Multiple sequence alignment - TraesCS4D01G150200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G150200 chr4D 100.000 5363 0 0 1 5363 166542875 166548237 0.000000e+00 9904.0
1 TraesCS4D01G150200 chr4D 100.000 33 0 0 1040 1072 235447309 235447277 1.610000e-05 62.1
2 TraesCS4D01G150200 chr4B 97.095 2134 51 8 413 2542 222563641 222561515 0.000000e+00 3587.0
3 TraesCS4D01G150200 chr4B 93.262 1677 58 24 3566 5213 222544852 222543202 0.000000e+00 2420.0
4 TraesCS4D01G150200 chr4B 93.023 1677 62 24 3566 5213 222560161 222558511 0.000000e+00 2398.0
5 TraesCS4D01G150200 chr4B 89.381 970 69 19 2554 3497 222545807 222544846 0.000000e+00 1190.0
6 TraesCS4D01G150200 chr4B 89.381 970 69 19 2554 3497 222561116 222560155 0.000000e+00 1190.0
7 TraesCS4D01G150200 chr4A 96.150 1922 47 7 623 2541 294295775 294297672 0.000000e+00 3114.0
8 TraesCS4D01G150200 chr4A 90.847 1890 94 24 3537 5361 294299698 294301573 0.000000e+00 2459.0
9 TraesCS4D01G150200 chr4A 87.520 617 47 16 2947 3539 294297693 294298303 0.000000e+00 686.0
10 TraesCS4D01G150200 chr2D 80.435 92 17 1 3381 3471 591920492 591920401 9.640000e-08 69.4
11 TraesCS4D01G150200 chr5A 97.297 37 0 1 1036 1072 258789296 258789261 1.610000e-05 62.1
12 TraesCS4D01G150200 chr7D 100.000 32 0 0 1041 1072 205117315 205117284 5.800000e-05 60.2
13 TraesCS4D01G150200 chr7D 100.000 28 0 0 4914 4941 442689089 442689116 1.000000e-02 52.8
14 TraesCS4D01G150200 chr7A 97.143 35 1 0 1038 1072 525319888 525319922 5.800000e-05 60.2
15 TraesCS4D01G150200 chr6D 100.000 32 0 0 1041 1072 350884501 350884470 5.800000e-05 60.2
16 TraesCS4D01G150200 chr3A 97.143 35 1 0 1038 1072 143994560 143994594 5.800000e-05 60.2
17 TraesCS4D01G150200 chr2A 97.143 35 1 0 1038 1072 344841439 344841473 5.800000e-05 60.2
18 TraesCS4D01G150200 chr3D 92.308 39 3 0 3421 3459 608565035 608564997 7.500000e-04 56.5
19 TraesCS4D01G150200 chr7B 100.000 28 0 0 4914 4941 460106795 460106822 1.000000e-02 52.8
20 TraesCS4D01G150200 chr7B 100.000 28 0 0 4914 4941 460248735 460248762 1.000000e-02 52.8
21 TraesCS4D01G150200 chr7B 100.000 28 0 0 4914 4941 460253001 460253028 1.000000e-02 52.8
22 TraesCS4D01G150200 chr1A 96.774 31 1 0 4914 4944 545330912 545330882 1.000000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G150200 chr4D 166542875 166548237 5362 False 9904.000000 9904 100.000000 1 5363 1 chr4D.!!$F1 5362
1 TraesCS4D01G150200 chr4B 222558511 222563641 5130 True 2391.666667 3587 93.166333 413 5213 3 chr4B.!!$R2 4800
2 TraesCS4D01G150200 chr4B 222543202 222545807 2605 True 1805.000000 2420 91.321500 2554 5213 2 chr4B.!!$R1 2659
3 TraesCS4D01G150200 chr4A 294295775 294301573 5798 False 2086.333333 3114 91.505667 623 5361 3 chr4A.!!$F1 4738

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
189 190 0.031314 GCTCATCGCCGAGATCTTCA 59.969 55.0 0.00 0.0 37.52 3.02 F
1365 1369 0.035820 TTAACCTCTCCGGCGCATTT 60.036 50.0 10.83 0.0 35.61 2.32 F
2692 3090 0.106167 GGCCCCTTCCCCAAGTTATC 60.106 60.0 0.00 0.0 0.00 1.75 F
3064 3478 0.320697 GAGGTGGTGGCGTAGAAACT 59.679 55.0 0.00 0.0 0.00 2.66 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2019 2023 3.511595 TCGTAGTACGCCGGCAGG 61.512 66.667 28.98 14.14 42.21 4.85 R
2954 3352 0.679505 GCTCCCACGGACTATGCATA 59.320 55.000 6.20 6.20 0.00 3.14 R
4305 6128 2.434843 CCTCGCCACCTCTGCCATA 61.435 63.158 0.00 0.00 0.00 2.74 R
4633 6456 3.057596 CACACAAGTATGGCCGTTGATTT 60.058 43.478 0.77 0.00 0.00 2.17 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 4.875544 TGTTCACTTTCCTTCTTGTTCG 57.124 40.909 0.00 0.00 0.00 3.95
25 26 3.625764 TGTTCACTTTCCTTCTTGTTCGG 59.374 43.478 0.00 0.00 0.00 4.30
26 27 2.846193 TCACTTTCCTTCTTGTTCGGG 58.154 47.619 0.00 0.00 0.00 5.14
27 28 2.436542 TCACTTTCCTTCTTGTTCGGGA 59.563 45.455 0.00 0.00 0.00 5.14
28 29 3.118186 TCACTTTCCTTCTTGTTCGGGAA 60.118 43.478 0.00 0.00 36.25 3.97
29 30 3.630312 CACTTTCCTTCTTGTTCGGGAAA 59.370 43.478 0.00 0.00 43.02 3.13
30 31 3.630769 ACTTTCCTTCTTGTTCGGGAAAC 59.369 43.478 0.00 0.00 41.21 2.78
31 32 3.570912 TTCCTTCTTGTTCGGGAAACT 57.429 42.857 0.00 0.00 38.76 2.66
32 33 2.846193 TCCTTCTTGTTCGGGAAACTG 58.154 47.619 0.00 0.00 38.76 3.16
33 34 1.266989 CCTTCTTGTTCGGGAAACTGC 59.733 52.381 0.00 0.00 38.76 4.40
34 35 2.222027 CTTCTTGTTCGGGAAACTGCT 58.778 47.619 0.00 0.00 38.76 4.24
35 36 2.341846 TCTTGTTCGGGAAACTGCTT 57.658 45.000 0.00 0.00 38.76 3.91
36 37 2.650322 TCTTGTTCGGGAAACTGCTTT 58.350 42.857 0.00 0.00 38.76 3.51
37 38 2.616842 TCTTGTTCGGGAAACTGCTTTC 59.383 45.455 0.00 0.00 38.76 2.62
38 39 2.045561 TGTTCGGGAAACTGCTTTCA 57.954 45.000 1.41 0.00 38.04 2.69
39 40 2.370349 TGTTCGGGAAACTGCTTTCAA 58.630 42.857 1.41 0.00 38.04 2.69
40 41 2.098443 TGTTCGGGAAACTGCTTTCAAC 59.902 45.455 1.41 0.00 38.04 3.18
41 42 2.045561 TCGGGAAACTGCTTTCAACA 57.954 45.000 1.41 0.00 38.04 3.33
42 43 2.582052 TCGGGAAACTGCTTTCAACAT 58.418 42.857 1.41 0.00 38.04 2.71
43 44 3.745799 TCGGGAAACTGCTTTCAACATA 58.254 40.909 1.41 0.00 38.04 2.29
44 45 3.500680 TCGGGAAACTGCTTTCAACATAC 59.499 43.478 1.41 0.00 38.04 2.39
45 46 3.502211 CGGGAAACTGCTTTCAACATACT 59.498 43.478 1.41 0.00 38.04 2.12
46 47 4.613622 CGGGAAACTGCTTTCAACATACTG 60.614 45.833 1.41 0.00 38.04 2.74
47 48 4.278419 GGGAAACTGCTTTCAACATACTGT 59.722 41.667 1.41 0.00 38.04 3.55
48 49 5.221244 GGGAAACTGCTTTCAACATACTGTT 60.221 40.000 1.41 0.00 42.08 3.16
49 50 6.273071 GGAAACTGCTTTCAACATACTGTTT 58.727 36.000 1.41 0.00 38.77 2.83
50 51 6.417930 GGAAACTGCTTTCAACATACTGTTTC 59.582 38.462 12.51 12.51 38.77 2.78
51 52 5.438761 ACTGCTTTCAACATACTGTTTCC 57.561 39.130 0.00 0.00 38.77 3.13
52 53 4.278419 ACTGCTTTCAACATACTGTTTCCC 59.722 41.667 0.00 0.00 38.77 3.97
53 54 4.211125 TGCTTTCAACATACTGTTTCCCA 58.789 39.130 0.00 0.00 38.77 4.37
73 74 3.272574 AGTGATGCTGAGTACCATTGG 57.727 47.619 0.00 0.00 0.00 3.16
74 75 2.092753 AGTGATGCTGAGTACCATTGGG 60.093 50.000 7.78 0.00 41.29 4.12
75 76 1.312815 GATGCTGAGTACCATTGGGC 58.687 55.000 7.78 0.00 37.90 5.36
76 77 0.921896 ATGCTGAGTACCATTGGGCT 59.078 50.000 7.78 4.70 37.90 5.19
77 78 0.253044 TGCTGAGTACCATTGGGCTC 59.747 55.000 17.46 17.46 37.90 4.70
78 79 0.253044 GCTGAGTACCATTGGGCTCA 59.747 55.000 22.47 22.47 36.83 4.26
79 80 2.014068 GCTGAGTACCATTGGGCTCAC 61.014 57.143 21.01 15.94 35.27 3.51
80 81 1.278985 CTGAGTACCATTGGGCTCACA 59.721 52.381 21.01 9.67 35.27 3.58
81 82 1.278985 TGAGTACCATTGGGCTCACAG 59.721 52.381 21.01 0.00 35.27 3.66
82 83 0.620556 AGTACCATTGGGCTCACAGG 59.379 55.000 7.78 1.92 37.90 4.00
83 84 0.618458 GTACCATTGGGCTCACAGGA 59.382 55.000 10.38 0.00 37.90 3.86
84 85 0.911769 TACCATTGGGCTCACAGGAG 59.088 55.000 10.38 0.00 44.33 3.69
94 95 4.806936 CACAGGAGCATGTGGTGT 57.193 55.556 7.34 0.00 45.53 4.16
95 96 2.548178 CACAGGAGCATGTGGTGTC 58.452 57.895 7.34 0.00 45.53 3.67
96 97 0.035881 CACAGGAGCATGTGGTGTCT 59.964 55.000 7.34 0.00 45.53 3.41
97 98 1.276138 CACAGGAGCATGTGGTGTCTA 59.724 52.381 7.34 0.00 45.53 2.59
98 99 2.093288 CACAGGAGCATGTGGTGTCTAT 60.093 50.000 7.34 0.00 45.53 1.98
99 100 2.093288 ACAGGAGCATGTGGTGTCTATG 60.093 50.000 0.00 0.00 30.46 2.23
100 101 1.134280 AGGAGCATGTGGTGTCTATGC 60.134 52.381 0.00 0.00 45.64 3.14
104 105 3.344904 GCATGTGGTGTCTATGCATTC 57.655 47.619 3.54 0.00 44.88 2.67
105 106 2.684374 GCATGTGGTGTCTATGCATTCA 59.316 45.455 3.54 0.00 44.88 2.57
106 107 3.317149 GCATGTGGTGTCTATGCATTCAT 59.683 43.478 3.54 0.00 44.88 2.57
107 108 4.791734 GCATGTGGTGTCTATGCATTCATG 60.792 45.833 3.54 8.51 44.88 3.07
108 109 3.954200 TGTGGTGTCTATGCATTCATGT 58.046 40.909 3.54 0.00 34.22 3.21
109 110 3.690628 TGTGGTGTCTATGCATTCATGTG 59.309 43.478 3.54 0.00 34.22 3.21
110 111 2.684374 TGGTGTCTATGCATTCATGTGC 59.316 45.455 3.54 1.45 45.25 4.57
111 112 2.947652 GGTGTCTATGCATTCATGTGCT 59.052 45.455 3.54 0.00 45.27 4.40
112 113 3.379372 GGTGTCTATGCATTCATGTGCTT 59.621 43.478 3.54 6.01 45.27 3.91
113 114 4.497006 GGTGTCTATGCATTCATGTGCTTC 60.497 45.833 3.54 0.00 45.27 3.86
114 115 4.095334 GTGTCTATGCATTCATGTGCTTCA 59.905 41.667 3.54 0.00 45.27 3.02
115 116 4.885325 TGTCTATGCATTCATGTGCTTCAT 59.115 37.500 3.54 3.50 45.27 2.57
116 117 5.358725 TGTCTATGCATTCATGTGCTTCATT 59.641 36.000 3.54 0.00 45.27 2.57
117 118 5.685954 GTCTATGCATTCATGTGCTTCATTG 59.314 40.000 3.54 2.67 45.27 2.82
118 119 3.945981 TGCATTCATGTGCTTCATTGT 57.054 38.095 9.44 0.00 45.27 2.71
119 120 4.260139 TGCATTCATGTGCTTCATTGTT 57.740 36.364 9.44 0.00 45.27 2.83
