Multiple sequence alignment - TraesCS4D01G148400

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G148400 chr4D 100.000 5738 0 0 1 5738 147454617 147448880 0.000000e+00 10597.0
1 TraesCS4D01G148400 chr4D 91.441 479 37 3 5218 5695 147444014 147443539 0.000000e+00 654.0
2 TraesCS4D01G148400 chr4D 87.719 513 56 6 5224 5734 371785979 371785472 4.950000e-165 592.0
3 TraesCS4D01G148400 chr4D 91.633 251 21 0 573 823 252186814 252187064 1.180000e-91 348.0
4 TraesCS4D01G148400 chr4D 95.906 171 5 2 4125 4293 22589302 22589472 5.660000e-70 276.0
5 TraesCS4D01G148400 chr4D 94.828 174 7 2 4125 4297 75782052 75782224 2.630000e-68 270.0
6 TraesCS4D01G148400 chr4D 81.013 79 11 3 5069 5145 392005566 392005490 6.210000e-05 60.2
7 TraesCS4D01G148400 chrUn 97.345 2637 56 4 1075 3697 55783419 55780783 0.000000e+00 4470.0
8 TraesCS4D01G148400 chrUn 90.596 957 54 10 4289 5222 55780389 55779446 0.000000e+00 1236.0
9 TraesCS4D01G148400 chrUn 95.663 392 10 3 3743 4127 55780780 55780389 1.760000e-174 623.0
10 TraesCS4D01G148400 chrUn 89.567 393 40 1 109 501 55785931 55785540 1.110000e-136 497.0
11 TraesCS4D01G148400 chrUn 89.223 399 42 1 103 501 302515820 302516217 1.110000e-136 497.0
12 TraesCS4D01G148400 chrUn 98.450 129 2 0 897 1025 55783538 55783410 1.610000e-55 228.0
13 TraesCS4D01G148400 chr4A 96.675 2346 63 5 893 3223 349310664 349308319 0.000000e+00 3886.0
14 TraesCS4D01G148400 chr4A 96.266 616 22 1 4289 4904 349296238 349295624 0.000000e+00 1009.0
15 TraesCS4D01G148400 chr4A 94.841 504 20 4 3629 4127 349296740 349296238 0.000000e+00 782.0
16 TraesCS4D01G148400 chr4A 97.429 389 8 2 3210 3598 349297126 349296740 0.000000e+00 662.0
17 TraesCS4D01G148400 chr4A 95.858 169 6 1 4126 4293 362068075 362067907 7.330000e-69 272.0
18 TraesCS4D01G148400 chr4A 89.305 187 18 2 5036 5222 349295051 349294867 3.460000e-57 233.0
19 TraesCS4D01G148400 chr4A 81.013 79 10 4 5032 5106 588174721 588174798 2.230000e-04 58.4
20 TraesCS4D01G148400 chr2B 90.541 518 45 4 5223 5738 257628737 257628222 0.000000e+00 682.0
21 TraesCS4D01G148400 chr2B 90.800 250 23 0 574 823 413085069 413084820 9.210000e-88 335.0
22 TraesCS4D01G148400 chr2B 95.322 171 7 1 4126 4295 719520505 719520675 2.630000e-68 270.0
23 TraesCS4D01G148400 chr2B 82.609 69 9 3 5032 5098 210575459 210575392 2.230000e-04 58.4
24 TraesCS4D01G148400 chr2B 82.609 69 9 3 5032 5098 778694493 778694426 2.230000e-04 58.4
25 TraesCS4D01G148400 chr6B 89.210 519 50 5 5223 5738 193879000 193878485 1.350000e-180 643.0
26 TraesCS4D01G148400 chr6B 87.791 516 59 3 5223 5736 516321028 516321541 8.230000e-168 601.0
27 TraesCS4D01G148400 chr6B 91.848 184 11 4 4125 4307 568047231 568047051 2.650000e-63 254.0
28 TraesCS4D01G148400 chr7D 87.984 516 58 4 5223 5736 306540690 306541203 1.770000e-169 606.0
29 TraesCS4D01G148400 chr7D 94.318 176 8 2 4126 4299 522504859 522504684 9.480000e-68 268.0
30 TraesCS4D01G148400 chr7D 82.609 69 9 3 5032 5098 573231666 573231733 2.230000e-04 58.4
31 TraesCS4D01G148400 chr5D 87.885 520 55 8 5222 5738 40022932 40022418 6.360000e-169 604.0
32 TraesCS4D01G148400 chr5D 87.891 512 56 5 5223 5732 473628175 473628682 1.060000e-166 597.0
33 TraesCS4D01G148400 chr5D 94.167 240 14 0 584 823 456039768 456040007 3.270000e-97 366.0
34 TraesCS4D01G148400 chr5D 89.552 268 26 1 559 826 135656969 135656704 7.120000e-89 339.0
35 TraesCS4D01G148400 chr7B 87.645 518 60 4 5222 5737 489424671 489425186 2.960000e-167 599.0
36 TraesCS4D01G148400 chr7B 93.443 183 9 3 4123 4304 590867186 590867366 9.480000e-68 268.0
37 TraesCS4D01G148400 chr7B 82.171 129 21 2 395 522 424157544 424157671 6.080000e-20 110.0
38 TraesCS4D01G148400 chr7B 84.416 77 10 1 5069 5145 551419727 551419801 2.220000e-09 75.0
39 TraesCS4D01G148400 chr2A 91.985 262 21 0 562 823 636904424 636904685 9.080000e-98 368.0
40 TraesCS4D01G148400 chr2D 89.377 273 25 3 553 823 6504542 6504812 1.980000e-89 340.0
41 TraesCS4D01G148400 chr2D 92.265 181 10 4 4125 4304 174431217 174431394 2.650000e-63 254.0
42 TraesCS4D01G148400 chr2D 80.769 78 9 4 5071 5145 484651966 484652040 8.030000e-04 56.5
43 TraesCS4D01G148400 chr5B 90.873 252 23 0 572 823 253166605 253166354 7.120000e-89 339.0
44 TraesCS4D01G148400 chr3B 89.811 265 22 5 560 823 571760199 571760459 9.210000e-88 335.0
45 TraesCS4D01G148400 chr3B 94.857 175 6 3 4115 4287 120617088 120616915 2.630000e-68 270.0
46 TraesCS4D01G148400 chr1A 88.476 269 31 0 555 823 113871103 113871371 5.540000e-85 326.0
47 TraesCS4D01G148400 chr1A 90.306 196 12 7 4126 4317 33408495 33408303 3.430000e-62 250.0
48 TraesCS4D01G148400 chr1A 81.043 211 35 5 172 382 373775405 373775610 4.600000e-36 163.0
49 TraesCS4D01G148400 chr1A 82.609 69 9 3 5032 5098 320122547 320122614 2.230000e-04 58.4
50 TraesCS4D01G148400 chr1D 94.886 176 7 2 4126 4300 178466306 178466480 2.040000e-69 274.0
51 TraesCS4D01G148400 chr1D 92.265 181 12 2 4125 4304 32711086 32710907 7.380000e-64 255.0
52 TraesCS4D01G148400 chr3A 93.370 181 10 2 4116 4294 70479034 70479214 3.410000e-67 267.0
53 TraesCS4D01G148400 chr3A 92.222 180 13 1 4126 4304 445872357 445872536 2.650000e-63 254.0
54 TraesCS4D01G148400 chr3A 82.278 79 10 3 5069 5145 537427833 537427909 1.330000e-06 65.8
55 TraesCS4D01G148400 chr3D 94.545 165 7 2 4126 4289 327121804 327121967 2.650000e-63 254.0
56 TraesCS4D01G148400 chr5A 94.410 161 8 1 4125 4284 439430251 439430411 4.440000e-61 246.0
57 TraesCS4D01G148400 chr4B 89.418 189 15 5 4129 4315 583136230 583136045 3.460000e-57 233.0
58 TraesCS4D01G148400 chr7A 82.171 129 22 1 395 522 470846255 470846383 6.080000e-20 110.0
59 TraesCS4D01G148400 chr7A 83.495 103 15 2 432 533 75023333 75023232 1.700000e-15 95.3
60 TraesCS4D01G148400 chr6A 87.234 94 10 2 420 512 65858998 65859090 7.860000e-19 106.0
61 TraesCS4D01G148400 chr1B 80.870 115 20 2 420 532 502417312 502417198 7.920000e-14 89.8
62 TraesCS4D01G148400 chr6D 81.579 76 11 3 5025 5098 280292381 280292455 6.210000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G148400 chr4D 147448880 147454617 5737 True 10597.0 10597 100.00000 1 5738 1 chr4D.!!$R2 5737
1 TraesCS4D01G148400 chr4D 371785472 371785979 507 True 592.0 592 87.71900 5224 5734 1 chr4D.!!$R3 510
2 TraesCS4D01G148400 chrUn 55779446 55785931 6485 True 1410.8 4470 94.32420 109 5222 5 chrUn.!!$R1 5113
3 TraesCS4D01G148400 chr4A 349308319 349310664 2345 True 3886.0 3886 96.67500 893 3223 1 chr4A.!!$R1 2330
4 TraesCS4D01G148400 chr4A 349294867 349297126 2259 True 671.5 1009 94.46025 3210 5222 4 chr4A.!!$R3 2012
5 TraesCS4D01G148400 chr2B 257628222 257628737 515 True 682.0 682 90.54100 5223 5738 1 chr2B.!!$R2 515
6 TraesCS4D01G148400 chr6B 193878485 193879000 515 True 643.0 643 89.21000 5223 5738 1 chr6B.!!$R1 515
7 TraesCS4D01G148400 chr6B 516321028 516321541 513 False 601.0 601 87.79100 5223 5736 1 chr6B.!!$F1 513
8 TraesCS4D01G148400 chr7D 306540690 306541203 513 False 606.0 606 87.98400 5223 5736 1 chr7D.!!$F1 513
9 TraesCS4D01G148400 chr5D 40022418 40022932 514 True 604.0 604 87.88500 5222 5738 1 chr5D.!!$R1 516
10 TraesCS4D01G148400 chr5D 473628175 473628682 507 False 597.0 597 87.89100 5223 5732 1 chr5D.!!$F2 509
11 TraesCS4D01G148400 chr7B 489424671 489425186 515 False 599.0 599 87.64500 5222 5737 1 chr7B.!!$F2 515

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
87 88 0.039618 ACAAATGACATCGCCCCCTT 59.960 50.000 0.00 0.00 0.00 3.95 F
100 101 0.106918 CCCCCTTAGGCGCATGTTAA 60.107 55.000 10.83 1.16 0.00 2.01 F
671 1635 0.108186 TGCTACTCCAATGGTGAGCG 60.108 55.000 8.49 0.00 32.98 5.03 F
674 1638 0.175760 TACTCCAATGGTGAGCGCTC 59.824 55.000 30.42 30.42 32.98 5.03 F
997 2743 0.332632 CTCCCTCAATCCCCTTTGCA 59.667 55.000 0.00 0.00 0.00 4.08 F
1364 3110 0.671251 ACAATCGATCCTCTCTCGCC 59.329 55.000 0.00 0.00 36.11 5.54 F
2593 4356 1.270550 GCCCAACATGTCTTGAAGGTG 59.729 52.381 0.00 0.00 0.00 4.00 F
4140 5924 1.569548 TCTGATACTCCCTCCGTTCCT 59.430 52.381 0.00 0.00 0.00 3.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1104 2850 0.250295 CTTCAAGGGCGTGAGGAACA 60.250 55.000 0.00 0.00 0.00 3.18 R
1439 3185 0.394899 GTAGCAGCAAATCAGCCCCT 60.395 55.000 0.00 0.00 34.23 4.79 R
