Multiple sequence alignment - TraesCS4D01G150400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G150400 chr4D 100.000 2372 0 0 1 2372 167022285 167024656 0.000000e+00 4381
1 TraesCS4D01G150400 chr4D 94.022 920 51 2 1453 2368 150237160 150238079 0.000000e+00 1391
2 TraesCS4D01G150400 chr4D 93.066 923 60 2 1454 2372 190394093 190395015 0.000000e+00 1347
3 TraesCS4D01G150400 chr4D 92.541 925 63 4 1453 2372 152721905 152722828 0.000000e+00 1321
4 TraesCS4D01G150400 chr4D 92.890 872 62 0 1 872 152720953 152721824 0.000000e+00 1267
5 TraesCS4D01G150400 chr4D 92.546 872 65 0 1 872 150236204 150237075 0.000000e+00 1251
6 TraesCS4D01G150400 chr3D 93.370 920 57 3 1453 2368 341050417 341049498 0.000000e+00 1358
7 TraesCS4D01G150400 chr3D 93.043 920 60 3 1453 2368 374778251 374777332 0.000000e+00 1341
8 TraesCS4D01G150400 chr3D 92.717 920 63 3 1453 2368 175713932 175714851 0.000000e+00 1325
9 TraesCS4D01G150400 chr3D 93.005 872 61 0 1 872 324820187 324819316 0.000000e+00 1273
10 TraesCS4D01G150400 chr3D 92.661 872 64 0 1 872 396127813 396128684 0.000000e+00 1256
11 TraesCS4D01G150400 chr3D 98.687 457 6 0 998 1454 589262332 589261876 0.000000e+00 811
12 TraesCS4D01G150400 chr3D 100.000 65 0 0 934 998 21904155 21904219 1.150000e-23 121
13 TraesCS4D01G150400 chr3D 98.551 69 0 1 934 1001 276616502 276616570 1.150000e-23 121
14 TraesCS4D01G150400 chr2D 93.471 919 53 4 1453 2368 388040175 388039261 0.000000e+00 1358
15 TraesCS4D01G150400 chr2D 93.043 920 60 3 1453 2368 371444194 371443275 0.000000e+00 1341
16 TraesCS4D01G150400 chr2D 93.693 872 55 0 1 872 421214625 421213754 0.000000e+00 1306
17 TraesCS4D01G150400 chr2D 93.005 872 60 1 1 872 371445145 371444275 0.000000e+00 1271
18 TraesCS4D01G150400 chr2D 98.906 457 5 0 998 1454 272811052 272810596 0.000000e+00 817
19 TraesCS4D01G150400 chr6D 94.273 873 49 1 1 872 215066037 215065165 0.000000e+00 1334
20 TraesCS4D01G150400 chr6D 98.906 457 5 0 998 1454 389244628 389244172 0.000000e+00 817
21 TraesCS4D01G150400 chr6D 98.462 65 1 0 873 937 168264373 168264437 5.360000e-22 115
22 TraesCS4D01G150400 chr6D 98.462 65 1 0 873 937 389251381 389251445 5.360000e-22 115
23 TraesCS4D01G150400 chr1D 92.609 920 61 4 1453 2368 310425147 310426063 0.000000e+00 1315
24 TraesCS4D01G150400 chr1D 92.890 872 62 0 1 872 310424195 310425066 0.000000e+00 1267
25 TraesCS4D01G150400 chr1D 92.767 871 63 0 1 871 114533993 114533123 0.000000e+00 1260
26 TraesCS4D01G150400 chr1D 100.000 65 0 0 934 998 19957563 19957627 1.150000e-23 121
27 TraesCS4D01G150400 chr1D 100.000 65 0 0 934 998 206072309 206072245 1.150000e-23 121
28 TraesCS4D01G150400 chr1D 100.000 65 0 0 934 998 254497527 254497591 1.150000e-23 121
29 TraesCS4D01G150400 chr7D 99.125 457 4 0 998 1454 77247445 77247901 0.000000e+00 822
30 TraesCS4D01G150400 chr7D 100.000 65 0 0 934 998 336507551 336507487 1.150000e-23 121
31 TraesCS4D01G150400 chr7D 100.000 65 0 0 934 998 336508025 336507961 1.150000e-23 121
32 TraesCS4D01G150400 chr7B 98.906 457 5 0 998 1454 662727598 662728054 0.000000e+00 817
33 TraesCS4D01G150400 chr5D 98.906 457 5 0 998 1454 503246466 503246922 0.000000e+00 817
34 TraesCS4D01G150400 chr5D 98.906 457 5 0 998 1454 503263582 503263126 0.000000e+00 817
35 TraesCS4D01G150400 chr5D 100.000 65 0 0 934 998 240137236 240137300 1.150000e-23 121
36 TraesCS4D01G150400 chr3A 98.906 457 5 0 998 1454 66003939 66003483 0.000000e+00 817
37 TraesCS4D01G150400 chr2A 98.687 457 6 0 998 1454 726905261 726904805 0.000000e+00 811
38 TraesCS4D01G150400 chr1A 100.000 65 0 0 934 998 112776503 112776439 1.150000e-23 121
39 TraesCS4D01G150400 chrUn 98.462 65 1 0 873 937 216511903 216511839 5.360000e-22 115
40 TraesCS4D01G150400 chrUn 98.462 65 1 0 873 937 217914010 217913946 5.360000e-22 115
41 TraesCS4D01G150400 chrUn 98.462 65 1 0 873 937 286271480 286271544 5.360000e-22 115
42 TraesCS4D01G150400 chrUn 98.462 65 1 0 873 937 352978375 352978439 5.360000e-22 115
43 TraesCS4D01G150400 chrUn 98.462 65 1 0 873 937 354077635 354077699 5.360000e-22 115
44 TraesCS4D01G150400 chrUn 98.462 65 1 0 873 937 406474927 406474991 5.360000e-22 115
45 TraesCS4D01G150400 chrUn 98.462 65 1 0 873 937 452334857 452334793 5.360000e-22 115


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G150400 chr4D 167022285 167024656 2371 False 4381 4381 100.0000 1 2372 1 chr4D.!!$F1 2371
1 TraesCS4D01G150400 chr4D 190394093 190395015 922 False 1347 1347 93.0660 1454 2372 1 chr4D.!!$F2 918
2 TraesCS4D01G150400 chr4D 150236204 150238079 1875 False 1321 1391 93.2840 1 2368 2 chr4D.!!$F3 2367
3 TraesCS4D01G150400 chr4D 152720953 152722828 1875 False 1294 1321 92.7155 1 2372 2 chr4D.!!$F4 2371
4 TraesCS4D01G150400 chr3D 341049498 341050417 919 True 1358 1358 93.3700 1453 2368 1 chr3D.!!$R2 915
5 TraesCS4D01G150400 chr3D 374777332 374778251 919 True 1341 1341 93.0430 1453 2368 1 chr3D.!!$R3 915
6 TraesCS4D01G150400 chr3D 175713932 175714851 919 False 1325 1325 92.7170 1453 2368 1 chr3D.!!$F2 915
7 TraesCS4D01G150400 chr3D 324819316 324820187 871 True 1273 1273 93.0050 1 872 1 chr3D.!!$R1 871
8 TraesCS4D01G150400 chr3D 396127813 396128684 871 False 1256 1256 92.6610 1 872 1 chr3D.!!$F4 871
9 TraesCS4D01G150400 chr2D 388039261 388040175 914 True 1358 1358 93.4710 1453 2368 1 chr2D.!!$R2 915
10 TraesCS4D01G150400 chr2D 371443275 371445145 1870 True 1306 1341 93.0240 1 2368 2 chr2D.!!$R4 2367
11 TraesCS4D01G150400 chr2D 421213754 421214625 871 True 1306 1306 93.6930 1 872 1 chr2D.!!$R3 871
12 TraesCS4D01G150400 chr6D 215065165 215066037 872 True 1334 1334 94.2730 1 872 1 chr6D.!!$R1 871
13 TraesCS4D01G150400 chr1D 310424195 310426063 1868 False 1291 1315 92.7495 1 2368 2 chr1D.!!$F3 2367
14 TraesCS4D01G150400 chr1D 114533123 114533993 870 True 1260 1260 92.7670 1 871 1 chr1D.!!$R1 870


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
944 946 0.028505 CGAAAATGGGCAGCGATCTG 59.971 55.0 0.0 0.0 43.16 2.9 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1828 1843 0.041312 CACCACCGCTTTCAAGAACG 60.041 55.0 0.0 0.0 0.0 3.95 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
120 121 1.003580 TCCCACATGGTTGAGAGCTTC 59.996 52.381 0.00 0.00 34.77 3.86
122 123 2.237143 CCCACATGGTTGAGAGCTTCTA 59.763 50.000 0.00 0.00 0.00 2.10
323 324 1.740380 CGTCTCATCAAACGCCAGGAT 60.740 52.381 0.00 0.00 31.48 3.24
452 453 1.745320 AACACGGACTGGAGCTCGTT 61.745 55.000 7.83 0.42 33.31 3.85
554 555 0.901827 TCGGCTTGACCATTGCTCTA 59.098 50.000 0.00 0.00 39.03 2.43
566 567 3.866582 GCTCTAGGGGTGCGCCAT 61.867 66.667 19.98 8.65 36.17 4.40
582 583 1.463831 GCCATCGAAGCATAGCAGATG 59.536 52.381 5.96 12.07 37.15 2.90
656 657 1.381522 CCATTGTCGGTGATGATGCA 58.618 50.000 0.00 0.00 0.00 3.96
703 704 2.040412 AGACCCTTGATGAACTTGACCC 59.960 50.000 0.00 0.00 0.00 4.46
710 711 1.280421 GATGAACTTGACCCCAGAGCT 59.720 52.381 0.00 0.00 0.00 4.09
734 735 2.185867 GATGGTGCGGACGGCTTA 59.814 61.111 0.00 0.00 44.05 3.09
742 743 1.660560 GCGGACGGCTTACACCTCTA 61.661 60.000 0.00 0.00 39.11 2.43
794 795 2.022918 AGAGGTATCAGTAGCCCCTTGT 60.023 50.000 0.00 0.00 0.00 3.16
826 828 2.273449 GGCCCAGGATGTCCAGTG 59.727 66.667 1.30 0.00 38.89 3.66
872 874 1.068352 GGGATGGTATGGAGGCCCTT 61.068 60.000 0.00 0.00 32.78 3.95
873 875 0.402121 GGATGGTATGGAGGCCCTTC 59.598 60.000 0.00 0.00 0.00 3.46
875 877 0.399949 ATGGTATGGAGGCCCTTCGA 60.400 55.000 0.00 0.00 0.00 3.71
876 878 1.048724 TGGTATGGAGGCCCTTCGAG 61.049 60.000 0.00 0.00 0.00 4.04
877 879 0.759436 GGTATGGAGGCCCTTCGAGA 60.759 60.000 0.00 0.00 0.00 4.04
878 880 1.343069 GTATGGAGGCCCTTCGAGAT 58.657 55.000 0.00 0.00 0.00 2.75
879 881 1.001406 GTATGGAGGCCCTTCGAGATG 59.999 57.143 0.00 0.00 0.00 2.90
881 883 0.032515 TGGAGGCCCTTCGAGATGTA 60.033 55.000 0.00 0.00 0.00 2.29
882 884 0.389757 GGAGGCCCTTCGAGATGTAC 59.610 60.000 0.00 0.00 0.00 2.90
883 885 0.030908 GAGGCCCTTCGAGATGTACG 59.969 60.000 0.00 0.00 0.00 3.67
884 886 1.067582 GGCCCTTCGAGATGTACGG 59.932 63.158 0.00 0.00 0.00 4.02
885 887 1.389609 GGCCCTTCGAGATGTACGGA 61.390 60.000 0.00 0.00 0.00 4.69
886 888 0.674534 GCCCTTCGAGATGTACGGAT 59.325 55.000 0.00 0.00 0.00 4.18
887 889 1.336056 GCCCTTCGAGATGTACGGATC 60.336 57.143 0.00 0.00 0.00 3.36
888 890 1.269998 CCCTTCGAGATGTACGGATCC 59.730 57.143 0.00 0.00 0.00 3.36
889 891 1.954382 CCTTCGAGATGTACGGATCCA 59.046 52.381 13.41 0.00 0.00 3.41
890 892 2.558795 CCTTCGAGATGTACGGATCCAT 59.441 50.000 13.41 0.00 0.00 3.41
891 893 3.569548 CTTCGAGATGTACGGATCCATG 58.430 50.000 13.41 0.00 0.00 3.66
892 894 2.583143 TCGAGATGTACGGATCCATGT 58.417 47.619 13.41 4.96 0.00 3.21
893 895 2.293399 TCGAGATGTACGGATCCATGTG 59.707 50.000 13.41 0.00 0.00 3.21
894 896 2.034685 CGAGATGTACGGATCCATGTGT 59.965 50.000 13.41 3.78 0.00 3.72
895 897 3.643763 GAGATGTACGGATCCATGTGTC 58.356 50.000 13.41 4.02 0.00 3.67
896 898 3.300388 AGATGTACGGATCCATGTGTCT 58.700 45.455 13.41 6.36 0.00 3.41
897 899 4.470602 AGATGTACGGATCCATGTGTCTA 58.529 43.478 13.41 0.00 0.00 2.59
898 900 4.278669 AGATGTACGGATCCATGTGTCTAC 59.721 45.833 13.41 0.00 0.00 2.59
899 901 3.358118 TGTACGGATCCATGTGTCTACA 58.642 45.455 13.41 1.07 41.89 2.74
901 903 5.134661 TGTACGGATCCATGTGTCTACATA 58.865 41.667 13.41 0.00 45.53 2.29
902 904 4.585955 ACGGATCCATGTGTCTACATAC 57.414 45.455 13.41 0.00 45.53 2.39
903 905 3.958147 ACGGATCCATGTGTCTACATACA 59.042 43.478 13.41 0.00 45.53 2.29
904 906 4.588951 ACGGATCCATGTGTCTACATACAT 59.411 41.667 13.41 0.00 45.53 2.29
905 907 5.773176 ACGGATCCATGTGTCTACATACATA 59.227 40.000 13.41 0.00 45.53 2.29
906 908 6.071896 ACGGATCCATGTGTCTACATACATAG 60.072 42.308 13.41 0.00 45.53 2.23
907 909 6.151144 CGGATCCATGTGTCTACATACATAGA 59.849 42.308 13.41 0.00 45.53 1.98
908 910 7.148000 CGGATCCATGTGTCTACATACATAGAT 60.148 40.741 13.41 0.00 45.53 1.98
909 911 8.535335 GGATCCATGTGTCTACATACATAGATT 58.465 37.037 6.95 0.00 45.53 2.40
910 912 9.579768 GATCCATGTGTCTACATACATAGATTC 57.420 37.037 0.00 0.00 45.53 2.52
911 913 8.712228 TCCATGTGTCTACATACATAGATTCT 57.288 34.615 0.00 0.00 45.53 2.40
912 914 8.579863 TCCATGTGTCTACATACATAGATTCTG 58.420 37.037 0.00 0.00 45.53 3.02
913 915 8.363390 CCATGTGTCTACATACATAGATTCTGT 58.637 37.037 0.00 0.00 45.53 3.41
