAATTCTTTTT 59.341 33.333 8.60 0.00 0.00 1.94
531 532 4.802999 GGATACGGGGAAAGTATCTAACG 58.197 47.826 13.76 0.00 45.79 3.18
532 533 4.279420 GGATACGGGGAAAGTATCTAACGT 59.721 45.833 13.76 0.00 45.79 3.99
533 534 5.221322 GGATACGGGGAAAGTATCTAACGTT 60.221 44.000 5.88 5.88 45.79 3.99
534 535 3.853475 ACGGGGAAAGTATCTAACGTTG 58.147 45.455 11.99 0.97 31.30 4.10
535 536 3.192466 CGGGGAAAGTATCTAACGTTGG 58.808 50.000 11.99 8.48 29.28 3.77
536 537 3.119029 CGGGGAAAGTATCTAACGTTGGA 60.119 47.826 17.11 17.11 29.28 3.53
537 538 4.442472 CGGGGAAAGTATCTAACGTTGGAT 60.442 45.833 27.14 27.14 29.28 3.41
538 539 5.221303 CGGGGAAAGTATCTAACGTTGGATA 60.221 44.000 25.20 25.20 29.28 2.59
539 540 6.517864 CGGGGAAAGTATCTAACGTTGGATAT 60.518 42.308 29.56 18.25 33.97 1.63
540 541 6.649557 GGGGAAAGTATCTAACGTTGGATATG 59.350 42.308 29.56 7.13 33.97 1.78
541 542 7.439381 GGGAAAGTATCTAACGTTGGATATGA 58.561 38.462 29.56 13.21 33.97 2.15
542 543 7.384387 GGGAAAGTATCTAACGTTGGATATGAC 59.616 40.741 29.56 22.01 33.97 3.06
543 544 7.114529 GGAAAGTATCTAACGTTGGATATGACG 59.885 40.741 29.56 0.00 44.34 4.35
544 545 6.872628 AGTATCTAACGTTGGATATGACGA 57.127 37.500 29.56 11.92 41.53 4.20
545 546 6.900189 AGTATCTAACGTTGGATATGACGAG 58.100 40.000 29.56 8.97 41.53 4.18
546 547 5.769484 ATCTAACGTTGGATATGACGAGT 57.231 39.130 23.77 0.00 41.53 4.18
547 548 6.872628 ATCTAACGTTGGATATGACGAGTA 57.127 37.500 23.77 0.00 41.53 2.59
548 549 6.682423 TCTAACGTTGGATATGACGAGTAA 57.318 37.500 10.63 0.00 41.53 2.24
549 550 6.489675 TCTAACGTTGGATATGACGAGTAAC 58.510 40.000 10.63 0.00 41.53 2.50
551 552 2.466571 CGTTGGATATGACGAGTAACGC 59.533 50.000 0.00 0.00 46.94 4.84
552 553 2.787601 TGGATATGACGAGTAACGCC 57.212 50.000 0.00 0.00 46.94 5.68
553 554 1.002142 TGGATATGACGAGTAACGCCG 60.002 52.381 0.00 0.00 46.94 6.46
554 555 1.265095 GGATATGACGAGTAACGCCGA 59.735 52.381 0.00 0.00 46.94 5.54
555 556 2.287188 GGATATGACGAGTAACGCCGAA 60.287 50.000 0.00 0.00 46.94 4.30
556 557 2.178474 TATGACGAGTAACGCCGAAC 57.822 50.000 0.00 0.00 46.94 3.95
557 558 0.457337 ATGACGAGTAACGCCGAACC 60.457 55.000 0.00 0.00 46.94 3.62
558 559 1.803117 GACGAGTAACGCCGAACCC 60.803 63.158 0.00 0.00 46.94 4.11
559 560 2.259204 CGAGTAACGCCGAACCCA 59.741 61.111 0.00 0.00 34.51 4.51
560 561 1.373246 CGAGTAACGCCGAACCCAA 60.373 57.895 0.00 0.00 34.51 4.12
561 562 1.349259 CGAGTAACGCCGAACCCAAG 61.349 60.000 0.00 0.00 34.51 3.61
562 563 0.320160 GAGTAACGCCGAACCCAAGT 60.320 55.000 0.00 0.00 0.00 3.16
563 564 0.968405 AGTAACGCCGAACCCAAGTA 59.032 50.000 0.00 0.00 0.00 2.24
564 565 1.067354 AGTAACGCCGAACCCAAGTAG 60.067 52.381 0.00 0.00 0.00 2.57
565 566 0.390209 TAACGCCGAACCCAAGTAGC 60.390 55.000 0.00 0.00 0.00 3.58
566 567 2.047655 CGCCGAACCCAAGTAGCA 60.048 61.111 0.00 0.00 0.00 3.49
567 568 2.100631 CGCCGAACCCAAGTAGCAG 61.101 63.158 0.00 0.00 0.00 4.24
568 569 1.745489 GCCGAACCCAAGTAGCAGG 60.745 63.158 0.00 0.00 0.00 4.85
574 575 3.577389 CCCAAGTAGCAGGGGAAAG 57.423 57.895 0.00 0.00 45.08 2.62
575 576 0.681243 CCCAAGTAGCAGGGGAAAGC 60.681 60.000 0.00 0.00 45.08 3.51
576 577 1.026718 CCAAGTAGCAGGGGAAAGCG 61.027 60.000 0.00 0.00 35.48 4.68
577 578 1.377333 AAGTAGCAGGGGAAAGCGC 60.377 57.895 0.00 0.00 35.48 5.92
578 579 3.195698 GTAGCAGGGGAAAGCGCG 61.196 66.667 0.00 0.00 35.48 6.86
579 580 3.387091 TAGCAGGGGAAAGCGCGA 61.387 61.111 12.10 0.00 35.48 5.87
580 581 3.371097 TAGCAGGGGAAAGCGCGAG 62.371 63.158 12.10 0.00 35.48 5.03
594 595 2.831742 CGAGCCGCCCTACTGGTA 60.832 66.667 0.00 0.00 36.04 3.25
595 596 2.813200 GAGCCGCCCTACTGGTAC 59.187 66.667 0.00 0.00 36.04 3.34
596 597 2.762875 AGCCGCCCTACTGGTACC 60.763 66.667 4.43 4.43 36.04 3.34
597 598 4.217159 GCCGCCCTACTGGTACCG 62.217 72.222 7.57 4.79 36.04 4.02
598 599 2.757099 CCGCCCTACTGGTACCGT 60.757 66.667 7.57 10.74 36.04 4.83
599 600 2.779033 CCGCCCTACTGGTACCGTC 61.779 68.421 7.57 0.00 36.04 4.79
600 601 2.779033 CGCCCTACTGGTACCGTCC 61.779 68.421 7.57 0.00 36.04 4.79
601 602 1.683365 GCCCTACTGGTACCGTCCA 60.683 63.158 7.57 0.00 36.04 4.02
602 603 1.047034 GCCCTACTGGTACCGTCCAT 61.047 60.000 7.57 0.00 36.84 3.41
603 604 1.492764 CCCTACTGGTACCGTCCATT 58.507 55.000 7.57 0.00 36.84 3.16
604 605 2.669781 CCCTACTGGTACCGTCCATTA 58.330 52.381 7.57 0.00 36.84 1.90
605 606 3.236896 CCCTACTGGTACCGTCCATTAT 58.763 50.000 7.57 0.00 36.84 1.28
606 607 3.644738 CCCTACTGGTACCGTCCATTATT 59.355 47.826 7.57 0.00 36.84 1.40
607 608 4.834496 CCCTACTGGTACCGTCCATTATTA 59.166 45.833 7.57 0.00 36.84 0.98
608 609 5.047519 CCCTACTGGTACCGTCCATTATTAG 60.048 48.000 7.57 0.00 36.84 1.73
609 610 4.950205 ACTGGTACCGTCCATTATTAGG 57.050 45.455 7.57 0.00 36.84 2.69
610 611 4.292643 ACTGGTACCGTCCATTATTAGGT 58.707 43.478 7.57 0.00 36.84 3.08
611 612 5.457686 ACTGGTACCGTCCATTATTAGGTA 58.542 41.667 7.57 0.00 36.84 3.08
612 613 5.898972 ACTGGTACCGTCCATTATTAGGTAA 59.101 40.000 7.57 0.00 38.93 2.85
613 614 6.041296 ACTGGTACCGTCCATTATTAGGTAAG 59.959 42.308 7.57 0.00 38.93 2.34
796 797 0.635731 CGCGCTGTCTTTTCGTCTAG 59.364 55.000 5.56 0.00 0.00 2.43
1519 1523 2.860971 AGCAGACCCCTTTGGCCT 60.861 61.111 3.32 0.00 37.83 5.19
1846 1850 2.040278 TGTAAGGCTGACTGCTGGATTT 59.960 45.455 3.12 0.00 42.39 2.17
2050 2054 2.450476 CCCTTTCAATTGCTAGGCTGT 58.550 47.619 16.16 0.00 0.00 4.40
2093 2097 0.036671 TCAGACATGCTGGCACTCAG 60.037 55.000 14.50 0.00 44.98 3.35
2146 2150 1.227674 CGGGGCCTCATGAGTTAGC 60.228 63.158 21.11 16.47 0.00 3.09
2284 2288 5.167121 CAAAACAGTGAATGTGGTTGTTCA 58.833 37.500 0.00 0.00 43.00 3.18
2749 2753 6.254480 GCTTTTCAGCTTCTAATAAGTCTGC 58.746 40.000 0.00 0.00 43.51 4.26
2750 2754 6.093357 GCTTTTCAGCTTCTAATAAGTCTGCT 59.907 38.462 0.00 0.00 43.51 4.24
2751 2755 7.602517 TTTTCAGCTTCTAATAAGTCTGCTC 57.397 36.000 0.00 0.00 0.00 4.26
2752 2756 5.269505 TCAGCTTCTAATAAGTCTGCTCC 57.730 43.478 0.00 0.00 0.00 4.70
2753 2757 4.047822 CAGCTTCTAATAAGTCTGCTCCG 58.952 47.826 0.00 0.00 0.00 4.63
2754 2758 2.797719 GCTTCTAATAAGTCTGCTCCGC 59.202 50.000 0.00 0.00 0.00 5.54
2755 2759 3.385577 CTTCTAATAAGTCTGCTCCGCC 58.614 50.000 0.00 0.00 0.00 6.13
2756 2760 2.384828 TCTAATAAGTCTGCTCCGCCA 58.615 47.619 0.00 0.00 0.00 5.69
2757 2761 2.764010 TCTAATAAGTCTGCTCCGCCAA 59.236 45.455 0.00 0.00 0.00 4.52
2758 2762 2.029838 AATAAGTCTGCTCCGCCAAG 57.970 50.000 0.00 0.00 0.00 3.61
2759 2763 0.905357 ATAAGTCTGCTCCGCCAAGT 59.095 50.000 0.00 0.00 0.00 3.16
2760 2764 0.037326 TAAGTCTGCTCCGCCAAGTG 60.037 55.000 0.00 0.00 0.00 3.16
2761 2765 2.738213 AAGTCTGCTCCGCCAAGTGG 62.738 60.000 0.00 0.00 38.53 4.00