1599 3347 2.029290 TCCTAAACGCACCAGAAGTCTC 60.029 50.000 0.00 0.00 0.00 3.36 R
1661 3409 2.273908 GGGGACGAGACTTACAGCA 58.726 57.895 0.00 0.00 0.00 4.41 R
2414 4177 2.586258 ACTCATCGTTTCCATCTCCG 57.414 50.000 0.00 0.00 0.00 4.63 R
3168 4931 1.098050 GCCAAGGCATGTCCTGTAAG 58.902 55.000 6.14 1.64 46.94 2.34 R
4271 6055 0.040646 TCTGCTCCCTCCGTTCCTAA 59.959 55.000 0.00 0.00 0.00 2.69 R
5027 7270 0.033601 TTTGGGCCGGCAATGACTAT 60.034 50.000 30.85 0.00 0.00 2.12 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 5.911378 TGTGCTATGTTCATATGGCAAAA 57.089 34.783 2.13 0.00 44.46 2.44
23 24 6.468333 TGTGCTATGTTCATATGGCAAAAT 57.532 33.333 2.13 0.00 44.46 1.82
24 25 7.579761 TGTGCTATGTTCATATGGCAAAATA 57.420 32.000 2.13 0.00 44.46 1.40
25 26 7.650890 TGTGCTATGTTCATATGGCAAAATAG 58.349 34.615 2.13 6.45 44.46 1.73
26 27 7.086376 GTGCTATGTTCATATGGCAAAATAGG 58.914 38.462 12.81 0.00 44.46 2.57
27 28 7.003482 TGCTATGTTCATATGGCAAAATAGGA 58.997 34.615 12.81 9.16 40.85 2.94
28 29 7.505248 TGCTATGTTCATATGGCAAAATAGGAA 59.495 33.333 12.81 0.00 40.85 3.36
29 30 8.359642 GCTATGTTCATATGGCAAAATAGGAAA 58.640 33.333 12.81 0.00 35.33 3.13
32 33 9.603921 ATGTTCATATGGCAAAATAGGAAAAAG 57.396 29.630 2.13 0.00 35.33 2.27
33 34 8.811017 TGTTCATATGGCAAAATAGGAAAAAGA 58.189 29.630 2.13 0.00 35.33 2.52
34 35 9.822185 GTTCATATGGCAAAATAGGAAAAAGAT 57.178 29.630 2.13 0.00 35.33 2.40
36 37 9.820725 TCATATGGCAAAATAGGAAAAAGATTG 57.179 29.630 2.13 0.00 0.00 2.67
37 38 9.820725 CATATGGCAAAATAGGAAAAAGATTGA 57.179 29.630 0.00 0.00 0.00 2.57
41 42 9.034800 TGGCAAAATAGGAAAAAGATTGATAGT 57.965 29.630 0.00 0.00 0.00 2.12
42 43 9.875691 GGCAAAATAGGAAAAAGATTGATAGTT 57.124 29.630 0.00 0.00 0.00 2.24
50 51 9.579932 AGGAAAAAGATTGATAGTTTTGTCTCT 57.420 29.630 0.00 0.00 0.00 3.10
65 66 8.131731 AGTTTTGTCTCTAGAAATTTCAACAGC 58.868 33.333 19.99 6.39 0.00 4.40
66 67 7.807977 TTTGTCTCTAGAAATTTCAACAGCT 57.192 32.000 19.99 0.99 0.00 4.24
67 68 7.426929 TTGTCTCTAGAAATTTCAACAGCTC 57.573 36.000 19.99 8.75 0.00 4.09
68 69 6.524734 TGTCTCTAGAAATTTCAACAGCTCA 58.475 36.000 19.99 10.67 0.00 4.26
69 70 6.425114 TGTCTCTAGAAATTTCAACAGCTCAC 59.575 38.462 19.99 10.39 0.00 3.51
70 71 6.425114 GTCTCTAGAAATTTCAACAGCTCACA 59.575 38.462 19.99 0.00 0.00 3.58
71 72 6.992123 TCTCTAGAAATTTCAACAGCTCACAA 59.008 34.615 19.99 0.00 0.00 3.33
72 73 7.498900 TCTCTAGAAATTTCAACAGCTCACAAA 59.501 33.333 19.99 0.00 0.00 2.83
73 74 8.169977 TCTAGAAATTTCAACAGCTCACAAAT 57.830 30.769 19.99 0.00 0.00 2.32
74 75 8.077991 TCTAGAAATTTCAACAGCTCACAAATG 58.922 33.333 19.99 0.00 0.00 2.32
75 76 6.808829 AGAAATTTCAACAGCTCACAAATGA 58.191 32.000 19.99 0.00 0.00 2.57
76 77 6.698766 AGAAATTTCAACAGCTCACAAATGAC 59.301 34.615 19.99 0.00 0.00 3.06
77 78 4.979943 TTTCAACAGCTCACAAATGACA 57.020 36.364 0.00 0.00 0.00 3.58
78 79 5.518848 TTTCAACAGCTCACAAATGACAT 57.481 34.783 0.00 0.00 0.00 3.06
79 80 4.754372 TCAACAGCTCACAAATGACATC 57.246 40.909 0.00 0.00 0.00 3.06
80 81 3.187022 TCAACAGCTCACAAATGACATCG 59.813 43.478 0.00 0.00 0.00 3.84
81 82 1.466167 ACAGCTCACAAATGACATCGC 59.534 47.619 0.00 0.00 0.00 4.58
82 83 1.089920 AGCTCACAAATGACATCGCC 58.910 50.000 0.00 0.00 0.00 5.54
83 84 0.099436 GCTCACAAATGACATCGCCC 59.901 55.000 0.00 0.00 0.00 6.13
84 85 0.734889 CTCACAAATGACATCGCCCC 59.265 55.000 0.00 0.00 0.00 5.80
85 86 0.679640 TCACAAATGACATCGCCCCC 60.680 55.000 0.00 0.00 0.00 5.40
86 87 0.680921 CACAAATGACATCGCCCCCT 60.681 55.000 0.00 0.00 0.00 4.79
87 88 0.039618 ACAAATGACATCGCCCCCTT 59.960 50.000 0.00 0.00 0.00 3.95
88 89 1.283613 ACAAATGACATCGCCCCCTTA 59.716 47.619 0.00 0.00 0.00 2.69
89 90 1.949525 CAAATGACATCGCCCCCTTAG 59.050 52.381 0.00 0.00 0.00 2.18
90 91 0.474184 AATGACATCGCCCCCTTAGG 59.526 55.000 0.00 0.00 0.00 2.69
97 98 4.506255 GCCCCCTTAGGCGCATGT 62.506 66.667 10.83 0.00 44.57 3.21
98 99 2.275418 CCCCCTTAGGCGCATGTT 59.725 61.111 10.83 0.00 0.00 2.71
99 100 1.529796 CCCCCTTAGGCGCATGTTA 59.470 57.895 10.83 0.00 0.00 2.41
100 101 0.106918 CCCCCTTAGGCGCATGTTAA 60.107 55.000 10.83 1.16 0.00 2.01
101 102 1.683629 CCCCCTTAGGCGCATGTTAAA 60.684 52.381 10.83 0.00 0.00 1.52
102 103 1.676006 CCCCTTAGGCGCATGTTAAAG 59.324 52.381 10.83 1.95 0.00 1.85
103 104 2.639065 CCCTTAGGCGCATGTTAAAGA 58.361 47.619 10.83 0.00 0.00 2.52
104 105 3.013921 CCCTTAGGCGCATGTTAAAGAA 58.986 45.455 10.83 0.00 0.00 2.52
105 106 3.181500 CCCTTAGGCGCATGTTAAAGAAC 60.181 47.826 10.83 0.00 36.00 3.01
106 107 3.485216 CCTTAGGCGCATGTTAAAGAACG 60.485 47.826 10.83 0.00 38.51 3.95
107 108 0.168128 AGGCGCATGTTAAAGAACGC 59.832 50.000 10.83 0.00 45.19 4.84
115 116 5.399013 GCATGTTAAAGAACGCCACTAAAT 58.601 37.500 0.00 0.00 38.51 1.40
117 118 7.193595 GCATGTTAAAGAACGCCACTAAATAT 58.806 34.615 0.00 0.00 38.51 1.28
127 128 7.438459 AGAACGCCACTAAATATCATTACTGTC 59.562 37.037 0.00 0.00 0.00 3.51
130 131 6.346919 CGCCACTAAATATCATTACTGTCAGC 60.347 42.308 0.00 0.00 0.00 4.26
139 140 6.690194 ATCATTACTGTCAGCTCAAAATCC 57.310 37.500 0.00 0.00 0.00 3.01
143 144 2.549754 ACTGTCAGCTCAAAATCCGTTG 59.450 45.455 0.00 0.00 0.00 4.10
150 151 6.480320 GTCAGCTCAAAATCCGTTGACTATAT 59.520 38.462 0.00 0.00 33.92 0.86
184 185 6.324819 CAAAATATCTGTGGACCAACATGTC 58.675 40.000 0.00 0.00 34.42 3.06
191 192 1.002430 TGGACCAACATGTCAGCTCTC 59.998 52.381 0.00 0.00 36.97 3.20
193 194 1.277557 GACCAACATGTCAGCTCTCCT 59.722 52.381 0.00 0.00 35.29 3.69
196 197 2.354259 CAACATGTCAGCTCTCCTTCC 58.646 52.381 0.00 0.00 0.00 3.46
213 214 8.553085 TCTCCTTCCATCTCACTATGATAAAA 57.447 34.615 0.00 0.00 0.00 1.52
230 231 3.320673 AAAAGCTTAGGTCTCACTCGG 57.679 47.619 0.00 0.00 0.00 4.63
238 239 0.613777 GGTCTCACTCGGTTCCCAAT 59.386 55.000 0.00 0.00 0.00 3.16
239 240 1.829222 GGTCTCACTCGGTTCCCAATA 59.171 52.381 0.00 0.00 0.00 1.90
240 241 2.235402 GGTCTCACTCGGTTCCCAATAA 59.765 50.000 0.00 0.00 0.00 1.40
243 244 1.619827 TCACTCGGTTCCCAATAACGT 59.380 47.619 0.00 0.00 0.00 3.99
288 289 4.893424 TTGTTTGCTTACTCCTGACAAC 57.107 40.909 0.00 0.00 0.00 3.32
293 294 3.230976 TGCTTACTCCTGACAACTGAGA 58.769 45.455 0.00 0.00 0.00 3.27
305 306 4.102524 TGACAACTGAGACCCACACTTATT 59.897 41.667 0.00 0.00 0.00 1.40
309 310 7.913789 ACAACTGAGACCCACACTTATTATTA 58.086 34.615 0.00 0.00 0.00 0.98
327 328 9.868160 TTATTATTATGAGACAGAGAGACCTGA 57.132 33.333 0.00 0.00 37.59 3.86
333 334 2.824936 AGACAGAGAGACCTGACATGTG 59.175 50.000 1.15 0.00 37.59 3.21
372 373 3.331150 GTCATACAACATGGTCAACGGA 58.669 45.455 0.00 0.00 0.00 4.69
421 422 2.082140 TGACCTACCAGTGTCAGTGT 57.918 50.000 6.91 0.00 36.62 3.55
422 423 3.232720 TGACCTACCAGTGTCAGTGTA 57.767 47.619 6.91 0.00 36.62 2.90
501 502 2.223249 GCACTTTTGAGCAAACGTCTCA 60.223 45.455 1.54 1.54 38.67 3.27
502 503 3.548818 GCACTTTTGAGCAAACGTCTCAT 60.549 43.478 6.30 0.00 39.96 2.90
503 504 3.970610 CACTTTTGAGCAAACGTCTCATG 59.029 43.478 6.30 0.00 39.96 3.07
505 506 4.335315 ACTTTTGAGCAAACGTCTCATGAA 59.665 37.500 6.30 4.72 39.96 2.57
506 507 4.891627 TTTGAGCAAACGTCTCATGAAA 57.108 36.364 6.30 0.00 39.96 2.69
507 508 3.878086 TGAGCAAACGTCTCATGAAAC 57.122 42.857 0.00 0.00 35.81 2.78
508 509 2.220824 TGAGCAAACGTCTCATGAAACG 59.779 45.455 19.63 19.63 44.22 3.60
509 510 2.475111 GAGCAAACGTCTCATGAAACGA 59.525 45.455 27.27 3.64 41.29 3.85
513 514 4.436050 GCAAACGTCTCATGAAACGATGAT 60.436 41.667 27.27 8.13 41.29 2.45
514 515 5.220397 GCAAACGTCTCATGAAACGATGATA 60.220 40.000 27.27 0.00 41.29 2.15
515 516 6.510157 GCAAACGTCTCATGAAACGATGATAT 60.510 38.462 27.27 1.25 41.29 1.63
516 517 7.401860 CAAACGTCTCATGAAACGATGATATT 58.598 34.615 27.27 7.73 41.29 1.28
519 520 7.974675 ACGTCTCATGAAACGATGATATTTTT 58.025 30.769 27.27 0.00 41.29 1.94
520 521 7.904977 ACGTCTCATGAAACGATGATATTTTTG 59.095 33.333 27.27 0.00 41.29 2.44
521 522 8.116136 CGTCTCATGAAACGATGATATTTTTGA 58.884 33.333 16.54 0.00 41.29 2.69
522 523 9.214953 GTCTCATGAAACGATGATATTTTTGAC 57.785 33.333 0.00 0.00 31.88 3.18
524 525 7.969314 TCATGAAACGATGATATTTTTGACGA 58.031 30.769 0.00 0.00 0.00 4.20
525 526 8.116136 TCATGAAACGATGATATTTTTGACGAG 58.884 33.333 0.00 0.00 0.00 4.18
526 527 7.359262 TGAAACGATGATATTTTTGACGAGT 57.641 32.000 0.00 0.00 0.00 4.18
545 1509 9.701098 TGACGAGTTATAAACAAAACTGACTAT 57.299 29.630 0.00 0.00 36.10 2.12
604 1568 7.404671 TCAATATAAAAAGACTCAAAGGGGC 57.595 36.000 0.00 0.00 0.00 5.80