120 121 4.239304 TGCATTCATGTGCTTCATTGTTC 58.761 39.130 9.44 0.00 45.27 3.18
121 122 4.021807 TGCATTCATGTGCTTCATTGTTCT 60.022 37.500 9.44 0.00 45.27 3.01
122 123 4.927425 GCATTCATGTGCTTCATTGTTCTT 59.073 37.500 1.20 0.00 41.82 2.52
123 124 5.061808 GCATTCATGTGCTTCATTGTTCTTC 59.938 40.000 1.20 0.00 41.82 2.87
124 125 6.387465 CATTCATGTGCTTCATTGTTCTTCT 58.613 36.000 0.00 0.00 34.09 2.85
125 126 5.366829 TCATGTGCTTCATTGTTCTTCTG 57.633 39.130 0.00 0.00 34.09 3.02
126 127 4.823442 TCATGTGCTTCATTGTTCTTCTGT 59.177 37.500 0.00 0.00 34.09 3.41
127 128 5.300034 TCATGTGCTTCATTGTTCTTCTGTT 59.700 36.000 0.00 0.00 34.09 3.16
128 129 5.173774 TGTGCTTCATTGTTCTTCTGTTC 57.826 39.130 0.00 0.00 0.00 3.18
129 130 4.214437 GTGCTTCATTGTTCTTCTGTTCG 58.786 43.478 0.00 0.00 0.00 3.95
130 131 3.876914 TGCTTCATTGTTCTTCTGTTCGT 59.123 39.130 0.00 0.00 0.00 3.85
131 132 4.024893 TGCTTCATTGTTCTTCTGTTCGTC 60.025 41.667 0.00 0.00 0.00 4.20
132 133 4.212214 GCTTCATTGTTCTTCTGTTCGTCT 59.788 41.667 0.00 0.00 0.00 4.18
133 134 5.405571 GCTTCATTGTTCTTCTGTTCGTCTA 59.594 40.000 0.00 0.00 0.00 2.59
134 135 6.616682 GCTTCATTGTTCTTCTGTTCGTCTAC 60.617 42.308 0.00 0.00 0.00 2.59
135 136 6.085555 TCATTGTTCTTCTGTTCGTCTACT 57.914 37.500 0.00 0.00 0.00 2.57
136 137 6.513180 TCATTGTTCTTCTGTTCGTCTACTT 58.487 36.000 0.00 0.00 0.00 2.24
137 138 7.654568 TCATTGTTCTTCTGTTCGTCTACTTA 58.345 34.615 0.00 0.00 0.00 2.24
138 139 8.139350 TCATTGTTCTTCTGTTCGTCTACTTAA 58.861 33.333 0.00 0.00 0.00 1.85
139 140 7.925703 TTGTTCTTCTGTTCGTCTACTTAAG 57.074 36.000 0.00 0.00 0.00 1.85
140 141 7.268199 TGTTCTTCTGTTCGTCTACTTAAGA 57.732 36.000 10.09 0.00 0.00 2.10
141 142 7.361127 TGTTCTTCTGTTCGTCTACTTAAGAG 58.639 38.462 10.09 2.64 33.88 2.85
142 143 7.013083 TGTTCTTCTGTTCGTCTACTTAAGAGT 59.987 37.037 10.09 0.00 39.97 3.24
143 144 6.900189 TCTTCTGTTCGTCTACTTAAGAGTG 58.100 40.000 10.09 0.00 36.60 3.51
144 145 5.044428 TCTGTTCGTCTACTTAAGAGTGC 57.956 43.478 10.09 0.00 36.60 4.40
145 146 4.082895 TCTGTTCGTCTACTTAAGAGTGCC 60.083 45.833 10.09 0.00 36.60 5.01
146 147 3.169733 GTTCGTCTACTTAAGAGTGCCG 58.830 50.000 10.09 4.91 36.60 5.69
147 148 1.741706 TCGTCTACTTAAGAGTGCCGG 59.258 52.381 10.09 0.00 36.60 6.13
148 149 1.741706 CGTCTACTTAAGAGTGCCGGA 59.258 52.381 5.05 0.00 36.60 5.14
149 150 2.223294 CGTCTACTTAAGAGTGCCGGAG 60.223 54.545 5.05 0.00 36.60 4.63
150 151 3.015327 GTCTACTTAAGAGTGCCGGAGA 58.985 50.000 5.05 0.00 36.60 3.71
151 152 3.015327 TCTACTTAAGAGTGCCGGAGAC 58.985 50.000 5.05 0.00 36.60 3.36
152 153 0.526662 ACTTAAGAGTGCCGGAGACG 59.473 55.000 5.05 0.00 44.38 4.18
153 154 1.885359 ACTTAAGAGTGCCGGAGACGA 60.885 52.381 5.05 0.00 46.52 4.20
154 155 3.398062 ACTTAAGAGTGCCGGAGACGAA 61.398 50.000 5.05 0.00 46.52 3.85
155 156 4.866858 ACTTAAGAGTGCCGGAGACGAAA 61.867 47.826 5.05 0.00 46.52 3.46
156 157 6.631250 ACTTAAGAGTGCCGGAGACGAAAG 62.631 50.000 5.05 7.29 46.52 2.62
173 174 2.690367 AGGTCTTCCCTTGGAGCTC 58.310 57.895 4.71 4.71 42.73 4.09
174 175 0.178891 AGGTCTTCCCTTGGAGCTCA 60.179 55.000 17.19 0.00 42.73 4.26
175 176 0.915364 GGTCTTCCCTTGGAGCTCAT 59.085 55.000 17.19 0.00 31.21 2.90
176 177 1.134250 GGTCTTCCCTTGGAGCTCATC 60.134 57.143 17.19 0.00 31.21 2.92
177 178 0.826715 TCTTCCCTTGGAGCTCATCG 59.173 55.000 17.19 2.13 31.21 3.84
178 179 0.813210 CTTCCCTTGGAGCTCATCGC 60.813 60.000 17.19 0.00 39.57 4.58
179 180 2.203126 CCCTTGGAGCTCATCGCC 60.203 66.667 17.19 0.00 40.39 5.54
180 181 2.587194 CCTTGGAGCTCATCGCCG 60.587 66.667 17.19 0.00 40.39 6.46
181 182 2.496341 CTTGGAGCTCATCGCCGA 59.504 61.111 17.19 0.00 40.39 5.54
182 183 1.591059 CTTGGAGCTCATCGCCGAG 60.591 63.158 17.19 3.51 39.36 4.63
183 184 2.009424 CTTGGAGCTCATCGCCGAGA 62.009 60.000 17.19 0.00 45.91 4.04
184 185 1.395045 TTGGAGCTCATCGCCGAGAT 61.395 55.000 17.19 0.00 41.01 2.75
185 186 1.080839 GGAGCTCATCGCCGAGATC 60.081 63.158 17.19 9.79 45.62 2.75
186 187 1.523154 GGAGCTCATCGCCGAGATCT 61.523 60.000 17.19 0.00 45.63 2.75
187 188 0.313672 GAGCTCATCGCCGAGATCTT 59.686 55.000 9.40 0.00 43.53 2.40
188 189 0.313672 AGCTCATCGCCGAGATCTTC 59.686 55.000 0.00 0.00 37.52 2.87
189 190 0.031314 GCTCATCGCCGAGATCTTCA 59.969 55.000 0.00 0.00 37.52 3.02
190 191 1.536922 GCTCATCGCCGAGATCTTCAA 60.537 52.381 0.00 0.00 37.52 2.69
191 192 2.814269 CTCATCGCCGAGATCTTCAAA 58.186 47.619 0.00 0.00 37.52 2.69
192 193 3.190079 CTCATCGCCGAGATCTTCAAAA 58.810 45.455 0.00 0.00 37.52 2.44
193 194 3.797039 TCATCGCCGAGATCTTCAAAAT 58.203 40.909 0.00 0.00 37.52 1.82
194 195 4.191544 TCATCGCCGAGATCTTCAAAATT 58.808 39.130 0.00 0.00 37.52 1.82
195 196 4.635765 TCATCGCCGAGATCTTCAAAATTT 59.364 37.500 0.00 0.00 37.52 1.82
196 197 4.600012 TCGCCGAGATCTTCAAAATTTC 57.400 40.909 0.00 0.00 0.00 2.17
197 198 4.000325 TCGCCGAGATCTTCAAAATTTCA 59.000 39.130 0.00 0.00 0.00 2.69
198 199 4.454161 TCGCCGAGATCTTCAAAATTTCAA 59.546 37.500 0.00 0.00 0.00 2.69
199 200 4.790140 CGCCGAGATCTTCAAAATTTCAAG 59.210 41.667 0.00 0.00 0.00 3.02
200 201 5.098211 GCCGAGATCTTCAAAATTTCAAGG 58.902 41.667 0.00 0.00 0.00 3.61
201 202 5.106157 GCCGAGATCTTCAAAATTTCAAGGA 60.106 40.000 0.00 0.22 0.00 3.36
202 203 6.570378 GCCGAGATCTTCAAAATTTCAAGGAA 60.570 38.462 0.00 3.41 0.00 3.36
203 204 7.025963 CCGAGATCTTCAAAATTTCAAGGAAG 58.974 38.462 0.00 12.19 37.03 3.46
204 205 7.025963 CGAGATCTTCAAAATTTCAAGGAAGG 58.974 38.462 15.71 3.41 36.50 3.46
205 206 7.094634 CGAGATCTTCAAAATTTCAAGGAAGGA 60.095 37.037 15.71 8.11 36.50 3.36
206 207 8.482852 AGATCTTCAAAATTTCAAGGAAGGAA 57.517 30.769 15.71 4.91 36.50 3.36
207 208 9.097946 AGATCTTCAAAATTTCAAGGAAGGAAT 57.902 29.630 15.71 7.96 36.50 3.01
208 209 9.148104 GATCTTCAAAATTTCAAGGAAGGAATG 57.852 33.333 15.71 0.00 36.50 2.67
209 210 8.021898 TCTTCAAAATTTCAAGGAAGGAATGT 57.978 30.769 15.71 0.00 36.50 2.71
210 211 8.143835 TCTTCAAAATTTCAAGGAAGGAATGTC 58.856 33.333 15.71 0.00 36.50 3.06
211 212 7.601705 TCAAAATTTCAAGGAAGGAATGTCT 57.398 32.000 0.00 0.00 0.00 3.41
212 213 8.704849 TCAAAATTTCAAGGAAGGAATGTCTA 57.295 30.769 0.00 0.00 0.00 2.59
213 214 9.312904 TCAAAATTTCAAGGAAGGAATGTCTAT 57.687 29.630 0.00 0.00 0.00 1.98
217 218 7.843490 TTTCAAGGAAGGAATGTCTATAACG 57.157 36.000 0.00 0.00 0.00 3.18
218 219 5.914033 TCAAGGAAGGAATGTCTATAACGG 58.086 41.667 0.00 0.00 0.00 4.44
219 220 5.659525 TCAAGGAAGGAATGTCTATAACGGA 59.340 40.000 0.00 0.00 0.00 4.69
220 221 6.155565 TCAAGGAAGGAATGTCTATAACGGAA 59.844 38.462 0.00 0.00 0.00 4.30
221 222 6.555463 AGGAAGGAATGTCTATAACGGAAA 57.445 37.500 0.00 0.00 0.00 3.13
222 223 6.346896 AGGAAGGAATGTCTATAACGGAAAC 58.653 40.000 0.00 0.00 0.00 2.78
223 224 6.070424 AGGAAGGAATGTCTATAACGGAAACA 60.070 38.462 0.00 0.00 0.00 2.83
224 225 6.036844 GGAAGGAATGTCTATAACGGAAACAC 59.963 42.308 0.00 0.00 0.00 3.32
225 226 6.045072 AGGAATGTCTATAACGGAAACACA 57.955 37.500 0.00 0.00 0.00 3.72
226 227 6.469410 AGGAATGTCTATAACGGAAACACAA 58.531 36.000 0.00 0.00 0.00 3.33
227 228 7.110155 AGGAATGTCTATAACGGAAACACAAT 58.890 34.615 0.00 0.00 0.00 2.71
228 229 7.065803 AGGAATGTCTATAACGGAAACACAATG 59.934 37.037 0.00 0.00 0.00 2.82
229 230 7.148306 GGAATGTCTATAACGGAAACACAATGT 60.148 37.037 0.00 0.00 0.00 2.71
230 231 7.681939 ATGTCTATAACGGAAACACAATGTT 57.318 32.000 0.00 0.00 43.41 2.71
231 232 7.124347 TGTCTATAACGGAAACACAATGTTC 57.876 36.000 0.00 0.00 40.14 3.18
232 233 6.706716 TGTCTATAACGGAAACACAATGTTCA 59.293 34.615 0.00 0.00 40.14 3.18
233 234 7.095397 TGTCTATAACGGAAACACAATGTTCAG 60.095 37.037 0.00 0.00 40.14 3.02
234 235 3.708563 AACGGAAACACAATGTTCAGG 57.291 42.857 0.00 0.00 40.14 3.86
235 236 1.953686 ACGGAAACACAATGTTCAGGG 59.046 47.619 0.00 0.00 40.14 4.45
236 237 1.335872 CGGAAACACAATGTTCAGGGC 60.336 52.381 0.00 0.00 40.14 5.19
237 238 1.963515 GGAAACACAATGTTCAGGGCT 59.036 47.619 0.00 0.00 40.14 5.19
238 239 2.288395 GGAAACACAATGTTCAGGGCTG 60.288 50.000 0.00 0.00 40.14 4.85
239 240 2.363306 AACACAATGTTCAGGGCTGA 57.637 45.000 0.00 0.00 35.27 4.26
240 241 2.363306 ACACAATGTTCAGGGCTGAA 57.637 45.000 0.00 0.00 46.27 3.02
246 247 4.500265 TTCAGGGCTGAAGGCAAC 57.500 55.556 6.20 0.00 43.90 4.17
247 248 1.536180 TTCAGGGCTGAAGGCAACA 59.464 52.632 6.20 0.00 43.90 3.33
248 249 0.823356 TTCAGGGCTGAAGGCAACAC 60.823 55.000 6.20 0.00 43.90 3.32
249 250 1.529010 CAGGGCTGAAGGCAACACA 60.529 57.895 6.20 0.00 44.01 3.72
250 251 1.108727 CAGGGCTGAAGGCAACACAA 61.109 55.000 6.20 0.00 44.01 3.33