2762 2766 4.020617 TCTGCTCCGCCAAGTGGG 62.021 66.667 0.00 0.00 40.85 4.61
2763 2767 4.020617 CTGCTCCGCCAAGTGGGA 62.021 66.667 0.00 0.00 40.01 4.37
2972 3000 9.090692 GCAGATGCAAATAGACATGTAAATTTT 57.909 29.630 12.81 3.39 41.59 1.82
3064 3092 3.612247 CTGGCCAACCTCTCACGGG 62.612 68.421 7.01 0.00 36.63 5.28
3254 3282 7.292129 GACCAGTAGTCAACTTATTAGCAAC 57.708 40.000 0.00 0.00 45.55 4.17
3299 3327 0.251634 GAACTCTCCAAGCCTCCCAG 59.748 60.000 0.00 0.00 0.00 4.45
3347 3375 3.026694 AGCTCCTATTGTTTCATTGCCC 58.973 45.455 0.00 0.00 0.00 5.36
3365 3393 1.737793 CCCGCAGTGTTAAAGGACATC 59.262 52.381 0.00 0.00 0.00 3.06
3600 3628 2.099756 GTGGTAAAGCCCTGATGAATGC 59.900 50.000 0.00 0.00 36.04 3.56
3786 3819 5.975693 CCAATTCCTGGCTTTACTGTAAA 57.024 39.130 12.08 12.08 38.76 2.01
3787 3820 5.954335 CCAATTCCTGGCTTTACTGTAAAG 58.046 41.667 27.78 27.78 46.07 1.85
4638 4671 6.768861 TGGAATTTTCTCGAGAAGGTTTGTTA 59.231 34.615 25.73 7.82 35.21 2.41
4685 4718 0.454452 GGACGCATTTTCCACTTCGC 60.454 55.000 0.00 0.00 32.82 4.70
4925 4958 7.256296 CCAAAAAGTAAAGATCTTGATGGGGTT 60.256 37.037 9.17 0.00 32.59 4.11
4961 4994 2.618709 TGCAGTAGTGATCATCGACGAT 59.381 45.455 4.05 4.05 0.00 3.73
5222 5255 2.806745 CGTTGGCGGTAATGATGGATCT 60.807 50.000 0.00 0.00 0.00 2.75
5223 5256 2.549064 TGGCGGTAATGATGGATCTG 57.451 50.000 0.00 0.00 0.00 2.90
5515 5548 2.606108 CACGAACCAGATTGACGATCA 58.394 47.619 5.46 0.00 37.22 2.92
5528 5561 4.371855 TGACGATCAGGTTACTCATGTC 57.628 45.455 0.00 0.00 0.00 3.06
5619 5652 6.884280 CAGGATGGTGAGGAATTTATTACC 57.116 41.667 0.00 0.00 0.00 2.85
5800 5833 1.278127 TCCCGAGTCCAAATTCCTCAC 59.722 52.381 0.00 0.00 0.00 3.51
5908 5944 4.497300 CCATAAGAAAACCACATGCCAAG 58.503 43.478 0.00 0.00 0.00 3.61
6215 6260 2.738938 ATTAAGTCCGCGGACCCCC 61.739 63.158 45.66 27.54 45.59 5.40
6367 6412 2.663602 GTGTGAACACGTGATAGCAGAG 59.336 50.000 25.01 0.00 37.10 3.35
6474 6519 7.060421 GGAGGTAATGATGGAAATTAACCTGA 58.940 38.462 0.00 0.00 29.04 3.86
6561 6612 2.936919 TGAAGTGGAGTCACAATGCT 57.063 45.000 0.00 0.00 45.91 3.79
6589 6640 1.202510 GGCGCAAGTCATCATCTCTCT 60.203 52.381 10.83 0.00 45.31 3.10
6633 6684 6.654582 TCAATGAGCTAAGTGCATGTAGAAAA 59.345 34.615 10.04 0.00 45.94 2.29
6702 6754 2.772077 TGAATGCTAAACGCCCACTA 57.228 45.000 0.00 0.00 38.05 2.74
6703 6755 2.627945 TGAATGCTAAACGCCCACTAG 58.372 47.619 0.00 0.00 38.05 2.57
6704 6756 1.940613 GAATGCTAAACGCCCACTAGG 59.059 52.381 0.00 0.00 38.05 3.02
6705 6757 1.200519 ATGCTAAACGCCCACTAGGA 58.799 50.000 0.00 0.00 38.24 2.94
6706 6758 0.248289 TGCTAAACGCCCACTAGGAC 59.752 55.000 0.00 0.00 38.24 3.85
6707 6759 0.804933 GCTAAACGCCCACTAGGACG 60.805 60.000 0.00 0.00 39.92 4.79
6708 6760 0.179119 CTAAACGCCCACTAGGACGG 60.179 60.000 0.00 0.00 38.84 4.79
6709 6761 0.611618 TAAACGCCCACTAGGACGGA 60.612 55.000 0.00 0.00 38.84 4.69
6710 6762 1.885163 AAACGCCCACTAGGACGGAG 61.885 60.000 0.00 0.00 38.84 4.63
6711 6763 3.528370 CGCCCACTAGGACGGAGG 61.528 72.222 0.00 0.00 38.24 4.30
6712 6764 3.155167 GCCCACTAGGACGGAGGG 61.155 72.222 0.00 0.00 42.55 4.30
6713 6765 2.687902 CCCACTAGGACGGAGGGA 59.312 66.667 0.00 0.00 42.25 4.20
6714 6766 1.455959 CCCACTAGGACGGAGGGAG 60.456 68.421 0.00 0.00 42.25 4.30
6715 6767 1.306970 CCACTAGGACGGAGGGAGT 59.693 63.158 0.00 0.00 36.89 3.85
6716 6768 0.549950 CCACTAGGACGGAGGGAGTA 59.450 60.000 0.00 0.00 36.89 2.59
6717 6769 1.677942 CACTAGGACGGAGGGAGTAC 58.322 60.000 0.00 0.00 0.00 2.73
6718 6770 0.550432 ACTAGGACGGAGGGAGTACC 59.450 60.000 0.00 0.00 40.67 3.34
6735 6787 3.577389 CCTCCCAAGGCCTACTTTG 57.423 57.895 5.16 0.00 37.29 2.77
6736 6788 0.034089 CCTCCCAAGGCCTACTTTGG 60.034 60.000 5.16 10.47 42.06 3.28
6737 6789 0.698818 CTCCCAAGGCCTACTTTGGT 59.301 55.000 18.07 0.00 41.56 3.67
6738 6790 1.075536 CTCCCAAGGCCTACTTTGGTT 59.924 52.381 18.07 0.00 41.56 3.67
6739 6791 1.074889 TCCCAAGGCCTACTTTGGTTC 59.925 52.381 18.07 0.00 41.56 3.62
6740 6792 1.165270 CCAAGGCCTACTTTGGTTCG 58.835 55.000 5.16 0.00 37.29 3.95
6741 6793 1.544759 CCAAGGCCTACTTTGGTTCGT 60.545 52.381 5.16 0.00 37.29 3.85
6742 6794 2.289819 CCAAGGCCTACTTTGGTTCGTA 60.290 50.000 5.16 0.00 37.29 3.43
6743 6795 3.000727 CAAGGCCTACTTTGGTTCGTAG 58.999 50.000 5.16 0.00 37.29 3.51
6752 6804 7.611213 CTACTTTGGTTCGTAGGAATTTCAT 57.389 36.000 0.50 0.00 34.05 2.57
6753 6805 8.712285 CTACTTTGGTTCGTAGGAATTTCATA 57.288 34.615 0.50 0.00 34.05 2.15
6754 6806 7.611213 ACTTTGGTTCGTAGGAATTTCATAG 57.389 36.000 0.50 7.69 34.05 2.23
6755 6807 6.598064 ACTTTGGTTCGTAGGAATTTCATAGG 59.402 38.462 0.50 4.80 34.05 2.57
6756 6808 5.943349 TGGTTCGTAGGAATTTCATAGGA 57.057 39.130 8.84 8.84 34.05 2.94
6757 6809 6.494666 TGGTTCGTAGGAATTTCATAGGAT 57.505 37.500 12.55 0.00 34.05 3.24
6758 6810 7.606135 TGGTTCGTAGGAATTTCATAGGATA 57.394 36.000 12.55 4.02 34.05 2.59
6759 6811 8.025270 TGGTTCGTAGGAATTTCATAGGATAA 57.975 34.615 12.55 0.00 34.05 1.75
6760 6812 8.148351 TGGTTCGTAGGAATTTCATAGGATAAG 58.852 37.037 12.55 0.00 34.05 1.73
6761 6813 8.365647 GGTTCGTAGGAATTTCATAGGATAAGA 58.634 37.037 12.55 0.00 34.05 2.10
6762 6814 9.930693 GTTCGTAGGAATTTCATAGGATAAGAT 57.069 33.333 12.55 0.00 34.05 2.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.067494 GCTGGAATCAGTTGAAATAATAGTGGT 59.933 37.037 0.00 0.00 42.78 4.16
1 2 7.420800 GCTGGAATCAGTTGAAATAATAGTGG 58.579 38.462 0.00 0.00 42.78 4.00
2 3 7.011389 TCGCTGGAATCAGTTGAAATAATAGTG 59.989 37.037 0.00 0.00 42.78 2.74
3 4 7.011482 GTCGCTGGAATCAGTTGAAATAATAGT 59.989 37.037 0.00 0.00 42.78 2.12
4 5 7.011389 TGTCGCTGGAATCAGTTGAAATAATAG 59.989 37.037 0.00 0.00 42.78 1.73
7 8 5.000591 TGTCGCTGGAATCAGTTGAAATAA 58.999 37.500 0.00 0.00 42.78 1.40
8 9 4.574892 TGTCGCTGGAATCAGTTGAAATA 58.425 39.130 0.00 0.00 42.78 1.40
9 10 3.411446 TGTCGCTGGAATCAGTTGAAAT 58.589 40.909 0.00 0.00 42.78 2.17
10 11 2.807967 CTGTCGCTGGAATCAGTTGAAA 59.192 45.455 0.00 0.00 42.78 2.69
11 12 2.224281 ACTGTCGCTGGAATCAGTTGAA 60.224 45.455 0.00 0.00 42.78 2.69
12 13 1.344438 ACTGTCGCTGGAATCAGTTGA 59.656 47.619 0.00 0.00 42.78 3.18
13 14 1.462283 CACTGTCGCTGGAATCAGTTG 59.538 52.381 0.00 0.00 42.78 3.16
14 15 1.800805 CACTGTCGCTGGAATCAGTT 58.199 50.000 0.00 0.00 42.78 3.16
15 16 0.671781 GCACTGTCGCTGGAATCAGT 60.672 55.000 0.00 0.00 42.78 3.41
16 17 0.390866 AGCACTGTCGCTGGAATCAG 60.391 55.000 4.36 0.00 41.85 2.90
17 18 0.035317 AAGCACTGTCGCTGGAATCA 59.965 50.000 5.69 0.00 42.89 2.57
18 19 0.723981 GAAGCACTGTCGCTGGAATC 59.276 55.000 5.69 0.00 42.89 2.52
19 20 0.322975 AGAAGCACTGTCGCTGGAAT 59.677 50.000 5.69 0.00 42.89 3.01