605 1569 6.951198 TCAATATAAAAAGACTCAAAGGGGCA 59.049 34.615 0.00 0.00 0.00 5.36
606 1570 7.122650 TCAATATAAAAAGACTCAAAGGGGCAG 59.877 37.037 0.00 0.00 0.00 4.85
607 1571 3.312736 AAAAAGACTCAAAGGGGCAGA 57.687 42.857 0.00 0.00 0.00 4.26
608 1572 3.532641 AAAAGACTCAAAGGGGCAGAT 57.467 42.857 0.00 0.00 0.00 2.90
609 1573 3.532641 AAAGACTCAAAGGGGCAGATT 57.467 42.857 0.00 0.00 0.00 2.40
610 1574 2.797177 AGACTCAAAGGGGCAGATTC 57.203 50.000 0.00 0.00 0.00 2.52
611 1575 1.988107 AGACTCAAAGGGGCAGATTCA 59.012 47.619 0.00 0.00 0.00 2.57
612 1576 2.376518 AGACTCAAAGGGGCAGATTCAA 59.623 45.455 0.00 0.00 0.00 2.69
613 1577 2.489722 GACTCAAAGGGGCAGATTCAAC 59.510 50.000 0.00 0.00 0.00 3.18
614 1578 2.158475 ACTCAAAGGGGCAGATTCAACA 60.158 45.455 0.00 0.00 0.00 3.33
615 1579 2.892852 CTCAAAGGGGCAGATTCAACAA 59.107 45.455 0.00 0.00 0.00 2.83
616 1580 3.303938 TCAAAGGGGCAGATTCAACAAA 58.696 40.909 0.00 0.00 0.00 2.83
617 1581 3.903090 TCAAAGGGGCAGATTCAACAAAT 59.097 39.130 0.00 0.00 0.00 2.32
618 1582 4.021192 TCAAAGGGGCAGATTCAACAAATC 60.021 41.667 0.00 0.00 43.58 2.17
619 1583 2.460669 AGGGGCAGATTCAACAAATCC 58.539 47.619 0.00 0.00 44.20 3.01
620 1584 1.482182 GGGGCAGATTCAACAAATCCC 59.518 52.381 0.00 0.00 44.20 3.85
621 1585 1.134946 GGGCAGATTCAACAAATCCCG 59.865 52.381 0.00 0.00 44.20 5.14
622 1586 2.091541 GGCAGATTCAACAAATCCCGA 58.908 47.619 0.00 0.00 44.20 5.14
623 1587 2.159379 GGCAGATTCAACAAATCCCGAC 60.159 50.000 0.00 0.00 44.20 4.79
624 1588 2.159379 GCAGATTCAACAAATCCCGACC 60.159 50.000 0.00 0.00 44.20 4.79
625 1589 2.095853 CAGATTCAACAAATCCCGACCG 59.904 50.000 0.00 0.00 44.20 4.79
626 1590 2.081462 GATTCAACAAATCCCGACCGT 58.919 47.619 0.00 0.00 38.27 4.83
627 1591 1.515081 TTCAACAAATCCCGACCGTC 58.485 50.000 0.00 0.00 0.00 4.79
628 1592 0.393448 TCAACAAATCCCGACCGTCA 59.607 50.000 0.00 0.00 0.00 4.35
629 1593 1.202663 TCAACAAATCCCGACCGTCAA 60.203 47.619 0.00 0.00 0.00 3.18
630 1594 1.604755 CAACAAATCCCGACCGTCAAA 59.395 47.619 0.00 0.00 0.00 2.69
631 1595 2.194201 ACAAATCCCGACCGTCAAAT 57.806 45.000 0.00 0.00 0.00 2.32
632 1596 2.081462 ACAAATCCCGACCGTCAAATC 58.919 47.619 0.00 0.00 0.00 2.17
633 1597 2.080693 CAAATCCCGACCGTCAAATCA 58.919 47.619 0.00 0.00 0.00 2.57
634 1598 2.024176 AATCCCGACCGTCAAATCAG 57.976 50.000 0.00 0.00 0.00 2.90
635 1599 0.178068 ATCCCGACCGTCAAATCAGG 59.822 55.000 0.00 0.00 0.00 3.86
636 1600 1.189524 TCCCGACCGTCAAATCAGGT 61.190 55.000 0.00 0.00 41.63 4.00
642 1606 2.711542 ACCGTCAAATCAGGTCAATCC 58.288 47.619 0.00 0.00 31.69 3.01
643 1607 2.039746 ACCGTCAAATCAGGTCAATCCA 59.960 45.455 0.00 0.00 39.02 3.41
644 1608 3.081061 CCGTCAAATCAGGTCAATCCAA 58.919 45.455 0.00 0.00 39.02 3.53
645 1609 3.119849 CCGTCAAATCAGGTCAATCCAAC 60.120 47.826 0.00 0.00 39.02 3.77
646 1610 3.501828 CGTCAAATCAGGTCAATCCAACA 59.498 43.478 0.00 0.00 39.02 3.33
647 1611 4.023279 CGTCAAATCAGGTCAATCCAACAA 60.023 41.667 0.00 0.00 39.02 2.83
648 1612 5.222631 GTCAAATCAGGTCAATCCAACAAC 58.777 41.667 0.00 0.00 39.02 3.32
649 1613 5.010012 GTCAAATCAGGTCAATCCAACAACT 59.990 40.000 0.00 0.00 39.02 3.16
650 1614 5.241506 TCAAATCAGGTCAATCCAACAACTC 59.758 40.000 0.00 0.00 39.02 3.01
651 1615 3.855255 TCAGGTCAATCCAACAACTCA 57.145 42.857 0.00 0.00 39.02 3.41
652 1616 4.371624 TCAGGTCAATCCAACAACTCAT 57.628 40.909 0.00 0.00 39.02 2.90
653 1617 4.074259 TCAGGTCAATCCAACAACTCATG 58.926 43.478 0.00 0.00 39.02 3.07
654 1618 2.821969 AGGTCAATCCAACAACTCATGC 59.178 45.455 0.00 0.00 39.02 4.06
655 1619 2.821969 GGTCAATCCAACAACTCATGCT 59.178 45.455 0.00 0.00 35.97 3.79
656 1620 4.009675 GGTCAATCCAACAACTCATGCTA 58.990 43.478 0.00 0.00 35.97 3.49
657 1621 4.142600 GGTCAATCCAACAACTCATGCTAC 60.143 45.833 0.00 0.00 35.97 3.58
658 1622 4.697352 GTCAATCCAACAACTCATGCTACT 59.303 41.667 0.00 0.00 0.00 2.57
659 1623 4.937620 TCAATCCAACAACTCATGCTACTC 59.062 41.667 0.00 0.00 0.00 2.59
660 1624 3.334583 TCCAACAACTCATGCTACTCC 57.665 47.619 0.00 0.00 0.00 3.85
661 1625 2.637382 TCCAACAACTCATGCTACTCCA 59.363 45.455 0.00 0.00 0.00 3.86
662 1626 3.072330 TCCAACAACTCATGCTACTCCAA 59.928 43.478 0.00 0.00 0.00 3.53
663 1627 4.012374 CCAACAACTCATGCTACTCCAAT 58.988 43.478 0.00 0.00 0.00 3.16
664 1628 4.142534 CCAACAACTCATGCTACTCCAATG 60.143 45.833 0.00 0.00 0.00 2.82
665 1629 3.614092 ACAACTCATGCTACTCCAATGG 58.386 45.455 0.00 0.00 0.00 3.16
666 1630 3.009473 ACAACTCATGCTACTCCAATGGT 59.991 43.478 0.00 0.00 0.00 3.55
667 1631 3.272574 ACTCATGCTACTCCAATGGTG 57.727 47.619 0.00 0.00 0.00 4.17
668 1632 2.840038 ACTCATGCTACTCCAATGGTGA 59.160 45.455 8.49 0.00 0.00 4.02
669 1633 3.118482 ACTCATGCTACTCCAATGGTGAG 60.118 47.826 8.49 9.92 38.18 3.51
670 1634 1.945394 CATGCTACTCCAATGGTGAGC 59.055 52.381 8.49 11.35 32.98 4.26
671 1635 0.108186 TGCTACTCCAATGGTGAGCG 60.108 55.000 8.49 0.00 32.98 5.03
672 1636 1.432270 GCTACTCCAATGGTGAGCGC 61.432 60.000 8.49 0.00 32.98 5.92
673 1637 0.176680 CTACTCCAATGGTGAGCGCT 59.823 55.000 11.27 11.27 32.98 5.92
674 1638 0.175760 TACTCCAATGGTGAGCGCTC 59.824 55.000 30.42 30.42 32.98 5.03
675 1639 1.078918 CTCCAATGGTGAGCGCTCA 60.079 57.895 35.30 35.30 37.24 4.26
676 1640 0.674581 CTCCAATGGTGAGCGCTCAA 60.675 55.000 39.63 26.77 41.85 3.02
681 1645 3.972227 GGTGAGCGCTCAACATGT 58.028 55.556 42.62 5.80 46.18 3.21
682 1646 2.247790 GGTGAGCGCTCAACATGTT 58.752 52.632 42.62 4.92 46.18 2.71
683 1647 0.593128 GGTGAGCGCTCAACATGTTT 59.407 50.000 42.62 4.05 46.18 2.83
684 1648 1.804151 GGTGAGCGCTCAACATGTTTA 59.196 47.619 42.62 16.84 46.18 2.01
685 1649 2.412847 GGTGAGCGCTCAACATGTTTAC 60.413 50.000 42.62 26.03 46.18 2.01
686 1650 2.480419 GTGAGCGCTCAACATGTTTACT 59.520 45.455 39.63 0.00 41.85 2.24
687 1651 2.480037 TGAGCGCTCAACATGTTTACTG 59.520 45.455 36.62 0.00 36.53 2.74
688 1652 2.480419 GAGCGCTCAACATGTTTACTGT 59.520 45.455 31.91 0.00 0.00 3.55
689 1653 2.224079 AGCGCTCAACATGTTTACTGTG 59.776 45.455 8.77 7.14 0.00 3.66
690 1654 2.574322 CGCTCAACATGTTTACTGTGC 58.426 47.619 8.77 10.01 0.00 4.57
691 1655 2.032117 CGCTCAACATGTTTACTGTGCA 60.032 45.455 8.77 0.00 0.00 4.57
692 1656 3.558505 GCTCAACATGTTTACTGTGCAG 58.441 45.455 8.77 0.00 0.00 4.41
693 1657 3.003689 GCTCAACATGTTTACTGTGCAGT 59.996 43.478 8.77 9.90 45.02 4.40
694 1658 4.498009 GCTCAACATGTTTACTGTGCAGTT 60.498 41.667 8.77 0.00 42.54 3.16
695 1659 5.277779 GCTCAACATGTTTACTGTGCAGTTA 60.278 40.000 8.77 0.00 42.54 2.24
697 1661 7.270757 TCAACATGTTTACTGTGCAGTTAAT 57.729 32.000 8.77 0.00 42.54 1.40
700 1664 9.277565 CAACATGTTTACTGTGCAGTTAATATC 57.722 33.333 8.77 0.00 42.54 1.63
736 1700 3.698029 GCCAATGCGAATCACATACTT 57.302 42.857 0.00 0.00 0.00 2.24
737 1701 4.811555 GCCAATGCGAATCACATACTTA 57.188 40.909 0.00 0.00 0.00 2.24
739 1703 5.762045 GCCAATGCGAATCACATACTTAAT 58.238 37.500 0.00 0.00 0.00 1.40
741 1705 6.797033 GCCAATGCGAATCACATACTTAATAC 59.203 38.462 0.00 0.00 0.00 1.89
742 1706 7.009440 CCAATGCGAATCACATACTTAATACG 58.991 38.462 0.00 0.00 0.00 3.06
743 1707 7.307160 CCAATGCGAATCACATACTTAATACGT 60.307 37.037 0.00 0.00 0.00 3.57
807 1850 7.489574 TTATCTAATATCAACGTGCATTGCA 57.510 32.000 7.38 7.38 35.60 4.08
820 1863 4.383850 TGCATTGCACATACCCATTTAC 57.616 40.909 7.38 0.00 31.71 2.01
821 1864 4.022603 TGCATTGCACATACCCATTTACT 58.977 39.130 7.38 0.00 31.71 2.24
828 1871 7.901283 TGCACATACCCATTTACTACTAGTA 57.099 36.000 1.89 1.89 0.00 1.82
829 1872 8.308851 TGCACATACCCATTTACTACTAGTAA 57.691 34.615 3.76 4.76 38.79 2.24
868 2464 0.947660 ATCATGTATGGAGCGCGCAG 60.948 55.000 35.10 10.68 0.00 5.18
882 2478 4.687215 GCAGCCGCTGAGTGGTGA 62.687 66.667 24.80 0.00 35.34 4.02
883 2479 2.740055 CAGCCGCTGAGTGGTGAC 60.740 66.667 15.74 0.00 35.34 3.67
884 2480 4.363990 AGCCGCTGAGTGGTGACG 62.364 66.667 14.33 0.00 35.34 4.35
997 2743 0.332632 CTCCCTCAATCCCCTTTGCA 59.667 55.000 0.00 0.00 0.00 4.08
1032 2778 3.610669 CCGCCTCCTCATCCTCCG 61.611 72.222 0.00 0.00 0.00 4.63
1234 2980 5.643777 CGCCGGATATTTCTTCTCCAATAAT 59.356 40.000 5.05 0.00 0.00 1.28
1338 3084 2.496070 TCGGATTGGACGACATTTCTCT 59.504 45.455 0.00 0.00 35.12 3.10
1347 3093 5.650703 TGGACGACATTTCTCTACTGATACA 59.349 40.000 0.00 0.00 0.00 2.29
1364 3110 0.671251 ACAATCGATCCTCTCTCGCC 59.329 55.000 0.00 0.00 36.11 5.54
1473 3219 3.077359 CTGCTACTTTTGAGGAGTTGGG 58.923 50.000 0.00 0.00 0.00 4.12