914 916 9.755804 CATGTGTCTACATACATAGATTCTGTT 57.244 33.333 0.00 0.00 45.53 3.16
915 917 9.973450 ATGTGTCTACATACATAGATTCTGTTC 57.027 33.333 0.00 0.00 45.45 3.18
916 918 8.966868 TGTGTCTACATACATAGATTCTGTTCA 58.033 33.333 0.00 0.00 33.78 3.18
917 919 9.973450 GTGTCTACATACATAGATTCTGTTCAT 57.027 33.333 0.00 0.00 33.78 2.57
918 920 9.971922 TGTCTACATACATAGATTCTGTTCATG 57.028 33.333 0.00 0.00 33.78 3.07
919 921 9.416794 GTCTACATACATAGATTCTGTTCATGG 57.583 37.037 0.00 0.00 33.78 3.66
920 922 9.367160 TCTACATACATAGATTCTGTTCATGGA 57.633 33.333 0.00 0.00 0.00 3.41
926 928 8.370493 ACATAGATTCTGTTCATGGATTAACG 57.630 34.615 0.00 0.00 0.00 3.18
927 929 8.204160 ACATAGATTCTGTTCATGGATTAACGA 58.796 33.333 0.00 0.00 0.00 3.85
928 930 9.045223 CATAGATTCTGTTCATGGATTAACGAA 57.955 33.333 0.00 0.00 0.00 3.85
929 931 7.921786 AGATTCTGTTCATGGATTAACGAAA 57.078 32.000 0.00 0.00 0.00 3.46
930 932 8.335532 AGATTCTGTTCATGGATTAACGAAAA 57.664 30.769 0.00 0.00 0.00 2.29
931 933 8.960591 AGATTCTGTTCATGGATTAACGAAAAT 58.039 29.630 0.00 0.00 0.00 1.82
932 934 8.915871 ATTCTGTTCATGGATTAACGAAAATG 57.084 30.769 0.00 0.00 0.00 2.32
933 935 6.851609 TCTGTTCATGGATTAACGAAAATGG 58.148 36.000 0.00 0.00 0.00 3.16
934 936 5.960113 TGTTCATGGATTAACGAAAATGGG 58.040 37.500 0.00 0.00 0.00 4.00
935 937 4.647424 TCATGGATTAACGAAAATGGGC 57.353 40.909 0.00 0.00 0.00 5.36
936 938 4.019858 TCATGGATTAACGAAAATGGGCA 58.980 39.130 0.00 0.00 0.00 5.36
937 939 4.097741 TCATGGATTAACGAAAATGGGCAG 59.902 41.667 0.00 0.00 0.00 4.85
938 940 2.165437 TGGATTAACGAAAATGGGCAGC 59.835 45.455 0.00 0.00 0.00 5.25
939 941 2.450160 GATTAACGAAAATGGGCAGCG 58.550 47.619 0.00 0.00 0.00 5.18
940 942 1.524848 TTAACGAAAATGGGCAGCGA 58.475 45.000 0.00 0.00 0.00 4.93
941 943 1.745232 TAACGAAAATGGGCAGCGAT 58.255 45.000 0.00 0.00 0.00 4.58
942 944 0.451783 AACGAAAATGGGCAGCGATC 59.548 50.000 0.00 0.00 0.00 3.69
943 945 0.392998 ACGAAAATGGGCAGCGATCT 60.393 50.000 0.00 0.00 0.00 2.75
944 946 0.028505 CGAAAATGGGCAGCGATCTG 59.971 55.000 0.00 0.00 43.16 2.90
945 947 0.383231 GAAAATGGGCAGCGATCTGG 59.617 55.000 0.00 0.00 40.65 3.86
951 953 2.719979 GCAGCGATCTGGCATTGG 59.280 61.111 0.00 0.00 40.65 3.16
952 954 2.842256 GCAGCGATCTGGCATTGGG 61.842 63.158 0.00 0.00 40.65 4.12
953 955 1.452651 CAGCGATCTGGCATTGGGT 60.453 57.895 0.00 0.00 36.68 4.51
954 956 0.179048 CAGCGATCTGGCATTGGGTA 60.179 55.000 0.00 0.00 36.68 3.69
955 957 0.767375 AGCGATCTGGCATTGGGTAT 59.233 50.000 0.00 0.00 34.64 2.73
956 958 1.977854 AGCGATCTGGCATTGGGTATA 59.022 47.619 0.00 0.00 34.64 1.47
957 959 2.573462 AGCGATCTGGCATTGGGTATAT 59.427 45.455 0.00 0.00 34.64 0.86
958 960 3.009473 AGCGATCTGGCATTGGGTATATT 59.991 43.478 0.00 0.00 34.64 1.28
959 961 3.127548 GCGATCTGGCATTGGGTATATTG 59.872 47.826 0.00 0.00 0.00 1.90
960 962 3.691118 CGATCTGGCATTGGGTATATTGG 59.309 47.826 0.00 0.00 0.00 3.16
961 963 3.524095 TCTGGCATTGGGTATATTGGG 57.476 47.619 0.00 0.00 0.00 4.12
962 964 3.059853 TCTGGCATTGGGTATATTGGGA 58.940 45.455 0.00 0.00 0.00 4.37
963 965 3.157087 CTGGCATTGGGTATATTGGGAC 58.843 50.000 0.00 0.00 0.00 4.46
964 966 2.158385 TGGCATTGGGTATATTGGGACC 60.158 50.000 0.00 0.00 34.75 4.46
965 967 2.110011 GGCATTGGGTATATTGGGACCT 59.890 50.000 0.00 0.00 35.91 3.85
966 968 3.332485 GGCATTGGGTATATTGGGACCTA 59.668 47.826 0.00 0.00 35.91 3.08
967 969 4.567747 GGCATTGGGTATATTGGGACCTAG 60.568 50.000 0.00 0.00 35.91 3.02
968 970 4.288626 GCATTGGGTATATTGGGACCTAGA 59.711 45.833 0.00 0.00 35.91 2.43
969 971 5.222048 GCATTGGGTATATTGGGACCTAGAA 60.222 44.000 0.00 0.00 35.91 2.10
970 972 6.693045 GCATTGGGTATATTGGGACCTAGAAA 60.693 42.308 0.00 0.00 35.91 2.52
971 973 7.470192 CATTGGGTATATTGGGACCTAGAAAT 58.530 38.462 0.00 0.00 35.91 2.17
972 974 8.611257 CATTGGGTATATTGGGACCTAGAAATA 58.389 37.037 0.00 0.00 35.91 1.40
973 975 8.766492 TTGGGTATATTGGGACCTAGAAATAT 57.234 34.615 0.00 0.37 35.91 1.28
974 976 8.766492 TGGGTATATTGGGACCTAGAAATATT 57.234 34.615 0.00 0.00 35.91 1.28
975 977 8.832735 TGGGTATATTGGGACCTAGAAATATTC 58.167 37.037 0.00 0.00 35.91 1.75
976 978 9.059023 GGGTATATTGGGACCTAGAAATATTCT 57.941 37.037 0.00 0.00 36.80 2.40
980 982 7.937700 ATTGGGACCTAGAAATATTCTCTGA 57.062 36.000 0.00 0.00 41.14 3.27
981 983 7.937700 TTGGGACCTAGAAATATTCTCTGAT 57.062 36.000 0.00 0.00 41.14 2.90
982 984 7.308450 TGGGACCTAGAAATATTCTCTGATG 57.692 40.000 0.00 3.04 41.14 3.07
983 985 7.075797 TGGGACCTAGAAATATTCTCTGATGA 58.924 38.462 0.00 0.00 41.14 2.92
984 986 7.234371 TGGGACCTAGAAATATTCTCTGATGAG 59.766 40.741 0.00 0.00 41.14 2.90
985 987 7.096551 GGACCTAGAAATATTCTCTGATGAGC 58.903 42.308 0.00 0.00 41.14 4.26
986 988 6.686630 ACCTAGAAATATTCTCTGATGAGCG 58.313 40.000 0.00 0.00 41.14 5.03
987 989 6.098679 CCTAGAAATATTCTCTGATGAGCGG 58.901 44.000 0.00 0.00 41.14 5.52
988 990 5.798125 AGAAATATTCTCTGATGAGCGGA 57.202 39.130 0.00 0.00 40.03 5.54
989 991 5.537188 AGAAATATTCTCTGATGAGCGGAC 58.463 41.667 0.00 0.00 40.03 4.79
990 992 3.567576 ATATTCTCTGATGAGCGGACG 57.432 47.619 0.00 0.00 40.03 4.79
991 993 0.387202 ATTCTCTGATGAGCGGACGG 59.613 55.000 0.00 0.00 40.03 4.79
992 994 1.667154 TTCTCTGATGAGCGGACGGG 61.667 60.000 0.00 0.00 40.03 5.28
993 995 2.044352 TCTGATGAGCGGACGGGA 60.044 61.111 0.00 0.00 0.00 5.14
994 996 1.667154 CTCTGATGAGCGGACGGGAA 61.667 60.000 0.00 0.00 33.12 3.97
995 997 1.218047 CTGATGAGCGGACGGGAAA 59.782 57.895 0.00 0.00 0.00 3.13
996 998 0.391130 CTGATGAGCGGACGGGAAAA 60.391 55.000 0.00 0.00 0.00 2.29
997 999 0.672401 TGATGAGCGGACGGGAAAAC 60.672 55.000 0.00 0.00 0.00 2.43
998 1000 1.693083 GATGAGCGGACGGGAAAACG 61.693 60.000 0.00 0.00 40.31 3.60
999 1001 3.116531 GAGCGGACGGGAAAACGG 61.117 66.667 0.00 0.00 38.39 4.44
1000 1002 3.578515 GAGCGGACGGGAAAACGGA 62.579 63.158 0.00 0.00 38.39 4.69
1001 1003 2.435410 GCGGACGGGAAAACGGAT 60.435 61.111 0.00 0.00 38.39 4.18
1002 1004 2.746803 GCGGACGGGAAAACGGATG 61.747 63.158 0.00 0.00 38.39 3.51
1003 1005 1.375013 CGGACGGGAAAACGGATGT 60.375 57.895 0.00 0.00 38.39 3.06
1004 1006 1.356527 CGGACGGGAAAACGGATGTC 61.357 60.000 0.00 0.00 38.39 3.06
1005 1007 0.320946 GGACGGGAAAACGGATGTCA 60.321 55.000 0.00 0.00 38.39 3.58
1006 1008 1.076332 GACGGGAAAACGGATGTCAG 58.924 55.000 0.00 0.00 38.39 3.51
1007 1009 0.953960 ACGGGAAAACGGATGTCAGC 60.954 55.000 0.00 0.00 38.39 4.26
1008 1010 1.794222 GGGAAAACGGATGTCAGCG 59.206 57.895 0.00 0.00 0.00 5.18
1009 1011 1.644786 GGGAAAACGGATGTCAGCGG 61.645 60.000 0.00 0.00 0.00 5.52
1010 1012 0.953960 GGAAAACGGATGTCAGCGGT 60.954 55.000 0.00 0.00 0.00 5.68
1011 1013 0.872388 GAAAACGGATGTCAGCGGTT 59.128 50.000 8.09 8.09 0.00 4.44
1012 1014 0.872388 AAAACGGATGTCAGCGGTTC 59.128 50.000 13.54 0.00 0.00 3.62
1013 1015 1.289109 AAACGGATGTCAGCGGTTCG 61.289 55.000 13.54 0.00 0.00 3.95
1014 1016 2.149803 AACGGATGTCAGCGGTTCGA 62.150 55.000 8.09 0.00 0.00 3.71
1015 1017 1.874019 CGGATGTCAGCGGTTCGAG 60.874 63.158 0.00 0.00 0.00 4.04
1016 1018 1.215647 GGATGTCAGCGGTTCGAGT 59.784 57.895 0.00 0.00 0.00 4.18
1017 1019 0.802607 GGATGTCAGCGGTTCGAGTC 60.803 60.000 0.00 0.00 0.00 3.36
1018 1020 0.802607 GATGTCAGCGGTTCGAGTCC 60.803 60.000 0.00 0.00 0.00 3.85
1025 1027 2.869354 CGGTTCGAGTCCGCTTATC 58.131 57.895 15.84 0.00 41.48 1.75
1026 1028 0.381089 CGGTTCGAGTCCGCTTATCT 59.619 55.000 15.84 0.00 41.48 1.98
1027 1029 1.597445 CGGTTCGAGTCCGCTTATCTC 60.597 57.143 15.84 0.00 41.48 2.75
1028 1030 1.269154 GGTTCGAGTCCGCTTATCTCC 60.269 57.143 0.00 0.00 35.37 3.71
1029 1031 1.404391 GTTCGAGTCCGCTTATCTCCA 59.596 52.381 0.00 0.00 35.37 3.86
1030 1032 1.309950 TCGAGTCCGCTTATCTCCAG 58.690 55.000 0.00 0.00 35.37 3.86
1031 1033 0.318275 CGAGTCCGCTTATCTCCAGC 60.318 60.000 0.00 0.00 0.00 4.85
1032 1034 0.032815 GAGTCCGCTTATCTCCAGCC 59.967 60.000 0.00 0.00 33.29 4.85
1033 1035 1.069935 GTCCGCTTATCTCCAGCCC 59.930 63.158 0.00 0.00 33.29 5.19
1034 1036 2.029666 CCGCTTATCTCCAGCCCG 59.970 66.667 0.00 0.00 33.29 6.13
1035 1037 2.797278 CCGCTTATCTCCAGCCCGT 61.797 63.158 0.00 0.00 33.29 5.28
1036 1038 1.592669 CGCTTATCTCCAGCCCGTG 60.593 63.158 0.00 0.00 33.29 4.94
1037 1039 1.823295 GCTTATCTCCAGCCCGTGA 59.177 57.895 0.00 0.00 0.00 4.35
1038 1040 0.178068 GCTTATCTCCAGCCCGTGAA 59.822 55.000 0.00 0.00 0.00 3.18
1039 1041 1.941325 CTTATCTCCAGCCCGTGAAC 58.059 55.000 0.00 0.00 0.00 3.18
1040 1042 1.482593 CTTATCTCCAGCCCGTGAACT 59.517 52.381 0.00 0.00 0.00 3.01
1041 1043 1.568504 TATCTCCAGCCCGTGAACTT 58.431 50.000 0.00 0.00 0.00 2.66
1042 1044 1.568504 ATCTCCAGCCCGTGAACTTA 58.431 50.000 0.00 0.00 0.00 2.24
1043 1045 0.895530 TCTCCAGCCCGTGAACTTAG 59.104 55.000 0.00 0.00 0.00 2.18
1044 1046 0.741221 CTCCAGCCCGTGAACTTAGC 60.741 60.000 0.00 0.00 0.00 3.09
1045 1047 2.100631 CCAGCCCGTGAACTTAGCG 61.101 63.158 0.00 0.00 0.00 4.26
1046 1048 2.100631 CAGCCCGTGAACTTAGCGG 61.101 63.158 0.00 0.00 44.55 5.52
1055 1057 5.104562 CGTGAACTTAGCGGATACTATGA 57.895 43.478 0.00 0.00 0.00 2.15
1056 1058 5.700846 CGTGAACTTAGCGGATACTATGAT 58.299 41.667 0.00 0.00 0.00 2.45
1057 1059 6.839033 CGTGAACTTAGCGGATACTATGATA 58.161 40.000 0.00 0.00 0.00 2.15
1058 1060 6.962116 CGTGAACTTAGCGGATACTATGATAG 59.038 42.308 0.00 0.00 0.00 2.08
1059 1061 6.748198 GTGAACTTAGCGGATACTATGATAGC 59.252 42.308 0.00 0.00 0.00 2.97
1060 1062 5.487153 ACTTAGCGGATACTATGATAGCG 57.513 43.478 0.00 0.00 0.00 4.26
1061 1063 5.183969 ACTTAGCGGATACTATGATAGCGA 58.816 41.667 0.00 0.00 0.00 4.93
1062 1064 5.823570 ACTTAGCGGATACTATGATAGCGAT 59.176 40.000 0.00 0.00 0.00 4.58
1063 1065 6.990939 ACTTAGCGGATACTATGATAGCGATA 59.009 38.462 0.00 0.00 0.00 2.92
1064 1066 5.933187 AGCGGATACTATGATAGCGATAG 57.067 43.478 0.00 0.00 0.00 2.08
1078 1080 2.105323 CGATAGCACCGAATTTTGCC 57.895 50.000 4.51 0.00 39.75 4.52
1079 1081 1.400142 CGATAGCACCGAATTTTGCCA 59.600 47.619 4.51 0.00 39.75 4.92
1080 1082 2.159448 CGATAGCACCGAATTTTGCCAA 60.159 45.455 4.51 0.00 39.75 4.52
1081 1083 3.489059 CGATAGCACCGAATTTTGCCAAT 60.489 43.478 4.51 0.45 39.75 3.16
1082 1084 2.837532 AGCACCGAATTTTGCCAATT 57.162 40.000 4.51 0.00 39.75 2.32
1083 1085 2.687370 AGCACCGAATTTTGCCAATTC 58.313 42.857 7.95 7.95 39.75 2.17
1096 1098 1.656652 CCAATTCGGCAGTTCGATCT 58.343 50.000 0.00 0.00 39.03 2.75
1097 1099 2.821546 CCAATTCGGCAGTTCGATCTA 58.178 47.619 0.00 0.00 39.03 1.98