251 252 0.825010 AGGGCTGAAGGCAACACAAG 60.825 55.000 6.20 0.00 44.01 3.16
252 253 1.006922 GGCTGAAGGCAACACAAGC 60.007 57.895 0.00 0.00 44.01 4.01
253 254 1.458639 GGCTGAAGGCAACACAAGCT 61.459 55.000 0.00 0.00 44.01 3.74
254 255 0.318445 GCTGAAGGCAACACAAGCTG 60.318 55.000 0.00 0.00 41.35 4.24
255 256 1.311859 CTGAAGGCAACACAAGCTGA 58.688 50.000 0.00 0.00 41.41 4.26
256 257 1.266175 CTGAAGGCAACACAAGCTGAG 59.734 52.381 0.00 0.00 41.41 3.35
257 258 1.312815 GAAGGCAACACAAGCTGAGT 58.687 50.000 0.00 0.00 41.41 3.41
258 259 1.002033 GAAGGCAACACAAGCTGAGTG 60.002 52.381 15.76 15.76 42.56 3.51
259 260 1.008079 GGCAACACAAGCTGAGTGC 60.008 57.895 16.92 8.98 40.59 4.40
270 271 0.447011 GCTGAGTGCTCAATGTCTGC 59.553 55.000 3.36 0.00 39.39 4.26
271 272 1.944892 GCTGAGTGCTCAATGTCTGCT 60.945 52.381 3.36 0.00 39.39 4.24
272 273 2.424557 CTGAGTGCTCAATGTCTGCTT 58.575 47.619 3.36 0.00 39.39 3.91
273 274 2.148768 TGAGTGCTCAATGTCTGCTTG 58.851 47.619 0.00 0.00 36.53 4.01
274 275 0.879765 AGTGCTCAATGTCTGCTTGC 59.120 50.000 0.00 0.00 0.00 4.01
275 276 0.879765 GTGCTCAATGTCTGCTTGCT 59.120 50.000 0.00 0.00 0.00 3.91
276 277 1.135746 GTGCTCAATGTCTGCTTGCTC 60.136 52.381 0.00 0.00 0.00 4.26
277 278 1.271217 TGCTCAATGTCTGCTTGCTCT 60.271 47.619 0.00 0.00 0.00 4.09
278 279 2.027837 TGCTCAATGTCTGCTTGCTCTA 60.028 45.455 0.00 0.00 0.00 2.43
279 280 3.005554 GCTCAATGTCTGCTTGCTCTAA 58.994 45.455 0.00 0.00 0.00 2.10
280 281 3.626670 GCTCAATGTCTGCTTGCTCTAAT 59.373 43.478 0.00 0.00 0.00 1.73
281 282 4.813161 GCTCAATGTCTGCTTGCTCTAATA 59.187 41.667 0.00 0.00 0.00 0.98
282 283 5.469421 GCTCAATGTCTGCTTGCTCTAATAT 59.531 40.000 0.00 0.00 0.00 1.28
283 284 6.566187 GCTCAATGTCTGCTTGCTCTAATATG 60.566 42.308 0.00 0.00 0.00 1.78
284 285 6.351711 TCAATGTCTGCTTGCTCTAATATGT 58.648 36.000 0.00 0.00 0.00 2.29
285 286 6.259387 TCAATGTCTGCTTGCTCTAATATGTG 59.741 38.462 0.00 0.00 0.00 3.21
286 287 5.089970 TGTCTGCTTGCTCTAATATGTGT 57.910 39.130 0.00 0.00 0.00 3.72
287 288 5.111989 TGTCTGCTTGCTCTAATATGTGTC 58.888 41.667 0.00 0.00 0.00 3.67
288 289 4.509600 GTCTGCTTGCTCTAATATGTGTCC 59.490 45.833 0.00 0.00 0.00 4.02
289 290 4.162131 TCTGCTTGCTCTAATATGTGTCCA 59.838 41.667 0.00 0.00 0.00 4.02
290 291 5.039920 TGCTTGCTCTAATATGTGTCCAT 57.960 39.130 0.00 0.00 34.97 3.41
291 292 6.041979 TCTGCTTGCTCTAATATGTGTCCATA 59.958 38.462 0.00 0.00 37.92 2.74
292 293 6.772605 TGCTTGCTCTAATATGTGTCCATAT 58.227 36.000 0.00 0.00 44.40 1.78
293 294 6.652062 TGCTTGCTCTAATATGTGTCCATATG 59.348 38.462 0.00 0.00 42.23 1.78
294 295 6.875726 GCTTGCTCTAATATGTGTCCATATGA 59.124 38.462 3.65 0.00 42.23 2.15
295 296 7.551974 GCTTGCTCTAATATGTGTCCATATGAT 59.448 37.037 3.65 0.00 42.23 2.45
306 307 8.929260 ATGTGTCCATATGATATGACAAATGT 57.071 30.769 13.79 0.00 0.00 2.71
308 309 9.492973 TGTGTCCATATGATATGACAAATGTAG 57.507 33.333 13.79 0.00 0.00 2.74
309 310 8.446273 GTGTCCATATGATATGACAAATGTAGC 58.554 37.037 13.79 0.83 0.00 3.58
310 311 8.377799 TGTCCATATGATATGACAAATGTAGCT 58.622 33.333 13.79 0.00 0.00 3.32
311 312 9.224267 GTCCATATGATATGACAAATGTAGCTT 57.776 33.333 13.79 0.00 0.00 3.74
312 313 9.797642 TCCATATGATATGACAAATGTAGCTTT 57.202 29.630 13.79 0.00 0.00 3.51
313 314 9.836076 CCATATGATATGACAAATGTAGCTTTG 57.164 33.333 13.79 0.00 41.02 2.77
317 318 8.969121 TGATATGACAAATGTAGCTTTGTTTG 57.031 30.769 12.86 12.86 46.50 2.93
318 319 8.575589 TGATATGACAAATGTAGCTTTGTTTGT 58.424 29.630 17.48 17.48 46.50 2.83
319 320 9.410556 GATATGACAAATGTAGCTTTGTTTGTT 57.589 29.630 18.12 10.16 46.50 2.83
320 321 6.884096 TGACAAATGTAGCTTTGTTTGTTG 57.116 33.333 18.12 6.91 46.50 3.33
321 322 6.393990 TGACAAATGTAGCTTTGTTTGTTGT 58.606 32.000 18.12 9.34 46.50 3.32
322 323 6.870965 TGACAAATGTAGCTTTGTTTGTTGTT 59.129 30.769 18.12 2.86 46.50 2.83
323 324 7.059448 ACAAATGTAGCTTTGTTTGTTGTTG 57.941 32.000 13.82 0.00 44.76 3.33
324 325 6.091986 ACAAATGTAGCTTTGTTTGTTGTTGG 59.908 34.615 13.82 0.00 44.76 3.77
325 326 5.590530 ATGTAGCTTTGTTTGTTGTTGGA 57.409 34.783 0.00 0.00 0.00 3.53
326 327 5.590530 TGTAGCTTTGTTTGTTGTTGGAT 57.409 34.783 0.00 0.00 0.00 3.41
327 328 5.971763 TGTAGCTTTGTTTGTTGTTGGATT 58.028 33.333 0.00 0.00 0.00 3.01
328 329 5.809562 TGTAGCTTTGTTTGTTGTTGGATTG 59.190 36.000 0.00 0.00 0.00 2.67
329 330 4.831107 AGCTTTGTTTGTTGTTGGATTGT 58.169 34.783 0.00 0.00 0.00 2.71
330 331 5.244755 AGCTTTGTTTGTTGTTGGATTGTT 58.755 33.333 0.00 0.00 0.00 2.83
331 332 5.704978 AGCTTTGTTTGTTGTTGGATTGTTT 59.295 32.000 0.00 0.00 0.00 2.83
332 333 6.206438 AGCTTTGTTTGTTGTTGGATTGTTTT 59.794 30.769 0.00 0.00 0.00 2.43
333 334 6.522855 GCTTTGTTTGTTGTTGGATTGTTTTC 59.477 34.615 0.00 0.00 0.00 2.29
334 335 5.769967 TGTTTGTTGTTGGATTGTTTTCG 57.230 34.783 0.00 0.00 0.00 3.46
335 336 5.230942 TGTTTGTTGTTGGATTGTTTTCGT 58.769 33.333 0.00 0.00 0.00 3.85
336 337 5.119279 TGTTTGTTGTTGGATTGTTTTCGTG 59.881 36.000 0.00 0.00 0.00 4.35
337 338 4.442375 TGTTGTTGGATTGTTTTCGTGT 57.558 36.364 0.00 0.00 0.00 4.49
338 339 4.810790 TGTTGTTGGATTGTTTTCGTGTT 58.189 34.783 0.00 0.00 0.00 3.32
339 340 5.950883 TGTTGTTGGATTGTTTTCGTGTTA 58.049 33.333 0.00 0.00 0.00 2.41
340 341 6.030849 TGTTGTTGGATTGTTTTCGTGTTAG 58.969 36.000 0.00 0.00 0.00 2.34
341 342 5.821516 TGTTGGATTGTTTTCGTGTTAGT 57.178 34.783 0.00 0.00 0.00 2.24
342 343 6.197364 TGTTGGATTGTTTTCGTGTTAGTT 57.803 33.333 0.00 0.00 0.00 2.24
343 344 7.317842 TGTTGGATTGTTTTCGTGTTAGTTA 57.682 32.000 0.00 0.00 0.00 2.24
344 345 7.411274 TGTTGGATTGTTTTCGTGTTAGTTAG 58.589 34.615 0.00 0.00 0.00 2.34
345 346 7.280428 TGTTGGATTGTTTTCGTGTTAGTTAGA 59.720 33.333 0.00 0.00 0.00 2.10
346 347 7.789273 TGGATTGTTTTCGTGTTAGTTAGAA 57.211 32.000 0.00 0.00 0.00 2.10
347 348 8.211116 TGGATTGTTTTCGTGTTAGTTAGAAA 57.789 30.769 0.00 0.00 0.00 2.52
348 349 8.339714 TGGATTGTTTTCGTGTTAGTTAGAAAG 58.660 33.333 0.00 0.00 34.61 2.62
349 350 8.553696 GGATTGTTTTCGTGTTAGTTAGAAAGA 58.446 33.333 0.00 0.00 34.61 2.52
350 351 9.925268 GATTGTTTTCGTGTTAGTTAGAAAGAA 57.075 29.630 0.00 0.00 34.61 2.52
352 353 9.710979 TTGTTTTCGTGTTAGTTAGAAAGAATG 57.289 29.630 0.00 0.00 34.61 2.67
353 354 9.100554 TGTTTTCGTGTTAGTTAGAAAGAATGA 57.899 29.630 0.00 0.00 34.61 2.57
356 357 7.827819 TCGTGTTAGTTAGAAAGAATGATGG 57.172 36.000 0.00 0.00 0.00 3.51
357 358 7.383687 TCGTGTTAGTTAGAAAGAATGATGGT 58.616 34.615 0.00 0.00 0.00 3.55
358 359 8.525316 TCGTGTTAGTTAGAAAGAATGATGGTA 58.475 33.333 0.00 0.00 0.00 3.25
359 360 8.808529 CGTGTTAGTTAGAAAGAATGATGGTAG 58.191 37.037 0.00 0.00 0.00 3.18
360 361 9.654663 GTGTTAGTTAGAAAGAATGATGGTAGT 57.345 33.333 0.00 0.00 0.00 2.73
361 362 9.653287 TGTTAGTTAGAAAGAATGATGGTAGTG 57.347 33.333 0.00 0.00 0.00 2.74
362 363 8.604890 GTTAGTTAGAAAGAATGATGGTAGTGC 58.395 37.037 0.00 0.00 0.00 4.40
363 364 6.711277 AGTTAGAAAGAATGATGGTAGTGCA 58.289 36.000 0.00 0.00 0.00 4.57
364 365 7.341805 AGTTAGAAAGAATGATGGTAGTGCAT 58.658 34.615 0.00 0.00 0.00 3.96
365 366 7.497249 AGTTAGAAAGAATGATGGTAGTGCATC 59.503 37.037 0.00 0.00 0.00 3.91
366 367 5.999044 AGAAAGAATGATGGTAGTGCATCT 58.001 37.500 0.00 0.00 0.00 2.90
367 368 7.129457 AGAAAGAATGATGGTAGTGCATCTA 57.871 36.000 0.00 0.00 0.00 1.98
368 369 7.215789 AGAAAGAATGATGGTAGTGCATCTAG 58.784 38.462 0.00 0.00 0.00 2.43
369 370 6.491714 AAGAATGATGGTAGTGCATCTAGT 57.508 37.500 0.00 0.00 0.00 2.57
370 371 5.851720 AGAATGATGGTAGTGCATCTAGTG 58.148 41.667 0.00 0.00 0.00 2.74
371 372 4.613925 ATGATGGTAGTGCATCTAGTGG 57.386 45.455 0.00 0.00 0.00 4.00
372 373 3.374764 TGATGGTAGTGCATCTAGTGGT 58.625 45.455 0.00 0.00 0.00 4.16
373 374 3.384789 TGATGGTAGTGCATCTAGTGGTC 59.615 47.826 0.00 0.00 0.00 4.02
374 375 3.101643 TGGTAGTGCATCTAGTGGTCT 57.898 47.619 0.00 0.00 0.00 3.85
375 376 4.245251 TGGTAGTGCATCTAGTGGTCTA 57.755 45.455 0.00 0.00 0.00 2.59
376 377 4.804597 TGGTAGTGCATCTAGTGGTCTAT 58.195 43.478 0.00 0.00 0.00 1.98
377 378 4.827835 TGGTAGTGCATCTAGTGGTCTATC 59.172 45.833 0.00 0.00 0.00 2.08
378 379 5.074115 GGTAGTGCATCTAGTGGTCTATCT 58.926 45.833 0.00 0.00 0.00 1.98
379 380 6.183361 TGGTAGTGCATCTAGTGGTCTATCTA 60.183 42.308 0.00 0.00 0.00 1.98
380 381 6.149807 GGTAGTGCATCTAGTGGTCTATCTAC 59.850 46.154 0.00 0.00 0.00 2.59
381 382 5.947663 AGTGCATCTAGTGGTCTATCTACT 58.052 41.667 0.00 0.00 40.82 2.57
382 383 6.369629 AGTGCATCTAGTGGTCTATCTACTT 58.630 40.000 0.00 0.00 38.73 2.24
383 384 6.488683 AGTGCATCTAGTGGTCTATCTACTTC 59.511 42.308 0.00 0.00 38.73 3.01
384 385 6.263392 GTGCATCTAGTGGTCTATCTACTTCA 59.737 42.308 0.00 0.00 38.73 3.02