1599 3347 3.430862 CCGACCACCATGGCAACG 61.431 66.667 13.04 12.49 42.67 4.10
1661 3409 3.370840 TTTACCCAGCAGCTGATCAAT 57.629 42.857 24.90 6.53 32.44 2.57
1741 3504 9.103861 GACTTCTAATTTTGGTCCTAGAAGATG 57.896 37.037 22.57 9.66 45.33 2.90
1763 3526 6.055231 TGACAATCTTTTAACGTCCAAGTG 57.945 37.500 0.00 0.00 0.00 3.16
1883 3646 3.430929 GCTCTTCTGTCGGATTACATGGT 60.431 47.826 0.00 0.00 0.00 3.55
1932 3695 6.480651 TGTACGAGCACAAGAAAGAACAAATA 59.519 34.615 0.00 0.00 0.00 1.40
2414 4177 4.641989 ACCACTCAGACCAAATTATGATGC 59.358 41.667 0.00 0.00 0.00 3.91
2418 4181 4.129380 TCAGACCAAATTATGATGCGGAG 58.871 43.478 0.00 0.00 0.00 4.63
2593 4356 1.270550 GCCCAACATGTCTTGAAGGTG 59.729 52.381 0.00 0.00 0.00 4.00
2650 4413 4.084328 GGAAGATGTCGAGTGAGTTTTGTG 60.084 45.833 0.00 0.00 0.00 3.33
2685 4448 7.445945 AGTTTCATAGAGTTAGCAAGACTTGT 58.554 34.615 16.39 6.33 0.00 3.16
3056 4819 1.886542 GCCCTGTTTGTGGAAAGGTAG 59.113 52.381 0.00 0.00 0.00 3.18
3168 4931 4.448210 TCTACTTTGGAACAGTGTTGACC 58.552 43.478 14.57 10.02 42.39 4.02
3195 4958 2.233431 GGACATGCCTTGGCATTTTACA 59.767 45.455 22.97 0.00 33.62 2.41
3231 4994 6.079424 TGTATTTCTGTGTTTTAGTTGGGC 57.921 37.500 0.00 0.00 0.00 5.36
3700 5475 5.830991 ACAACACTAATTTTAGGAAGTGCCA 59.169 36.000 4.12 0.00 42.44 4.92
3719 5494 9.821240 AAGTGCCATATCATAAATATGGGTAAA 57.179 29.630 20.26 0.00 46.91 2.01
4094 5874 4.893424 TTTGTTGTTCAGTAAGCTGGTC 57.107 40.909 0.00 0.00 42.78 4.02
4129 5913 8.988064 TGATGTAGTCAAAAACTCTGATACTC 57.012 34.615 0.00 0.00 39.55 2.59
4130 5914 8.035394 TGATGTAGTCAAAAACTCTGATACTCC 58.965 37.037 0.00 0.00 39.55 3.85
4131 5915 6.698380 TGTAGTCAAAAACTCTGATACTCCC 58.302 40.000 0.00 0.00 39.55 4.30
4132 5916 6.497259 TGTAGTCAAAAACTCTGATACTCCCT 59.503 38.462 0.00 0.00 39.55 4.20
4133 5917 6.043854 AGTCAAAAACTCTGATACTCCCTC 57.956 41.667 0.00 0.00 30.02 4.30
4134 5918 5.046231 AGTCAAAAACTCTGATACTCCCTCC 60.046 44.000 0.00 0.00 30.02 4.30
4135 5919 4.081642 TCAAAAACTCTGATACTCCCTCCG 60.082 45.833 0.00 0.00 0.00 4.63
4136 5920 2.830651 AACTCTGATACTCCCTCCGT 57.169 50.000 0.00 0.00 0.00 4.69
4137 5921 2.830651 ACTCTGATACTCCCTCCGTT 57.169 50.000 0.00 0.00 0.00 4.44
4138 5922 2.657143 ACTCTGATACTCCCTCCGTTC 58.343 52.381 0.00 0.00 0.00 3.95
4139 5923 1.957877 CTCTGATACTCCCTCCGTTCC 59.042 57.143 0.00 0.00 0.00 3.62
4140 5924 1.569548 TCTGATACTCCCTCCGTTCCT 59.430 52.381 0.00 0.00 0.00 3.36
4141 5925 2.781757 TCTGATACTCCCTCCGTTCCTA 59.218 50.000 0.00 0.00 0.00 2.94
4142 5926 3.203710 TCTGATACTCCCTCCGTTCCTAA 59.796 47.826 0.00 0.00 0.00 2.69
4143 5927 3.958798 CTGATACTCCCTCCGTTCCTAAA 59.041 47.826 0.00 0.00 0.00 1.85
4144 5928 4.553678 TGATACTCCCTCCGTTCCTAAAT 58.446 43.478 0.00 0.00 0.00 1.40
4145 5929 5.708544 TGATACTCCCTCCGTTCCTAAATA 58.291 41.667 0.00 0.00 0.00 1.40
4146 5930 6.320518 TGATACTCCCTCCGTTCCTAAATAT 58.679 40.000 0.00 0.00 0.00 1.28
4147 5931 7.472741 TGATACTCCCTCCGTTCCTAAATATA 58.527 38.462 0.00 0.00 0.00 0.86
4148 5932 8.120538 TGATACTCCCTCCGTTCCTAAATATAT 58.879 37.037 0.00 0.00 0.00 0.86
4149 5933 6.854091 ACTCCCTCCGTTCCTAAATATATC 57.146 41.667 0.00 0.00 0.00 1.63
4150 5934 6.563163 ACTCCCTCCGTTCCTAAATATATCT 58.437 40.000 0.00 0.00 0.00 1.98
4151 5935 6.664384 ACTCCCTCCGTTCCTAAATATATCTC 59.336 42.308 0.00 0.00 0.00 2.75
4152 5936 6.801953 TCCCTCCGTTCCTAAATATATCTCT 58.198 40.000 0.00 0.00 0.00 3.10
4153 5937 7.246763 TCCCTCCGTTCCTAAATATATCTCTT 58.753 38.462 0.00 0.00 0.00 2.85
4154 5938 7.733501 TCCCTCCGTTCCTAAATATATCTCTTT 59.266 37.037 0.00 0.00 0.00 2.52
4155 5939 8.035984 CCCTCCGTTCCTAAATATATCTCTTTC 58.964 40.741 0.00 0.00 0.00 2.62
4156 5940 8.808092 CCTCCGTTCCTAAATATATCTCTTTCT 58.192 37.037 0.00 0.00 0.00 2.52
4176 5960 9.877178 TCTTTCTAGAGATTTCAAATGGACTAC 57.123 33.333 0.00 0.00 0.00 2.73
4177 5961 9.103861 CTTTCTAGAGATTTCAAATGGACTACC 57.896 37.037 0.00 0.00 0.00 3.18
4190 5974 3.900971 TGGACTACCACATACGGATGTA 58.099 45.455 14.23 0.00 44.82 2.29
4191 5975 4.476297 TGGACTACCACATACGGATGTAT 58.524 43.478 14.23 7.46 44.82 2.29
4192 5976 5.633117 TGGACTACCACATACGGATGTATA 58.367 41.667 14.23 8.27 44.82 1.47
4193 5977 6.250711 TGGACTACCACATACGGATGTATAT 58.749 40.000 14.23 4.37 44.82 0.86
4194 5978 7.404481 TGGACTACCACATACGGATGTATATA 58.596 38.462 14.23 5.36 44.82 0.86
4195 5979 7.555195 TGGACTACCACATACGGATGTATATAG 59.445 40.741 14.23 16.35 44.82 1.31
4196 5980 7.772292 GGACTACCACATACGGATGTATATAGA 59.228 40.741 22.62 5.04 44.82 1.98
4197 5981 8.503458 ACTACCACATACGGATGTATATAGAC 57.497 38.462 22.62 0.00 44.82 2.59
4198 5982 8.105197 ACTACCACATACGGATGTATATAGACA 58.895 37.037 22.62 2.07 44.82 3.41
4199 5983 7.956328 ACCACATACGGATGTATATAGACAT 57.044 36.000 14.23 12.70 44.82 3.06
4201 5985 9.642343 ACCACATACGGATGTATATAGACATAT 57.358 33.333 14.23 5.08 44.82 1.78
4230 6014 7.440523 AGTGTAGATTCACTCATTTTGTTCC 57.559 36.000 0.00 0.00 44.07 3.62
4231 6015 6.147821 AGTGTAGATTCACTCATTTTGTTCCG 59.852 38.462 0.00 0.00 44.07 4.30
4232 6016 5.995282 TGTAGATTCACTCATTTTGTTCCGT 59.005 36.000 0.00 0.00 0.00 4.69
4233 6017 7.117236 GTGTAGATTCACTCATTTTGTTCCGTA 59.883 37.037 0.00 0.00 35.68 4.02
4234 6018 7.822334 TGTAGATTCACTCATTTTGTTCCGTAT 59.178 33.333 0.00 0.00 0.00 3.06
4235 6019 7.076842 AGATTCACTCATTTTGTTCCGTATG 57.923 36.000 0.00 0.00 0.00 2.39
4236 6020 6.655003 AGATTCACTCATTTTGTTCCGTATGT 59.345 34.615 0.00 0.00 0.00 2.29
4237 6021 7.822334 AGATTCACTCATTTTGTTCCGTATGTA 59.178 33.333 0.00 0.00 0.00 2.29
4238 6022 6.961359 TCACTCATTTTGTTCCGTATGTAG 57.039 37.500 0.00 0.00 0.00 2.74
4239 6023 6.460781 TCACTCATTTTGTTCCGTATGTAGT 58.539 36.000 0.00 0.00 0.00 2.73
4240 6024 6.588756 TCACTCATTTTGTTCCGTATGTAGTC 59.411 38.462 0.00 0.00 0.00 2.59
4241 6025 6.367695 CACTCATTTTGTTCCGTATGTAGTCA 59.632 38.462 0.00 0.00 0.00 3.41
4242 6026 6.367969 ACTCATTTTGTTCCGTATGTAGTCAC 59.632 38.462 0.00 0.00 0.00 3.67
4243 6027 6.460781 TCATTTTGTTCCGTATGTAGTCACT 58.539 36.000 0.00 0.00 0.00 3.41
4244 6028 6.932400 TCATTTTGTTCCGTATGTAGTCACTT 59.068 34.615 0.00 0.00 0.00 3.16
4245 6029 6.533819 TTTTGTTCCGTATGTAGTCACTTG 57.466 37.500 0.00 0.00 0.00 3.16
4246 6030 4.859304 TGTTCCGTATGTAGTCACTTGT 57.141 40.909 0.00 0.00 0.00 3.16
4247 6031 5.204409 TGTTCCGTATGTAGTCACTTGTT 57.796 39.130 0.00 0.00 0.00 2.83
4248 6032 4.986034 TGTTCCGTATGTAGTCACTTGTTG 59.014 41.667 0.00 0.00 0.00 3.33
4249 6033 5.221283 TGTTCCGTATGTAGTCACTTGTTGA 60.221 40.000 0.00 0.00 0.00 3.18
4250 6034 5.456548 TCCGTATGTAGTCACTTGTTGAA 57.543 39.130 0.00 0.00 35.39 2.69
4251 6035 5.845103 TCCGTATGTAGTCACTTGTTGAAA 58.155 37.500 0.00 0.00 35.39 2.69
4252 6036 6.460781 TCCGTATGTAGTCACTTGTTGAAAT 58.539 36.000 0.00 0.00 35.39 2.17
4253 6037 7.604549 TCCGTATGTAGTCACTTGTTGAAATA 58.395 34.615 0.00 0.00 35.39 1.40
4254 6038 8.255206 TCCGTATGTAGTCACTTGTTGAAATAT 58.745 33.333 0.00 0.00 35.39 1.28
4255 6039 8.540492 CCGTATGTAGTCACTTGTTGAAATATC 58.460 37.037 0.00 0.00 35.39 1.63
4256 6040 9.302345 CGTATGTAGTCACTTGTTGAAATATCT 57.698 33.333 0.00 0.00 35.39 1.98
4265 6049 9.996554 TCACTTGTTGAAATATCTAGAAAGACA 57.003 29.630 0.00 0.00 33.57 3.41
4280 6064 9.595823 TCTAGAAAGACAAATATTTAGGAACGG 57.404 33.333 0.00 0.00 0.00 4.44
4281 6065 9.595823 CTAGAAAGACAAATATTTAGGAACGGA 57.404 33.333 0.00 0.00 0.00 4.69
4282 6066 8.494016 AGAAAGACAAATATTTAGGAACGGAG 57.506 34.615 0.00 0.00 0.00 4.63
4283 6067 7.553044 AGAAAGACAAATATTTAGGAACGGAGG 59.447 37.037 0.00 0.00 0.00 4.30
4284 6068 5.681639 AGACAAATATTTAGGAACGGAGGG 58.318 41.667 0.00 0.00 0.00 4.30
4285 6069 5.427481 AGACAAATATTTAGGAACGGAGGGA 59.573 40.000 0.00 0.00 0.00 4.20
4286 6070 5.681639 ACAAATATTTAGGAACGGAGGGAG 58.318 41.667 0.00 0.00 0.00 4.30
4287 6071 4.353383 AATATTTAGGAACGGAGGGAGC 57.647 45.455 0.00 0.00 0.00 4.70
4335 6119 6.978343 TCTATTTCACTGTATGTTTTCCCG 57.022 37.500 0.00 0.00 0.00 5.14
4700 6484 0.391793 GTCACTGGGAGCCTGTAAGC 60.392 60.000 0.00 0.00 33.97 3.09
4763 6547 6.361433 TGGTTCTGTGGAAATCTCTTGTTTA 58.639 36.000 0.00 0.00 32.81 2.01
4779 6563 9.817809 TCTCTTGTTTATTGCTATAGTGTTAGG 57.182 33.333 0.84 0.00 0.00 2.69
4832 6616 4.398358 CCGTCCAGTAGATTACTTCAGACA 59.602 45.833 9.58 0.00 36.76 3.41
4914 6698 2.732094 GGACCACGAACGTGTCCG 60.732 66.667 22.38 12.06 44.02 4.79