20 21 0.966179 TAGAAGCACTGTCGCTGGAA 59.034 50.000 5.69 0.00 42.89 3.53
21 22 0.966179 TTAGAAGCACTGTCGCTGGA 59.034 50.000 5.69 0.00 42.89 3.86
22 23 1.071605 GTTAGAAGCACTGTCGCTGG 58.928 55.000 5.69 0.00 42.89 4.85
23 24 0.710567 CGTTAGAAGCACTGTCGCTG 59.289 55.000 5.69 0.00 42.89 5.18
24 25 0.388649 CCGTTAGAAGCACTGTCGCT 60.389 55.000 0.00 0.00 46.67 4.93
25 26 0.666577 ACCGTTAGAAGCACTGTCGC 60.667 55.000 0.00 0.00 0.00 5.19
26 27 1.455786 CAACCGTTAGAAGCACTGTCG 59.544 52.381 0.00 0.00 0.00 4.35
27 28 1.798813 CCAACCGTTAGAAGCACTGTC 59.201 52.381 0.00 0.00 0.00 3.51
28 29 1.414919 TCCAACCGTTAGAAGCACTGT 59.585 47.619 0.00 0.00 0.00 3.55
29 30 2.163818 TCCAACCGTTAGAAGCACTG 57.836 50.000 0.00 0.00 0.00 3.66
30 31 2.038557 ACATCCAACCGTTAGAAGCACT 59.961 45.455 0.00 0.00 0.00 4.40
31 32 2.423577 ACATCCAACCGTTAGAAGCAC 58.576 47.619 0.00 0.00 0.00 4.40
32 33 2.851263 ACATCCAACCGTTAGAAGCA 57.149 45.000 0.00 0.00 0.00 3.91
33 34 4.142752 GGTAAACATCCAACCGTTAGAAGC 60.143 45.833 0.00 0.00 0.00 3.86
34 35 5.243207 AGGTAAACATCCAACCGTTAGAAG 58.757 41.667 0.00 0.00 38.37 2.85
35 36 5.231702 AGGTAAACATCCAACCGTTAGAA 57.768 39.130 0.00 0.00 38.37 2.10
36 37 4.895668 AGGTAAACATCCAACCGTTAGA 57.104 40.909 0.00 0.00 38.37 2.10
37 38 5.952526 AAAGGTAAACATCCAACCGTTAG 57.047 39.130 0.00 0.00 38.37 2.34
38 39 7.999450 ATAAAAGGTAAACATCCAACCGTTA 57.001 32.000 0.00 0.00 38.37 3.18
39 40 6.904463 ATAAAAGGTAAACATCCAACCGTT 57.096 33.333 0.00 0.00 38.37 4.44
40 41 6.904463 AATAAAAGGTAAACATCCAACCGT 57.096 33.333 0.00 0.00 38.37 4.83
41 42 8.596271 AAAAATAAAAGGTAAACATCCAACCG 57.404 30.769 0.00 0.00 38.37 4.44
63 64 9.828852 ACGCGTGAATAACAGAAAATAATAAAA 57.171 25.926 12.93 0.00 0.00 1.52
64 65 9.480538 GACGCGTGAATAACAGAAAATAATAAA 57.519 29.630 20.70 0.00 0.00 1.40
65 66 8.117988 GGACGCGTGAATAACAGAAAATAATAA 58.882 33.333 20.70 0.00 0.00 1.40
66 67 7.493320 AGGACGCGTGAATAACAGAAAATAATA 59.507 33.333 20.70 0.00 0.00 0.98
67 68 6.315393 AGGACGCGTGAATAACAGAAAATAAT 59.685 34.615 20.70 0.00 0.00 1.28
68 69 5.640357 AGGACGCGTGAATAACAGAAAATAA 59.360 36.000 20.70 0.00 0.00 1.40
69 70 5.062934 CAGGACGCGTGAATAACAGAAAATA 59.937 40.000 20.70 0.00 0.00 1.40
70 71 4.000988 AGGACGCGTGAATAACAGAAAAT 58.999 39.130 20.70 0.00 0.00 1.82
71 72 3.185594 CAGGACGCGTGAATAACAGAAAA 59.814 43.478 20.70 0.00 0.00 2.29
72 73 2.734606 CAGGACGCGTGAATAACAGAAA 59.265 45.455 20.70 0.00 0.00 2.52
73 74 2.288579 ACAGGACGCGTGAATAACAGAA 60.289 45.455 20.70 0.00 0.00 3.02
74 75 1.271379 ACAGGACGCGTGAATAACAGA 59.729 47.619 20.70 0.00 0.00 3.41
75 76 1.710013 ACAGGACGCGTGAATAACAG 58.290 50.000 20.70 0.00 0.00 3.16
76 77 2.157834 AACAGGACGCGTGAATAACA 57.842 45.000 20.70 0.00 0.00 2.41
77 78 2.471749 CGAAACAGGACGCGTGAATAAC 60.472 50.000 20.70 0.00 0.00 1.89
78 79 1.722464 CGAAACAGGACGCGTGAATAA 59.278 47.619 20.70 0.00 0.00 1.40
79 80 1.336148 ACGAAACAGGACGCGTGAATA 60.336 47.619 20.70 0.00 35.44 1.75
80 81 0.599204 ACGAAACAGGACGCGTGAAT 60.599 50.000 20.70 0.00 35.44 2.57
81 82 1.210545 GACGAAACAGGACGCGTGAA 61.211 55.000 20.70 0.00 37.07 3.18
82 83 1.659335 GACGAAACAGGACGCGTGA 60.659 57.895 20.70 0.00 37.07 4.35
83 84 2.654912 GGACGAAACAGGACGCGTG 61.655 63.158 20.70 4.68 37.07 5.34
84 85 2.355481 GGACGAAACAGGACGCGT 60.355 61.111 13.85 13.85 39.99 6.01
85 86 3.110178 GGGACGAAACAGGACGCG 61.110 66.667 3.53 3.53 0.00 6.01
98 99 2.813908 CTAGTTGGCGTGCGGGAC 60.814 66.667 0.00 0.00 0.00 4.46
99 100 4.077184 CCTAGTTGGCGTGCGGGA 62.077 66.667 0.00 0.00 0.00 5.14
102 103 4.077184 TCCCCTAGTTGGCGTGCG 62.077 66.667 0.00 0.00 0.00 5.34
103 104 2.125106 CTCCCCTAGTTGGCGTGC 60.125 66.667 0.00 0.00 0.00 5.34
104 105 2.584608 CCTCCCCTAGTTGGCGTG 59.415 66.667 0.00 0.00 0.00 5.34
105 106 2.687566 CCCTCCCCTAGTTGGCGT 60.688 66.667 0.00 0.00 0.00 5.68
106 107 3.480133 CCCCTCCCCTAGTTGGCG 61.480 72.222 0.00 0.00 0.00 5.69
107 108 3.097162 CCCCCTCCCCTAGTTGGC 61.097 72.222 0.00 0.00 0.00 4.52
121 122 3.871850 TAAAACTGCGCCCACCCCC 62.872 63.158 4.18 0.00 0.00 5.40
122 123 2.282603 TAAAACTGCGCCCACCCC 60.283 61.111 4.18 0.00 0.00 4.95
123 124 2.632544 GGTAAAACTGCGCCCACCC 61.633 63.158 4.18 0.00 0.00 4.61
124 125 1.248101 ATGGTAAAACTGCGCCCACC 61.248 55.000 4.18 3.53 0.00 4.61
125 126 0.170339 GATGGTAAAACTGCGCCCAC 59.830 55.000 4.18 0.00 0.00 4.61
126 127 0.037590 AGATGGTAAAACTGCGCCCA 59.962 50.000 4.18 2.73 0.00 5.36
127 128 0.733150 GAGATGGTAAAACTGCGCCC 59.267 55.000 4.18 0.00 0.00 6.13
128 129 1.666189 GAGAGATGGTAAAACTGCGCC 59.334 52.381 4.18 0.00 0.00 6.53
129 130 1.666189 GGAGAGATGGTAAAACTGCGC 59.334 52.381 0.00 0.00 0.00 6.09
130 131 2.280628 GGGAGAGATGGTAAAACTGCG 58.719 52.381 0.00 0.00 0.00 5.18
131 132 2.280628 CGGGAGAGATGGTAAAACTGC 58.719 52.381 0.00 0.00 0.00 4.40
132 133 2.280628 GCGGGAGAGATGGTAAAACTG 58.719 52.381 0.00 0.00 0.00 3.16
133 134 1.209747 GGCGGGAGAGATGGTAAAACT 59.790 52.381 0.00 0.00 0.00 2.66
134 135 1.664873 GGCGGGAGAGATGGTAAAAC 58.335 55.000 0.00 0.00 0.00 2.43
135 136 0.177141 CGGCGGGAGAGATGGTAAAA 59.823 55.000 0.00 0.00 0.00 1.52
136 137 1.820581 CGGCGGGAGAGATGGTAAA 59.179 57.895 0.00 0.00 0.00 2.01
137 138 2.792947 GCGGCGGGAGAGATGGTAA 61.793 63.158 9.78 0.00 0.00 2.85
138 139 3.224324 GCGGCGGGAGAGATGGTA 61.224 66.667 9.78 0.00 0.00 3.25
140 141 4.292178 GAGCGGCGGGAGAGATGG 62.292 72.222 9.78 0.00 0.00 3.51
141 142 3.222855 AGAGCGGCGGGAGAGATG 61.223 66.667 9.78 0.00 0.00 2.90
142 143 3.222855 CAGAGCGGCGGGAGAGAT 61.223 66.667 9.78 0.00 0.00 2.75
143 144 3.938637 TTCAGAGCGGCGGGAGAGA 62.939 63.158 9.78 0.00 0.00 3.10
144 145 2.790791 ATTCAGAGCGGCGGGAGAG 61.791 63.158 9.78 0.00 0.00 3.20
145 146 2.759973 ATTCAGAGCGGCGGGAGA 60.760 61.111 9.78 0.00 0.00 3.71
146 147 2.587194 CATTCAGAGCGGCGGGAG 60.587 66.667 9.78 0.00 0.00 4.30
147 148 4.838152 GCATTCAGAGCGGCGGGA 62.838 66.667 9.78 0.00 0.00 5.14
150 151 2.923426 TTAGGGCATTCAGAGCGGCG 62.923 60.000 0.51 0.51 0.00 6.46
151 152 0.536006 ATTAGGGCATTCAGAGCGGC 60.536 55.000 0.00 0.00 0.00 6.53
152 153 1.517242 GATTAGGGCATTCAGAGCGG 58.483 55.000 0.00 0.00 0.00 5.52
153 154 1.071385 AGGATTAGGGCATTCAGAGCG 59.929 52.381 0.00 0.00 0.00 5.03
154 155 2.105477 TCAGGATTAGGGCATTCAGAGC 59.895 50.000 0.00 0.00 0.00 4.09
155 156 4.565236 GGATCAGGATTAGGGCATTCAGAG 60.565 50.000 0.00 0.00 0.00 3.35
156 157 3.328931 GGATCAGGATTAGGGCATTCAGA 59.671 47.826 0.00 0.00 0.00 3.27
157 158 3.560882 GGGATCAGGATTAGGGCATTCAG 60.561 52.174 0.00 0.00 0.00 3.02
158 159 2.376518 GGGATCAGGATTAGGGCATTCA 59.623 50.000 0.00 0.00 0.00 2.57