1098 1100 3.393800 CCAATTCGGCAGTTCGATCTAT 58.606 45.455 0.00 0.00 39.03 1.98
1099 1101 3.185188 CCAATTCGGCAGTTCGATCTATG 59.815 47.826 0.00 0.00 39.03 2.23
1100 1102 4.051237 CAATTCGGCAGTTCGATCTATGA 58.949 43.478 0.00 0.00 39.03 2.15
1101 1103 4.527509 ATTCGGCAGTTCGATCTATGAT 57.472 40.909 0.00 0.00 39.03 2.45
1102 1104 4.322080 TTCGGCAGTTCGATCTATGATT 57.678 40.909 0.00 0.00 39.03 2.57
1103 1105 4.322080 TCGGCAGTTCGATCTATGATTT 57.678 40.909 0.00 0.00 33.92 2.17
1104 1106 4.299155 TCGGCAGTTCGATCTATGATTTC 58.701 43.478 0.00 0.00 33.92 2.17
1105 1107 4.051237 CGGCAGTTCGATCTATGATTTCA 58.949 43.478 0.00 0.00 0.00 2.69
1106 1108 4.084849 CGGCAGTTCGATCTATGATTTCAC 60.085 45.833 0.00 0.00 0.00 3.18
1107 1109 4.811024 GGCAGTTCGATCTATGATTTCACA 59.189 41.667 0.00 0.00 0.00 3.58
1108 1110 5.468072 GGCAGTTCGATCTATGATTTCACAT 59.532 40.000 0.00 0.00 0.00 3.21
1109 1111 6.017605 GGCAGTTCGATCTATGATTTCACATT 60.018 38.462 0.00 0.00 0.00 2.71
1110 1112 7.068341 GCAGTTCGATCTATGATTTCACATTC 58.932 38.462 0.00 0.00 0.00 2.67
1111 1113 7.254556 GCAGTTCGATCTATGATTTCACATTCA 60.255 37.037 0.00 0.00 0.00 2.57
1112 1114 8.771766 CAGTTCGATCTATGATTTCACATTCAT 58.228 33.333 0.00 0.00 36.57 2.57
1113 1115 8.771766 AGTTCGATCTATGATTTCACATTCATG 58.228 33.333 0.00 0.00 34.52 3.07
1114 1116 7.662604 TCGATCTATGATTTCACATTCATGG 57.337 36.000 0.00 0.00 34.52 3.66
1115 1117 7.444299 TCGATCTATGATTTCACATTCATGGA 58.556 34.615 0.00 2.18 41.93 3.41
1116 1118 7.386025 TCGATCTATGATTTCACATTCATGGAC 59.614 37.037 1.78 0.00 40.97 4.02
1117 1119 6.849588 TCTATGATTTCACATTCATGGACG 57.150 37.500 0.00 0.00 35.65 4.79
1118 1120 6.348498 TCTATGATTTCACATTCATGGACGT 58.652 36.000 0.00 0.00 35.65 4.34
1119 1121 5.902613 ATGATTTCACATTCATGGACGTT 57.097 34.783 0.00 0.00 31.51 3.99
1120 1122 5.045668 TGATTTCACATTCATGGACGTTG 57.954 39.130 0.00 0.00 0.00 4.10
1121 1123 4.759183 TGATTTCACATTCATGGACGTTGA 59.241 37.500 0.00 0.00 0.00 3.18
1122 1124 5.415389 TGATTTCACATTCATGGACGTTGAT 59.585 36.000 0.00 0.00 0.00 2.57
1123 1125 6.597280 TGATTTCACATTCATGGACGTTGATA 59.403 34.615 0.00 0.00 0.00 2.15
1124 1126 6.809630 TTTCACATTCATGGACGTTGATAA 57.190 33.333 0.00 0.00 0.00 1.75
1125 1127 6.421377 TTCACATTCATGGACGTTGATAAG 57.579 37.500 0.00 0.00 0.00 1.73
1126 1128 5.729510 TCACATTCATGGACGTTGATAAGA 58.270 37.500 0.00 0.00 0.00 2.10
1127 1129 6.348498 TCACATTCATGGACGTTGATAAGAT 58.652 36.000 0.00 0.00 0.00 2.40
1128 1130 6.479990 TCACATTCATGGACGTTGATAAGATC 59.520 38.462 0.00 0.00 0.00 2.75
1129 1131 5.760253 ACATTCATGGACGTTGATAAGATCC 59.240 40.000 0.00 0.00 0.00 3.36
1130 1132 5.614324 TTCATGGACGTTGATAAGATCCT 57.386 39.130 0.00 0.00 0.00 3.24
1131 1133 5.614324 TCATGGACGTTGATAAGATCCTT 57.386 39.130 0.00 0.00 0.00 3.36
1132 1134 5.601662 TCATGGACGTTGATAAGATCCTTC 58.398 41.667 0.00 0.00 0.00 3.46
1133 1135 4.402056 TGGACGTTGATAAGATCCTTCC 57.598 45.455 0.00 0.00 0.00 3.46
1134 1136 3.772572 TGGACGTTGATAAGATCCTTCCA 59.227 43.478 0.00 0.00 0.00 3.53
1135 1137 4.408921 TGGACGTTGATAAGATCCTTCCAT 59.591 41.667 0.00 0.00 0.00 3.41
1136 1138 5.104527 TGGACGTTGATAAGATCCTTCCATT 60.105 40.000 0.00 0.00 0.00 3.16
1137 1139 5.823045 GGACGTTGATAAGATCCTTCCATTT 59.177 40.000 0.00 0.00 0.00 2.32
1138 1140 6.990349 GGACGTTGATAAGATCCTTCCATTTA 59.010 38.462 0.00 0.00 0.00 1.40
1139 1141 7.171678 GGACGTTGATAAGATCCTTCCATTTAG 59.828 40.741 0.00 0.00 0.00 1.85
1140 1142 7.565680 ACGTTGATAAGATCCTTCCATTTAGT 58.434 34.615 0.00 0.00 0.00 2.24
1141 1143 8.701895 ACGTTGATAAGATCCTTCCATTTAGTA 58.298 33.333 0.00 0.00 0.00 1.82
1142 1144 9.197694 CGTTGATAAGATCCTTCCATTTAGTAG 57.802 37.037 0.00 0.00 0.00 2.57
1143 1145 8.994170 GTTGATAAGATCCTTCCATTTAGTAGC 58.006 37.037 0.00 0.00 0.00 3.58
1144 1146 8.262601 TGATAAGATCCTTCCATTTAGTAGCA 57.737 34.615 0.00 0.00 0.00 3.49
1145 1147 8.150945 TGATAAGATCCTTCCATTTAGTAGCAC 58.849 37.037 0.00 0.00 0.00 4.40
1146 1148 5.297569 AGATCCTTCCATTTAGTAGCACC 57.702 43.478 0.00 0.00 0.00 5.01
1147 1149 4.971924 AGATCCTTCCATTTAGTAGCACCT 59.028 41.667 0.00 0.00 0.00 4.00
1148 1150 5.430089 AGATCCTTCCATTTAGTAGCACCTT 59.570 40.000 0.00 0.00 0.00 3.50
1149 1151 6.615726 AGATCCTTCCATTTAGTAGCACCTTA 59.384 38.462 0.00 0.00 0.00 2.69
1150 1152 6.235231 TCCTTCCATTTAGTAGCACCTTAG 57.765 41.667 0.00 0.00 0.00 2.18
1151 1153 5.130477 TCCTTCCATTTAGTAGCACCTTAGG 59.870 44.000 0.00 0.00 0.00 2.69
1152 1154 5.130477 CCTTCCATTTAGTAGCACCTTAGGA 59.870 44.000 4.77 0.00 0.00 2.94
1153 1155 6.183361 CCTTCCATTTAGTAGCACCTTAGGAT 60.183 42.308 4.77 0.00 0.00 3.24
1154 1156 6.174720 TCCATTTAGTAGCACCTTAGGATG 57.825 41.667 4.77 0.58 0.00 3.51
1155 1157 5.071788 TCCATTTAGTAGCACCTTAGGATGG 59.928 44.000 4.77 4.36 33.38 3.51
1156 1158 4.417426 TTTAGTAGCACCTTAGGATGGC 57.583 45.455 4.77 5.73 0.00 4.40
1157 1159 1.879575 AGTAGCACCTTAGGATGGCA 58.120 50.000 4.77 0.00 0.00 4.92
1158 1160 2.412591 AGTAGCACCTTAGGATGGCAT 58.587 47.619 4.77 0.00 0.00 4.40
1159 1161 3.587498 AGTAGCACCTTAGGATGGCATA 58.413 45.455 4.77 0.00 0.00 3.14
1160 1162 3.580458 AGTAGCACCTTAGGATGGCATAG 59.420 47.826 4.77 0.00 0.00 2.23
1161 1163 1.072965 AGCACCTTAGGATGGCATAGC 59.927 52.381 4.77 0.00 0.00 2.97
1164 1166 2.107204 CACCTTAGGATGGCATAGCCTT 59.893 50.000 12.47 2.59 44.62 4.35
1165 1167 3.327757 CACCTTAGGATGGCATAGCCTTA 59.672 47.826 12.47 3.76 44.62 2.69
1166 1168 3.980698 ACCTTAGGATGGCATAGCCTTAA 59.019 43.478 12.47 1.81 44.62 1.85
1167 1169 4.202472 ACCTTAGGATGGCATAGCCTTAAC 60.202 45.833 12.47 0.50 44.62 2.01
1168 1170 2.550830 AGGATGGCATAGCCTTAACG 57.449 50.000 9.71 0.00 44.62 3.18
1169 1171 1.768870 AGGATGGCATAGCCTTAACGT 59.231 47.619 9.71 0.00 44.62 3.99
1170 1172 2.172717 AGGATGGCATAGCCTTAACGTT 59.827 45.455 5.88 5.88 44.62 3.99
1171 1173 3.389983 AGGATGGCATAGCCTTAACGTTA 59.610 43.478 3.29 3.29 44.62 3.18
1172 1174 4.141574 AGGATGGCATAGCCTTAACGTTAA 60.142 41.667 19.12 19.12 44.62 2.01
1173 1175 5.456186 AGGATGGCATAGCCTTAACGTTAAT 60.456 40.000 20.39 9.27 44.62 1.40
1174 1176 7.462844 AGGATGGCATAGCCTTAACGTTAATG 61.463 42.308 20.39 18.13 44.62 1.90
1175 1177 4.483476 GGCATAGCCTTAACGTTAATGG 57.517 45.455 20.39 21.43 46.69 3.16
1176 1178 3.304458 GGCATAGCCTTAACGTTAATGGC 60.304 47.826 32.21 32.21 46.69 4.40
1177 1179 3.606153 GCATAGCCTTAACGTTAATGGCG 60.606 47.826 32.31 25.53 39.62 5.69
1178 1180 2.389962 AGCCTTAACGTTAATGGCGA 57.610 45.000 32.31 12.85 39.62 5.54
1179 1181 2.277084 AGCCTTAACGTTAATGGCGAG 58.723 47.619 32.31 19.06 39.62 5.03
1180 1182 1.329599 GCCTTAACGTTAATGGCGAGG 59.670 52.381 29.07 22.76 31.93 4.63
1181 1183 2.624636 CCTTAACGTTAATGGCGAGGT 58.375 47.619 20.39 0.00 0.00 3.85
1182 1184 3.004862 CCTTAACGTTAATGGCGAGGTT 58.995 45.455 20.39 0.00 0.00 3.50
1183 1185 3.063045 CCTTAACGTTAATGGCGAGGTTC 59.937 47.826 20.39 0.00 0.00 3.62
1184 1186 2.172851 AACGTTAATGGCGAGGTTCA 57.827 45.000 0.00 0.00 0.00 3.18
1185 1187 2.172851 ACGTTAATGGCGAGGTTCAA 57.827 45.000 0.00 0.00 0.00 2.69
1186 1188 2.496111 ACGTTAATGGCGAGGTTCAAA 58.504 42.857 0.00 0.00 0.00 2.69
1187 1189 2.879646 ACGTTAATGGCGAGGTTCAAAA 59.120 40.909 0.00 0.00 0.00 2.44
1188 1190 3.058501 ACGTTAATGGCGAGGTTCAAAAG 60.059 43.478 0.00 0.00 0.00 2.27
1189 1191 3.187637 CGTTAATGGCGAGGTTCAAAAGA 59.812 43.478 0.00 0.00 0.00 2.52
1193 1195 1.142060 TGGCGAGGTTCAAAAGAGGAA 59.858 47.619 0.00 0.00 0.00 3.36
1194 1196 2.227194 GGCGAGGTTCAAAAGAGGAAA 58.773 47.619 0.00 0.00 0.00 3.13
1195 1197 2.226674 GGCGAGGTTCAAAAGAGGAAAG 59.773 50.000 0.00 0.00 0.00 2.62
1201 1203 3.384668 GTTCAAAAGAGGAAAGGCTTGC 58.615 45.455 0.00 0.00 0.00 4.01
1208 1210 1.678970 GGAAAGGCTTGCGGTGGAT 60.679 57.895 0.00 0.00 0.00 3.41
1211 1213 0.679960 AAAGGCTTGCGGTGGATACC 60.680 55.000 0.00 0.00 43.89 2.73
1212 1214 1.562672 AAGGCTTGCGGTGGATACCT 61.563 55.000 0.00 0.00 45.22 3.08
1214 1216 0.249911 GGCTTGCGGTGGATACCTAG 60.250 60.000 0.00 0.00 45.22 3.02
1216 1218 0.249911 CTTGCGGTGGATACCTAGGC 60.250 60.000 9.30 0.00 45.22 3.93
1217 1219 0.978667 TTGCGGTGGATACCTAGGCA 60.979 55.000 9.30 0.00 45.22 4.75
1219 1221 1.746517 CGGTGGATACCTAGGCACC 59.253 63.158 20.72 20.72 45.22 5.01
1221 1223 0.693092 GGTGGATACCTAGGCACCCA 60.693 60.000 20.23 15.98 43.97 4.51
1222 1224 0.759346 GTGGATACCTAGGCACCCAG 59.241 60.000 9.30 0.00 0.00 4.45
1225 1227 1.133136 GGATACCTAGGCACCCAGAGA 60.133 57.143 9.30 0.00 0.00 3.10
1226 1228 1.964933 GATACCTAGGCACCCAGAGAC 59.035 57.143 9.30 0.00 0.00 3.36
1227 1229 0.395311 TACCTAGGCACCCAGAGACG 60.395 60.000 9.30 0.00 0.00 4.18
1228 1230 1.379977 CCTAGGCACCCAGAGACGA 60.380 63.158 0.00 0.00 0.00 4.20
1229 1231 1.388065 CCTAGGCACCCAGAGACGAG 61.388 65.000 0.00 0.00 0.00 4.18
1230 1232 1.379977 TAGGCACCCAGAGACGAGG 60.380 63.158 0.00 0.00 0.00 4.63
1231 1233 1.859841 TAGGCACCCAGAGACGAGGA 61.860 60.000 0.00 0.00 0.00 3.71
1232 1234 2.283529 GGCACCCAGAGACGAGGAA 61.284 63.158 0.00 0.00 0.00 3.36
1233 1235 1.216710 GCACCCAGAGACGAGGAAG 59.783 63.158 0.00 0.00 0.00 3.46
1234 1236 1.893786 CACCCAGAGACGAGGAAGG 59.106 63.158 0.00 0.00 0.00 3.46
1235 1237 1.305381 ACCCAGAGACGAGGAAGGG 60.305 63.158 0.00 0.00 42.07 3.95
1236 1238 2.726351 CCCAGAGACGAGGAAGGGC 61.726 68.421 0.00 0.00 0.00 5.19
1237 1239 2.492090 CAGAGACGAGGAAGGGCG 59.508 66.667 0.00 0.00 0.00 6.13
1238 1240 2.035940 AGAGACGAGGAAGGGCGT 59.964 61.111 0.00 0.00 44.33 5.68
1239 1241 1.030488 CAGAGACGAGGAAGGGCGTA 61.030 60.000 0.00 0.00 41.34 4.42
1240 1242 0.748729 AGAGACGAGGAAGGGCGTAG 60.749 60.000 0.00 0.00 41.34 3.51
1254 1256 3.474823 CGTAGCAAGCGACGAAATG 57.525 52.632 20.37 0.00 45.38 2.32
1255 1257 0.584054 CGTAGCAAGCGACGAAATGC 60.584 55.000 20.37 5.39 45.38 3.56
1256 1258 3.972227 AGCAAGCGACGAAATGCT 58.028 50.000 14.22 14.22 43.90 3.79
1268 1270 1.821216 GAAATGCTTCGGGGAGTTGA 58.179 50.000 0.00 0.00 0.00 3.18
1269 1271 2.159382 GAAATGCTTCGGGGAGTTGAA 58.841 47.619 0.00 0.00 0.00 2.69
1270 1272 2.286365 AATGCTTCGGGGAGTTGAAA 57.714 45.000 0.00 0.00 0.00 2.69
1271 1273 2.286365 ATGCTTCGGGGAGTTGAAAA 57.714 45.000 0.00 0.00 0.00 2.29
1272 1274 2.286365 TGCTTCGGGGAGTTGAAAAT 57.714 45.000 0.00 0.00 0.00 1.82
1273 1275 3.426787 TGCTTCGGGGAGTTGAAAATA 57.573 42.857 0.00 0.00 0.00 1.40
1274 1276 3.757270 TGCTTCGGGGAGTTGAAAATAA 58.243 40.909 0.00 0.00 0.00 1.40