4915 6699 2.332514 GACCACGAACGTGTCCGA 59.667 61.111 22.38 0.00 44.02 4.55
4928 6736 3.961414 TCCGACACCCAAAGCCCC 61.961 66.667 0.00 0.00 0.00 5.80
4998 7241 1.542108 GCAGGGCGATCTCTTATTGCT 60.542 52.381 0.00 0.00 0.00 3.91
5029 7272 4.488136 CAGCGTGCAGGGGCCATA 62.488 66.667 4.39 0.00 40.13 2.74
5030 7273 4.181010 AGCGTGCAGGGGCCATAG 62.181 66.667 4.39 0.00 40.13 2.23
5031 7274 4.489771 GCGTGCAGGGGCCATAGT 62.490 66.667 4.39 0.00 40.13 2.12
5032 7275 2.203070 CGTGCAGGGGCCATAGTC 60.203 66.667 4.39 0.00 40.13 2.59
5033 7276 2.998097 GTGCAGGGGCCATAGTCA 59.002 61.111 4.39 0.00 40.13 3.41
5034 7277 1.533711 GTGCAGGGGCCATAGTCAT 59.466 57.895 4.39 0.00 40.13 3.06
5054 7297 2.035626 CCGGCCCAAAGTGGATGT 59.964 61.111 0.00 0.00 40.96 3.06
5060 7303 1.823250 GCCCAAAGTGGATGTGACCTT 60.823 52.381 0.00 0.00 40.96 3.50
5107 7350 2.517875 GCCGAGAGCATTGCCCAT 60.518 61.111 4.70 0.00 42.97 4.00
5126 7369 1.734117 GCTGGTTTTCGGTGCATGC 60.734 57.895 11.82 11.82 0.00 4.06
5128 7371 2.804931 GGTTTTCGGTGCATGCGC 60.805 61.111 23.05 23.05 39.24 6.09
5136 7381 3.558411 GTGCATGCGCCGTCTCTC 61.558 66.667 20.70 0.00 37.32 3.20
5185 7430 4.709604 AACCTACTCCGCCCCCGT 62.710 66.667 0.00 0.00 0.00 5.28
5200 7445 1.325355 CCCGTATATGACCGTCACCT 58.675 55.000 2.57 0.00 0.00 4.00
5216 7461 1.442184 CCTGTTCGTCCGTCTGTCG 60.442 63.158 0.00 0.00 39.52 4.35
5234 7479 2.601562 GACCACTGTCGGTGTCAAC 58.398 57.895 10.90 0.00 43.94 3.18
5273 7518 0.979187 GGGGTCCCGAGTTGTGGATA 60.979 60.000 0.48 0.00 32.20 2.59
5437 7683 2.917205 AGCTAAACCCTAGGTTGAGGT 58.083 47.619 8.29 9.37 46.57 3.85
5473 7719 6.561519 TGCTCTAGCCCTAAAGACTAAAAT 57.438 37.500 0.00 0.00 41.18 1.82
5495 7741 8.762481 AAATCCTTTGGTTTATATAGACACCC 57.238 34.615 5.83 0.00 0.00 4.61
5496 7742 7.707467 ATCCTTTGGTTTATATAGACACCCT 57.293 36.000 5.83 0.00 0.00 4.34
5497 7743 8.808240 ATCCTTTGGTTTATATAGACACCCTA 57.192 34.615 5.83 0.00 0.00 3.53
5498 7744 8.026396 TCCTTTGGTTTATATAGACACCCTAC 57.974 38.462 5.83 0.00 0.00 3.18
5499 7745 7.847848 TCCTTTGGTTTATATAGACACCCTACT 59.152 37.037 5.83 0.00 0.00 2.57
5533 7779 2.872245 CAGGCGATCGGTTACAATGAAT 59.128 45.455 18.30 0.00 0.00 2.57
5542 7788 7.042456 CGATCGGTTACAATGAATGAAAGATCT 60.042 37.037 7.38 0.00 0.00 2.75
5683 7929 0.927029 GGCCTGAGGACCCCTTAATT 59.073 55.000 0.65 0.00 31.76 1.40
5696 7942 3.372025 CCCCTTAATTCAGGACTCCCTTG 60.372 52.174 7.28 0.00 42.02 3.61
5717 7963 0.637195 TAGCCCCTGAACTAGCCTCT 59.363 55.000 0.00 0.00 0.00 3.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.911378 TTTTGCCATATGAACATAGCACA 57.089 34.783 3.65 0.00 28.33 4.57
1 2 7.040478 TCCTATTTTGCCATATGAACATAGCAC 60.040 37.037 3.65 0.00 28.33 4.40
2 3 7.003482 TCCTATTTTGCCATATGAACATAGCA 58.997 34.615 3.65 0.80 0.00 3.49
6 7 9.603921 CTTTTTCCTATTTTGCCATATGAACAT 57.396 29.630 3.65 0.00 0.00 2.71
8 9 9.822185 ATCTTTTTCCTATTTTGCCATATGAAC 57.178 29.630 3.65 0.00 0.00 3.18
10 11 9.820725 CAATCTTTTTCCTATTTTGCCATATGA 57.179 29.630 3.65 0.00 0.00 2.15
11 12 9.820725 TCAATCTTTTTCCTATTTTGCCATATG 57.179 29.630 0.00 0.00 0.00 1.78
15 16 9.034800 ACTATCAATCTTTTTCCTATTTTGCCA 57.965 29.630 0.00 0.00 0.00 4.92
16 17 9.875691 AACTATCAATCTTTTTCCTATTTTGCC 57.124 29.630 0.00 0.00 0.00 4.52
24 25 9.579932 AGAGACAAAACTATCAATCTTTTTCCT 57.420 29.630 0.00 0.00 0.00 3.36
39 40 8.131731 GCTGTTGAAATTTCTAGAGACAAAACT 58.868 33.333 24.12 0.00 0.00 2.66
40 41 8.131731 AGCTGTTGAAATTTCTAGAGACAAAAC 58.868 33.333 24.12 14.83 0.00 2.43
41 42 8.225603 AGCTGTTGAAATTTCTAGAGACAAAA 57.774 30.769 24.12 4.74 0.00 2.44
42 43 7.498900 TGAGCTGTTGAAATTTCTAGAGACAAA 59.501 33.333 24.12 5.36 0.00 2.83
43 44 6.992123 TGAGCTGTTGAAATTTCTAGAGACAA 59.008 34.615 24.12 9.91 0.00 3.18
44 45 6.425114 GTGAGCTGTTGAAATTTCTAGAGACA 59.575 38.462 24.12 19.53 0.00 3.41
45 46 6.425114 TGTGAGCTGTTGAAATTTCTAGAGAC 59.575 38.462 24.12 17.85 0.00 3.36
46 47 6.524734 TGTGAGCTGTTGAAATTTCTAGAGA 58.475 36.000 24.12 6.73 0.00 3.10
47 48 6.791887 TGTGAGCTGTTGAAATTTCTAGAG 57.208 37.500 18.64 18.43 0.00 2.43
48 49 7.566760 TTTGTGAGCTGTTGAAATTTCTAGA 57.433 32.000 18.64 9.26 0.00 2.43
49 50 8.077991 TCATTTGTGAGCTGTTGAAATTTCTAG 58.922 33.333 18.64 14.26 0.00 2.43
50 51 7.862372 GTCATTTGTGAGCTGTTGAAATTTCTA 59.138 33.333 18.64 8.95 0.00 2.10
51 52 6.698766 GTCATTTGTGAGCTGTTGAAATTTCT 59.301 34.615 18.64 0.00 0.00 2.52
52 53 6.476380 TGTCATTTGTGAGCTGTTGAAATTTC 59.524 34.615 11.41 11.41 0.00 2.17
53 54 6.339730 TGTCATTTGTGAGCTGTTGAAATTT 58.660 32.000 0.00 0.00 0.00 1.82
54 55 5.904941 TGTCATTTGTGAGCTGTTGAAATT 58.095 33.333 0.00 0.00 0.00 1.82
55 56 5.518848 TGTCATTTGTGAGCTGTTGAAAT 57.481 34.783 0.00 0.00 0.00 2.17
56 57 4.979943 TGTCATTTGTGAGCTGTTGAAA 57.020 36.364 0.00 0.00 0.00 2.69
57 58 4.319694 CGATGTCATTTGTGAGCTGTTGAA 60.320 41.667 0.00 0.00 0.00 2.69
58 59 3.187022 CGATGTCATTTGTGAGCTGTTGA 59.813 43.478 0.00 0.00 0.00 3.18
59 60 3.485633 CGATGTCATTTGTGAGCTGTTG 58.514 45.455 0.00 0.00 0.00 3.33
60 61 2.095567 GCGATGTCATTTGTGAGCTGTT 60.096 45.455 0.00 0.00 0.00 3.16
61 62 1.466167 GCGATGTCATTTGTGAGCTGT 59.534 47.619 0.00 0.00 0.00 4.40
62 63 1.202110 GGCGATGTCATTTGTGAGCTG 60.202 52.381 0.00 0.00 0.00 4.24
63 64 1.089920 GGCGATGTCATTTGTGAGCT 58.910 50.000 0.00 0.00 0.00 4.09
64 65 0.099436 GGGCGATGTCATTTGTGAGC 59.901 55.000 0.00 0.00 0.00 4.26
65 66 0.734889 GGGGCGATGTCATTTGTGAG 59.265 55.000 0.00 0.00 0.00 3.51
66 67 0.679640 GGGGGCGATGTCATTTGTGA 60.680 55.000 0.00 0.00 0.00 3.58
67 68 0.680921 AGGGGGCGATGTCATTTGTG 60.681 55.000 0.00 0.00 0.00 3.33
68 69 0.039618 AAGGGGGCGATGTCATTTGT 59.960 50.000 0.00 0.00 0.00 2.83
69 70 1.949525 CTAAGGGGGCGATGTCATTTG 59.050 52.381 0.00 0.00 0.00 2.32
70 71 1.133792 CCTAAGGGGGCGATGTCATTT 60.134 52.381 0.00 0.00 0.00 2.32
71 72 0.474184 CCTAAGGGGGCGATGTCATT 59.526 55.000 0.00 0.00 0.00 2.57
72 73 2.056906 GCCTAAGGGGGCGATGTCAT 62.057 60.000 0.00 0.00 42.82 3.06
73 74 2.742116 GCCTAAGGGGGCGATGTCA 61.742 63.158 0.00 0.00 42.82 3.58
74 75 2.111251 GCCTAAGGGGGCGATGTC 59.889 66.667 0.00 0.00 42.82 3.06
81 82 0.106918 TTAACATGCGCCTAAGGGGG 60.107 55.000 4.18 4.68 46.78 5.40
82 83 1.676006 CTTTAACATGCGCCTAAGGGG 59.324 52.381 4.18 0.00 38.76 4.79
83 84 2.639065 TCTTTAACATGCGCCTAAGGG 58.361 47.619 4.18 0.00 0.00 3.95
84 85 3.485216 CGTTCTTTAACATGCGCCTAAGG 60.485 47.826 4.18 0.00 35.16 2.69
85 86 3.670203 CGTTCTTTAACATGCGCCTAAG 58.330 45.455 4.18 0.00 35.16 2.18
86 87 2.159626 GCGTTCTTTAACATGCGCCTAA 60.160 45.455 4.18 0.00 39.11 2.69
87 88 1.395608 GCGTTCTTTAACATGCGCCTA 59.604 47.619 4.18 0.00 39.11 3.93
88 89 0.168128 GCGTTCTTTAACATGCGCCT 59.832 50.000 4.18 0.00 39.11 5.52
89 90 2.637155 GCGTTCTTTAACATGCGCC 58.363 52.632 4.18 0.00 39.11 6.53
90 91 0.109964 TGGCGTTCTTTAACATGCGC 60.110 50.000 0.00 0.00 43.46 6.09
91 92 1.196808 AGTGGCGTTCTTTAACATGCG 59.803 47.619 0.00 0.00 35.16 4.73
92 93 2.989422 AGTGGCGTTCTTTAACATGC 57.011 45.000 0.00 0.00 35.16 4.06
93 94 8.394877 TGATATTTAGTGGCGTTCTTTAACATG 58.605 33.333 0.00 0.00 35.16 3.21
94 95 8.500753 TGATATTTAGTGGCGTTCTTTAACAT 57.499 30.769 0.00 0.00 35.16 2.71
95 96 7.908827 TGATATTTAGTGGCGTTCTTTAACA 57.091 32.000 0.00 0.00 35.16 2.41
98 99 9.826574 AGTAATGATATTTAGTGGCGTTCTTTA 57.173 29.630 0.00 0.00 0.00 1.85
99 100 8.612619 CAGTAATGATATTTAGTGGCGTTCTTT 58.387 33.333 0.00 0.00 31.61 2.52
100 101 7.769044 ACAGTAATGATATTTAGTGGCGTTCTT 59.231 33.333 0.00 0.00 37.00 2.52
101 102 7.272978 ACAGTAATGATATTTAGTGGCGTTCT 58.727 34.615 0.00 0.00 37.00 3.01
102 103 7.223971 TGACAGTAATGATATTTAGTGGCGTTC 59.776 37.037 0.00 0.00 41.53 3.95
103 104 7.045416 TGACAGTAATGATATTTAGTGGCGTT 58.955 34.615 0.00 0.00 41.53 4.84
104 105 6.578944 TGACAGTAATGATATTTAGTGGCGT 58.421 36.000 0.00 0.00 41.53 5.68
105 106 6.346919 GCTGACAGTAATGATATTTAGTGGCG 60.347 42.308 3.99 2.97 41.53 5.69
106 107 6.708054 AGCTGACAGTAATGATATTTAGTGGC 59.292 38.462 3.99 4.59 39.84 5.01
107 108 7.928167 TGAGCTGACAGTAATGATATTTAGTGG 59.072 37.037 3.99 0.00 37.00 4.00
115 116 6.479990 CGGATTTTGAGCTGACAGTAATGATA 59.520 38.462 3.99 0.00 0.00 2.15
117 118 4.631377 CGGATTTTGAGCTGACAGTAATGA 59.369 41.667 3.99 0.00 0.00 2.57
123 124 2.807967 TCAACGGATTTTGAGCTGACAG 59.192 45.455 0.00 0.00 31.68 3.51
127 128 6.479990 TGATATAGTCAACGGATTTTGAGCTG 59.520 38.462 0.00 0.00 36.15 4.24