385 386 6.488344 TGCATCTAGTGGTCTATCTACTTCAG 59.512 42.308 0.00 0.00 38.73 3.02
386 387 6.488683 GCATCTAGTGGTCTATCTACTTCAGT 59.511 42.308 0.00 0.00 38.73 3.41
387 388 7.013846 GCATCTAGTGGTCTATCTACTTCAGTT 59.986 40.741 0.00 0.00 38.73 3.16
388 389 7.867305 TCTAGTGGTCTATCTACTTCAGTTG 57.133 40.000 0.00 0.00 38.73 3.16
389 390 7.403671 TCTAGTGGTCTATCTACTTCAGTTGT 58.596 38.462 0.00 0.00 38.73 3.32
390 391 8.546322 TCTAGTGGTCTATCTACTTCAGTTGTA 58.454 37.037 0.00 0.00 38.73 2.41
391 392 7.633193 AGTGGTCTATCTACTTCAGTTGTAG 57.367 40.000 0.00 0.00 34.16 2.74
392 393 7.403671 AGTGGTCTATCTACTTCAGTTGTAGA 58.596 38.462 6.14 6.14 46.75 2.59
393 394 7.554835 AGTGGTCTATCTACTTCAGTTGTAGAG 59.445 40.741 9.08 0.00 46.17 2.43
394 395 7.553402 GTGGTCTATCTACTTCAGTTGTAGAGA 59.447 40.741 9.08 4.45 46.17 3.10
395 396 8.275758 TGGTCTATCTACTTCAGTTGTAGAGAT 58.724 37.037 9.08 0.00 46.17 2.75
396 397 9.781633 GGTCTATCTACTTCAGTTGTAGAGATA 57.218 37.037 9.08 0.00 46.17 1.98
400 401 7.323049 TCTACTTCAGTTGTAGAGATACAGC 57.677 40.000 0.00 0.00 40.72 4.40
401 402 5.984695 ACTTCAGTTGTAGAGATACAGCA 57.015 39.130 5.29 0.00 34.26 4.41
402 403 6.346477 ACTTCAGTTGTAGAGATACAGCAA 57.654 37.500 5.29 0.00 34.26 3.91
403 404 6.393990 ACTTCAGTTGTAGAGATACAGCAAG 58.606 40.000 5.29 3.89 34.26 4.01
404 405 6.209589 ACTTCAGTTGTAGAGATACAGCAAGA 59.790 38.462 5.29 0.88 34.26 3.02
405 406 6.590234 TCAGTTGTAGAGATACAGCAAGAA 57.410 37.500 5.29 0.00 34.26 2.52
406 407 6.993079 TCAGTTGTAGAGATACAGCAAGAAA 58.007 36.000 5.29 0.00 34.26 2.52
407 408 7.441836 TCAGTTGTAGAGATACAGCAAGAAAA 58.558 34.615 5.29 0.00 34.26 2.29
408 409 8.097038 TCAGTTGTAGAGATACAGCAAGAAAAT 58.903 33.333 5.29 0.00 34.26 1.82
409 410 8.725148 CAGTTGTAGAGATACAGCAAGAAAATT 58.275 33.333 5.29 0.00 34.26 1.82
410 411 9.289782 AGTTGTAGAGATACAGCAAGAAAATTT 57.710 29.630 5.29 0.00 34.26 1.82
411 412 9.548208 GTTGTAGAGATACAGCAAGAAAATTTC 57.452 33.333 0.00 0.00 32.47 2.17
417 418 6.716628 AGATACAGCAAGAAAATTTCACCTCA 59.283 34.615 8.55 0.00 0.00 3.86
445 446 2.741612 TCCACAAAAATGAAGCAAGCG 58.258 42.857 0.00 0.00 0.00 4.68
517 518 2.434428 AGATGGCTGCTGAAGAAAGTG 58.566 47.619 0.00 0.00 0.00 3.16
519 520 0.179009 TGGCTGCTGAAGAAAGTGCT 60.179 50.000 0.00 0.00 0.00 4.40
563 564 4.591202 CGGAAGCATGTTAAATACAGCAG 58.409 43.478 0.00 0.00 40.83 4.24
572 573 0.613260 AAATACAGCAGTCTCCCGCA 59.387 50.000 0.00 0.00 0.00 5.69
577 578 0.239347 CAGCAGTCTCCCGCAAAAAG 59.761 55.000 0.00 0.00 0.00 2.27
582 583 3.552890 GCAGTCTCCCGCAAAAAGAAAAT 60.553 43.478 0.00 0.00 0.00 1.82
583 584 4.620982 CAGTCTCCCGCAAAAAGAAAATT 58.379 39.130 0.00 0.00 0.00 1.82
584 585 5.049828 CAGTCTCCCGCAAAAAGAAAATTT 58.950 37.500 0.00 0.00 0.00 1.82
592 593 8.125448 TCCCGCAAAAAGAAAATTTGTTAAATG 58.875 29.630 0.00 0.00 39.42 2.32
620 621 6.350864 GCAGTGCTATGATATACTGATGGTCT 60.351 42.308 8.18 0.00 42.28 3.85
798 799 5.241728 AGAAAGCAAACAACCAATCTACTCC 59.758 40.000 0.00 0.00 0.00 3.85
820 821 6.607019 TCCCCAGTACAAATCTACACTTTTT 58.393 36.000 0.00 0.00 0.00 1.94
887 888 3.366724 GCATTTGCATCATATCCATTGCG 59.633 43.478 0.00 0.00 41.59 4.85
919 920 0.592500 ATCTCAGCGTGCGTCATACG 60.593 55.000 0.00 0.00 45.88 3.06
920 921 1.514228 CTCAGCGTGCGTCATACGT 60.514 57.895 0.00 0.00 44.73 3.57
921 922 0.247934 CTCAGCGTGCGTCATACGTA 60.248 55.000 0.00 0.00 44.73 3.57
1028 1029 6.279882 CAAGAAAGGCAGGAAACATTTACAA 58.720 36.000 0.00 0.00 0.00 2.41
1126 1127 2.622942 CTCTCCATTCTTCTCCTCCTCG 59.377 54.545 0.00 0.00 0.00 4.63
1127 1128 1.068434 CTCCATTCTTCTCCTCCTCGC 59.932 57.143 0.00 0.00 0.00 5.03
1128 1129 0.249238 CCATTCTTCTCCTCCTCGCG 60.249 60.000 0.00 0.00 0.00 5.87
1129 1130 0.249238 CATTCTTCTCCTCCTCGCGG 60.249 60.000 6.13 0.00 0.00 6.46
1130 1131 2.022240 ATTCTTCTCCTCCTCGCGGC 62.022 60.000 6.13 0.00 0.00 6.53
1365 1369 0.035820 TTAACCTCTCCGGCGCATTT 60.036 50.000 10.83 0.00 35.61 2.32
2465 2469 1.754226 GGAGGAGAAGCTCATCGTCTT 59.246 52.381 16.04 0.00 41.48 3.01
2584 2975 8.136800 TGCTATGGCATGAAACAATATGTAAAG 58.863 33.333 10.98 0.00 44.28 1.85
2587 2978 6.563422 TGGCATGAAACAATATGTAAAGAGC 58.437 36.000 0.00 0.00 0.00 4.09
2597 2988 3.503827 ATGTAAAGAGCGATGTCGTGA 57.496 42.857 4.20 0.00 42.22 4.35
2621 3012 2.827051 CGATTGTGCTCGGCCATGG 61.827 63.158 7.63 7.63 35.03 3.66
2674 3072 2.576191 TCCCTAATTTCACAGGAGTGGG 59.424 50.000 0.00 0.00 45.91 4.61
2678 3076 2.155197 ATTTCACAGGAGTGGGCCCC 62.155 60.000 22.27 11.17 45.91 5.80
2679 3077 3.810687 TTCACAGGAGTGGGCCCCT 62.811 63.158 22.27 16.57 45.91 4.79
2680 3078 3.260100 CACAGGAGTGGGCCCCTT 61.260 66.667 22.27 7.18 42.13 3.95
2689 3087 3.600981 GGGCCCCTTCCCCAAGTT 61.601 66.667 12.23 0.00 42.36 2.66
2690 3088 2.243144 GGGCCCCTTCCCCAAGTTA 61.243 63.158 12.23 0.00 42.36 2.24
2692 3090 0.106167 GGCCCCTTCCCCAAGTTATC 60.106 60.000 0.00 0.00 0.00 1.75
2694 3092 2.132686 GCCCCTTCCCCAAGTTATCTA 58.867 52.381 0.00 0.00 0.00 1.98
2695 3093 2.716969 GCCCCTTCCCCAAGTTATCTAT 59.283 50.000 0.00 0.00 0.00 1.98
2696 3094 3.914435 GCCCCTTCCCCAAGTTATCTATA 59.086 47.826 0.00 0.00 0.00 1.31
2731 3129 7.916914 AAATGTTATTTTGCGTAGGTCTAGT 57.083 32.000 0.00 0.00 0.00 2.57
2749 3147 9.349713 AGGTCTAGTATTACTCTTCAGATCTTG 57.650 37.037 0.00 0.00 0.00 3.02
2784 3182 3.896272 TGGACAGATGAGAGATGAGATGG 59.104 47.826 0.00 0.00 0.00 3.51
2792 3190 5.136068 TGAGAGATGAGATGGAGTAGGTT 57.864 43.478 0.00 0.00 0.00 3.50
2795 3193 5.523588 AGAGATGAGATGGAGTAGGTTTCA 58.476 41.667 0.00 0.00 0.00 2.69
2796 3194 5.362430 AGAGATGAGATGGAGTAGGTTTCAC 59.638 44.000 0.00 0.00 0.00 3.18
2806 3204 4.162320 GGAGTAGGTTTCACATCTGATCCA 59.838 45.833 0.00 0.00 0.00 3.41
2808 3206 4.532126 AGTAGGTTTCACATCTGATCCACA 59.468 41.667 0.00 0.00 0.00 4.17
2809 3207 3.947868 AGGTTTCACATCTGATCCACAG 58.052 45.455 0.00 0.00 46.97 3.66
2811 3209 3.076621 GTTTCACATCTGATCCACAGCA 58.923 45.455 0.00 0.00 45.38 4.41
2812 3210 3.421919 TTCACATCTGATCCACAGCAA 57.578 42.857 0.00 0.00 45.38 3.91
2815 3213 3.515104 TCACATCTGATCCACAGCAACTA 59.485 43.478 0.00 0.00 45.38 2.24
2818 3216 4.162888 ACATCTGATCCACAGCAACTATCA 59.837 41.667 0.00 0.00 45.38 2.15
2822 3220 4.201657 TGATCCACAGCAACTATCATTGG 58.798 43.478 0.00 0.00 0.00 3.16
2824 3222 4.508551 TCCACAGCAACTATCATTGGAT 57.491 40.909 0.00 0.00 37.55 3.41
2844 3242 3.662759 TCCAAACCAACCAACTCTTCT 57.337 42.857 0.00 0.00 0.00 2.85
2845 3243 3.551846 TCCAAACCAACCAACTCTTCTC 58.448 45.455 0.00 0.00 0.00 2.87
2855 3253 2.353605 CCAACTCTTCTCAGGCTCTGTC 60.354 54.545 2.68 0.00 32.61 3.51
2856 3254 2.298446 CAACTCTTCTCAGGCTCTGTCA 59.702 50.000 2.68 0.00 32.61 3.58
2857 3255 2.170166 ACTCTTCTCAGGCTCTGTCAG 58.830 52.381 0.00 0.00 32.61 3.51
2954 3352 1.834896 TGCATGGATAACCGGTACACT 59.165 47.619 8.00 0.00 39.42 3.55
2981 3381 2.532843 AGTCCGTGGGAGCTAACTTTA 58.467 47.619 0.00 0.00 29.39 1.85
2988 3388 4.127907 GTGGGAGCTAACTTTATGCCTAC 58.872 47.826 0.00 0.00 0.00 3.18
3036 3436 3.063725 CGTCAAAACCGACCACAAAGTAA 59.936 43.478 0.00 0.00 31.91 2.24
3064 3478 0.320697 GAGGTGGTGGCGTAGAAACT 59.679 55.000 0.00 0.00 0.00 2.66
3098 3512 8.791327 TGCTTGATCTGTTGATTATTTAGACA 57.209 30.769 0.00 0.00 32.19 3.41
3135 3549 8.031848 TCCGTTACACATAAATAAACCAGTTC 57.968 34.615 0.00 0.00 0.00 3.01
3186 3602 5.552178 ACAATCTGGTGAAGTTACTCCTTC 58.448 41.667 0.00 0.00 41.01 3.46
3207 3623 4.694512 TCCTTCCGGGATTATATGGATGA 58.305 43.478 0.00 0.00 39.58 2.92
3517 3942 3.523792 TCCCAGGATGCATCTCATGATA 58.476 45.455 25.28 10.61 35.05 2.15
3521 3946 4.020485 CCAGGATGCATCTCATGATACTCA 60.020 45.833 25.28 0.00 35.05 3.41
3529 3954 8.543862 TGCATCTCATGATACTCATTTGATAC 57.456 34.615 0.00 0.00 34.28 2.24
3531 3956 9.217278 GCATCTCATGATACTCATTTGATACTT 57.783 33.333 0.00 0.00 34.28 2.24
3543 5365 9.685276 ACTCATTTGATACTTTGGATGTTGATA 57.315 29.630 0.00 0.00 0.00 2.15
4083 5906 1.081641 CGACGTGTACTGCTTCGGT 60.082 57.895 0.00 0.00 0.00 4.69
4408 6231 0.664767 GAGGAGTGATACGCGATGCC 60.665 60.000 15.93 3.86 0.00 4.40
4412 6235 0.175760 AGTGATACGCGATGCCAGTT 59.824 50.000 15.93 0.00 0.00 3.16
4633 6456 9.177608 CAACAATTTATTCTAGTTGGAGGATGA 57.822 33.333 0.00 0.00 36.75 2.92
4974 6865 4.432712 AGTCAAATGTGCACCTTGTTTTC 58.567 39.130 21.56 13.62 0.00 2.29
5035 6926 3.320673 AATCAGAAGTGAAGACCCGAC 57.679 47.619 0.00 0.00 35.88 4.79
5072 6963 1.464997 GGCACTCTCAACAAACCGATC 59.535 52.381 0.00 0.00 0.00 3.69