1275 1277 3.756434 TGCTTCGGGGAGTTGAAAATAAG 59.244 43.478 0.00 0.00 0.00 1.73
1276 1278 3.427638 GCTTCGGGGAGTTGAAAATAAGC 60.428 47.826 0.00 0.00 0.00 3.09
1277 1279 3.426787 TCGGGGAGTTGAAAATAAGCA 57.573 42.857 0.00 0.00 0.00 3.91
1278 1280 3.963129 TCGGGGAGTTGAAAATAAGCAT 58.037 40.909 0.00 0.00 0.00 3.79
1279 1281 5.105567 TCGGGGAGTTGAAAATAAGCATA 57.894 39.130 0.00 0.00 0.00 3.14
1280 1282 5.123227 TCGGGGAGTTGAAAATAAGCATAG 58.877 41.667 0.00 0.00 0.00 2.23
1281 1283 5.104693 TCGGGGAGTTGAAAATAAGCATAGA 60.105 40.000 0.00 0.00 0.00 1.98
1282 1284 5.765182 CGGGGAGTTGAAAATAAGCATAGAT 59.235 40.000 0.00 0.00 0.00 1.98
1283 1285 6.073003 CGGGGAGTTGAAAATAAGCATAGATC 60.073 42.308 0.00 0.00 0.00 2.75
1284 1286 6.207614 GGGGAGTTGAAAATAAGCATAGATCC 59.792 42.308 0.00 0.00 0.00 3.36
1285 1287 6.073003 GGGAGTTGAAAATAAGCATAGATCCG 60.073 42.308 0.00 0.00 0.00 4.18
1286 1288 6.073003 GGAGTTGAAAATAAGCATAGATCCGG 60.073 42.308 0.00 0.00 0.00 5.14
1287 1289 6.591935 AGTTGAAAATAAGCATAGATCCGGA 58.408 36.000 6.61 6.61 0.00 5.14
1288 1290 6.708054 AGTTGAAAATAAGCATAGATCCGGAG 59.292 38.462 11.34 0.00 0.00 4.63
1289 1291 6.419484 TGAAAATAAGCATAGATCCGGAGA 57.581 37.500 11.34 0.00 0.00 3.71
1290 1292 7.009179 TGAAAATAAGCATAGATCCGGAGAT 57.991 36.000 11.34 2.92 34.57 2.75
1291 1293 7.453393 TGAAAATAAGCATAGATCCGGAGATT 58.547 34.615 11.34 3.01 30.90 2.40
1292 1294 7.604164 TGAAAATAAGCATAGATCCGGAGATTC 59.396 37.037 11.34 2.20 30.90 2.52
1293 1295 3.971245 AAGCATAGATCCGGAGATTCC 57.029 47.619 11.34 0.00 30.90 3.01
1294 1296 2.183679 AGCATAGATCCGGAGATTCCC 58.816 52.381 11.34 0.00 31.13 3.97
1295 1297 1.902508 GCATAGATCCGGAGATTCCCA 59.097 52.381 11.34 0.00 31.13 4.37
1296 1298 2.303022 GCATAGATCCGGAGATTCCCAA 59.697 50.000 11.34 0.00 31.13 4.12
1297 1299 3.244561 GCATAGATCCGGAGATTCCCAAA 60.245 47.826 11.34 0.00 31.13 3.28
1298 1300 4.566488 GCATAGATCCGGAGATTCCCAAAT 60.566 45.833 11.34 0.00 31.13 2.32
1299 1301 5.338381 GCATAGATCCGGAGATTCCCAAATA 60.338 44.000 11.34 0.00 31.13 1.40
1300 1302 4.899352 AGATCCGGAGATTCCCAAATAG 57.101 45.455 11.34 0.00 31.13 1.73
1301 1303 3.584848 AGATCCGGAGATTCCCAAATAGG 59.415 47.826 11.34 0.00 31.13 2.57
1302 1304 2.771688 TCCGGAGATTCCCAAATAGGT 58.228 47.619 0.00 0.00 31.13 3.08
1303 1305 2.704065 TCCGGAGATTCCCAAATAGGTC 59.296 50.000 0.00 0.00 31.13 3.85
1304 1306 2.438021 CCGGAGATTCCCAAATAGGTCA 59.562 50.000 0.00 0.00 31.13 4.02
1305 1307 3.118038 CCGGAGATTCCCAAATAGGTCAA 60.118 47.826 0.00 0.00 31.13 3.18
1306 1308 3.877508 CGGAGATTCCCAAATAGGTCAAC 59.122 47.826 0.00 0.00 31.13 3.18
1307 1309 4.207955 GGAGATTCCCAAATAGGTCAACC 58.792 47.826 0.00 0.00 34.66 3.77
1308 1310 7.383824 CGGAGATTCCCAAATAGGTCAACCT 62.384 48.000 6.95 6.95 40.96 3.50
1309 1311 5.510430 GAGATTCCCAAATAGGTCAACCTT 58.490 41.667 7.07 0.00 46.09 3.50
1310 1312 5.903923 AGATTCCCAAATAGGTCAACCTTT 58.096 37.500 7.07 0.00 46.09 3.11
1311 1313 6.322931 AGATTCCCAAATAGGTCAACCTTTT 58.677 36.000 7.07 2.95 46.09 2.27
1312 1314 7.475299 AGATTCCCAAATAGGTCAACCTTTTA 58.525 34.615 7.07 0.00 46.09 1.52
1313 1315 7.953493 AGATTCCCAAATAGGTCAACCTTTTAA 59.047 33.333 7.07 0.00 46.09 1.52
1314 1316 7.916077 TTCCCAAATAGGTCAACCTTTTAAA 57.084 32.000 7.07 0.00 46.09 1.52
1315 1317 7.292713 TCCCAAATAGGTCAACCTTTTAAAC 57.707 36.000 7.07 0.00 46.09 2.01
1316 1318 7.070629 TCCCAAATAGGTCAACCTTTTAAACT 58.929 34.615 7.07 0.00 46.09 2.66
1317 1319 7.014808 TCCCAAATAGGTCAACCTTTTAAACTG 59.985 37.037 7.07 1.63 46.09 3.16
1318 1320 6.645003 CCAAATAGGTCAACCTTTTAAACTGC 59.355 38.462 7.07 0.00 46.09 4.40
1319 1321 5.977489 ATAGGTCAACCTTTTAAACTGCC 57.023 39.130 7.07 0.00 46.09 4.85
1320 1322 3.910989 AGGTCAACCTTTTAAACTGCCT 58.089 40.909 0.00 0.00 46.09 4.75
1321 1323 3.636764 AGGTCAACCTTTTAAACTGCCTG 59.363 43.478 0.00 0.00 46.09 4.85
1322 1324 3.381045 GTCAACCTTTTAAACTGCCTGC 58.619 45.455 0.00 0.00 0.00 4.85
1323 1325 3.068165 GTCAACCTTTTAAACTGCCTGCT 59.932 43.478 0.00 0.00 0.00 4.24
1324 1326 3.068024 TCAACCTTTTAAACTGCCTGCTG 59.932 43.478 0.00 0.00 0.00 4.41
1325 1327 2.944129 ACCTTTTAAACTGCCTGCTGA 58.056 42.857 2.88 0.00 0.00 4.26
1326 1328 3.295973 ACCTTTTAAACTGCCTGCTGAA 58.704 40.909 2.88 0.00 0.00 3.02
1327 1329 3.897505 ACCTTTTAAACTGCCTGCTGAAT 59.102 39.130 2.88 0.00 0.00 2.57
1328 1330 4.021981 ACCTTTTAAACTGCCTGCTGAATC 60.022 41.667 2.88 0.00 0.00 2.52
1329 1331 4.488879 CTTTTAAACTGCCTGCTGAATCC 58.511 43.478 2.88 0.00 0.00 3.01
1330 1332 2.877097 TAAACTGCCTGCTGAATCCA 57.123 45.000 2.88 0.00 0.00 3.41
1331 1333 2.226962 AAACTGCCTGCTGAATCCAT 57.773 45.000 2.88 0.00 0.00 3.41
1332 1334 1.471119 AACTGCCTGCTGAATCCATG 58.529 50.000 2.88 0.00 0.00 3.66
1333 1335 0.622136 ACTGCCTGCTGAATCCATGA 59.378 50.000 0.00 0.00 0.00 3.07
1334 1336 1.309950 CTGCCTGCTGAATCCATGAG 58.690 55.000 0.00 0.00 0.00 2.90
1335 1337 0.750546 TGCCTGCTGAATCCATGAGC 60.751 55.000 0.00 0.00 0.00 4.26
1336 1338 0.750546 GCCTGCTGAATCCATGAGCA 60.751 55.000 5.96 5.96 40.40 4.26
1338 1340 3.489391 TGCTGAATCCATGAGCAGG 57.511 52.632 2.10 0.00 37.81 4.85
1339 1341 0.750546 TGCTGAATCCATGAGCAGGC 60.751 55.000 2.10 0.00 37.81 4.85
1340 1342 0.750546 GCTGAATCCATGAGCAGGCA 60.751 55.000 0.00 0.00 32.70 4.75
1341 1343 1.758936 CTGAATCCATGAGCAGGCAA 58.241 50.000 0.00 0.00 0.00 4.52
1342 1344 1.676529 CTGAATCCATGAGCAGGCAAG 59.323 52.381 0.00 0.00 0.00 4.01
1343 1345 1.282738 TGAATCCATGAGCAGGCAAGA 59.717 47.619 0.00 0.00 0.00 3.02
1344 1346 1.948145 GAATCCATGAGCAGGCAAGAG 59.052 52.381 0.00 0.00 0.00 2.85
1345 1347 1.210538 ATCCATGAGCAGGCAAGAGA 58.789 50.000 0.00 0.00 0.00 3.10
1346 1348 0.251354 TCCATGAGCAGGCAAGAGAC 59.749 55.000 0.00 0.00 0.00 3.36
1347 1349 0.035725 CCATGAGCAGGCAAGAGACA 60.036 55.000 0.00 0.00 0.00 3.41
1348 1350 1.612462 CCATGAGCAGGCAAGAGACAA 60.612 52.381 0.00 0.00 0.00 3.18
1349 1351 1.467734 CATGAGCAGGCAAGAGACAAC 59.532 52.381 0.00 0.00 0.00 3.32
1350 1352 0.250467 TGAGCAGGCAAGAGACAACC 60.250 55.000 0.00 0.00 0.00 3.77
1351 1353 0.036022 GAGCAGGCAAGAGACAACCT 59.964 55.000 0.00 0.00 0.00 3.50
1353 1355 2.938354 CAGGCAAGAGACAACCTGG 58.062 57.895 0.00 0.00 44.90 4.45
1354 1356 1.073897 AGGCAAGAGACAACCTGGC 59.926 57.895 0.00 0.00 0.00 4.85
1355 1357 2.328099 GGCAAGAGACAACCTGGCG 61.328 63.158 0.00 0.00 0.00 5.69
1356 1358 1.301716 GCAAGAGACAACCTGGCGA 60.302 57.895 0.00 0.00 0.00 5.54
1357 1359 0.884704 GCAAGAGACAACCTGGCGAA 60.885 55.000 0.00 0.00 0.00 4.70
1358 1360 1.813513 CAAGAGACAACCTGGCGAAT 58.186 50.000 0.00 0.00 0.00 3.34
1359 1361 2.154462 CAAGAGACAACCTGGCGAATT 58.846 47.619 0.00 0.00 0.00 2.17
1360 1362 3.334691 CAAGAGACAACCTGGCGAATTA 58.665 45.455 0.00 0.00 0.00 1.40
1361 1363 3.695830 AGAGACAACCTGGCGAATTAA 57.304 42.857 0.00 0.00 0.00 1.40
1362 1364 4.015872 AGAGACAACCTGGCGAATTAAA 57.984 40.909 0.00 0.00 0.00 1.52
1363 1365 4.394729 AGAGACAACCTGGCGAATTAAAA 58.605 39.130 0.00 0.00 0.00 1.52
1364 1366 4.215613 AGAGACAACCTGGCGAATTAAAAC 59.784 41.667 0.00 0.00 0.00 2.43
1365 1367 3.886505 AGACAACCTGGCGAATTAAAACA 59.113 39.130 0.00 0.00 0.00 2.83
1366 1368 4.522789 AGACAACCTGGCGAATTAAAACAT 59.477 37.500 0.00 0.00 0.00 2.71
1367 1369 4.805219 ACAACCTGGCGAATTAAAACATC 58.195 39.130 0.00 0.00 0.00 3.06
1368 1370 4.522789 ACAACCTGGCGAATTAAAACATCT 59.477 37.500 0.00 0.00 0.00 2.90
1369 1371 5.010617 ACAACCTGGCGAATTAAAACATCTT 59.989 36.000 0.00 0.00 0.00 2.40
1370 1372 6.207810 ACAACCTGGCGAATTAAAACATCTTA 59.792 34.615 0.00 0.00 0.00 2.10
1371 1373 6.436843 ACCTGGCGAATTAAAACATCTTAG 57.563 37.500 0.00 0.00 0.00 2.18
1372 1374 5.944007 ACCTGGCGAATTAAAACATCTTAGT 59.056 36.000 0.00 0.00 0.00 2.24
1373 1375 7.107542 ACCTGGCGAATTAAAACATCTTAGTA 58.892 34.615 0.00 0.00 0.00 1.82
1374 1376 7.280205 ACCTGGCGAATTAAAACATCTTAGTAG 59.720 37.037 0.00 0.00 0.00 2.57
1375 1377 7.011828 TGGCGAATTAAAACATCTTAGTAGC 57.988 36.000 0.00 0.00 0.00 3.58
1376 1378 6.037830 TGGCGAATTAAAACATCTTAGTAGCC 59.962 38.462 0.00 0.00 37.94 3.93
1377 1379 6.037830 GGCGAATTAAAACATCTTAGTAGCCA 59.962 38.462 0.00 0.00 37.45 4.75
1378 1380 7.126398 GCGAATTAAAACATCTTAGTAGCCAG 58.874 38.462 0.00 0.00 0.00 4.85
1379 1381 7.011109 GCGAATTAAAACATCTTAGTAGCCAGA 59.989 37.037 0.00 0.00 0.00 3.86
1380 1382 8.543774 CGAATTAAAACATCTTAGTAGCCAGAG 58.456 37.037 0.00 0.00 0.00 3.35
1381 1383 8.738645 AATTAAAACATCTTAGTAGCCAGAGG 57.261 34.615 0.00 0.00 0.00 3.69
1382 1384 7.490657 TTAAAACATCTTAGTAGCCAGAGGA 57.509 36.000 0.00 0.00 0.00 3.71
1383 1385 6.374417 AAAACATCTTAGTAGCCAGAGGAA 57.626 37.500 0.00 0.00 0.00 3.36
1384 1386 6.374417 AAACATCTTAGTAGCCAGAGGAAA 57.626 37.500 0.00 0.00 0.00 3.13
1385 1387 6.374417 AACATCTTAGTAGCCAGAGGAAAA 57.626 37.500 0.00 0.00 0.00 2.29
1386 1388 5.983540 ACATCTTAGTAGCCAGAGGAAAAG 58.016 41.667 0.00 0.00 0.00 2.27
1387 1389 5.721960 ACATCTTAGTAGCCAGAGGAAAAGA 59.278 40.000 0.00 0.00 0.00 2.52
1388 1390 6.213600 ACATCTTAGTAGCCAGAGGAAAAGAA 59.786 38.462 0.00 0.00 0.00 2.52
1389 1391 6.681729 TCTTAGTAGCCAGAGGAAAAGAAA 57.318 37.500 0.00 0.00 0.00 2.52
1390 1392 6.702329 TCTTAGTAGCCAGAGGAAAAGAAAG 58.298 40.000 0.00 0.00 0.00 2.62
1391 1393 3.680490 AGTAGCCAGAGGAAAAGAAAGC 58.320 45.455 0.00 0.00 0.00 3.51
1392 1394 2.664402 AGCCAGAGGAAAAGAAAGCA 57.336 45.000 0.00 0.00 0.00 3.91
1393 1395 2.949447 AGCCAGAGGAAAAGAAAGCAA 58.051 42.857 0.00 0.00 0.00 3.91
1394 1396 3.299503 AGCCAGAGGAAAAGAAAGCAAA 58.700 40.909 0.00 0.00 0.00 3.68
1395 1397 3.706086 AGCCAGAGGAAAAGAAAGCAAAA 59.294 39.130 0.00 0.00 0.00 2.44
1396 1398 4.053983 GCCAGAGGAAAAGAAAGCAAAAG 58.946 43.478 0.00 0.00 0.00 2.27
1397 1399 4.053983 CCAGAGGAAAAGAAAGCAAAAGC 58.946 43.478 0.00 0.00 0.00 3.51
1398 1400 3.732721 CAGAGGAAAAGAAAGCAAAAGCG 59.267 43.478 0.00 0.00 0.00 4.68
1399 1401 3.632145 AGAGGAAAAGAAAGCAAAAGCGA 59.368 39.130 0.00 0.00 0.00 4.93
1400 1402 4.279420 AGAGGAAAAGAAAGCAAAAGCGAT 59.721 37.500 0.00 0.00 0.00 4.58
1401 1403 4.948847 AGGAAAAGAAAGCAAAAGCGATT 58.051 34.783 0.00 0.00 0.00 3.34
1402 1404 4.984785 AGGAAAAGAAAGCAAAAGCGATTC 59.015 37.500 0.00 0.00 0.00 2.52
1403 1405 4.150627 GGAAAAGAAAGCAAAAGCGATTCC 59.849 41.667 0.00 0.00 0.00 3.01
1404 1406 3.303881 AAGAAAGCAAAAGCGATTCCC 57.696 42.857 0.00 0.00 0.00 3.97
1405 1407 1.200020 AGAAAGCAAAAGCGATTCCCG 59.800 47.619 0.00 0.00 42.21 5.14