150 151 9.349713 GGTCCACAGATATTTTGGTTATTATGA 57.650 33.333 0.00 0.00 0.00 2.15
161 162 6.009589 TGACATGTTGGTCCACAGATATTTT 58.990 36.000 0.00 0.00 36.97 1.82
167 168 1.543208 GCTGACATGTTGGTCCACAGA 60.543 52.381 11.47 0.00 36.97 3.41
169 170 0.473755 AGCTGACATGTTGGTCCACA 59.526 50.000 0.00 0.00 36.97 4.17
184 185 2.109774 AGTGAGATGGAAGGAGAGCTG 58.890 52.381 0.00 0.00 0.00 4.24
191 192 7.222872 AGCTTTTATCATAGTGAGATGGAAGG 58.777 38.462 0.00 0.00 0.00 3.46
193 194 9.770097 CTAAGCTTTTATCATAGTGAGATGGAA 57.230 33.333 3.20 0.00 0.00 3.53
196 197 9.202273 GACCTAAGCTTTTATCATAGTGAGATG 57.798 37.037 3.20 0.00 0.00 2.90
213 214 1.819903 GAACCGAGTGAGACCTAAGCT 59.180 52.381 0.00 0.00 0.00 3.74
265 266 5.417580 AGTTGTCAGGAGTAAGCAAACAAAA 59.582 36.000 0.00 0.00 0.00 2.44
288 289 8.642432 TCTCATAATAATAAGTGTGGGTCTCAG 58.358 37.037 0.00 0.00 0.00 3.35
293 294 8.319057 TCTGTCTCATAATAATAAGTGTGGGT 57.681 34.615 0.00 0.00 0.00 4.51
305 306 6.663734 TGTCAGGTCTCTCTGTCTCATAATA 58.336 40.000 0.00 0.00 36.25 0.98
309 310 3.448093 TGTCAGGTCTCTCTGTCTCAT 57.552 47.619 0.00 0.00 36.25 2.90
323 324 0.251354 CTCTGGACCCACATGTCAGG 59.749 60.000 9.48 9.48 36.97 3.86
327 328 5.195940 CAAAATATCTCTGGACCCACATGT 58.804 41.667 0.00 0.00 0.00 3.21
333 334 4.503714 TGACCAAAATATCTCTGGACCC 57.496 45.455 5.03 0.00 34.16 4.46
401 402 2.394632 ACACTGACACTGGTAGGTCAA 58.605 47.619 0.00 0.00 42.91 3.18
408 409 5.755409 TCCAATTATACACTGACACTGGT 57.245 39.130 0.00 0.00 0.00 4.00
412 413 7.698130 GCTCAAAATCCAATTATACACTGACAC 59.302 37.037 0.00 0.00 0.00 3.67
474 475 3.670055 CGTTTGCTCAAAAGTGCCATTAG 59.330 43.478 0.00 0.00 31.33 1.73
501 502 7.974675 ACTCGTCAAAAATATCATCGTTTCAT 58.025 30.769 0.00 0.00 0.00 2.57
502 503 7.359262 ACTCGTCAAAAATATCATCGTTTCA 57.641 32.000 0.00 0.00 0.00 2.69
503 504 9.916397 ATAACTCGTCAAAAATATCATCGTTTC 57.084 29.630 0.00 0.00 0.00 2.78
516 517 9.493206 GTCAGTTTTGTTTATAACTCGTCAAAA 57.507 29.630 0.00 0.00 32.50 2.44
519 520 9.701098 ATAGTCAGTTTTGTTTATAACTCGTCA 57.299 29.630 0.00 0.00 32.50 4.35
521 522 8.857216 CGATAGTCAGTTTTGTTTATAACTCGT 58.143 33.333 0.00 0.00 32.50 4.18
522 523 8.318876 CCGATAGTCAGTTTTGTTTATAACTCG 58.681 37.037 0.00 0.00 32.50 4.18
524 525 9.715121 TTCCGATAGTCAGTTTTGTTTATAACT 57.285 29.630 0.00 0.00 35.06 2.24
525 526 9.750882 GTTCCGATAGTCAGTTTTGTTTATAAC 57.249 33.333 0.00 0.00 0.00 1.89
526 527 8.649841 CGTTCCGATAGTCAGTTTTGTTTATAA 58.350 33.333 0.00 0.00 0.00 0.98
545 1509 7.225011 AGATATAGATATAGATGCCGTTCCGA 58.775 38.462 0.00 0.00 0.00 4.55
578 1542 9.131791 GCCCCTTTGAGTCTTTTTATATTGATA 57.868 33.333 0.00 0.00 0.00 2.15
579 1543 7.619302 TGCCCCTTTGAGTCTTTTTATATTGAT 59.381 33.333 0.00 0.00 0.00 2.57
580 1544 6.951198 TGCCCCTTTGAGTCTTTTTATATTGA 59.049 34.615 0.00 0.00 0.00 2.57
581 1545 7.122650 TCTGCCCCTTTGAGTCTTTTTATATTG 59.877 37.037 0.00 0.00 0.00 1.90
582 1546 7.182060 TCTGCCCCTTTGAGTCTTTTTATATT 58.818 34.615 0.00 0.00 0.00 1.28
583 1547 6.731467 TCTGCCCCTTTGAGTCTTTTTATAT 58.269 36.000 0.00 0.00 0.00 0.86
584 1548 6.134535 TCTGCCCCTTTGAGTCTTTTTATA 57.865 37.500 0.00 0.00 0.00 0.98
585 1549 4.998051 TCTGCCCCTTTGAGTCTTTTTAT 58.002 39.130 0.00 0.00 0.00 1.40
586 1550 4.447138 TCTGCCCCTTTGAGTCTTTTTA 57.553 40.909 0.00 0.00 0.00 1.52
587 1551 3.312736 TCTGCCCCTTTGAGTCTTTTT 57.687 42.857 0.00 0.00 0.00 1.94
588 1552 3.532641 ATCTGCCCCTTTGAGTCTTTT 57.467 42.857 0.00 0.00 0.00 2.27
589 1553 3.181429 TGAATCTGCCCCTTTGAGTCTTT 60.181 43.478 0.00 0.00 0.00 2.52
590 1554 2.376518 TGAATCTGCCCCTTTGAGTCTT 59.623 45.455 0.00 0.00 0.00 3.01
591 1555 1.988107 TGAATCTGCCCCTTTGAGTCT 59.012 47.619 0.00 0.00 0.00 3.24
592 1556 2.489722 GTTGAATCTGCCCCTTTGAGTC 59.510 50.000 0.00 0.00 0.00 3.36
593 1557 2.158475 TGTTGAATCTGCCCCTTTGAGT 60.158 45.455 0.00 0.00 0.00 3.41
594 1558 2.517959 TGTTGAATCTGCCCCTTTGAG 58.482 47.619 0.00 0.00 0.00 3.02
595 1559 2.673775 TGTTGAATCTGCCCCTTTGA 57.326 45.000 0.00 0.00 0.00 2.69
596 1560 3.749665 TTTGTTGAATCTGCCCCTTTG 57.250 42.857 0.00 0.00 0.00 2.77
597 1561 3.261643 GGATTTGTTGAATCTGCCCCTTT 59.738 43.478 0.00 0.00 43.08 3.11
598 1562 2.833943 GGATTTGTTGAATCTGCCCCTT 59.166 45.455 0.00 0.00 43.08 3.95
599 1563 2.460669 GGATTTGTTGAATCTGCCCCT 58.539 47.619 0.00 0.00 43.08 4.79
600 1564 1.482182 GGGATTTGTTGAATCTGCCCC 59.518 52.381 0.00 0.00 43.08 5.80
601 1565 1.134946 CGGGATTTGTTGAATCTGCCC 59.865 52.381 0.00 0.00 43.08 5.36
602 1566 2.091541 TCGGGATTTGTTGAATCTGCC 58.908 47.619 0.00 0.00 43.08 4.85
603 1567 2.159379 GGTCGGGATTTGTTGAATCTGC 60.159 50.000 0.00 0.00 43.08 4.26
604 1568 2.095853 CGGTCGGGATTTGTTGAATCTG 59.904 50.000 0.00 0.00 43.08 2.90
605 1569 2.290071 ACGGTCGGGATTTGTTGAATCT 60.290 45.455 0.00 0.00 43.08 2.40
606 1570 2.081462 ACGGTCGGGATTTGTTGAATC 58.919 47.619 0.00 0.00 42.84 2.52
607 1571 2.081462 GACGGTCGGGATTTGTTGAAT 58.919 47.619 0.00 0.00 0.00 2.57
608 1572 1.202663 TGACGGTCGGGATTTGTTGAA 60.203 47.619 3.34 0.00 0.00 2.69
609 1573 0.393448 TGACGGTCGGGATTTGTTGA 59.607 50.000 3.34 0.00 0.00 3.18
610 1574 1.231221 TTGACGGTCGGGATTTGTTG 58.769 50.000 3.34 0.00 0.00 3.33
611 1575 1.970092 TTTGACGGTCGGGATTTGTT 58.030 45.000 3.34 0.00 0.00 2.83
612 1576 2.081462 GATTTGACGGTCGGGATTTGT 58.919 47.619 3.34 0.00 0.00 2.83
613 1577 2.080693 TGATTTGACGGTCGGGATTTG 58.919 47.619 3.34 0.00 0.00 2.32
614 1578 2.356135 CTGATTTGACGGTCGGGATTT 58.644 47.619 3.34 0.00 0.00 2.17
615 1579 1.406887 CCTGATTTGACGGTCGGGATT 60.407 52.381 3.34 0.00 42.38 3.01
616 1580 0.178068 CCTGATTTGACGGTCGGGAT 59.822 55.000 3.34 0.00 42.38 3.85
617 1581 1.189524 ACCTGATTTGACGGTCGGGA 61.190 55.000 7.20 0.00 42.38 5.14
618 1582 0.739813 GACCTGATTTGACGGTCGGG 60.740 60.000 3.34 0.00 44.75 5.14
619 1583 2.750815 GACCTGATTTGACGGTCGG 58.249 57.895 3.34 0.00 38.00 4.79
621 1585 2.678336 GGATTGACCTGATTTGACGGTC 59.322 50.000 0.00 0.00 45.76 4.79
622 1586 2.039746 TGGATTGACCTGATTTGACGGT 59.960 45.455 0.00 0.00 39.86 4.83
623 1587 2.710377 TGGATTGACCTGATTTGACGG 58.290 47.619 0.00 0.00 39.86 4.79
624 1588 3.501828 TGTTGGATTGACCTGATTTGACG 59.498 43.478 0.00 0.00 39.86 4.35
625 1589 5.010012 AGTTGTTGGATTGACCTGATTTGAC 59.990 40.000 0.00 0.00 39.86 3.18
626 1590 5.139727 AGTTGTTGGATTGACCTGATTTGA 58.860 37.500 0.00 0.00 39.86 2.69
627 1591 5.009911 TGAGTTGTTGGATTGACCTGATTTG 59.990 40.000 0.00 0.00 39.86 2.32
628 1592 5.139727 TGAGTTGTTGGATTGACCTGATTT 58.860 37.500 0.00 0.00 39.86 2.17
629 1593 4.728772 TGAGTTGTTGGATTGACCTGATT 58.271 39.130 0.00 0.00 39.86 2.57
630 1594 4.371624 TGAGTTGTTGGATTGACCTGAT 57.628 40.909 0.00 0.00 39.86 2.90
631 1595 3.855255 TGAGTTGTTGGATTGACCTGA 57.145 42.857 0.00 0.00 39.86 3.86
632 1596 3.366679 GCATGAGTTGTTGGATTGACCTG 60.367 47.826 0.00 0.00 39.86 4.00
633 1597 2.821969 GCATGAGTTGTTGGATTGACCT 59.178 45.455 0.00 0.00 39.86 3.85
634 1598 2.821969 AGCATGAGTTGTTGGATTGACC 59.178 45.455 0.00 0.00 39.54 4.02
635 1599 4.697352 AGTAGCATGAGTTGTTGGATTGAC 59.303 41.667 0.00 0.00 0.00 3.18
636 1600 4.910195 AGTAGCATGAGTTGTTGGATTGA 58.090 39.130 0.00 0.00 0.00 2.57
637 1601 4.095483 GGAGTAGCATGAGTTGTTGGATTG 59.905 45.833 0.00 0.00 0.00 2.67
638 1602 4.263462 TGGAGTAGCATGAGTTGTTGGATT 60.263 41.667 0.00 0.00 0.00 3.01
639 1603 3.264193 TGGAGTAGCATGAGTTGTTGGAT 59.736 43.478 0.00 0.00 0.00 3.41
640 1604 2.637382 TGGAGTAGCATGAGTTGTTGGA 59.363 45.455 0.00 0.00 0.00 3.53
641 1605 3.057969 TGGAGTAGCATGAGTTGTTGG 57.942 47.619 0.00 0.00 0.00 3.77
642 1606 4.142534 CCATTGGAGTAGCATGAGTTGTTG 60.143 45.833 0.00 0.00 0.00 3.33
643 1607 4.012374 CCATTGGAGTAGCATGAGTTGTT 58.988 43.478 0.00 0.00 0.00 2.83
644 1608 3.009473 ACCATTGGAGTAGCATGAGTTGT 59.991 43.478 10.37 0.00 0.00 3.32
645 1609 3.376234 CACCATTGGAGTAGCATGAGTTG 59.624 47.826 10.37 0.00 0.00 3.16
646 1610 3.264193 TCACCATTGGAGTAGCATGAGTT 59.736 43.478 10.37 0.00 0.00 3.01
647 1611 2.840038 TCACCATTGGAGTAGCATGAGT 59.160 45.455 10.37 0.00 0.00 3.41
648 1612 3.464907 CTCACCATTGGAGTAGCATGAG 58.535 50.000 10.37 6.28 0.00 2.90
649 1613 2.420547 GCTCACCATTGGAGTAGCATGA 60.421 50.000 10.37 0.00 34.83 3.07
650 1614 1.945394 GCTCACCATTGGAGTAGCATG 59.055 52.381 10.37 0.00 34.83 4.06
651 1615 1.473965 CGCTCACCATTGGAGTAGCAT 60.474 52.381 10.37 0.00 34.83 3.79