5091 6982 4.503007 CGATCGAATTTTCACCGTGATACT 59.497 41.667 10.26 0.00 0.00 2.12
5092 6983 5.684184 CGATCGAATTTTCACCGTGATACTA 59.316 40.000 10.26 0.00 0.00 1.82
5103 6994 4.750098 CACCGTGATACTAACCATTGGATC 59.250 45.833 10.37 2.02 0.00 3.36
5126 7017 0.831307 GGTCGATTTGGTCTAGGCCT 59.169 55.000 15.92 11.78 0.00 5.19
5169 7080 4.846779 TTCAGTTGCATCCCTTTGTAAC 57.153 40.909 0.00 0.00 40.99 2.50
5184 7095 0.179029 GTAACATACATGCCCCCGCT 60.179 55.000 0.00 0.00 35.36 5.52
5187 7098 0.762842 ACATACATGCCCCCGCTAGA 60.763 55.000 0.00 0.00 35.36 2.43
5213 7124 6.643770 GCAATTTGCTCATTTCCATATAGGTG 59.356 38.462 14.11 0.00 40.96 4.00
5216 7127 9.592196 AATTTGCTCATTTCCATATAGGTGTAT 57.408 29.630 0.00 0.00 39.02 2.29
5218 7129 9.725019 TTTGCTCATTTCCATATAGGTGTATAG 57.275 33.333 0.00 0.00 39.02 1.31
5228 7139 9.201989 TCCATATAGGTGTATAGAATAAGGCAG 57.798 37.037 0.00 0.00 39.02 4.85
5235 7146 1.435256 TAGAATAAGGCAGCTCCCCC 58.565 55.000 0.00 0.00 34.51 5.40
5251 7162 1.377229 CCCGGTGAAAACCTAGCCA 59.623 57.895 0.00 0.00 0.00 4.75
5258 7169 1.351017 TGAAAACCTAGCCACCTCCTG 59.649 52.381 0.00 0.00 0.00 3.86
5287 7198 5.073311 TGTAGGTTCTCTCCTTTGATTCG 57.927 43.478 0.00 0.00 38.86 3.34
5343 7254 3.445096 CCAAACCCTTCTTATCAGCCAAG 59.555 47.826 0.00 0.00 0.00 3.61
5345 7256 2.562296 ACCCTTCTTATCAGCCAAGGA 58.438 47.619 0.00 0.00 38.15 3.36
5347 7258 3.137360 ACCCTTCTTATCAGCCAAGGATC 59.863 47.826 0.00 0.00 38.15 3.36
5355 7266 2.854963 TCAGCCAAGGATCACATATGC 58.145 47.619 1.58 0.00 0.00 3.14
5361 7272 3.242837 CCAAGGATCACATATGCACAACG 60.243 47.826 1.58 0.00 0.00 4.10
5362 7273 2.564771 AGGATCACATATGCACAACGG 58.435 47.619 1.58 0.00 0.00 4.44
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.090129 CGAACAAGAAGGAAAGTGAACAAAA 58.910 36.000 0.00 0.00 0.00 2.44
5 6 3.118186 TCCCGAACAAGAAGGAAAGTGAA 60.118 43.478 0.00 0.00 0.00 3.18
6 7 2.436542 TCCCGAACAAGAAGGAAAGTGA 59.563 45.455 0.00 0.00 0.00 3.41
7 8 2.846193 TCCCGAACAAGAAGGAAAGTG 58.154 47.619 0.00 0.00 0.00 3.16
8 9 3.570912 TTCCCGAACAAGAAGGAAAGT 57.429 42.857 0.00 0.00 35.48 2.66
9 10 3.883489 AGTTTCCCGAACAAGAAGGAAAG 59.117 43.478 3.40 0.00 46.26 2.62
10 11 3.630312 CAGTTTCCCGAACAAGAAGGAAA 59.370 43.478 0.00 0.00 44.15 3.13
11 12 3.211045 CAGTTTCCCGAACAAGAAGGAA 58.789 45.455 0.00 0.00 40.84 3.36
12 13 2.846193 CAGTTTCCCGAACAAGAAGGA 58.154 47.619 0.00 0.00 40.84 3.36
13 14 1.266989 GCAGTTTCCCGAACAAGAAGG 59.733 52.381 0.00 0.00 40.84 3.46
14 15 2.222027 AGCAGTTTCCCGAACAAGAAG 58.778 47.619 0.00 0.00 40.84 2.85
15 16 2.341846 AGCAGTTTCCCGAACAAGAA 57.658 45.000 0.00 0.00 40.84 2.52
16 17 2.341846 AAGCAGTTTCCCGAACAAGA 57.658 45.000 0.00 0.00 40.84 3.02
17 18 2.357637 TGAAAGCAGTTTCCCGAACAAG 59.642 45.455 0.00 0.00 41.37 3.16
18 19 2.370349 TGAAAGCAGTTTCCCGAACAA 58.630 42.857 0.00 0.00 41.37 2.83
19 20 2.045561 TGAAAGCAGTTTCCCGAACA 57.954 45.000 0.00 0.00 41.37 3.18
20 21 2.098443 TGTTGAAAGCAGTTTCCCGAAC 59.902 45.455 0.00 0.00 41.37 3.95
21 22 2.370349 TGTTGAAAGCAGTTTCCCGAA 58.630 42.857 0.00 0.00 41.37 4.30
22 23 2.045561 TGTTGAAAGCAGTTTCCCGA 57.954 45.000 0.00 0.00 41.37 5.14
23 24 3.502211 AGTATGTTGAAAGCAGTTTCCCG 59.498 43.478 0.00 0.00 41.37 5.14
24 25 4.798574 CAGTATGTTGAAAGCAGTTTCCC 58.201 43.478 0.00 0.00 41.37 3.97
53 54 2.092753 CCCAATGGTACTCAGCATCACT 60.093 50.000 0.00 0.00 41.99 3.41
54 55 2.292267 CCCAATGGTACTCAGCATCAC 58.708 52.381 0.00 0.00 41.99 3.06
55 56 1.408683 GCCCAATGGTACTCAGCATCA 60.409 52.381 0.00 0.00 41.99 3.07
56 57 1.133976 AGCCCAATGGTACTCAGCATC 60.134 52.381 0.00 0.00 41.99 3.91
57 58 0.921896 AGCCCAATGGTACTCAGCAT 59.078 50.000 0.00 0.00 44.69 3.79
58 59 0.253044 GAGCCCAATGGTACTCAGCA 59.747 55.000 12.91 0.00 36.41 4.41
59 60 0.253044 TGAGCCCAATGGTACTCAGC 59.747 55.000 15.61 3.35 31.82 4.26
60 61 1.278985 TGTGAGCCCAATGGTACTCAG 59.721 52.381 18.83 0.00 35.59 3.35
61 62 1.278985 CTGTGAGCCCAATGGTACTCA 59.721 52.381 15.61 15.61 33.52 3.41
62 63 1.407437 CCTGTGAGCCCAATGGTACTC 60.407 57.143 11.37 11.37 0.00 2.59
63 64 0.620556 CCTGTGAGCCCAATGGTACT 59.379 55.000 0.00 0.00 0.00 2.73
64 65 0.618458 TCCTGTGAGCCCAATGGTAC 59.382 55.000 0.00 0.00 0.00 3.34
65 66 0.911769 CTCCTGTGAGCCCAATGGTA 59.088 55.000 0.00 0.00 0.00 3.25
66 67 1.687612 CTCCTGTGAGCCCAATGGT 59.312 57.895 0.00 0.00 0.00 3.55
67 68 4.651867 CTCCTGTGAGCCCAATGG 57.348 61.111 0.00 0.00 0.00 3.16
77 78 0.035881 AGACACCACATGCTCCTGTG 59.964 55.000 0.00 7.42 44.92 3.66
78 79 1.644509 TAGACACCACATGCTCCTGT 58.355 50.000 0.00 0.00 0.00 4.00
79 80 2.558378 CATAGACACCACATGCTCCTG 58.442 52.381 0.00 0.00 0.00 3.86
80 81 1.134280 GCATAGACACCACATGCTCCT 60.134 52.381 0.00 0.00 41.44 3.69
81 82 1.303309 GCATAGACACCACATGCTCC 58.697 55.000 0.00 0.00 41.44 4.70
82 83 2.028420 TGCATAGACACCACATGCTC 57.972 50.000 7.24 0.00 44.27 4.26
83 84 2.723322 ATGCATAGACACCACATGCT 57.277 45.000 0.00 0.00 44.27 3.79
84 85 2.684374 TGAATGCATAGACACCACATGC 59.316 45.455 0.00 0.00 44.23 4.06
85 86 4.337274 ACATGAATGCATAGACACCACATG 59.663 41.667 0.00 8.59 38.59 3.21
86 87 4.337274 CACATGAATGCATAGACACCACAT 59.663 41.667 0.00 0.00 32.27 3.21
87 88 3.690628 CACATGAATGCATAGACACCACA 59.309 43.478 0.00 0.00 32.27 4.17
88 89 3.488047 GCACATGAATGCATAGACACCAC 60.488 47.826 0.00 0.00 45.39 4.16
89 90 2.684374 GCACATGAATGCATAGACACCA 59.316 45.455 0.00 0.00 45.39 4.17
90 91 3.344904 GCACATGAATGCATAGACACC 57.655 47.619 0.00 0.00 45.39 4.16
99 100 4.491676 AGAACAATGAAGCACATGAATGC 58.508 39.130 0.00 0.00 46.50 3.56
100 101 6.308041 CAGAAGAACAATGAAGCACATGAATG 59.692 38.462 0.00 0.00 39.39 2.67
101 102 6.015688 ACAGAAGAACAATGAAGCACATGAAT 60.016 34.615 0.00 0.00 39.39 2.57
102 103 5.300034 ACAGAAGAACAATGAAGCACATGAA 59.700 36.000 0.00 0.00 39.39 2.57
103 104 4.823442 ACAGAAGAACAATGAAGCACATGA 59.177 37.500 0.00 0.00 39.39 3.07
104 105 5.117355 ACAGAAGAACAATGAAGCACATG 57.883 39.130 0.00 0.00 39.39 3.21
105 106 5.561532 CGAACAGAAGAACAATGAAGCACAT 60.562 40.000 0.00 0.00 41.45 3.21
106 107 4.260743 CGAACAGAAGAACAATGAAGCACA 60.261 41.667 0.00 0.00 0.00 4.57
107 108 4.214437 CGAACAGAAGAACAATGAAGCAC 58.786 43.478 0.00 0.00 0.00 4.40
108 109 3.876914 ACGAACAGAAGAACAATGAAGCA 59.123 39.130 0.00 0.00 0.00 3.91
109 110 4.212214 AGACGAACAGAAGAACAATGAAGC 59.788 41.667 0.00 0.00 0.00 3.86
110 111 5.914085 AGACGAACAGAAGAACAATGAAG 57.086 39.130 0.00 0.00 0.00 3.02
111 112 6.513180 AGTAGACGAACAGAAGAACAATGAA 58.487 36.000 0.00 0.00 0.00 2.57
112 113 6.085555 AGTAGACGAACAGAAGAACAATGA 57.914 37.500 0.00 0.00 0.00 2.57
113 114 6.771188 AAGTAGACGAACAGAAGAACAATG 57.229 37.500 0.00 0.00 0.00 2.82
114 115 8.358148 TCTTAAGTAGACGAACAGAAGAACAAT 58.642 33.333 1.63 0.00 0.00 2.71
115 116 7.709947 TCTTAAGTAGACGAACAGAAGAACAA 58.290 34.615 1.63 0.00 0.00 2.83
116 117 7.013083 ACTCTTAAGTAGACGAACAGAAGAACA 59.987 37.037 1.63 0.00 32.59 3.18
117 118 7.324135 CACTCTTAAGTAGACGAACAGAAGAAC 59.676 40.741 1.63 0.00 33.25 3.01
118 119 7.361127 CACTCTTAAGTAGACGAACAGAAGAA 58.639 38.462 1.63 0.00 33.25 2.52
119 120 6.568081 GCACTCTTAAGTAGACGAACAGAAGA 60.568 42.308 1.63 0.00 33.25 2.87
120 121 5.569823 GCACTCTTAAGTAGACGAACAGAAG 59.430 44.000 1.63 0.00 33.25 2.85
121 122 5.458891 GCACTCTTAAGTAGACGAACAGAA 58.541 41.667 1.63 0.00 33.25 3.02
122 123 4.082895 GGCACTCTTAAGTAGACGAACAGA 60.083 45.833 1.63 0.00 33.25 3.41
123 124 4.167268 GGCACTCTTAAGTAGACGAACAG 58.833 47.826 1.63 0.00 33.25 3.16
124 125 3.365666 CGGCACTCTTAAGTAGACGAACA 60.366 47.826 12.29 0.00 37.28 3.18
125 126 3.169733 CGGCACTCTTAAGTAGACGAAC 58.830 50.000 12.29 0.00 37.28 3.95
126 127 2.163010 CCGGCACTCTTAAGTAGACGAA 59.837 50.000 17.13 0.00 37.28 3.85
127 128 1.741706 CCGGCACTCTTAAGTAGACGA 59.258 52.381 17.13 0.00 37.28 4.20
128 129 1.741706 TCCGGCACTCTTAAGTAGACG 59.258 52.381 0.00 7.50 35.87 4.18
129 130 3.015327 TCTCCGGCACTCTTAAGTAGAC 58.985 50.000 0.00 0.00 33.25 2.59
130 131 3.015327 GTCTCCGGCACTCTTAAGTAGA 58.985 50.000 0.00 0.00 33.25 2.59
131 132 2.223294 CGTCTCCGGCACTCTTAAGTAG 60.223 54.545 0.00 1.70 33.25 2.57
132 133 1.741706 CGTCTCCGGCACTCTTAAGTA 59.258 52.381 0.00 0.00 33.25 2.24
133 134 0.526662 CGTCTCCGGCACTCTTAAGT 59.473 55.000 0.00 0.00 35.60 2.24
134 135 0.809385 TCGTCTCCGGCACTCTTAAG 59.191 55.000 0.00 0.00 33.95 1.85
135 136 1.250328 TTCGTCTCCGGCACTCTTAA 58.750 50.000 0.00 0.00 33.95 1.85
136 137 1.201647 CTTTCGTCTCCGGCACTCTTA 59.798 52.381 0.00 0.00 33.95 2.10
137 138 0.038159 CTTTCGTCTCCGGCACTCTT 60.038 55.000 0.00 0.00 33.95 2.85