1406 1408 0.958822 AAAGCAAAAGCGATTCCCGT 59.041 45.000 0.00 0.00 41.15 5.28
1409 1411 1.084289 GCAAAAGCGATTCCCGTAGT 58.916 50.000 0.00 0.00 41.15 2.73
1413 1415 0.030369 AAGCGATTCCCGTAGTAGCG 59.970 55.000 0.00 0.00 41.15 4.26
1429 1431 2.793946 CGGCGAGCAAAATGGGAG 59.206 61.111 0.00 0.00 0.00 4.30
1430 1432 2.491621 GGCGAGCAAAATGGGAGC 59.508 61.111 0.00 0.00 0.00 4.70
1431 1433 2.342650 GGCGAGCAAAATGGGAGCA 61.343 57.895 0.00 0.00 0.00 4.26
1432 1434 1.138247 GCGAGCAAAATGGGAGCAG 59.862 57.895 0.00 0.00 0.00 4.24
1433 1435 1.138247 CGAGCAAAATGGGAGCAGC 59.862 57.895 0.00 0.00 0.00 5.25
1434 1436 1.514553 GAGCAAAATGGGAGCAGCC 59.485 57.895 0.00 0.00 0.00 4.85
1435 1437 0.969409 GAGCAAAATGGGAGCAGCCT 60.969 55.000 0.00 0.00 36.66 4.58
1436 1438 0.332632 AGCAAAATGGGAGCAGCCTA 59.667 50.000 0.00 0.00 36.66 3.93
1437 1439 1.185315 GCAAAATGGGAGCAGCCTAA 58.815 50.000 0.00 0.00 36.66 2.69
1439 1441 2.675032 GCAAAATGGGAGCAGCCTAAAC 60.675 50.000 0.00 0.00 36.66 2.01
1441 1443 0.394352 AATGGGAGCAGCCTAAACCG 60.394 55.000 0.00 0.00 36.66 4.44
1442 1444 1.562672 ATGGGAGCAGCCTAAACCGT 61.563 55.000 0.00 0.00 36.66 4.83
1443 1445 1.745489 GGGAGCAGCCTAAACCGTG 60.745 63.158 0.00 0.00 36.66 4.94
1444 1446 1.295423 GGAGCAGCCTAAACCGTGA 59.705 57.895 0.00 0.00 0.00 4.35
1445 1447 0.321298 GGAGCAGCCTAAACCGTGAA 60.321 55.000 0.00 0.00 0.00 3.18
1446 1448 1.519408 GAGCAGCCTAAACCGTGAAA 58.481 50.000 0.00 0.00 0.00 2.69
1447 1449 1.877443 GAGCAGCCTAAACCGTGAAAA 59.123 47.619 0.00 0.00 0.00 2.29
1449 1451 2.228822 AGCAGCCTAAACCGTGAAAATG 59.771 45.455 0.00 0.00 0.00 2.32
1451 1453 2.094752 CAGCCTAAACCGTGAAAATGGG 60.095 50.000 0.00 0.00 0.00 4.00
1578 1587 1.496060 TCCCTGGAGATACAACGCAT 58.504 50.000 0.00 0.00 0.00 4.73
1645 1654 4.089239 TATGCCGTGGCTTGCCGA 62.089 61.111 12.84 0.00 42.51 5.54
1763 1778 1.609501 AAGAGTAGGTGCGCTCCCA 60.610 57.895 24.18 8.92 32.47 4.37
1764 1779 0.978146 AAGAGTAGGTGCGCTCCCAT 60.978 55.000 24.18 10.91 32.47 4.00
1768 1783 3.030168 TAGGTGCGCTCCCATGGTG 62.030 63.158 24.18 4.22 0.00 4.17
1813 1828 4.400961 GGCGGCTGCTGGAGTTCT 62.401 66.667 18.85 0.00 42.25 3.01
1876 1891 1.593787 CTTGAAGAGCCGCTCCTCA 59.406 57.895 16.28 16.28 34.26 3.86
1949 1964 0.178953 AGCTTCCTTGTTGGTGCCAT 60.179 50.000 0.00 0.00 37.19 4.40
2036 2051 0.247460 CTCCATGTGCTCGTCCTTCA 59.753 55.000 0.00 0.00 0.00 3.02
2210 2228 2.234661 AGCTGCACAACATAGTAGAGCA 59.765 45.455 1.02 0.00 30.97 4.26
2281 2299 3.070429 GCAAAGGCACCATCGAAATAG 57.930 47.619 0.00 0.00 40.72 1.73
2368 2386 3.554692 GCGTCCGTCCATTCTGCG 61.555 66.667 0.00 0.00 0.00 5.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
120 121 1.484240 CTCTCCAAGGAAGGGCTGTAG 59.516 57.143 0.00 0.00 0.00 2.74
122 123 1.846712 GCTCTCCAAGGAAGGGCTGT 61.847 60.000 3.97 0.00 0.00 4.40
133 134 3.706373 GAGGCGGGTGCTCTCCAA 61.706 66.667 0.00 0.00 42.25 3.53
267 268 1.760875 GGGGATGGACCTCGTGCTA 60.761 63.158 0.00 0.00 38.98 3.49
292 293 0.734253 GATGAGACGCAGCAAGACGT 60.734 55.000 0.00 0.00 46.91 4.34
323 324 3.932580 AAGCATCGCTTCGCACGGA 62.933 57.895 0.00 0.00 46.77 4.69
344 345 0.616111 AGCGGTTCTCCCTCATGAGT 60.616 55.000 21.11 0.00 33.93 3.41
348 349 0.539051 CAGAAGCGGTTCTCCCTCAT 59.461 55.000 26.13 1.88 41.40 2.90
554 555 4.473520 CTTCGATGGCGCACCCCT 62.474 66.667 10.83 0.00 37.46 4.79
566 567 1.575244 GCACATCTGCTATGCTTCGA 58.425 50.000 0.20 0.00 40.63 3.71
582 583 1.891919 TGCTGACCTTGGAACGCAC 60.892 57.895 0.00 0.00 0.00 5.34
656 657 2.841317 GTTTCGGGGTCCCCAACT 59.159 61.111 27.45 0.00 45.83 3.16
771 772 4.140663 ACAAGGGGCTACTGATACCTCTAT 60.141 45.833 0.00 0.00 31.22 1.98
861 863 0.692419 ACATCTCGAAGGGCCTCCAT 60.692 55.000 6.46 0.00 34.83 3.41
872 874 2.293399 CACATGGATCCGTACATCTCGA 59.707 50.000 6.04 0.00 0.00 4.04
873 875 2.034685 ACACATGGATCCGTACATCTCG 59.965 50.000 6.04 0.00 0.00 4.04
875 877 3.300388 AGACACATGGATCCGTACATCT 58.700 45.455 6.04 6.68 0.00 2.90
876 878 3.735237 AGACACATGGATCCGTACATC 57.265 47.619 6.04 4.39 0.00 3.06
877 879 3.958147 TGTAGACACATGGATCCGTACAT 59.042 43.478 6.04 0.00 0.00 2.29
878 880 3.358118 TGTAGACACATGGATCCGTACA 58.642 45.455 6.04 3.41 0.00 2.90
879 881 4.585955 ATGTAGACACATGGATCCGTAC 57.414 45.455 6.04 0.47 43.89 3.67
881 883 3.958147 TGTATGTAGACACATGGATCCGT 59.042 43.478 7.39 3.27 45.17 4.69
882 884 4.584327 TGTATGTAGACACATGGATCCG 57.416 45.455 7.39 0.00 45.17 4.18
883 885 7.468141 TCTATGTATGTAGACACATGGATCC 57.532 40.000 4.20 4.20 45.17 3.36
884 886 9.579768 GAATCTATGTATGTAGACACATGGATC 57.420 37.037 10.01 2.34 46.45 3.36
886 888 8.579863 CAGAATCTATGTATGTAGACACATGGA 58.420 37.037 0.00 0.00 45.17 3.41
887 889 8.363390 ACAGAATCTATGTATGTAGACACATGG 58.637 37.037 0.00 0.00 45.17 3.66
888 890 9.755804 AACAGAATCTATGTATGTAGACACATG 57.244 33.333 0.00 0.00 45.17 3.21
890 892 8.966868 TGAACAGAATCTATGTATGTAGACACA 58.033 33.333 0.00 0.00 39.52 3.72
891 893 9.973450 ATGAACAGAATCTATGTATGTAGACAC 57.027 33.333 0.00 0.00 33.78 3.67
892 894 9.971922 CATGAACAGAATCTATGTATGTAGACA 57.028 33.333 0.00 0.00 33.78 3.41
893 895 9.416794 CCATGAACAGAATCTATGTATGTAGAC 57.583 37.037 0.00 0.00 33.78 2.59
894 896 9.367160 TCCATGAACAGAATCTATGTATGTAGA 57.633 33.333 0.00 0.00 35.33 2.59
900 902 9.476202 CGTTAATCCATGAACAGAATCTATGTA 57.524 33.333 0.00 0.00 0.00 2.29
901 903 8.204160 TCGTTAATCCATGAACAGAATCTATGT 58.796 33.333 0.00 0.00 0.00 2.29
902 904 8.593492 TCGTTAATCCATGAACAGAATCTATG 57.407 34.615 0.00 0.00 0.00 2.23
903 905 9.613428 TTTCGTTAATCCATGAACAGAATCTAT 57.387 29.630 0.00 0.00 0.00 1.98
904 906 9.443323 TTTTCGTTAATCCATGAACAGAATCTA 57.557 29.630 0.00 0.00 0.00 1.98
905 907 7.921786 TTTCGTTAATCCATGAACAGAATCT 57.078 32.000 0.00 0.00 0.00 2.40
906 908 9.013490 CATTTTCGTTAATCCATGAACAGAATC 57.987 33.333 0.00 0.00 0.00 2.52
907 909 7.975616 CCATTTTCGTTAATCCATGAACAGAAT 59.024 33.333 0.00 0.00 0.00 2.40
908 910 7.312154 CCATTTTCGTTAATCCATGAACAGAA 58.688 34.615 0.00 0.00 0.00 3.02
909 911 6.127758 CCCATTTTCGTTAATCCATGAACAGA 60.128 38.462 0.00 0.00 0.00 3.41
910 912 6.035843 CCCATTTTCGTTAATCCATGAACAG 58.964 40.000 0.00 0.00 0.00 3.16
911 913 5.623368 GCCCATTTTCGTTAATCCATGAACA 60.623 40.000 0.00 0.00 0.00 3.18
912 914 4.803613 GCCCATTTTCGTTAATCCATGAAC 59.196 41.667 0.00 0.00 0.00 3.18
913 915 4.464244 TGCCCATTTTCGTTAATCCATGAA 59.536 37.500 0.00 0.00 0.00 2.57
914 916 4.019858 TGCCCATTTTCGTTAATCCATGA 58.980 39.130 0.00 0.00 0.00 3.07
915 917 4.362279 CTGCCCATTTTCGTTAATCCATG 58.638 43.478 0.00 0.00 0.00 3.66
916 918 3.181476 GCTGCCCATTTTCGTTAATCCAT 60.181 43.478 0.00 0.00 0.00 3.41
917 919 2.165437 GCTGCCCATTTTCGTTAATCCA 59.835 45.455 0.00 0.00 0.00 3.41
918 920 2.794631 CGCTGCCCATTTTCGTTAATCC 60.795 50.000 0.00 0.00 0.00 3.01
919 921 2.096819 TCGCTGCCCATTTTCGTTAATC 59.903 45.455 0.00 0.00 0.00 1.75
920 922 2.088423 TCGCTGCCCATTTTCGTTAAT 58.912 42.857 0.00 0.00 0.00 1.40
921 923 1.524848 TCGCTGCCCATTTTCGTTAA 58.475 45.000 0.00 0.00 0.00 2.01
922 924 1.668751 GATCGCTGCCCATTTTCGTTA 59.331 47.619 0.00 0.00 0.00 3.18
923 925 0.451783 GATCGCTGCCCATTTTCGTT 59.548 50.000 0.00 0.00 0.00 3.85
924 926 0.392998 AGATCGCTGCCCATTTTCGT 60.393 50.000 0.00 0.00 0.00 3.85
925 927 0.028505 CAGATCGCTGCCCATTTTCG 59.971 55.000 0.00 0.00 34.95 3.46
926 928 0.383231 CCAGATCGCTGCCCATTTTC 59.617 55.000 0.00 0.00 40.91 2.29
927 929 1.669999 GCCAGATCGCTGCCCATTTT 61.670 55.000 0.00 0.00 40.91 1.82
928 930 2.123428 GCCAGATCGCTGCCCATTT 61.123 57.895 0.00 0.00 40.91 2.32
929 931 2.517875 GCCAGATCGCTGCCCATT 60.518 61.111 0.00 0.00 40.91 3.16
930 932 2.635787 AATGCCAGATCGCTGCCCAT 62.636 55.000 0.00 0.00 40.91 4.00
931 933 3.348554 AATGCCAGATCGCTGCCCA 62.349 57.895 0.00 0.00 40.91 5.36
932 934 2.517875 AATGCCAGATCGCTGCCC 60.518 61.111 0.00 0.00 40.91 5.36
933 935 2.719979 CAATGCCAGATCGCTGCC 59.280 61.111 0.00 0.00 40.91 4.85
934 936 2.719979 CCAATGCCAGATCGCTGC 59.280 61.111 0.00 0.00 40.91 5.25
935 937 0.179048 TACCCAATGCCAGATCGCTG 60.179 55.000 0.00 0.00 41.93 5.18
936 938 0.767375 ATACCCAATGCCAGATCGCT 59.233 50.000 0.00 0.00 0.00 4.93
937 939 2.472695 TATACCCAATGCCAGATCGC 57.527 50.000 0.00 0.00 0.00 4.58
938 940 3.691118 CCAATATACCCAATGCCAGATCG 59.309 47.826 0.00 0.00 0.00 3.69
939 941 4.019174 CCCAATATACCCAATGCCAGATC 58.981 47.826 0.00 0.00 0.00 2.75
940 942 3.662148 TCCCAATATACCCAATGCCAGAT 59.338 43.478 0.00 0.00 0.00 2.90
941 943 3.059853 TCCCAATATACCCAATGCCAGA 58.940 45.455 0.00 0.00 0.00 3.86
942 944 3.157087 GTCCCAATATACCCAATGCCAG 58.843 50.000 0.00 0.00 0.00 4.85
943 945 2.158385 GGTCCCAATATACCCAATGCCA 60.158 50.000 0.00 0.00 0.00 4.92
944 946 2.110011 AGGTCCCAATATACCCAATGCC 59.890 50.000 0.00 0.00 36.34 4.40
945 947 3.525800 AGGTCCCAATATACCCAATGC 57.474 47.619 0.00 0.00 36.34 3.56
946 948 6.448369 TTCTAGGTCCCAATATACCCAATG 57.552 41.667 0.00 0.00 36.34 2.82
947 949 7.663501 ATTTCTAGGTCCCAATATACCCAAT 57.336 36.000 0.00 0.00 36.34 3.16
948 950 8.766492 ATATTTCTAGGTCCCAATATACCCAA 57.234 34.615 0.00 0.00 36.34 4.12
949 951 8.766492 AATATTTCTAGGTCCCAATATACCCA 57.234 34.615 0.00 0.00 36.34 4.51
950 952 9.059023 AGAATATTTCTAGGTCCCAATATACCC 57.941 37.037 0.00 0.00 38.49 3.69
954 956 9.621239 TCAGAGAATATTTCTAGGTCCCAATAT 57.379 33.333 0.00 0.00 40.87 1.28
955 957 9.621239 ATCAGAGAATATTTCTAGGTCCCAATA 57.379 33.333 0.00 0.00 40.87 1.90
956 958 7.937700 TCAGAGAATATTTCTAGGTCCCAAT 57.062 36.000 0.00 0.00 40.87 3.16
957 959 7.568738 TCATCAGAGAATATTTCTAGGTCCCAA 59.431 37.037 0.00 0.00 40.87 4.12
958 960 7.075797 TCATCAGAGAATATTTCTAGGTCCCA 58.924 38.462 0.00 0.00 40.87 4.37
959 961 7.546250 TCATCAGAGAATATTTCTAGGTCCC 57.454 40.000 0.00 0.00 40.87 4.46
960 962 7.096551 GCTCATCAGAGAATATTTCTAGGTCC 58.903 42.308 0.00 0.00 44.98 4.46
961 963 6.806249 CGCTCATCAGAGAATATTTCTAGGTC 59.194 42.308 0.00 0.00 44.98 3.85
962 964 6.295011 CCGCTCATCAGAGAATATTTCTAGGT 60.295 42.308 0.00 0.00 44.98 3.08
963 965 6.071672 TCCGCTCATCAGAGAATATTTCTAGG 60.072 42.308 0.00 0.00 44.98 3.02
964 966 6.806249 GTCCGCTCATCAGAGAATATTTCTAG 59.194 42.308 0.00 0.00 44.98 2.43
965 967 6.568653 CGTCCGCTCATCAGAGAATATTTCTA 60.569 42.308 0.00 0.00 44.98 2.10
966 968 5.537188 GTCCGCTCATCAGAGAATATTTCT 58.463 41.667 0.00 0.00 44.98 2.52
967 969 4.384247 CGTCCGCTCATCAGAGAATATTTC 59.616 45.833 0.00 0.00 44.98 2.17