159 160 2.376518 TGGGATCAGGATTAGGGCATTC 59.623 50.000 0.00 0.00 0.00 2.67
160 161 2.431997 TGGGATCAGGATTAGGGCATT 58.568 47.619 0.00 0.00 0.00 3.56
161 162 2.138535 TGGGATCAGGATTAGGGCAT 57.861 50.000 0.00 0.00 0.00 4.40
162 163 1.905839 TTGGGATCAGGATTAGGGCA 58.094 50.000 0.00 0.00 0.00 5.36
163 164 2.587522 GTTTGGGATCAGGATTAGGGC 58.412 52.381 0.00 0.00 0.00 5.19
164 165 2.438021 TCGTTTGGGATCAGGATTAGGG 59.562 50.000 0.00 0.00 0.00 3.53
165 166 3.495100 CCTCGTTTGGGATCAGGATTAGG 60.495 52.174 0.00 0.00 0.00 2.69
166 167 3.733337 CCTCGTTTGGGATCAGGATTAG 58.267 50.000 0.00 0.00 0.00 1.73
167 168 2.158813 GCCTCGTTTGGGATCAGGATTA 60.159 50.000 0.00 0.00 0.00 1.75
168 169 1.408822 GCCTCGTTTGGGATCAGGATT 60.409 52.381 0.00 0.00 0.00 3.01
169 170 0.181350 GCCTCGTTTGGGATCAGGAT 59.819 55.000 0.00 0.00 0.00 3.24
170 171 1.602237 GCCTCGTTTGGGATCAGGA 59.398 57.895 0.00 0.00 0.00 3.86
171 172 1.452108 GGCCTCGTTTGGGATCAGG 60.452 63.158 0.00 0.00 0.00 3.86
172 173 1.452108 GGGCCTCGTTTGGGATCAG 60.452 63.158 0.84 0.00 0.00 2.90
173 174 2.674754 GGGCCTCGTTTGGGATCA 59.325 61.111 0.84 0.00 0.00 2.92
174 175 2.325393 ATCGGGCCTCGTTTGGGATC 62.325 60.000 0.84 0.00 40.32 3.36
175 176 2.375345 ATCGGGCCTCGTTTGGGAT 61.375 57.895 0.84 0.00 40.32 3.85
176 177 3.006728 ATCGGGCCTCGTTTGGGA 61.007 61.111 0.84 0.00 40.32 4.37
177 178 2.608970 ATCATCGGGCCTCGTTTGGG 62.609 60.000 0.84 0.00 40.32 4.12
178 179 1.153168 ATCATCGGGCCTCGTTTGG 60.153 57.895 0.84 0.00 40.32 3.28
179 180 0.744414 ACATCATCGGGCCTCGTTTG 60.744 55.000 0.84 7.69 40.32 2.93
180 181 0.462047 GACATCATCGGGCCTCGTTT 60.462 55.000 0.84 0.00 40.32 3.60
181 182 1.144057 GACATCATCGGGCCTCGTT 59.856 57.895 0.84 0.00 40.32 3.85
182 183 0.467474 TAGACATCATCGGGCCTCGT 60.467 55.000 0.84 0.00 40.32 4.18
183 184 0.242286 CTAGACATCATCGGGCCTCG 59.758 60.000 0.84 4.76 40.90 4.63
184 185 0.605589 CCTAGACATCATCGGGCCTC 59.394 60.000 0.84 0.00 0.00 4.70
185 186 0.833834 CCCTAGACATCATCGGGCCT 60.834 60.000 0.84 0.00 0.00 5.19
186 187 0.832135 TCCCTAGACATCATCGGGCC 60.832 60.000 0.00 0.00 34.84 5.80
187 188 1.001406 CTTCCCTAGACATCATCGGGC 59.999 57.143 0.00 0.00 34.84 6.13
188 189 2.036475 CACTTCCCTAGACATCATCGGG 59.964 54.545 0.00 0.00 36.21 5.14
189 190 2.036475 CCACTTCCCTAGACATCATCGG 59.964 54.545 0.00 0.00 0.00 4.18
190 191 2.546795 GCCACTTCCCTAGACATCATCG 60.547 54.545 0.00 0.00 0.00 3.84
191 192 2.224402 GGCCACTTCCCTAGACATCATC 60.224 54.545 0.00 0.00 0.00 2.92
192 193 1.771255 GGCCACTTCCCTAGACATCAT 59.229 52.381 0.00 0.00 0.00 2.45
193 194 1.204146 GGCCACTTCCCTAGACATCA 58.796 55.000 0.00 0.00 0.00 3.07
194 195 1.204146 TGGCCACTTCCCTAGACATC 58.796 55.000 0.00 0.00 0.00 3.06
195 196 1.492176 CATGGCCACTTCCCTAGACAT 59.508 52.381 8.16 0.00 0.00 3.06
196 197 0.911769 CATGGCCACTTCCCTAGACA 59.088 55.000 8.16 0.00 0.00 3.41
197 198 0.912486 ACATGGCCACTTCCCTAGAC 59.088 55.000 8.16 0.00 0.00 2.59
198 199 1.281867 CAACATGGCCACTTCCCTAGA 59.718 52.381 8.16 0.00 0.00 2.43
199 200 1.683011 CCAACATGGCCACTTCCCTAG 60.683 57.143 8.16 0.00 0.00 3.02
200 201 0.331278 CCAACATGGCCACTTCCCTA 59.669 55.000 8.16 0.00 0.00 3.53
201 202 1.077265 CCAACATGGCCACTTCCCT 59.923 57.895 8.16 0.00 0.00 4.20
202 203 0.967380 CTCCAACATGGCCACTTCCC 60.967 60.000 8.16 0.00 37.47 3.97
203 204 0.251341 ACTCCAACATGGCCACTTCC 60.251 55.000 8.16 0.00 37.47 3.46
204 205 0.883833 CACTCCAACATGGCCACTTC 59.116 55.000 8.16 0.00 37.47 3.01
205 206 0.540365 CCACTCCAACATGGCCACTT 60.540 55.000 8.16 0.00 37.47 3.16
206 207 1.075482 CCACTCCAACATGGCCACT 59.925 57.895 8.16 0.00 37.47 4.00
207 208 1.978617 CCCACTCCAACATGGCCAC 60.979 63.158 8.16 0.00 37.47 5.01
208 209 2.440147 CCCACTCCAACATGGCCA 59.560 61.111 8.56 8.56 37.47 5.36
209 210 2.362889 CCCCACTCCAACATGGCC 60.363 66.667 0.00 0.00 37.47 5.36
210 211 2.362889 CCCCCACTCCAACATGGC 60.363 66.667 0.00 0.00 37.47 4.40
211 212 1.304381 CACCCCCACTCCAACATGG 60.304 63.158 0.00 0.00 39.43 3.66
212 213 0.895100 CACACCCCCACTCCAACATG 60.895 60.000 0.00 0.00 0.00 3.21
213 214 1.460255 CACACCCCCACTCCAACAT 59.540 57.895 0.00 0.00 0.00 2.71
214 215 2.923035 CACACCCCCACTCCAACA 59.077 61.111 0.00 0.00 0.00 3.33
215 216 2.597510 GCACACCCCCACTCCAAC 60.598 66.667 0.00 0.00 0.00 3.77
216 217 2.776526 AGCACACCCCCACTCCAA 60.777 61.111 0.00 0.00 0.00 3.53
217 218 3.249189 GAGCACACCCCCACTCCA 61.249 66.667 0.00 0.00 0.00 3.86
218 219 4.035102 GGAGCACACCCCCACTCC 62.035 72.222 0.00 0.00 41.81 3.85
219 220 1.612442 TAGGAGCACACCCCCACTC 60.612 63.158 0.00 0.00 0.00 3.51
220 221 1.918800 GTAGGAGCACACCCCCACT 60.919 63.158 0.00 0.00 0.00 4.00
221 222 1.918800 AGTAGGAGCACACCCCCAC 60.919 63.158 0.00 0.00 0.00 4.61
222 223 1.918293 CAGTAGGAGCACACCCCCA 60.918 63.158 0.00 0.00 0.00 4.96
223 224 1.489560 AACAGTAGGAGCACACCCCC 61.490 60.000 0.00 0.00 0.00 5.40
224 225 0.321653 CAACAGTAGGAGCACACCCC 60.322 60.000 0.00 0.00 0.00 4.95
225 226 0.321653 CCAACAGTAGGAGCACACCC 60.322 60.000 0.00 0.00 0.00 4.61
226 227 0.396811 ACCAACAGTAGGAGCACACC 59.603 55.000 0.00 0.00 0.00 4.16
227 228 1.512926 CACCAACAGTAGGAGCACAC 58.487 55.000 0.00 0.00 0.00 3.82
228 229 0.396435 CCACCAACAGTAGGAGCACA 59.604 55.000 0.00 0.00 0.00 4.57
229 230 0.955919 GCCACCAACAGTAGGAGCAC 60.956 60.000 0.00 0.00 0.00 4.40
230 231 1.374947 GCCACCAACAGTAGGAGCA 59.625 57.895 0.00 0.00 0.00 4.26
231 232 0.250727 TTGCCACCAACAGTAGGAGC 60.251 55.000 0.00 0.00 0.00 4.70
240 241 0.524604 GTTGACACGTTGCCACCAAC 60.525 55.000 0.00 0.00 46.15 3.77
241 242 0.960861 TGTTGACACGTTGCCACCAA 60.961 50.000 0.00 0.00 0.00 3.67
242 243 0.960861 TTGTTGACACGTTGCCACCA 60.961 50.000 0.00 0.00 0.00 4.17
243 244 0.171455 TTTGTTGACACGTTGCCACC 59.829 50.000 0.00 0.00 0.00 4.61
244 245 1.917303 CTTTTGTTGACACGTTGCCAC 59.083 47.619 0.00 0.00 0.00 5.01
245 246 1.813178 TCTTTTGTTGACACGTTGCCA 59.187 42.857 0.00 0.00 0.00 4.92
246 247 2.450160 CTCTTTTGTTGACACGTTGCC 58.550 47.619 0.00 0.00 0.00 4.52
247 248 1.846175 GCTCTTTTGTTGACACGTTGC 59.154 47.619 0.00 0.00 0.00 4.17
248 249 2.845967 GTGCTCTTTTGTTGACACGTTG 59.154 45.455 0.00 0.00 0.00 4.10
249 250 2.159435 GGTGCTCTTTTGTTGACACGTT 60.159 45.455 0.00 0.00 0.00 3.99
250 251 1.400494 GGTGCTCTTTTGTTGACACGT 59.600 47.619 0.00 0.00 0.00 4.49
251 252 1.400142 TGGTGCTCTTTTGTTGACACG 59.600 47.619 0.00 0.00 0.00 4.49
252 253 3.374745 CATGGTGCTCTTTTGTTGACAC 58.625 45.455 0.00 0.00 0.00 3.67
253 254 2.223782 GCATGGTGCTCTTTTGTTGACA 60.224 45.455 0.00 0.00 40.96 3.58
254 255 2.223782 TGCATGGTGCTCTTTTGTTGAC 60.224 45.455 3.41 0.00 45.31 3.18