138 139 1.587054 CTTTCGTCTCCGGCACTCT 59.413 57.895 0.00 0.00 33.95 3.24
139 140 1.446272 CCTTTCGTCTCCGGCACTC 60.446 63.158 0.00 0.00 33.95 3.51
140 141 2.156051 GACCTTTCGTCTCCGGCACT 62.156 60.000 0.00 0.00 38.57 4.40
141 142 1.737008 GACCTTTCGTCTCCGGCAC 60.737 63.158 0.00 0.00 38.57 5.01
142 143 2.654877 GACCTTTCGTCTCCGGCA 59.345 61.111 0.00 0.00 38.57 5.69
156 157 0.915364 ATGAGCTCCAAGGGAAGACC 59.085 55.000 12.15 0.00 40.67 3.85
157 158 1.472376 CGATGAGCTCCAAGGGAAGAC 60.472 57.143 12.15 0.00 0.00 3.01
158 159 0.826715 CGATGAGCTCCAAGGGAAGA 59.173 55.000 12.15 0.00 0.00 2.87
159 160 0.813210 GCGATGAGCTCCAAGGGAAG 60.813 60.000 12.15 0.00 44.04 3.46
160 161 1.221840 GCGATGAGCTCCAAGGGAA 59.778 57.895 12.15 0.00 44.04 3.97
161 162 2.903357 GCGATGAGCTCCAAGGGA 59.097 61.111 12.15 0.00 44.04 4.20
171 172 2.498807 TTGAAGATCTCGGCGATGAG 57.501 50.000 11.27 0.00 37.33 2.90
172 173 2.959507 TTTGAAGATCTCGGCGATGA 57.040 45.000 11.27 10.83 30.84 2.92
173 174 4.542662 AATTTTGAAGATCTCGGCGATG 57.457 40.909 11.27 4.92 30.84 3.84
174 175 4.635765 TGAAATTTTGAAGATCTCGGCGAT 59.364 37.500 11.27 0.00 34.25 4.58
175 176 4.000325 TGAAATTTTGAAGATCTCGGCGA 59.000 39.130 10.14 10.14 0.00 5.54
176 177 4.340894 TGAAATTTTGAAGATCTCGGCG 57.659 40.909 0.00 0.00 0.00 6.46
177 178 5.098211 CCTTGAAATTTTGAAGATCTCGGC 58.902 41.667 9.56 0.00 0.00 5.54
178 179 6.500684 TCCTTGAAATTTTGAAGATCTCGG 57.499 37.500 9.56 0.00 0.00 4.63
179 180 7.025963 CCTTCCTTGAAATTTTGAAGATCTCG 58.974 38.462 9.56 0.00 35.56 4.04
180 181 8.115490 TCCTTCCTTGAAATTTTGAAGATCTC 57.885 34.615 9.56 0.00 35.56 2.75
181 182 8.482852 TTCCTTCCTTGAAATTTTGAAGATCT 57.517 30.769 9.56 0.00 35.56 2.75
182 183 9.148104 CATTCCTTCCTTGAAATTTTGAAGATC 57.852 33.333 9.56 0.00 35.56 2.75
183 184 8.654094 ACATTCCTTCCTTGAAATTTTGAAGAT 58.346 29.630 9.56 6.05 35.56 2.40
184 185 8.021898 ACATTCCTTCCTTGAAATTTTGAAGA 57.978 30.769 9.56 1.78 35.56 2.87
185 186 8.146412 AGACATTCCTTCCTTGAAATTTTGAAG 58.854 33.333 1.79 1.79 33.80 3.02
186 187 8.021898 AGACATTCCTTCCTTGAAATTTTGAA 57.978 30.769 0.00 0.00 0.00 2.69
187 188 7.601705 AGACATTCCTTCCTTGAAATTTTGA 57.398 32.000 0.00 0.00 0.00 2.69
191 192 8.893727 CGTTATAGACATTCCTTCCTTGAAATT 58.106 33.333 0.00 0.00 0.00 1.82
192 193 7.499232 CCGTTATAGACATTCCTTCCTTGAAAT 59.501 37.037 0.00 0.00 0.00 2.17
193 194 6.821665 CCGTTATAGACATTCCTTCCTTGAAA 59.178 38.462 0.00 0.00 0.00 2.69
194 195 6.155565 TCCGTTATAGACATTCCTTCCTTGAA 59.844 38.462 0.00 0.00 0.00 2.69
195 196 5.659525 TCCGTTATAGACATTCCTTCCTTGA 59.340 40.000 0.00 0.00 0.00 3.02
196 197 5.914033 TCCGTTATAGACATTCCTTCCTTG 58.086 41.667 0.00 0.00 0.00 3.61
197 198 6.555463 TTCCGTTATAGACATTCCTTCCTT 57.445 37.500 0.00 0.00 0.00 3.36
198 199 6.070424 TGTTTCCGTTATAGACATTCCTTCCT 60.070 38.462 0.00 0.00 0.00 3.36
199 200 6.036844 GTGTTTCCGTTATAGACATTCCTTCC 59.963 42.308 0.00 0.00 0.00 3.46
200 201 6.592607 TGTGTTTCCGTTATAGACATTCCTTC 59.407 38.462 0.00 0.00 0.00 3.46
201 202 6.469410 TGTGTTTCCGTTATAGACATTCCTT 58.531 36.000 0.00 0.00 0.00 3.36
202 203 6.045072 TGTGTTTCCGTTATAGACATTCCT 57.955 37.500 0.00 0.00 0.00 3.36
203 204 6.730960 TTGTGTTTCCGTTATAGACATTCC 57.269 37.500 0.00 0.00 0.00 3.01
204 205 7.748847 ACATTGTGTTTCCGTTATAGACATTC 58.251 34.615 0.00 0.00 0.00 2.67
205 206 7.681939 ACATTGTGTTTCCGTTATAGACATT 57.318 32.000 0.00 0.00 0.00 2.71
206 207 7.389330 TGAACATTGTGTTTCCGTTATAGACAT 59.611 33.333 0.00 0.00 41.28 3.06
207 208 6.706716 TGAACATTGTGTTTCCGTTATAGACA 59.293 34.615 0.00 0.00 41.28 3.41
208 209 7.124347 TGAACATTGTGTTTCCGTTATAGAC 57.876 36.000 0.00 0.00 41.28 2.59
209 210 6.370442 CCTGAACATTGTGTTTCCGTTATAGA 59.630 38.462 0.00 0.00 41.28 1.98
210 211 6.403200 CCCTGAACATTGTGTTTCCGTTATAG 60.403 42.308 0.00 0.00 41.28 1.31
211 212 5.413213 CCCTGAACATTGTGTTTCCGTTATA 59.587 40.000 0.00 0.00 41.28 0.98
212 213 4.217550 CCCTGAACATTGTGTTTCCGTTAT 59.782 41.667 0.00 0.00 41.28 1.89
213 214 3.566322 CCCTGAACATTGTGTTTCCGTTA 59.434 43.478 0.00 0.00 41.28 3.18
214 215 2.360801 CCCTGAACATTGTGTTTCCGTT 59.639 45.455 0.00 0.00 41.28 4.44
215 216 1.953686 CCCTGAACATTGTGTTTCCGT 59.046 47.619 0.00 0.00 41.28 4.69
216 217 1.335872 GCCCTGAACATTGTGTTTCCG 60.336 52.381 0.00 0.00 41.28 4.30
217 218 1.963515 AGCCCTGAACATTGTGTTTCC 59.036 47.619 0.00 0.00 41.28 3.13
218 219 2.622942 TCAGCCCTGAACATTGTGTTTC 59.377 45.455 0.00 0.00 41.28 2.78
219 220 2.665165 TCAGCCCTGAACATTGTGTTT 58.335 42.857 0.00 0.00 41.28 2.83
220 221 2.363306 TCAGCCCTGAACATTGTGTT 57.637 45.000 0.00 0.00 44.37 3.32
221 222 2.233271 CTTCAGCCCTGAACATTGTGT 58.767 47.619 6.62 0.00 43.90 3.72
222 223 1.542915 CCTTCAGCCCTGAACATTGTG 59.457 52.381 6.62 0.00 43.90 3.33
223 224 1.915141 CCTTCAGCCCTGAACATTGT 58.085 50.000 6.62 0.00 43.90 2.71
224 225 0.529378 GCCTTCAGCCCTGAACATTG 59.471 55.000 6.62 0.00 43.90 2.82
225 226 0.112995 TGCCTTCAGCCCTGAACATT 59.887 50.000 6.62 0.00 43.90 2.71
226 227 0.112995 TTGCCTTCAGCCCTGAACAT 59.887 50.000 6.62 0.00 43.90 2.71
227 228 0.823356 GTTGCCTTCAGCCCTGAACA 60.823 55.000 6.62 2.51 43.90 3.18
228 229 0.823356 TGTTGCCTTCAGCCCTGAAC 60.823 55.000 6.62 0.02 43.90 3.18
229 230 0.823356 GTGTTGCCTTCAGCCCTGAA 60.823 55.000 10.07 10.07 46.27 3.02
230 231 1.228245 GTGTTGCCTTCAGCCCTGA 60.228 57.895 0.00 0.00 42.71 3.86
231 232 1.108727 TTGTGTTGCCTTCAGCCCTG 61.109 55.000 0.00 0.00 42.71 4.45
232 233 0.825010 CTTGTGTTGCCTTCAGCCCT 60.825 55.000 0.00 0.00 42.71 5.19
233 234 1.662044 CTTGTGTTGCCTTCAGCCC 59.338 57.895 0.00 0.00 42.71 5.19
234 235 1.006922 GCTTGTGTTGCCTTCAGCC 60.007 57.895 0.00 0.00 42.71 4.85
235 236 0.318445 CAGCTTGTGTTGCCTTCAGC 60.318 55.000 0.00 0.00 44.14 4.26
236 237 1.266175 CTCAGCTTGTGTTGCCTTCAG 59.734 52.381 0.00 0.00 0.00 3.02
237 238 1.311859 CTCAGCTTGTGTTGCCTTCA 58.688 50.000 0.00 0.00 0.00 3.02
238 239 1.002033 CACTCAGCTTGTGTTGCCTTC 60.002 52.381 8.11 0.00 0.00 3.46
239 240 1.027357 CACTCAGCTTGTGTTGCCTT 58.973 50.000 8.11 0.00 0.00 4.35
240 241 1.450531 GCACTCAGCTTGTGTTGCCT 61.451 55.000 15.44 0.00 41.15 4.75
241 242 1.008079 GCACTCAGCTTGTGTTGCC 60.008 57.895 15.44 0.00 41.15 4.52
242 243 4.622364 GCACTCAGCTTGTGTTGC 57.378 55.556 15.44 3.30 41.15 4.17
251 252 0.447011 GCAGACATTGAGCACTCAGC 59.553 55.000 0.00 0.00 41.13 4.26
252 253 2.096220 AGCAGACATTGAGCACTCAG 57.904 50.000 0.00 0.00 41.13 3.35
253 254 2.148768 CAAGCAGACATTGAGCACTCA 58.851 47.619 0.00 0.00 37.91 3.41
254 255 1.135746 GCAAGCAGACATTGAGCACTC 60.136 52.381 0.00 0.00 0.00 3.51
255 256 0.879765 GCAAGCAGACATTGAGCACT 59.120 50.000 0.00 0.00 0.00 4.40
256 257 0.879765 AGCAAGCAGACATTGAGCAC 59.120 50.000 0.00 0.00 0.00 4.40
257 258 1.162698 GAGCAAGCAGACATTGAGCA 58.837 50.000 0.00 0.00 0.00 4.26
258 259 1.451067 AGAGCAAGCAGACATTGAGC 58.549 50.000 0.00 0.00 0.00 4.26
259 260 6.482641 ACATATTAGAGCAAGCAGACATTGAG 59.517 38.462 0.00 0.00 0.00 3.02
260 261 6.259387 CACATATTAGAGCAAGCAGACATTGA 59.741 38.462 0.00 0.00 0.00 2.57
261 262 6.037940 ACACATATTAGAGCAAGCAGACATTG 59.962 38.462 0.00 0.00 0.00 2.82
262 263 6.118170 ACACATATTAGAGCAAGCAGACATT 58.882 36.000 0.00 0.00 0.00 2.71
263 264 5.678583 ACACATATTAGAGCAAGCAGACAT 58.321 37.500 0.00 0.00 0.00 3.06
264 265 5.089970 ACACATATTAGAGCAAGCAGACA 57.910 39.130 0.00 0.00 0.00 3.41
265 266 4.509600 GGACACATATTAGAGCAAGCAGAC 59.490 45.833 0.00 0.00 0.00 3.51
266 267 4.162131 TGGACACATATTAGAGCAAGCAGA 59.838 41.667 0.00 0.00 0.00 4.26
267 268 4.445453 TGGACACATATTAGAGCAAGCAG 58.555 43.478 0.00 0.00 0.00 4.24
268 269 4.486125 TGGACACATATTAGAGCAAGCA 57.514 40.909 0.00 0.00 0.00 3.91
269 270 6.875726 TCATATGGACACATATTAGAGCAAGC 59.124 38.462 2.13 0.00 45.67 4.01
281 282 8.929260 ACATTTGTCATATCATATGGACACAT 57.071 30.769 10.83 8.25 39.75 3.21
282 283 9.492973 CTACATTTGTCATATCATATGGACACA 57.507 33.333 10.83 6.59 39.75 3.72
283 284 8.446273 GCTACATTTGTCATATCATATGGACAC 58.554 37.037 10.83 0.00 39.75 3.67
284 285 8.377799 AGCTACATTTGTCATATCATATGGACA 58.622 33.333 4.76 5.70 38.41 4.02
285 286 8.783833 AGCTACATTTGTCATATCATATGGAC 57.216 34.615 4.76 3.02 33.38 4.02
286 287 9.797642 AAAGCTACATTTGTCATATCATATGGA 57.202 29.630 4.76 0.00 33.38 3.41
287 288 9.836076 CAAAGCTACATTTGTCATATCATATGG 57.164 33.333 4.76 0.00 35.80 2.74
300 301 6.312426 TCCAACAACAAACAAAGCTACATTTG 59.688 34.615 12.53 12.53 44.14 2.32
301 302 6.402222 TCCAACAACAAACAAAGCTACATTT 58.598 32.000 0.00 0.00 0.00 2.32