968 970 4.302455 CGTCCGCTCATCAGAGAATATTT 58.698 43.478 0.00 0.00 44.98 1.40
969 971 3.305676 CCGTCCGCTCATCAGAGAATATT 60.306 47.826 0.00 0.00 44.98 1.28
970 972 2.230025 CCGTCCGCTCATCAGAGAATAT 59.770 50.000 0.00 0.00 44.98 1.28
971 973 1.609072 CCGTCCGCTCATCAGAGAATA 59.391 52.381 0.00 0.00 44.98 1.75
972 974 0.387202 CCGTCCGCTCATCAGAGAAT 59.613 55.000 0.00 0.00 44.98 2.40
973 975 1.667154 CCCGTCCGCTCATCAGAGAA 61.667 60.000 0.00 0.00 44.98 2.87
974 976 2.121538 CCCGTCCGCTCATCAGAGA 61.122 63.158 0.00 0.00 44.98 3.10
975 977 1.667154 TTCCCGTCCGCTCATCAGAG 61.667 60.000 0.00 0.00 44.96 3.35
976 978 1.254975 TTTCCCGTCCGCTCATCAGA 61.255 55.000 0.00 0.00 0.00 3.27
977 979 0.391130 TTTTCCCGTCCGCTCATCAG 60.391 55.000 0.00 0.00 0.00 2.90
978 980 0.672401 GTTTTCCCGTCCGCTCATCA 60.672 55.000 0.00 0.00 0.00 3.07
979 981 1.693083 CGTTTTCCCGTCCGCTCATC 61.693 60.000 0.00 0.00 0.00 2.92
980 982 1.740296 CGTTTTCCCGTCCGCTCAT 60.740 57.895 0.00 0.00 0.00 2.90
981 983 2.356553 CGTTTTCCCGTCCGCTCA 60.357 61.111 0.00 0.00 0.00 4.26
982 984 2.847435 ATCCGTTTTCCCGTCCGCTC 62.847 60.000 0.00 0.00 0.00 5.03
983 985 2.951101 ATCCGTTTTCCCGTCCGCT 61.951 57.895 0.00 0.00 0.00 5.52
984 986 2.435410 ATCCGTTTTCCCGTCCGC 60.435 61.111 0.00 0.00 0.00 5.54
985 987 1.356527 GACATCCGTTTTCCCGTCCG 61.357 60.000 0.00 0.00 0.00 4.79
986 988 0.320946 TGACATCCGTTTTCCCGTCC 60.321 55.000 0.00 0.00 0.00 4.79
987 989 1.076332 CTGACATCCGTTTTCCCGTC 58.924 55.000 0.00 0.00 0.00 4.79
988 990 0.953960 GCTGACATCCGTTTTCCCGT 60.954 55.000 0.00 0.00 0.00 5.28
989 991 1.794222 GCTGACATCCGTTTTCCCG 59.206 57.895 0.00 0.00 0.00 5.14
990 992 1.644786 CCGCTGACATCCGTTTTCCC 61.645 60.000 0.00 0.00 0.00 3.97
991 993 0.953960 ACCGCTGACATCCGTTTTCC 60.954 55.000 0.00 0.00 0.00 3.13
992 994 0.872388 AACCGCTGACATCCGTTTTC 59.128 50.000 0.00 0.00 0.00 2.29
993 995 0.872388 GAACCGCTGACATCCGTTTT 59.128 50.000 0.00 0.00 0.00 2.43
994 996 1.289109 CGAACCGCTGACATCCGTTT 61.289 55.000 0.00 0.00 0.00 3.60
995 997 1.736645 CGAACCGCTGACATCCGTT 60.737 57.895 0.00 0.00 0.00 4.44
996 998 2.126071 CGAACCGCTGACATCCGT 60.126 61.111 0.00 0.00 0.00 4.69
997 999 1.874019 CTCGAACCGCTGACATCCG 60.874 63.158 0.00 0.00 0.00 4.18
998 1000 0.802607 GACTCGAACCGCTGACATCC 60.803 60.000 0.00 0.00 0.00 3.51
999 1001 0.802607 GGACTCGAACCGCTGACATC 60.803 60.000 0.00 0.00 0.00 3.06
1000 1002 1.215647 GGACTCGAACCGCTGACAT 59.784 57.895 0.00 0.00 0.00 3.06
1001 1003 2.649034 GGACTCGAACCGCTGACA 59.351 61.111 0.00 0.00 0.00 3.58
1002 1004 2.504244 CGGACTCGAACCGCTGAC 60.504 66.667 15.72 0.00 43.74 3.51
1008 1010 1.269154 GGAGATAAGCGGACTCGAACC 60.269 57.143 0.00 0.00 39.00 3.62
1009 1011 1.404391 TGGAGATAAGCGGACTCGAAC 59.596 52.381 0.00 0.00 39.00 3.95
1010 1012 1.676529 CTGGAGATAAGCGGACTCGAA 59.323 52.381 0.00 0.00 39.00 3.71
1011 1013 1.309950 CTGGAGATAAGCGGACTCGA 58.690 55.000 0.00 0.00 39.00 4.04
1012 1014 0.318275 GCTGGAGATAAGCGGACTCG 60.318 60.000 0.00 0.00 39.81 4.18
1013 1015 0.032815 GGCTGGAGATAAGCGGACTC 59.967 60.000 0.00 0.00 41.78 3.36
1014 1016 1.403687 GGGCTGGAGATAAGCGGACT 61.404 60.000 0.00 0.00 41.78 3.85
1015 1017 1.069935 GGGCTGGAGATAAGCGGAC 59.930 63.158 0.00 0.00 41.78 4.79
1016 1018 2.498941 CGGGCTGGAGATAAGCGGA 61.499 63.158 0.00 0.00 41.78 5.54
1017 1019 2.029666 CGGGCTGGAGATAAGCGG 59.970 66.667 0.00 0.00 41.78 5.52
1018 1020 1.592669 CACGGGCTGGAGATAAGCG 60.593 63.158 0.00 0.00 41.78 4.68
1019 1021 0.178068 TTCACGGGCTGGAGATAAGC 59.822 55.000 0.00 0.00 40.06 3.09
1020 1022 1.482593 AGTTCACGGGCTGGAGATAAG 59.517 52.381 0.00 0.00 0.00 1.73
1021 1023 1.568504 AGTTCACGGGCTGGAGATAA 58.431 50.000 0.00 0.00 0.00 1.75
1022 1024 1.568504 AAGTTCACGGGCTGGAGATA 58.431 50.000 0.00 0.00 0.00 1.98
1023 1025 1.482593 CTAAGTTCACGGGCTGGAGAT 59.517 52.381 0.00 0.00 0.00 2.75
1024 1026 0.895530 CTAAGTTCACGGGCTGGAGA 59.104 55.000 0.00 0.00 0.00 3.71
1025 1027 0.741221 GCTAAGTTCACGGGCTGGAG 60.741 60.000 0.00 0.00 0.00 3.86
1026 1028 1.295423 GCTAAGTTCACGGGCTGGA 59.705 57.895 0.00 0.00 0.00 3.86
1027 1029 2.100631 CGCTAAGTTCACGGGCTGG 61.101 63.158 0.00 0.00 0.00 4.85
1028 1030 2.100631 CCGCTAAGTTCACGGGCTG 61.101 63.158 8.29 0.00 43.23 4.85
1029 1031 1.614241 ATCCGCTAAGTTCACGGGCT 61.614 55.000 14.52 2.77 46.87 5.19
1030 1032 0.103572 TATCCGCTAAGTTCACGGGC 59.896 55.000 14.52 0.00 46.87 6.13
1031 1033 1.407979 AGTATCCGCTAAGTTCACGGG 59.592 52.381 14.52 0.00 46.87 5.28
1033 1035 5.104562 TCATAGTATCCGCTAAGTTCACG 57.895 43.478 0.00 0.00 0.00 4.35
1034 1036 6.748198 GCTATCATAGTATCCGCTAAGTTCAC 59.252 42.308 0.00 0.00 0.00 3.18
1035 1037 6.403309 CGCTATCATAGTATCCGCTAAGTTCA 60.403 42.308 0.00 0.00 0.00 3.18
1036 1038 5.966503 CGCTATCATAGTATCCGCTAAGTTC 59.033 44.000 0.00 0.00 0.00 3.01
1037 1039 5.646793 TCGCTATCATAGTATCCGCTAAGTT 59.353 40.000 0.00 0.00 0.00 2.66
1038 1040 5.183969 TCGCTATCATAGTATCCGCTAAGT 58.816 41.667 0.00 0.00 0.00 2.24
1039 1041 5.736486 TCGCTATCATAGTATCCGCTAAG 57.264 43.478 0.00 0.00 0.00 2.18
1040 1042 6.073167 GCTATCGCTATCATAGTATCCGCTAA 60.073 42.308 0.00 0.00 0.00 3.09
1041 1043 5.408909 GCTATCGCTATCATAGTATCCGCTA 59.591 44.000 0.00 0.00 0.00 4.26
1042 1044 4.214545 GCTATCGCTATCATAGTATCCGCT 59.785 45.833 0.00 0.00 0.00 5.52
1043 1045 4.023963 TGCTATCGCTATCATAGTATCCGC 60.024 45.833 0.00 0.00 36.97 5.54
1044 1046 5.444983 GTGCTATCGCTATCATAGTATCCG 58.555 45.833 0.00 0.00 36.97 4.18
1045 1047 5.561145 CGGTGCTATCGCTATCATAGTATCC 60.561 48.000 0.00 0.00 36.97 2.59
1046 1048 5.236695 TCGGTGCTATCGCTATCATAGTATC 59.763 44.000 0.00 0.00 36.97 2.24
1047 1049 5.123936 TCGGTGCTATCGCTATCATAGTAT 58.876 41.667 0.00 0.00 36.97 2.12
1048 1050 4.510571 TCGGTGCTATCGCTATCATAGTA 58.489 43.478 0.00 0.00 36.97 1.82
1049 1051 3.344515 TCGGTGCTATCGCTATCATAGT 58.655 45.455 0.00 0.00 36.97 2.12
1050 1052 4.357018 TTCGGTGCTATCGCTATCATAG 57.643 45.455 0.00 0.00 36.97 2.23
1051 1053 4.983671 ATTCGGTGCTATCGCTATCATA 57.016 40.909 0.00 0.00 36.97 2.15
1052 1054 3.876274 ATTCGGTGCTATCGCTATCAT 57.124 42.857 0.00 0.00 36.97 2.45
1053 1055 3.660501 AATTCGGTGCTATCGCTATCA 57.339 42.857 0.00 0.00 36.97 2.15
1054 1056 4.702392 CAAAATTCGGTGCTATCGCTATC 58.298 43.478 0.00 0.00 36.97 2.08
1055 1057 3.058914 GCAAAATTCGGTGCTATCGCTAT 60.059 43.478 2.38 0.00 37.78 2.97
1056 1058 2.286833 GCAAAATTCGGTGCTATCGCTA 59.713 45.455 2.38 0.00 37.78 4.26
1057 1059 1.064060 GCAAAATTCGGTGCTATCGCT 59.936 47.619 2.38 0.00 37.78 4.93
1058 1060 1.466855 GCAAAATTCGGTGCTATCGC 58.533 50.000 2.38 0.00 37.78 4.58
1059 1061 1.400142 TGGCAAAATTCGGTGCTATCG 59.600 47.619 8.19 0.00 40.70 2.92
1060 1062 3.502191 TTGGCAAAATTCGGTGCTATC 57.498 42.857 0.00 0.00 40.70 2.08
1061 1063 4.432712 GAATTGGCAAAATTCGGTGCTAT 58.567 39.130 3.01 1.88 40.70 2.97
1062 1064 3.843999 GAATTGGCAAAATTCGGTGCTA 58.156 40.909 3.01 0.89 40.70 3.49
1063 1065 2.687370 GAATTGGCAAAATTCGGTGCT 58.313 42.857 3.01 0.00 40.70 4.40
1077 1079 1.656652 AGATCGAACTGCCGAATTGG 58.343 50.000 0.00 0.00 42.22 3.16
1078 1080 4.051237 TCATAGATCGAACTGCCGAATTG 58.949 43.478 5.31 0.00 42.22 2.32
1079 1081 4.322080 TCATAGATCGAACTGCCGAATT 57.678 40.909 5.31 0.00 42.22 2.17
1080 1082 4.527509 ATCATAGATCGAACTGCCGAAT 57.472 40.909 5.31 0.00 42.22 3.34
1081 1083 4.322080 AATCATAGATCGAACTGCCGAA 57.678 40.909 5.31 0.00 42.22 4.30
1082 1084 4.202111 TGAAATCATAGATCGAACTGCCGA 60.202 41.667 5.31 0.00 43.16 5.54
1083 1085 4.051237 TGAAATCATAGATCGAACTGCCG 58.949 43.478 5.31 0.00 0.00 5.69
1084 1086 4.811024 TGTGAAATCATAGATCGAACTGCC 59.189 41.667 5.31 0.00 0.00 4.85
1085 1087 5.973651 TGTGAAATCATAGATCGAACTGC 57.026 39.130 5.31 0.00 0.00 4.40
1086 1088 8.134905 TGAATGTGAAATCATAGATCGAACTG 57.865 34.615 5.31 0.00 0.00 3.16
1087 1089 8.771766 CATGAATGTGAAATCATAGATCGAACT 58.228 33.333 0.00 0.00 34.61 3.01
1088 1090 8.013947 CCATGAATGTGAAATCATAGATCGAAC 58.986 37.037 0.00 0.00 34.61 3.95
1089 1091 7.933033 TCCATGAATGTGAAATCATAGATCGAA 59.067 33.333 0.00 0.00 34.61 3.71
1090 1092 7.386025 GTCCATGAATGTGAAATCATAGATCGA 59.614 37.037 0.00 0.00 34.61 3.59
1091 1093 7.516481 GTCCATGAATGTGAAATCATAGATCG 58.484 38.462 0.00 0.00 34.61 3.69
1092 1094 7.172190 ACGTCCATGAATGTGAAATCATAGATC 59.828 37.037 0.00 0.00 34.61 2.75
1093 1095 6.994496 ACGTCCATGAATGTGAAATCATAGAT 59.006 34.615 0.00 0.00 34.61 1.98
1094 1096 6.348498 ACGTCCATGAATGTGAAATCATAGA 58.652 36.000 0.00 0.00 34.61 1.98
1095 1097 6.609237 ACGTCCATGAATGTGAAATCATAG 57.391 37.500 0.00 0.00 34.61 2.23
1096 1098 6.597280 TCAACGTCCATGAATGTGAAATCATA 59.403 34.615 0.00 0.00 34.61 2.15
1097 1099 5.415389 TCAACGTCCATGAATGTGAAATCAT 59.585 36.000 0.00 0.00 36.74 2.45
1098 1100 4.759183 TCAACGTCCATGAATGTGAAATCA 59.241 37.500 0.00 0.00 0.00 2.57
1099 1101 5.295431 TCAACGTCCATGAATGTGAAATC 57.705 39.130 0.00 0.00 0.00 2.17
1100 1102 5.902613 ATCAACGTCCATGAATGTGAAAT 57.097 34.783 0.00 0.00 0.00 2.17
1101 1103 6.652900 TCTTATCAACGTCCATGAATGTGAAA 59.347 34.615 0.00 0.00 0.00 2.69
1102 1104 6.169800 TCTTATCAACGTCCATGAATGTGAA 58.830 36.000 0.00 0.00 0.00 3.18
1103 1105 5.729510 TCTTATCAACGTCCATGAATGTGA 58.270 37.500 0.00 0.00 0.00 3.58
1104 1106 6.293081 GGATCTTATCAACGTCCATGAATGTG 60.293 42.308 0.00 0.00 0.00 3.21
1105 1107 5.760253 GGATCTTATCAACGTCCATGAATGT 59.240 40.000 0.00 0.00 0.00 2.71
1106 1108 5.994054 AGGATCTTATCAACGTCCATGAATG 59.006 40.000 0.00 0.00 0.00 2.67
1107 1109 6.179906 AGGATCTTATCAACGTCCATGAAT 57.820 37.500 0.00 0.00 0.00 2.57
1108 1110 5.614324 AGGATCTTATCAACGTCCATGAA 57.386 39.130 0.00 0.00 0.00 2.57
1109 1111 5.453339 GGAAGGATCTTATCAACGTCCATGA 60.453 44.000 0.00 0.00 0.00 3.07
1110 1112 4.752101 GGAAGGATCTTATCAACGTCCATG 59.248 45.833 0.00 0.00 0.00 3.66
1111 1113 4.408921 TGGAAGGATCTTATCAACGTCCAT 59.591 41.667 0.00 0.00 0.00 3.41
1112 1114 3.772572 TGGAAGGATCTTATCAACGTCCA 59.227 43.478 0.00 0.00 0.00 4.02
1113 1115 4.402056 TGGAAGGATCTTATCAACGTCC 57.598 45.455 0.00 0.00 0.00 4.79
1114 1116 6.927294 AAATGGAAGGATCTTATCAACGTC 57.073 37.500 0.00 0.00 0.00 4.34
1115 1117 7.565680 ACTAAATGGAAGGATCTTATCAACGT 58.434 34.615 0.00 0.00 0.00 3.99
1116 1118 9.197694 CTACTAAATGGAAGGATCTTATCAACG 57.802 37.037 0.00 0.00 0.00 4.10
1117 1119 8.994170 GCTACTAAATGGAAGGATCTTATCAAC 58.006 37.037 0.00 0.00 0.00 3.18