255 256 2.030371 TGCATGGTGCTCTTTTGTTGA 58.970 42.857 3.41 0.00 45.31 3.18
256 257 2.512485 TGCATGGTGCTCTTTTGTTG 57.488 45.000 3.41 0.00 45.31 3.33
257 258 3.181463 ACAATGCATGGTGCTCTTTTGTT 60.181 39.130 5.74 0.00 45.31 2.83
258 259 2.366266 ACAATGCATGGTGCTCTTTTGT 59.634 40.909 5.74 0.00 45.31 2.83
259 260 3.034721 ACAATGCATGGTGCTCTTTTG 57.965 42.857 5.74 0.00 45.31 2.44
260 261 4.870123 TTACAATGCATGGTGCTCTTTT 57.130 36.364 17.42 0.00 45.31 2.27
261 262 4.870123 TTTACAATGCATGGTGCTCTTT 57.130 36.364 17.42 0.00 45.31 2.52
262 263 4.870123 TTTTACAATGCATGGTGCTCTT 57.130 36.364 17.42 0.00 45.31 2.85
263 264 4.708421 AGATTTTACAATGCATGGTGCTCT 59.292 37.500 17.42 9.80 45.31 4.09
264 265 5.002464 AGATTTTACAATGCATGGTGCTC 57.998 39.130 17.42 7.81 45.31 4.26
265 266 5.410355 AAGATTTTACAATGCATGGTGCT 57.590 34.783 17.42 3.63 45.31 4.40
266 267 6.035975 GGTAAAGATTTTACAATGCATGGTGC 59.964 38.462 17.42 1.39 45.29 5.01
267 268 7.322664 AGGTAAAGATTTTACAATGCATGGTG 58.677 34.615 17.42 6.92 0.00 4.17
268 269 7.480760 AGGTAAAGATTTTACAATGCATGGT 57.519 32.000 12.36 12.36 0.00 3.55
269 270 8.253113 AGAAGGTAAAGATTTTACAATGCATGG 58.747 33.333 0.00 0.00 0.00 3.66
272 273 8.458843 GCTAGAAGGTAAAGATTTTACAATGCA 58.541 33.333 12.26 0.00 0.00 3.96
273 274 7.915923 GGCTAGAAGGTAAAGATTTTACAATGC 59.084 37.037 12.26 7.78 0.00 3.56
274 275 8.956426 TGGCTAGAAGGTAAAGATTTTACAATG 58.044 33.333 12.26 0.00 0.00 2.82
275 276 9.700831 ATGGCTAGAAGGTAAAGATTTTACAAT 57.299 29.630 12.26 2.39 0.00 2.71
276 277 9.174166 GATGGCTAGAAGGTAAAGATTTTACAA 57.826 33.333 12.26 0.00 0.00 2.41
277 278 8.325787 TGATGGCTAGAAGGTAAAGATTTTACA 58.674 33.333 12.26 0.00 0.00 2.41
278 279 8.732746 TGATGGCTAGAAGGTAAAGATTTTAC 57.267 34.615 0.00 3.67 0.00 2.01
284 285 9.920946 AAAAATATGATGGCTAGAAGGTAAAGA 57.079 29.630 0.00 0.00 0.00 2.52
285 286 9.956720 CAAAAATATGATGGCTAGAAGGTAAAG 57.043 33.333 0.00 0.00 0.00 1.85
286 287 9.693739 TCAAAAATATGATGGCTAGAAGGTAAA 57.306 29.630 0.00 0.00 0.00 2.01
287 288 9.693739 TTCAAAAATATGATGGCTAGAAGGTAA 57.306 29.630 0.00 0.00 0.00 2.85
288 289 9.342308 CTTCAAAAATATGATGGCTAGAAGGTA 57.658 33.333 0.00 0.00 0.00 3.08
289 290 7.836183 ACTTCAAAAATATGATGGCTAGAAGGT 59.164 33.333 0.00 0.00 34.61 3.50
290 291 8.133627 CACTTCAAAAATATGATGGCTAGAAGG 58.866 37.037 0.00 0.00 34.61 3.46
291 292 8.133627 CCACTTCAAAAATATGATGGCTAGAAG 58.866 37.037 0.00 0.00 35.96 2.85
292 293 7.068593 CCCACTTCAAAAATATGATGGCTAGAA 59.931 37.037 0.00 0.00 31.10 2.10
293 294 6.547141 CCCACTTCAAAAATATGATGGCTAGA 59.453 38.462 0.00 0.00 31.10 2.43
294 295 6.547141 TCCCACTTCAAAAATATGATGGCTAG 59.453 38.462 0.00 0.00 31.10 3.42
295 296 6.430864 TCCCACTTCAAAAATATGATGGCTA 58.569 36.000 0.00 0.00 31.10 3.93
296 297 5.271598 TCCCACTTCAAAAATATGATGGCT 58.728 37.500 0.00 0.00 31.10 4.75
297 298 5.596836 TCCCACTTCAAAAATATGATGGC 57.403 39.130 0.00 0.00 31.10 4.40
298 299 7.614494 ACTTTCCCACTTCAAAAATATGATGG 58.386 34.615 0.00 0.00 31.89 3.51
299 300 9.492973 AAACTTTCCCACTTCAAAAATATGATG 57.507 29.630 0.00 0.00 0.00 3.07
333 334 9.813826 CCTCCAGAATCCCTATTAACATTAATT 57.186 33.333 2.34 0.00 35.20 1.40
334 335 9.182642 TCCTCCAGAATCCCTATTAACATTAAT 57.817 33.333 2.60 2.60 37.19 1.40
335 336 8.575736 TCCTCCAGAATCCCTATTAACATTAA 57.424 34.615 0.00 0.00 0.00 1.40
336 337 8.016652 TCTCCTCCAGAATCCCTATTAACATTA 58.983 37.037 0.00 0.00 0.00 1.90
337 338 6.851836 TCTCCTCCAGAATCCCTATTAACATT 59.148 38.462 0.00 0.00 0.00 2.71
338 339 6.393897 TCTCCTCCAGAATCCCTATTAACAT 58.606 40.000 0.00 0.00 0.00 2.71
339 340 5.788430 TCTCCTCCAGAATCCCTATTAACA 58.212 41.667 0.00 0.00 0.00 2.41
340 341 6.078664 TCTCTCCTCCAGAATCCCTATTAAC 58.921 44.000 0.00 0.00 0.00 2.01
341 342 6.295041 TCTCTCCTCCAGAATCCCTATTAA 57.705 41.667 0.00 0.00 0.00 1.40
342 343 5.950320 TCTCTCCTCCAGAATCCCTATTA 57.050 43.478 0.00 0.00 0.00 0.98
343 344 4.841813 TCTCTCCTCCAGAATCCCTATT 57.158 45.455 0.00 0.00 0.00 1.73
344 345 4.841813 TTCTCTCCTCCAGAATCCCTAT 57.158 45.455 0.00 0.00 0.00 2.57
345 346 4.233053 TCTTTCTCTCCTCCAGAATCCCTA 59.767 45.833 0.00 0.00 29.89 3.53
346 347 3.013417 TCTTTCTCTCCTCCAGAATCCCT 59.987 47.826 0.00 0.00 29.89 4.20
347 348 3.379452 TCTTTCTCTCCTCCAGAATCCC 58.621 50.000 0.00 0.00 29.89 3.85
348 349 3.387699 CCTCTTTCTCTCCTCCAGAATCC 59.612 52.174 0.00 0.00 29.89 3.01
349 350 4.099419 GTCCTCTTTCTCTCCTCCAGAATC 59.901 50.000 0.00 0.00 29.89 2.52
350 351 4.030216 GTCCTCTTTCTCTCCTCCAGAAT 58.970 47.826 0.00 0.00 29.89 2.40
351 352 3.181417 TGTCCTCTTTCTCTCCTCCAGAA 60.181 47.826 0.00 0.00 0.00 3.02
352 353 2.380249 TGTCCTCTTTCTCTCCTCCAGA 59.620 50.000 0.00 0.00 0.00 3.86
353 354 2.495669 GTGTCCTCTTTCTCTCCTCCAG 59.504 54.545 0.00 0.00 0.00 3.86
354 355 2.110899 AGTGTCCTCTTTCTCTCCTCCA 59.889 50.000 0.00 0.00 0.00 3.86
355 356 2.815158 AGTGTCCTCTTTCTCTCCTCC 58.185 52.381 0.00 0.00 0.00 4.30
356 357 3.951680 CCTAGTGTCCTCTTTCTCTCCTC 59.048 52.174 0.00 0.00 0.00 3.71
357 358 3.309556 CCCTAGTGTCCTCTTTCTCTCCT 60.310 52.174 0.00 0.00 0.00 3.69
358 359 3.028130 CCCTAGTGTCCTCTTTCTCTCC 58.972 54.545 0.00 0.00 0.00 3.71
359 360 2.429250 GCCCTAGTGTCCTCTTTCTCTC 59.571 54.545 0.00 0.00 0.00 3.20
360 361 2.225394 TGCCCTAGTGTCCTCTTTCTCT 60.225 50.000 0.00 0.00 0.00 3.10
361 362 2.180276 TGCCCTAGTGTCCTCTTTCTC 58.820 52.381 0.00 0.00 0.00 2.87
362 363 2.327325 TGCCCTAGTGTCCTCTTTCT 57.673 50.000 0.00 0.00 0.00 2.52
363 364 2.567615 TCTTGCCCTAGTGTCCTCTTTC 59.432 50.000 0.00 0.00 0.00 2.62
364 365 2.303311 GTCTTGCCCTAGTGTCCTCTTT 59.697 50.000 0.00 0.00 0.00 2.52
365 366 1.903183 GTCTTGCCCTAGTGTCCTCTT 59.097 52.381 0.00 0.00 0.00 2.85
366 367 1.203187 TGTCTTGCCCTAGTGTCCTCT 60.203 52.381 0.00 0.00 0.00 3.69
367 368 1.267121 TGTCTTGCCCTAGTGTCCTC 58.733 55.000 0.00 0.00 0.00 3.71
368 369 1.729586 TTGTCTTGCCCTAGTGTCCT 58.270 50.000 0.00 0.00 0.00 3.85
369 370 2.152016 GTTTGTCTTGCCCTAGTGTCC 58.848 52.381 0.00 0.00 0.00 4.02
370 371 1.798813 CGTTTGTCTTGCCCTAGTGTC 59.201 52.381 0.00 0.00 0.00 3.67
371 372 1.542547 CCGTTTGTCTTGCCCTAGTGT 60.543 52.381 0.00 0.00 0.00 3.55
372 373 1.156736 CCGTTTGTCTTGCCCTAGTG 58.843 55.000 0.00 0.00 0.00 2.74
373 374 1.053424 TCCGTTTGTCTTGCCCTAGT 58.947 50.000 0.00 0.00 0.00 2.57
374 375 2.178912 TTCCGTTTGTCTTGCCCTAG 57.821 50.000 0.00 0.00 0.00 3.02
375 376 2.642154 TTTCCGTTTGTCTTGCCCTA 57.358 45.000 0.00 0.00 0.00 3.53
376 377 1.995376 ATTTCCGTTTGTCTTGCCCT 58.005 45.000 0.00 0.00 0.00 5.19
377 378 3.254903 ACTTATTTCCGTTTGTCTTGCCC 59.745 43.478 0.00 0.00 0.00 5.36