652 1616 0.108186 CGCTCACCATTGGAGTAGCA 60.108 55.000 10.37 0.00 34.83 3.49
653 1617 1.432270 GCGCTCACCATTGGAGTAGC 61.432 60.000 10.37 13.09 34.83 3.58
654 1618 0.176680 AGCGCTCACCATTGGAGTAG 59.823 55.000 2.64 4.65 34.83 2.57
655 1619 0.175760 GAGCGCTCACCATTGGAGTA 59.824 55.000 31.91 0.00 34.83 2.59
656 1620 1.078848 GAGCGCTCACCATTGGAGT 60.079 57.895 31.91 0.00 34.83 3.85
657 1621 0.674581 TTGAGCGCTCACCATTGGAG 60.675 55.000 38.36 0.83 39.66 3.86
658 1622 0.955428 GTTGAGCGCTCACCATTGGA 60.955 55.000 38.36 20.24 39.66 3.53
659 1623 1.236616 TGTTGAGCGCTCACCATTGG 61.237 55.000 38.36 0.00 39.66 3.16
660 1624 0.806868 ATGTTGAGCGCTCACCATTG 59.193 50.000 36.06 0.00 39.25 2.82
661 1625 0.806868 CATGTTGAGCGCTCACCATT 59.193 50.000 38.20 24.59 39.25 3.16
662 1626 0.321919 ACATGTTGAGCGCTCACCAT 60.322 50.000 36.06 36.06 42.33 3.55
663 1627 0.534877 AACATGTTGAGCGCTCACCA 60.535 50.000 38.36 36.62 39.66 4.17
664 1628 0.593128 AAACATGTTGAGCGCTCACC 59.407 50.000 38.36 32.16 39.66 4.02
665 1629 2.480419 AGTAAACATGTTGAGCGCTCAC 59.520 45.455 38.36 29.97 39.66 3.51
666 1630 2.480037 CAGTAAACATGTTGAGCGCTCA 59.520 45.455 35.30 35.30 37.91 4.26
667 1631 2.480419 ACAGTAAACATGTTGAGCGCTC 59.520 45.455 30.42 30.42 0.00 5.03
668 1632 2.224079 CACAGTAAACATGTTGAGCGCT 59.776 45.455 11.27 11.27 0.00 5.92
669 1633 2.574322 CACAGTAAACATGTTGAGCGC 58.426 47.619 12.82 0.00 0.00 5.92
670 1634 2.032117 TGCACAGTAAACATGTTGAGCG 60.032 45.455 12.82 4.40 31.16 5.03
671 1635 3.003689 ACTGCACAGTAAACATGTTGAGC 59.996 43.478 12.82 11.00 40.43 4.26
672 1636 4.818534 ACTGCACAGTAAACATGTTGAG 57.181 40.909 12.82 5.16 40.43 3.02
673 1637 6.685527 TTAACTGCACAGTAAACATGTTGA 57.314 33.333 12.82 0.38 41.58 3.18
674 1638 9.277565 GATATTAACTGCACAGTAAACATGTTG 57.722 33.333 12.82 2.41 41.58 3.33
675 1639 9.008965 TGATATTAACTGCACAGTAAACATGTT 57.991 29.630 4.92 4.92 41.58 2.71
676 1640 8.560355 TGATATTAACTGCACAGTAAACATGT 57.440 30.769 3.26 0.00 41.58 3.21
717 1681 7.009440 CGTATTAAGTATGTGATTCGCATTGG 58.991 38.462 17.24 0.00 36.02 3.16
719 1683 7.709269 ACGTATTAAGTATGTGATTCGCATT 57.291 32.000 17.24 4.17 36.02 3.56
721 1685 8.631676 TTTACGTATTAAGTATGTGATTCGCA 57.368 30.769 1.78 1.78 34.43 5.10
782 1825 8.098220 TGCAATGCACGTTGATATTAGATAAT 57.902 30.769 2.72 0.00 31.71 1.28
800 1843 4.654091 AGTAAATGGGTATGTGCAATGC 57.346 40.909 0.00 0.00 0.00 3.56
801 1844 6.942532 AGTAGTAAATGGGTATGTGCAATG 57.057 37.500 0.00 0.00 0.00 2.82
802 1845 7.802117 ACTAGTAGTAAATGGGTATGTGCAAT 58.198 34.615 0.00 0.00 0.00 3.56
804 1847 6.801718 ACTAGTAGTAAATGGGTATGTGCA 57.198 37.500 0.00 0.00 0.00 4.57
845 1888 2.541588 GCGCGCTCCATACATGATTTTT 60.542 45.455 26.67 0.00 0.00 1.94
846 1889 1.002468 GCGCGCTCCATACATGATTTT 60.002 47.619 26.67 0.00 0.00 1.82
847 1890 0.588252 GCGCGCTCCATACATGATTT 59.412 50.000 26.67 0.00 0.00 2.17
850 1893 1.592400 CTGCGCGCTCCATACATGA 60.592 57.895 33.29 6.44 0.00 3.07
851 1894 2.933666 CTGCGCGCTCCATACATG 59.066 61.111 33.29 6.91 0.00 3.21
871 2467 3.406361 CACGCGTCACCACTCAGC 61.406 66.667 9.86 0.00 0.00 4.26
876 2472 3.838795 GATCGCACGCGTCACCAC 61.839 66.667 9.86 0.00 40.74 4.16
878 2474 4.796231 AGGATCGCACGCGTCACC 62.796 66.667 9.86 8.69 40.74 4.02
879 2475 3.545481 CAGGATCGCACGCGTCAC 61.545 66.667 9.86 3.16 40.74 3.67
880 2476 4.794439 CCAGGATCGCACGCGTCA 62.794 66.667 9.86 0.00 40.74 4.35
889 2485 4.530857 GACGGGTGCCCAGGATCG 62.531 72.222 8.14 0.00 35.37 3.69
890 2486 3.391665 CTGACGGGTGCCCAGGATC 62.392 68.421 8.14 0.12 35.37 3.36
1032 2778 3.741476 CTTGGCTTGGAGGCGTGC 61.741 66.667 0.00 0.00 44.78 5.34
1104 2850 0.250295 CTTCAAGGGCGTGAGGAACA 60.250 55.000 0.00 0.00 0.00 3.18
1338 3084 5.639931 CGAGAGAGGATCGATTGTATCAGTA 59.360 44.000 0.00 0.00 42.76 2.74
1347 3093 1.519751 CGGGCGAGAGAGGATCGATT 61.520 60.000 0.00 0.00 42.76 3.34
1439 3185 0.394899 GTAGCAGCAAATCAGCCCCT 60.395 55.000 0.00 0.00 34.23 4.79
1445 3191 4.397420 TCCTCAAAAGTAGCAGCAAATCA 58.603 39.130 0.00 0.00 0.00 2.57
1599 3347 2.029290 TCCTAAACGCACCAGAAGTCTC 60.029 50.000 0.00 0.00 0.00 3.36
1661 3409 2.273908 GGGGACGAGACTTACAGCA 58.726 57.895 0.00 0.00 0.00 4.41
1741 3504 4.909880 GCACTTGGACGTTAAAAGATTGTC 59.090 41.667 11.39 0.00 0.00 3.18
1763 3526 4.574599 AACAGAAAACAGAAGGATGTGC 57.425 40.909 0.00 0.00 32.52 4.57
1836 3599 7.180079 CACATTGTTACCATCGAAATCAGTAC 58.820 38.462 0.00 0.00 0.00 2.73
1883 3646 3.450817 TGAGATAAATCTTGCCCGAGACA 59.549 43.478 0.00 0.00 37.25 3.41
1932 3695 9.355215 CGACAGTAGTGAATTAGATACTTGTTT 57.645 33.333 4.09 0.00 0.00 2.83
1945 3708 3.402628 AACAAGGCGACAGTAGTGAAT 57.597 42.857 4.09 0.00 0.00 2.57
2247 4010 7.388776 TCGAATGAACTTTCAGATGAATCAAGT 59.611 33.333 0.00 0.00 41.08 3.16
2414 4177 2.586258 ACTCATCGTTTCCATCTCCG 57.414 50.000 0.00 0.00 0.00 4.63
2418 4181 3.304559 CGACTGAACTCATCGTTTCCATC 59.695 47.826 0.00 0.00 35.56 3.51
2650 4413 3.557595 ACTCTATGAAACTAATGCGCTGC 59.442 43.478 9.73 0.00 0.00 5.25
2685 4448 8.407064 GCTTATTGTTTCTAGACTGCTCTACTA 58.593 37.037 0.00 0.00 0.00 1.82
2932 4695 9.778741 TTCTCCGAAGTATAATCTGCAATTTAT 57.221 29.630 6.18 6.18 0.00 1.40
3056 4819 3.305403 GGGACAAAGAGCTAAAACCAAGC 60.305 47.826 0.00 0.00 40.40 4.01
3102 4865 7.653767 AGTAGAACAAAGTGTAACAGCATAC 57.346 36.000 0.00 0.00 41.43 2.39
3168 4931 1.098050 GCCAAGGCATGTCCTGTAAG 58.902 55.000 6.14 1.64 46.94 2.34
3185 4948 8.996024 ACAACACCTAAAATATGTAAAATGCC 57.004 30.769 0.00 0.00 0.00 4.40
3225 4988 4.489306 AGTAATTAGAGTCCTGCCCAAC 57.511 45.455 0.00 0.00 0.00 3.77
3647 5422 1.576421 CTGCTTTCAGGTTCCACGC 59.424 57.895 0.00 0.00 36.68 5.34
3977 5755 3.356290 ACAACACTCCTTGCTTTCTGTT 58.644 40.909 0.00 0.00 0.00 3.16
4126 5910 6.563163 AGATATATTTAGGAACGGAGGGAGT 58.437 40.000 0.00 0.00 0.00 3.85
4127 5911 6.893005 AGAGATATATTTAGGAACGGAGGGAG 59.107 42.308 0.00 0.00 0.00 4.30
4128 5912 6.801953 AGAGATATATTTAGGAACGGAGGGA 58.198 40.000 0.00 0.00 0.00 4.20
4129 5913 7.483580 AAGAGATATATTTAGGAACGGAGGG 57.516 40.000 0.00 0.00 0.00 4.30
4130 5914 8.808092 AGAAAGAGATATATTTAGGAACGGAGG 58.192 37.037 0.00 0.00 0.00 4.30
4150 5934 9.877178 GTAGTCCATTTGAAATCTCTAGAAAGA 57.123 33.333 0.00 0.00 0.00 2.52
4151 5935 9.103861 GGTAGTCCATTTGAAATCTCTAGAAAG 57.896 37.037 0.00 0.00 0.00 2.62
4152 5936 8.602424 TGGTAGTCCATTTGAAATCTCTAGAAA 58.398 33.333 0.00 0.00 39.03 2.52
4153 5937 8.041323 GTGGTAGTCCATTTGAAATCTCTAGAA 58.959 37.037 0.00 0.00 46.20 2.10
4154 5938 7.180229 TGTGGTAGTCCATTTGAAATCTCTAGA 59.820 37.037 0.00 0.00 46.20 2.43
4155 5939 7.331026 TGTGGTAGTCCATTTGAAATCTCTAG 58.669 38.462 0.00 0.00 46.20 2.43
4156 5940 7.252612 TGTGGTAGTCCATTTGAAATCTCTA 57.747 36.000 0.00 0.00 46.20 2.43
4157 5941 6.126863 TGTGGTAGTCCATTTGAAATCTCT 57.873 37.500 0.00 0.00 46.20 3.10
4158 5942 7.254455 CGTATGTGGTAGTCCATTTGAAATCTC 60.254 40.741 0.00 0.00 46.20 2.75
4159 5943 6.538742 CGTATGTGGTAGTCCATTTGAAATCT 59.461 38.462 0.00 0.00 46.20 2.40
4160 5944 6.238374 CCGTATGTGGTAGTCCATTTGAAATC 60.238 42.308 0.00 0.00 46.20 2.17
4161 5945 5.588648 CCGTATGTGGTAGTCCATTTGAAAT 59.411 40.000 0.00 0.00 46.20 2.17
4162 5946 4.938832 CCGTATGTGGTAGTCCATTTGAAA 59.061 41.667 0.00 0.00 46.20 2.69
4163 5947 4.223255 TCCGTATGTGGTAGTCCATTTGAA 59.777 41.667 0.00 0.00 46.20 2.69
4164 5948 3.770388 TCCGTATGTGGTAGTCCATTTGA 59.230 43.478 0.00 0.00 46.20 2.69
4165 5949 4.131649 TCCGTATGTGGTAGTCCATTTG 57.868 45.455 0.00 0.00 46.20 2.32
4166 5950 4.163458 ACATCCGTATGTGGTAGTCCATTT 59.837 41.667 0.00 0.00 44.79 2.32
4167 5951 3.709653 ACATCCGTATGTGGTAGTCCATT 59.290 43.478 0.00 0.00 44.79 3.16
4168 5952 3.305720 ACATCCGTATGTGGTAGTCCAT 58.694 45.455 0.00 0.00 44.79 3.41
4169 5953 2.742348 ACATCCGTATGTGGTAGTCCA 58.258 47.619 0.00 0.00 44.79 4.02
4170 5954 6.770746 ATATACATCCGTATGTGGTAGTCC 57.229 41.667 3.56 0.00 45.99 3.85
4171 5955 8.610896 GTCTATATACATCCGTATGTGGTAGTC 58.389 40.741 3.56 0.00 45.99 2.59
4172 5956 8.105197 TGTCTATATACATCCGTATGTGGTAGT 58.895 37.037 3.56 0.00 45.99 2.73
4173 5957 8.502105 TGTCTATATACATCCGTATGTGGTAG 57.498 38.462 3.56 3.93 45.99 3.18
4175 5959 7.956328 ATGTCTATATACATCCGTATGTGGT 57.044 36.000 3.56 0.00 45.99 4.16
4207 5991 6.073222 ACGGAACAAAATGAGTGAATCTACAC 60.073 38.462 0.00 0.00 40.60 2.90