1118 1120 8.713971 TGCTACTAAATGGAAGGATCTTATCAA 58.286 33.333 0.00 0.00 0.00 2.57
1119 1121 8.150945 GTGCTACTAAATGGAAGGATCTTATCA 58.849 37.037 0.00 0.00 0.00 2.15
1120 1122 7.604545 GGTGCTACTAAATGGAAGGATCTTATC 59.395 40.741 0.00 0.00 0.00 1.75
1121 1123 7.293535 AGGTGCTACTAAATGGAAGGATCTTAT 59.706 37.037 0.00 0.00 0.00 1.73
1122 1124 6.615726 AGGTGCTACTAAATGGAAGGATCTTA 59.384 38.462 0.00 0.00 0.00 2.10
1123 1125 5.430089 AGGTGCTACTAAATGGAAGGATCTT 59.570 40.000 0.00 0.00 0.00 2.40
1124 1126 4.971924 AGGTGCTACTAAATGGAAGGATCT 59.028 41.667 0.00 0.00 0.00 2.75
1125 1127 5.297569 AGGTGCTACTAAATGGAAGGATC 57.702 43.478 0.00 0.00 0.00 3.36
1126 1128 5.717119 AAGGTGCTACTAAATGGAAGGAT 57.283 39.130 0.00 0.00 0.00 3.24
1127 1129 5.130477 CCTAAGGTGCTACTAAATGGAAGGA 59.870 44.000 0.00 0.00 0.00 3.36
1128 1130 5.130477 TCCTAAGGTGCTACTAAATGGAAGG 59.870 44.000 0.00 0.00 0.00 3.46
1129 1131 6.235231 TCCTAAGGTGCTACTAAATGGAAG 57.765 41.667 0.00 0.00 0.00 3.46
1130 1132 6.409234 CCATCCTAAGGTGCTACTAAATGGAA 60.409 42.308 0.00 0.00 33.38 3.53
1131 1133 5.071788 CCATCCTAAGGTGCTACTAAATGGA 59.928 44.000 0.00 0.00 33.38 3.41
1132 1134 5.308825 CCATCCTAAGGTGCTACTAAATGG 58.691 45.833 0.00 0.00 0.00 3.16
1133 1135 4.757149 GCCATCCTAAGGTGCTACTAAATG 59.243 45.833 0.00 0.00 0.00 2.32
1134 1136 4.412199 TGCCATCCTAAGGTGCTACTAAAT 59.588 41.667 0.00 0.00 0.00 1.40
1135 1137 3.778075 TGCCATCCTAAGGTGCTACTAAA 59.222 43.478 0.00 0.00 0.00 1.85
1136 1138 3.380393 TGCCATCCTAAGGTGCTACTAA 58.620 45.455 0.00 0.00 0.00 2.24
1137 1139 3.040655 TGCCATCCTAAGGTGCTACTA 57.959 47.619 0.00 0.00 0.00 1.82
1138 1140 1.879575 TGCCATCCTAAGGTGCTACT 58.120 50.000 0.00 0.00 0.00 2.57
1139 1141 2.938956 ATGCCATCCTAAGGTGCTAC 57.061 50.000 0.00 0.00 0.00 3.58
1140 1142 2.303022 GCTATGCCATCCTAAGGTGCTA 59.697 50.000 0.00 0.00 0.00 3.49
1141 1143 1.072965 GCTATGCCATCCTAAGGTGCT 59.927 52.381 0.00 0.00 0.00 4.40
1142 1144 1.528129 GCTATGCCATCCTAAGGTGC 58.472 55.000 0.00 0.00 0.00 5.01
1155 1157 3.606153 CGCCATTAACGTTAAGGCTATGC 60.606 47.826 33.67 26.21 43.07 3.14
1156 1158 3.805422 TCGCCATTAACGTTAAGGCTATG 59.195 43.478 33.67 25.93 43.07 2.23
1157 1159 4.056050 CTCGCCATTAACGTTAAGGCTAT 58.944 43.478 33.67 17.44 43.07 2.97
1158 1160 3.450578 CTCGCCATTAACGTTAAGGCTA 58.549 45.455 33.67 28.16 43.07 3.93
1159 1161 2.277084 CTCGCCATTAACGTTAAGGCT 58.723 47.619 33.67 17.98 43.07 4.58
1160 1162 1.329599 CCTCGCCATTAACGTTAAGGC 59.670 52.381 30.92 30.92 41.86 4.35
1161 1163 2.624636 ACCTCGCCATTAACGTTAAGG 58.375 47.619 23.78 23.05 0.00 2.69
1162 1164 3.680937 TGAACCTCGCCATTAACGTTAAG 59.319 43.478 23.78 13.56 0.00 1.85
1163 1165 3.661944 TGAACCTCGCCATTAACGTTAA 58.338 40.909 22.12 22.12 0.00 2.01
1164 1166 3.316071 TGAACCTCGCCATTAACGTTA 57.684 42.857 3.29 3.29 0.00 3.18
1165 1167 2.172851 TGAACCTCGCCATTAACGTT 57.827 45.000 5.88 5.88 0.00 3.99
1166 1168 2.172851 TTGAACCTCGCCATTAACGT 57.827 45.000 0.00 0.00 0.00 3.99
1167 1169 3.187637 TCTTTTGAACCTCGCCATTAACG 59.812 43.478 0.00 0.00 0.00 3.18
1168 1170 4.379499 CCTCTTTTGAACCTCGCCATTAAC 60.379 45.833 0.00 0.00 0.00 2.01
1169 1171 3.756434 CCTCTTTTGAACCTCGCCATTAA 59.244 43.478 0.00 0.00 0.00 1.40
1170 1172 3.008594 TCCTCTTTTGAACCTCGCCATTA 59.991 43.478 0.00 0.00 0.00 1.90
1171 1173 2.162681 CCTCTTTTGAACCTCGCCATT 58.837 47.619 0.00 0.00 0.00 3.16
1172 1174 1.351017 TCCTCTTTTGAACCTCGCCAT 59.649 47.619 0.00 0.00 0.00 4.40
1173 1175 0.762418 TCCTCTTTTGAACCTCGCCA 59.238 50.000 0.00 0.00 0.00 5.69
1174 1176 1.892209 TTCCTCTTTTGAACCTCGCC 58.108 50.000 0.00 0.00 0.00 5.54
1175 1177 2.226674 CCTTTCCTCTTTTGAACCTCGC 59.773 50.000 0.00 0.00 0.00 5.03
1176 1178 2.226674 GCCTTTCCTCTTTTGAACCTCG 59.773 50.000 0.00 0.00 0.00 4.63
1177 1179 3.491342 AGCCTTTCCTCTTTTGAACCTC 58.509 45.455 0.00 0.00 0.00 3.85
1178 1180 3.602205 AGCCTTTCCTCTTTTGAACCT 57.398 42.857 0.00 0.00 0.00 3.50
1179 1181 3.800261 GCAAGCCTTTCCTCTTTTGAACC 60.800 47.826 0.00 0.00 0.00 3.62
1180 1182 3.384668 GCAAGCCTTTCCTCTTTTGAAC 58.615 45.455 0.00 0.00 0.00 3.18
1181 1183 2.034558 CGCAAGCCTTTCCTCTTTTGAA 59.965 45.455 0.00 0.00 0.00 2.69
1182 1184 1.608590 CGCAAGCCTTTCCTCTTTTGA 59.391 47.619 0.00 0.00 0.00 2.69
1183 1185 1.336240 CCGCAAGCCTTTCCTCTTTTG 60.336 52.381 0.00 0.00 0.00 2.44
1184 1186 0.961753 CCGCAAGCCTTTCCTCTTTT 59.038 50.000 0.00 0.00 0.00 2.27
1185 1187 0.178990 ACCGCAAGCCTTTCCTCTTT 60.179 50.000 0.00 0.00 0.00 2.52
1186 1188 0.890996 CACCGCAAGCCTTTCCTCTT 60.891 55.000 0.00 0.00 0.00 2.85
1187 1189 1.302832 CACCGCAAGCCTTTCCTCT 60.303 57.895 0.00 0.00 0.00 3.69
1188 1190 2.335712 CCACCGCAAGCCTTTCCTC 61.336 63.158 0.00 0.00 0.00 3.71
1189 1191 2.142292 ATCCACCGCAAGCCTTTCCT 62.142 55.000 0.00 0.00 0.00 3.36
1193 1195 1.077716 GGTATCCACCGCAAGCCTT 60.078 57.895 0.00 0.00 34.36 4.35
1194 1196 2.590092 GGTATCCACCGCAAGCCT 59.410 61.111 0.00 0.00 34.36 4.58
1208 1210 0.395311 CGTCTCTGGGTGCCTAGGTA 60.395 60.000 11.31 2.03 0.00 3.08
1211 1213 1.388065 CCTCGTCTCTGGGTGCCTAG 61.388 65.000 0.00 0.00 0.00 3.02
1212 1214 1.379977 CCTCGTCTCTGGGTGCCTA 60.380 63.158 0.00 0.00 0.00 3.93
1214 1216 2.232298 CTTCCTCGTCTCTGGGTGCC 62.232 65.000 0.00 0.00 0.00 5.01
1216 1218 1.608717 CCCTTCCTCGTCTCTGGGTG 61.609 65.000 0.00 0.00 0.00 4.61
1217 1219 1.305381 CCCTTCCTCGTCTCTGGGT 60.305 63.158 0.00 0.00 0.00 4.51
1219 1221 2.896443 GCCCTTCCTCGTCTCTGG 59.104 66.667 0.00 0.00 0.00 3.86
1221 1223 0.748729 CTACGCCCTTCCTCGTCTCT 60.749 60.000 0.00 0.00 39.79 3.10
1222 1224 1.728672 CTACGCCCTTCCTCGTCTC 59.271 63.158 0.00 0.00 39.79 3.36
1225 1227 2.227089 CTTGCTACGCCCTTCCTCGT 62.227 60.000 0.00 0.00 42.09 4.18
1226 1228 1.519455 CTTGCTACGCCCTTCCTCG 60.519 63.158 0.00 0.00 0.00 4.63
1227 1229 1.815840 GCTTGCTACGCCCTTCCTC 60.816 63.158 0.00 0.00 0.00 3.71
1228 1230 2.269241 GCTTGCTACGCCCTTCCT 59.731 61.111 0.00 0.00 0.00 3.36
1229 1231 3.195698 CGCTTGCTACGCCCTTCC 61.196 66.667 0.00 0.00 0.00 3.46
1230 1232 2.125673 TCGCTTGCTACGCCCTTC 60.126 61.111 0.00 0.00 0.00 3.46
1231 1233 2.434359 GTCGCTTGCTACGCCCTT 60.434 61.111 0.00 0.00 0.00 3.95
1232 1234 4.796231 CGTCGCTTGCTACGCCCT 62.796 66.667 6.73 0.00 31.66 5.19
1233 1235 4.789075 TCGTCGCTTGCTACGCCC 62.789 66.667 13.53 0.00 38.94 6.13
1234 1236 1.693083 ATTTCGTCGCTTGCTACGCC 61.693 55.000 13.53 0.00 38.94 5.68
1235 1237 0.584054 CATTTCGTCGCTTGCTACGC 60.584 55.000 13.53 0.00 38.94 4.42
1236 1238 0.584054 GCATTTCGTCGCTTGCTACG 60.584 55.000 12.40 12.40 40.40 3.51
1237 1239 0.721718 AGCATTTCGTCGCTTGCTAC 59.278 50.000 12.66 0.00 43.28 3.58
1238 1240 1.438651 AAGCATTTCGTCGCTTGCTA 58.561 45.000 14.07 0.00 46.41 3.49
1239 1241 2.247790 AAGCATTTCGTCGCTTGCT 58.752 47.368 9.62 9.62 46.41 3.91
1240 1242 4.847255 AAGCATTTCGTCGCTTGC 57.153 50.000 0.00 5.95 46.41 4.01
1249 1251 1.821216 TCAACTCCCCGAAGCATTTC 58.179 50.000 0.00 0.00 0.00 2.17
1250 1252 2.286365 TTCAACTCCCCGAAGCATTT 57.714 45.000 0.00 0.00 0.00 2.32
1251 1253 2.286365 TTTCAACTCCCCGAAGCATT 57.714 45.000 0.00 0.00 0.00 3.56
1252 1254 2.286365 TTTTCAACTCCCCGAAGCAT 57.714 45.000 0.00 0.00 0.00 3.79
1253 1255 2.286365 ATTTTCAACTCCCCGAAGCA 57.714 45.000 0.00 0.00 0.00 3.91
1254 1256 3.427638 GCTTATTTTCAACTCCCCGAAGC 60.428 47.826 0.00 0.00 0.00 3.86
1255 1257 3.756434 TGCTTATTTTCAACTCCCCGAAG 59.244 43.478 0.00 0.00 0.00 3.79
1256 1258 3.757270 TGCTTATTTTCAACTCCCCGAA 58.243 40.909 0.00 0.00 0.00 4.30
1257 1259 3.426787 TGCTTATTTTCAACTCCCCGA 57.573 42.857 0.00 0.00 0.00 5.14
1258 1260 5.123227 TCTATGCTTATTTTCAACTCCCCG 58.877 41.667 0.00 0.00 0.00 5.73
1259 1261 6.207614 GGATCTATGCTTATTTTCAACTCCCC 59.792 42.308 0.00 0.00 0.00 4.81
1260 1262 6.073003 CGGATCTATGCTTATTTTCAACTCCC 60.073 42.308 0.00 0.00 0.00 4.30
1261 1263 6.073003 CCGGATCTATGCTTATTTTCAACTCC 60.073 42.308 0.00 0.00 0.00 3.85
1262 1264 6.706270 TCCGGATCTATGCTTATTTTCAACTC 59.294 38.462 0.00 0.00 0.00 3.01
1263 1265 6.591935 TCCGGATCTATGCTTATTTTCAACT 58.408 36.000 0.00 0.00 0.00 3.16
1264 1266 6.706270 TCTCCGGATCTATGCTTATTTTCAAC 59.294 38.462 3.57 0.00 0.00 3.18
1265 1267 6.826668 TCTCCGGATCTATGCTTATTTTCAA 58.173 36.000 3.57 0.00 0.00 2.69
1266 1268 6.419484 TCTCCGGATCTATGCTTATTTTCA 57.581 37.500 3.57 0.00 0.00 2.69
1267 1269 7.065204 GGAATCTCCGGATCTATGCTTATTTTC 59.935 40.741 3.57 0.00 0.00 2.29
1268 1270 6.881602 GGAATCTCCGGATCTATGCTTATTTT 59.118 38.462 3.57 0.00 0.00 1.82
1269 1271 6.410540 GGAATCTCCGGATCTATGCTTATTT 58.589 40.000 3.57 0.00 0.00 1.40
1270 1272 5.104735 GGGAATCTCCGGATCTATGCTTATT 60.105 44.000 3.57 0.00 37.43 1.40
1271 1273 4.407296 GGGAATCTCCGGATCTATGCTTAT 59.593 45.833 3.57 0.00 37.43 1.73
1272 1274 3.769844 GGGAATCTCCGGATCTATGCTTA 59.230 47.826 3.57 0.00 37.43 3.09
1273 1275 2.569404 GGGAATCTCCGGATCTATGCTT 59.431 50.000 3.57 0.00 37.43 3.91
1274 1276 2.183679 GGGAATCTCCGGATCTATGCT 58.816 52.381 3.57 0.00 37.43 3.79
1275 1277 1.902508 TGGGAATCTCCGGATCTATGC 59.097 52.381 3.57 0.00 37.43 3.14
1276 1278 4.623932 TTTGGGAATCTCCGGATCTATG 57.376 45.455 3.57 0.00 37.43 2.23
1277 1279 5.426833 CCTATTTGGGAATCTCCGGATCTAT 59.573 44.000 3.57 0.00 37.43 1.98
1278 1280 4.777896 CCTATTTGGGAATCTCCGGATCTA 59.222 45.833 3.57 0.00 37.43 1.98
1279 1281 3.584848 CCTATTTGGGAATCTCCGGATCT 59.415 47.826 3.57 0.00 37.43 2.75
1280 1282 3.328050 ACCTATTTGGGAATCTCCGGATC 59.672 47.826 3.57 0.00 37.43 3.36
1281 1283 3.327439 ACCTATTTGGGAATCTCCGGAT 58.673 45.455 3.57 0.00 37.43 4.18
1282 1284 2.704065 GACCTATTTGGGAATCTCCGGA 59.296 50.000 2.93 2.93 37.43 5.14
1283 1285 2.438021 TGACCTATTTGGGAATCTCCGG 59.562 50.000 0.00 0.00 37.43 5.14
1284 1286 3.838244 TGACCTATTTGGGAATCTCCG 57.162 47.619 0.00 0.00 37.43 4.63
1285 1287 4.079730 AGGTTGACCTATTTGGGAATCTCC 60.080 45.833 0.00 0.00 46.48 3.71
1286 1288 5.117406 AGGTTGACCTATTTGGGAATCTC 57.883 43.478 0.00 0.00 46.48 2.75
1300 1302 3.798889 GCAGGCAGTTTAAAAGGTTGACC 60.799 47.826 0.00 0.00 0.00 4.02
1301 1303 3.068165 AGCAGGCAGTTTAAAAGGTTGAC 59.932 43.478 0.00 0.00 0.00 3.18
1302 1304 3.068024 CAGCAGGCAGTTTAAAAGGTTGA 59.932 43.478 0.00 0.00 0.00 3.18
1303 1305 3.068024 TCAGCAGGCAGTTTAAAAGGTTG 59.932 43.478 0.00 0.00 0.00 3.77
1304 1306 3.295973 TCAGCAGGCAGTTTAAAAGGTT 58.704 40.909 0.00 0.00 0.00 3.50