378 379 4.226761 CACTTATTTCCGTTTGTCTTGCC 58.773 43.478 0.00 0.00 0.00 4.52
379 380 4.023536 TCCACTTATTTCCGTTTGTCTTGC 60.024 41.667 0.00 0.00 0.00 4.01
380 381 5.449304 GTCCACTTATTTCCGTTTGTCTTG 58.551 41.667 0.00 0.00 0.00 3.02
381 382 4.517832 GGTCCACTTATTTCCGTTTGTCTT 59.482 41.667 0.00 0.00 0.00 3.01
382 383 4.070009 GGTCCACTTATTTCCGTTTGTCT 58.930 43.478 0.00 0.00 0.00 3.41
383 384 3.189910 GGGTCCACTTATTTCCGTTTGTC 59.810 47.826 0.00 0.00 0.00 3.18
384 385 3.151554 GGGTCCACTTATTTCCGTTTGT 58.848 45.455 0.00 0.00 0.00 2.83
385 386 3.150767 TGGGTCCACTTATTTCCGTTTG 58.849 45.455 0.00 0.00 0.00 2.93
386 387 3.512219 TGGGTCCACTTATTTCCGTTT 57.488 42.857 0.00 0.00 0.00 3.60
387 388 3.352648 CATGGGTCCACTTATTTCCGTT 58.647 45.455 0.00 0.00 0.00 4.44
388 389 2.356741 CCATGGGTCCACTTATTTCCGT 60.357 50.000 2.85 0.00 0.00 4.69
389 390 2.297701 CCATGGGTCCACTTATTTCCG 58.702 52.381 2.85 0.00 0.00 4.30
390 391 2.243736 TCCCATGGGTCCACTTATTTCC 59.756 50.000 30.28 0.00 36.47 3.13
391 392 3.662759 TCCCATGGGTCCACTTATTTC 57.337 47.619 30.28 0.00 36.47 2.17
392 393 3.708451 GTTCCCATGGGTCCACTTATTT 58.292 45.455 30.28 0.00 36.47 1.40
393 394 2.356741 CGTTCCCATGGGTCCACTTATT 60.357 50.000 30.28 0.00 36.47 1.40
394 395 1.211949 CGTTCCCATGGGTCCACTTAT 59.788 52.381 30.28 0.00 36.47 1.73
395 396 0.616371 CGTTCCCATGGGTCCACTTA 59.384 55.000 30.28 6.30 36.47 2.24
396 397 1.131303 TCGTTCCCATGGGTCCACTT 61.131 55.000 30.28 0.00 36.47 3.16
397 398 1.131303 TTCGTTCCCATGGGTCCACT 61.131 55.000 30.28 0.00 36.47 4.00
398 399 0.250989 TTTCGTTCCCATGGGTCCAC 60.251 55.000 30.28 22.17 36.47 4.02
399 400 0.478942 TTTTCGTTCCCATGGGTCCA 59.521 50.000 30.28 13.06 36.47 4.02
400 401 1.847328 ATTTTCGTTCCCATGGGTCC 58.153 50.000 30.28 19.69 36.47 4.46
401 402 5.348164 CATTTATTTTCGTTCCCATGGGTC 58.652 41.667 30.28 21.71 36.47 4.46
402 403 4.161377 CCATTTATTTTCGTTCCCATGGGT 59.839 41.667 30.28 11.10 36.47 4.51
403 404 4.404073 TCCATTTATTTTCGTTCCCATGGG 59.596 41.667 26.30 26.30 32.32 4.00
404 405 5.348164 GTCCATTTATTTTCGTTCCCATGG 58.652 41.667 4.14 4.14 32.65 3.66
405 406 5.034152 CGTCCATTTATTTTCGTTCCCATG 58.966 41.667 0.00 0.00 0.00 3.66
406 407 4.439563 GCGTCCATTTATTTTCGTTCCCAT 60.440 41.667 0.00 0.00 0.00 4.00
407 408 3.119779 GCGTCCATTTATTTTCGTTCCCA 60.120 43.478 0.00 0.00 0.00 4.37
408 409 3.119779 TGCGTCCATTTATTTTCGTTCCC 60.120 43.478 0.00 0.00 0.00 3.97
409 410 4.086199 TGCGTCCATTTATTTTCGTTCC 57.914 40.909 0.00 0.00 0.00 3.62
410 411 6.711579 TCTATGCGTCCATTTATTTTCGTTC 58.288 36.000 0.00 0.00 32.85 3.95
411 412 6.671614 TCTATGCGTCCATTTATTTTCGTT 57.328 33.333 0.00 0.00 32.85 3.85
412 413 6.483687 GTTCTATGCGTCCATTTATTTTCGT 58.516 36.000 0.00 0.00 32.85 3.85
413 414 5.615581 CGTTCTATGCGTCCATTTATTTTCG 59.384 40.000 0.00 0.00 32.85 3.46
414 415 5.907391 CCGTTCTATGCGTCCATTTATTTTC 59.093 40.000 0.00 0.00 32.85 2.29
415 416 5.220970 CCCGTTCTATGCGTCCATTTATTTT 60.221 40.000 0.00 0.00 32.85 1.82
416 417 4.274950 CCCGTTCTATGCGTCCATTTATTT 59.725 41.667 0.00 0.00 32.85 1.40
417 418 3.813166 CCCGTTCTATGCGTCCATTTATT 59.187 43.478 0.00 0.00 32.85 1.40
418 419 3.399330 CCCGTTCTATGCGTCCATTTAT 58.601 45.455 0.00 0.00 32.85 1.40
419 420 2.484065 CCCCGTTCTATGCGTCCATTTA 60.484 50.000 0.00 0.00 32.85 1.40
420 421 1.663695 CCCGTTCTATGCGTCCATTT 58.336 50.000 0.00 0.00 32.85 2.32
421 422 0.179056 CCCCGTTCTATGCGTCCATT 60.179 55.000 0.00 0.00 32.85 3.16
422 423 1.335132 ACCCCGTTCTATGCGTCCAT 61.335 55.000 0.00 0.00 35.44 3.41
423 424 0.683828 TACCCCGTTCTATGCGTCCA 60.684 55.000 0.00 0.00 0.00 4.02
424 425 0.461135 TTACCCCGTTCTATGCGTCC 59.539 55.000 0.00 0.00 0.00 4.79
425 426 1.135024 TGTTACCCCGTTCTATGCGTC 60.135 52.381 0.00 0.00 0.00 5.19
426 427 0.896923 TGTTACCCCGTTCTATGCGT 59.103 50.000 0.00 0.00 0.00 5.24
427 428 2.012937 TTGTTACCCCGTTCTATGCG 57.987 50.000 0.00 0.00 0.00 4.73
428 429 4.201980 GGAAATTGTTACCCCGTTCTATGC 60.202 45.833 0.00 0.00 0.00 3.14
429 430 4.337274 GGGAAATTGTTACCCCGTTCTATG 59.663 45.833 0.00 0.00 37.85 2.23
430 431 4.529897 GGGAAATTGTTACCCCGTTCTAT 58.470 43.478 0.00 0.00 37.85 1.98
431 432 3.954200 GGGAAATTGTTACCCCGTTCTA 58.046 45.455 0.00 0.00 37.85 2.10
432 433 2.799017 GGGAAATTGTTACCCCGTTCT 58.201 47.619 0.00 0.00 37.85 3.01
437 438 1.913778 ACACGGGAAATTGTTACCCC 58.086 50.000 0.00 0.00 40.43 4.95
438 439 4.424061 GTAACACGGGAAATTGTTACCC 57.576 45.455 11.79 0.00 46.62 3.69
441 442 4.554330 GCGTTGTAACACGGGAAATTGTTA 60.554 41.667 0.00 0.00 40.69 2.41
442 443 3.792794 GCGTTGTAACACGGGAAATTGTT 60.793 43.478 0.00 0.00 40.69 2.83
443 444 2.287129 GCGTTGTAACACGGGAAATTGT 60.287 45.455 0.00 0.00 40.69 2.71
444 445 2.287069 TGCGTTGTAACACGGGAAATTG 60.287 45.455 0.00 0.00 40.69 2.32
445 446 1.948145 TGCGTTGTAACACGGGAAATT 59.052 42.857 0.00 0.00 40.69 1.82
446 447 1.264826 GTGCGTTGTAACACGGGAAAT 59.735 47.619 0.00 0.00 40.69 2.17
447 448 0.656785 GTGCGTTGTAACACGGGAAA 59.343 50.000 0.00 0.00 40.69 3.13
448 449 2.309326 GTGCGTTGTAACACGGGAA 58.691 52.632 0.00 0.00 40.69 3.97
449 450 4.030821 GTGCGTTGTAACACGGGA 57.969 55.556 0.00 0.00 40.69 5.14
453 454 0.863144 ATGTCCGTGCGTTGTAACAC 59.137 50.000 0.00 0.00 0.00 3.32
454 455 1.584175 AATGTCCGTGCGTTGTAACA 58.416 45.000 0.00 0.00 0.00 2.41
455 456 2.286536 ACAAATGTCCGTGCGTTGTAAC 60.287 45.455 0.00 0.00 0.00 2.50
456 457 1.941294 ACAAATGTCCGTGCGTTGTAA 59.059 42.857 0.00 0.00 0.00 2.41
457 458 1.261885 CACAAATGTCCGTGCGTTGTA 59.738 47.619 0.00 0.00 0.00 2.41
458 459 0.028770 CACAAATGTCCGTGCGTTGT 59.971 50.000 0.00 0.00 0.00 3.32
459 460 2.782171 CACAAATGTCCGTGCGTTG 58.218 52.632 0.00 0.00 0.00 4.10
464 465 2.671396 GGTACTAGCACAAATGTCCGTG 59.329 50.000 0.00 0.00 36.18 4.94
465 466 2.673043 CGGTACTAGCACAAATGTCCGT 60.673 50.000 0.00 0.00 0.00 4.69
466 467 1.924524 CGGTACTAGCACAAATGTCCG 59.075 52.381 0.00 0.00 0.00 4.79
467 468 3.187700 CTCGGTACTAGCACAAATGTCC 58.812 50.000 0.00 0.00 0.00 4.02
468 469 3.846360 ACTCGGTACTAGCACAAATGTC 58.154 45.455 0.00 0.00 0.00 3.06
469 470 3.955650 ACTCGGTACTAGCACAAATGT 57.044 42.857 0.00 0.00 0.00 2.71
470 471 6.903883 ATTTACTCGGTACTAGCACAAATG 57.096 37.500 0.00 0.00 0.00 2.32
471 472 7.328737 AGAATTTACTCGGTACTAGCACAAAT 58.671 34.615 0.00 0.00 0.00 2.32
472 473 6.694447 AGAATTTACTCGGTACTAGCACAAA 58.306 36.000 0.00 0.00 0.00 2.83
473 474 6.276832 AGAATTTACTCGGTACTAGCACAA 57.723 37.500 0.00 0.00 0.00 3.33
474 475 5.909621 AGAATTTACTCGGTACTAGCACA 57.090 39.130 0.00 0.00 0.00 4.57
475 476 7.592439 AAAAGAATTTACTCGGTACTAGCAC 57.408 36.000 0.00 0.00 37.28 4.40