4208 5992 5.995282 ACGGAACAAAATGAGTGAATCTACA 59.005 36.000 0.00 0.00 0.00 2.74
4209 5993 6.481954 ACGGAACAAAATGAGTGAATCTAC 57.518 37.500 0.00 0.00 0.00 2.59
4210 5994 7.822334 ACATACGGAACAAAATGAGTGAATCTA 59.178 33.333 0.00 0.00 0.00 1.98
4211 5995 6.655003 ACATACGGAACAAAATGAGTGAATCT 59.345 34.615 0.00 0.00 0.00 2.40
4212 5996 6.842163 ACATACGGAACAAAATGAGTGAATC 58.158 36.000 0.00 0.00 0.00 2.52
4213 5997 6.817765 ACATACGGAACAAAATGAGTGAAT 57.182 33.333 0.00 0.00 0.00 2.57
4214 5998 6.932400 ACTACATACGGAACAAAATGAGTGAA 59.068 34.615 0.00 0.00 0.00 3.18
4215 5999 6.460781 ACTACATACGGAACAAAATGAGTGA 58.539 36.000 0.00 0.00 0.00 3.41
4216 6000 6.367695 TGACTACATACGGAACAAAATGAGTG 59.632 38.462 0.00 0.00 0.00 3.51
4217 6001 6.367969 GTGACTACATACGGAACAAAATGAGT 59.632 38.462 0.00 0.00 0.00 3.41
4218 6002 6.590292 AGTGACTACATACGGAACAAAATGAG 59.410 38.462 0.00 0.00 0.00 2.90
4219 6003 6.460781 AGTGACTACATACGGAACAAAATGA 58.539 36.000 0.00 0.00 0.00 2.57
4220 6004 6.721571 AGTGACTACATACGGAACAAAATG 57.278 37.500 0.00 0.00 0.00 2.32
4221 6005 6.708949 ACAAGTGACTACATACGGAACAAAAT 59.291 34.615 0.00 0.00 0.00 1.82
4222 6006 6.050432 ACAAGTGACTACATACGGAACAAAA 58.950 36.000 0.00 0.00 0.00 2.44
4223 6007 5.603596 ACAAGTGACTACATACGGAACAAA 58.396 37.500 0.00 0.00 0.00 2.83
4224 6008 5.204409 ACAAGTGACTACATACGGAACAA 57.796 39.130 0.00 0.00 0.00 2.83
4225 6009 4.859304 ACAAGTGACTACATACGGAACA 57.141 40.909 0.00 0.00 0.00 3.18
4226 6010 5.224888 TCAACAAGTGACTACATACGGAAC 58.775 41.667 0.00 0.00 0.00 3.62
4227 6011 5.456548 TCAACAAGTGACTACATACGGAA 57.543 39.130 0.00 0.00 0.00 4.30
4228 6012 5.456548 TTCAACAAGTGACTACATACGGA 57.543 39.130 0.00 0.00 35.39 4.69
4229 6013 6.721571 ATTTCAACAAGTGACTACATACGG 57.278 37.500 0.00 0.00 35.39 4.02
4230 6014 9.302345 AGATATTTCAACAAGTGACTACATACG 57.698 33.333 0.00 0.00 35.39 3.06
4239 6023 9.996554 TGTCTTTCTAGATATTTCAACAAGTGA 57.003 29.630 0.00 0.00 31.86 3.41
4254 6038 9.595823 CCGTTCCTAAATATTTGTCTTTCTAGA 57.404 33.333 11.05 0.00 0.00 2.43
4255 6039 9.595823 TCCGTTCCTAAATATTTGTCTTTCTAG 57.404 33.333 11.05 0.00 0.00 2.43
4256 6040 9.595823 CTCCGTTCCTAAATATTTGTCTTTCTA 57.404 33.333 11.05 0.00 0.00 2.10
4257 6041 7.553044 CCTCCGTTCCTAAATATTTGTCTTTCT 59.447 37.037 11.05 0.00 0.00 2.52
4258 6042 7.201705 CCCTCCGTTCCTAAATATTTGTCTTTC 60.202 40.741 11.05 0.00 0.00 2.62
4259 6043 6.602009 CCCTCCGTTCCTAAATATTTGTCTTT 59.398 38.462 11.05 0.00 0.00 2.52
4260 6044 6.069847 TCCCTCCGTTCCTAAATATTTGTCTT 60.070 38.462 11.05 0.00 0.00 3.01
4261 6045 5.427481 TCCCTCCGTTCCTAAATATTTGTCT 59.573 40.000 11.05 0.00 0.00 3.41
4262 6046 5.677567 TCCCTCCGTTCCTAAATATTTGTC 58.322 41.667 11.05 0.00 0.00 3.18
4263 6047 5.681639 CTCCCTCCGTTCCTAAATATTTGT 58.318 41.667 11.05 0.00 0.00 2.83
4264 6048 4.515567 GCTCCCTCCGTTCCTAAATATTTG 59.484 45.833 11.05 1.40 0.00 2.32
4265 6049 4.165372 TGCTCCCTCCGTTCCTAAATATTT 59.835 41.667 5.89 5.89 0.00 1.40
4266 6050 3.714798 TGCTCCCTCCGTTCCTAAATATT 59.285 43.478 0.00 0.00 0.00 1.28
4267 6051 3.314693 TGCTCCCTCCGTTCCTAAATAT 58.685 45.455 0.00 0.00 0.00 1.28
4268 6052 2.698797 CTGCTCCCTCCGTTCCTAAATA 59.301 50.000 0.00 0.00 0.00 1.40
4269 6053 1.486726 CTGCTCCCTCCGTTCCTAAAT 59.513 52.381 0.00 0.00 0.00 1.40
4270 6054 0.902531 CTGCTCCCTCCGTTCCTAAA 59.097 55.000 0.00 0.00 0.00 1.85
4271 6055 0.040646 TCTGCTCCCTCCGTTCCTAA 59.959 55.000 0.00 0.00 0.00 2.69
4272 6056 0.261991 ATCTGCTCCCTCCGTTCCTA 59.738 55.000 0.00 0.00 0.00 2.94
4273 6057 1.002274 ATCTGCTCCCTCCGTTCCT 59.998 57.895 0.00 0.00 0.00 3.36
4274 6058 1.144936 CATCTGCTCCCTCCGTTCC 59.855 63.158 0.00 0.00 0.00 3.62
4275 6059 0.460987 CACATCTGCTCCCTCCGTTC 60.461 60.000 0.00 0.00 0.00 3.95
4276 6060 1.194781 ACACATCTGCTCCCTCCGTT 61.195 55.000 0.00 0.00 0.00 4.44
4277 6061 0.324368 TACACATCTGCTCCCTCCGT 60.324 55.000 0.00 0.00 0.00 4.69
4278 6062 1.043816 ATACACATCTGCTCCCTCCG 58.956 55.000 0.00 0.00 0.00 4.63
4279 6063 2.843701 CAATACACATCTGCTCCCTCC 58.156 52.381 0.00 0.00 0.00 4.30
4280 6064 2.158842 AGCAATACACATCTGCTCCCTC 60.159 50.000 0.00 0.00 42.73 4.30
4281 6065 1.842562 AGCAATACACATCTGCTCCCT 59.157 47.619 0.00 0.00 42.73 4.20
4282 6066 1.945394 CAGCAATACACATCTGCTCCC 59.055 52.381 0.00 0.00 44.46 4.30
4283 6067 2.611292 GACAGCAATACACATCTGCTCC 59.389 50.000 0.00 0.00 44.46 4.70
4284 6068 3.264947 TGACAGCAATACACATCTGCTC 58.735 45.455 0.00 0.00 44.46 4.26
4286 6070 3.302935 CGATGACAGCAATACACATCTGC 60.303 47.826 0.00 0.00 36.31 4.26
4287 6071 3.302935 GCGATGACAGCAATACACATCTG 60.303 47.826 0.00 0.00 36.31 2.90
4335 6119 7.550906 AGCAGAAATCAGTTAAGAGTCAATACC 59.449 37.037 0.00 0.00 0.00 2.73
4466 6250 5.361285 CAGAGTATTTGCAGGACTAGGTACT 59.639 44.000 0.00 0.00 46.37 2.73
4601 6385 2.156496 TTTCCCCTGCCGGCCATTTA 62.156 55.000 26.77 2.93 0.00 1.40
4763 6547 6.327626 AGACATGGACCTAACACTATAGCAAT 59.672 38.462 0.00 0.00 0.00 3.56
4779 6563 1.594862 GCACGATTAGCAGACATGGAC 59.405 52.381 0.00 0.00 0.00 4.02
4884 6668 3.195698 GGTCCGAACAGATGCGGC 61.196 66.667 0.00 0.00 46.79 6.53
4909 6693 2.112297 GGCTTTGGGTGTCGGACA 59.888 61.111 6.76 6.76 0.00 4.02
4910 6694 2.671963 GGGCTTTGGGTGTCGGAC 60.672 66.667 0.00 0.00 0.00 4.79
4913 6697 3.920093 GAGGGGGCTTTGGGTGTCG 62.920 68.421 0.00 0.00 0.00 4.35
4914 6698 2.035783 GAGGGGGCTTTGGGTGTC 59.964 66.667 0.00 0.00 0.00 3.67
4915 6699 3.590574 GGAGGGGGCTTTGGGTGT 61.591 66.667 0.00 0.00 0.00 4.16
4998 7241 1.286570 CGCTGCTTCAATGCCAACA 59.713 52.632 0.00 0.00 0.00 3.33
5020 7263 1.538666 GGCAATGACTATGGCCCCT 59.461 57.895 0.00 0.00 46.18 4.79
5024 7267 2.555547 GGCCGGCAATGACTATGGC 61.556 63.158 30.85 1.22 41.72 4.40
5026 7269 0.751277 TTGGGCCGGCAATGACTATG 60.751 55.000 30.85 0.00 0.00 2.23
5027 7270 0.033601 TTTGGGCCGGCAATGACTAT 60.034 50.000 30.85 0.00 0.00 2.12
5028 7271 0.679640 CTTTGGGCCGGCAATGACTA 60.680 55.000 30.85 4.95 0.00 2.59
5029 7272 1.978617 CTTTGGGCCGGCAATGACT 60.979 57.895 30.85 0.00 0.00 3.41
5030 7273 2.275380 ACTTTGGGCCGGCAATGAC 61.275 57.895 30.85 10.33 0.00 3.06
5031 7274 2.117206 ACTTTGGGCCGGCAATGA 59.883 55.556 30.85 10.30 0.00 2.57
5032 7275 2.262292 CACTTTGGGCCGGCAATG 59.738 61.111 30.85 18.65 0.00 2.82
5033 7276 2.803593 ATCCACTTTGGGCCGGCAAT 62.804 55.000 30.85 2.80 38.32 3.56
5034 7277 3.521765 ATCCACTTTGGGCCGGCAA 62.522 57.895 30.85 12.67 38.32 4.52
5054 7297 0.111446 TGCCGGATCCAAAAAGGTCA 59.889 50.000 13.41 4.37 39.02 4.02
5060 7303 1.204467 GCTTCAATGCCGGATCCAAAA 59.796 47.619 13.41 0.00 0.00 2.44
5107 7350 1.659233 CATGCACCGAAAACCAGCA 59.341 52.632 0.00 0.00 39.79 4.41
5112 7355 2.804931 GGCGCATGCACCGAAAAC 60.805 61.111 19.57 0.00 45.35 2.43
5126 7369 2.504244 GAACACGGAGAGACGGCG 60.504 66.667 4.80 4.80 38.39 6.46
5128 7371 2.933495 TAATGAACACGGAGAGACGG 57.067 50.000 0.00 0.00 38.39 4.79
5185 7430 3.018856 ACGAACAGGTGACGGTCATATA 58.981 45.455 14.78 0.00 37.98 0.86
5200 7445 1.280746 GTCGACAGACGGACGAACA 59.719 57.895 11.55 0.00 42.82 3.18
5234 7479 2.119147 CTACTCGAGATCCGCCGGTG 62.119 65.000 21.68 8.42 38.37 4.94
5273 7518 3.140895 CCCTTGTTCCCCATTGATCCTAT 59.859 47.826 0.00 0.00 0.00 2.57
5356 7602 8.579850 ACCATACACATCAAATACAATCAAGT 57.420 30.769 0.00 0.00 0.00 3.16
5437 7683 2.418197 GCTAGAGCAACGTCCAATACCA 60.418 50.000 0.00 0.00 41.59 3.25
5473 7719 7.847848 AGTAGGGTGTCTATATAAACCAAAGGA 59.152 37.037 9.83 0.00 34.18 3.36
5495 7741 3.677976 CGCCTGTAACCCTAAACCAGTAG 60.678 52.174 0.00 0.00 0.00 2.57
5496 7742 2.234414 CGCCTGTAACCCTAAACCAGTA 59.766 50.000 0.00 0.00 0.00 2.74
5497 7743 1.002773 CGCCTGTAACCCTAAACCAGT 59.997 52.381 0.00 0.00 0.00 4.00
5498 7744 1.276989 TCGCCTGTAACCCTAAACCAG 59.723 52.381 0.00 0.00 0.00 4.00
5499 7745 1.350071 TCGCCTGTAACCCTAAACCA 58.650 50.000 0.00 0.00 0.00 3.67
5502 7748 1.137479 CCGATCGCCTGTAACCCTAAA 59.863 52.381 10.32 0.00 0.00 1.85
5533 7779 6.715280 AGTCAAGATTAGGCAAGATCTTTCA 58.285 36.000 4.86 0.00 39.83 2.69
5542 7788 3.308402 CCCTCCAAGTCAAGATTAGGCAA 60.308 47.826 0.00 0.00 0.00 4.52
5683 7929 0.617820 GGCTACCAAGGGAGTCCTGA 60.618 60.000 9.58 0.00 44.07 3.86
5696 7942 0.691413 AGGCTAGTTCAGGGGCTACC 60.691 60.000 0.00 0.00 40.67 3.18
5717 7963 0.323360 GGACACAAGCCCTGGCATTA 60.323 55.000 11.38 0.00 44.88 1.90


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.