1305 1307 2.944129 TCAGCAGGCAGTTTAAAAGGT 58.056 42.857 0.00 0.00 0.00 3.50
1306 1308 4.488879 GATTCAGCAGGCAGTTTAAAAGG 58.511 43.478 0.00 0.00 0.00 3.11
1307 1309 4.022068 TGGATTCAGCAGGCAGTTTAAAAG 60.022 41.667 0.00 0.00 0.00 2.27
1308 1310 3.894427 TGGATTCAGCAGGCAGTTTAAAA 59.106 39.130 0.00 0.00 0.00 1.52
1309 1311 3.495331 TGGATTCAGCAGGCAGTTTAAA 58.505 40.909 0.00 0.00 0.00 1.52
1310 1312 3.153369 TGGATTCAGCAGGCAGTTTAA 57.847 42.857 0.00 0.00 0.00 1.52
1311 1313 2.877097 TGGATTCAGCAGGCAGTTTA 57.123 45.000 0.00 0.00 0.00 2.01
1312 1314 1.822990 CATGGATTCAGCAGGCAGTTT 59.177 47.619 0.00 0.00 0.00 2.66
1313 1315 1.005097 TCATGGATTCAGCAGGCAGTT 59.995 47.619 0.00 0.00 0.00 3.16
1314 1316 0.622136 TCATGGATTCAGCAGGCAGT 59.378 50.000 0.00 0.00 0.00 4.40
1315 1317 1.309950 CTCATGGATTCAGCAGGCAG 58.690 55.000 0.00 0.00 0.00 4.85
1316 1318 0.750546 GCTCATGGATTCAGCAGGCA 60.751 55.000 0.00 0.00 33.06 4.75
1317 1319 0.750546 TGCTCATGGATTCAGCAGGC 60.751 55.000 2.10 0.00 38.25 4.85
1318 1320 3.489391 TGCTCATGGATTCAGCAGG 57.511 52.632 2.10 0.00 38.25 4.85
1320 1322 0.750546 GCCTGCTCATGGATTCAGCA 60.751 55.000 5.96 5.96 40.90 4.41
1321 1323 0.750546 TGCCTGCTCATGGATTCAGC 60.751 55.000 0.00 0.00 0.00 4.26
1322 1324 1.676529 CTTGCCTGCTCATGGATTCAG 59.323 52.381 0.00 0.00 0.00 3.02
1323 1325 1.282738 TCTTGCCTGCTCATGGATTCA 59.717 47.619 0.00 0.00 0.00 2.57
1324 1326 1.948145 CTCTTGCCTGCTCATGGATTC 59.052 52.381 0.00 0.00 0.00 2.52
1325 1327 1.562942 TCTCTTGCCTGCTCATGGATT 59.437 47.619 0.00 0.00 0.00 3.01
1326 1328 1.134159 GTCTCTTGCCTGCTCATGGAT 60.134 52.381 0.00 0.00 0.00 3.41
1327 1329 0.251354 GTCTCTTGCCTGCTCATGGA 59.749 55.000 0.00 0.00 0.00 3.41
1328 1330 0.035725 TGTCTCTTGCCTGCTCATGG 60.036 55.000 0.00 0.00 0.00 3.66
1329 1331 1.467734 GTTGTCTCTTGCCTGCTCATG 59.532 52.381 0.00 0.00 0.00 3.07
1330 1332 1.612726 GGTTGTCTCTTGCCTGCTCAT 60.613 52.381 0.00 0.00 0.00 2.90
1331 1333 0.250467 GGTTGTCTCTTGCCTGCTCA 60.250 55.000 0.00 0.00 0.00 4.26
1332 1334 0.036022 AGGTTGTCTCTTGCCTGCTC 59.964 55.000 0.00 0.00 0.00 4.26
1333 1335 0.250640 CAGGTTGTCTCTTGCCTGCT 60.251 55.000 0.00 0.00 41.46 4.24
1334 1336 1.239968 CCAGGTTGTCTCTTGCCTGC 61.240 60.000 4.07 0.00 45.16 4.85
1335 1337 1.239968 GCCAGGTTGTCTCTTGCCTG 61.240 60.000 0.00 0.00 45.86 4.85
1336 1338 1.073897 GCCAGGTTGTCTCTTGCCT 59.926 57.895 0.00 0.00 0.00 4.75
1337 1339 2.328099 CGCCAGGTTGTCTCTTGCC 61.328 63.158 0.00 0.00 0.00 4.52
1338 1340 0.884704 TTCGCCAGGTTGTCTCTTGC 60.885 55.000 0.00 0.00 0.00 4.01
1339 1341 1.813513 ATTCGCCAGGTTGTCTCTTG 58.186 50.000 0.00 0.00 0.00 3.02
1340 1342 2.568623 AATTCGCCAGGTTGTCTCTT 57.431 45.000 0.00 0.00 0.00 2.85
1341 1343 3.695830 TTAATTCGCCAGGTTGTCTCT 57.304 42.857 0.00 0.00 0.00 3.10
1342 1344 4.023536 TGTTTTAATTCGCCAGGTTGTCTC 60.024 41.667 0.00 0.00 0.00 3.36
1343 1345 3.886505 TGTTTTAATTCGCCAGGTTGTCT 59.113 39.130 0.00 0.00 0.00 3.41
1344 1346 4.231718 TGTTTTAATTCGCCAGGTTGTC 57.768 40.909 0.00 0.00 0.00 3.18
1345 1347 4.522789 AGATGTTTTAATTCGCCAGGTTGT 59.477 37.500 0.00 0.00 0.00 3.32
1346 1348 5.059404 AGATGTTTTAATTCGCCAGGTTG 57.941 39.130 0.00 0.00 0.00 3.77
1347 1349 5.722021 AAGATGTTTTAATTCGCCAGGTT 57.278 34.783 0.00 0.00 0.00 3.50
1348 1350 5.944007 ACTAAGATGTTTTAATTCGCCAGGT 59.056 36.000 0.00 0.00 0.00 4.00
1349 1351 6.436843 ACTAAGATGTTTTAATTCGCCAGG 57.563 37.500 0.00 0.00 0.00 4.45
1350 1352 7.126398 GCTACTAAGATGTTTTAATTCGCCAG 58.874 38.462 0.00 0.00 0.00 4.85
1351 1353 6.037830 GGCTACTAAGATGTTTTAATTCGCCA 59.962 38.462 0.00 0.00 0.00 5.69
1352 1354 6.037830 TGGCTACTAAGATGTTTTAATTCGCC 59.962 38.462 0.00 0.00 0.00 5.54
1353 1355 7.011109 TCTGGCTACTAAGATGTTTTAATTCGC 59.989 37.037 0.00 0.00 0.00 4.70
1354 1356 8.420374 TCTGGCTACTAAGATGTTTTAATTCG 57.580 34.615 0.00 0.00 0.00 3.34
1355 1357 8.831550 CCTCTGGCTACTAAGATGTTTTAATTC 58.168 37.037 0.00 0.00 0.00 2.17
1356 1358 8.548877 TCCTCTGGCTACTAAGATGTTTTAATT 58.451 33.333 0.00 0.00 0.00 1.40
1357 1359 8.090788 TCCTCTGGCTACTAAGATGTTTTAAT 57.909 34.615 0.00 0.00 0.00 1.40
1358 1360 7.490657 TCCTCTGGCTACTAAGATGTTTTAA 57.509 36.000 0.00 0.00 0.00 1.52
1359 1361 7.490657 TTCCTCTGGCTACTAAGATGTTTTA 57.509 36.000 0.00 0.00 0.00 1.52
1360 1362 6.374417 TTCCTCTGGCTACTAAGATGTTTT 57.626 37.500 0.00 0.00 0.00 2.43
1361 1363 6.374417 TTTCCTCTGGCTACTAAGATGTTT 57.626 37.500 0.00 0.00 0.00 2.83
1362 1364 6.213600 TCTTTTCCTCTGGCTACTAAGATGTT 59.786 38.462 0.00 0.00 0.00 2.71
1363 1365 5.721960 TCTTTTCCTCTGGCTACTAAGATGT 59.278 40.000 0.00 0.00 0.00 3.06
1364 1366 6.227298 TCTTTTCCTCTGGCTACTAAGATG 57.773 41.667 0.00 0.00 0.00 2.90
1365 1367 6.875972 TTCTTTTCCTCTGGCTACTAAGAT 57.124 37.500 0.00 0.00 0.00 2.40
1366 1368 6.681729 TTTCTTTTCCTCTGGCTACTAAGA 57.318 37.500 0.00 0.00 0.00 2.10
1367 1369 5.352846 GCTTTCTTTTCCTCTGGCTACTAAG 59.647 44.000 0.00 0.00 0.00 2.18
1368 1370 5.221843 TGCTTTCTTTTCCTCTGGCTACTAA 60.222 40.000 0.00 0.00 0.00 2.24
1369 1371 4.286032 TGCTTTCTTTTCCTCTGGCTACTA 59.714 41.667 0.00 0.00 0.00 1.82
1370 1372 3.073062 TGCTTTCTTTTCCTCTGGCTACT 59.927 43.478 0.00 0.00 0.00 2.57
1371 1373 3.412386 TGCTTTCTTTTCCTCTGGCTAC 58.588 45.455 0.00 0.00 0.00 3.58
1372 1374 3.788227 TGCTTTCTTTTCCTCTGGCTA 57.212 42.857 0.00 0.00 0.00 3.93
1373 1375 2.664402 TGCTTTCTTTTCCTCTGGCT 57.336 45.000 0.00 0.00 0.00 4.75
1374 1376 3.733443 TTTGCTTTCTTTTCCTCTGGC 57.267 42.857 0.00 0.00 0.00 4.85
1375 1377 4.053983 GCTTTTGCTTTCTTTTCCTCTGG 58.946 43.478 0.00 0.00 43.35 3.86
1376 1378 3.732721 CGCTTTTGCTTTCTTTTCCTCTG 59.267 43.478 0.00 0.00 44.80 3.35
1377 1379 3.632145 TCGCTTTTGCTTTCTTTTCCTCT 59.368 39.130 0.00 0.00 44.80 3.69
1378 1380 3.964909 TCGCTTTTGCTTTCTTTTCCTC 58.035 40.909 0.00 0.00 44.80 3.71
1379 1381 4.590850 ATCGCTTTTGCTTTCTTTTCCT 57.409 36.364 0.00 0.00 44.80 3.36
1380 1382 4.150627 GGAATCGCTTTTGCTTTCTTTTCC 59.849 41.667 0.00 0.00 44.80 3.13
1381 1383 4.150627 GGGAATCGCTTTTGCTTTCTTTTC 59.849 41.667 0.00 0.00 44.80 2.29
1382 1384 4.058124 GGGAATCGCTTTTGCTTTCTTTT 58.942 39.130 0.00 0.00 44.80 2.27
1383 1385 3.653344 GGGAATCGCTTTTGCTTTCTTT 58.347 40.909 0.00 0.00 44.80 2.52
1384 1386 2.351738 CGGGAATCGCTTTTGCTTTCTT 60.352 45.455 0.00 0.00 44.80 2.52
1385 1387 1.200020 CGGGAATCGCTTTTGCTTTCT 59.800 47.619 0.00 0.00 44.80 2.52
1386 1388 1.068541 ACGGGAATCGCTTTTGCTTTC 60.069 47.619 0.00 0.00 44.80 2.62
1387 1389 0.958822 ACGGGAATCGCTTTTGCTTT 59.041 45.000 0.00 0.00 44.80 3.51
1388 1390 1.737793 CTACGGGAATCGCTTTTGCTT 59.262 47.619 0.00 0.00 44.80 3.91
1389 1391 1.338769 ACTACGGGAATCGCTTTTGCT 60.339 47.619 0.00 0.00 44.80 3.91
1390 1392 1.084289 ACTACGGGAATCGCTTTTGC 58.916 50.000 0.00 0.00 43.89 3.68
1391 1393 2.284417 GCTACTACGGGAATCGCTTTTG 59.716 50.000 0.00 0.00 43.89 2.44
1392 1394 2.547826 GCTACTACGGGAATCGCTTTT 58.452 47.619 0.00 0.00 43.89 2.27
1393 1395 1.535437 CGCTACTACGGGAATCGCTTT 60.535 52.381 0.00 0.00 43.89 3.51
1394 1396 0.030369 CGCTACTACGGGAATCGCTT 59.970 55.000 0.00 0.00 43.89 4.68
1395 1397 1.653115 CGCTACTACGGGAATCGCT 59.347 57.895 0.00 0.00 43.89 4.93
1396 1398 4.223514 CGCTACTACGGGAATCGC 57.776 61.111 0.00 0.00 43.89 4.58
1404 1406 1.074319 TTTTGCTCGCCGCTACTACG 61.074 55.000 0.00 0.00 40.11 3.51
1405 1407 1.004927 CATTTTGCTCGCCGCTACTAC 60.005 52.381 0.00 0.00 40.11 2.73
1406 1408 1.286501 CATTTTGCTCGCCGCTACTA 58.713 50.000 0.00 0.00 40.11 1.82
1409 1411 2.112198 CCCATTTTGCTCGCCGCTA 61.112 57.895 0.00 0.00 40.11 4.26
1413 1415 2.275547 CTGCTCCCATTTTGCTCGCC 62.276 60.000 0.00 0.00 0.00 5.54
1421 1423 1.852633 GGTTTAGGCTGCTCCCATTT 58.147 50.000 0.00 0.00 34.51 2.32
1423 1425 1.224592 CGGTTTAGGCTGCTCCCAT 59.775 57.895 0.00 0.00 34.51 4.00
1424 1426 2.221299 ACGGTTTAGGCTGCTCCCA 61.221 57.895 0.00 0.00 34.51 4.37
1425 1427 1.745489 CACGGTTTAGGCTGCTCCC 60.745 63.158 0.00 0.00 34.51 4.30
1426 1428 0.321298 TTCACGGTTTAGGCTGCTCC 60.321 55.000 0.00 0.00 0.00 4.70
1427 1429 1.519408 TTTCACGGTTTAGGCTGCTC 58.481 50.000 0.00 0.00 0.00 4.26
1428 1430 1.975660 TTTTCACGGTTTAGGCTGCT 58.024 45.000 0.00 0.00 0.00 4.24
1429 1431 2.595386 CATTTTCACGGTTTAGGCTGC 58.405 47.619 0.00 0.00 0.00 5.25
1430 1432 2.094752 CCCATTTTCACGGTTTAGGCTG 60.095 50.000 0.00 0.00 0.00 4.85
1431 1433 2.167662 CCCATTTTCACGGTTTAGGCT 58.832 47.619 0.00 0.00 0.00 4.58
1432 1434 1.203758 CCCCATTTTCACGGTTTAGGC 59.796 52.381 0.00 0.00 0.00 3.93
1433 1435 2.521126 ACCCCATTTTCACGGTTTAGG 58.479 47.619 0.00 0.00 0.00 2.69
1434 1436 3.692593 CCTACCCCATTTTCACGGTTTAG 59.307 47.826 0.00 0.00 0.00 1.85
1435 1437 3.688235 CCTACCCCATTTTCACGGTTTA 58.312 45.455 0.00 0.00 0.00 2.01
1436 1438 2.521126 CCTACCCCATTTTCACGGTTT 58.479 47.619 0.00 0.00 0.00 3.27
1437 1439 1.889262 GCCTACCCCATTTTCACGGTT 60.889 52.381 0.00 0.00 0.00 4.44
1439 1441 1.035385 GGCCTACCCCATTTTCACGG 61.035 60.000 0.00 0.00 0.00 4.94
1441 1443 1.272480 ACTGGCCTACCCCATTTTCAC 60.272 52.381 3.32 0.00 33.64 3.18
1442 1444 1.080638 ACTGGCCTACCCCATTTTCA 58.919 50.000 3.32 0.00 33.64 2.69
1443 1445 2.508300 TCTACTGGCCTACCCCATTTTC 59.492 50.000 3.32 0.00 33.64 2.29
1444 1446 2.568979 TCTACTGGCCTACCCCATTTT 58.431 47.619 3.32 0.00 33.64 1.82
1445 1447 2.280308 TCTACTGGCCTACCCCATTT 57.720 50.000 3.32 0.00 33.64 2.32
1446 1448 2.280308 TTCTACTGGCCTACCCCATT 57.720 50.000 3.32 0.00 33.64 3.16
1447 1449 2.339769 GATTCTACTGGCCTACCCCAT 58.660 52.381 3.32 0.00 33.64 4.00
1449 1451 1.057471 GGATTCTACTGGCCTACCCC 58.943 60.000 3.32 0.00 33.59 4.95
1451 1453 0.033642 GCGGATTCTACTGGCCTACC 59.966 60.000 3.32 0.00 0.00 3.18
1543 1550 0.322906 GGGAACAGGGAAAGAGCTGG 60.323 60.000 0.00 0.00 0.00 4.85
1578 1587 1.944024 AGCGACCAAATGACGTTTCAA 59.056 42.857 0.00 0.00 34.61 2.69
1828 1843 0.041312 CACCACCGCTTTCAAGAACG 60.041 55.000 0.00 0.00 0.00 3.95
1876 1891 0.324091 CCCAAGAGCCTGGCATCTTT 60.324 55.000 22.65 6.32 33.51 2.52
2010 2025 0.179076 CGAGCACATGGAGGCATACA 60.179 55.000 0.00 0.00 0.00 2.29
2036 2051 5.426833 ACTTCTCCAACAAGGTATATGAGCT 59.573 40.000 0.00 0.00 39.02 4.09
2210 2228 1.836166 CATCTCACCCACTCAGGACAT 59.164 52.381 0.00 0.00 41.22 3.06
2281 2299 4.894201 CCTGATGGCTGGGTCATC 57.106 61.111 5.32 5.32 44.00 2.92
2332 2350 1.451387 CCCGGCGCTTGAAATAGGT 60.451 57.895 7.64 0.00 0.00 3.08



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.