302 303 5.971763 TCCAACAACAAACAAAGCTACATT 58.028 33.333 0.00 0.00 0.00 2.71
303 304 5.590530 TCCAACAACAAACAAAGCTACAT 57.409 34.783 0.00 0.00 0.00 2.29
304 305 5.590530 ATCCAACAACAAACAAAGCTACA 57.409 34.783 0.00 0.00 0.00 2.74
305 306 5.810074 ACAATCCAACAACAAACAAAGCTAC 59.190 36.000 0.00 0.00 0.00 3.58
306 307 5.971763 ACAATCCAACAACAAACAAAGCTA 58.028 33.333 0.00 0.00 0.00 3.32
307 308 4.831107 ACAATCCAACAACAAACAAAGCT 58.169 34.783 0.00 0.00 0.00 3.74
308 309 5.544136 AACAATCCAACAACAAACAAAGC 57.456 34.783 0.00 0.00 0.00 3.51
309 310 6.735957 CGAAAACAATCCAACAACAAACAAAG 59.264 34.615 0.00 0.00 0.00 2.77
310 311 6.202954 ACGAAAACAATCCAACAACAAACAAA 59.797 30.769 0.00 0.00 0.00 2.83
311 312 5.696724 ACGAAAACAATCCAACAACAAACAA 59.303 32.000 0.00 0.00 0.00 2.83
312 313 5.119279 CACGAAAACAATCCAACAACAAACA 59.881 36.000 0.00 0.00 0.00 2.83
313 314 5.119434 ACACGAAAACAATCCAACAACAAAC 59.881 36.000 0.00 0.00 0.00 2.93
314 315 5.230942 ACACGAAAACAATCCAACAACAAA 58.769 33.333 0.00 0.00 0.00 2.83
315 316 4.810790 ACACGAAAACAATCCAACAACAA 58.189 34.783 0.00 0.00 0.00 2.83
316 317 4.442375 ACACGAAAACAATCCAACAACA 57.558 36.364 0.00 0.00 0.00 3.33
317 318 6.031471 ACTAACACGAAAACAATCCAACAAC 58.969 36.000 0.00 0.00 0.00 3.32
318 319 6.197364 ACTAACACGAAAACAATCCAACAA 57.803 33.333 0.00 0.00 0.00 2.83
319 320 5.821516 ACTAACACGAAAACAATCCAACA 57.178 34.783 0.00 0.00 0.00 3.33
320 321 7.632721 TCTAACTAACACGAAAACAATCCAAC 58.367 34.615 0.00 0.00 0.00 3.77
321 322 7.789273 TCTAACTAACACGAAAACAATCCAA 57.211 32.000 0.00 0.00 0.00 3.53
322 323 7.789273 TTCTAACTAACACGAAAACAATCCA 57.211 32.000 0.00 0.00 0.00 3.41
323 324 8.553696 TCTTTCTAACTAACACGAAAACAATCC 58.446 33.333 0.00 0.00 0.00 3.01
324 325 9.925268 TTCTTTCTAACTAACACGAAAACAATC 57.075 29.630 0.00 0.00 0.00 2.67
326 327 9.710979 CATTCTTTCTAACTAACACGAAAACAA 57.289 29.630 0.00 0.00 0.00 2.83
327 328 9.100554 TCATTCTTTCTAACTAACACGAAAACA 57.899 29.630 0.00 0.00 0.00 2.83
330 331 8.717821 CCATCATTCTTTCTAACTAACACGAAA 58.282 33.333 0.00 0.00 0.00 3.46
331 332 7.876068 ACCATCATTCTTTCTAACTAACACGAA 59.124 33.333 0.00 0.00 0.00 3.85
332 333 7.383687 ACCATCATTCTTTCTAACTAACACGA 58.616 34.615 0.00 0.00 0.00 4.35
333 334 7.596749 ACCATCATTCTTTCTAACTAACACG 57.403 36.000 0.00 0.00 0.00 4.49
334 335 9.654663 ACTACCATCATTCTTTCTAACTAACAC 57.345 33.333 0.00 0.00 0.00 3.32
335 336 9.653287 CACTACCATCATTCTTTCTAACTAACA 57.347 33.333 0.00 0.00 0.00 2.41
336 337 8.604890 GCACTACCATCATTCTTTCTAACTAAC 58.395 37.037 0.00 0.00 0.00 2.34
337 338 8.318412 TGCACTACCATCATTCTTTCTAACTAA 58.682 33.333 0.00 0.00 0.00 2.24
338 339 7.847096 TGCACTACCATCATTCTTTCTAACTA 58.153 34.615 0.00 0.00 0.00 2.24
339 340 6.711277 TGCACTACCATCATTCTTTCTAACT 58.289 36.000 0.00 0.00 0.00 2.24
340 341 6.985188 TGCACTACCATCATTCTTTCTAAC 57.015 37.500 0.00 0.00 0.00 2.34
341 342 7.568349 AGATGCACTACCATCATTCTTTCTAA 58.432 34.615 0.00 0.00 43.15 2.10
342 343 7.129457 AGATGCACTACCATCATTCTTTCTA 57.871 36.000 0.00 0.00 43.15 2.10
343 344 5.999044 AGATGCACTACCATCATTCTTTCT 58.001 37.500 0.00 0.00 43.15 2.52
344 345 6.989169 ACTAGATGCACTACCATCATTCTTTC 59.011 38.462 0.00 0.00 43.15 2.62
345 346 6.765036 CACTAGATGCACTACCATCATTCTTT 59.235 38.462 0.00 0.00 43.15 2.52
346 347 6.286758 CACTAGATGCACTACCATCATTCTT 58.713 40.000 0.00 0.00 43.15 2.52
347 348 5.221601 CCACTAGATGCACTACCATCATTCT 60.222 44.000 0.00 0.00 43.15 2.40
348 349 4.993584 CCACTAGATGCACTACCATCATTC 59.006 45.833 0.00 0.00 43.15 2.67
349 350 4.410228 ACCACTAGATGCACTACCATCATT 59.590 41.667 0.00 0.00 43.15 2.57
350 351 3.969976 ACCACTAGATGCACTACCATCAT 59.030 43.478 0.00 0.00 43.15 2.45
351 352 3.374764 ACCACTAGATGCACTACCATCA 58.625 45.455 0.00 0.00 43.15 3.07
352 353 3.639094 AGACCACTAGATGCACTACCATC 59.361 47.826 0.00 0.00 41.47 3.51
353 354 3.647636 AGACCACTAGATGCACTACCAT 58.352 45.455 0.00 0.00 0.00 3.55
354 355 3.101643 AGACCACTAGATGCACTACCA 57.898 47.619 0.00 0.00 0.00 3.25
355 356 5.074115 AGATAGACCACTAGATGCACTACC 58.926 45.833 0.00 0.00 31.78 3.18
356 357 6.938030 AGTAGATAGACCACTAGATGCACTAC 59.062 42.308 0.00 0.00 31.78 2.73
357 358 7.080653 AGTAGATAGACCACTAGATGCACTA 57.919 40.000 0.00 0.00 31.78 2.74
358 359 5.947663 AGTAGATAGACCACTAGATGCACT 58.052 41.667 0.00 0.00 31.78 4.40
359 360 6.263392 TGAAGTAGATAGACCACTAGATGCAC 59.737 42.308 0.00 0.00 31.78 4.57
360 361 6.365520 TGAAGTAGATAGACCACTAGATGCA 58.634 40.000 0.00 0.00 31.78 3.96
361 362 6.488683 ACTGAAGTAGATAGACCACTAGATGC 59.511 42.308 0.00 0.00 31.78 3.91
362 363 8.349245 CAACTGAAGTAGATAGACCACTAGATG 58.651 40.741 0.00 0.00 31.78 2.90
363 364 8.056400 ACAACTGAAGTAGATAGACCACTAGAT 58.944 37.037 0.00 0.00 31.78 1.98
364 365 7.403671 ACAACTGAAGTAGATAGACCACTAGA 58.596 38.462 0.00 0.00 31.78 2.43
365 366 7.633193 ACAACTGAAGTAGATAGACCACTAG 57.367 40.000 0.00 0.00 31.78 2.57
366 367 8.546322 TCTACAACTGAAGTAGATAGACCACTA 58.454 37.037 8.95 0.00 42.09 2.74
367 368 7.403671 TCTACAACTGAAGTAGATAGACCACT 58.596 38.462 8.95 0.00 42.09 4.00
368 369 7.553402 TCTCTACAACTGAAGTAGATAGACCAC 59.447 40.741 11.99 0.00 44.86 4.16
369 370 7.631007 TCTCTACAACTGAAGTAGATAGACCA 58.369 38.462 11.99 0.00 44.86 4.02
370 371 8.685838 ATCTCTACAACTGAAGTAGATAGACC 57.314 38.462 11.99 0.00 44.86 3.85
374 375 9.058174 GCTGTATCTCTACAACTGAAGTAGATA 57.942 37.037 11.99 7.63 44.86 1.98
375 376 7.558081 TGCTGTATCTCTACAACTGAAGTAGAT 59.442 37.037 11.99 0.00 44.86 1.98
376 377 6.884836 TGCTGTATCTCTACAACTGAAGTAGA 59.115 38.462 11.37 11.37 44.07 2.59
377 378 7.089770 TGCTGTATCTCTACAACTGAAGTAG 57.910 40.000 0.00 0.00 37.41 2.57
378 379 7.393515 TCTTGCTGTATCTCTACAACTGAAGTA 59.606 37.037 0.00 0.00 37.41 2.24
379 380 5.984695 TGCTGTATCTCTACAACTGAAGT 57.015 39.130 0.00 0.00 37.41 3.01
380 381 6.625362 TCTTGCTGTATCTCTACAACTGAAG 58.375 40.000 0.00 0.00 37.41 3.02
381 382 6.590234 TCTTGCTGTATCTCTACAACTGAA 57.410 37.500 0.00 0.00 37.41 3.02
382 383 6.590234 TTCTTGCTGTATCTCTACAACTGA 57.410 37.500 0.00 0.00 37.41 3.41
383 384 7.658179 TTTTCTTGCTGTATCTCTACAACTG 57.342 36.000 0.00 0.00 37.41 3.16
384 385 8.854614 AATTTTCTTGCTGTATCTCTACAACT 57.145 30.769 0.00 0.00 37.41 3.16
385 386 9.548208 GAAATTTTCTTGCTGTATCTCTACAAC 57.452 33.333 1.79 0.00 37.41 3.32
386 387 9.283768 TGAAATTTTCTTGCTGTATCTCTACAA 57.716 29.630 10.33 0.00 37.41 2.41
387 388 8.721478 GTGAAATTTTCTTGCTGTATCTCTACA 58.279 33.333 10.33 0.00 36.44 2.74
388 389 8.178313 GGTGAAATTTTCTTGCTGTATCTCTAC 58.822 37.037 10.33 0.00 0.00 2.59
389 390 8.103305 AGGTGAAATTTTCTTGCTGTATCTCTA 58.897 33.333 10.33 0.00 0.00 2.43
390 391 6.944862 AGGTGAAATTTTCTTGCTGTATCTCT 59.055 34.615 10.33 0.00 0.00 3.10
391 392 7.094634 TGAGGTGAAATTTTCTTGCTGTATCTC 60.095 37.037 10.33 4.26 0.00 2.75
392 393 6.716628 TGAGGTGAAATTTTCTTGCTGTATCT 59.283 34.615 10.33 0.00 0.00 1.98
393 394 6.913170 TGAGGTGAAATTTTCTTGCTGTATC 58.087 36.000 10.33 0.00 0.00 2.24
394 395 6.899393 TGAGGTGAAATTTTCTTGCTGTAT 57.101 33.333 10.33 0.00 0.00 2.29
395 396 6.489700 TCATGAGGTGAAATTTTCTTGCTGTA 59.510 34.615 10.33 0.00 32.78 2.74
396 397 5.302568 TCATGAGGTGAAATTTTCTTGCTGT 59.697 36.000 10.33 0.00 32.78 4.40
397 398 5.775686 TCATGAGGTGAAATTTTCTTGCTG 58.224 37.500 10.33 2.03 32.78 4.41
398 399 6.600882 ATCATGAGGTGAAATTTTCTTGCT 57.399 33.333 10.33 0.00 40.97 3.91
399 400 7.095270 AGAATCATGAGGTGAAATTTTCTTGC 58.905 34.615 10.33 1.64 40.97 4.01
400 401 9.136952 GAAGAATCATGAGGTGAAATTTTCTTG 57.863 33.333 16.03 0.00 40.17 3.02
401 402 8.309656 GGAAGAATCATGAGGTGAAATTTTCTT 58.690 33.333 12.59 12.59 41.58 2.52
402 403 7.452501 TGGAAGAATCATGAGGTGAAATTTTCT 59.547 33.333 10.33 0.00 40.97 2.52
403 404 7.543520 GTGGAAGAATCATGAGGTGAAATTTTC 59.456 37.037 0.09 2.05 40.97 2.29
404 405 7.015487 TGTGGAAGAATCATGAGGTGAAATTTT 59.985 33.333 0.09 0.00 40.97 1.82
405 406 6.494491 TGTGGAAGAATCATGAGGTGAAATTT 59.506 34.615 0.09 0.00 40.97 1.82
406 407 6.012113 TGTGGAAGAATCATGAGGTGAAATT 58.988 36.000 0.09 0.00 40.97 1.82
407 408 5.573219 TGTGGAAGAATCATGAGGTGAAAT 58.427 37.500 0.09 0.00 40.97 2.17
408 409 4.984295 TGTGGAAGAATCATGAGGTGAAA 58.016 39.130 0.09 0.00 40.97 2.69
409 410 4.639078 TGTGGAAGAATCATGAGGTGAA 57.361 40.909 0.09 0.00 40.97 3.18
410 411 4.639078 TTGTGGAAGAATCATGAGGTGA 57.361 40.909 0.09 0.00 42.06 4.02
411 412 5.710513 TTTTGTGGAAGAATCATGAGGTG 57.289 39.130 0.09 0.00 0.00 4.00
417 418 6.761312 TGCTTCATTTTTGTGGAAGAATCAT 58.239 32.000 4.91 0.00 40.28 2.45