498 499 1.658994 CCCGTATCCGCAGCTAAAAA 58.341 50.000 0.00 0.00 0.00 1.94
499 500 0.179067 CCCCGTATCCGCAGCTAAAA 60.179 55.000 0.00 0.00 0.00 1.52
500 501 1.044231 TCCCCGTATCCGCAGCTAAA 61.044 55.000 0.00 0.00 0.00 1.85
501 502 1.044231 TTCCCCGTATCCGCAGCTAA 61.044 55.000 0.00 0.00 0.00 3.09
502 503 1.044231 TTTCCCCGTATCCGCAGCTA 61.044 55.000 0.00 0.00 0.00 3.32
503 504 2.311688 CTTTCCCCGTATCCGCAGCT 62.312 60.000 0.00 0.00 0.00 4.24
504 505 1.887707 CTTTCCCCGTATCCGCAGC 60.888 63.158 0.00 0.00 0.00 5.25
505 506 0.748450 TACTTTCCCCGTATCCGCAG 59.252 55.000 0.00 0.00 0.00 5.18
506 507 1.342174 GATACTTTCCCCGTATCCGCA 59.658 52.381 0.00 0.00 38.05 5.69
507 508 1.617357 AGATACTTTCCCCGTATCCGC 59.383 52.381 6.57 0.00 42.54 5.54
508 509 4.614535 CGTTAGATACTTTCCCCGTATCCG 60.615 50.000 6.57 1.47 42.54 4.18
509 510 4.279420 ACGTTAGATACTTTCCCCGTATCC 59.721 45.833 6.57 0.00 42.54 2.59
510 511 5.444663 ACGTTAGATACTTTCCCCGTATC 57.555 43.478 0.00 0.00 42.11 2.24
511 512 5.452356 CCAACGTTAGATACTTTCCCCGTAT 60.452 44.000 0.00 0.00 0.00 3.06
512 513 4.142182 CCAACGTTAGATACTTTCCCCGTA 60.142 45.833 0.00 0.00 0.00 4.02
513 514 3.368739 CCAACGTTAGATACTTTCCCCGT 60.369 47.826 0.00 0.00 0.00 5.28
514 515 3.119029 TCCAACGTTAGATACTTTCCCCG 60.119 47.826 0.00 0.00 0.00 5.73
515 516 4.476628 TCCAACGTTAGATACTTTCCCC 57.523 45.455 0.00 0.00 0.00 4.81
516 517 7.384387 GTCATATCCAACGTTAGATACTTTCCC 59.616 40.741 16.93 1.73 0.00 3.97
517 518 7.114529 CGTCATATCCAACGTTAGATACTTTCC 59.885 40.741 16.93 5.13 34.30 3.13
518 519 7.859377 TCGTCATATCCAACGTTAGATACTTTC 59.141 37.037 16.93 8.52 39.78 2.62
519 520 7.709947 TCGTCATATCCAACGTTAGATACTTT 58.290 34.615 16.93 1.24 39.78 2.66
520 521 7.013083 ACTCGTCATATCCAACGTTAGATACTT 59.987 37.037 16.93 1.90 39.78 2.24
521 522 6.485984 ACTCGTCATATCCAACGTTAGATACT 59.514 38.462 16.93 5.92 39.78 2.12
522 523 6.666417 ACTCGTCATATCCAACGTTAGATAC 58.334 40.000 16.93 8.01 39.78 2.24
523 524 6.872628 ACTCGTCATATCCAACGTTAGATA 57.127 37.500 16.92 16.92 39.78 1.98
524 525 5.769484 ACTCGTCATATCCAACGTTAGAT 57.231 39.130 13.67 13.67 39.78 1.98
525 526 6.489675 GTTACTCGTCATATCCAACGTTAGA 58.510 40.000 0.00 0.00 39.78 2.10
526 527 5.394613 CGTTACTCGTCATATCCAACGTTAG 59.605 44.000 0.00 0.00 39.78 2.34
527 528 5.265477 CGTTACTCGTCATATCCAACGTTA 58.735 41.667 0.00 0.00 39.78 3.18
528 529 4.100529 CGTTACTCGTCATATCCAACGTT 58.899 43.478 0.00 0.00 39.78 3.99
529 530 3.688272 CGTTACTCGTCATATCCAACGT 58.312 45.455 0.00 0.00 39.78 3.99
530 531 2.466571 GCGTTACTCGTCATATCCAACG 59.533 50.000 0.00 0.00 42.13 4.10
531 532 2.793232 GGCGTTACTCGTCATATCCAAC 59.207 50.000 0.00 0.00 44.22 3.77
532 533 2.542205 CGGCGTTACTCGTCATATCCAA 60.542 50.000 0.00 0.00 45.17 3.53
533 534 1.002142 CGGCGTTACTCGTCATATCCA 60.002 52.381 0.00 0.00 45.17 3.41
534 535 1.265095 TCGGCGTTACTCGTCATATCC 59.735 52.381 6.85 0.00 45.17 2.59
535 536 2.675767 TCGGCGTTACTCGTCATATC 57.324 50.000 6.85 0.00 45.17 1.63
536 537 2.542411 GGTTCGGCGTTACTCGTCATAT 60.542 50.000 6.85 0.00 45.17 1.78
537 538 1.202177 GGTTCGGCGTTACTCGTCATA 60.202 52.381 6.85 0.00 45.17 2.15
538 539 0.457337 GGTTCGGCGTTACTCGTCAT 60.457 55.000 6.85 0.00 45.17 3.06
539 540 1.081242 GGTTCGGCGTTACTCGTCA 60.081 57.895 6.85 0.00 45.17 4.35
540 541 1.803117 GGGTTCGGCGTTACTCGTC 60.803 63.158 6.85 0.00 42.13 4.20
541 542 2.086251 TTGGGTTCGGCGTTACTCGT 62.086 55.000 6.85 0.00 42.13 4.18
542 543 1.349259 CTTGGGTTCGGCGTTACTCG 61.349 60.000 6.85 0.00 43.12 4.18
543 544 0.320160 ACTTGGGTTCGGCGTTACTC 60.320 55.000 6.85 7.33 0.00 2.59
544 545 0.968405 TACTTGGGTTCGGCGTTACT 59.032 50.000 6.85 0.00 0.00 2.24
545 546 1.353076 CTACTTGGGTTCGGCGTTAC 58.647 55.000 6.85 6.58 0.00 2.50
546 547 0.390209 GCTACTTGGGTTCGGCGTTA 60.390 55.000 6.85 0.00 0.00 3.18
547 548 1.670083 GCTACTTGGGTTCGGCGTT 60.670 57.895 6.85 0.00 0.00 4.84
548 549 2.047560 GCTACTTGGGTTCGGCGT 60.048 61.111 6.85 0.00 0.00 5.68
549 550 2.047655 TGCTACTTGGGTTCGGCG 60.048 61.111 0.00 0.00 0.00 6.46
550 551 1.745489 CCTGCTACTTGGGTTCGGC 60.745 63.158 0.00 0.00 0.00 5.54
551 552 1.078426 CCCTGCTACTTGGGTTCGG 60.078 63.158 0.00 0.00 38.65 4.30
552 553 1.078426 CCCCTGCTACTTGGGTTCG 60.078 63.158 0.00 0.00 41.82 3.95
553 554 0.696501 TTCCCCTGCTACTTGGGTTC 59.303 55.000 0.00 0.00 41.82 3.62
554 555 1.075536 CTTTCCCCTGCTACTTGGGTT 59.924 52.381 0.00 0.00 41.82 4.11
555 556 0.698818 CTTTCCCCTGCTACTTGGGT 59.301 55.000 0.00 0.00 41.82 4.51
556 557 0.681243 GCTTTCCCCTGCTACTTGGG 60.681 60.000 0.00 0.00 42.98 4.12
557 558 1.026718 CGCTTTCCCCTGCTACTTGG 61.027 60.000 0.00 0.00 0.00 3.61
558 559 1.648467 GCGCTTTCCCCTGCTACTTG 61.648 60.000 0.00 0.00 0.00 3.16
559 560 1.377333 GCGCTTTCCCCTGCTACTT 60.377 57.895 0.00 0.00 0.00 2.24
560 561 2.269241 GCGCTTTCCCCTGCTACT 59.731 61.111 0.00 0.00 0.00 2.57
561 562 3.195698 CGCGCTTTCCCCTGCTAC 61.196 66.667 5.56 0.00 0.00 3.58
562 563 3.371097 CTCGCGCTTTCCCCTGCTA 62.371 63.158 5.56 0.00 0.00 3.49
563 564 4.767255 CTCGCGCTTTCCCCTGCT 62.767 66.667 5.56 0.00 0.00 4.24
577 578 2.831742 TACCAGTAGGGCGGCTCG 60.832 66.667 9.56 0.00 42.05 5.03
578 579 2.794028 GGTACCAGTAGGGCGGCTC 61.794 68.421 7.15 0.00 42.05 4.70
579 580 2.762875 GGTACCAGTAGGGCGGCT 60.763 66.667 7.15 0.00 42.05 5.52
580 581 4.217159 CGGTACCAGTAGGGCGGC 62.217 72.222 13.54 0.00 42.05 6.53
581 582 2.757099 ACGGTACCAGTAGGGCGG 60.757 66.667 13.54 0.00 42.05 6.13
582 583 2.779033 GGACGGTACCAGTAGGGCG 61.779 68.421 13.54 0.00 42.05 6.13
583 584 1.047034 ATGGACGGTACCAGTAGGGC 61.047 60.000 13.54 0.00 43.49 5.19
584 585 1.492764 AATGGACGGTACCAGTAGGG 58.507 55.000 13.54 0.00 43.49 3.53
585 586 4.950205 AATAATGGACGGTACCAGTAGG 57.050 45.455 13.54 0.00 42.33 3.18
586 587 5.537674 ACCTAATAATGGACGGTACCAGTAG 59.462 44.000 13.54 3.33 42.33 2.57
587 588 5.457686 ACCTAATAATGGACGGTACCAGTA 58.542 41.667 13.54 7.81 43.02 2.74
588 589 4.292643 ACCTAATAATGGACGGTACCAGT 58.707 43.478 13.54 10.87 43.49 4.00
589 590 4.950205 ACCTAATAATGGACGGTACCAG 57.050 45.455 13.54 7.45 43.49 4.00
590 591 6.135454 TCTTACCTAATAATGGACGGTACCA 58.865 40.000 13.54 0.00 44.41 3.25
591 592 6.655078 TCTTACCTAATAATGGACGGTACC 57.345 41.667 0.16 0.16 30.49 3.34
592 593 8.947055 TTTTCTTACCTAATAATGGACGGTAC 57.053 34.615 0.00 0.00 30.49 3.34
1216 1217 1.576356 CAAACCCTAGATCTCTGCGC 58.424 55.000 0.00 0.00 0.00 6.09
1255 1256 4.891727 CGCCGGCGCATAACTCCT 62.892 66.667 38.48 0.00 34.03 3.69
1331 1332 3.744719 CCTCGTCCTCGTCGGCAA 61.745 66.667 0.00 0.00 38.33 4.52