485 486 3.189287 AGCAGCCATCTTACTGTTTTTCG 59.811 43.478 0.00 0.00 36.26 3.46
517 518 0.031449 GACGAGTATGAGGCTCCAGC 59.969 60.000 12.86 1.56 41.14 4.85
519 520 2.025155 GAAGACGAGTATGAGGCTCCA 58.975 52.381 12.86 0.18 0.00 3.86
563 564 4.808895 ACAAATTTTCTTTTTGCGGGAGAC 59.191 37.500 0.00 0.00 37.54 3.36
572 573 9.505995 CTGCTGCATTTAACAAATTTTCTTTTT 57.494 25.926 1.31 0.00 0.00 1.94
577 578 5.847515 GCACTGCTGCATTTAACAAATTTTC 59.152 36.000 1.31 0.00 43.62 2.29
582 583 3.731652 AGCACTGCTGCATTTAACAAA 57.268 38.095 1.31 0.00 46.97 2.83
583 584 4.458642 TCATAGCACTGCTGCATTTAACAA 59.541 37.500 14.15 0.00 46.97 2.83
584 585 4.009002 TCATAGCACTGCTGCATTTAACA 58.991 39.130 14.15 0.00 46.97 2.41
592 593 4.814147 TCAGTATATCATAGCACTGCTGC 58.186 43.478 14.15 0.00 44.63 5.25
620 621 1.401552 GTGCAGTGTGCTCTGAAACAA 59.598 47.619 5.56 0.00 45.31 2.83
820 821 7.902087 TCTTCCACAAAAGAAAAGAAAAGGAA 58.098 30.769 0.00 0.00 32.42 3.36
821 822 7.475137 TCTTCCACAAAAGAAAAGAAAAGGA 57.525 32.000 0.00 0.00 32.42 3.36
822 823 8.722480 ATTCTTCCACAAAAGAAAAGAAAAGG 57.278 30.769 3.45 0.00 45.62 3.11
887 888 2.673368 CGCTGAGATAACAAACAGGTCC 59.327 50.000 0.00 0.00 0.00 4.46
919 920 8.782339 TTTGGAGCCTAAAAATAGTACTGTAC 57.218 34.615 9.93 9.93 0.00 2.90
920 921 9.223099 GTTTTGGAGCCTAAAAATAGTACTGTA 57.777 33.333 5.39 0.00 0.00 2.74
921 922 7.942894 AGTTTTGGAGCCTAAAAATAGTACTGT 59.057 33.333 5.39 0.00 0.00 3.55
922 923 8.237267 CAGTTTTGGAGCCTAAAAATAGTACTG 58.763 37.037 5.39 0.00 0.00 2.74
923 924 7.094334 GCAGTTTTGGAGCCTAAAAATAGTACT 60.094 37.037 0.00 0.00 0.00 2.73
1028 1029 3.910627 TCCTCTAGTTTTCTTCCAGCCTT 59.089 43.478 0.00 0.00 0.00 4.35
2019 2023 3.511595 TCGTAGTACGCCGGCAGG 61.512 66.667 28.98 14.14 42.21 4.85
2465 2469 3.120385 CGCGTGGCATGAGCTCAA 61.120 61.111 22.50 0.00 41.70 3.02
2542 2546 5.648092 GCCATAGCAACATAGGGGTATTTAG 59.352 44.000 0.00 0.00 39.53 1.85
2543 2547 5.566469 GCCATAGCAACATAGGGGTATTTA 58.434 41.667 0.00 0.00 39.53 1.40
2544 2548 4.407365 GCCATAGCAACATAGGGGTATTT 58.593 43.478 0.00 0.00 39.53 1.40
2545 2549 4.034285 GCCATAGCAACATAGGGGTATT 57.966 45.455 0.00 0.00 39.53 1.89
2546 2550 3.721087 GCCATAGCAACATAGGGGTAT 57.279 47.619 0.00 0.00 39.53 2.73
2568 2959 7.464045 CGACATCGCTCTTTACATATTGTTTCA 60.464 37.037 0.00 0.00 0.00 2.69
2569 2960 6.841286 CGACATCGCTCTTTACATATTGTTTC 59.159 38.462 0.00 0.00 0.00 2.78
2576 2967 4.095932 ACTCACGACATCGCTCTTTACATA 59.904 41.667 0.14 0.00 44.43 2.29
2579 2970 2.594654 CACTCACGACATCGCTCTTTAC 59.405 50.000 0.14 0.00 44.43 2.01
2584 2975 1.471964 GATCACTCACGACATCGCTC 58.528 55.000 0.14 0.00 44.43 5.03
2587 2978 2.391322 ATCGATCACTCACGACATCG 57.609 50.000 0.00 0.00 46.33 3.84
2597 2988 0.807667 GCCGAGCACAATCGATCACT 60.808 55.000 0.00 0.00 45.56 3.41
2638 3029 2.539081 GGGAGGGGGTGTTTGAGCT 61.539 63.158 0.00 0.00 0.00 4.09
2639 3030 1.205460 TAGGGAGGGGGTGTTTGAGC 61.205 60.000 0.00 0.00 0.00 4.26
2674 3072 0.927029 AGATAACTTGGGGAAGGGGC 59.073 55.000 0.00 0.00 0.00 5.80
2710 3108 9.520204 GTAATACTAGACCTACGCAAAATAACA 57.480 33.333 0.00 0.00 0.00 2.41
2719 3117 6.705381 TCTGAAGAGTAATACTAGACCTACGC 59.295 42.308 0.00 0.00 0.00 4.42
2723 3121 9.349713 CAAGATCTGAAGAGTAATACTAGACCT 57.650 37.037 0.00 0.00 0.00 3.85
2731 3129 9.868160 TCTCCATACAAGATCTGAAGAGTAATA 57.132 33.333 0.00 0.00 0.00 0.98
2749 3147 2.467880 TCTGTCCACCCTTCTCCATAC 58.532 52.381 0.00 0.00 0.00 2.39
2751 3149 1.842562 CATCTGTCCACCCTTCTCCAT 59.157 52.381 0.00 0.00 0.00 3.41
2752 3150 1.203300 TCATCTGTCCACCCTTCTCCA 60.203 52.381 0.00 0.00 0.00 3.86
2784 3182 5.112686 GTGGATCAGATGTGAAACCTACTC 58.887 45.833 16.27 1.21 35.88 2.59
2792 3190 3.076621 GTTGCTGTGGATCAGATGTGAA 58.923 45.455 0.00 0.00 46.27 3.18
2795 3193 4.162888 TGATAGTTGCTGTGGATCAGATGT 59.837 41.667 0.00 0.00 46.27 3.06
2796 3194 4.700700 TGATAGTTGCTGTGGATCAGATG 58.299 43.478 0.00 0.00 46.27 2.90
2806 3204 4.508551 TGGATCCAATGATAGTTGCTGT 57.491 40.909 13.46 0.00 0.00 4.40
2808 3206 4.646492 GGTTTGGATCCAATGATAGTTGCT 59.354 41.667 27.53 0.00 35.70 3.91
2809 3207 4.402155 TGGTTTGGATCCAATGATAGTTGC 59.598 41.667 27.53 9.28 35.70 4.17
2811 3209 5.422012 GGTTGGTTTGGATCCAATGATAGTT 59.578 40.000 27.53 0.00 45.01 2.24
2812 3210 4.956075 GGTTGGTTTGGATCCAATGATAGT 59.044 41.667 27.53 0.00 45.01 2.12
2815 3213 3.788933 TGGTTGGTTTGGATCCAATGAT 58.211 40.909 27.53 0.00 45.01 2.45
2818 3216 3.578282 GAGTTGGTTGGTTTGGATCCAAT 59.422 43.478 27.53 8.80 45.01 3.16
2822 3220 4.145052 AGAAGAGTTGGTTGGTTTGGATC 58.855 43.478 0.00 0.00 0.00 3.36
2824 3222 3.053991 TGAGAAGAGTTGGTTGGTTTGGA 60.054 43.478 0.00 0.00 0.00 3.53
2838 3236 2.164219 GTCTGACAGAGCCTGAGAAGAG 59.836 54.545 5.10 0.00 35.18 2.85
2844 3242 1.527433 CGGTGTCTGACAGAGCCTGA 61.527 60.000 11.41 0.00 35.18 3.86
2845 3243 1.080230 CGGTGTCTGACAGAGCCTG 60.080 63.158 11.41 9.19 37.52 4.85
2855 3253 1.739466 CCAATCCATTGTCGGTGTCTG 59.261 52.381 0.00 0.00 36.06 3.51
2856 3254 1.628340 TCCAATCCATTGTCGGTGTCT 59.372 47.619 0.00 0.00 36.06 3.41
2857 3255 2.107950 TCCAATCCATTGTCGGTGTC 57.892 50.000 0.00 0.00 36.06 3.67
2941 3339 5.047519 GGACTATGCATAGTGTACCGGTTAT 60.048 44.000 37.57 13.52 43.27 1.89
2947 3345 3.552273 CCACGGACTATGCATAGTGTACC 60.552 52.174 37.57 29.90 43.27 3.34
2954 3352 0.679505 GCTCCCACGGACTATGCATA 59.320 55.000 6.20 6.20 0.00 3.14
2981 3381 6.734490 TGATTGCTCATCAACCGTAGGCAT 62.734 45.833 0.00 0.00 45.14 4.40
3036 3436 1.566298 GCCACCACCTCATCTCCCTT 61.566 60.000 0.00 0.00 0.00 3.95
3064 3478 1.271217 ACAGATCAAGCAGCTGCAAGA 60.271 47.619 38.24 32.50 45.16 3.02
3098 3512 9.968870 TTTATGTGTAACGGAATTAAGCTTTTT 57.031 25.926 3.20 0.00 42.39 1.94
3113 3527 8.789762 AGGTGAACTGGTTTATTTATGTGTAAC 58.210 33.333 0.00 0.00 37.35 2.50
3169 3585 3.326880 GGAAGGAAGGAGTAACTTCACCA 59.673 47.826 8.06 0.00 46.73 4.17
3207 3623 1.200020 GAAGCGCTAATTTGTGGCTGT 59.800 47.619 12.05 0.00 33.58 4.40
3288 3707 8.451908 AATTGGCTAGGCAGTTAGTTAAATAG 57.548 34.615 23.03 0.00 0.00 1.73
3487 3910 6.266103 TGAGATGCATCCTGGGATAATTTTTC 59.734 38.462 23.06 9.17 32.93 2.29
3492 3917 4.538891 TCATGAGATGCATCCTGGGATAAT 59.461 41.667 23.06 0.65 34.15 1.28
3494 3919 3.523792 TCATGAGATGCATCCTGGGATA 58.476 45.455 23.06 2.67 34.15 2.59
3517 3942 8.585471 ATCAACATCCAAAGTATCAAATGAGT 57.415 30.769 0.00 0.00 0.00 3.41
3574 5396 5.146010 AGATCTGTCTGGAGTCAAACTTC 57.854 43.478 0.00 0.00 32.13 3.01
3671 5494 9.022915 CGGACGTCATTTTAGTTACACATAATA 57.977 33.333 18.91 0.00 0.00 0.98
3672 5495 7.546667 ACGGACGTCATTTTAGTTACACATAAT 59.453 33.333 18.91 0.00 0.00 1.28
3673 5496 6.867816 ACGGACGTCATTTTAGTTACACATAA 59.132 34.615 18.91 0.00 0.00 1.90
3674 5497 6.308524 CACGGACGTCATTTTAGTTACACATA 59.691 38.462 18.91 0.00 0.00 2.29
3675 5498 5.119588 CACGGACGTCATTTTAGTTACACAT 59.880 40.000 18.91 0.00 0.00 3.21
3676 5499 4.445052 CACGGACGTCATTTTAGTTACACA 59.555 41.667 18.91 0.00 0.00 3.72
4305 6128 2.434843 CCTCGCCACCTCTGCCATA 61.435 63.158 0.00 0.00 0.00 2.74
4633 6456 3.057596 CACACAAGTATGGCCGTTGATTT 60.058 43.478 0.77 0.00 0.00 2.17
4856 6708 7.343357 ACAGAGAGAGTAGTATTCTGCTTAGT 58.657 38.462 0.00 0.00 39.01 2.24
4974 6865 7.386851 TGACCTAATTCTCTAGTTGGTTCTTG 58.613 38.462 0.00 0.00 0.00 3.02
4982 6873 7.042335 CGGTGATTTGACCTAATTCTCTAGTT 58.958 38.462 0.00 0.00 33.35 2.24
5061 6952 4.542735 GGTGAAAATTCGATCGGTTTGTT 58.457 39.130 16.41 3.55 0.00 2.83
5072 6963 5.349270 TGGTTAGTATCACGGTGAAAATTCG 59.651 40.000 15.72 0.00 0.00 3.34
5091 6982 3.371034 TCGACCTCAGATCCAATGGTTA 58.629 45.455 0.00 0.00 0.00 2.85
5092 6983 2.187958 TCGACCTCAGATCCAATGGTT 58.812 47.619 0.00 0.00 0.00 3.67
5103 6994 2.482142 GCCTAGACCAAATCGACCTCAG 60.482 54.545 0.00 0.00 0.00 3.35
5169 7080 0.036952 CTCTAGCGGGGGCATGTATG 60.037 60.000 0.00 0.00 0.00 2.39
5213 7124 3.055021 GGGGGAGCTGCCTTATTCTATAC 60.055 52.174 24.77 2.62 36.66 1.47
5216 7127 1.435256 GGGGGAGCTGCCTTATTCTA 58.565 55.000 24.77 0.00 36.66 2.10
5218 7129 1.227973 CGGGGGAGCTGCCTTATTC 60.228 63.158 24.77 6.57 36.66 1.75
5228 7139 2.675423 GGTTTTCACCGGGGGAGC 60.675 66.667 2.42 0.00 31.60 4.70
5251 7162 4.475016 AGAACCTACATTTATGCAGGAGGT 59.525 41.667 14.52 0.91 42.78 3.85
5258 7169 6.823689 TCAAAGGAGAGAACCTACATTTATGC 59.176 38.462 0.00 0.00 39.62 3.14
5287 7198 1.277557 TCTTCTTGAGCTTGAGCCCTC 59.722 52.381 0.00 0.00 43.38 4.30


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.