1332 1333 3.610619 TACCTCGTCCTCGTCGGCA 62.611 63.158 0.00 0.00 38.33 5.69
1333 1334 2.821366 TACCTCGTCCTCGTCGGC 60.821 66.667 0.00 0.00 38.33 5.54
1519 1523 1.153489 GCTCATCAGCTGCCTCGAA 60.153 57.895 9.47 0.00 43.09 3.71
1846 1850 4.257731 GTTTGCCAGTTTGGAAAGGAAAA 58.742 39.130 0.00 0.00 40.96 2.29
2000 2004 9.722056 CAATTGGTTATAAGATAACAAGTCAGC 57.278 33.333 10.62 0.00 0.00 4.26
2093 2097 1.227205 CAGACCTCATCTCGCTGGC 60.227 63.158 0.00 0.00 34.41 4.85
2128 2132 1.227674 GCTAACTCATGAGGCCCCG 60.228 63.158 26.08 10.74 0.00 5.73
2146 2150 1.725641 TAGCATTCGAGCACAACCTG 58.274 50.000 0.00 0.00 36.85 4.00
2530 2534 0.984230 AGGATCAACTCTTTCCGCCA 59.016 50.000 0.00 0.00 34.61 5.69
2568 2572 1.456296 AGCGCATCATTCACACATGT 58.544 45.000 11.47 0.00 0.00 3.21
2749 2753 0.745845 CAGATTCCCACTTGGCGGAG 60.746 60.000 0.00 0.00 0.00 4.63
2750 2754 1.198094 TCAGATTCCCACTTGGCGGA 61.198 55.000 0.00 0.00 0.00 5.54
2751 2755 0.107017 ATCAGATTCCCACTTGGCGG 60.107 55.000 0.00 0.00 0.00 6.13
2752 2756 2.213499 GTATCAGATTCCCACTTGGCG 58.787 52.381 0.00 0.00 0.00 5.69
2753 2757 2.173569 AGGTATCAGATTCCCACTTGGC 59.826 50.000 2.45 0.00 0.00 4.52
2754 2758 3.813443 CAGGTATCAGATTCCCACTTGG 58.187 50.000 2.45 0.00 0.00 3.61
2755 2759 3.209410 GCAGGTATCAGATTCCCACTTG 58.791 50.000 2.45 0.00 0.00 3.16
2756 2760 2.173569 GGCAGGTATCAGATTCCCACTT 59.826 50.000 2.45 0.00 0.00 3.16
2757 2761 1.771255 GGCAGGTATCAGATTCCCACT 59.229 52.381 2.45 0.00 0.00 4.00
2758 2762 1.771255 AGGCAGGTATCAGATTCCCAC 59.229 52.381 2.45 0.00 0.00 4.61
2759 2763 2.050144 GAGGCAGGTATCAGATTCCCA 58.950 52.381 2.45 0.00 0.00 4.37
2760 2764 1.349357 GGAGGCAGGTATCAGATTCCC 59.651 57.143 2.45 0.00 0.00 3.97
2761 2765 1.349357 GGGAGGCAGGTATCAGATTCC 59.651 57.143 0.00 0.00 0.00 3.01
2762 2766 1.001406 CGGGAGGCAGGTATCAGATTC 59.999 57.143 0.00 0.00 0.00 2.52
2763 2767 1.051812 CGGGAGGCAGGTATCAGATT 58.948 55.000 0.00 0.00 0.00 2.40
3064 3092 4.916870 AGCTCTTTTTAACACGGTTTCAC 58.083 39.130 0.00 0.00 0.00 3.18
3129 3157 7.014808 GGAGCTAATGTTACTTCCATCTCTACT 59.985 40.741 0.00 0.00 0.00 2.57
3254 3282 6.018098 CAGTACTGTCTGGGATACTACTTACG 60.018 46.154 15.06 0.00 0.00 3.18
3299 3327 3.010420 GGTCTGTGGAACTGAATTAGGC 58.990 50.000 0.00 0.00 46.54 3.93
3347 3375 1.201921 GCGATGTCCTTTAACACTGCG 60.202 52.381 0.00 0.00 30.55 5.18
3365 3393 2.029073 ACAGTCGGGTTCACAGCG 59.971 61.111 0.00 0.00 0.00 5.18
3452 3480 8.819845 ACATTATTGATCATGCCACTAGAGATA 58.180 33.333 0.00 0.00 0.00 1.98
3753 3786 4.708726 CCAGGAATTGGCACTAAAAGAG 57.291 45.455 0.00 0.00 40.87 2.85
3786 3819 3.192001 CAGCAAAACATATGGTCAGTGCT 59.808 43.478 16.71 16.71 39.79 4.40
3787 3820 3.057315 ACAGCAAAACATATGGTCAGTGC 60.057 43.478 13.47 13.47 33.16 4.40
3788 3821 4.771590 ACAGCAAAACATATGGTCAGTG 57.228 40.909 7.80 1.34 0.00 3.66
4049 4082 1.448540 CGCTCATGGTGGACTGTCC 60.449 63.158 19.96 19.96 36.96 4.02
4447 4480 7.389803 TGCATACAATGTTAGTGCACTTATT 57.610 32.000 27.06 19.12 40.51 1.40
4638 4671 6.479884 AGCAGTGATTGAGAAACCTAAAGAT 58.520 36.000 0.00 0.00 0.00 2.40
4685 4718 5.153513 CACCAAATACATCAACCTTCAACG 58.846 41.667 0.00 0.00 0.00 4.10
4925 4958 1.358787 ACTGCAGATTCCATCCCCAAA 59.641 47.619 23.35 0.00 0.00 3.28
4961 4994 1.194781 GGGGCCAGACTCTCACAGAA 61.195 60.000 4.39 0.00 0.00 3.02
5058 5091 8.349983 GTTTGAAAAGGACTTAGTAAGATGCAA 58.650 33.333 16.89 7.63 0.00 4.08
5222 5255 3.578716 CTCAGGAGTTTAGTTGAGGGACA 59.421 47.826 0.00 0.00 34.76 4.02
5223 5256 3.833070 TCTCAGGAGTTTAGTTGAGGGAC 59.167 47.826 0.00 0.00 38.05 4.46
5515 5548 1.346395 TGGCAACGACATGAGTAACCT 59.654 47.619 0.00 0.00 42.51 3.50
5528 5561 1.798813 GTTCCTAGTGAGTTGGCAACG 59.201 52.381 23.47 9.00 42.51 4.10
5841 5876 6.383415 GTCCAGTTTTTACTTGTGTTGTTCA 58.617 36.000 0.00 0.00 0.00 3.18
5908 5944 9.585099 TGCATAAATCATTTTTCATTACCTGTC 57.415 29.630 0.00 0.00 0.00 3.51
6367 6412 4.005650 TGATCACCTCTCTTGCATTGTTC 58.994 43.478 0.00 0.00 0.00 3.18
6474 6519 3.769300 GGGAGTATGTCAAAAAGCCCATT 59.231 43.478 0.00 0.00 34.47 3.16
6534 6579 5.627499 TGTGACTCCACTTCATAATTTGC 57.373 39.130 0.00 0.00 43.55 3.68
6537 6582 5.948162 AGCATTGTGACTCCACTTCATAATT 59.052 36.000 0.00 0.00 43.55 1.40
6545 6590 3.327757 TCCTAAAGCATTGTGACTCCACT 59.672 43.478 0.00 0.00 43.55 4.00
6546 6591 3.674997 TCCTAAAGCATTGTGACTCCAC 58.325 45.455 0.00 0.00 43.46 4.02
6547 6592 4.326826 CTTCCTAAAGCATTGTGACTCCA 58.673 43.478 0.00 0.00 0.00 3.86
6548 6593 3.691609 CCTTCCTAAAGCATTGTGACTCC 59.308 47.826 0.00 0.00 0.00 3.85
6549 6594 3.127721 GCCTTCCTAAAGCATTGTGACTC 59.872 47.826 0.00 0.00 0.00 3.36
6561 6612 2.290008 TGATGACTTGCGCCTTCCTAAA 60.290 45.455 4.18 0.00 0.00 1.85
6601 6652 4.194640 GCACTTAGCTCATTGAAGATGGA 58.805 43.478 0.00 0.00 41.15 3.41
6658 6709 7.749539 AATTTTGTTTCTTTCTTACACACGG 57.250 32.000 0.00 0.00 0.00 4.94
6702 6754 3.853072 AGGTACTCCCTCCGTCCT 58.147 61.111 0.00 0.00 40.71 3.85
6712 6764 2.893153 AAGTAGGCCTTGGGAGGTACTC 60.893 54.545 12.58 0.00 45.44 2.59
6713 6765 0.717196 AGTAGGCCTTGGGAGGTACT 59.283 55.000 12.58 1.73 45.44 2.73
6714 6766 1.581223 AAGTAGGCCTTGGGAGGTAC 58.419 55.000 12.58 0.00 45.44 3.34
6715 6767 1.913419 CAAAGTAGGCCTTGGGAGGTA 59.087 52.381 12.58 0.00 45.44 3.08
6716 6768 0.698818 CAAAGTAGGCCTTGGGAGGT 59.301 55.000 12.58 0.00 45.44 3.85
6717 6769 0.034089 CCAAAGTAGGCCTTGGGAGG 60.034 60.000 12.58 4.48 46.12 4.30
6718 6770 0.698818 ACCAAAGTAGGCCTTGGGAG 59.301 55.000 22.50 6.68 46.12 4.30
6719 6771 1.074889 GAACCAAAGTAGGCCTTGGGA 59.925 52.381 22.50 0.00 46.12 4.37
6721 6773 1.165270 CGAACCAAAGTAGGCCTTGG 58.835 55.000 18.11 18.11 32.32 3.61
6722 6774 1.892209 ACGAACCAAAGTAGGCCTTG 58.108 50.000 12.58 1.91 32.32 3.61
6723 6775 3.329929 CTACGAACCAAAGTAGGCCTT 57.670 47.619 12.58 0.00 37.32 4.35
6728 6780 7.611213 ATGAAATTCCTACGAACCAAAGTAG 57.389 36.000 0.00 0.00 39.84 2.57
6729 6781 7.767198 CCTATGAAATTCCTACGAACCAAAGTA 59.233 37.037 0.00 0.00 0.00 2.24
6730 6782 6.598064 CCTATGAAATTCCTACGAACCAAAGT 59.402 38.462 0.00 0.00 0.00 2.66
6731 6783 6.821665 TCCTATGAAATTCCTACGAACCAAAG 59.178 38.462 0.00 0.00 0.00 2.77
6732 6784 6.713276 TCCTATGAAATTCCTACGAACCAAA 58.287 36.000 0.00 0.00 0.00 3.28
6733 6785 6.302535 TCCTATGAAATTCCTACGAACCAA 57.697 37.500 0.00 0.00 0.00 3.67
6734 6786 5.943349 TCCTATGAAATTCCTACGAACCA 57.057 39.130 0.00 0.00 0.00 3.67
6735 6787 8.365647 TCTTATCCTATGAAATTCCTACGAACC 58.634 37.037 0.00 0.00 0.00 3.62
6736 6788 9.930693 ATCTTATCCTATGAAATTCCTACGAAC 57.069 33.333 0.00 0.00 0.00 3.95


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.